NA29_RS06400 8e6e88ba313cee07490affb3727c2459 594 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 556 1.1E-72 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NA29_RS06400 8e6e88ba313cee07490affb3727c2459 594 Gene3D G3DSA:3.90.1310.10 140 240 4.2E-29 T 09-03-2017 NA29_RS06400 8e6e88ba313cee07490affb3727c2459 594 Pfam PF03717 Penicillin-binding Protein dimerisation domain 71 218 2.3E-14 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 NA29_RS06400 8e6e88ba313cee07490affb3727c2459 594 SUPERFAMILY SSF56519 68 233 5.89E-40 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 NA29_RS06400 8e6e88ba313cee07490affb3727c2459 594 Gene3D G3DSA:3.40.710.10 241 563 4.8E-83 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS06400 8e6e88ba313cee07490affb3727c2459 594 SUPERFAMILY SSF56601 186 586 2.32E-87 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS18405 e8dfdc68ec3f173df6945c4bb9c9a961 365 Gene3D G3DSA:3.40.430.10 135 361 1.3E-73 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 NA29_RS18405 e8dfdc68ec3f173df6945c4bb9c9a961 365 Pfam PF01872 RibD C-terminal domain 153 355 8.8E-48 T 09-03-2017 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 NA29_RS18405 e8dfdc68ec3f173df6945c4bb9c9a961 365 SUPERFAMILY SSF53597 151 361 3.93E-57 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 NA29_RS18405 e8dfdc68ec3f173df6945c4bb9c9a961 365 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 152 361 7.6E-56 T 09-03-2017 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 NA29_RS18405 e8dfdc68ec3f173df6945c4bb9c9a961 365 SUPERFAMILY SSF53927 6 150 1.95E-48 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 NA29_RS18405 e8dfdc68ec3f173df6945c4bb9c9a961 365 Gene3D G3DSA:3.40.140.10 6 134 2.3E-36 T 09-03-2017 NA29_RS18405 e8dfdc68ec3f173df6945c4bb9c9a961 365 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 356 9.5E-118 T 09-03-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 NA29_RS18405 e8dfdc68ec3f173df6945c4bb9c9a961 365 PIRSF PIRSF006769 1 364 2.1E-121 T 09-03-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 NA29_RS18405 e8dfdc68ec3f173df6945c4bb9c9a961 365 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 105 1.0E-20 T 09-03-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 NA29_RS18405 e8dfdc68ec3f173df6945c4bb9c9a961 365 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 94 - T 09-03-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 Gene3D G3DSA:1.20.210.10 47 578 3.7E-185 T 09-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 286 340 - T 09-03-2017 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 62 509 1.5E-135 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 8 652 0.0 T 09-03-2017 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 SUPERFAMILY SSF81442 49 566 4.06E-177 T 09-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 130 154 6.9E-95 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 172 184 6.9E-95 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 354 375 6.9E-95 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 467 488 6.9E-95 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 389 407 6.9E-95 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 233 252 6.9E-95 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 204 222 6.9E-95 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 53 78 6.9E-95 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 103 126 6.9E-95 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 330 345 6.9E-95 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 284 305 6.9E-95 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18960 a934085991b919d2af606af25cafa9f0 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 417 436 6.9E-95 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS03865 3c24b47cd65d1f9f75e8c946ce6cb6ac 307 Pfam PF01614 Bacterial transcriptional regulator 149 272 2.1E-28 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS03865 3c24b47cd65d1f9f75e8c946ce6cb6ac 307 SUPERFAMILY SSF55781 103 278 3.47E-48 T 09-03-2017 IPR029016 GAF domain-like NA29_RS03865 3c24b47cd65d1f9f75e8c946ce6cb6ac 307 Pfam PF09339 IclR helix-turn-helix domain 32 78 3.9E-10 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS03865 3c24b47cd65d1f9f75e8c946ce6cb6ac 307 Gene3D G3DSA:3.30.450.40 105 279 3.5E-55 T 09-03-2017 IPR029016 GAF domain-like NA29_RS03865 3c24b47cd65d1f9f75e8c946ce6cb6ac 307 SUPERFAMILY SSF46785 32 102 4.75E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03865 3c24b47cd65d1f9f75e8c946ce6cb6ac 307 Gene3D G3DSA:1.10.10.10 32 83 1.8E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03865 3c24b47cd65d1f9f75e8c946ce6cb6ac 307 SMART SM00346 28 121 3.5E-6 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS00505 6990a939d018d924d836fe76a1d86db6 335 Pfam PF01339 CheB methylesterase 152 328 9.5E-56 T 09-03-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NA29_RS00505 6990a939d018d924d836fe76a1d86db6 335 SUPERFAMILY SSF52738 148 332 1.96E-59 T 09-03-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NA29_RS00505 6990a939d018d924d836fe76a1d86db6 335 PIRSF PIRSF000876 1 335 2.8E-99 T 09-03-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NA29_RS00505 6990a939d018d924d836fe76a1d86db6 335 SMART SM00448 1 115 4.4E-15 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS00505 6990a939d018d924d836fe76a1d86db6 335 Pfam PF00072 Response regulator receiver domain 4 105 1.7E-15 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS00505 6990a939d018d924d836fe76a1d86db6 335 Gene3D G3DSA:3.40.50.2300 1 130 1.2E-23 T 09-03-2017 NA29_RS00505 6990a939d018d924d836fe76a1d86db6 335 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 1 333 32.014 T 09-03-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NA29_RS00505 6990a939d018d924d836fe76a1d86db6 335 SUPERFAMILY SSF52172 1 127 2.13E-22 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS00505 6990a939d018d924d836fe76a1d86db6 335 Gene3D G3DSA:3.40.50.180 147 333 1.8E-67 T 09-03-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 SUPERFAMILY SSF50249 455 543 3.21E-20 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 SUPERFAMILY SSF50249 196 284 1.29E-27 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 PRINTS PR00681 Ribosomal protein S1 signature 28 46 1.0E-81 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 PRINTS PR00681 Ribosomal protein S1 signature 219 240 1.0E-81 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 PRINTS PR00681 Ribosomal protein S1 signature 91 110 1.0E-81 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 PRINTS PR00681 Ribosomal protein S1 signature 133 150 1.0E-81 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 PRINTS PR00681 Ribosomal protein S1 signature 162 182 1.0E-81 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 PRINTS PR00681 Ribosomal protein S1 signature 337 355 1.0E-81 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 PRINTS PR00681 Ribosomal protein S1 signature 46 60 1.0E-81 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 PRINTS PR00681 Ribosomal protein S1 signature 115 131 1.0E-81 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 PRINTS PR00681 Ribosomal protein S1 signature 297 316 1.0E-81 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 SUPERFAMILY SSF50249 110 191 1.33E-15 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 Pfam PF00575 S1 RNA binding domain 283 354 2.4E-21 T 09-03-2017 IPR003029 S1 domain GO:0003676 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 Pfam PF00575 S1 RNA binding domain 196 267 3.2E-23 T 09-03-2017 IPR003029 S1 domain GO:0003676 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 Pfam PF00575 S1 RNA binding domain 368 441 1.4E-19 T 09-03-2017 IPR003029 S1 domain GO:0003676 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 Pfam PF00575 S1 RNA binding domain 26 92 8.7E-6 T 09-03-2017 IPR003029 S1 domain GO:0003676 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 Pfam PF00575 S1 RNA binding domain 455 527 1.2E-15 T 09-03-2017 IPR003029 S1 domain GO:0003676 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 Pfam PF00575 S1 RNA binding domain 110 178 2.1E-13 T 09-03-2017 IPR003029 S1 domain GO:0003676 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 SUPERFAMILY SSF50249 354 444 1.34E-21 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 Gene3D G3DSA:2.40.50.140 109 179 3.2E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 Gene3D G3DSA:2.40.50.140 451 528 3.6E-22 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 PIRSF PIRSF002111 1 541 2.5E-216 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 10 527 3.4E-207 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 Gene3D G3DSA:2.40.50.140 370 450 8.3E-26 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 SUPERFAMILY SSF50249 262 361 1.22E-26 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 SMART SM00316 26 94 0.19 T 09-03-2017 IPR022967 RNA-binding domain, S1 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 SMART SM00316 110 178 3.8E-11 T 09-03-2017 IPR022967 RNA-binding domain, S1 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 SMART SM00316 197 267 1.3E-29 T 09-03-2017 IPR022967 RNA-binding domain, S1 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 SMART SM00316 282 354 1.3E-24 T 09-03-2017 IPR022967 RNA-binding domain, S1 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 SMART SM00316 456 527 5.2E-21 T 09-03-2017 IPR022967 RNA-binding domain, S1 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 SMART SM00316 369 441 1.3E-21 T 09-03-2017 IPR022967 RNA-binding domain, S1 NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 SUPERFAMILY SSF50249 12 120 7.09E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 Gene3D G3DSA:2.40.50.140 28 108 1.2E-8 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 Gene3D G3DSA:2.40.50.140 288 369 5.2E-30 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS17815 e25f40e670efa511564eb1749e5f91e9 567 Gene3D G3DSA:2.40.50.140 199 285 3.0E-31 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS23900 fa61e687c312ce7e905ff7dda6061de4 464 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 87 8.5E-11 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS23900 fa61e687c312ce7e905ff7dda6061de4 464 SUPERFAMILY SSF46785 20 97 2.33E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS23900 fa61e687c312ce7e905ff7dda6061de4 464 Pfam PF00155 Aminotransferase class I and II 98 448 3.4E-11 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS23900 fa61e687c312ce7e905ff7dda6061de4 464 SUPERFAMILY SSF53383 76 454 2.78E-68 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS23900 fa61e687c312ce7e905ff7dda6061de4 464 Gene3D G3DSA:3.40.640.10 129 349 3.8E-46 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS23900 fa61e687c312ce7e905ff7dda6061de4 464 Gene3D G3DSA:1.10.10.10 21 88 6.6E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS23900 fa61e687c312ce7e905ff7dda6061de4 464 SMART SM00345 28 87 1.6E-8 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS15085 fb5d8c7c5f31a6107e99908334dc5004 122 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 76 3.3E-27 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 NA29_RS15085 fb5d8c7c5f31a6107e99908334dc5004 122 PRINTS PR01651 Protein-export SecG membrane protein signature 26 40 3.2E-36 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 NA29_RS15085 fb5d8c7c5f31a6107e99908334dc5004 122 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 3.2E-36 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 NA29_RS15085 fb5d8c7c5f31a6107e99908334dc5004 122 PRINTS PR01651 Protein-export SecG membrane protein signature 41 57 3.2E-36 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 NA29_RS15085 fb5d8c7c5f31a6107e99908334dc5004 122 PRINTS PR01651 Protein-export SecG membrane protein signature 57 79 3.2E-36 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 NA29_RS15085 fb5d8c7c5f31a6107e99908334dc5004 122 Pfam PF03840 Preprotein translocase SecG subunit 7 76 6.1E-23 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 NA29_RS22030 a5b1dda881a617498ad67d27f5bb0337 351 Gene3D G3DSA:2.40.160.10 23 351 1.4E-78 T 09-03-2017 IPR023614 Porin domain NA29_RS22030 a5b1dda881a617498ad67d27f5bb0337 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 191 203 9.7E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS22030 a5b1dda881a617498ad67d27f5bb0337 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 56 67 9.7E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS22030 a5b1dda881a617498ad67d27f5bb0337 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 100 110 9.7E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS22030 a5b1dda881a617498ad67d27f5bb0337 351 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 296 313 9.7E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS22030 a5b1dda881a617498ad67d27f5bb0337 351 PRINTS PR00184 Neisseria sp. porin signature 58 83 1.7E-9 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS22030 a5b1dda881a617498ad67d27f5bb0337 351 PRINTS PR00184 Neisseria sp. porin signature 224 250 1.7E-9 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS22030 a5b1dda881a617498ad67d27f5bb0337 351 SUPERFAMILY SSF56935 22 351 1.31E-70 T 09-03-2017 NA29_RS22030 a5b1dda881a617498ad67d27f5bb0337 351 Pfam PF13609 Gram-negative porin 9 321 2.7E-38 T 09-03-2017 NA29_RS07985 7202bc1e78d314629de59b2779b33734 627 SMART SM00493 261 332 9.3E-13 T 09-03-2017 IPR006171 Toprim domain NA29_RS07985 7202bc1e78d314629de59b2779b33734 627 Gene3D G3DSA:3.90.980.10 116 242 1.1E-43 T 09-03-2017 IPR013264 DNA primase, catalytic core, N-terminal NA29_RS07985 7202bc1e78d314629de59b2779b33734 627 Pfam PF10410 DnaB-helicase binding domain of primase 371 424 1.0E-9 T 09-03-2017 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 NA29_RS07985 7202bc1e78d314629de59b2779b33734 627 Pfam PF13662 Toprim domain 263 329 2.8E-15 T 09-03-2017 IPR006171 Toprim domain NA29_RS07985 7202bc1e78d314629de59b2779b33734 627 PIRSF PIRSF002811 1 615 2.4E-142 T 09-03-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 NA29_RS07985 7202bc1e78d314629de59b2779b33734 627 TIGRFAM TIGR01391 dnaG: DNA primase 2 420 1.3E-137 T 09-03-2017 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 NA29_RS07985 7202bc1e78d314629de59b2779b33734 627 SMART SM00400 33 87 2.8E-36 T 09-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NA29_RS07985 7202bc1e78d314629de59b2779b33734 627 SUPERFAMILY SSF56731 116 425 5.36E-101 T 09-03-2017 NA29_RS07985 7202bc1e78d314629de59b2779b33734 627 Gene3D G3DSA:3.40.1360.10 243 368 5.1E-42 T 09-03-2017 NA29_RS07985 7202bc1e78d314629de59b2779b33734 627 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 253 2.5E-38 T 09-03-2017 IPR013264 DNA primase, catalytic core, N-terminal NA29_RS07985 7202bc1e78d314629de59b2779b33734 627 SUPERFAMILY SSF57783 2 97 4.08E-37 T 09-03-2017 NA29_RS07985 7202bc1e78d314629de59b2779b33734 627 Gene3D G3DSA:1.20.50.20 370 427 2.8E-16 T 09-03-2017 NA29_RS07985 7202bc1e78d314629de59b2779b33734 627 Hamap MF_00974 DNA primase [dnaG]. 1 607 28.188 T 09-03-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 NA29_RS07985 7202bc1e78d314629de59b2779b33734 627 Gene3D G3DSA:3.90.580.10 2 97 2.7E-40 T 09-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NA29_RS07985 7202bc1e78d314629de59b2779b33734 627 Pfam PF01807 CHC2 zinc finger 3 97 9.7E-40 T 09-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 NA29_RS11625 47a460b3cbf46ff4c17991e97b1239f7 395 Gene3D G3DSA:3.30.1540.10 219 302 8.3E-24 T 09-03-2017 NA29_RS11625 47a460b3cbf46ff4c17991e97b1239f7 395 Pfam PF02515 CoA-transferase family III 4 372 2.4E-110 T 09-03-2017 IPR003673 CoA-transferase family III GO:0003824 NA29_RS11625 47a460b3cbf46ff4c17991e97b1239f7 395 SUPERFAMILY SSF89796 1 395 2.35E-125 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS11625 47a460b3cbf46ff4c17991e97b1239f7 395 Gene3D G3DSA:3.40.50.10540 2 213 2.0E-99 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS11625 47a460b3cbf46ff4c17991e97b1239f7 395 Gene3D G3DSA:3.40.50.10540 303 395 2.0E-99 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS13330 d517a96faf74633756853761083700b8 646 SUPERFAMILY SSF52540 297 518 1.65E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13330 d517a96faf74633756853761083700b8 646 SUPERFAMILY SSF52540 119 255 1.3E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13330 d517a96faf74633756853761083700b8 646 SUPERFAMILY SSF52540 2 92 1.3E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13330 d517a96faf74633756853761083700b8 646 SMART SM00382 342 509 6.4E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS13330 d517a96faf74633756853761083700b8 646 SMART SM00382 26 225 4.8E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS13330 d517a96faf74633756853761083700b8 646 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS13330 d517a96faf74633756853761083700b8 646 Gene3D G3DSA:3.40.50.300 2 275 3.2E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13330 d517a96faf74633756853761083700b8 646 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS13330 d517a96faf74633756853761083700b8 646 Pfam PF12848 ABC transporter 217 292 5.5E-28 T 09-03-2017 IPR032781 ABC-transporter extension domain NA29_RS13330 d517a96faf74633756853761083700b8 646 Gene3D G3DSA:3.40.50.300 310 522 1.2E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13330 d517a96faf74633756853761083700b8 646 Pfam PF00005 ABC transporter 18 178 1.2E-20 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS13330 d517a96faf74633756853761083700b8 646 Pfam PF00005 ABC transporter 335 464 4.9E-22 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS12840 94df94c0c2e727e1f828a03a36d3c346 160 SUPERFAMILY SSF46955 1 127 1.54E-35 T 09-03-2017 IPR009061 Putative DNA-binding domain NA29_RS12840 94df94c0c2e727e1f828a03a36d3c346 160 Gene3D G3DSA:1.10.1660.10 1 54 1.0E-23 T 09-03-2017 NA29_RS12840 94df94c0c2e727e1f828a03a36d3c346 160 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.0E-11 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS12840 94df94c0c2e727e1f828a03a36d3c346 160 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.0E-11 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS12840 94df94c0c2e727e1f828a03a36d3c346 160 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.0E-11 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS12840 94df94c0c2e727e1f828a03a36d3c346 160 SMART SM00422 1 70 8.1E-28 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS12840 94df94c0c2e727e1f828a03a36d3c346 160 Pfam PF13411 MerR HTH family regulatory protein 1 66 7.4E-19 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS12840 94df94c0c2e727e1f828a03a36d3c346 160 Gene3D G3DSA:1.10.1660.10 55 133 4.1E-22 T 09-03-2017 NA29_RS17345 c21499150fdd96f590c5ccc5c7667639 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 2.3E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS17345 c21499150fdd96f590c5ccc5c7667639 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 2.3E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS17345 c21499150fdd96f590c5ccc5c7667639 249 SMART SM00895 109 230 5.3E-14 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS17345 c21499150fdd96f590c5ccc5c7667639 249 Gene3D G3DSA:1.20.120.530 107 238 4.3E-21 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS17345 c21499150fdd96f590c5ccc5c7667639 249 SUPERFAMILY SSF46785 15 79 4.66E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17345 c21499150fdd96f590c5ccc5c7667639 249 Gene3D G3DSA:1.10.10.10 8 79 2.5E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17345 c21499150fdd96f590c5ccc5c7667639 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 79 5.4E-17 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS17345 c21499150fdd96f590c5ccc5c7667639 249 Pfam PF07729 FCD domain 109 226 5.8E-20 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS17345 c21499150fdd96f590c5ccc5c7667639 249 SUPERFAMILY SSF48008 107 237 7.32E-20 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS17345 c21499150fdd96f590c5ccc5c7667639 249 SMART SM00345 23 84 5.8E-14 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS24675 d48420ee67d41b619a10353ee3b7405c 702 Gene3D G3DSA:3.40.50.300 194 291 1.6E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24675 d48420ee67d41b619a10353ee3b7405c 702 Gene3D G3DSA:3.40.50.300 5 119 1.6E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24675 d48420ee67d41b619a10353ee3b7405c 702 SUPERFAMILY SSF52540 4 661 5.77E-154 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24675 d48420ee67d41b619a10353ee3b7405c 702 Pfam PF13361 UvrD-like helicase C-terminal domain 283 641 3.1E-61 T 09-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 NA29_RS24675 d48420ee67d41b619a10353ee3b7405c 702 Gene3D G3DSA:1.10.486.10 395 562 5.4E-37 T 09-03-2017 NA29_RS24675 d48420ee67d41b619a10353ee3b7405c 702 Pfam PF00580 UvrD/REP helicase N-terminal domain 139 277 5.3E-35 T 09-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NA29_RS24675 d48420ee67d41b619a10353ee3b7405c 702 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 128 1.3E-36 T 09-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NA29_RS24675 d48420ee67d41b619a10353ee3b7405c 702 Gene3D G3DSA:3.40.50.300 292 394 4.4E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24675 d48420ee67d41b619a10353ee3b7405c 702 Gene3D G3DSA:3.40.50.300 575 662 4.4E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24675 d48420ee67d41b619a10353ee3b7405c 702 Gene3D G3DSA:1.10.10.160 123 193 5.1E-16 T 09-03-2017 IPR013986 DExx box DNA helicase domain NA29_RS24675 d48420ee67d41b619a10353ee3b7405c 702 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 4 690 38.683 T 09-03-2017 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 NA29_RS21880 a6543b361826dcf1cab021d428a2ea7e 420 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 420 36.874 T 09-03-2017 IPR006698 Uncharacterised protein family UPF0229 NA29_RS21880 a6543b361826dcf1cab021d428a2ea7e 420 SUPERFAMILY SSF53300 250 350 1.58E-5 T 09-03-2017 IPR002035 von Willebrand factor, type A NA29_RS21880 a6543b361826dcf1cab021d428a2ea7e 420 Pfam PF04285 Protein of unknown function (DUF444) 4 418 2.5E-176 T 09-03-2017 IPR006698 Uncharacterised protein family UPF0229 NA29_RS14460 fcfc00ace67f72f669811c35e25111cd 253 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 250 38.856 T 09-03-2017 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NA29_RS14460 fcfc00ace67f72f669811c35e25111cd 253 SUPERFAMILY SSF64167 1 247 3.14E-86 T 09-03-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NA29_RS14460 fcfc00ace67f72f669811c35e25111cd 253 Gene3D G3DSA:3.40.1210.10 1 245 1.6E-86 T 09-03-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NA29_RS14460 fcfc00ace67f72f669811c35e25111cd 253 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 233 2.3E-63 T 09-03-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NA29_RS14460 fcfc00ace67f72f669811c35e25111cd 253 Pfam PF01975 Survival protein SurE 3 183 3.3E-56 T 09-03-2017 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 NA29_RS05330 64ad7c30105143aa14363efd7010221c 420 SUPERFAMILY SSF46626 195 304 9.43E-13 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS05330 64ad7c30105143aa14363efd7010221c 420 Gene3D G3DSA:1.10.760.10 47 148 1.7E-15 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS05330 64ad7c30105143aa14363efd7010221c 420 Gene3D G3DSA:1.10.760.10 190 295 4.2E-6 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS05330 64ad7c30105143aa14363efd7010221c 420 PRINTS PR00605 Class IC cytochrome C signature 376 398 6.4E-5 T 09-03-2017 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 NA29_RS05330 64ad7c30105143aa14363efd7010221c 420 PRINTS PR00605 Class IC cytochrome C signature 323 334 6.4E-5 T 09-03-2017 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 NA29_RS05330 64ad7c30105143aa14363efd7010221c 420 Pfam PF00034 Cytochrome c 50 149 1.8E-8 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS05330 64ad7c30105143aa14363efd7010221c 420 PIRSF PIRSF000018 16 420 1.3E-122 T 09-03-2017 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 NA29_RS05330 64ad7c30105143aa14363efd7010221c 420 SUPERFAMILY SSF46626 37 170 3.62E-24 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS05330 64ad7c30105143aa14363efd7010221c 420 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 315 398 1.5E-7 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS05330 64ad7c30105143aa14363efd7010221c 420 SUPERFAMILY SSF46626 316 418 5.73E-16 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS05330 64ad7c30105143aa14363efd7010221c 420 Gene3D G3DSA:1.10.760.10 307 419 5.4E-17 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS02430 86a09340787556a954cb6988624b9fc3 518 Pfam PF03572 Peptidase family S41 200 380 6.6E-54 T 09-03-2017 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 NA29_RS02430 86a09340787556a954cb6988624b9fc3 518 Gene3D G3DSA:2.30.42.10 108 183 2.2E-29 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS02430 86a09340787556a954cb6988624b9fc3 518 Gene3D G3DSA:3.30.750.44 53 107 2.1E-10 T 09-03-2017 NA29_RS02430 86a09340787556a954cb6988624b9fc3 518 SUPERFAMILY SSF52096 38 119 2.15E-77 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS02430 86a09340787556a954cb6988624b9fc3 518 SUPERFAMILY SSF52096 193 385 2.15E-77 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS02430 86a09340787556a954cb6988624b9fc3 518 SUPERFAMILY SSF50156 90 184 3.46E-22 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS02430 86a09340787556a954cb6988624b9fc3 518 Pfam PF13180 PDZ domain 101 180 6.4E-16 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS02430 86a09340787556a954cb6988624b9fc3 518 Gene3D G3DSA:3.90.226.10 184 383 1.7E-65 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS02430 86a09340787556a954cb6988624b9fc3 518 Gene3D G3DSA:3.90.226.10 449 475 1.7E-65 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS02430 86a09340787556a954cb6988624b9fc3 518 SMART SM00245 174 381 4.4E-58 T 09-03-2017 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 NA29_RS02430 86a09340787556a954cb6988624b9fc3 518 SMART SM00228 101 172 1.2E-19 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS02430 86a09340787556a954cb6988624b9fc3 518 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 54 383 3.6E-98 T 09-03-2017 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 NA29_RS15375 91bd31542dd761c9b8140a2d0d7281da 399 Gene3D G3DSA:3.40.640.10 48 317 1.2E-104 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS15375 91bd31542dd761c9b8140a2d0d7281da 399 PRINTS PR00799 Aspartate aminotransferase signature 343 361 6.0E-40 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 NA29_RS15375 91bd31542dd761c9b8140a2d0d7281da 399 PRINTS PR00799 Aspartate aminotransferase signature 208 220 6.0E-40 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 NA29_RS15375 91bd31542dd761c9b8140a2d0d7281da 399 PRINTS PR00799 Aspartate aminotransferase signature 177 196 6.0E-40 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 NA29_RS15375 91bd31542dd761c9b8140a2d0d7281da 399 PRINTS PR00799 Aspartate aminotransferase signature 275 300 6.0E-40 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 NA29_RS15375 91bd31542dd761c9b8140a2d0d7281da 399 Pfam PF00155 Aminotransferase class I and II 28 394 6.7E-81 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS15375 91bd31542dd761c9b8140a2d0d7281da 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 09-03-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 NA29_RS15375 91bd31542dd761c9b8140a2d0d7281da 399 SUPERFAMILY SSF53383 1 399 1.41E-120 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS01485 b4403d48e5159228ff840517e0dc97d4 337 Gene3D G3DSA:2.40.100.10 179 303 5.2E-7 T 09-03-2017 IPR029000 Cyclophilin-like domain NA29_RS01485 b4403d48e5159228ff840517e0dc97d4 337 SMART SM00797 23 308 3.2E-136 T 09-03-2017 IPR003778 Carboxyltransferase domain, subdomain A and B NA29_RS01485 b4403d48e5159228ff840517e0dc97d4 337 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 2 316 1.9E-102 T 09-03-2017 IPR003778 Carboxyltransferase domain, subdomain A and B NA29_RS01485 b4403d48e5159228ff840517e0dc97d4 337 SUPERFAMILY SSF50891 180 297 1.25E-13 T 09-03-2017 IPR029000 Cyclophilin-like domain NA29_RS01485 b4403d48e5159228ff840517e0dc97d4 337 Pfam PF02626 Allophanate hydrolase subunit 2 24 291 6.9E-96 T 09-03-2017 IPR003778 Carboxyltransferase domain, subdomain A and B NA29_RS06340 2293bd5cc064de1f6b058a180fcce2ff 70 Hamap MF_00715 Protein SlyX [slyX]. 3 70 14.792 T 09-03-2017 IPR007236 SlyX NA29_RS06340 2293bd5cc064de1f6b058a180fcce2ff 70 Gene3D G3DSA:1.20.5.300 2 49 1.3E-15 T 09-03-2017 NA29_RS06340 2293bd5cc064de1f6b058a180fcce2ff 70 Pfam PF04102 SlyX 4 70 2.0E-24 T 09-03-2017 IPR007236 SlyX NA29_RS01120 2f6eddba0f6203bde5510a66fd6e6499 452 Gene3D G3DSA:3.40.50.300 3 110 1.7E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01120 2f6eddba0f6203bde5510a66fd6e6499 452 Gene3D G3DSA:3.40.50.300 254 340 1.7E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01120 2f6eddba0f6203bde5510a66fd6e6499 452 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 344 414 7.1E-6 T 09-03-2017 IPR019489 Clp ATPase, C-terminal NA29_RS01120 2f6eddba0f6203bde5510a66fd6e6499 452 SMART SM00382 49 341 1.3E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS01120 2f6eddba0f6203bde5510a66fd6e6499 452 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 100 4.5E-6 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 NA29_RS01120 2f6eddba0f6203bde5510a66fd6e6499 452 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 452 42.937 T 09-03-2017 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 NA29_RS01120 2f6eddba0f6203bde5510a66fd6e6499 452 SMART SM01086 344 434 1.2E-16 T 09-03-2017 IPR019489 Clp ATPase, C-terminal NA29_RS01120 2f6eddba0f6203bde5510a66fd6e6499 452 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 452 3.5E-204 T 09-03-2017 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 NA29_RS01120 2f6eddba0f6203bde5510a66fd6e6499 452 SUPERFAMILY SSF52540 4 449 7.09E-86 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01120 2f6eddba0f6203bde5510a66fd6e6499 452 Pfam PF07724 AAA domain (Cdc48 subfamily) 191 338 1.2E-39 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 NA29_RS01120 2f6eddba0f6203bde5510a66fd6e6499 452 Gene3D G3DSA:1.10.8.10 111 186 3.3E-29 T 09-03-2017 NA29_RS01120 2f6eddba0f6203bde5510a66fd6e6499 452 Gene3D G3DSA:1.10.8.10 222 252 3.3E-29 T 09-03-2017 NA29_RS01120 2f6eddba0f6203bde5510a66fd6e6499 452 Gene3D G3DSA:1.10.8.60 343 452 2.6E-31 T 09-03-2017 NA29_RS16915 871ef2ba6d76fa9fac1e01f72f3ed941 400 Gene3D G3DSA:3.90.550.10 46 262 8.3E-17 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS16915 871ef2ba6d76fa9fac1e01f72f3ed941 400 Pfam PF00535 Glycosyl transferase family 2 50 236 1.0E-19 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 NA29_RS16915 871ef2ba6d76fa9fac1e01f72f3ed941 400 TIGRFAM TIGR03469 HpnB: hopene-associated glycosyltransferase HpnB 5 392 5.6E-160 T 09-03-2017 IPR017832 Glycosyl transferase, family 2, hopene-associated, HpnB NA29_RS16915 871ef2ba6d76fa9fac1e01f72f3ed941 400 SUPERFAMILY SSF53448 48 333 3.84E-30 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS16050 1da18ee4e8ccd32779002fe4f50907b1 392 SUPERFAMILY SSF53474 69 354 6.19E-9 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS16050 1da18ee4e8ccd32779002fe4f50907b1 392 Pfam PF12697 Alpha/beta hydrolase family 102 357 2.9E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS16050 1da18ee4e8ccd32779002fe4f50907b1 392 Gene3D G3DSA:3.40.50.1820 43 366 4.5E-49 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS14625 f71294bcece13fbbfb54c78b783821e7 416 SUPERFAMILY SSF55021 341 414 3.21E-23 T 09-03-2017 NA29_RS14625 f71294bcece13fbbfb54c78b783821e7 416 PIRSF PIRSF000726 56 416 7.3E-140 T 09-03-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 NA29_RS14625 f71294bcece13fbbfb54c78b783821e7 416 Pfam PF01842 ACT domain 276 332 4.5E-9 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 NA29_RS14625 f71294bcece13fbbfb54c78b783821e7 416 Gene3D G3DSA:3.40.1160.10 1 255 2.2E-74 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase NA29_RS14625 f71294bcece13fbbfb54c78b783821e7 416 Pfam PF00696 Amino acid kinase family 3 229 5.0E-49 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase NA29_RS14625 f71294bcece13fbbfb54c78b783821e7 416 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 09-03-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 NA29_RS14625 f71294bcece13fbbfb54c78b783821e7 416 SUPERFAMILY SSF53633 4 250 1.57E-74 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase NA29_RS14625 f71294bcece13fbbfb54c78b783821e7 416 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 413 1.7E-125 T 09-03-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 NA29_RS14625 f71294bcece13fbbfb54c78b783821e7 416 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 7.1E-5 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 NA29_RS14625 f71294bcece13fbbfb54c78b783821e7 416 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 7.1E-5 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 NA29_RS14625 f71294bcece13fbbfb54c78b783821e7 416 Pfam PF13840 ACT domain 349 409 1.0E-15 T 09-03-2017 IPR027795 GATS-like ACT domain NA29_RS14625 f71294bcece13fbbfb54c78b783821e7 416 SUPERFAMILY SSF55021 257 334 1.18E-18 T 09-03-2017 NA29_RS14625 f71294bcece13fbbfb54c78b783821e7 416 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 62 412 3.9E-113 T 09-03-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 NA29_RS06880 4f1ae6b2c71deffb03da85d43f0d5ea2 213 SUPERFAMILY SSF52964 34 134 7.59E-9 T 09-03-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 NA29_RS06880 4f1ae6b2c71deffb03da85d43f0d5ea2 213 Gene3D G3DSA:3.40.50.10070 35 119 1.5E-5 T 09-03-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 NA29_RS06880 4f1ae6b2c71deffb03da85d43f0d5ea2 213 Pfam PF03783 Curli production assembly/transport component CsgG 34 210 1.2E-30 T 09-03-2017 IPR005534 Curli production assembly/transport component CsgG GO:0030288 NA29_RS03595 5b5341e7c66063fea5696dd8b438b4c9 239 SUPERFAMILY SSF51735 4 208 1.18E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS03595 5b5341e7c66063fea5696dd8b438b4c9 239 Pfam PF00106 short chain dehydrogenase 7 187 5.8E-36 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS03595 5b5341e7c66063fea5696dd8b438b4c9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 5.0E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS03595 5b5341e7c66063fea5696dd8b438b4c9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 5.0E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS03595 5b5341e7c66063fea5696dd8b438b4c9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 5.0E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS03595 5b5341e7c66063fea5696dd8b438b4c9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.0E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS03595 5b5341e7c66063fea5696dd8b438b4c9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 5.0E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS03595 5b5341e7c66063fea5696dd8b438b4c9 239 Gene3D G3DSA:3.40.50.720 5 208 9.8E-46 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS03595 5b5341e7c66063fea5696dd8b438b4c9 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 2.7E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS03595 5b5341e7c66063fea5696dd8b438b4c9 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 2.7E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS03595 5b5341e7c66063fea5696dd8b438b4c9 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 2.7E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10265 487d4793499459c0786d4b71b6eec56b 203 Gene3D G3DSA:1.10.10.60 4 59 1.6E-19 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS10265 487d4793499459c0786d4b71b6eec56b 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 2.2E-9 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS10265 487d4793499459c0786d4b71b6eec56b 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 2.2E-9 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS10265 487d4793499459c0786d4b71b6eec56b 203 SUPERFAMILY SSF48498 92 191 1.07E-16 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS10265 487d4793499459c0786d4b71b6eec56b 203 SUPERFAMILY SSF46689 3 68 8.21E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS10265 487d4793499459c0786d4b71b6eec56b 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 3.9E-15 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS10265 487d4793499459c0786d4b71b6eec56b 203 Gene3D G3DSA:1.10.357.10 60 192 8.5E-27 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS00605 bf7217735cf0c0b1de946bbb212b5c7b 321 Gene3D G3DSA:3.40.190.10 116 237 3.3E-28 T 09-03-2017 NA29_RS00605 bf7217735cf0c0b1de946bbb212b5c7b 321 SMART SM00062 33 251 8.6E-22 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS00605 bf7217735cf0c0b1de946bbb212b5c7b 321 SUPERFAMILY SSF53850 31 268 7.12E-49 T 09-03-2017 NA29_RS00605 bf7217735cf0c0b1de946bbb212b5c7b 321 Pfam PF09084 NMT1/THI5 like 80 255 5.9E-14 T 09-03-2017 IPR015168 SsuA/THI5-like NA29_RS00605 bf7217735cf0c0b1de946bbb212b5c7b 321 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 34 314 8.8E-63 T 09-03-2017 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 NA29_RS12540 bf53e5ffba3d82fed6e4d5f4859ac591 381 Gene3D G3DSA:2.40.50.100 70 99 5.2E-19 T 09-03-2017 NA29_RS12540 bf53e5ffba3d82fed6e4d5f4859ac591 381 Gene3D G3DSA:2.40.50.100 230 263 5.2E-19 T 09-03-2017 NA29_RS12540 bf53e5ffba3d82fed6e4d5f4859ac591 381 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 310 3.1E-17 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NA29_RS12540 bf53e5ffba3d82fed6e4d5f4859ac591 381 SUPERFAMILY SSF111369 69 114 1.31E-6 T 09-03-2017 NA29_RS12540 bf53e5ffba3d82fed6e4d5f4859ac591 381 SUPERFAMILY SSF111369 157 191 1.31E-6 T 09-03-2017 NA29_RS12540 bf53e5ffba3d82fed6e4d5f4859ac591 381 SUPERFAMILY SSF111369 184 285 3.14E-11 T 09-03-2017 NA29_RS25245 270102c2cd9cc2c4a45af2a96e79a8cc 153 Gene3D G3DSA:1.10.10.10 4 55 3.2E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS25245 270102c2cd9cc2c4a45af2a96e79a8cc 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 09-03-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NA29_RS25245 270102c2cd9cc2c4a45af2a96e79a8cc 153 Gene3D G3DSA:3.30.70.920 57 153 3.9E-30 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS25245 270102c2cd9cc2c4a45af2a96e79a8cc 153 SUPERFAMILY SSF46785 3 63 1.53E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS25245 270102c2cd9cc2c4a45af2a96e79a8cc 153 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 2.0E-15 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS25245 270102c2cd9cc2c4a45af2a96e79a8cc 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 2.7E-13 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS25245 270102c2cd9cc2c4a45af2a96e79a8cc 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 2.7E-13 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS25245 270102c2cd9cc2c4a45af2a96e79a8cc 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 2.7E-13 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS25245 270102c2cd9cc2c4a45af2a96e79a8cc 153 SMART SM00344 4 113 1.1E-41 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NA29_RS25245 270102c2cd9cc2c4a45af2a96e79a8cc 153 Pfam PF01037 Lrp/AsnC ligand binding domain 71 144 9.6E-26 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS25245 270102c2cd9cc2c4a45af2a96e79a8cc 153 SUPERFAMILY SSF54909 64 153 4.42E-23 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS20015 b34538cd1d45315e9ab6886cb47b25e1 316 Pfam PF03466 LysR substrate binding domain 89 295 3.1E-36 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS20015 b34538cd1d45315e9ab6886cb47b25e1 316 Gene3D G3DSA:3.40.190.10 177 263 2.7E-15 T 09-03-2017 NA29_RS20015 b34538cd1d45315e9ab6886cb47b25e1 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.8E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS20015 b34538cd1d45315e9ab6886cb47b25e1 316 SUPERFAMILY SSF53850 90 298 2.35E-37 T 09-03-2017 NA29_RS20015 b34538cd1d45315e9ab6886cb47b25e1 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.0E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS20015 b34538cd1d45315e9ab6886cb47b25e1 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.0E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS20015 b34538cd1d45315e9ab6886cb47b25e1 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.0E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS20015 b34538cd1d45315e9ab6886cb47b25e1 316 Gene3D G3DSA:1.10.10.10 4 85 6.5E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20015 b34538cd1d45315e9ab6886cb47b25e1 316 Gene3D G3DSA:3.40.190.10 92 176 2.6E-19 T 09-03-2017 NA29_RS20015 b34538cd1d45315e9ab6886cb47b25e1 316 SUPERFAMILY SSF46785 4 112 5.36E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16465 ee43bd7ff97fcd74c04678440589899f 588 Gene3D G3DSA:3.40.50.970 389 571 6.8E-48 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS16465 ee43bd7ff97fcd74c04678440589899f 588 TIGRFAM TIGR03254 oxalate_oxc: oxalyl-CoA decarboxylase 28 582 2.8E-302 T 09-03-2017 IPR017660 Oxalyl-CoA decarboxylase GO:0008949|GO:0030976|GO:0033611|GO:0046872 KEGG: 00630+4.1.1.8|MetaCyc: PWY-6695|MetaCyc: PWY-6696 NA29_RS16465 ee43bd7ff97fcd74c04678440589899f 588 SUPERFAMILY SSF52518 29 199 7.69E-45 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS16465 ee43bd7ff97fcd74c04678440589899f 588 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 420 562 2.4E-26 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NA29_RS16465 ee43bd7ff97fcd74c04678440589899f 588 Gene3D G3DSA:3.40.50.970 29 201 2.8E-49 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS16465 ee43bd7ff97fcd74c04678440589899f 588 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 222 352 5.7E-33 T 09-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 NA29_RS16465 ee43bd7ff97fcd74c04678440589899f 588 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 31 198 2.6E-46 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 NA29_RS16465 ee43bd7ff97fcd74c04678440589899f 588 SUPERFAMILY SSF52518 392 569 1.6E-40 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS16465 ee43bd7ff97fcd74c04678440589899f 588 SUPERFAMILY SSF52467 216 379 1.4E-38 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS16465 ee43bd7ff97fcd74c04678440589899f 588 Gene3D G3DSA:3.40.50.1220 217 381 3.0E-40 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS11125 42da02831a1b24f898730b9d81c49946 305 PRINTS PR01100 Shikimate kinase family signature 134 149 5.0E-13 T 09-03-2017 NA29_RS11125 42da02831a1b24f898730b9d81c49946 305 PRINTS PR01100 Shikimate kinase family signature 158 171 5.0E-13 T 09-03-2017 NA29_RS11125 42da02831a1b24f898730b9d81c49946 305 PRINTS PR01100 Shikimate kinase family signature 205 214 5.0E-13 T 09-03-2017 NA29_RS11125 42da02831a1b24f898730b9d81c49946 305 SMART SM00530 31 86 1.4E-13 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS11125 42da02831a1b24f898730b9d81c49946 305 Pfam PF13560 Helix-turn-helix domain 28 84 2.1E-14 T 09-03-2017 NA29_RS11125 42da02831a1b24f898730b9d81c49946 305 SUPERFAMILY SSF47413 27 89 3.66E-15 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS11125 42da02831a1b24f898730b9d81c49946 305 ProSitePatterns PS01128 Shikimate kinase signature. 187 213 - T 09-03-2017 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 NA29_RS11125 42da02831a1b24f898730b9d81c49946 305 Gene3D G3DSA:1.10.260.40 27 91 2.4E-16 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS11125 42da02831a1b24f898730b9d81c49946 305 Hamap MF_00109 Shikimate kinase [aroK]. 131 300 21.307 T 09-03-2017 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 NA29_RS11125 42da02831a1b24f898730b9d81c49946 305 SUPERFAMILY SSF52540 131 299 2.02E-24 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11125 42da02831a1b24f898730b9d81c49946 305 Pfam PF01202 Shikimate kinase 140 291 1.8E-30 T 09-03-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 NA29_RS11125 42da02831a1b24f898730b9d81c49946 305 Gene3D G3DSA:3.40.50.300 131 299 1.5E-38 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18645 e015af84b3f26650d6c7d95521708e48 537 Pfam PF00501 AMP-binding enzyme 27 435 1.1E-94 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS18645 e015af84b3f26650d6c7d95521708e48 537 Pfam PF13193 AMP-binding enzyme C-terminal domain 445 528 5.8E-21 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS18645 e015af84b3f26650d6c7d95521708e48 537 SUPERFAMILY SSF56801 18 536 1.57E-145 T 09-03-2017 NA29_RS18645 e015af84b3f26650d6c7d95521708e48 537 ProSitePatterns PS00455 Putative AMP-binding domain signature. 190 201 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS18645 e015af84b3f26650d6c7d95521708e48 537 Gene3D G3DSA:3.40.50.980 197 354 2.9E-43 T 09-03-2017 NA29_RS18645 e015af84b3f26650d6c7d95521708e48 537 Gene3D G3DSA:3.30.300.30 434 536 3.2E-29 T 09-03-2017 NA29_RS18645 e015af84b3f26650d6c7d95521708e48 537 Gene3D G3DSA:2.30.38.10 355 427 3.0E-26 T 09-03-2017 NA29_RS18645 e015af84b3f26650d6c7d95521708e48 537 Gene3D G3DSA:3.40.50.980 21 196 4.2E-31 T 09-03-2017 NA29_RS03065 c1309ef2b676b1f519e2eceddae3c0f5 511 Pfam PF00589 Phage integrase family 171 373 2.3E-16 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS03065 c1309ef2b676b1f519e2eceddae3c0f5 511 Gene3D G3DSA:1.10.443.10 170 375 3.3E-21 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS03065 c1309ef2b676b1f519e2eceddae3c0f5 511 SUPERFAMILY SSF56349 72 374 2.94E-23 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NA29_RS05350 16c556fe9dce33e8b1c3ce217a574e22 615 Pfam PF00578 AhpC/TSA family 316 419 1.4E-10 T 09-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 NA29_RS05350 16c556fe9dce33e8b1c3ce217a574e22 615 Gene3D G3DSA:3.40.30.10 298 442 2.2E-46 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS05350 16c556fe9dce33e8b1c3ce217a574e22 615 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 7 211 4.6E-14 T 09-03-2017 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 NA29_RS05350 16c556fe9dce33e8b1c3ce217a574e22 615 SUPERFAMILY SSF52833 295 437 1.43E-35 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS05350 16c556fe9dce33e8b1c3ce217a574e22 615 Gene3D G3DSA:2.60.120.260 466 614 3.9E-48 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS05470 3d2b250deac18d40cfaf60d8fd1254e0 348 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS05470 3d2b250deac18d40cfaf60d8fd1254e0 348 Pfam PF00005 ABC transporter 44 192 2.4E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS05470 3d2b250deac18d40cfaf60d8fd1254e0 348 SMART SM00382 53 258 1.4E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS05470 3d2b250deac18d40cfaf60d8fd1254e0 348 SUPERFAMILY SSF52540 39 264 2.26E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05470 3d2b250deac18d40cfaf60d8fd1254e0 348 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 285 2.4E-99 T 09-03-2017 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 NA29_RS05470 3d2b250deac18d40cfaf60d8fd1254e0 348 Gene3D G3DSA:3.40.50.300 32 264 3.1E-76 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19790 b388694fee33cb8fa8baa338a646b3cb 443 SMART SM00387 329 438 5.3E-24 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS19790 b388694fee33cb8fa8baa338a646b3cb 443 SMART SM00304 158 210 2.7E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS19790 b388694fee33cb8fa8baa338a646b3cb 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 2.3E-8 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS19790 b388694fee33cb8fa8baa338a646b3cb 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 2.3E-8 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS19790 b388694fee33cb8fa8baa338a646b3cb 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 2.3E-8 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS19790 b388694fee33cb8fa8baa338a646b3cb 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 436 5.0E-17 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS19790 b388694fee33cb8fa8baa338a646b3cb 443 SUPERFAMILY SSF47384 194 269 7.65E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS19790 b388694fee33cb8fa8baa338a646b3cb 443 SUPERFAMILY SSF55874 322 437 2.88E-27 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS19790 b388694fee33cb8fa8baa338a646b3cb 443 Pfam PF00672 HAMP domain 145 206 9.8E-13 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS19790 b388694fee33cb8fa8baa338a646b3cb 443 SMART SM00388 211 269 6.0E-6 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS19790 b388694fee33cb8fa8baa338a646b3cb 443 Gene3D G3DSA:1.10.287.130 201 265 6.7E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS19790 b388694fee33cb8fa8baa338a646b3cb 443 Gene3D G3DSA:3.30.565.10 324 437 2.6E-26 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS19790 b388694fee33cb8fa8baa338a646b3cb 443 SUPERFAMILY SSF158472 159 207 2.48E-6 T 09-03-2017 NA29_RS00265 4cb6ab9a27de287b7dbdd86d684b5962 367 Pfam PF04773 FecR protein 128 223 3.1E-21 T 09-03-2017 IPR006860 FecR protein NA29_RS00265 4cb6ab9a27de287b7dbdd86d684b5962 367 Pfam PF16220 Domain of unknown function (DUF4880) 27 69 8.9E-10 T 09-03-2017 IPR032623 FecR, N-terminal NA29_RS00265 4cb6ab9a27de287b7dbdd86d684b5962 367 PIRSF PIRSF018266 15 340 6.5E-85 T 09-03-2017 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NA29_RS17765 6da68d158166eec405d523e7e8a429a5 307 Gene3D G3DSA:3.40.800.20 3 305 2.4E-101 T 09-03-2017 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 NA29_RS17765 6da68d158166eec405d523e7e8a429a5 307 SUPERFAMILY SSF52768 2 306 1.2E-101 T 09-03-2017 NA29_RS17765 6da68d158166eec405d523e7e8a429a5 307 PRINTS PR01270 Histone deacetylase superfamily signature 234 244 4.4E-16 T 09-03-2017 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 NA29_RS17765 6da68d158166eec405d523e7e8a429a5 307 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 4.4E-16 T 09-03-2017 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 NA29_RS17765 6da68d158166eec405d523e7e8a429a5 307 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 4.4E-16 T 09-03-2017 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 NA29_RS17765 6da68d158166eec405d523e7e8a429a5 307 Pfam PF00850 Histone deacetylase domain 20 304 3.4E-76 T 09-03-2017 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 NA29_RS08235 6bd02ae0e2ff0f7bf1570bc55ced9c74 315 Gene3D G3DSA:3.40.190.10 201 250 1.7E-9 T 09-03-2017 NA29_RS08235 6bd02ae0e2ff0f7bf1570bc55ced9c74 315 SUPERFAMILY SSF53850 93 313 1.68E-21 T 09-03-2017 NA29_RS08235 6bd02ae0e2ff0f7bf1570bc55ced9c74 315 Gene3D G3DSA:3.40.190.10 93 200 1.5E-11 T 09-03-2017 NA29_RS08235 6bd02ae0e2ff0f7bf1570bc55ced9c74 315 Gene3D G3DSA:1.10.10.10 2 85 9.7E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08235 6bd02ae0e2ff0f7bf1570bc55ced9c74 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.7E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08235 6bd02ae0e2ff0f7bf1570bc55ced9c74 315 SUPERFAMILY SSF46785 3 85 1.15E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08235 6bd02ae0e2ff0f7bf1570bc55ced9c74 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 1.1E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08235 6bd02ae0e2ff0f7bf1570bc55ced9c74 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 1.1E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08235 6bd02ae0e2ff0f7bf1570bc55ced9c74 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 1.1E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08235 6bd02ae0e2ff0f7bf1570bc55ced9c74 315 Pfam PF03466 LysR substrate binding domain 93 249 2.1E-20 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS09455 4745841325e179d446ab890a4ee994fd 271 Pfam PF12697 Alpha/beta hydrolase family 30 253 1.9E-18 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS09455 4745841325e179d446ab890a4ee994fd 271 SUPERFAMILY SSF53474 18 266 8.84E-47 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS09455 4745841325e179d446ab890a4ee994fd 271 Gene3D G3DSA:3.40.50.1820 17 267 3.2E-48 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 SMART SM00838 605 693 1.2E-55 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 SUPERFAMILY SSF54980 409 486 1.29E-25 T 09-03-2017 IPR009022 Elongation factor G, III-V domain NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 Gene3D G3DSA:3.30.70.870 411 485 4.4E-39 T 09-03-2017 NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 Pfam PF00679 Elongation factor G C-terminus 605 691 4.4E-32 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 Pfam PF14492 Elongation Factor G, domain II 409 483 3.4E-35 T 09-03-2017 IPR009022 Elongation factor G, III-V domain NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 Gene3D G3DSA:3.40.50.300 6 293 9.8E-105 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 SMART SM00889 485 603 7.1E-71 T 09-03-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 Gene3D G3DSA:2.40.30.10 310 410 1.9E-37 T 09-03-2017 NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 SUPERFAMILY SSF50447 271 409 2.78E-35 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 SUPERFAMILY SSF52540 6 288 1.3E-107 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 Gene3D G3DSA:3.30.230.10 489 603 1.8E-47 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 698 0.0 T 09-03-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 Gene3D G3DSA:3.30.70.240 604 691 2.6E-34 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 111.339 T 09-03-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 Pfam PF03144 Elongation factor Tu domain 2 329 396 6.3E-16 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.9E-31 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 9.8E-67 T 09-03-2017 NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-15 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-15 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-15 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-15 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-15 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 SUPERFAMILY SSF54980 608 696 2.4E-29 T 09-03-2017 IPR009022 Elongation factor G, III-V domain NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 SUPERFAMILY SSF54211 484 604 2.48E-41 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS14065 ebc1385d79d1c28098d6c35462ccfee7 698 Pfam PF03764 Elongation factor G, domain IV 484 602 1.6E-46 T 09-03-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 NA29_RS25315 8c5743528702b8998b69aab8d862caed 150 Gene3D G3DSA:2.170.270.10 4 145 4.2E-44 T 09-03-2017 NA29_RS25315 8c5743528702b8998b69aab8d862caed 150 SMART SM00317 5 123 5.9E-32 T 09-03-2017 IPR001214 SET domain GO:0005515 NA29_RS25315 8c5743528702b8998b69aab8d862caed 150 Pfam PF00856 SET domain 16 117 1.8E-18 T 09-03-2017 IPR001214 SET domain GO:0005515 NA29_RS25315 8c5743528702b8998b69aab8d862caed 150 SUPERFAMILY SSF82199 5 143 2.88E-44 T 09-03-2017 NA29_RS08790 b0417cd2c4d20228dde45ddc374a280c 101 SUPERFAMILY SSF50022 3 100 2.36E-29 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS08790 b0417cd2c4d20228dde45ddc374a280c 101 Pfam PF00355 Rieske [2Fe-2S] domain 7 88 6.9E-18 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS08790 b0417cd2c4d20228dde45ddc374a280c 101 Gene3D G3DSA:2.102.10.10 5 100 2.1E-29 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS06915 95d722e799e2748f63cf8d66b510c243 103 SMART SM00530 14 69 1.4E-4 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS06915 95d722e799e2748f63cf8d66b510c243 103 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 8 83 2.8E-30 T 09-03-2017 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 NA29_RS06915 95d722e799e2748f63cf8d66b510c243 103 SUPERFAMILY SSF47413 10 89 2.34E-25 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS06915 95d722e799e2748f63cf8d66b510c243 103 Gene3D G3DSA:1.10.260.40 6 83 5.1E-31 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS06915 95d722e799e2748f63cf8d66b510c243 103 Pfam PF01381 Helix-turn-helix 21 66 1.9E-9 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS19475 f3ffdbcdefa13f88668628658fce2a12 364 Pfam PF08402 TOBE domain 278 354 2.0E-6 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 NA29_RS19475 f3ffdbcdefa13f88668628658fce2a12 364 Gene3D G3DSA:3.40.50.300 4 235 6.8E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19475 f3ffdbcdefa13f88668628658fce2a12 364 SMART SM00382 29 213 8.7E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS19475 f3ffdbcdefa13f88668628658fce2a12 364 Gene3D G3DSA:2.40.50.100 240 282 1.8E-9 T 09-03-2017 NA29_RS19475 f3ffdbcdefa13f88668628658fce2a12 364 Gene3D G3DSA:2.40.50.100 348 362 1.8E-9 T 09-03-2017 NA29_RS19475 f3ffdbcdefa13f88668628658fce2a12 364 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS19475 f3ffdbcdefa13f88668628658fce2a12 364 Pfam PF00005 ABC transporter 20 162 4.9E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS19475 f3ffdbcdefa13f88668628658fce2a12 364 SUPERFAMILY SSF52540 4 243 3.71E-84 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19475 f3ffdbcdefa13f88668628658fce2a12 364 SUPERFAMILY SSF50331 237 362 1.58E-25 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS19475 f3ffdbcdefa13f88668628658fce2a12 364 Gene3D G3DSA:2.40.50.140 283 346 1.1E-15 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS10345 22cf7148ceec4cce5ad4448d90bcaede 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 6 418 53.361 T 09-03-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 NA29_RS10345 22cf7148ceec4cce5ad4448d90bcaede 426 SMART SM01086 320 415 2.6E-31 T 09-03-2017 IPR019489 Clp ATPase, C-terminal NA29_RS10345 22cf7148ceec4cce5ad4448d90bcaede 426 SMART SM00382 116 336 1.1E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS10345 22cf7148ceec4cce5ad4448d90bcaede 426 Pfam PF06689 ClpX C4-type zinc finger 14 50 3.4E-20 T 09-03-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 NA29_RS10345 22cf7148ceec4cce5ad4448d90bcaede 426 SMART SM00994 13 52 8.7E-24 T 09-03-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 NA29_RS10345 22cf7148ceec4cce5ad4448d90bcaede 426 SUPERFAMILY SSF52540 65 402 8.42E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10345 22cf7148ceec4cce5ad4448d90bcaede 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 320 393 5.1E-15 T 09-03-2017 IPR019489 Clp ATPase, C-terminal NA29_RS10345 22cf7148ceec4cce5ad4448d90bcaede 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 117 313 3.9E-49 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 NA29_RS10345 22cf7148ceec4cce5ad4448d90bcaede 426 Gene3D G3DSA:3.40.50.300 70 258 6.8E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10345 22cf7148ceec4cce5ad4448d90bcaede 426 Gene3D G3DSA:3.40.50.300 297 314 6.8E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10345 22cf7148ceec4cce5ad4448d90bcaede 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 11 415 2.7E-203 T 09-03-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 NA29_RS10345 22cf7148ceec4cce5ad4448d90bcaede 426 Gene3D G3DSA:1.10.8.60 319 419 1.0E-33 T 09-03-2017 NA29_RS10345 22cf7148ceec4cce5ad4448d90bcaede 426 SUPERFAMILY SSF57716 14 49 1.01E-11 T 09-03-2017 NA29_RS09110 a792ed62d0c1370573db1f6512f43b10 514 Pfam PF00682 HMGL-like 5 274 1.4E-96 T 09-03-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 NA29_RS09110 a792ed62d0c1370573db1f6512f43b10 514 Gene3D G3DSA:3.20.20.70 1 348 1.0E-143 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS09110 a792ed62d0c1370573db1f6512f43b10 514 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 09-03-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 NA29_RS09110 a792ed62d0c1370573db1f6512f43b10 514 SMART SM00917 371 502 7.4E-39 T 09-03-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 NA29_RS09110 a792ed62d0c1370573db1f6512f43b10 514 SUPERFAMILY SSF110921 392 501 1.57E-26 T 09-03-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 NA29_RS09110 a792ed62d0c1370573db1f6512f43b10 514 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 09-03-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 NA29_RS09110 a792ed62d0c1370573db1f6512f43b10 514 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 511 42.246 T 09-03-2017 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 NA29_RS09110 a792ed62d0c1370573db1f6512f43b10 514 SUPERFAMILY SSF51569 2 292 4.21E-96 T 09-03-2017 NA29_RS09110 a792ed62d0c1370573db1f6512f43b10 514 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 499 6.4E-210 T 09-03-2017 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 NA29_RS09110 a792ed62d0c1370573db1f6512f43b10 514 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 501 2.9E-34 T 09-03-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 NA29_RS11605 f879632cc3c83e032e614c0c264c617b 130 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 60 107 4.6E-18 T 09-03-2017 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS11605 f879632cc3c83e032e614c0c264c617b 130 Gene3D G3DSA:1.20.1290.10 10 126 3.4E-35 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS11605 f879632cc3c83e032e614c0c264c617b 130 Pfam PF02627 Carboxymuconolactone decarboxylase family 45 117 1.6E-18 T 09-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS11605 f879632cc3c83e032e614c0c264c617b 130 SUPERFAMILY SSF69118 1 129 1.83E-34 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS10000 f3b517f7bc36ec8d605d989319fee727 329 SUPERFAMILY SSF46689 278 326 1.48E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS10000 f3b517f7bc36ec8d605d989319fee727 329 SMART SM00342 242 325 5.3E-17 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS10000 f3b517f7bc36ec8d605d989319fee727 329 Gene3D G3DSA:1.10.10.60 230 278 1.2E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS10000 f3b517f7bc36ec8d605d989319fee727 329 Pfam PF01965 DJ-1/PfpI family 7 186 1.3E-12 T 09-03-2017 IPR002818 DJ-1/PfpI NA29_RS10000 f3b517f7bc36ec8d605d989319fee727 329 SUPERFAMILY SSF46689 225 276 8.69E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS10000 f3b517f7bc36ec8d605d989319fee727 329 Pfam PF12833 Helix-turn-helix domain 249 326 9.8E-17 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS10000 f3b517f7bc36ec8d605d989319fee727 329 Gene3D G3DSA:3.40.50.880 7 229 1.8E-39 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS10000 f3b517f7bc36ec8d605d989319fee727 329 Gene3D G3DSA:1.10.10.60 279 326 9.4E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS10000 f3b517f7bc36ec8d605d989319fee727 329 SUPERFAMILY SSF52317 7 207 5.64E-31 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 SMART SM00342 100 183 3.7E-26 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 SUPERFAMILY SSF46689 87 133 8.69E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 Gene3D G3DSA:1.10.1670.10 437 481 2.1E-15 T 09-03-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 Pfam PF02805 Metal binding domain of Ada 8 71 2.9E-28 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 137 179 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 Gene3D G3DSA:1.10.10.60 138 188 7.0E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 SUPERFAMILY SSF57884 3 76 1.29E-30 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 SMART SM00478 326 482 2.1E-16 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 Pfam PF12833 Helix-turn-helix domain 106 183 1.5E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 SUPERFAMILY SSF55945 201 301 5.81E-23 T 09-03-2017 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 420 444 - T 09-03-2017 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 Gene3D G3DSA:3.40.10.10 2 76 9.2E-32 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 322 451 1.6E-10 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 SUPERFAMILY SSF46689 137 187 6.72E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 Gene3D G3DSA:1.10.340.30 317 435 1.3E-36 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 Gene3D G3DSA:1.10.10.60 85 137 2.9E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 Gene3D G3DSA:3.30.310.20 201 316 6.9E-32 T 09-03-2017 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 SMART SM01009 200 316 1.5E-37 T 09-03-2017 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 SUPERFAMILY SSF48150 307 479 4.89E-47 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 NA29_RS14875 10398a2749665341b92caf3a87b01d24 498 Pfam PF06029 AlkA N-terminal domain 201 316 5.7E-29 T 09-03-2017 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal NA29_RS22520 08093db832827ec910151792592b5054 691 SUPERFAMILY SSF50692 536 689 9.95E-37 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain NA29_RS22520 08093db832827ec910151792592b5054 691 Gene3D G3DSA:2.40.40.20 548 691 7.7E-42 T 09-03-2017 NA29_RS22520 08093db832827ec910151792592b5054 691 Pfam PF00384 Molybdopterin oxidoreductase 63 476 5.7E-58 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS22520 08093db832827ec910151792592b5054 691 Gene3D G3DSA:3.40.50.740 320 540 1.2E-53 T 09-03-2017 NA29_RS22520 08093db832827ec910151792592b5054 691 Gene3D G3DSA:3.40.50.740 65 139 1.2E-53 T 09-03-2017 NA29_RS22520 08093db832827ec910151792592b5054 691 Gene3D G3DSA:2.20.25.90 3 64 3.3E-17 T 09-03-2017 NA29_RS22520 08093db832827ec910151792592b5054 691 SMART SM00926 5 60 8.7E-16 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS22520 08093db832827ec910151792592b5054 691 Gene3D G3DSA:3.40.228.10 141 319 1.8E-63 T 09-03-2017 NA29_RS22520 08093db832827ec910151792592b5054 691 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 6 60 1.3E-10 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS22520 08093db832827ec910151792592b5054 691 Pfam PF01568 Molydopterin dinucleotide binding domain 575 684 6.0E-23 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 NA29_RS22520 08093db832827ec910151792592b5054 691 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 612 639 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 NA29_RS22520 08093db832827ec910151792592b5054 691 SUPERFAMILY SSF53706 7 563 5.37E-171 T 09-03-2017 NA29_RS22070 aed082f6175ef6dbe1833d3262fb6135 180 Pfam PF04390 Lipopolysaccharide-assembly 21 167 3.8E-17 T 09-03-2017 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 NA29_RS22070 aed082f6175ef6dbe1833d3262fb6135 180 Gene3D G3DSA:3.30.160.150 30 176 1.4E-39 T 09-03-2017 NA29_RS22070 aed082f6175ef6dbe1833d3262fb6135 180 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 15 172 22.298 T 09-03-2017 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 NA29_RS08225 8eb7f14ed9e23bce430dc8b134940498 234 Gene3D G3DSA:3.90.850.10 22 230 3.7E-79 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS08225 8eb7f14ed9e23bce430dc8b134940498 234 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 228 3.1E-53 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS08225 8eb7f14ed9e23bce430dc8b134940498 234 SUPERFAMILY SSF56529 21 229 1.14E-69 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS20130 9aeb746ad5afb838d69087e71d8ae92e 90 SUPERFAMILY SSF46992 3 86 8.24E-25 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS20130 9aeb746ad5afb838d69087e71d8ae92e 90 Gene3D G3DSA:1.20.58.110 1 86 1.3E-25 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS20130 9aeb746ad5afb838d69087e71d8ae92e 90 Pfam PF01649 Ribosomal protein S20 2 84 4.0E-23 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS20130 9aeb746ad5afb838d69087e71d8ae92e 90 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.168 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS20130 9aeb746ad5afb838d69087e71d8ae92e 90 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 9.5E-23 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS20130 9aeb746ad5afb838d69087e71d8ae92e 90 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 80 4.0E-10 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS01700 9221d9cd4548afab8b4d8df3904f5efc 228 Pfam PF14497 Glutathione S-transferase, C-terminal domain 150 212 5.2E-6 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal NA29_RS01700 9221d9cd4548afab8b4d8df3904f5efc 228 Gene3D G3DSA:1.20.1050.10 108 218 4.7E-24 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS01700 9221d9cd4548afab8b4d8df3904f5efc 228 Pfam PF13417 Glutathione S-transferase, N-terminal domain 22 96 4.1E-15 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS01700 9221d9cd4548afab8b4d8df3904f5efc 228 SUPERFAMILY SSF47616 98 214 1.11E-20 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS01700 9221d9cd4548afab8b4d8df3904f5efc 228 SUPERFAMILY SSF52833 11 102 2.44E-26 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS01700 9221d9cd4548afab8b4d8df3904f5efc 228 Gene3D G3DSA:3.40.30.10 15 107 2.4E-29 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS24455 3828abb86dc78411a8bfbebd81751b28 569 SUPERFAMILY SSF55816 377 553 1.16E-30 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 NA29_RS24455 3828abb86dc78411a8bfbebd81751b28 569 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 2 561 3.0E-270 T 09-03-2017 IPR030998 Thiosulfohydrolase SoxB NA29_RS24455 3828abb86dc78411a8bfbebd81751b28 569 Pfam PF02872 5'-nucleotidase, C-terminal domain 396 532 1.1E-15 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 NA29_RS24455 3828abb86dc78411a8bfbebd81751b28 569 Gene3D G3DSA:3.60.21.10 114 378 1.6E-81 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS24455 3828abb86dc78411a8bfbebd81751b28 569 Gene3D G3DSA:3.60.21.10 40 60 1.6E-81 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS24455 3828abb86dc78411a8bfbebd81751b28 569 Gene3D G3DSA:3.90.780.10 396 533 6.6E-17 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 NA29_RS24455 3828abb86dc78411a8bfbebd81751b28 569 PRINTS PR01607 Apyrase family signature 41 59 5.8E-11 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 NA29_RS24455 3828abb86dc78411a8bfbebd81751b28 569 PRINTS PR01607 Apyrase family signature 266 283 5.8E-11 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 NA29_RS24455 3828abb86dc78411a8bfbebd81751b28 569 PRINTS PR01607 Apyrase family signature 317 337 5.8E-11 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 NA29_RS24455 3828abb86dc78411a8bfbebd81751b28 569 PRINTS PR01607 Apyrase family signature 285 308 5.8E-11 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 NA29_RS24455 3828abb86dc78411a8bfbebd81751b28 569 PRINTS PR01607 Apyrase family signature 511 530 5.8E-11 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 NA29_RS24455 3828abb86dc78411a8bfbebd81751b28 569 SUPERFAMILY SSF56300 114 377 3.99E-78 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS24455 3828abb86dc78411a8bfbebd81751b28 569 SUPERFAMILY SSF56300 38 60 3.99E-78 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS11775 3223d776c537672090bec43c47d9e405 462 Gene3D G3DSA:1.10.8.60 400 453 1.5E-4 T 09-03-2017 NA29_RS11775 3223d776c537672090bec43c47d9e405 462 SUPERFAMILY SSF52540 212 452 7.91E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11775 3223d776c537672090bec43c47d9e405 462 SMART SM00382 253 385 8.6E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS11775 3223d776c537672090bec43c47d9e405 462 Gene3D G3DSA:3.40.50.300 212 399 1.7E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11775 3223d776c537672090bec43c47d9e405 462 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 258 382 1.9E-30 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 NA29_RS12120 f85fd5e66874ebe2ce6cbb58ae035834 209 Gene3D G3DSA:3.40.50.2020 3 202 4.1E-34 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS12120 f85fd5e66874ebe2ce6cbb58ae035834 209 Pfam PF00156 Phosphoribosyl transferase domain 6 194 7.1E-34 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 NA29_RS12120 f85fd5e66874ebe2ce6cbb58ae035834 209 SUPERFAMILY SSF53271 3 206 3.54E-42 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS04295 6cb6c6f6315db0c46b7080a01bf902db 531 Gene3D G3DSA:1.20.1250.20 273 434 2.3E-20 T 09-03-2017 NA29_RS04295 6cb6c6f6315db0c46b7080a01bf902db 531 Gene3D G3DSA:1.20.1250.20 24 205 2.7E-30 T 09-03-2017 NA29_RS04295 6cb6c6f6315db0c46b7080a01bf902db 531 Pfam PF07690 Major Facilitator Superfamily 27 420 1.6E-56 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS04295 6cb6c6f6315db0c46b7080a01bf902db 531 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 22 492 1.9E-72 T 09-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 NA29_RS04295 6cb6c6f6315db0c46b7080a01bf902db 531 SUPERFAMILY SSF103473 24 212 9.42E-72 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS04295 6cb6c6f6315db0c46b7080a01bf902db 531 SUPERFAMILY SSF103473 259 430 9.42E-72 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS21780 e78bbaf01b07b57d335f6f7d391b7191 438 Gene3D G3DSA:3.40.50.300 5 232 2.4E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS21780 e78bbaf01b07b57d335f6f7d391b7191 438 Pfam PF00005 ABC transporter 33 172 3.5E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS21780 e78bbaf01b07b57d335f6f7d391b7191 438 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS21780 e78bbaf01b07b57d335f6f7d391b7191 438 SMART SM00382 42 224 5.3E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS21780 e78bbaf01b07b57d335f6f7d391b7191 438 Pfam PF09821 C-terminal AAA-associated domain 305 423 2.9E-43 T 09-03-2017 IPR018632 C-terminal AAA-associated domain NA29_RS21780 e78bbaf01b07b57d335f6f7d391b7191 438 SUPERFAMILY SSF52540 17 252 1.11E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24495 a3062921ec1b2b20ac0897d3dc4c8d6e 458 TIGRFAM TIGR04555 sulfite_DH_soxC: sulfite dehydrogenase 39 455 4.1E-191 T 09-03-2017 IPR030835 Sulfite dehydrogenase SoxC NA29_RS24495 a3062921ec1b2b20ac0897d3dc4c8d6e 458 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 332 443 9.6E-17 T 09-03-2017 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 NA29_RS24495 a3062921ec1b2b20ac0897d3dc4c8d6e 458 Pfam PF00174 Oxidoreductase molybdopterin binding domain 146 305 8.9E-45 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 NA29_RS24495 a3062921ec1b2b20ac0897d3dc4c8d6e 458 SUPERFAMILY SSF81296 332 446 6.93E-32 T 09-03-2017 IPR014756 Immunoglobulin E-set NA29_RS24495 a3062921ec1b2b20ac0897d3dc4c8d6e 458 Gene3D G3DSA:2.60.40.650 334 447 1.5E-27 T 09-03-2017 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 NA29_RS24495 a3062921ec1b2b20ac0897d3dc4c8d6e 458 Gene3D G3DSA:3.90.420.10 100 333 2.6E-63 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 NA29_RS24495 a3062921ec1b2b20ac0897d3dc4c8d6e 458 SUPERFAMILY SSF56524 94 335 6.93E-69 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 NA29_RS24495 a3062921ec1b2b20ac0897d3dc4c8d6e 458 PRINTS PR00407 Eukaryotic molybdopterin domain signature 273 286 1.8E-16 T 09-03-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 NA29_RS24495 a3062921ec1b2b20ac0897d3dc4c8d6e 458 PRINTS PR00407 Eukaryotic molybdopterin domain signature 289 302 1.8E-16 T 09-03-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 NA29_RS24495 a3062921ec1b2b20ac0897d3dc4c8d6e 458 PRINTS PR00407 Eukaryotic molybdopterin domain signature 132 148 1.8E-16 T 09-03-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 NA29_RS24495 a3062921ec1b2b20ac0897d3dc4c8d6e 458 PRINTS PR00407 Eukaryotic molybdopterin domain signature 256 272 1.8E-16 T 09-03-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 NA29_RS24495 a3062921ec1b2b20ac0897d3dc4c8d6e 458 PRINTS PR00407 Eukaryotic molybdopterin domain signature 367 379 1.8E-16 T 09-03-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 NA29_RS00760 e4b9759e4ff6d9cc1ca50fb8ddd016bf 211 SUPERFAMILY SSF102114 46 137 3.14E-7 T 09-03-2017 NA29_RS00760 e4b9759e4ff6d9cc1ca50fb8ddd016bf 211 Gene3D G3DSA:3.20.20.70 46 136 9.0E-8 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS00760 e4b9759e4ff6d9cc1ca50fb8ddd016bf 211 PIRSF PIRSF000370 1 211 3.5E-37 T 09-03-2017 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 NA29_RS00760 e4b9759e4ff6d9cc1ca50fb8ddd016bf 211 Pfam PF13394 4Fe-4S single cluster domain 25 124 1.7E-6 T 09-03-2017 NA29_RS00760 e4b9759e4ff6d9cc1ca50fb8ddd016bf 211 Pfam PF04055 Radical SAM superfamily 46 122 8.5E-9 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 NA29_RS00760 e4b9759e4ff6d9cc1ca50fb8ddd016bf 211 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 211 34.404 T 09-03-2017 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 NA29_RS00760 e4b9759e4ff6d9cc1ca50fb8ddd016bf 211 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 3 211 1.7E-109 T 09-03-2017 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 NA29_RS03345 d7b1ce5a6d9ac9ee8016974727ea6d2b 356 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS03345 d7b1ce5a6d9ac9ee8016974727ea6d2b 356 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 5.9E-8 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS03345 d7b1ce5a6d9ac9ee8016974727ea6d2b 356 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 5.9E-8 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS03345 d7b1ce5a6d9ac9ee8016974727ea6d2b 356 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 5.9E-8 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS03345 d7b1ce5a6d9ac9ee8016974727ea6d2b 356 Gene3D G3DSA:1.10.1660.10 58 125 1.3E-10 T 09-03-2017 NA29_RS03345 d7b1ce5a6d9ac9ee8016974727ea6d2b 356 Gene3D G3DSA:1.10.1660.10 2 57 2.2E-23 T 09-03-2017 NA29_RS03345 d7b1ce5a6d9ac9ee8016974727ea6d2b 356 SUPERFAMILY SSF46955 3 122 3.08E-26 T 09-03-2017 IPR009061 Putative DNA-binding domain NA29_RS03345 d7b1ce5a6d9ac9ee8016974727ea6d2b 356 Pfam PF07739 TipAS antibiotic-recognition domain 158 240 2.9E-6 T 09-03-2017 IPR012925 TipAS antibiotic-recognition domain NA29_RS03345 d7b1ce5a6d9ac9ee8016974727ea6d2b 356 SMART SM00422 3 72 4.5E-28 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS03345 d7b1ce5a6d9ac9ee8016974727ea6d2b 356 Pfam PF13411 MerR HTH family regulatory protein 4 71 4.7E-16 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 Gene3D G3DSA:1.10.3850.10 285 500 1.2E-63 T 09-03-2017 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 Gene3D G3DSA:1.10.3850.10 824 1037 3.3E-56 T 09-03-2017 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1051 0.0 T 09-03-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 Pfam PF00873 AcrB/AcrD/AcrF family 3 1036 0.0 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 SUPERFAMILY SSF82693 277 333 6.8E-28 T 09-03-2017 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 SUPERFAMILY SSF82693 139 184 6.8E-28 T 09-03-2017 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 Gene3D G3DSA:3.30.2090.10 732 818 7.3E-23 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 Gene3D G3DSA:3.30.2090.10 184 278 3.0E-25 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 Gene3D G3DSA:3.30.70.1430 41 141 3.1E-32 T 09-03-2017 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 SUPERFAMILY SSF82866 299 499 3.4E-53 T 09-03-2017 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 SUPERFAMILY SSF82693 575 681 8.89E-26 T 09-03-2017 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 SUPERFAMILY SSF82693 41 134 2.2E-26 T 09-03-2017 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 SUPERFAMILY SSF82714 732 818 6.93E-21 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 SUPERFAMILY SSF82693 818 867 3.4E-28 T 09-03-2017 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 SUPERFAMILY SSF82693 682 731 3.4E-28 T 09-03-2017 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 9.5E-93 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 9.5E-93 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 9.5E-93 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 9.5E-93 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 9.5E-93 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 9.5E-93 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 9.5E-93 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 9.5E-93 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 9.5E-93 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 SUPERFAMILY SSF82866 841 1036 1.57E-43 T 09-03-2017 NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 SUPERFAMILY SSF82714 185 274 1.31E-19 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS10205 d10a332c322bf375d615d2bc81534f07 1061 Gene3D G3DSA:3.30.70.1430 579 680 1.5E-28 T 09-03-2017 NA29_RS18000 08a7cb41a6a2732eb8ab24d079a3cc27 433 Gene3D G3DSA:3.40.50.300 12 227 3.1E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18000 08a7cb41a6a2732eb8ab24d079a3cc27 433 Gene3D G3DSA:2.40.30.10 232 345 2.7E-20 T 09-03-2017 NA29_RS18000 08a7cb41a6a2732eb8ab24d079a3cc27 433 SUPERFAMILY SSF52540 13 240 1.1E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18000 08a7cb41a6a2732eb8ab24d079a3cc27 433 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 67 82 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site NA29_RS18000 08a7cb41a6a2732eb8ab24d079a3cc27 433 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 13 428 6.7E-159 T 09-03-2017 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 NA29_RS18000 08a7cb41a6a2732eb8ab24d079a3cc27 433 SUPERFAMILY SSF50465 326 429 1.39E-29 T 09-03-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NA29_RS18000 08a7cb41a6a2732eb8ab24d079a3cc27 433 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.0E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS18000 08a7cb41a6a2732eb8ab24d079a3cc27 433 PRINTS PR00315 GTP-binding elongation factor signature 110 121 4.0E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS18000 08a7cb41a6a2732eb8ab24d079a3cc27 433 PRINTS PR00315 GTP-binding elongation factor signature 74 82 4.0E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS18000 08a7cb41a6a2732eb8ab24d079a3cc27 433 PRINTS PR00315 GTP-binding elongation factor signature 155 164 4.0E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS18000 08a7cb41a6a2732eb8ab24d079a3cc27 433 PRINTS PR00315 GTP-binding elongation factor signature 94 104 4.0E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS18000 08a7cb41a6a2732eb8ab24d079a3cc27 433 Gene3D G3DSA:2.40.30.10 346 431 6.7E-7 T 09-03-2017 NA29_RS18000 08a7cb41a6a2732eb8ab24d079a3cc27 433 Pfam PF00009 Elongation factor Tu GTP binding domain 13 219 2.5E-36 T 09-03-2017 NA29_RS18000 08a7cb41a6a2732eb8ab24d079a3cc27 433 SUPERFAMILY SSF50447 231 322 7.28E-19 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain NA29_RS04570 65cbbe6516d67750a35c3a3d1ce1984a 159 SUPERFAMILY SSF69500 1 153 3.53E-50 T 09-03-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain NA29_RS04570 65cbbe6516d67750a35c3a3d1ce1984a 159 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 152 1.4E-47 T 09-03-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 NA29_RS04570 65cbbe6516d67750a35c3a3d1ce1984a 159 Gene3D G3DSA:3.50.80.10 1 153 6.5E-52 T 09-03-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain NA29_RS04570 65cbbe6516d67750a35c3a3d1ce1984a 159 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 154 33.258 T 09-03-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 NA29_RS04570 65cbbe6516d67750a35c3a3d1ce1984a 159 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 154 4.6E-49 T 09-03-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 NA29_RS05615 ae10d618e07c3309e36dacced94fe465 529 Gene3D G3DSA:3.40.710.10 292 527 4.4E-67 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS05615 ae10d618e07c3309e36dacced94fe465 529 SUPERFAMILY SSF56601 68 527 1.56E-86 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS05615 ae10d618e07c3309e36dacced94fe465 529 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 109 522 1.4E-79 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NA29_RS05615 ae10d618e07c3309e36dacced94fe465 529 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 113 507 5.7E-62 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NA29_RS05615 ae10d618e07c3309e36dacced94fe465 529 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 407 421 8.5E-22 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NA29_RS05615 ae10d618e07c3309e36dacced94fe465 529 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 484 497 8.5E-22 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NA29_RS05615 ae10d618e07c3309e36dacced94fe465 529 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 348 370 8.5E-22 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NA29_RS05615 ae10d618e07c3309e36dacced94fe465 529 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 118 137 8.5E-22 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NA29_RS05615 ae10d618e07c3309e36dacced94fe465 529 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 422 436 8.5E-22 T 09-03-2017 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NA29_RS23120 7096baa4588149dae9eb4e40bb775435 306 Gene3D G3DSA:3.10.50.40 163 284 2.8E-23 T 09-03-2017 NA29_RS23120 7096baa4588149dae9eb4e40bb775435 306 Pfam PF13145 PPIC-type PPIASE domain 145 273 6.5E-17 T 09-03-2017 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 NA29_RS23120 7096baa4588149dae9eb4e40bb775435 306 SUPERFAMILY SSF109998 60 193 9.42E-14 T 09-03-2017 IPR027304 Trigger factor/SurA domain NA29_RS23120 7096baa4588149dae9eb4e40bb775435 306 SUPERFAMILY SSF54534 164 264 9.81E-19 T 09-03-2017 NA29_RS23785 7f4bd8b3ab4cf24b0c2fc2ce98cb7cc0 172 SUPERFAMILY SSF54211 85 165 1.16E-25 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS23785 7f4bd8b3ab4cf24b0c2fc2ce98cb7cc0 172 Gene3D G3DSA:3.30.230.10 82 165 3.7E-32 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NA29_RS23785 7f4bd8b3ab4cf24b0c2fc2ce98cb7cc0 172 Gene3D G3DSA:3.30.160.20 15 79 1.5E-26 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain NA29_RS23785 7f4bd8b3ab4cf24b0c2fc2ce98cb7cc0 172 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 80 2.1E-25 T 09-03-2017 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 NA29_RS23785 7f4bd8b3ab4cf24b0c2fc2ce98cb7cc0 172 ProSitePatterns PS00585 Ribosomal protein S5 signature. 34 66 - T 09-03-2017 IPR018192 Ribosomal protein S5, N-terminal, conserved site NA29_RS23785 7f4bd8b3ab4cf24b0c2fc2ce98cb7cc0 172 Pfam PF03719 Ribosomal protein S5, C-terminal domain 93 163 1.8E-29 T 09-03-2017 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 NA29_RS23785 7f4bd8b3ab4cf24b0c2fc2ce98cb7cc0 172 SUPERFAMILY SSF54768 13 81 7.95E-22 T 09-03-2017 NA29_RS23785 7f4bd8b3ab4cf24b0c2fc2ce98cb7cc0 172 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 169 4.9E-65 T 09-03-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 NA29_RS23785 7f4bd8b3ab4cf24b0c2fc2ce98cb7cc0 172 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 169 34.102 T 09-03-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 NA29_RS04110 61d8cd919813e7d216ed18ae5faa524a 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.6E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04110 61d8cd919813e7d216ed18ae5faa524a 308 Gene3D G3DSA:1.10.10.10 2 84 5.8E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04110 61d8cd919813e7d216ed18ae5faa524a 308 Gene3D G3DSA:3.40.190.10 93 179 3.2E-24 T 09-03-2017 NA29_RS04110 61d8cd919813e7d216ed18ae5faa524a 308 SUPERFAMILY SSF46785 3 112 3.32E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04110 61d8cd919813e7d216ed18ae5faa524a 308 SUPERFAMILY SSF53850 90 296 2.71E-39 T 09-03-2017 NA29_RS04110 61d8cd919813e7d216ed18ae5faa524a 308 Gene3D G3DSA:3.40.190.10 180 260 4.6E-4 T 09-03-2017 NA29_RS04110 61d8cd919813e7d216ed18ae5faa524a 308 Pfam PF03466 LysR substrate binding domain 89 293 2.5E-38 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS03335 72ca99918d51c3a943af50b3c6213711 193 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 190 5.2E-53 T 09-03-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 NA29_RS03335 72ca99918d51c3a943af50b3c6213711 193 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 191 30.765 T 09-03-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 NA29_RS03335 72ca99918d51c3a943af50b3c6213711 193 Gene3D G3DSA:2.40.50.140 1 65 1.7E-27 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS03335 72ca99918d51c3a943af50b3c6213711 193 SUPERFAMILY SSF46929 147 192 3.53E-10 T 09-03-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 NA29_RS03335 72ca99918d51c3a943af50b3c6213711 193 SMART SM00278 108 127 0.0012 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NA29_RS03335 72ca99918d51c3a943af50b3c6213711 193 SMART SM00278 73 92 0.36 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NA29_RS03335 72ca99918d51c3a943af50b3c6213711 193 Pfam PF07499 RuvA, C-terminal domain 148 191 4.0E-14 T 09-03-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 NA29_RS03335 72ca99918d51c3a943af50b3c6213711 193 Gene3D G3DSA:1.10.150.20 67 134 1.7E-28 T 09-03-2017 NA29_RS03335 72ca99918d51c3a943af50b3c6213711 193 Pfam PF14520 Helix-hairpin-helix domain 72 129 2.3E-19 T 09-03-2017 NA29_RS03335 72ca99918d51c3a943af50b3c6213711 193 SUPERFAMILY SSF47781 67 134 1.49E-20 T 09-03-2017 IPR010994 RuvA domain 2-like NA29_RS03335 72ca99918d51c3a943af50b3c6213711 193 SUPERFAMILY SSF50249 1 63 1.48E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS03335 72ca99918d51c3a943af50b3c6213711 193 Gene3D G3DSA:1.10.8.10 147 190 2.0E-10 T 09-03-2017 NA29_RS03335 72ca99918d51c3a943af50b3c6213711 193 Pfam PF01330 RuvA N terminal domain 1 62 1.8E-21 T 09-03-2017 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 NA29_RS05815 cb88af3d6c523c4ea0c58422eeeb18dc 245 Gene3D G3DSA:3.40.190.10 103 204 2.6E-29 T 09-03-2017 NA29_RS05815 cb88af3d6c523c4ea0c58422eeeb18dc 245 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 NA29_RS05815 cb88af3d6c523c4ea0c58422eeeb18dc 245 SMART SM00062 26 244 1.5E-72 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS05815 cb88af3d6c523c4ea0c58422eeeb18dc 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 242 4.9E-66 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS05815 cb88af3d6c523c4ea0c58422eeeb18dc 245 SUPERFAMILY SSF53850 1 243 6.37E-71 T 09-03-2017 NA29_RS05815 cb88af3d6c523c4ea0c58422eeeb18dc 245 Gene3D G3DSA:3.40.190.10 24 102 2.0E-42 T 09-03-2017 NA29_RS05815 cb88af3d6c523c4ea0c58422eeeb18dc 245 Gene3D G3DSA:3.40.190.10 205 243 2.0E-42 T 09-03-2017 NA29_RS05815 cb88af3d6c523c4ea0c58422eeeb18dc 245 SMART SM00079 26 243 0.0021 T 09-03-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 NA29_RS20275 0d6c96301147c0bc9d57286d3c7927c9 348 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 10 346 46.43 T 09-03-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 NA29_RS20275 0d6c96301147c0bc9d57286d3c7927c9 348 Gene3D G3DSA:3.90.650.10 175 345 1.2E-66 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain NA29_RS20275 0d6c96301147c0bc9d57286d3c7927c9 348 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 10 337 4.8E-138 T 09-03-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 NA29_RS20275 0d6c96301147c0bc9d57286d3c7927c9 348 Pfam PF00586 AIR synthase related protein, N-terminal domain 78 167 1.8E-15 T 09-03-2017 IPR016188 PurM-like, N-terminal domain NA29_RS20275 0d6c96301147c0bc9d57286d3c7927c9 348 Pfam PF02769 AIR synthase related protein, C-terminal domain 180 343 6.6E-36 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain NA29_RS20275 0d6c96301147c0bc9d57286d3c7927c9 348 SUPERFAMILY SSF55326 10 173 5.53E-53 T 09-03-2017 NA29_RS20275 0d6c96301147c0bc9d57286d3c7927c9 348 SUPERFAMILY SSF56042 174 344 5.83E-60 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain NA29_RS20275 0d6c96301147c0bc9d57286d3c7927c9 348 Gene3D G3DSA:3.30.1330.10 25 173 1.9E-62 T 09-03-2017 IPR016188 PurM-like, N-terminal domain NA29_RS05645 75461d9a90072d1e32b0b6e40f722744 344 Pfam PF02625 XdhC and CoxI family 15 83 7.4E-20 T 09-03-2017 IPR003777 XdhC- CoxI NA29_RS05645 75461d9a90072d1e32b0b6e40f722744 344 Pfam PF13478 XdhC Rossmann domain 165 306 1.9E-37 T 09-03-2017 IPR027051 XdhC Rossmann domain NA29_RS05645 75461d9a90072d1e32b0b6e40f722744 344 SUPERFAMILY SSF51735 146 249 6.8E-5 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS05645 75461d9a90072d1e32b0b6e40f722744 344 Gene3D G3DSA:3.40.50.20 162 203 5.4E-5 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS02315 33aca111b2d9e9cf83ccccdccc8c2cd5 259 SUPERFAMILY SSF46785 5 76 6.73E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS02315 33aca111b2d9e9cf83ccccdccc8c2cd5 259 SUPERFAMILY SSF55781 70 249 2.94E-48 T 09-03-2017 IPR029016 GAF domain-like NA29_RS02315 33aca111b2d9e9cf83ccccdccc8c2cd5 259 Pfam PF09339 IclR helix-turn-helix domain 7 56 2.0E-13 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS02315 33aca111b2d9e9cf83ccccdccc8c2cd5 259 SMART SM00346 5 94 1.1E-18 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS02315 33aca111b2d9e9cf83ccccdccc8c2cd5 259 Gene3D G3DSA:1.10.10.10 2 73 1.1E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS02315 33aca111b2d9e9cf83ccccdccc8c2cd5 259 Gene3D G3DSA:3.30.450.40 77 252 2.8E-50 T 09-03-2017 IPR029016 GAF domain-like NA29_RS02315 33aca111b2d9e9cf83ccccdccc8c2cd5 259 Pfam PF01614 Bacterial transcriptional regulator 123 245 3.4E-27 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS24945 f80393aed6a67fe3963484312eb53b03 186 SUPERFAMILY SSF102114 23 108 2.39E-11 T 09-03-2017 NA29_RS24945 f80393aed6a67fe3963484312eb53b03 186 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 42 126 2.2E-17 T 09-03-2017 IPR023885 4Fe4S-binding SPASM domain NA29_RS24945 f80393aed6a67fe3963484312eb53b03 186 Gene3D G3DSA:3.20.20.70 39 117 8.6E-15 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS24945 f80393aed6a67fe3963484312eb53b03 186 Pfam PF13186 Iron-sulfur cluster-binding domain 42 99 1.9E-9 T 09-03-2017 IPR023885 4Fe4S-binding SPASM domain NA29_RS16875 6bb149d674b0b6e3942913df420bd00a 395 Gene3D G3DSA:3.40.50.970 204 380 4.5E-19 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS16875 6bb149d674b0b6e3942913df420bd00a 395 SUPERFAMILY SSF52518 205 379 4.11E-24 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS16875 6bb149d674b0b6e3942913df420bd00a 395 TIGRFAM TIGR03297 Ppyr-DeCO2ase: phosphonopyruvate decarboxylase 15 387 1.0E-131 T 09-03-2017 IPR017684 Phosphonopyruvate decarboxylase GO:0032923|GO:0033980 KEGG: 00440+4.1.1.82|MetaCyc: PWY-5757|MetaCyc: PWY-6322|MetaCyc: PWY-6682|MetaCyc: PWY-6839|MetaCyc: PWY-7510 NA29_RS16875 6bb149d674b0b6e3942913df420bd00a 395 SUPERFAMILY SSF52518 5 163 1.37E-17 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS16875 6bb149d674b0b6e3942913df420bd00a 395 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 255 274 - T 09-03-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 NA29_RS16875 6bb149d674b0b6e3942913df420bd00a 395 Gene3D G3DSA:3.40.50.970 7 161 4.0E-10 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS16875 6bb149d674b0b6e3942913df420bd00a 395 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 162 3.2E-12 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 NA29_RS16875 6bb149d674b0b6e3942913df420bd00a 395 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 242 319 7.9E-12 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NA29_RS20210 72bf83ca1be19b430b20e861027fed57 398 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 29 393 5.4E-130 T 09-03-2017 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 NA29_RS20210 72bf83ca1be19b430b20e861027fed57 398 Pfam PF13484 4Fe-4S double cluster binding domain 230 294 4.2E-20 T 09-03-2017 NA29_RS20210 72bf83ca1be19b430b20e861027fed57 398 Gene3D G3DSA:3.30.70.20 206 238 7.1E-6 T 09-03-2017 NA29_RS20210 72bf83ca1be19b430b20e861027fed57 398 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 231 242 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS20210 72bf83ca1be19b430b20e861027fed57 398 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 22 353 47.61 T 09-03-2017 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 NA29_RS20210 72bf83ca1be19b430b20e861027fed57 398 Gene3D G3DSA:3.30.70.20 239 294 1.0E-6 T 09-03-2017 NA29_RS20210 72bf83ca1be19b430b20e861027fed57 398 SUPERFAMILY SSF54862 229 351 2.47E-15 T 09-03-2017 NA29_RS20210 72bf83ca1be19b430b20e861027fed57 398 Pfam PF08331 Domain of unknown function (DUF1730) 77 162 2.3E-21 T 09-03-2017 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 NA29_RS14190 a40f21e80ecfd10078a20cf1da8d316d 70 PRINTS PR00050 Cold shock protein signature 25 34 6.6E-15 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS14190 a40f21e80ecfd10078a20cf1da8d316d 70 PRINTS PR00050 Cold shock protein signature 43 61 6.6E-15 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS14190 a40f21e80ecfd10078a20cf1da8d316d 70 PRINTS PR00050 Cold shock protein signature 4 19 6.6E-15 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS14190 a40f21e80ecfd10078a20cf1da8d316d 70 PIRSF PIRSF002599 1 70 1.3E-20 T 09-03-2017 IPR012156 Cold shock, CspA GO:0003676 NA29_RS14190 a40f21e80ecfd10078a20cf1da8d316d 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 09-03-2017 IPR019844 Cold-shock conserved site NA29_RS14190 a40f21e80ecfd10078a20cf1da8d316d 70 Gene3D G3DSA:2.40.50.140 1 68 1.2E-28 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS14190 a40f21e80ecfd10078a20cf1da8d316d 70 SMART SM00357 3 70 2.1E-26 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 NA29_RS14190 a40f21e80ecfd10078a20cf1da8d316d 70 SUPERFAMILY SSF50249 1 68 1.03E-22 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS14190 a40f21e80ecfd10078a20cf1da8d316d 70 Pfam PF00313 'Cold-shock' DNA-binding domain 3 68 6.7E-28 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS21150 9629e7c7087d48a98add5a1b5aa1c7f3 254 SMART SM00257 40 84 2.9E-13 T 09-03-2017 IPR018392 LysM domain NA29_RS21150 9629e7c7087d48a98add5a1b5aa1c7f3 254 SUPERFAMILY SSF51261 45 251 1.1E-44 T 09-03-2017 IPR011055 Duplicated hybrid motif NA29_RS21150 9629e7c7087d48a98add5a1b5aa1c7f3 254 Pfam PF01476 LysM domain 41 83 3.0E-11 T 09-03-2017 IPR018392 LysM domain NA29_RS21150 9629e7c7087d48a98add5a1b5aa1c7f3 254 Gene3D G3DSA:2.70.70.10 114 252 7.9E-40 T 09-03-2017 NA29_RS21150 9629e7c7087d48a98add5a1b5aa1c7f3 254 Gene3D G3DSA:3.10.350.10 40 84 4.3E-17 T 09-03-2017 IPR018392 LysM domain NA29_RS21150 9629e7c7087d48a98add5a1b5aa1c7f3 254 Pfam PF01551 Peptidase family M23 152 247 9.5E-31 T 09-03-2017 IPR016047 Peptidase M23 NA29_RS12495 46aaf068e1db5828d890214405895e5a 146 Gene3D G3DSA:2.30.30.240 35 95 2.7E-19 T 09-03-2017 NA29_RS12495 46aaf068e1db5828d890214405895e5a 146 Pfam PF05239 PRC-barrel domain 37 112 2.2E-17 T 09-03-2017 IPR027275 PRC-barrel domain NA29_RS12495 46aaf068e1db5828d890214405895e5a 146 SUPERFAMILY SSF50346 9 145 9.61E-28 T 09-03-2017 IPR011033 PRC-barrel-like NA29_RS11615 4379964899b6562c4409cf45a41b8638 151 SMART SM00422 1 70 5.5E-19 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS11615 4379964899b6562c4409cf45a41b8638 151 Gene3D G3DSA:1.10.1660.10 1 55 9.2E-23 T 09-03-2017 NA29_RS11615 4379964899b6562c4409cf45a41b8638 151 Pfam PF00376 MerR family regulatory protein 2 39 1.7E-12 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS11615 4379964899b6562c4409cf45a41b8638 151 Gene3D G3DSA:1.10.1660.10 56 122 3.0E-13 T 09-03-2017 NA29_RS11615 4379964899b6562c4409cf45a41b8638 151 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS11615 4379964899b6562c4409cf45a41b8638 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.5E-10 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS11615 4379964899b6562c4409cf45a41b8638 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.5E-10 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS11615 4379964899b6562c4409cf45a41b8638 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.5E-10 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS11615 4379964899b6562c4409cf45a41b8638 151 Pfam PF09278 MerR, DNA binding 44 106 5.1E-17 T 09-03-2017 IPR015358 Transcription regulator MerR, DNA binding NA29_RS11615 4379964899b6562c4409cf45a41b8638 151 SUPERFAMILY SSF46955 1 113 3.66E-27 T 09-03-2017 IPR009061 Putative DNA-binding domain NA29_RS09120 e92edd55d5f70813361ab1eb92965cfa 114 Pfam PF13663 Domain of unknown function (DUF4148) 1 55 8.2E-13 T 09-03-2017 IPR025421 Protein of unknown function DUF4148 NA29_RS09305 d5e1cad0e3ed385a7b1ff95b6bfd78a5 181 ProSitePatterns PS00622 LuxR-type HTH domain signature. 138 165 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS09305 d5e1cad0e3ed385a7b1ff95b6bfd78a5 181 SUPERFAMILY SSF55785 6 115 1.52E-15 T 09-03-2017 IPR000014 PAS domain NA29_RS09305 d5e1cad0e3ed385a7b1ff95b6bfd78a5 181 SMART SM00421 121 178 2.2E-17 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS09305 d5e1cad0e3ed385a7b1ff95b6bfd78a5 181 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 119 1.4E-13 T 09-03-2017 IPR000014 PAS domain NA29_RS09305 d5e1cad0e3ed385a7b1ff95b6bfd78a5 181 Pfam PF13426 PAS domain 14 115 3.2E-12 T 09-03-2017 IPR000014 PAS domain NA29_RS09305 d5e1cad0e3ed385a7b1ff95b6bfd78a5 181 Pfam PF00196 Bacterial regulatory proteins, luxR family 123 176 7.9E-16 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS09305 d5e1cad0e3ed385a7b1ff95b6bfd78a5 181 Gene3D G3DSA:3.30.450.20 6 115 6.6E-15 T 09-03-2017 NA29_RS09305 d5e1cad0e3ed385a7b1ff95b6bfd78a5 181 SUPERFAMILY SSF46894 110 179 5.44E-17 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS09305 d5e1cad0e3ed385a7b1ff95b6bfd78a5 181 Gene3D G3DSA:1.10.10.10 124 179 1.8E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS09305 d5e1cad0e3ed385a7b1ff95b6bfd78a5 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 166 1.2E-9 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS09305 d5e1cad0e3ed385a7b1ff95b6bfd78a5 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 124 138 1.2E-9 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS09305 d5e1cad0e3ed385a7b1ff95b6bfd78a5 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 154 1.2E-9 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS02240 8d11c0e1e1abc7631cd4ed848e5c0c78 321 Gene3D G3DSA:1.20.1270.10 140 202 6.8E-4 T 09-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 NA29_RS02240 8d11c0e1e1abc7631cd4ed848e5c0c78 321 Pfam PF02470 MlaD protein 44 113 2.2E-12 T 09-03-2017 IPR003399 Mce/MlaD NA29_RS09880 a54279e0fe6220e65f18cb888684e88c 468 Pfam PF02954 Bacterial regulatory protein, Fis family 415 453 3.2E-12 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS09880 a54279e0fe6220e65f18cb888684e88c 468 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NA29_RS09880 a54279e0fe6220e65f18cb888684e88c 468 Gene3D G3DSA:3.40.50.300 135 309 2.4E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09880 a54279e0fe6220e65f18cb888684e88c 468 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 456 1.8E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS09880 a54279e0fe6220e65f18cb888684e88c 468 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 436 1.8E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS09880 a54279e0fe6220e65f18cb888684e88c 468 SMART SM00382 157 301 5.7E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS09880 a54279e0fe6220e65f18cb888684e88c 468 SUPERFAMILY SSF52540 137 366 5.43E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09880 a54279e0fe6220e65f18cb888684e88c 468 Gene3D G3DSA:1.10.10.60 350 455 2.6E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS09880 a54279e0fe6220e65f18cb888684e88c 468 SUPERFAMILY SSF46689 411 455 3.0E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS09880 a54279e0fe6220e65f18cb888684e88c 468 Pfam PF00158 Sigma-54 interaction domain 138 304 9.7E-63 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NA29_RS08085 1637b5ba37aa0a669531de2610b9ff38 405 SUPERFAMILY SSF103473 14 402 3.92E-62 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS08085 1637b5ba37aa0a669531de2610b9ff38 405 Gene3D G3DSA:1.20.1250.20 18 195 1.3E-30 T 09-03-2017 NA29_RS08085 1637b5ba37aa0a669531de2610b9ff38 405 Gene3D G3DSA:1.20.1250.20 220 400 2.8E-6 T 09-03-2017 NA29_RS08085 1637b5ba37aa0a669531de2610b9ff38 405 Pfam PF07690 Major Facilitator Superfamily 23 362 4.0E-40 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS08085 1637b5ba37aa0a669531de2610b9ff38 405 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 17 395 9.9E-96 T 09-03-2017 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 NA29_RS11180 1b140be1e0b9998783fa13c8745a587a 296 Gene3D G3DSA:3.40.190.10 182 256 7.1E-9 T 09-03-2017 NA29_RS11180 1b140be1e0b9998783fa13c8745a587a 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.1E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11180 1b140be1e0b9998783fa13c8745a587a 296 Gene3D G3DSA:3.40.190.10 95 181 3.4E-20 T 09-03-2017 NA29_RS11180 1b140be1e0b9998783fa13c8745a587a 296 Gene3D G3DSA:1.10.10.10 6 88 2.2E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11180 1b140be1e0b9998783fa13c8745a587a 296 SUPERFAMILY SSF53850 91 293 5.43E-34 T 09-03-2017 NA29_RS11180 1b140be1e0b9998783fa13c8745a587a 296 SUPERFAMILY SSF46785 5 115 4.45E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11180 1b140be1e0b9998783fa13c8745a587a 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 8.0E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11180 1b140be1e0b9998783fa13c8745a587a 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 8.0E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11180 1b140be1e0b9998783fa13c8745a587a 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 8.0E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11180 1b140be1e0b9998783fa13c8745a587a 296 Pfam PF03466 LysR substrate binding domain 91 288 1.2E-29 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS13215 57f3b2346250a4df3f3fa6207a516f7d 463 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 462 1.3E-103 T 09-03-2017 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 NA29_RS13215 57f3b2346250a4df3f3fa6207a516f7d 463 SMART SM00228 225 291 1.2E-10 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS13215 57f3b2346250a4df3f3fa6207a516f7d 463 SUPERFAMILY SSF50156 90 201 1.04E-5 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS13215 57f3b2346250a4df3f3fa6207a516f7d 463 SUPERFAMILY SSF50156 225 300 5.78E-17 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS13215 57f3b2346250a4df3f3fa6207a516f7d 463 Gene3D G3DSA:2.30.42.10 220 301 9.2E-21 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS13215 57f3b2346250a4df3f3fa6207a516f7d 463 Gene3D G3DSA:2.30.42.10 97 204 1.8E-8 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS13215 57f3b2346250a4df3f3fa6207a516f7d 463 Pfam PF02163 Peptidase family M50 9 449 4.1E-77 T 09-03-2017 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 NA29_RS13215 57f3b2346250a4df3f3fa6207a516f7d 463 Pfam PF13180 PDZ domain 232 298 2.1E-9 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS20855 aa2115ce9048c803c2149bb6f92cf13e 723 Gene3D G3DSA:1.10.150.20 669 723 5.7E-21 T 09-03-2017 NA29_RS20855 aa2115ce9048c803c2149bb6f92cf13e 723 Pfam PF14520 Helix-hairpin-helix domain 672 722 4.7E-6 T 09-03-2017 NA29_RS20855 aa2115ce9048c803c2149bb6f92cf13e 723 Hamap MF_00203 UvrABC system protein C [uvrC]. 14 721 26.525 T 09-03-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 NA29_RS20855 aa2115ce9048c803c2149bb6f92cf13e 723 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 450 656 3.7E-46 T 09-03-2017 IPR001162 UvrC family homology region NA29_RS20855 aa2115ce9048c803c2149bb6f92cf13e 723 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 19 293 4.7E-94 T 09-03-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 NA29_RS20855 aa2115ce9048c803c2149bb6f92cf13e 723 SMART SM00465 27 108 1.1E-20 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily NA29_RS20855 aa2115ce9048c803c2149bb6f92cf13e 723 Pfam PF02151 UvrB/uvrC motif 213 246 3.3E-6 T 09-03-2017 IPR001943 UVR domain GO:0005515 NA29_RS20855 aa2115ce9048c803c2149bb6f92cf13e 723 SUPERFAMILY SSF46600 200 252 1.24E-11 T 09-03-2017 IPR001943 UVR domain GO:0005515 NA29_RS20855 aa2115ce9048c803c2149bb6f92cf13e 723 Pfam PF01541 GIY-YIG catalytic domain 29 103 3.1E-9 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily NA29_RS20855 aa2115ce9048c803c2149bb6f92cf13e 723 Gene3D G3DSA:3.40.1440.10 28 107 6.4E-9 T 09-03-2017 IPR027299 GIY-YIG domain NA29_RS20855 aa2115ce9048c803c2149bb6f92cf13e 723 SUPERFAMILY SSF82771 26 110 3.79E-23 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily NA29_RS20855 aa2115ce9048c803c2149bb6f92cf13e 723 SUPERFAMILY SSF47781 621 723 1.37E-19 T 09-03-2017 IPR010994 RuvA domain 2-like NA29_RS20855 aa2115ce9048c803c2149bb6f92cf13e 723 Gene3D G3DSA:4.10.860.10 192 252 5.5E-16 T 09-03-2017 IPR001943 UVR domain GO:0005515 NA29_RS20855 aa2115ce9048c803c2149bb6f92cf13e 723 SMART SM00278 702 721 81.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NA29_RS20855 aa2115ce9048c803c2149bb6f92cf13e 723 SMART SM00278 670 689 3.2 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NA29_RS22230 f0a2001d13f837bd5741c10a83ee1c1b 453 SUPERFAMILY SSF56059 83 348 6.89E-72 T 09-03-2017 NA29_RS22230 f0a2001d13f837bd5741c10a83ee1c1b 453 SMART SM00878 336 441 5.9E-65 T 09-03-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 NA29_RS22230 f0a2001d13f837bd5741c10a83ee1c1b 453 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.4E-45 T 09-03-2017 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 NA29_RS22230 f0a2001d13f837bd5741c10a83ee1c1b 453 SUPERFAMILY SSF51246 331 443 2.88E-43 T 09-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 NA29_RS22230 f0a2001d13f837bd5741c10a83ee1c1b 453 SUPERFAMILY SSF52440 1 113 2.3E-48 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS22230 f0a2001d13f837bd5741c10a83ee1c1b 453 Gene3D G3DSA:3.30.1490.20 130 203 4.9E-29 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NA29_RS22230 f0a2001d13f837bd5741c10a83ee1c1b 453 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 2.5E-79 T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NA29_RS22230 f0a2001d13f837bd5741c10a83ee1c1b 453 Gene3D G3DSA:3.30.470.20 204 444 2.6E-97 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS22230 f0a2001d13f837bd5741c10a83ee1c1b 453 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.2E-38 T 09-03-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 NA29_RS22230 f0a2001d13f837bd5741c10a83ee1c1b 453 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 2.4E-222 T 09-03-2017 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 NA29_RS22230 f0a2001d13f837bd5741c10a83ee1c1b 453 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NA29_RS22230 f0a2001d13f837bd5741c10a83ee1c1b 453 Gene3D G3DSA:3.40.50.20 1 129 2.2E-52 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS22230 f0a2001d13f837bd5741c10a83ee1c1b 453 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NA29_RS00210 5cfba649c1413235199a45eb523eb9c5 198 Gene3D G3DSA:2.60.120.10 54 193 1.5E-26 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS00210 5cfba649c1413235199a45eb523eb9c5 198 SUPERFAMILY SSF51182 14 192 2.25E-37 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS04240 dc23f1ca399347140f6100e33644f052 297 PIRSF PIRSF029730 7 266 8.8E-81 T 09-03-2017 IPR011227 Uncharacterised conserved protein UCP029730 NA29_RS04240 dc23f1ca399347140f6100e33644f052 297 SUPERFAMILY SSF53187 21 254 5.02E-65 T 09-03-2017 NA29_RS04240 dc23f1ca399347140f6100e33644f052 297 Pfam PF05013 N-formylglutamate amidohydrolase 30 235 1.4E-39 T 09-03-2017 IPR007709 N-formylglutamate amidohydrolase NA29_RS04240 dc23f1ca399347140f6100e33644f052 297 Gene3D G3DSA:3.40.630.40 27 255 2.9E-69 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 SUPERFAMILY SSF82866 830 1029 1.57E-42 T 09-03-2017 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 Gene3D G3DSA:1.20.1640.10 285 495 6.5E-59 T 09-03-2017 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 SUPERFAMILY SSF82866 290 490 1.26E-48 T 09-03-2017 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 SUPERFAMILY SSF82714 722 804 1.23E-19 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 Pfam PF00873 AcrB/AcrD/AcrF family 4 1027 0.0 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 SUPERFAMILY SSF82693 574 669 7.32E-16 T 09-03-2017 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 Gene3D G3DSA:3.30.70.1430 577 663 7.9E-11 T 09-03-2017 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 Gene3D G3DSA:3.30.70.1430 40 142 2.8E-29 T 09-03-2017 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 SUPERFAMILY SSF82693 138 182 3.49E-21 T 09-03-2017 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 SUPERFAMILY SSF82693 268 324 3.49E-21 T 09-03-2017 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 Gene3D G3DSA:1.10.3850.10 813 1029 1.0E-53 T 09-03-2017 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 SUPERFAMILY SSF82693 676 720 3.45E-5 T 09-03-2017 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 SUPERFAMILY SSF82693 807 853 3.45E-5 T 09-03-2017 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 SUPERFAMILY SSF82693 40 133 1.15E-22 T 09-03-2017 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 PRINTS PR00702 Acriflavin resistance protein family signature 624 638 1.8E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.8E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.8E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.8E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.8E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.8E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.8E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.8E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 Gene3D G3DSA:3.30.2090.10 183 263 7.4E-16 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 Gene3D G3DSA:3.30.2090.10 722 804 1.3E-21 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS19640 fe28266eb7a826f33cf14ff385bf93dc 1054 SUPERFAMILY SSF82714 183 265 4.97E-16 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS15100 9385897bb128959a9810e75b650fd1ff 69 ProSitePatterns PS00622 LuxR-type HTH domain signature. 15 42 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS15100 9385897bb128959a9810e75b650fd1ff 69 Pfam PF00196 Bacterial regulatory proteins, luxR family 1 55 8.5E-15 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS15100 9385897bb128959a9810e75b650fd1ff 69 SMART SM00421 1 55 1.2E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS15100 9385897bb128959a9810e75b650fd1ff 69 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 1 15 1.8E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS15100 9385897bb128959a9810e75b650fd1ff 69 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 15 31 1.8E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS15100 9385897bb128959a9810e75b650fd1ff 69 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 31 43 1.8E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS15100 9385897bb128959a9810e75b650fd1ff 69 Gene3D G3DSA:1.10.10.10 1 61 1.2E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15100 9385897bb128959a9810e75b650fd1ff 69 SUPERFAMILY SSF46894 1 62 2.82E-17 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS03710 6f3d1c0a6da6c64725e3c49d57fec9d6 398 PRINTS PR00799 Aspartate aminotransferase signature 206 218 8.0E-38 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 NA29_RS03710 6f3d1c0a6da6c64725e3c49d57fec9d6 398 PRINTS PR00799 Aspartate aminotransferase signature 273 298 8.0E-38 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 NA29_RS03710 6f3d1c0a6da6c64725e3c49d57fec9d6 398 PRINTS PR00799 Aspartate aminotransferase signature 341 359 8.0E-38 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 NA29_RS03710 6f3d1c0a6da6c64725e3c49d57fec9d6 398 PRINTS PR00799 Aspartate aminotransferase signature 175 194 8.0E-38 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 NA29_RS03710 6f3d1c0a6da6c64725e3c49d57fec9d6 398 SUPERFAMILY SSF53383 1 396 1.35E-121 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS03710 6f3d1c0a6da6c64725e3c49d57fec9d6 398 Pfam PF00155 Aminotransferase class I and II 26 392 4.1E-79 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS03710 6f3d1c0a6da6c64725e3c49d57fec9d6 398 Gene3D G3DSA:3.40.640.10 45 314 8.5E-109 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS23795 a00b5464ef3e1220b7e64a4166d45c71 177 PIRSF PIRSF002162 1 177 4.6E-47 T 09-03-2017 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23795 a00b5464ef3e1220b7e64a4166d45c71 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 09-03-2017 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23795 a00b5464ef3e1220b7e64a4166d45c71 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 3.7E-74 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 NA29_RS23795 a00b5464ef3e1220b7e64a4166d45c71 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.437 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 NA29_RS23795 a00b5464ef3e1220b7e64a4166d45c71 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.1E-32 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 NA29_RS23795 a00b5464ef3e1220b7e64a4166d45c71 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.1E-32 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 NA29_RS23795 a00b5464ef3e1220b7e64a4166d45c71 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.1E-32 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 NA29_RS23795 a00b5464ef3e1220b7e64a4166d45c71 177 SUPERFAMILY SSF56053 1 82 2.22E-24 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23795 a00b5464ef3e1220b7e64a4166d45c71 177 Gene3D G3DSA:3.90.930.12 83 177 1.4E-40 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23795 a00b5464ef3e1220b7e64a4166d45c71 177 Pfam PF00347 Ribosomal protein L6 12 82 7.9E-15 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23795 a00b5464ef3e1220b7e64a4166d45c71 177 Pfam PF00347 Ribosomal protein L6 90 164 2.4E-19 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23795 a00b5464ef3e1220b7e64a4166d45c71 177 SUPERFAMILY SSF56053 83 177 6.28E-36 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23795 a00b5464ef3e1220b7e64a4166d45c71 177 Gene3D G3DSA:3.90.930.12 2 82 1.1E-27 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS05405 69f80fb469d709e1f89f3996cd8b7b49 459 SUPERFAMILY SSF53383 10 446 7.2E-114 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS05405 69f80fb469d709e1f89f3996cd8b7b49 459 Gene3D G3DSA:3.40.640.10 66 340 1.5E-80 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS05405 69f80fb469d709e1f89f3996cd8b7b49 459 Gene3D G3DSA:3.90.1150.10 4 64 4.0E-39 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS05405 69f80fb469d709e1f89f3996cd8b7b49 459 Gene3D G3DSA:3.90.1150.10 343 448 4.0E-39 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS05405 69f80fb469d709e1f89f3996cd8b7b49 459 Pfam PF00202 Aminotransferase class-III 30 443 1.9E-98 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS05405 69f80fb469d709e1f89f3996cd8b7b49 459 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 289 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS15555 238ff3c3106469212bf268685626e22e 572 Gene3D G3DSA:3.90.800.10 106 214 6.1E-45 T 09-03-2017 NA29_RS15555 238ff3c3106469212bf268685626e22e 572 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 562 52.464 T 09-03-2017 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 NA29_RS15555 238ff3c3106469212bf268685626e22e 572 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 29 563 5.8E-213 T 09-03-2017 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 NA29_RS15555 238ff3c3106469212bf268685626e22e 572 Gene3D G3DSA:2.40.240.10 474 560 7.5E-34 T 09-03-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 NA29_RS15555 238ff3c3106469212bf268685626e22e 572 Gene3D G3DSA:2.40.240.10 358 473 3.0E-46 T 09-03-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 NA29_RS15555 238ff3c3106469212bf268685626e22e 572 Gene3D G3DSA:1.10.1160.10 272 348 3.8E-35 T 09-03-2017 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 NA29_RS15555 238ff3c3106469212bf268685626e22e 572 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 29 341 2.2E-99 T 09-03-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 NA29_RS15555 238ff3c3106469212bf268685626e22e 572 Gene3D G3DSA:3.40.50.620 29 97 1.8E-39 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS15555 238ff3c3106469212bf268685626e22e 572 Gene3D G3DSA:3.40.50.620 217 271 1.8E-39 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS15555 238ff3c3106469212bf268685626e22e 572 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 350 541 1.2E-57 T 09-03-2017 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 NA29_RS15555 238ff3c3106469212bf268685626e22e 572 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 35 46 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS15555 238ff3c3106469212bf268685626e22e 572 SUPERFAMILY SSF50715 350 561 2.25E-73 T 09-03-2017 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 NA29_RS15555 238ff3c3106469212bf268685626e22e 572 SUPERFAMILY SSF52374 29 356 2.15E-89 T 09-03-2017 NA29_RS15555 238ff3c3106469212bf268685626e22e 572 PRINTS PR00987 Glutamyl-tRNA synthetase signature 61 74 7.8E-10 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 NA29_RS15555 238ff3c3106469212bf268685626e22e 572 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 44 7.8E-10 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 NA29_RS15555 238ff3c3106469212bf268685626e22e 572 PRINTS PR00987 Glutamyl-tRNA synthetase signature 215 225 7.8E-10 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 NA29_RS15555 238ff3c3106469212bf268685626e22e 572 PRINTS PR00987 Glutamyl-tRNA synthetase signature 46 57 7.8E-10 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 NA29_RS21585 b10e160e93147f3431ee7994e901fd7e 490 Pfam PF02321 Outer membrane efflux protein 33 215 5.7E-20 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS21585 b10e160e93147f3431ee7994e901fd7e 490 Pfam PF02321 Outer membrane efflux protein 239 433 1.8E-26 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS21585 b10e160e93147f3431ee7994e901fd7e 490 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 28 450 2.1E-88 T 09-03-2017 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 NA29_RS21585 b10e160e93147f3431ee7994e901fd7e 490 SUPERFAMILY SSF56954 30 450 5.75E-79 T 09-03-2017 NA29_RS21585 b10e160e93147f3431ee7994e901fd7e 490 Gene3D G3DSA:1.20.1600.10 23 442 1.3E-67 T 09-03-2017 NA29_RS07400 b60449164fca3e3a3c65f9f5f6098c2b 328 SUPERFAMILY SSF53850 28 258 4.84E-28 T 09-03-2017 NA29_RS07400 b60449164fca3e3a3c65f9f5f6098c2b 328 Pfam PF09084 NMT1/THI5 like 43 252 3.0E-24 T 09-03-2017 IPR015168 SsuA/THI5-like NA29_RS07400 b60449164fca3e3a3c65f9f5f6098c2b 328 Gene3D G3DSA:3.40.190.10 116 236 8.6E-15 T 09-03-2017 NA29_RS06430 5aa4db9d9c8ca34b184a64d070bd8ba0 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.2E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06430 5aa4db9d9c8ca34b184a64d070bd8ba0 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.2E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06430 5aa4db9d9c8ca34b184a64d070bd8ba0 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.2E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06430 5aa4db9d9c8ca34b184a64d070bd8ba0 307 Pfam PF03466 LysR substrate binding domain 90 294 1.4E-40 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS06430 5aa4db9d9c8ca34b184a64d070bd8ba0 307 Gene3D G3DSA:3.40.190.10 93 174 1.7E-24 T 09-03-2017 NA29_RS06430 5aa4db9d9c8ca34b184a64d070bd8ba0 307 SUPERFAMILY SSF46785 5 88 2.09E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06430 5aa4db9d9c8ca34b184a64d070bd8ba0 307 Gene3D G3DSA:3.40.190.10 175 273 5.7E-33 T 09-03-2017 NA29_RS06430 5aa4db9d9c8ca34b184a64d070bd8ba0 307 Gene3D G3DSA:1.10.10.10 4 89 2.7E-30 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06430 5aa4db9d9c8ca34b184a64d070bd8ba0 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.8E-23 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06430 5aa4db9d9c8ca34b184a64d070bd8ba0 307 SUPERFAMILY SSF53850 91 297 3.67E-35 T 09-03-2017 NA29_RS21155 6fc23631960f7affe581a7aac2481864 785 Pfam PF00535 Glycosyl transferase family 2 194 376 8.1E-22 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 NA29_RS21155 6fc23631960f7affe581a7aac2481864 785 Gene3D G3DSA:3.90.550.10 194 337 3.8E-5 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS21155 6fc23631960f7affe581a7aac2481864 785 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 37 693 48.945 T 09-03-2017 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 NA29_RS21155 6fc23631960f7affe581a7aac2481864 785 SUPERFAMILY SSF53448 192 479 1.02E-28 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS22380 cb0bd4f393d3c30df85d951275edf5c9 204 Pfam PF01121 Dephospho-CoA kinase 4 180 2.3E-62 T 09-03-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 NA29_RS22380 cb0bd4f393d3c30df85d951275edf5c9 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 188 5.1E-53 T 09-03-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 NA29_RS22380 cb0bd4f393d3c30df85d951275edf5c9 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.899 T 09-03-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 NA29_RS22380 cb0bd4f393d3c30df85d951275edf5c9 204 Gene3D G3DSA:3.40.50.300 2 197 1.3E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22380 cb0bd4f393d3c30df85d951275edf5c9 204 SUPERFAMILY SSF52540 1 191 8.27E-38 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03165 32093fae7ab3fe66b36962b383bded74 422 Gene3D G3DSA:3.30.70.360 236 338 1.2E-32 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS03165 32093fae7ab3fe66b36962b383bded74 422 Pfam PF01546 Peptidase family M20/M25/M40 90 415 1.0E-35 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NA29_RS03165 32093fae7ab3fe66b36962b383bded74 422 SUPERFAMILY SSF53187 345 416 1.34E-83 T 09-03-2017 NA29_RS03165 32093fae7ab3fe66b36962b383bded74 422 SUPERFAMILY SSF53187 6 233 1.34E-83 T 09-03-2017 NA29_RS03165 32093fae7ab3fe66b36962b383bded74 422 PIRSF PIRSF001235 12 422 3.2E-122 T 09-03-2017 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 NA29_RS03165 32093fae7ab3fe66b36962b383bded74 422 Gene3D G3DSA:3.40.630.10 360 417 4.0E-103 T 09-03-2017 NA29_RS03165 32093fae7ab3fe66b36962b383bded74 422 Gene3D G3DSA:3.40.630.10 8 235 4.0E-103 T 09-03-2017 NA29_RS03165 32093fae7ab3fe66b36962b383bded74 422 SUPERFAMILY SSF55031 223 338 8.55E-24 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS03165 32093fae7ab3fe66b36962b383bded74 422 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 16 416 1.3E-114 T 09-03-2017 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 NA29_RS03165 32093fae7ab3fe66b36962b383bded74 422 Pfam PF07687 Peptidase dimerisation domain 222 321 8.4E-7 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS18845 1cdadaa455eab66202b47902c8c1d3ae 627 Pfam PF00501 AMP-binding enzyme 63 481 1.0E-54 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS18845 1cdadaa455eab66202b47902c8c1d3ae 627 SUPERFAMILY SSF56801 36 518 9.94E-76 T 09-03-2017 NA29_RS18845 1cdadaa455eab66202b47902c8c1d3ae 627 Gene3D G3DSA:2.30.38.10 402 460 7.2E-10 T 09-03-2017 NA29_RS18845 1cdadaa455eab66202b47902c8c1d3ae 627 Gene3D G3DSA:3.40.50.980 229 395 2.4E-19 T 09-03-2017 NA29_RS18845 1cdadaa455eab66202b47902c8c1d3ae 627 Gene3D G3DSA:3.40.50.980 62 228 3.4E-17 T 09-03-2017 NA29_RS18190 3d6c8186131a5ea044455e377a7de9f1 148 Pfam PF01042 Endoribonuclease L-PSP 22 139 1.0E-16 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family NA29_RS18190 3d6c8186131a5ea044455e377a7de9f1 148 SUPERFAMILY SSF55298 23 140 1.73E-23 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS18190 3d6c8186131a5ea044455e377a7de9f1 148 Gene3D G3DSA:3.30.1330.40 19 141 2.2E-32 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS01080 b325bcf2d375e2a912fd201a2a13eaa9 404 Gene3D G3DSA:3.30.750.80 73 185 4.1E-37 T 09-03-2017 NA29_RS01080 b325bcf2d375e2a912fd201a2a13eaa9 404 Gene3D G3DSA:2.30.130.10 1 71 2.0E-24 T 09-03-2017 IPR015947 PUA-like domain NA29_RS01080 b325bcf2d375e2a912fd201a2a13eaa9 404 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 191 359 2.4E-31 T 09-03-2017 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 NA29_RS01080 b325bcf2d375e2a912fd201a2a13eaa9 404 Gene3D G3DSA:3.40.50.150 192 402 3.5E-60 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS01080 b325bcf2d375e2a912fd201a2a13eaa9 404 SMART SM00359 2 87 2.9E-16 T 09-03-2017 IPR002478 PUA domain GO:0003723 NA29_RS01080 b325bcf2d375e2a912fd201a2a13eaa9 404 SUPERFAMILY SSF53335 78 400 2.07E-67 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS01080 b325bcf2d375e2a912fd201a2a13eaa9 404 SUPERFAMILY SSF88697 1 71 2.73E-16 T 09-03-2017 IPR015947 PUA-like domain NA29_RS09030 4259bf8b1c7e55742bbade1a9b50c70f 198 Gene3D G3DSA:3.40.50.450 3 191 2.7E-75 T 09-03-2017 NA29_RS09030 4259bf8b1c7e55742bbade1a9b50c70f 198 SUPERFAMILY SSF102405 5 183 7.63E-63 T 09-03-2017 NA29_RS09030 4259bf8b1c7e55742bbade1a9b50c70f 198 Pfam PF03641 Possible lysine decarboxylase 50 180 6.0E-43 T 09-03-2017 IPR031100 LOG family NA29_RS09030 4259bf8b1c7e55742bbade1a9b50c70f 198 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 6 182 5.6E-64 T 09-03-2017 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG NA29_RS05255 8f523fb56d6c3dd3a94d7fb756ee8eb9 502 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 188 197 1.2E-9 T 09-03-2017 NA29_RS05255 8f523fb56d6c3dd3a94d7fb756ee8eb9 502 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 230 255 1.2E-9 T 09-03-2017 NA29_RS05255 8f523fb56d6c3dd3a94d7fb756ee8eb9 502 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 48 70 1.2E-9 T 09-03-2017 NA29_RS05255 8f523fb56d6c3dd3a94d7fb756ee8eb9 502 SUPERFAMILY SSF51905 48 365 5.9E-29 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS05255 8f523fb56d6c3dd3a94d7fb756ee8eb9 502 Gene3D G3DSA:3.50.50.60 191 356 4.5E-14 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS05255 8f523fb56d6c3dd3a94d7fb756ee8eb9 502 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 49 68 3.1E-7 T 09-03-2017 NA29_RS05255 8f523fb56d6c3dd3a94d7fb756ee8eb9 502 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 185 203 3.1E-7 T 09-03-2017 NA29_RS05255 8f523fb56d6c3dd3a94d7fb756ee8eb9 502 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 248 3.1E-7 T 09-03-2017 NA29_RS05255 8f523fb56d6c3dd3a94d7fb756ee8eb9 502 Gene3D G3DSA:3.50.50.60 48 190 4.2E-15 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS05255 8f523fb56d6c3dd3a94d7fb756ee8eb9 502 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 47 269 2.5E-16 T 09-03-2017 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase NA29_RS13610 cadad354af74cf2d532fdc597101ecbb 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.5E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13610 cadad354af74cf2d532fdc597101ecbb 312 Gene3D G3DSA:1.10.10.10 1 82 2.7E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13610 cadad354af74cf2d532fdc597101ecbb 312 SUPERFAMILY SSF46785 3 113 1.52E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13610 cadad354af74cf2d532fdc597101ecbb 312 Pfam PF03466 LysR substrate binding domain 89 294 5.0E-43 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS13610 cadad354af74cf2d532fdc597101ecbb 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.6E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13610 cadad354af74cf2d532fdc597101ecbb 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.6E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13610 cadad354af74cf2d532fdc597101ecbb 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.6E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13610 cadad354af74cf2d532fdc597101ecbb 312 Gene3D G3DSA:3.40.190.10 184 263 6.8E-29 T 09-03-2017 NA29_RS13610 cadad354af74cf2d532fdc597101ecbb 312 SUPERFAMILY SSF53850 90 298 1.74E-43 T 09-03-2017 NA29_RS13610 cadad354af74cf2d532fdc597101ecbb 312 Gene3D G3DSA:3.40.190.10 90 183 1.4E-23 T 09-03-2017 NA29_RS13865 433cdee43f56487a09023f8a1f191a5a 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 1.2E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13865 433cdee43f56487a09023f8a1f191a5a 304 SUPERFAMILY SSF46785 9 92 2.72E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13865 433cdee43f56487a09023f8a1f191a5a 304 Pfam PF03466 LysR substrate binding domain 93 298 1.6E-36 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS13865 433cdee43f56487a09023f8a1f191a5a 304 Gene3D G3DSA:1.10.10.10 9 91 3.3E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13865 433cdee43f56487a09023f8a1f191a5a 304 SUPERFAMILY SSF53850 95 298 3.08E-39 T 09-03-2017 NA29_RS13865 433cdee43f56487a09023f8a1f191a5a 304 Gene3D G3DSA:3.40.190.10 183 267 1.9E-18 T 09-03-2017 NA29_RS13865 433cdee43f56487a09023f8a1f191a5a 304 Gene3D G3DSA:3.40.190.10 97 182 4.5E-21 T 09-03-2017 NA29_RS03120 b020548e60b1f26d379d7c65a080638b 355 SUPERFAMILY SSF51197 48 335 3.71E-43 T 09-03-2017 NA29_RS03120 b020548e60b1f26d379d7c65a080638b 355 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 51 317 2.3E-24 T 09-03-2017 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 NA29_RS03120 b020548e60b1f26d379d7c65a080638b 355 Gene3D G3DSA:3.60.130.10 54 325 2.7E-32 T 09-03-2017 NA29_RS17915 4468a9d114efefeeab87c6fd74dc9ca6 296 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 291 8.2E-83 T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 NA29_RS17915 4468a9d114efefeeab87c6fd74dc9ca6 296 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 141 153 - T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 NA29_RS17915 4468a9d114efefeeab87c6fd74dc9ca6 296 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 285 1.5E-78 T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 NA29_RS17915 4468a9d114efefeeab87c6fd74dc9ca6 296 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 290 20.345 T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 NA29_RS02695 2bf83bf483e10e55b265dee839ab070e 289 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 8 285 3.4E-77 T 09-03-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 NA29_RS02695 2bf83bf483e10e55b265dee839ab070e 289 PIRSF PIRSF010376 5 287 5.3E-88 T 09-03-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 NA29_RS02695 2bf83bf483e10e55b265dee839ab070e 289 SUPERFAMILY SSF55060 161 287 3.26E-28 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain NA29_RS02695 2bf83bf483e10e55b265dee839ab070e 289 Pfam PF00288 GHMP kinases N terminal domain 89 145 3.0E-9 T 09-03-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 NA29_RS02695 2bf83bf483e10e55b265dee839ab070e 289 SUPERFAMILY SSF54211 9 157 1.06E-45 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS02695 2bf83bf483e10e55b265dee839ab070e 289 Gene3D G3DSA:3.30.230.10 9 160 2.4E-53 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NA29_RS02695 2bf83bf483e10e55b265dee839ab070e 289 Gene3D G3DSA:3.30.70.890 162 287 5.6E-35 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain NA29_RS02695 2bf83bf483e10e55b265dee839ab070e 289 Pfam PF08544 GHMP kinases C terminal 217 272 9.7E-8 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain NA29_RS02695 2bf83bf483e10e55b265dee839ab070e 289 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 279 32.443 T 09-03-2017 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 NA29_RS24050 d57e6bacca67423ca08b16aea72eb6a2 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 65 120 10.533 T 09-03-2017 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 NA29_RS24050 d57e6bacca67423ca08b16aea72eb6a2 126 Gene3D G3DSA:1.20.5.1030 64 121 2.5E-22 T 09-03-2017 NA29_RS24050 d57e6bacca67423ca08b16aea72eb6a2 126 PRINTS PR01650 Bacterial translocase SecE signature 88 108 8.8E-19 T 09-03-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 NA29_RS24050 d57e6bacca67423ca08b16aea72eb6a2 126 PRINTS PR01650 Bacterial translocase SecE signature 43 64 8.8E-19 T 09-03-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 NA29_RS24050 d57e6bacca67423ca08b16aea72eb6a2 126 PRINTS PR01650 Bacterial translocase SecE signature 64 84 8.8E-19 T 09-03-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 NA29_RS24050 d57e6bacca67423ca08b16aea72eb6a2 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 68 123 3.1E-16 T 09-03-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 NA29_RS24050 d57e6bacca67423ca08b16aea72eb6a2 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 69 119 6.5E-17 T 09-03-2017 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 NA29_RS15925 7ce3f0a1a89d89bd5031c82701d19a3b 176 SUPERFAMILY SSF55021 91 168 1.87E-12 T 09-03-2017 NA29_RS15925 7ce3f0a1a89d89bd5031c82701d19a3b 176 Gene3D G3DSA:3.30.70.260 2 78 2.3E-19 T 09-03-2017 NA29_RS15925 7ce3f0a1a89d89bd5031c82701d19a3b 176 SUPERFAMILY SSF55021 2 77 3.87E-12 T 09-03-2017 NA29_RS15925 7ce3f0a1a89d89bd5031c82701d19a3b 176 PIRSF PIRSF028103 1 173 2.1E-44 T 09-03-2017 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 NA29_RS15925 7ce3f0a1a89d89bd5031c82701d19a3b 176 Pfam PF13740 ACT domain 4 76 5.1E-17 T 09-03-2017 NA29_RS15925 7ce3f0a1a89d89bd5031c82701d19a3b 176 Gene3D G3DSA:3.30.70.260 90 171 6.3E-21 T 09-03-2017 NA29_RS09045 5e47bb1955df32472eef3edf01d5b22b 344 Gene3D G3DSA:3.40.50.2000 170 307 5.3E-19 T 09-03-2017 NA29_RS09045 5e47bb1955df32472eef3edf01d5b22b 344 Pfam PF13439 Glycosyltransferase Family 4 14 165 1.5E-18 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 NA29_RS09045 5e47bb1955df32472eef3edf01d5b22b 344 SUPERFAMILY SSF53756 1 331 3.57E-67 T 09-03-2017 NA29_RS09045 5e47bb1955df32472eef3edf01d5b22b 344 Pfam PF13692 Glycosyl transferases group 1 180 295 5.0E-18 T 09-03-2017 NA29_RS11105 87d35e02973ba1e79d547c0296d57455 497 Gene3D G3DSA:2.60.40.10 66 195 3.4E-25 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS11105 87d35e02973ba1e79d547c0296d57455 497 Pfam PF00756 Putative esterase 234 458 1.6E-23 T 09-03-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 NA29_RS11105 87d35e02973ba1e79d547c0296d57455 497 SUPERFAMILY SSF53474 214 459 4.92E-40 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS11105 87d35e02973ba1e79d547c0296d57455 497 Gene3D G3DSA:3.40.50.1820 209 463 2.1E-57 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS11105 87d35e02973ba1e79d547c0296d57455 497 Pfam PF11806 Domain of unknown function (DUF3327) 109 215 5.6E-22 T 09-03-2017 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 NA29_RS11105 87d35e02973ba1e79d547c0296d57455 497 SUPERFAMILY SSF81296 65 211 3.5E-26 T 09-03-2017 IPR014756 Immunoglobulin E-set NA29_RS24790 251d12e510c74d16c2555a98ef1dea0e 123 Pfam PF01312 FlhB HrpN YscU SpaS Family 9 81 2.3E-18 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS24790 251d12e510c74d16c2555a98ef1dea0e 123 Gene3D G3DSA:3.40.1690.10 8 85 1.0E-23 T 09-03-2017 IPR029025 Type III secretion system substrate exporter, C-terminal NA29_RS24790 251d12e510c74d16c2555a98ef1dea0e 123 SUPERFAMILY SSF160544 8 85 1.06E-22 T 09-03-2017 IPR029025 Type III secretion system substrate exporter, C-terminal NA29_RS21620 48e27a35a99a26e4a14adcc81d064e6d 380 Pfam PF00534 Glycosyl transferases group 1 188 350 3.5E-33 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 NA29_RS21620 48e27a35a99a26e4a14adcc81d064e6d 380 Pfam PF13439 Glycosyltransferase Family 4 13 169 2.7E-22 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 NA29_RS21620 48e27a35a99a26e4a14adcc81d064e6d 380 SUPERFAMILY SSF53756 2 371 7.33E-85 T 09-03-2017 NA29_RS21620 48e27a35a99a26e4a14adcc81d064e6d 380 Gene3D G3DSA:3.40.50.2000 156 350 1.3E-28 T 09-03-2017 NA29_RS02630 c9a53781da1d4b9ac2bafebf607bfc33 474 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 203 474 59.326 T 09-03-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 NA29_RS02630 c9a53781da1d4b9ac2bafebf607bfc33 474 SMART SM00962 274 474 1.5E-109 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 NA29_RS02630 c9a53781da1d4b9ac2bafebf607bfc33 474 Pfam PF00448 SRP54-type protein, GTPase domain 274 474 1.0E-72 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 NA29_RS02630 c9a53781da1d4b9ac2bafebf607bfc33 474 SMART SM00963 184 260 6.4E-20 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 NA29_RS02630 c9a53781da1d4b9ac2bafebf607bfc33 474 SMART SM00382 273 452 7.4E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS02630 c9a53781da1d4b9ac2bafebf607bfc33 474 Gene3D G3DSA:3.40.50.300 286 474 1.4E-78 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02630 c9a53781da1d4b9ac2bafebf607bfc33 474 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 447 460 - T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 NA29_RS02630 c9a53781da1d4b9ac2bafebf607bfc33 474 Gene3D G3DSA:1.20.120.140 204 285 2.3E-28 T 09-03-2017 NA29_RS02630 c9a53781da1d4b9ac2bafebf607bfc33 474 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 203 473 5.8E-102 T 09-03-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 NA29_RS02630 c9a53781da1d4b9ac2bafebf607bfc33 474 Pfam PF02881 SRP54-type protein, helical bundle domain 193 255 3.0E-12 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 NA29_RS02630 c9a53781da1d4b9ac2bafebf607bfc33 474 SUPERFAMILY SSF52540 272 473 1.51E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02630 c9a53781da1d4b9ac2bafebf607bfc33 474 SUPERFAMILY SSF47364 179 253 3.53E-18 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 NA29_RS00030 3e2246757c6f1ccf92119efec3d4b200 443 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 309 408 2.3E-12 T 09-03-2017 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 NA29_RS00030 3e2246757c6f1ccf92119efec3d4b200 443 SUPERFAMILY SSF53613 7 269 7.74E-10 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS00030 3e2246757c6f1ccf92119efec3d4b200 443 SUPERFAMILY SSF52309 308 428 1.89E-18 T 09-03-2017 NA29_RS00030 3e2246757c6f1ccf92119efec3d4b200 443 Gene3D G3DSA:3.40.1190.20 7 271 4.4E-4 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS00030 3e2246757c6f1ccf92119efec3d4b200 443 Gene3D G3DSA:3.40.50.1810 309 435 1.1E-14 T 09-03-2017 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 NA29_RS10240 a372610f4a6a15928aa7414281a925e8 877 Pfam PF08245 Mur ligase middle domain 486 698 2.9E-15 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS10240 a372610f4a6a15928aa7414281a925e8 877 Pfam PF02875 Mur ligase family, glutamate ligase domain 723 797 4.4E-9 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS10240 a372610f4a6a15928aa7414281a925e8 877 Gene3D G3DSA:3.30.470.20 318 452 2.2E-6 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS10240 a372610f4a6a15928aa7414281a925e8 877 Gene3D G3DSA:3.30.470.20 212 231 2.2E-6 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS10240 a372610f4a6a15928aa7414281a925e8 877 SUPERFAMILY SSF53623 481 715 2.22E-31 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS10240 a372610f4a6a15928aa7414281a925e8 877 Gene3D G3DSA:3.90.190.20 725 850 3.8E-20 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS10240 a372610f4a6a15928aa7414281a925e8 877 Gene3D G3DSA:3.30.1490.20 232 302 6.1E-19 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NA29_RS10240 a372610f4a6a15928aa7414281a925e8 877 SMART SM01209 218 339 0.0078 T 09-03-2017 NA29_RS10240 a372610f4a6a15928aa7414281a925e8 877 SUPERFAMILY SSF56059 219 494 4.82E-36 T 09-03-2017 NA29_RS10240 a372610f4a6a15928aa7414281a925e8 877 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 7 861 0.0 T 09-03-2017 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 NA29_RS10240 a372610f4a6a15928aa7414281a925e8 877 SUPERFAMILY SSF53244 723 861 1.22E-20 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS10240 a372610f4a6a15928aa7414281a925e8 877 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 219 305 6.3E-8 T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NA29_RS10240 a372610f4a6a15928aa7414281a925e8 877 Gene3D G3DSA:3.40.1190.10 480 715 1.1E-32 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS06020 ba21d9d520ab8a5369b756ad9da4974c 415 SUPERFAMILY SSF47203 271 408 7.09E-23 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS06020 ba21d9d520ab8a5369b756ad9da4974c 415 Gene3D G3DSA:1.20.140.10 235 408 7.5E-32 T 09-03-2017 NA29_RS06020 ba21d9d520ab8a5369b756ad9da4974c 415 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 280 391 1.6E-13 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS06020 ba21d9d520ab8a5369b756ad9da4974c 415 SUPERFAMILY SSF56645 25 241 2.49E-36 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NA29_RS06020 ba21d9d520ab8a5369b756ad9da4974c 415 Gene3D G3DSA:1.10.540.10 10 101 4.3E-13 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS06020 ba21d9d520ab8a5369b756ad9da4974c 415 Gene3D G3DSA:2.40.110.10 140 234 1.7E-25 T 09-03-2017 NA29_RS06020 ba21d9d520ab8a5369b756ad9da4974c 415 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 232 3.6E-9 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NA29_RS17230 4cefbcb8e8d54ed02e860b8b55587c64 559 SUPERFAMILY SSF56601 11 340 6.2E-69 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS17230 4cefbcb8e8d54ed02e860b8b55587c64 559 Gene3D G3DSA:3.40.710.10 22 333 3.0E-66 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS17230 4cefbcb8e8d54ed02e860b8b55587c64 559 Pfam PF00144 Beta-lactamase 21 334 8.2E-56 T 09-03-2017 IPR001466 Beta-lactamase-related NA29_RS01650 3d447a854529abe50d1992eb8b6e28bb 165 SUPERFAMILY SSF55729 8 165 6.03E-28 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS01650 3d447a854529abe50d1992eb8b6e28bb 165 Gene3D G3DSA:3.40.630.30 9 165 6.7E-29 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS01650 3d447a854529abe50d1992eb8b6e28bb 165 Pfam PF00583 Acetyltransferase (GNAT) family 73 142 3.1E-9 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS02745 e4767302d6ad6cfca9b117c7bb198f87 496 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 494 1.5E-141 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NA29_RS02745 e4767302d6ad6cfca9b117c7bb198f87 496 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 384 403 - T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NA29_RS02745 e4767302d6ad6cfca9b117c7bb198f87 496 Pfam PF04963 Sigma-54 factor, core binding domain 135 323 2.9E-57 T 09-03-2017 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 NA29_RS02745 e4767302d6ad6cfca9b117c7bb198f87 496 PRINTS PR00045 Sigma-54 factor signature 396 408 3.7E-28 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NA29_RS02745 e4767302d6ad6cfca9b117c7bb198f87 496 PRINTS PR00045 Sigma-54 factor signature 412 423 3.7E-28 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NA29_RS02745 e4767302d6ad6cfca9b117c7bb198f87 496 PRINTS PR00045 Sigma-54 factor signature 207 224 3.7E-28 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NA29_RS02745 e4767302d6ad6cfca9b117c7bb198f87 496 PRINTS PR00045 Sigma-54 factor signature 470 488 3.7E-28 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NA29_RS02745 e4767302d6ad6cfca9b117c7bb198f87 496 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 2.9E-15 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NA29_RS02745 e4767302d6ad6cfca9b117c7bb198f87 496 PIRSF PIRSF000774 1 496 8.8E-154 T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NA29_RS02745 e4767302d6ad6cfca9b117c7bb198f87 496 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 475 482 - T 09-03-2017 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NA29_RS02745 e4767302d6ad6cfca9b117c7bb198f87 496 Pfam PF04552 Sigma-54, DNA binding domain 339 494 2.8E-66 T 09-03-2017 IPR007634 RNA polymerase sigma factor 54, DNA-binding NA29_RS24040 45a4f58de1883c958e52008f6c47386e 143 SUPERFAMILY SSF46906 68 141 2.62E-27 T 09-03-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 NA29_RS24040 45a4f58de1883c958e52008f6c47386e 143 SMART SM00649 9 141 1.2E-86 T 09-03-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 NA29_RS24040 45a4f58de1883c958e52008f6c47386e 143 Gene3D G3DSA:1.10.10.250 73 141 2.9E-32 T 09-03-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 NA29_RS24040 45a4f58de1883c958e52008f6c47386e 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.738 T 09-03-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 NA29_RS24040 45a4f58de1883c958e52008f6c47386e 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 5.0E-15 T 09-03-2017 NA29_RS24040 45a4f58de1883c958e52008f6c47386e 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 3.6E-64 T 09-03-2017 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS24040 45a4f58de1883c958e52008f6c47386e 143 Gene3D G3DSA:3.30.1550.10 2 72 7.9E-37 T 09-03-2017 IPR020784 Ribosomal protein L11, N-terminal NA29_RS24040 45a4f58de1883c958e52008f6c47386e 143 SUPERFAMILY SSF54747 3 73 4.84E-30 T 09-03-2017 IPR020784 Ribosomal protein L11, N-terminal NA29_RS24040 45a4f58de1883c958e52008f6c47386e 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 09-03-2017 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS24040 45a4f58de1883c958e52008f6c47386e 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 4.8E-29 T 09-03-2017 IPR020784 Ribosomal protein L11, N-terminal NA29_RS24040 45a4f58de1883c958e52008f6c47386e 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 3.3E-25 T 09-03-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 NA29_RS12040 9447a93995b3e6b00c64ab18451159b3 266 Gene3D G3DSA:3.40.50.620 127 266 1.4E-17 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS12040 9447a93995b3e6b00c64ab18451159b3 266 Pfam PF00582 Universal stress protein family 143 264 8.4E-10 T 09-03-2017 IPR006016 UspA GO:0006950 NA29_RS12040 9447a93995b3e6b00c64ab18451159b3 266 PRINTS PR01438 Universal stress protein signature 226 238 2.3E-8 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS12040 9447a93995b3e6b00c64ab18451159b3 266 PRINTS PR01438 Universal stress protein signature 143 161 2.3E-8 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS12040 9447a93995b3e6b00c64ab18451159b3 266 PRINTS PR01438 Universal stress protein signature 244 266 2.3E-8 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS12040 9447a93995b3e6b00c64ab18451159b3 266 SUPERFAMILY SSF52402 142 264 1.17E-18 T 09-03-2017 NA29_RS12040 9447a93995b3e6b00c64ab18451159b3 266 SUPERFAMILY SSF52402 1 134 2.76E-6 T 09-03-2017 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 TIGRFAM TIGR01340 aconitase_mito: aconitate hydratase, mitochondrial 14 761 4.6E-288 T 09-03-2017 IPR006248 Aconitase, mitochondrial-like GO:0003994|GO:0006099|GO:0051539 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 Gene3D G3DSA:3.40.1060.10 200 317 6.0E-35 T 09-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 SUPERFAMILY SSF53732 12 512 2.09E-145 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 Pfam PF00330 Aconitase family (aconitate hydratase) 54 488 6.8E-141 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 Pfam PF00694 Aconitase C-terminal domain 568 698 1.6E-33 T 09-03-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 PRINTS PR00415 Aconitase family signature 366 377 6.7E-33 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 PRINTS PR00415 Aconitase family signature 166 181 6.7E-33 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 PRINTS PR00415 Aconitase family signature 425 438 6.7E-33 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 PRINTS PR00415 Aconitase family signature 322 336 6.7E-33 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 PRINTS PR00415 Aconitase family signature 152 165 6.7E-33 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 PRINTS PR00415 Aconitase family signature 132 140 6.7E-33 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 PRINTS PR00415 Aconitase family signature 228 241 6.7E-33 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 PRINTS PR00415 Aconitase family signature 242 255 6.7E-33 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 PRINTS PR00415 Aconitase family signature 109 122 6.7E-33 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 ProSitePatterns PS00450 Aconitase family signature 1. 362 378 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 Gene3D G3DSA:3.30.499.10 13 197 2.0E-60 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 ProSitePatterns PS01244 Aconitase family signature 2. 425 438 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 Gene3D G3DSA:3.20.19.10 548 764 3.3E-66 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 Gene3D G3DSA:3.30.499.10 318 499 8.3E-55 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS11505 bca8394903fc5aa65384e3a69bb22485 767 SUPERFAMILY SSF52016 543 763 2.55E-56 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS11210 e9d3143582de1f72ddb1783657da95a9 375 Gene3D G3DSA:3.30.565.10 261 357 5.7E-17 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS11210 e9d3143582de1f72ddb1783657da95a9 375 Gene3D G3DSA:3.30.565.10 201 221 5.7E-17 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS11210 e9d3143582de1f72ddb1783657da95a9 375 Pfam PF07730 Histidine kinase 157 224 1.6E-12 T 09-03-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NA29_RS11210 e9d3143582de1f72ddb1783657da95a9 375 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 354 7.5E-5 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS11210 e9d3143582de1f72ddb1783657da95a9 375 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 313 7.5E-5 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS11210 e9d3143582de1f72ddb1783657da95a9 375 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 335 7.5E-5 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS11210 e9d3143582de1f72ddb1783657da95a9 375 SMART SM00387 263 357 3.1E-14 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS11210 e9d3143582de1f72ddb1783657da95a9 375 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 136 3.8E-16 T 09-03-2017 IPR000014 PAS domain NA29_RS11210 e9d3143582de1f72ddb1783657da95a9 375 SUPERFAMILY SSF55785 20 127 2.44E-21 T 09-03-2017 IPR000014 PAS domain NA29_RS11210 e9d3143582de1f72ddb1783657da95a9 375 Gene3D G3DSA:3.30.450.20 9 129 1.8E-20 T 09-03-2017 NA29_RS11210 e9d3143582de1f72ddb1783657da95a9 375 SUPERFAMILY SSF55874 218 355 3.14E-21 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS11210 e9d3143582de1f72ddb1783657da95a9 375 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 267 355 1.9E-10 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS11210 e9d3143582de1f72ddb1783657da95a9 375 Pfam PF08448 PAS fold 21 131 3.0E-19 T 09-03-2017 IPR013656 PAS fold-4 NA29_RS05495 b83e4de61249335076c217ebc3545fcc 548 SUPERFAMILY SSF48592 406 521 1.07E-76 T 09-03-2017 NA29_RS05495 b83e4de61249335076c217ebc3545fcc 548 SUPERFAMILY SSF48592 7 134 1.07E-76 T 09-03-2017 NA29_RS05495 b83e4de61249335076c217ebc3545fcc 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 548 41.464 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 NA29_RS05495 b83e4de61249335076c217ebc3545fcc 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 5.5E-254 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 NA29_RS05495 b83e4de61249335076c217ebc3545fcc 548 Gene3D G3DSA:1.10.560.10 4 188 8.5E-48 T 09-03-2017 IPR027413 GroEL-like equatorial domain NA29_RS05495 b83e4de61249335076c217ebc3545fcc 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.2E-98 T 09-03-2017 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 NA29_RS05495 b83e4de61249335076c217ebc3545fcc 548 SUPERFAMILY SSF52029 185 376 1.94E-82 T 09-03-2017 IPR027409 GroEL-like apical domain NA29_RS05495 b83e4de61249335076c217ebc3545fcc 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 09-03-2017 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 NA29_RS05495 b83e4de61249335076c217ebc3545fcc 548 Gene3D G3DSA:3.50.7.10 189 368 9.5E-99 T 09-03-2017 IPR027409 GroEL-like apical domain NA29_RS05495 b83e4de61249335076c217ebc3545fcc 548 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 NA29_RS05495 b83e4de61249335076c217ebc3545fcc 548 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 NA29_RS05495 b83e4de61249335076c217ebc3545fcc 548 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 NA29_RS05495 b83e4de61249335076c217ebc3545fcc 548 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 NA29_RS05495 b83e4de61249335076c217ebc3545fcc 548 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 NA29_RS05495 b83e4de61249335076c217ebc3545fcc 548 SUPERFAMILY SSF54849 137 203 2.98E-25 T 09-03-2017 NA29_RS05495 b83e4de61249335076c217ebc3545fcc 548 Gene3D G3DSA:1.10.560.10 369 518 6.2E-41 T 09-03-2017 IPR027413 GroEL-like equatorial domain NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 292 417 1.8E-27 T 09-03-2017 IPR000014 PAS domain NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 Pfam PF00989 PAS fold 295 407 3.5E-20 T 09-03-2017 IPR013767 PAS fold GO:0006355 NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 Gene3D G3DSA:3.30.450.20 408 537 1.8E-9 T 09-03-2017 NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 Gene3D G3DSA:3.30.450.20 281 407 7.8E-24 T 09-03-2017 NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 Gene3D G3DSA:3.30.565.10 631 791 9.0E-42 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 SUPERFAMILY SSF47384 556 629 9.42E-7 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 SMART SM00086 368 410 1.4E-6 T 09-03-2017 IPR001610 PAC motif NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 Pfam PF13188 PAS domain 422 478 0.0069 T 09-03-2017 IPR000014 PAS domain NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 SMART SM00388 561 631 8.3E-5 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 SUPERFAMILY SSF55785 407 537 1.73E-9 T 09-03-2017 IPR000014 PAS domain NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 675 791 3.7E-18 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 SUPERFAMILY SSF55785 281 408 1.19E-25 T 09-03-2017 IPR000014 PAS domain NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 SMART SM00091 294 361 3.7E-9 T 09-03-2017 IPR000014 PAS domain NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 SMART SM00091 422 489 59.0 T 09-03-2017 IPR000014 PAS domain NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 SMART SM00387 673 792 4.2E-31 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 SUPERFAMILY SSF55874 622 790 4.06E-38 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 748 766 2.4E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 737 747 2.4E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 776 789 2.4E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS14325 795fe54e2043901a0c7bfc8580d01ddc 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 719 733 2.4E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS25145 dc43a40c6d8f2a13c86253e047989b7a 598 Gene3D G3DSA:3.40.50.300 340 593 6.7E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25145 dc43a40c6d8f2a13c86253e047989b7a 598 SUPERFAMILY SSF52540 341 594 4.37E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25145 dc43a40c6d8f2a13c86253e047989b7a 598 Pfam PF00005 ABC transporter 359 524 3.8E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS25145 dc43a40c6d8f2a13c86253e047989b7a 598 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 574 595 4.8E-10 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS25145 dc43a40c6d8f2a13c86253e047989b7a 598 Pfam PF02653 Branched-chain amino acid transport system / permease component 31 300 3.0E-36 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS25145 dc43a40c6d8f2a13c86253e047989b7a 598 SMART SM00382 367 581 6.2E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 SMART SM01193 4 134 7.5E-96 T 09-03-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 SUPERFAMILY SSF51604 139 426 4.53E-130 T 09-03-2017 IPR029065 Enolase C-terminal domain-like NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 PRINTS PR00148 Enolase signature 363 380 4.6E-45 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 PRINTS PR00148 Enolase signature 161 174 4.6E-45 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 PRINTS PR00148 Enolase signature 311 322 4.6E-45 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 PRINTS PR00148 Enolase signature 37 51 4.6E-45 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 PRINTS PR00148 Enolase signature 334 348 4.6E-45 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 PRINTS PR00148 Enolase signature 107 123 4.6E-45 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 ProSitePatterns PS00164 Enolase signature. 334 347 - T 09-03-2017 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 Hamap MF_00318 Enolase [eno]. 2 411 44.902 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 Gene3D G3DSA:3.20.20.120 128 424 6.9E-136 T 09-03-2017 IPR029065 Enolase C-terminal domain-like NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 424 6.8E-133 T 09-03-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 Gene3D G3DSA:3.30.390.10 4 126 1.2E-55 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 PIRSF PIRSF001400 1 425 7.6E-193 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 Pfam PF03952 Enolase, N-terminal domain 4 133 4.9E-60 T 09-03-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 425 2.5E-210 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 SMART SM01192 139 425 7.9E-223 T 09-03-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS15205 36ccde33a492a625ebc73a56fa61774b 427 SUPERFAMILY SSF54826 4 136 2.41E-56 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS02325 96a1d725fa29e24d0d5fff9939a485c3 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 269 4.1E-24 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS02325 96a1d725fa29e24d0d5fff9939a485c3 278 SUPERFAMILY SSF161098 75 261 2.62E-34 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS02325 96a1d725fa29e24d0d5fff9939a485c3 278 Gene3D G3DSA:1.10.3720.10 75 268 4.6E-24 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS21385 6c0898b64ed7477bf8df842dab501181 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 75 1.5E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21385 6c0898b64ed7477bf8df842dab501181 316 SUPERFAMILY SSF46785 10 124 6.9E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21385 6c0898b64ed7477bf8df842dab501181 316 Gene3D G3DSA:3.40.190.10 104 203 6.8E-19 T 09-03-2017 NA29_RS21385 6c0898b64ed7477bf8df842dab501181 316 Gene3D G3DSA:1.10.10.10 13 95 5.1E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21385 6c0898b64ed7477bf8df842dab501181 316 SUPERFAMILY SSF53850 102 301 1.27E-38 T 09-03-2017 NA29_RS21385 6c0898b64ed7477bf8df842dab501181 316 Pfam PF03466 LysR substrate binding domain 100 299 3.8E-34 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS02395 e08c9a1c0708119a5eeabe74e8002ca2 429 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 17 422 1.3E-197 T 09-03-2017 IPR011718 Glutamate--cysteine ligase GshA NA29_RS02395 e08c9a1c0708119a5eeabe74e8002ca2 429 Pfam PF08886 Glutamate-cysteine ligase 17 419 2.9E-200 T 09-03-2017 IPR011718 Glutamate--cysteine ligase GshA NA29_RS02395 e08c9a1c0708119a5eeabe74e8002ca2 429 SUPERFAMILY SSF56059 275 356 4.37E-5 T 09-03-2017 NA29_RS14380 6661d376b72ec13d556ba57b72a717cb 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 261 279 4.2E-8 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS14380 6661d376b72ec13d556ba57b72a717cb 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 194 214 4.2E-8 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS14380 6661d376b72ec13d556ba57b72a717cb 389 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 215 233 4.2E-8 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS14380 6661d376b72ec13d556ba57b72a717cb 389 Pfam PF13167 GTP-binding GTPase N-terminal 18 106 4.2E-30 T 09-03-2017 IPR025121 GTPase HflX, N-terminal NA29_RS14380 6661d376b72ec13d556ba57b72a717cb 389 Pfam PF01926 50S ribosome-binding GTPase 194 312 2.6E-21 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS14380 6661d376b72ec13d556ba57b72a717cb 389 SUPERFAMILY SSF52540 192 367 8.56E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14380 6661d376b72ec13d556ba57b72a717cb 389 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 5 357 2.7E-149 T 09-03-2017 IPR016496 GTPase HflX GO:0005525 NA29_RS14380 6661d376b72ec13d556ba57b72a717cb 389 Hamap MF_00900 GTPase HflX [hflX]. 21 376 45.737 T 09-03-2017 IPR016496 GTPase HflX GO:0005525 NA29_RS14380 6661d376b72ec13d556ba57b72a717cb 389 PIRSF PIRSF006809 2 387 5.7E-140 T 09-03-2017 IPR016496 GTPase HflX GO:0005525 NA29_RS14380 6661d376b72ec13d556ba57b72a717cb 389 Gene3D G3DSA:3.40.50.300 192 358 6.6E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14380 6661d376b72ec13d556ba57b72a717cb 389 Pfam PF16360 GTP-binding GTPase Middle Region 108 186 1.2E-29 T 09-03-2017 IPR032305 GTP-binding protein, middle domain NA29_RS10850 8a0d4324634b6f5c2526caaafcafc65f 383 Pfam PF01757 Acyltransferase family 16 355 1.2E-21 T 09-03-2017 IPR002656 Acyltransferase 3 GO:0016747 NA29_RS21685 0ee706f1552e1d6d96777e3c7f1a87b3 173 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site NA29_RS21685 0ee706f1552e1d6d96777e3c7f1a87b3 173 Gene3D G3DSA:3.30.700.10 17 167 1.8E-22 T 09-03-2017 NA29_RS21685 0ee706f1552e1d6d96777e3c7f1a87b3 173 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 36 4.2E-9 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site NA29_RS21685 0ee706f1552e1d6d96777e3c7f1a87b3 173 SUPERFAMILY SSF54523 17 165 5.76E-18 T 09-03-2017 NA29_RS21685 0ee706f1552e1d6d96777e3c7f1a87b3 173 Pfam PF13633 Prokaryotic N-terminal methylation site 15 39 1.9E-10 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site NA29_RS21685 0ee706f1552e1d6d96777e3c7f1a87b3 173 Pfam PF00114 Pilin (bacterial filament) 45 165 1.3E-9 T 09-03-2017 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 NA29_RS04270 d7b3fdb6dff725d623b3d382e16c9bc5 408 Gene3D G3DSA:1.20.1250.20 6 178 1.7E-9 T 09-03-2017 NA29_RS04270 d7b3fdb6dff725d623b3d382e16c9bc5 408 Gene3D G3DSA:1.20.1250.20 199 401 9.2E-20 T 09-03-2017 NA29_RS04270 d7b3fdb6dff725d623b3d382e16c9bc5 408 SUPERFAMILY SSF103473 4 399 4.36E-31 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS04270 d7b3fdb6dff725d623b3d382e16c9bc5 408 Pfam PF03825 Nucleoside H+ symporter 1 396 3.9E-73 T 09-03-2017 NA29_RS04185 bb69756e453d56f5e32dd9d29001341a 139 Pfam PF00581 Rhodanese-like domain 46 127 1.7E-11 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS04185 bb69756e453d56f5e32dd9d29001341a 139 SMART SM00450 35 132 4.5E-10 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS04185 bb69756e453d56f5e32dd9d29001341a 139 Gene3D G3DSA:3.40.250.10 34 133 2.3E-17 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS04185 bb69756e453d56f5e32dd9d29001341a 139 SUPERFAMILY SSF52821 24 133 5.76E-22 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 848 875 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 Gene3D G3DSA:3.30.70.20 153 216 1.1E-14 T 09-03-2017 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 PIRSF PIRSF036643 16 951 0.0 T 09-03-2017 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 SMART SM00929 102 142 8.9E-19 T 09-03-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 168 179 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 102 141 1.3E-16 T 09-03-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 Gene3D G3DSA:3.30.70.20 217 249 2.7E-5 T 09-03-2017 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 Pfam PF01568 Molydopterin dinucleotide binding domain 810 914 5.1E-29 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 211 222 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 Pfam PF00384 Molybdopterin oxidoreductase 295 727 3.3E-77 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 Gene3D G3DSA:3.10.20.30 15 73 2.4E-8 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 Gene3D G3DSA:3.40.228.10 373 564 7.8E-57 T 09-03-2017 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 SUPERFAMILY SSF53706 241 801 1.96E-193 T 09-03-2017 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 243 918 1.7E-285 T 09-03-2017 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 Pfam PF00037 4Fe-4S binding domain 209 224 6.8E-5 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 19 95 3.0E-24 T 09-03-2017 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 Gene3D G3DSA:3.40.50.740 565 767 3.3E-88 T 09-03-2017 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 Gene3D G3DSA:3.40.50.740 295 372 3.3E-88 T 09-03-2017 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 243 290 2.5E-15 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 SUPERFAMILY SSF54862 94 232 9.21E-38 T 09-03-2017 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 Gene3D G3DSA:2.40.40.20 768 921 6.1E-43 T 09-03-2017 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 SUPERFAMILY SSF54292 21 93 8.99E-18 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 SUPERFAMILY SSF50692 779 919 2.71E-41 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 SMART SM00926 238 292 6.6E-15 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 Gene3D G3DSA:2.20.25.90 250 293 1.5E-18 T 09-03-2017 NA29_RS16495 83427414e5bc9817ef9d564d5421f687 953 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 243 261 - T 09-03-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 394 400 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 SUPERFAMILY SSF81653 185 291 4.32E-25 T 09-03-2017 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 Pfam PF00122 E1-E2 ATPase 126 383 3.0E-58 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 SUPERFAMILY SSF56784 551 705 4.52E-37 T 09-03-2017 IPR023214 HAD-like domain NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 SMART SM00831 47 121 4.5E-11 T 09-03-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 Gene3D G3DSA:2.70.150.10 154 292 3.6E-37 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 Gene3D G3DSA:2.70.150.10 64 101 3.6E-37 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 Gene3D G3DSA:3.40.1110.10 384 567 1.1E-34 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 Gene3D G3DSA:1.20.1110.10 629 911 1.2E-69 T 09-03-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 Gene3D G3DSA:1.20.1110.10 102 153 1.2E-69 T 09-03-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 PRINTS PR01836 Magnesium-transporting ATPase signature 768 781 2.4E-78 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 PRINTS PR01836 Magnesium-transporting ATPase signature 305 321 2.4E-78 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 PRINTS PR01836 Magnesium-transporting ATPase signature 718 733 2.4E-78 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 PRINTS PR01836 Magnesium-transporting ATPase signature 873 894 2.4E-78 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 PRINTS PR01836 Magnesium-transporting ATPase signature 322 341 2.4E-78 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 PRINTS PR01836 Magnesium-transporting ATPase signature 788 804 2.4E-78 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 PRINTS PR01836 Magnesium-transporting ATPase signature 426 439 2.4E-78 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 PRINTS PR01836 Magnesium-transporting ATPase signature 736 747 2.4E-78 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 PRINTS PR01836 Magnesium-transporting ATPase signature 823 844 2.4E-78 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 48 919 0.0 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 Pfam PF00689 Cation transporting ATPase, C-terminus 743 909 3.0E-12 T 09-03-2017 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 Pfam PF00702 haloacid dehalogenase-like hydrolase 388 674 4.2E-21 T 09-03-2017 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 SUPERFAMILY SSF81660 361 564 3.71E-41 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 Pfam PF00690 Cation transporter/ATPase, N-terminus 56 116 2.7E-14 T 09-03-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 SUPERFAMILY SSF81665 293 386 8.63E-101 T 09-03-2017 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 SUPERFAMILY SSF81665 56 159 8.63E-101 T 09-03-2017 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 SUPERFAMILY SSF81665 709 917 8.63E-101 T 09-03-2017 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 290 428 4.0E-20 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 NA29_RS18365 af10140204a398e9204bc97aa3cadebc 919 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 629 749 5.2E-29 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 NA29_RS10150 77a59ff63d89581921e14eb7ff07d245 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.6E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10150 77a59ff63d89581921e14eb7ff07d245 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.6E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10150 77a59ff63d89581921e14eb7ff07d245 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.6E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10150 77a59ff63d89581921e14eb7ff07d245 301 SUPERFAMILY SSF46785 5 84 1.63E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10150 77a59ff63d89581921e14eb7ff07d245 301 Gene3D G3DSA:1.10.10.10 5 85 4.4E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10150 77a59ff63d89581921e14eb7ff07d245 301 Pfam PF03466 LysR substrate binding domain 89 293 4.1E-39 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS10150 77a59ff63d89581921e14eb7ff07d245 301 Gene3D G3DSA:3.40.190.10 180 259 1.6E-17 T 09-03-2017 NA29_RS10150 77a59ff63d89581921e14eb7ff07d245 301 SUPERFAMILY SSF53850 89 295 1.99E-41 T 09-03-2017 NA29_RS10150 77a59ff63d89581921e14eb7ff07d245 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 9.7E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10150 77a59ff63d89581921e14eb7ff07d245 301 Gene3D G3DSA:3.40.190.10 93 179 7.4E-21 T 09-03-2017 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 1.5E-31 T 09-03-2017 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.5E-31 T 09-03-2017 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.5E-31 T 09-03-2017 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 307 1.5E-31 T 09-03-2017 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 1.5E-31 T 09-03-2017 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 1.9E-70 T 09-03-2017 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 1.9E-70 T 09-03-2017 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 1.9E-70 T 09-03-2017 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 1.9E-70 T 09-03-2017 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.9E-70 T 09-03-2017 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 1.9E-70 T 09-03-2017 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 1.9E-70 T 09-03-2017 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.9E-70 T 09-03-2017 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.9E-70 T 09-03-2017 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 PIRSF PIRSF000350 1 446 1.1E-78 T 09-03-2017 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 4 449 9.5E-198 T 09-03-2017 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 SUPERFAMILY SSF55424 336 450 1.34E-34 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 Gene3D G3DSA:3.50.50.60 142 329 1.1E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 Gene3D G3DSA:3.50.50.60 4 141 5.7E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 SUPERFAMILY SSF51905 4 366 3.08E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 09-03-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 Gene3D G3DSA:3.30.390.30 340 451 1.9E-42 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 448 7.0E-34 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NA29_RS12700 1e1351d7580a6200ce34848d98dd4f95 453 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 320 3.5E-64 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS16485 5b05e6ccda99eb5130320cba06d71c44 155 PIRSF PIRSF000216 2 155 4.0E-43 T 09-03-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16485 5b05e6ccda99eb5130320cba06d71c44 155 Gene3D G3DSA:3.40.30.10 74 150 5.1E-9 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS16485 5b05e6ccda99eb5130320cba06d71c44 155 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 10 150 1.5E-40 T 09-03-2017 NA29_RS16485 5b05e6ccda99eb5130320cba06d71c44 155 SUPERFAMILY SSF52833 6 151 7.94E-46 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS16995 3ecfad44568cb81ececcef0b7b2852ba 510 SUPERFAMILY SSF47384 265 341 3.92E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS16995 3ecfad44568cb81ececcef0b7b2852ba 510 SMART SM00387 392 503 1.0E-25 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS16995 3ecfad44568cb81ececcef0b7b2852ba 510 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 502 4.6E-20 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS16995 3ecfad44568cb81ececcef0b7b2852ba 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 443 5.9E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS16995 3ecfad44568cb81ececcef0b7b2852ba 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 457 5.9E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS16995 3ecfad44568cb81ececcef0b7b2852ba 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 481 5.9E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS16995 3ecfad44568cb81ececcef0b7b2852ba 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 500 5.9E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS16995 3ecfad44568cb81ececcef0b7b2852ba 510 SUPERFAMILY SSF55874 355 502 3.41E-32 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS16995 3ecfad44568cb81ececcef0b7b2852ba 510 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 155 1.4E-16 T 09-03-2017 IPR024478 4HB MCP domain NA29_RS16995 3ecfad44568cb81ececcef0b7b2852ba 510 Gene3D G3DSA:1.10.287.130 272 330 5.0E-6 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS16995 3ecfad44568cb81ececcef0b7b2852ba 510 SUPERFAMILY SSF158472 202 249 2.22E-5 T 09-03-2017 NA29_RS16995 3ecfad44568cb81ececcef0b7b2852ba 510 Gene3D G3DSA:3.30.565.10 331 502 4.0E-32 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS20920 f77910c0f730f1d631f6c881f2192640 351 Pfam PF03888 MucB/RseB N-terminal domain 50 224 1.4E-60 T 09-03-2017 IPR033434 MucB/RseB, N-terminal NA29_RS20920 f77910c0f730f1d631f6c881f2192640 351 Pfam PF17188 MucB/RseB C-terminal domain 246 345 1.0E-25 T 09-03-2017 IPR033436 MucB/RseB, C-terminal NA29_RS20920 f77910c0f730f1d631f6c881f2192640 351 Gene3D G3DSA:2.50.20.10 99 213 5.5E-13 T 09-03-2017 NA29_RS20920 f77910c0f730f1d631f6c881f2192640 351 PIRSF PIRSF005427 14 351 8.0E-93 T 09-03-2017 IPR005588 MucB/RseB NA29_RS13475 bee28258f7ac5cb3da728c25bb3daa75 488 SUPERFAMILY SSF53686 1 487 3.38E-149 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS13475 bee28258f7ac5cb3da728c25bb3daa75 488 TIGRFAM TIGR00260 thrC: threonine synthase 112 447 1.5E-70 T 09-03-2017 IPR004450 Threonine synthase-like NA29_RS13475 bee28258f7ac5cb3da728c25bb3daa75 488 Pfam PF14821 Threonine synthase N terminus 2 83 1.3E-25 T 09-03-2017 IPR029144 Threonine synthase, N-terminal NA29_RS13475 bee28258f7ac5cb3da728c25bb3daa75 488 Gene3D G3DSA:3.90.1380.10 1 86 1.2E-28 T 09-03-2017 IPR029144 Threonine synthase, N-terminal NA29_RS13475 bee28258f7ac5cb3da728c25bb3daa75 488 Gene3D G3DSA:3.40.50.1100 220 460 7.0E-88 T 09-03-2017 NA29_RS13475 bee28258f7ac5cb3da728c25bb3daa75 488 Gene3D G3DSA:3.40.50.1100 127 219 1.5E-7 T 09-03-2017 NA29_RS13475 bee28258f7ac5cb3da728c25bb3daa75 488 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 114 349 1.1E-11 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS03820 3488ec760a9a6fce5ff80fe96774835e 369 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 13 362 3.4E-89 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 NA29_RS03820 3488ec760a9a6fce5ff80fe96774835e 369 Gene3D G3DSA:3.40.718.10 12 357 2.6E-120 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 NA29_RS03820 3488ec760a9a6fce5ff80fe96774835e 369 SUPERFAMILY SSF53659 9 364 5.58E-119 T 09-03-2017 NA29_RS03820 3488ec760a9a6fce5ff80fe96774835e 369 SMART SM01329 13 362 4.8E-187 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 NA29_RS03820 3488ec760a9a6fce5ff80fe96774835e 369 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 10 365 5.5E-167 T 09-03-2017 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 NA29_RS03820 3488ec760a9a6fce5ff80fe96774835e 369 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 251 270 - T 09-03-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 NA29_RS18670 985df619721edb77618768017ca3a8b7 1217 SUPERFAMILY SSF56801 192 727 8.11E-122 T 09-03-2017 NA29_RS18670 985df619721edb77618768017ca3a8b7 1217 Pfam PF00501 AMP-binding enzyme 200 606 1.4E-74 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS18670 985df619721edb77618768017ca3a8b7 1217 Gene3D G3DSA:3.30.300.30 602 717 3.7E-26 T 09-03-2017 NA29_RS18670 985df619721edb77618768017ca3a8b7 1217 Pfam PF07993 Male sterility protein 824 1061 8.6E-59 T 09-03-2017 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 NA29_RS18670 985df619721edb77618768017ca3a8b7 1217 SUPERFAMILY SSF51735 822 1094 1.12E-41 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18670 985df619721edb77618768017ca3a8b7 1217 Pfam PF13193 AMP-binding enzyme C-terminal domain 614 685 5.0E-7 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS18670 985df619721edb77618768017ca3a8b7 1217 Gene3D G3DSA:2.30.38.10 511 596 1.1E-23 T 09-03-2017 NA29_RS18670 985df619721edb77618768017ca3a8b7 1217 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 822 1178 1.1E-94 T 09-03-2017 IPR010080 Thioester reductase-like domain NA29_RS18670 985df619721edb77618768017ca3a8b7 1217 SUPERFAMILY SSF47336 708 782 2.36E-16 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS18670 985df619721edb77618768017ca3a8b7 1217 Gene3D G3DSA:3.40.50.980 193 371 3.6E-29 T 09-03-2017 NA29_RS18670 985df619721edb77618768017ca3a8b7 1217 Pfam PF00550 Phosphopantetheine attachment site 717 780 3.4E-13 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS18670 985df619721edb77618768017ca3a8b7 1217 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 220 627 8.3E-110 T 09-03-2017 IPR010071 Amino acid adenylation domain NA29_RS18670 985df619721edb77618768017ca3a8b7 1217 Gene3D G3DSA:3.40.50.980 372 510 2.3E-34 T 09-03-2017 NA29_RS18670 985df619721edb77618768017ca3a8b7 1217 Gene3D G3DSA:3.40.50.720 822 1123 4.8E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18670 985df619721edb77618768017ca3a8b7 1217 Gene3D G3DSA:1.10.1200.10 718 783 1.6E-21 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS15440 864e83238f9459f367dbba5bfb7ac6f4 114 Pfam PF10084 Uncharacterized protein conserved in bacteria (DUF2322) 10 110 1.0E-36 T 09-03-2017 IPR016755 Uncharacterised conserved protein UCP019302 NA29_RS15440 864e83238f9459f367dbba5bfb7ac6f4 114 PIRSF PIRSF019302 8 114 8.0E-38 T 09-03-2017 IPR016755 Uncharacterised conserved protein UCP019302 NA29_RS18520 7108e3ce30b7d1387a47a40559d8541a 344 Pfam PF00005 ABC transporter 21 169 1.1E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS18520 7108e3ce30b7d1387a47a40559d8541a 344 SMART SM00930 265 340 1.5E-29 T 09-03-2017 IPR018449 NIL domain NA29_RS18520 7108e3ce30b7d1387a47a40559d8541a 344 Gene3D G3DSA:3.40.50.300 1 236 2.7E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18520 7108e3ce30b7d1387a47a40559d8541a 344 SUPERFAMILY SSF52540 1 240 2.9E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18520 7108e3ce30b7d1387a47a40559d8541a 344 Gene3D G3DSA:3.30.70.260 237 343 2.1E-30 T 09-03-2017 NA29_RS18520 7108e3ce30b7d1387a47a40559d8541a 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS18520 7108e3ce30b7d1387a47a40559d8541a 344 SUPERFAMILY SSF55021 248 343 1.06E-22 T 09-03-2017 NA29_RS18520 7108e3ce30b7d1387a47a40559d8541a 344 SMART SM00382 30 227 5.8E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS18520 7108e3ce30b7d1387a47a40559d8541a 344 Pfam PF09383 NIL domain 268 339 3.1E-21 T 09-03-2017 IPR018449 NIL domain NA29_RS05985 369de394ba268b70ad1ba27cbe7c0294 322 Pfam PF13379 NMT1-like family 64 262 2.8E-16 T 09-03-2017 NA29_RS05985 369de394ba268b70ad1ba27cbe7c0294 322 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 42 318 3.9E-65 T 09-03-2017 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 NA29_RS05985 369de394ba268b70ad1ba27cbe7c0294 322 SUPERFAMILY SSF53850 55 259 8.16E-40 T 09-03-2017 NA29_RS05985 369de394ba268b70ad1ba27cbe7c0294 322 SMART SM00062 38 265 0.0013 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS05985 369de394ba268b70ad1ba27cbe7c0294 322 Gene3D G3DSA:3.40.190.10 118 247 3.6E-24 T 09-03-2017 NA29_RS05985 369de394ba268b70ad1ba27cbe7c0294 322 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 32 9.6E-5 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NA29_RS01645 c880492db9f5cf63162bdfc138549450 694 Pfam PF00580 UvrD/REP helicase N-terminal domain 34 142 5.8E-24 T 09-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NA29_RS01645 c880492db9f5cf63162bdfc138549450 694 Pfam PF00580 UvrD/REP helicase N-terminal domain 194 297 3.5E-26 T 09-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NA29_RS01645 c880492db9f5cf63162bdfc138549450 694 Gene3D G3DSA:3.40.50.300 565 631 6.5E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01645 c880492db9f5cf63162bdfc138549450 694 Gene3D G3DSA:3.40.50.300 307 415 6.5E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01645 c880492db9f5cf63162bdfc138549450 694 Gene3D G3DSA:1.10.486.10 416 544 1.4E-7 T 09-03-2017 NA29_RS01645 c880492db9f5cf63162bdfc138549450 694 Gene3D G3DSA:3.40.50.300 15 299 1.8E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01645 c880492db9f5cf63162bdfc138549450 694 SUPERFAMILY SSF52540 11 634 1.51E-124 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01645 c880492db9f5cf63162bdfc138549450 694 Pfam PF13361 UvrD-like helicase C-terminal domain 305 457 5.5E-19 T 09-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 NA29_RS01645 c880492db9f5cf63162bdfc138549450 694 Pfam PF13361 UvrD-like helicase C-terminal domain 565 625 3.0E-18 T 09-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 NA29_RS19315 f8449c8167f5c90127bf54620fa2f64d 109 SUPERFAMILY SSF103481 5 105 9.15E-22 T 09-03-2017 NA29_RS19315 f8449c8167f5c90127bf54620fa2f64d 109 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.1E-30 T 09-03-2017 IPR000390 Small multidrug resistance protein family GO:0016021 NA29_RS01750 df6e2b9b02cb37546108289140527e98 306 Gene3D G3DSA:3.40.190.10 165 258 4.4E-23 T 09-03-2017 NA29_RS01750 df6e2b9b02cb37546108289140527e98 306 Gene3D G3DSA:3.40.190.10 88 164 3.6E-10 T 09-03-2017 NA29_RS01750 df6e2b9b02cb37546108289140527e98 306 SUPERFAMILY SSF53850 89 292 5.12E-46 T 09-03-2017 NA29_RS01750 df6e2b9b02cb37546108289140527e98 306 Gene3D G3DSA:1.10.10.10 3 79 1.6E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01750 df6e2b9b02cb37546108289140527e98 306 Pfam PF03466 LysR substrate binding domain 88 290 6.1E-41 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS01750 df6e2b9b02cb37546108289140527e98 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.8E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01750 df6e2b9b02cb37546108289140527e98 306 SUPERFAMILY SSF46785 4 110 5.96E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 SUPERFAMILY SSF50249 3 107 4.38E-33 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 591 6.9E-246 T 09-03-2017 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 Reactome: R-HSA-379726 NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 Pfam PF02938 GAD domain 317 408 9.4E-29 T 09-03-2017 IPR029351 GAD domain Reactome: R-HSA-379726 NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 Gene3D G3DSA:3.30.1360.30 280 416 7.6E-45 T 09-03-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 567 1.1E-106 T 09-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 3 572 35.9 T 09-03-2017 NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 Gene3D G3DSA:3.30.930.10 134 279 1.9E-111 T 09-03-2017 NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 Gene3D G3DSA:3.30.930.10 417 594 1.9E-111 T 09-03-2017 NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 SUPERFAMILY SSF55261 294 419 1.61E-40 T 09-03-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 Gene3D G3DSA:2.40.50.140 3 109 4.2E-39 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 Pfam PF01336 OB-fold nucleic acid binding domain 20 104 1.3E-17 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 SUPERFAMILY SSF55681 112 295 1.55E-103 T 09-03-2017 NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 SUPERFAMILY SSF55681 433 594 1.55E-103 T 09-03-2017 NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 1.3E-26 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 527 541 1.3E-26 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 1.3E-26 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS04430 3a556978605c68c83d8ef189d95540dc 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 483 499 1.3E-26 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS24365 49d4084083656158a2f90ce941305f83 205 Gene3D G3DSA:1.20.120.80 19 187 6.5E-29 T 09-03-2017 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24365 49d4084083656158a2f90ce941305f83 205 Pfam PF00510 Cytochrome c oxidase subunit III 54 187 6.7E-8 T 09-03-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24365 49d4084083656158a2f90ce941305f83 205 SUPERFAMILY SSF81452 21 187 8.37E-32 T 09-03-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS15835 662c49074b4ad14d9921fc6cda353b64 304 Gene3D G3DSA:1.10.260.40 21 82 1.3E-16 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS15835 662c49074b4ad14d9921fc6cda353b64 304 SMART SM00530 24 78 8.6E-10 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS15835 662c49074b4ad14d9921fc6cda353b64 304 Pfam PF13560 Helix-turn-helix domain 20 76 2.2E-11 T 09-03-2017 NA29_RS15835 662c49074b4ad14d9921fc6cda353b64 304 SUPERFAMILY SSF47413 18 81 1.66E-13 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS13315 c509e290da207317599d8aef05a46e9b 383 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 10 381 6.4E-165 T 09-03-2017 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 NA29_RS13315 c509e290da207317599d8aef05a46e9b 383 Pfam PF07687 Peptidase dimerisation domain 183 289 2.7E-24 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS13315 c509e290da207317599d8aef05a46e9b 383 SUPERFAMILY SSF53187 5 186 1.1E-62 T 09-03-2017 NA29_RS13315 c509e290da207317599d8aef05a46e9b 383 SUPERFAMILY SSF53187 300 381 1.1E-62 T 09-03-2017 NA29_RS13315 c509e290da207317599d8aef05a46e9b 383 SUPERFAMILY SSF55031 187 296 1.94E-30 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS13315 c509e290da207317599d8aef05a46e9b 383 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 6 383 52.01 T 09-03-2017 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 NA29_RS13315 c509e290da207317599d8aef05a46e9b 383 Gene3D G3DSA:3.40.630.10 324 381 9.4E-74 T 09-03-2017 NA29_RS13315 c509e290da207317599d8aef05a46e9b 383 Gene3D G3DSA:3.40.630.10 4 195 9.4E-74 T 09-03-2017 NA29_RS13315 c509e290da207317599d8aef05a46e9b 383 Gene3D G3DSA:3.30.70.360 196 296 6.0E-36 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS13315 c509e290da207317599d8aef05a46e9b 383 Pfam PF01546 Peptidase family M20/M25/M40 71 379 1.7E-45 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 Pfam PF09078 CheY binding 182 244 1.8E-25 T 09-03-2017 IPR015162 CheY binding NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 SMART SM00387 462 602 2.4E-26 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 SUPERFAMILY SSF55874 420 600 1.07E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 Pfam PF01627 Hpt domain 6 104 4.7E-20 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 SUPERFAMILY SSF47384 355 418 4.71E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 SMART SM00073 3 100 1.0E-30 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 601 1.0E-16 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 Gene3D G3DSA:3.30.70.400 178 246 6.2E-26 T 09-03-2017 IPR015162 CheY binding NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 Gene3D G3DSA:3.30.565.10 419 601 7.2E-34 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 SUPERFAMILY SSF50341 601 733 2.22E-30 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 Gene3D G3DSA:1.10.287.560 354 418 2.2E-23 T 09-03-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 SUPERFAMILY SSF47226 3 127 6.67E-33 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 Gene3D G3DSA:2.40.50.180 626 689 1.1E-13 T 09-03-2017 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 Gene3D G3DSA:2.30.30.40 690 733 8.4E-23 T 09-03-2017 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 Gene3D G3DSA:2.30.30.40 602 623 8.4E-23 T 09-03-2017 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 355 417 5.3E-17 T 09-03-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 SUPERFAMILY SSF55052 181 245 2.3E-20 T 09-03-2017 IPR015162 CheY binding NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 SMART SM01231 354 417 4.3E-20 T 09-03-2017 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 Gene3D G3DSA:1.20.120.160 4 151 6.1E-42 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 SMART SM00260 594 734 6.0E-31 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 Pfam PF01584 CheW-like domain 607 733 1.8E-22 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 1.8E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 1.8E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 1.8E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS25025 8e18985c29800303b01ba7659ebd5210 746 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 521 1.8E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS16715 34a563fc39cc749b0f2d7b00ac332538 296 Gene3D G3DSA:3.20.20.140 15 294 2.0E-101 T 09-03-2017 NA29_RS16715 34a563fc39cc749b0f2d7b00ac332538 296 Pfam PF04909 Amidohydrolase 31 292 2.0E-44 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS16715 34a563fc39cc749b0f2d7b00ac332538 296 SUPERFAMILY SSF51556 27 292 2.19E-81 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS08035 55114ca6a91a6842398d5df32b38a0d6 626 Gene3D G3DSA:1.10.287.950 368 569 9.3E-58 T 09-03-2017 NA29_RS08035 55114ca6a91a6842398d5df32b38a0d6 626 SUPERFAMILY SSF103190 90 174 7.59E-10 T 09-03-2017 IPR029151 Periplasmic sensor domain-like NA29_RS08035 55114ca6a91a6842398d5df32b38a0d6 626 SMART SM00283 350 597 1.6E-85 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS08035 55114ca6a91a6842398d5df32b38a0d6 626 Pfam PF02743 Cache domain 105 257 2.7E-22 T 09-03-2017 IPR033479 Double Cache domain 1 NA29_RS08035 55114ca6a91a6842398d5df32b38a0d6 626 Gene3D G3DSA:3.30.450.20 83 150 8.6E-16 T 09-03-2017 NA29_RS08035 55114ca6a91a6842398d5df32b38a0d6 626 Gene3D G3DSA:3.30.450.20 151 271 1.5E-25 T 09-03-2017 NA29_RS08035 55114ca6a91a6842398d5df32b38a0d6 626 SUPERFAMILY SSF58104 317 598 3.4E-72 T 09-03-2017 NA29_RS08035 55114ca6a91a6842398d5df32b38a0d6 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 448 475 5.3E-48 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS08035 55114ca6a91a6842398d5df32b38a0d6 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 477 506 5.3E-48 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS08035 55114ca6a91a6842398d5df32b38a0d6 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 371 400 5.3E-48 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS08035 55114ca6a91a6842398d5df32b38a0d6 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 525 554 5.3E-48 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS08035 55114ca6a91a6842398d5df32b38a0d6 626 SMART SM00304 295 349 1.2E-8 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS08035 55114ca6a91a6842398d5df32b38a0d6 626 Pfam PF00672 HAMP domain 276 344 8.5E-11 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS08035 55114ca6a91a6842398d5df32b38a0d6 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 596 3.4E-59 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS06775 a2aa476fa7d9a5ba565181bdc815a235 346 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 15 334 8.8E-116 T 09-03-2017 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 NA29_RS06775 a2aa476fa7d9a5ba565181bdc815a235 346 Pfam PF00962 Adenosine/AMP deaminase 14 336 1.4E-74 T 09-03-2017 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 NA29_RS06775 a2aa476fa7d9a5ba565181bdc815a235 346 Gene3D G3DSA:3.20.20.140 12 339 1.7E-106 T 09-03-2017 NA29_RS06775 a2aa476fa7d9a5ba565181bdc815a235 346 SUPERFAMILY SSF51556 12 340 4.98E-92 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS06775 a2aa476fa7d9a5ba565181bdc815a235 346 Hamap MF_01962 Adenine deaminase. 10 326 84.941 T 09-03-2017 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 NA29_RS01365 2465be2bf0c3337f1b9a00f8ce2d2a59 212 PIRSF PIRSF005624 2 211 1.6E-46 T 09-03-2017 NA29_RS01365 2465be2bf0c3337f1b9a00f8ce2d2a59 212 Gene3D G3DSA:3.40.50.300 15 206 1.1E-20 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01365 2465be2bf0c3337f1b9a00f8ce2d2a59 212 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 18 188 5.5E-37 T 09-03-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain NA29_RS01365 2465be2bf0c3337f1b9a00f8ce2d2a59 212 SUPERFAMILY SSF52540 10 207 2.39E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01365 2465be2bf0c3337f1b9a00f8ce2d2a59 212 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 16 208 3.2E-97 T 09-03-2017 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 NA29_RS01365 2465be2bf0c3337f1b9a00f8ce2d2a59 212 Hamap MF_01389 Urease accessory protein UreG [ureG]. 14 212 46.913 T 09-03-2017 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 NA29_RS11835 66f033ac0fbd79de35a9863568eef465 219 SUPERFAMILY SSF51161 21 209 9.98E-39 T 09-03-2017 IPR011004 Trimeric LpxA-like NA29_RS11835 66f033ac0fbd79de35a9863568eef465 219 Gene3D G3DSA:2.160.10.10 29 208 8.4E-46 T 09-03-2017 NA29_RS11835 66f033ac0fbd79de35a9863568eef465 219 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 157 1.7E-9 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS11835 66f033ac0fbd79de35a9863568eef465 219 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 131 159 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 NA29_RS11835 66f033ac0fbd79de35a9863568eef465 219 TIGRFAM TIGR03308 phn_thr-fam: phosphonate metabolim protein, transferase hexapeptide repeat family 18 218 4.5E-79 T 09-03-2017 IPR017694 Phosphonate metabolim protein, transferase hexapeptide repeat family NA29_RS03545 1cd469632d8f00298ed3f469102b8462 615 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 338 2.6E-37 T 09-03-2017 NA29_RS03545 1cd469632d8f00298ed3f469102b8462 615 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 17 39 2.6E-37 T 09-03-2017 NA29_RS03545 1cd469632d8f00298ed3f469102b8462 615 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 338 354 2.6E-37 T 09-03-2017 NA29_RS03545 1cd469632d8f00298ed3f469102b8462 615 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 166 181 2.6E-37 T 09-03-2017 NA29_RS03545 1cd469632d8f00298ed3f469102b8462 615 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 2.6E-37 T 09-03-2017 NA29_RS03545 1cd469632d8f00298ed3f469102b8462 615 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 2.6E-37 T 09-03-2017 NA29_RS03545 1cd469632d8f00298ed3f469102b8462 615 Gene3D G3DSA:3.50.50.60 285 324 2.4E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03545 1cd469632d8f00298ed3f469102b8462 615 Gene3D G3DSA:3.50.50.60 13 177 2.4E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03545 1cd469632d8f00298ed3f469102b8462 615 SUPERFAMILY SSF51905 274 388 2.92E-67 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03545 1cd469632d8f00298ed3f469102b8462 615 SUPERFAMILY SSF51905 16 187 2.92E-67 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03545 1cd469632d8f00298ed3f469102b8462 615 Gene3D G3DSA:3.30.9.10 335 363 1.7E-10 T 09-03-2017 NA29_RS03545 1cd469632d8f00298ed3f469102b8462 615 Gene3D G3DSA:3.30.9.10 178 280 1.7E-10 T 09-03-2017 NA29_RS03545 1cd469632d8f00298ed3f469102b8462 615 Pfam PF01494 FAD binding domain 16 351 8.9E-81 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 NA29_RS03545 1cd469632d8f00298ed3f469102b8462 615 Hamap MF_01652 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase [mhpA]. 6 613 63.627 T 09-03-2017 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase GO:0008688|GO:0019622|GO:0055114 KEGG: 00360+1.14.13.127|KEGG: 00362+1.14.13.12|KEGG: 00627+1.14.13.12|MetaCyc: PWY-6690 NA29_RS24635 1aa2dd8c1cb53e1566e686b1fc403467 380 Gene3D G3DSA:3.40.50.2300 28 229 1.3E-63 T 09-03-2017 NA29_RS24635 1aa2dd8c1cb53e1566e686b1fc403467 380 SUPERFAMILY SSF53822 28 374 3.99E-90 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS24635 1aa2dd8c1cb53e1566e686b1fc403467 380 Pfam PF13458 Periplasmic binding protein 28 346 2.6E-55 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS24635 1aa2dd8c1cb53e1566e686b1fc403467 380 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 94 104 7.5E-5 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS24635 1aa2dd8c1cb53e1566e686b1fc403467 380 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 259 277 7.5E-5 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS24635 1aa2dd8c1cb53e1566e686b1fc403467 380 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 7.5E-5 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS06800 d3b6d248f2226a580e42288c8b7c021f 170 Pfam PF02600 Disulfide bond formation protein DsbB 13 159 3.6E-35 T 09-03-2017 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 NA29_RS06800 d3b6d248f2226a580e42288c8b7c021f 170 Gene3D G3DSA:1.20.1550.10 9 160 1.5E-46 T 09-03-2017 IPR023380 Disulphide bond formation protein DsbB-like domain NA29_RS06800 d3b6d248f2226a580e42288c8b7c021f 170 SUPERFAMILY SSF158442 16 160 3.01E-36 T 09-03-2017 NA29_RS06800 d3b6d248f2226a580e42288c8b7c021f 170 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 8 168 19.082 T 09-03-2017 IPR022920 Disulphide bond formation protein DsbB NA29_RS15485 8d7daea27ccc39a2a65407657ab42a50 396 Gene3D G3DSA:3.90.1150.10 272 387 4.1E-9 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS15485 8d7daea27ccc39a2a65407657ab42a50 396 SUPERFAMILY SSF53383 4 388 3.63E-108 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS15485 8d7daea27ccc39a2a65407657ab42a50 396 Gene3D G3DSA:3.40.640.10 57 271 1.4E-76 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS15485 8d7daea27ccc39a2a65407657ab42a50 396 Pfam PF00155 Aminotransferase class I and II 45 383 1.7E-34 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS21485 24d1830292cbf22273d295b0da0f4f23 302 Gene3D G3DSA:3.40.190.10 178 264 1.4E-19 T 09-03-2017 NA29_RS21485 24d1830292cbf22273d295b0da0f4f23 302 SUPERFAMILY SSF53850 91 297 2.33E-40 T 09-03-2017 NA29_RS21485 24d1830292cbf22273d295b0da0f4f23 302 SUPERFAMILY SSF46785 3 113 2.15E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21485 24d1830292cbf22273d295b0da0f4f23 302 Pfam PF03466 LysR substrate binding domain 90 292 2.4E-41 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS21485 24d1830292cbf22273d295b0da0f4f23 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.1E-22 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21485 24d1830292cbf22273d295b0da0f4f23 302 Gene3D G3DSA:3.40.190.10 93 177 1.1E-21 T 09-03-2017 NA29_RS21485 24d1830292cbf22273d295b0da0f4f23 302 Gene3D G3DSA:1.10.10.10 3 85 1.7E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21485 24d1830292cbf22273d295b0da0f4f23 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.3E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21485 24d1830292cbf22273d295b0da0f4f23 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.3E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21485 24d1830292cbf22273d295b0da0f4f23 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.3E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19625 d38396c9b9dde563e776d1a96a15bf80 740 Pfam PF12805 FUSC-like inner membrane protein yccS 70 347 4.0E-68 T 09-03-2017 IPR032692 Integral membrane protein YccS, N-terminal NA29_RS19625 d38396c9b9dde563e776d1a96a15bf80 740 Pfam PF13515 Fusaric acid resistance protein-like 423 540 5.6E-17 T 09-03-2017 NA29_RS01610 20e8292faaaa24fdfba1712a2204078c 232 Pfam PF00072 Response regulator receiver domain 3 112 1.0E-28 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS01610 20e8292faaaa24fdfba1712a2204078c 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 9.7E-16 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS01610 20e8292faaaa24fdfba1712a2204078c 232 SMART SM00862 145 218 6.1E-16 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS01610 20e8292faaaa24fdfba1712a2204078c 232 Gene3D G3DSA:3.40.50.2300 1 123 3.8E-42 T 09-03-2017 NA29_RS01610 20e8292faaaa24fdfba1712a2204078c 232 Gene3D G3DSA:1.10.10.10 124 220 2.5E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01610 20e8292faaaa24fdfba1712a2204078c 232 SMART SM00448 1 112 2.3E-42 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS01610 20e8292faaaa24fdfba1712a2204078c 232 SUPERFAMILY SSF52172 1 173 1.25E-40 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS22330 3100c2f3b208fdec45c40372e0b88a8a 377 Pfam PF00696 Amino acid kinase family 9 243 9.2E-40 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase NA29_RS22330 3100c2f3b208fdec45c40372e0b88a8a 377 Gene3D G3DSA:3.40.1160.10 4 266 4.2E-54 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase NA29_RS22330 3100c2f3b208fdec45c40372e0b88a8a 377 SMART SM00359 286 369 1.5E-14 T 09-03-2017 IPR002478 PUA domain GO:0003723 NA29_RS22330 3100c2f3b208fdec45c40372e0b88a8a 377 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 4.8E-47 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 NA29_RS22330 3100c2f3b208fdec45c40372e0b88a8a 377 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 4.8E-47 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 NA29_RS22330 3100c2f3b208fdec45c40372e0b88a8a 377 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 4.8E-47 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 NA29_RS22330 3100c2f3b208fdec45c40372e0b88a8a 377 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 4.8E-47 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 NA29_RS22330 3100c2f3b208fdec45c40372e0b88a8a 377 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 4.8E-47 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 NA29_RS22330 3100c2f3b208fdec45c40372e0b88a8a 377 SUPERFAMILY SSF88697 285 376 4.47E-23 T 09-03-2017 IPR015947 PUA-like domain NA29_RS22330 3100c2f3b208fdec45c40372e0b88a8a 377 Gene3D G3DSA:2.30.130.10 283 374 3.3E-28 T 09-03-2017 IPR015947 PUA-like domain NA29_RS22330 3100c2f3b208fdec45c40372e0b88a8a 377 SUPERFAMILY SSF53633 9 264 3.14E-65 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase NA29_RS22330 3100c2f3b208fdec45c40372e0b88a8a 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 375 5.6E-128 T 09-03-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 NA29_RS22330 3100c2f3b208fdec45c40372e0b88a8a 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 267 35.267 T 09-03-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 NA29_RS22330 3100c2f3b208fdec45c40372e0b88a8a 377 PIRSF PIRSF000729 4 377 2.0E-127 T 09-03-2017 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 NA29_RS22330 3100c2f3b208fdec45c40372e0b88a8a 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 09-03-2017 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 NA29_RS22330 3100c2f3b208fdec45c40372e0b88a8a 377 Pfam PF01472 PUA domain 286 360 1.3E-22 T 09-03-2017 IPR002478 PUA domain GO:0003723 NA29_RS17195 848dc6b810c2a6dd8c77cf87dd12c5ef 237 SUPERFAMILY SSF52172 3 128 7.97E-42 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS17195 848dc6b810c2a6dd8c77cf87dd12c5ef 237 Pfam PF00072 Response regulator receiver domain 5 114 4.4E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS17195 848dc6b810c2a6dd8c77cf87dd12c5ef 237 SMART SM00862 153 229 3.3E-23 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS17195 848dc6b810c2a6dd8c77cf87dd12c5ef 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 2.0E-21 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS17195 848dc6b810c2a6dd8c77cf87dd12c5ef 237 SMART SM00448 3 113 6.4E-42 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS17195 848dc6b810c2a6dd8c77cf87dd12c5ef 237 SUPERFAMILY SSF46894 126 230 7.37E-24 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS17195 848dc6b810c2a6dd8c77cf87dd12c5ef 237 Gene3D G3DSA:1.10.10.10 132 231 2.4E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17195 848dc6b810c2a6dd8c77cf87dd12c5ef 237 Gene3D G3DSA:3.40.50.2300 3 131 1.2E-42 T 09-03-2017 NA29_RS07500 f64a2daf354f96a40e4d638b1a1b3cb2 536 SUPERFAMILY SSF51338 15 110 4.71E-20 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS07500 f64a2daf354f96a40e4d638b1a1b3cb2 536 SUPERFAMILY SSF51338 456 482 4.71E-20 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS07500 f64a2daf354f96a40e4d638b1a1b3cb2 536 SUPERFAMILY SSF51556 367 457 2.69E-48 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS07500 f64a2daf354f96a40e4d638b1a1b3cb2 536 SUPERFAMILY SSF51556 109 270 2.69E-48 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS07500 f64a2daf354f96a40e4d638b1a1b3cb2 536 SUPERFAMILY SSF51556 314 338 2.69E-48 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS07500 f64a2daf354f96a40e4d638b1a1b3cb2 536 Gene3D G3DSA:2.30.40.10 440 519 8.9E-9 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS07500 f64a2daf354f96a40e4d638b1a1b3cb2 536 Pfam PF01979 Amidohydrolase family 394 479 3.7E-11 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS07500 f64a2daf354f96a40e4d638b1a1b3cb2 536 Pfam PF01979 Amidohydrolase family 106 245 1.2E-5 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS07500 f64a2daf354f96a40e4d638b1a1b3cb2 536 Gene3D G3DSA:3.20.20.140 313 439 6.0E-47 T 09-03-2017 NA29_RS07500 f64a2daf354f96a40e4d638b1a1b3cb2 536 Gene3D G3DSA:3.20.20.140 120 269 6.0E-47 T 09-03-2017 NA29_RS07500 f64a2daf354f96a40e4d638b1a1b3cb2 536 Gene3D G3DSA:2.30.40.10 45 119 4.9E-14 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS22265 c341bf8e299e0ae1395bb508f43fbdd4 380 PIRSF PIRSF000355 29 380 2.2E-133 T 09-03-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS22265 c341bf8e299e0ae1395bb508f43fbdd4 380 SUPERFAMILY SSF47240 44 351 4.26E-96 T 09-03-2017 IPR009078 Ferritin-like superfamily NA29_RS22265 c341bf8e299e0ae1395bb508f43fbdd4 380 Gene3D G3DSA:1.10.620.20 46 355 1.7E-111 T 09-03-2017 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 NA29_RS22265 c341bf8e299e0ae1395bb508f43fbdd4 380 Pfam PF00268 Ribonucleotide reductase, small chain 60 347 4.0E-83 T 09-03-2017 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS00180 410018e416006c9283a05c343082ecb8 152 Pfam PF01047 MarR family 43 100 7.0E-14 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS00180 410018e416006c9283a05c343082ecb8 152 Gene3D G3DSA:1.10.10.10 4 147 4.8E-39 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00180 410018e416006c9283a05c343082ecb8 152 SUPERFAMILY SSF46785 10 147 1.67E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00180 410018e416006c9283a05c343082ecb8 152 SMART SM00347 35 131 6.5E-21 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS00180 410018e416006c9283a05c343082ecb8 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 1.5E-7 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS00180 410018e416006c9283a05c343082ecb8 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 1.5E-7 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS00180 410018e416006c9283a05c343082ecb8 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 1.5E-7 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS18625 632802a8a6cc1afe83d154f35d567307 232 SUPERFAMILY SSF52540 14 226 3.28E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18625 632802a8a6cc1afe83d154f35d567307 232 SMART SM00382 38 225 2.0E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS18625 632802a8a6cc1afe83d154f35d567307 232 Pfam PF00005 ABC transporter 29 175 5.9E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS18625 632802a8a6cc1afe83d154f35d567307 232 Gene3D G3DSA:3.40.50.300 8 227 7.3E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18625 632802a8a6cc1afe83d154f35d567307 232 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS13120 d6222b8e257bdb67b010f1ef19b076d7 527 Pfam PF02540 NAD synthase 210 249 6.6E-7 T 09-03-2017 IPR022310 NAD/GMP synthase NA29_RS13120 d6222b8e257bdb67b010f1ef19b076d7 527 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 199 4.3E-68 T 09-03-2017 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 NA29_RS13120 d6222b8e257bdb67b010f1ef19b076d7 527 SUPERFAMILY SSF54810 400 527 1.06E-46 T 09-03-2017 NA29_RS13120 d6222b8e257bdb67b010f1ef19b076d7 527 Gene3D G3DSA:3.40.50.880 2 218 2.6E-55 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS13120 d6222b8e257bdb67b010f1ef19b076d7 527 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 527 1.4E-145 T 09-03-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 NA29_RS13120 d6222b8e257bdb67b010f1ef19b076d7 527 SUPERFAMILY SSF52402 192 415 4.19E-59 T 09-03-2017 NA29_RS13120 d6222b8e257bdb67b010f1ef19b076d7 527 Pfam PF00117 Glutamine amidotransferase class-I 7 195 3.5E-31 T 09-03-2017 IPR017926 Glutamine amidotransferase NA29_RS13120 d6222b8e257bdb67b010f1ef19b076d7 527 SUPERFAMILY SSF52317 1 232 2.75E-53 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS13120 d6222b8e257bdb67b010f1ef19b076d7 527 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 527 54.178 T 09-03-2017 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 NA29_RS13120 d6222b8e257bdb67b010f1ef19b076d7 527 Gene3D G3DSA:3.40.50.620 219 394 7.1E-57 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS13120 d6222b8e257bdb67b010f1ef19b076d7 527 Gene3D G3DSA:3.30.300.10 396 527 5.3E-52 T 09-03-2017 NA29_RS13120 d6222b8e257bdb67b010f1ef19b076d7 527 Pfam PF00958 GMP synthase C terminal domain 441 526 1.9E-41 T 09-03-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 NA29_RS24575 49906171462ddcdeea83fde76bb5f6f2 415 SUPERFAMILY SSF53474 2 232 3.49E-43 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS24575 49906171462ddcdeea83fde76bb5f6f2 415 Gene3D G3DSA:3.40.50.1820 6 234 2.0E-45 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS24575 49906171462ddcdeea83fde76bb5f6f2 415 Gene3D G3DSA:3.10.450.50 261 382 1.1E-14 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS24575 49906171462ddcdeea83fde76bb5f6f2 415 Pfam PF01738 Dienelactone hydrolase family 16 232 3.6E-42 T 09-03-2017 IPR002925 Dienelactone hydrolase GO:0016787 NA29_RS24575 49906171462ddcdeea83fde76bb5f6f2 415 SUPERFAMILY SSF54427 256 384 1.18E-22 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS06145 9ba8f4c57ebc5326b0f12fc10f0a4875 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS06145 9ba8f4c57ebc5326b0f12fc10f0a4875 482 SUPERFAMILY SSF53720 6 481 2.75E-174 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS06145 9ba8f4c57ebc5326b0f12fc10f0a4875 482 Pfam PF00171 Aldehyde dehydrogenase family 19 477 1.3E-172 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS06145 9ba8f4c57ebc5326b0f12fc10f0a4875 482 Gene3D G3DSA:3.40.309.10 269 453 2.0E-67 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS06145 9ba8f4c57ebc5326b0f12fc10f0a4875 482 Gene3D G3DSA:3.40.605.10 11 268 5.3E-106 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS06145 9ba8f4c57ebc5326b0f12fc10f0a4875 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 2.7E-215 T 09-03-2017 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 NA29_RS06145 9ba8f4c57ebc5326b0f12fc10f0a4875 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS10295 e998508ca0b31b7f1d506946f9986d68 84 Gene3D G3DSA:3.30.1070.10 36 83 4.6E-19 T 09-03-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 NA29_RS10295 e998508ca0b31b7f1d506946f9986d68 84 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 82 9.0E-29 T 09-03-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 NA29_RS10295 e998508ca0b31b7f1d506946f9986d68 84 SUPERFAMILY SSF55229 35 83 6.8E-14 T 09-03-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 NA29_RS10295 e998508ca0b31b7f1d506946f9986d68 84 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 4.0E-25 T 09-03-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 NA29_RS10295 e998508ca0b31b7f1d506946f9986d68 84 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 17.844 T 09-03-2017 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 NA29_RS04050 467f3968f435bc79e5b442de841dc3d6 224 Pfam PF00072 Response regulator receiver domain 3 112 1.6E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS04050 467f3968f435bc79e5b442de841dc3d6 224 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 218 1.8E-97 T 09-03-2017 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 NA29_RS04050 467f3968f435bc79e5b442de841dc3d6 224 SUPERFAMILY SSF52172 1 169 2.11E-40 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS04050 467f3968f435bc79e5b442de841dc3d6 224 SMART SM00448 1 111 6.6E-44 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS04050 467f3968f435bc79e5b442de841dc3d6 224 Gene3D G3DSA:1.10.10.10 123 221 4.0E-33 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04050 467f3968f435bc79e5b442de841dc3d6 224 Gene3D G3DSA:3.40.50.2300 1 122 4.2E-39 T 09-03-2017 NA29_RS04050 467f3968f435bc79e5b442de841dc3d6 224 SMART SM00862 145 220 4.6E-25 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS04050 467f3968f435bc79e5b442de841dc3d6 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 6.4E-26 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS15320 2080cea5add5f9782575ccd1b636723e 113 Gene3D G3DSA:3.10.20.30 7 105 5.2E-32 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS15320 2080cea5add5f9782575ccd1b636723e 113 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 91 1.1E-12 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS15320 2080cea5add5f9782575ccd1b636723e 113 PRINTS PR00355 Adrenodoxin signature 60 74 4.8E-10 T 09-03-2017 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 NA29_RS15320 2080cea5add5f9782575ccd1b636723e 113 PRINTS PR00355 Adrenodoxin signature 83 91 4.8E-10 T 09-03-2017 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 NA29_RS15320 2080cea5add5f9782575ccd1b636723e 113 PRINTS PR00355 Adrenodoxin signature 42 52 4.8E-10 T 09-03-2017 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 NA29_RS15320 2080cea5add5f9782575ccd1b636723e 113 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 112 7.7E-55 T 09-03-2017 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 NA29_RS15320 2080cea5add5f9782575ccd1b636723e 113 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 09-03-2017 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 NA29_RS15320 2080cea5add5f9782575ccd1b636723e 113 SUPERFAMILY SSF54292 4 109 3.85E-30 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS24130 1b22cbb0aa2dbeef91d9394650205599 159 Gene3D G3DSA:1.10.10.10 97 149 5.2E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS24130 1b22cbb0aa2dbeef91d9394650205599 159 SUPERFAMILY SSF88659 93 152 5.45E-14 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24130 1b22cbb0aa2dbeef91d9394650205599 159 Pfam PF08281 Sigma-70, region 4 100 148 9.6E-16 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24130 1b22cbb0aa2dbeef91d9394650205599 159 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 2 148 2.6E-18 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24130 1b22cbb0aa2dbeef91d9394650205599 159 SUPERFAMILY SSF88946 2 89 2.79E-13 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24130 1b22cbb0aa2dbeef91d9394650205599 159 Pfam PF04542 Sigma-70 region 2 4 69 1.6E-12 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24130 1b22cbb0aa2dbeef91d9394650205599 159 Gene3D G3DSA:1.10.1740.10 2 92 2.0E-10 T 09-03-2017 NA29_RS22755 bfe4c50390d9419ad3077f71e242e8f1 218 Gene3D G3DSA:1.10.10.10 4 73 3.8E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS22755 bfe4c50390d9419ad3077f71e242e8f1 218 Pfam PF07729 FCD domain 82 201 1.9E-20 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS22755 bfe4c50390d9419ad3077f71e242e8f1 218 SUPERFAMILY SSF46785 5 76 2.12E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS22755 bfe4c50390d9419ad3077f71e242e8f1 218 SUPERFAMILY SSF48008 78 210 1.78E-19 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS22755 bfe4c50390d9419ad3077f71e242e8f1 218 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 72 1.9E-19 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS22755 bfe4c50390d9419ad3077f71e242e8f1 218 Gene3D G3DSA:1.20.120.530 75 214 1.8E-31 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS22755 bfe4c50390d9419ad3077f71e242e8f1 218 SMART SM00345 14 72 1.7E-16 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS22755 bfe4c50390d9419ad3077f71e242e8f1 218 SMART SM00895 82 203 5.3E-11 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS15910 b15f3ed7b77589b42e43a21e3a77e058 232 Gene3D G3DSA:1.20.144.10 76 224 2.4E-19 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NA29_RS15910 b15f3ed7b77589b42e43a21e3a77e058 232 SUPERFAMILY SSF48317 16 230 1.96E-22 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NA29_RS15910 b15f3ed7b77589b42e43a21e3a77e058 232 Pfam PF01569 PAP2 superfamily 101 222 7.6E-14 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NA29_RS15910 b15f3ed7b77589b42e43a21e3a77e058 232 SMART SM00014 99 220 1.7E-7 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NA29_RS18130 a0ab78b3d72275fb7bb5a501ae464f9d 362 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 166 190 9.8E-10 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS18130 a0ab78b3d72275fb7bb5a501ae464f9d 362 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 11 33 9.8E-10 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS18130 a0ab78b3d72275fb7bb5a501ae464f9d 362 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 135 9.8E-10 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS18130 a0ab78b3d72275fb7bb5a501ae464f9d 362 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 279 295 5.3E-6 T 09-03-2017 NA29_RS18130 a0ab78b3d72275fb7bb5a501ae464f9d 362 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 5.3E-6 T 09-03-2017 NA29_RS18130 a0ab78b3d72275fb7bb5a501ae464f9d 362 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 5.3E-6 T 09-03-2017 NA29_RS18130 a0ab78b3d72275fb7bb5a501ae464f9d 362 SUPERFAMILY SSF51905 8 209 1.21E-37 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18130 a0ab78b3d72275fb7bb5a501ae464f9d 362 Gene3D G3DSA:3.50.50.60 247 278 9.7E-6 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18130 a0ab78b3d72275fb7bb5a501ae464f9d 362 Gene3D G3DSA:3.50.50.60 175 215 9.7E-6 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18130 a0ab78b3d72275fb7bb5a501ae464f9d 362 Gene3D G3DSA:3.50.50.60 3 174 4.4E-40 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18130 a0ab78b3d72275fb7bb5a501ae464f9d 362 SUPERFAMILY SSF51905 170 355 5.83E-9 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18130 a0ab78b3d72275fb7bb5a501ae464f9d 362 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 13 189 5.9E-23 T 09-03-2017 NA29_RS18130 a0ab78b3d72275fb7bb5a501ae464f9d 362 Gene3D G3DSA:3.50.50.60 279 355 1.4E-9 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03410 7ad8c50f6aa28250ed52b160a4343357 575 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 182 514 6.8E-33 T 09-03-2017 IPR005565 Haemolysin activator HlyB NA29_RS03410 7ad8c50f6aa28250ed52b160a4343357 575 Pfam PF08479 POTRA domain, ShlB-type 105 162 2.7E-16 T 09-03-2017 IPR013686 Polypeptide-transport-associated, ShlB-type NA29_RS03410 7ad8c50f6aa28250ed52b160a4343357 575 Gene3D G3DSA:3.10.20.310 67 162 1.7E-23 T 09-03-2017 NA29_RS03410 7ad8c50f6aa28250ed52b160a4343357 575 PIRSF PIRSF029745 2 575 4.8E-137 T 09-03-2017 IPR027282 Two partner secretion pathway transporter GO:0015031 NA29_RS03410 7ad8c50f6aa28250ed52b160a4343357 575 Gene3D G3DSA:2.40.160.50 192 575 2.8E-117 T 09-03-2017 NA29_RS01655 6cde1b7f1c0b7dbd6d51b3a0bd3bcdb2 260 Gene3D G3DSA:3.30.420.40 13 39 5.5E-4 T 09-03-2017 NA29_RS01655 6cde1b7f1c0b7dbd6d51b3a0bd3bcdb2 260 Gene3D G3DSA:3.30.420.40 143 189 5.5E-4 T 09-03-2017 NA29_RS01655 6cde1b7f1c0b7dbd6d51b3a0bd3bcdb2 260 Pfam PF14023 Protein of unknown function (DUF4239) 64 248 6.2E-10 T 09-03-2017 IPR025333 Protein of unknown function DUF4239 NA29_RS05955 52c9f49fb354507bf2990301d0d6f92e 323 ProSitePatterns PS00018 EF-hand calcium-binding domain. 310 322 - T 09-03-2017 IPR018247 EF-Hand 1, calcium-binding site NA29_RS05955 52c9f49fb354507bf2990301d0d6f92e 323 SUPERFAMILY SSF53850 95 295 2.9E-44 T 09-03-2017 NA29_RS05955 52c9f49fb354507bf2990301d0d6f92e 323 Pfam PF03466 LysR substrate binding domain 95 294 4.8E-44 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS05955 52c9f49fb354507bf2990301d0d6f92e 323 Gene3D G3DSA:1.10.10.10 6 88 4.6E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05955 52c9f49fb354507bf2990301d0d6f92e 323 SUPERFAMILY SSF46785 5 115 1.24E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05955 52c9f49fb354507bf2990301d0d6f92e 323 Gene3D G3DSA:3.40.190.10 180 266 1.9E-22 T 09-03-2017 NA29_RS05955 52c9f49fb354507bf2990301d0d6f92e 323 Gene3D G3DSA:3.40.190.10 94 179 1.3E-24 T 09-03-2017 NA29_RS05955 52c9f49fb354507bf2990301d0d6f92e 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.0E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS05955 52c9f49fb354507bf2990301d0d6f92e 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.8E-11 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS05955 52c9f49fb354507bf2990301d0d6f92e 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.8E-11 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS05955 52c9f49fb354507bf2990301d0d6f92e 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.8E-11 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06810 2c7262f98d5a21cd958bddeaf1eec18e 219 Gene3D G3DSA:1.20.120.530 80 218 2.4E-34 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS06810 2c7262f98d5a21cd958bddeaf1eec18e 219 SUPERFAMILY SSF48008 82 218 9.68E-32 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS06810 2c7262f98d5a21cd958bddeaf1eec18e 219 SUPERFAMILY SSF46785 9 80 6.92E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06810 2c7262f98d5a21cd958bddeaf1eec18e 219 Pfam PF07729 FCD domain 86 209 1.1E-29 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS06810 2c7262f98d5a21cd958bddeaf1eec18e 219 SMART SM00895 86 210 5.2E-23 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS06810 2c7262f98d5a21cd958bddeaf1eec18e 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.8E-15 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS06810 2c7262f98d5a21cd958bddeaf1eec18e 219 SMART SM00345 18 76 1.3E-14 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS06810 2c7262f98d5a21cd958bddeaf1eec18e 219 Gene3D G3DSA:1.10.10.10 8 78 3.8E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14795 1623d30d2e88a04d7681181434ca8c3f 1024 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 213 285 2.1E-15 T 09-03-2017 IPR020012 Motility protein FimV, N-terminal NA29_RS14795 1623d30d2e88a04d7681181434ca8c3f 1024 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 979 1022 1.8E-13 T 09-03-2017 IPR020011 Motility protein FimV, C-terminal NA29_RS15210 99ded1fb5507c238350965c5d0c3eb44 284 SUPERFAMILY SSF51569 2 276 2.47E-99 T 09-03-2017 NA29_RS15210 99ded1fb5507c238350965c5d0c3eb44 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 274 6.2E-119 T 09-03-2017 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 NA29_RS15210 99ded1fb5507c238350965c5d0c3eb44 284 Gene3D G3DSA:3.20.20.70 11 277 4.0E-111 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS15210 99ded1fb5507c238350965c5d0c3eb44 284 Pfam PF00793 DAHP synthetase I family 8 274 2.4E-62 T 09-03-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 NA29_RS15210 99ded1fb5507c238350965c5d0c3eb44 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 276 51.661 T 09-03-2017 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 NA29_RS02665 919f8253adb6588fc7f85ba771266c49 267 Gene3D G3DSA:3.40.190.10 150 210 1.1E-9 T 09-03-2017 NA29_RS02665 919f8253adb6588fc7f85ba771266c49 267 SMART SM00062 42 262 1.2E-34 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS02665 919f8253adb6588fc7f85ba771266c49 267 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 NA29_RS02665 919f8253adb6588fc7f85ba771266c49 267 SUPERFAMILY SSF53850 14 260 1.68E-48 T 09-03-2017 NA29_RS02665 919f8253adb6588fc7f85ba771266c49 267 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 260 4.6E-44 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS02665 919f8253adb6588fc7f85ba771266c49 267 Gene3D G3DSA:3.40.190.10 24 149 2.2E-34 T 09-03-2017 NA29_RS08915 0a19ad4ef4eec83cc761d9b49c355c6d 186 Pfam PF03449 Transcription elongation factor, N-terminal 30 100 2.1E-24 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 NA29_RS08915 0a19ad4ef4eec83cc761d9b49c355c6d 186 PIRSF PIRSF006092 26 184 7.5E-42 T 09-03-2017 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 NA29_RS08915 0a19ad4ef4eec83cc761d9b49c355c6d 186 SUPERFAMILY SSF54534 110 182 6.28E-18 T 09-03-2017 NA29_RS08915 0a19ad4ef4eec83cc761d9b49c355c6d 186 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 110 182 3.8E-21 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 NA29_RS08915 0a19ad4ef4eec83cc761d9b49c355c6d 186 Hamap MF_00930 Transcription elongation factor GreB [greB]. 27 183 49.8 T 09-03-2017 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 NA29_RS08915 0a19ad4ef4eec83cc761d9b49c355c6d 186 SUPERFAMILY SSF46557 29 103 1.18E-25 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 NA29_RS08915 0a19ad4ef4eec83cc761d9b49c355c6d 186 Gene3D G3DSA:1.10.287.180 29 101 3.3E-23 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 NA29_RS08915 0a19ad4ef4eec83cc761d9b49c355c6d 186 Hamap MF_00105 Transcription elongation factor GreA [greA]. 28 181 25.746 T 09-03-2017 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 NA29_RS08915 0a19ad4ef4eec83cc761d9b49c355c6d 186 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 29 183 6.4E-66 T 09-03-2017 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 NA29_RS08915 0a19ad4ef4eec83cc761d9b49c355c6d 186 Gene3D G3DSA:3.10.50.30 106 184 8.9E-24 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 NA29_RS20935 9c212314e012fd5babcb65ad3c342378 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 4.8E-35 T 09-03-2017 IPR014031 Beta-ketoacyl synthase, C-terminal NA29_RS20935 9c212314e012fd5babcb65ad3c342378 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 2.4E-61 T 09-03-2017 IPR014030 Beta-ketoacyl synthase, N-terminal NA29_RS20935 9c212314e012fd5babcb65ad3c342378 412 Gene3D G3DSA:3.40.47.10 3 257 1.3E-82 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS20935 9c212314e012fd5babcb65ad3c342378 412 SUPERFAMILY SSF53901 214 411 1.08E-68 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS20935 9c212314e012fd5babcb65ad3c342378 412 Gene3D G3DSA:3.40.47.10 263 411 3.0E-59 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS20935 9c212314e012fd5babcb65ad3c342378 412 SMART SM00825 Beta-ketoacyl synthase 6 412 6.5E-17 T 09-03-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain NA29_RS20935 9c212314e012fd5babcb65ad3c342378 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 6.7E-200 T 09-03-2017 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 NA29_RS20935 9c212314e012fd5babcb65ad3c342378 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 09-03-2017 IPR018201 Beta-ketoacyl synthase, active site NA29_RS20935 9c212314e012fd5babcb65ad3c342378 412 SUPERFAMILY SSF53901 4 252 5.26E-82 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS20935 9c212314e012fd5babcb65ad3c342378 412 PIRSF PIRSF000447 1 412 7.9E-191 T 09-03-2017 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 NA29_RS05535 e43f3f88d1611920793c39b058c0294a 345 SUPERFAMILY SSF53474 34 339 4.5E-33 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS05535 e43f3f88d1611920793c39b058c0294a 345 Pfam PF00561 alpha/beta hydrolase fold 78 319 2.3E-9 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS05535 e43f3f88d1611920793c39b058c0294a 345 Gene3D G3DSA:3.40.50.1820 77 192 3.3E-24 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS05535 e43f3f88d1611920793c39b058c0294a 345 Gene3D G3DSA:3.40.50.1820 266 296 3.3E-24 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS05535 e43f3f88d1611920793c39b058c0294a 345 PIRSF PIRSF005211 3 344 4.4E-107 T 09-03-2017 IPR012020 AB hydrolase 4 family NA29_RS05535 e43f3f88d1611920793c39b058c0294a 345 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 243 284 - T 09-03-2017 IPR000952 AB hydrolase 4, conserved site NA29_RS16605 a81ff09c278a308dc06f3a4ddd643e92 377 SUPERFAMILY SSF56266 17 364 2.14E-86 T 09-03-2017 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 NA29_RS16605 a81ff09c278a308dc06f3a4ddd643e92 377 Gene3D G3DSA:3.60.70.12 14 369 1.9E-114 T 09-03-2017 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 NA29_RS16605 a81ff09c278a308dc06f3a4ddd643e92 377 Pfam PF03576 Peptidase family S58 25 363 5.1E-98 T 09-03-2017 IPR005321 Peptidase S58, DmpA NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 SUPERFAMILY SSF56014 148 346 2.49E-56 T 09-03-2017 NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 SUPERFAMILY SSF55124 14 147 4.91E-33 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 574 56.228 T 09-03-2017 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 176 332 4.3E-47 T 09-03-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 433 519 0.1 T 09-03-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 562 2.7E-246 T 09-03-2017 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 Gene3D G3DSA:3.90.480.10 74 145 5.2E-59 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 Gene3D G3DSA:3.90.480.10 344 423 5.2E-59 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 PRINTS PR00397 Sirohaem Fe-binding site signature 433 451 7.5E-10 T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 PRINTS PR00397 Sirohaem Fe-binding site signature 481 499 7.5E-10 T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 SUPERFAMILY SSF55124 348 423 6.21E-21 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 SUPERFAMILY SSF56014 432 567 7.59E-34 T 09-03-2017 NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 481 497 - T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 Gene3D G3DSA:3.30.413.10 432 569 1.8E-33 T 09-03-2017 NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 Gene3D G3DSA:3.30.413.10 148 341 2.1E-68 T 09-03-2017 NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 77 138 7.3E-17 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09740 4e5bd7788f6d72961b5d26ac7cff7e0f 580 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 355 420 1.1E-13 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 Gene3D G3DSA:3.30.413.10 632 766 1.2E-34 T 09-03-2017 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 792 2.5E-278 T 09-03-2017 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 SUPERFAMILY SSF51905 1 306 2.07E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 1.6E-6 T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 1.6E-6 T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 PIRSF PIRSF037149 1 826 0.0 T 09-03-2017 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 470 1.3E-11 T 09-03-2017 IPR007419 BFD-like [2Fe-2S]-binding domain NA29_RS19170 08232f5f823559256e73d91a338668b4 827 Pfam PF04324 BFD-like [2Fe-2S] binding domain 487 536 7.3E-13 T 09-03-2017 IPR007419 BFD-like [2Fe-2S]-binding domain NA29_RS19170 08232f5f823559256e73d91a338668b4 827 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 09-03-2017 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.1E-20 T 09-03-2017 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.1E-20 T 09-03-2017 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.1E-20 T 09-03-2017 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 1.1E-20 T 09-03-2017 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.1E-20 T 09-03-2017 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 Gene3D G3DSA:3.50.50.60 105 306 6.0E-49 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 Gene3D G3DSA:3.50.50.60 1 104 3.7E-27 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 1.8E-12 T 09-03-2017 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.8E-12 T 09-03-2017 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.8E-12 T 09-03-2017 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.8E-12 T 09-03-2017 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 766 2.6E-24 T 09-03-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 SUPERFAMILY SSF55124 508 628 1.23E-21 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 SUPERFAMILY SSF56014 633 800 3.14E-48 T 09-03-2017 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 281 3.7E-57 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS19170 08232f5f823559256e73d91a338668b4 827 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 562 623 1.2E-11 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS11430 e8bccab5b5562b0def59d8e9f7aee948 320 Gene3D G3DSA:3.40.800.10 12 320 5.9E-94 T 09-03-2017 IPR023696 Ureohydrolase domain NA29_RS11430 e8bccab5b5562b0def59d8e9f7aee948 320 ProSitePatterns PS01053 Arginase family signature. 250 271 - T 09-03-2017 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 NA29_RS11430 e8bccab5b5562b0def59d8e9f7aee948 320 SUPERFAMILY SSF52768 14 320 1.44E-77 T 09-03-2017 NA29_RS11430 e8bccab5b5562b0def59d8e9f7aee948 320 TIGRFAM TIGR01227 hutG: formimidoylglutamase 15 316 5.7E-93 T 09-03-2017 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 NA29_RS11430 e8bccab5b5562b0def59d8e9f7aee948 320 Pfam PF00491 Arginase family 50 319 8.5E-58 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 NA29_RS11430 e8bccab5b5562b0def59d8e9f7aee948 320 PRINTS PR00116 Arginase signature 128 143 7.6E-5 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 NA29_RS11430 e8bccab5b5562b0def59d8e9f7aee948 320 PRINTS PR00116 Arginase signature 282 296 7.6E-5 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 NA29_RS11430 e8bccab5b5562b0def59d8e9f7aee948 320 PRINTS PR00116 Arginase signature 247 276 7.6E-5 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 NA29_RS11430 e8bccab5b5562b0def59d8e9f7aee948 320 Hamap MF_00737 Formimidoylglutamase [hutG]. 10 320 40.0 T 09-03-2017 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 NA29_RS04730 6a7efa07b2ab72ea440e6bd21462b445 93 Pfam PF08988 Type III secretion system, cytoplasmic E component of needle 5 71 6.6E-16 T 09-03-2017 IPR012671 Type III secretion system, secretion protein E GO:0009405 NA29_RS04730 6a7efa07b2ab72ea440e6bd21462b445 93 TIGRFAM TIGR02501 type_III_yscE: type III secretion system protein, YseE family 5 71 3.6E-12 T 09-03-2017 IPR012671 Type III secretion system, secretion protein E GO:0009405 NA29_RS10540 06eb37957f8600bb79125b6509624c00 94 PRINTS PR00112 Acylphosphatase signature 25 50 5.7E-8 T 09-03-2017 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NA29_RS10540 06eb37957f8600bb79125b6509624c00 94 PRINTS PR00112 Acylphosphatase signature 4 19 5.7E-8 T 09-03-2017 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NA29_RS10540 06eb37957f8600bb79125b6509624c00 94 Gene3D G3DSA:3.30.70.100 4 89 2.7E-26 T 09-03-2017 NA29_RS10540 06eb37957f8600bb79125b6509624c00 94 ProSitePatterns PS00151 Acylphosphatase signature 2. 33 49 - T 09-03-2017 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NA29_RS10540 06eb37957f8600bb79125b6509624c00 94 SUPERFAMILY SSF54975 2 90 5.89E-25 T 09-03-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NA29_RS10540 06eb37957f8600bb79125b6509624c00 94 Pfam PF00708 Acylphosphatase 1 89 2.6E-23 T 09-03-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NA29_RS17415 2e0bad65d3bf89fcc62a79c60b0dc90a 502 Pfam PF00501 AMP-binding enzyme 8 409 3.8E-90 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS17415 2e0bad65d3bf89fcc62a79c60b0dc90a 502 Pfam PF13193 AMP-binding enzyme C-terminal domain 418 493 3.5E-17 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS17415 2e0bad65d3bf89fcc62a79c60b0dc90a 502 PRINTS PR00154 AMP-binding signature 161 169 6.9E-5 T 09-03-2017 IPR020459 AMP-binding NA29_RS17415 2e0bad65d3bf89fcc62a79c60b0dc90a 502 PRINTS PR00154 AMP-binding signature 149 160 6.9E-5 T 09-03-2017 IPR020459 AMP-binding NA29_RS17415 2e0bad65d3bf89fcc62a79c60b0dc90a 502 SUPERFAMILY SSF56801 2 501 9.81E-131 T 09-03-2017 NA29_RS17415 2e0bad65d3bf89fcc62a79c60b0dc90a 502 Gene3D G3DSA:3.40.50.980 2 160 1.1E-35 T 09-03-2017 NA29_RS17415 2e0bad65d3bf89fcc62a79c60b0dc90a 502 Gene3D G3DSA:2.30.38.10 328 399 4.3E-27 T 09-03-2017 NA29_RS17415 2e0bad65d3bf89fcc62a79c60b0dc90a 502 Gene3D G3DSA:3.40.50.980 161 313 1.7E-27 T 09-03-2017 NA29_RS17415 2e0bad65d3bf89fcc62a79c60b0dc90a 502 Gene3D G3DSA:3.30.300.30 404 501 8.3E-30 T 09-03-2017 NA29_RS17415 2e0bad65d3bf89fcc62a79c60b0dc90a 502 ProSitePatterns PS00455 Putative AMP-binding domain signature. 154 165 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS18470 e388fa82c154b8befb52512ec935899e 171 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 10 151 28.177 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS18470 e388fa82c154b8befb52512ec935899e 171 SUPERFAMILY SSF52121 6 151 9.94E-54 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS18470 e388fa82c154b8befb52512ec935899e 171 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 147 2.7E-40 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS18470 e388fa82c154b8befb52512ec935899e 171 Gene3D G3DSA:3.40.50.960 7 151 4.6E-55 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS18470 e388fa82c154b8befb52512ec935899e 171 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 148 1.1E-48 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS07305 6714f6a107515ba8cf622bf9255452c3 298 SUPERFAMILY SSF161098 41 291 8.41E-33 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS07305 6714f6a107515ba8cf622bf9255452c3 298 Gene3D G3DSA:1.10.3720.10 83 295 3.3E-37 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS07305 6714f6a107515ba8cf622bf9255452c3 298 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 34 296 7.2E-83 T 09-03-2017 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 NA29_RS07305 6714f6a107515ba8cf622bf9255452c3 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 294 1.3E-27 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS17785 8a53b400e7e6ab0f3fedb7f51e69ba44 334 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 333 3.6E-133 T 09-03-2017 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 NA29_RS17785 8a53b400e7e6ab0f3fedb7f51e69ba44 334 SUPERFAMILY SSF51735 1 333 5.35E-57 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17785 8a53b400e7e6ab0f3fedb7f51e69ba44 334 Gene3D G3DSA:3.40.50.720 1 174 6.9E-24 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17785 8a53b400e7e6ab0f3fedb7f51e69ba44 334 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 245 3.2E-44 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NA29_RS17785 8a53b400e7e6ab0f3fedb7f51e69ba44 334 Gene3D G3DSA:3.90.25.10 175 314 2.2E-31 T 09-03-2017 NA29_RS17785 8a53b400e7e6ab0f3fedb7f51e69ba44 334 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 2 334 57.907 T 09-03-2017 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 NA29_RS23240 45d079d4913410de3d42fda88542399e 123 Pfam PF04965 Gene 25-like lysozyme 16 90 2.9E-15 T 09-03-2017 IPR007048 GpW/Gp25/anti-adapter protein IraD NA29_RS23240 45d079d4913410de3d42fda88542399e 123 SUPERFAMILY SSF160719 11 106 2.88E-26 T 09-03-2017 NA29_RS23240 45d079d4913410de3d42fda88542399e 123 Gene3D G3DSA:3.10.450.40 10 107 1.2E-29 T 09-03-2017 NA29_RS00455 a5a0696a5ad5cb07e0e8fe4cf1170132 472 SMART SM00345 10 69 2.4E-6 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS00455 a5a0696a5ad5cb07e0e8fe4cf1170132 472 Gene3D G3DSA:3.40.640.10 121 343 7.5E-57 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS00455 a5a0696a5ad5cb07e0e8fe4cf1170132 472 SUPERFAMILY SSF53383 78 433 1.32E-73 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS00455 a5a0696a5ad5cb07e0e8fe4cf1170132 472 SUPERFAMILY SSF46785 6 79 1.16E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00455 a5a0696a5ad5cb07e0e8fe4cf1170132 472 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 69 3.8E-8 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS00455 a5a0696a5ad5cb07e0e8fe4cf1170132 472 Pfam PF00155 Aminotransferase class I and II 97 440 1.1E-26 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS00455 a5a0696a5ad5cb07e0e8fe4cf1170132 472 Gene3D G3DSA:1.10.10.10 6 70 6.6E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18300 e262e62af18871a6b083bc4d915f3066 417 Gene3D G3DSA:3.30.420.40 303 393 1.4E-9 T 09-03-2017 NA29_RS18300 e262e62af18871a6b083bc4d915f3066 417 Gene3D G3DSA:3.30.420.40 185 235 1.4E-9 T 09-03-2017 NA29_RS18300 e262e62af18871a6b083bc4d915f3066 417 Gene3D G3DSA:3.30.420.40 101 184 5.0E-27 T 09-03-2017 NA29_RS18300 e262e62af18871a6b083bc4d915f3066 417 Gene3D G3DSA:3.30.420.40 4 67 5.0E-27 T 09-03-2017 NA29_RS18300 e262e62af18871a6b083bc4d915f3066 417 SUPERFAMILY SSF53067 3 172 1.36E-28 T 09-03-2017 NA29_RS18300 e262e62af18871a6b083bc4d915f3066 417 Pfam PF00012 Hsp70 protein 90 226 3.2E-8 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS18300 e262e62af18871a6b083bc4d915f3066 417 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 180 193 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 NA29_RS18300 e262e62af18871a6b083bc4d915f3066 417 SUPERFAMILY SSF53067 175 244 1.81E-25 T 09-03-2017 NA29_RS18300 e262e62af18871a6b083bc4d915f3066 417 SUPERFAMILY SSF53067 292 413 1.81E-25 T 09-03-2017 NA29_RS24695 206de00a74b509df15c22b1f39f4cd2b 1191 Pfam PF12951 Passenger-associated-transport-repeat 580 604 0.04 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS24695 206de00a74b509df15c22b1f39f4cd2b 1191 Pfam PF12951 Passenger-associated-transport-repeat 673 703 5.5E-8 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS24695 206de00a74b509df15c22b1f39f4cd2b 1191 Pfam PF12951 Passenger-associated-transport-repeat 487 512 1.5E-4 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS24695 206de00a74b509df15c22b1f39f4cd2b 1191 Pfam PF12951 Passenger-associated-transport-repeat 396 419 1.1E-6 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS24695 206de00a74b509df15c22b1f39f4cd2b 1191 Gene3D G3DSA:2.160.20.20 453 625 3.1E-5 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS24695 206de00a74b509df15c22b1f39f4cd2b 1191 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 673 704 2.4E-8 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS24695 206de00a74b509df15c22b1f39f4cd2b 1191 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 581 603 4.7E-7 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS24695 206de00a74b509df15c22b1f39f4cd2b 1191 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 394 419 7.5E-7 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS24695 206de00a74b509df15c22b1f39f4cd2b 1191 SMART SM00869 921 1180 1.1E-30 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS24695 206de00a74b509df15c22b1f39f4cd2b 1191 Gene3D G3DSA:2.40.128.130 922 1191 4.5E-42 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS24695 206de00a74b509df15c22b1f39f4cd2b 1191 SUPERFAMILY SSF51126 619 831 3.11E-14 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS24695 206de00a74b509df15c22b1f39f4cd2b 1191 SUPERFAMILY SSF103515 882 1191 4.45E-43 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS24695 206de00a74b509df15c22b1f39f4cd2b 1191 Pfam PF03797 Autotransporter beta-domain 922 1175 8.8E-42 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS19735 5845e0ae70fe2a354b4b5aec9b3866a9 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 1.6E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19735 5845e0ae70fe2a354b4b5aec9b3866a9 320 Gene3D G3DSA:3.40.190.10 212 279 2.3E-5 T 09-03-2017 NA29_RS19735 5845e0ae70fe2a354b4b5aec9b3866a9 320 SUPERFAMILY SSF53850 106 314 1.63E-19 T 09-03-2017 NA29_RS19735 5845e0ae70fe2a354b4b5aec9b3866a9 320 Gene3D G3DSA:3.40.190.10 105 211 8.7E-18 T 09-03-2017 NA29_RS19735 5845e0ae70fe2a354b4b5aec9b3866a9 320 SUPERFAMILY SSF46785 14 118 2.37E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19735 5845e0ae70fe2a354b4b5aec9b3866a9 320 Gene3D G3DSA:1.10.10.10 16 99 4.2E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19735 5845e0ae70fe2a354b4b5aec9b3866a9 320 Pfam PF03466 LysR substrate binding domain 103 312 4.5E-19 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS19735 5845e0ae70fe2a354b4b5aec9b3866a9 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 54 3.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19735 5845e0ae70fe2a354b4b5aec9b3866a9 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 54 65 3.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19735 5845e0ae70fe2a354b4b5aec9b3866a9 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 44 3.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 Gene3D G3DSA:2.40.30.10 300 360 1.3E-5 T 09-03-2017 NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 630 1.3E-133 T 09-03-2017 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 Gene3D G3DSA:3.40.50.300 3 151 2.8E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 Gene3D G3DSA:1.10.10.10 514 574 3.9E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 Gene3D G3DSA:2.40.30.10 181 299 1.1E-28 T 09-03-2017 NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 SUPERFAMILY SSF46785 513 574 3.26E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 Gene3D G3DSA:1.10.10.10 440 506 6.6E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 Pfam PF09107 Elongation factor SelB, winged helix 585 629 1.1E-18 T 09-03-2017 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 SUPERFAMILY SSF50447 179 269 9.15E-20 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 Pfam PF00009 Elongation factor Tu GTP binding domain 2 150 2.0E-28 T 09-03-2017 NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 SUPERFAMILY SSF52540 2 199 2.24E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 SUPERFAMILY SSF46785 440 510 2.72E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 Pfam PF09106 Elongation factor SelB, winged helix 450 505 4.3E-13 T 09-03-2017 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 SUPERFAMILY SSF46785 589 629 2.72E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 PRINTS PR00315 GTP-binding elongation factor signature 107 116 4.0E-6 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 PRINTS PR00315 GTP-binding elongation factor signature 54 64 4.0E-6 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 PRINTS PR00315 GTP-binding elongation factor signature 70 81 4.0E-6 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 PRINTS PR00315 GTP-binding elongation factor signature 2 15 4.0E-6 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 Gene3D G3DSA:1.10.10.10 578 631 8.0E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 Pfam PF03144 Elongation factor Tu domain 2 198 267 1.1E-8 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 SUPERFAMILY SSF50465 277 372 4.93E-21 T 09-03-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NA29_RS16290 d0d387cbcfced18cb2a65452cb191f2d 639 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site NA29_RS14860 1acdfbdd86c9810d25cd746a87f29a4c 327 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 326 55.321 T 09-03-2017 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 NA29_RS14860 1acdfbdd86c9810d25cd746a87f29a4c 327 Gene3D G3DSA:3.90.110.10 156 326 2.3E-69 T 09-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 NA29_RS14860 1acdfbdd86c9810d25cd746a87f29a4c 327 SUPERFAMILY SSF56327 158 326 2.62E-57 T 09-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 NA29_RS14860 1acdfbdd86c9810d25cd746a87f29a4c 327 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 153 1.7E-38 T 09-03-2017 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 NA29_RS14860 1acdfbdd86c9810d25cd746a87f29a4c 327 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 5 320 5.1E-144 T 09-03-2017 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 NA29_RS14860 1acdfbdd86c9810d25cd746a87f29a4c 327 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 158 320 1.4E-29 T 09-03-2017 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 NA29_RS14860 1acdfbdd86c9810d25cd746a87f29a4c 327 PIRSF PIRSF000102 2 325 7.4E-62 T 09-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 NA29_RS14860 1acdfbdd86c9810d25cd746a87f29a4c 327 Gene3D G3DSA:3.40.50.720 5 154 1.1E-58 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS14860 1acdfbdd86c9810d25cd746a87f29a4c 327 SUPERFAMILY SSF51735 5 156 6.17E-46 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS00895 a8d29fe697c20515c653f3f1739f1f89 549 SMART SM00862 27 101 5.8E-13 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS00895 a8d29fe697c20515c653f3f1739f1f89 549 SUPERFAMILY SSF46894 5 102 4.82E-16 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS00895 a8d29fe697c20515c653f3f1739f1f89 549 Pfam PF00486 Transcriptional regulatory protein, C terminal 28 101 1.2E-16 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS00895 a8d29fe697c20515c653f3f1739f1f89 549 SUPERFAMILY SSF48452 313 463 2.42E-12 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS00895 a8d29fe697c20515c653f3f1739f1f89 549 Gene3D G3DSA:1.25.40.10 294 474 5.9E-13 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS00895 a8d29fe697c20515c653f3f1739f1f89 549 Gene3D G3DSA:1.10.10.10 5 102 2.5E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06365 70a2bab68e28832b7f1046a3fc763e83 516 SUPERFAMILY SSF55785 242 341 1.73E-7 T 09-03-2017 IPR000014 PAS domain NA29_RS06365 70a2bab68e28832b7f1046a3fc763e83 516 Gene3D G3DSA:3.30.450.20 238 332 3.6E-7 T 09-03-2017 NA29_RS06365 70a2bab68e28832b7f1046a3fc763e83 516 Gene3D G3DSA:3.30.450.20 32 46 1.8E-5 T 09-03-2017 NA29_RS06365 70a2bab68e28832b7f1046a3fc763e83 516 Gene3D G3DSA:3.30.450.20 81 172 1.8E-5 T 09-03-2017 NA29_RS06365 70a2bab68e28832b7f1046a3fc763e83 516 Gene3D G3DSA:3.30.450.20 185 203 3.6E-7 T 09-03-2017 NA29_RS06365 70a2bab68e28832b7f1046a3fc763e83 516 Pfam PF13188 PAS domain 186 285 3.2E-6 T 09-03-2017 IPR000014 PAS domain NA29_RS06365 70a2bab68e28832b7f1046a3fc763e83 516 Pfam PF13188 PAS domain 31 125 0.023 T 09-03-2017 IPR000014 PAS domain NA29_RS06365 70a2bab68e28832b7f1046a3fc763e83 516 SUPERFAMILY SSF55785 80 180 2.93E-5 T 09-03-2017 IPR000014 PAS domain NA29_RS06365 70a2bab68e28832b7f1046a3fc763e83 516 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 493 1.1E-30 T 09-03-2017 IPR000160 GGDEF domain NA29_RS06365 70a2bab68e28832b7f1046a3fc763e83 516 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 341 492 1.9E-26 T 09-03-2017 IPR000160 GGDEF domain NA29_RS06365 70a2bab68e28832b7f1046a3fc763e83 516 Gene3D G3DSA:3.30.70.270 347 493 4.8E-34 T 09-03-2017 NA29_RS06365 70a2bab68e28832b7f1046a3fc763e83 516 SUPERFAMILY SSF55073 350 493 7.85E-31 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS06365 70a2bab68e28832b7f1046a3fc763e83 516 SMART SM00267 334 497 1.2E-32 T 09-03-2017 IPR000160 GGDEF domain NA29_RS08470 9fdd36f8a05f0dd1fe869115c20903c8 304 SUPERFAMILY SSF46785 8 89 1.46E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08470 9fdd36f8a05f0dd1fe869115c20903c8 304 Gene3D G3DSA:3.40.190.10 183 268 4.6E-18 T 09-03-2017 NA29_RS08470 9fdd36f8a05f0dd1fe869115c20903c8 304 Pfam PF03466 LysR substrate binding domain 97 297 2.6E-37 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS08470 9fdd36f8a05f0dd1fe869115c20903c8 304 Gene3D G3DSA:1.10.10.10 9 94 3.3E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08470 9fdd36f8a05f0dd1fe869115c20903c8 304 SUPERFAMILY SSF53850 98 300 4.34E-37 T 09-03-2017 NA29_RS08470 9fdd36f8a05f0dd1fe869115c20903c8 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 4.8E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08470 9fdd36f8a05f0dd1fe869115c20903c8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 4.9E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08470 9fdd36f8a05f0dd1fe869115c20903c8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 4.9E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08470 9fdd36f8a05f0dd1fe869115c20903c8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 4.9E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08470 9fdd36f8a05f0dd1fe869115c20903c8 304 Gene3D G3DSA:3.40.190.10 98 182 4.8E-18 T 09-03-2017 NA29_RS19270 19b08e18b1e5520f297c01922a4c60ef 486 Gene3D G3DSA:2.20.200.10 109 156 4.2E-19 T 09-03-2017 NA29_RS19270 19b08e18b1e5520f297c01922a4c60ef 486 Gene3D G3DSA:2.20.200.10 328 363 4.2E-19 T 09-03-2017 NA29_RS19270 19b08e18b1e5520f297c01922a4c60ef 486 Pfam PF02321 Outer membrane efflux protein 73 269 5.7E-25 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS19270 19b08e18b1e5520f297c01922a4c60ef 486 Pfam PF02321 Outer membrane efflux protein 295 476 4.0E-29 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS19270 19b08e18b1e5520f297c01922a4c60ef 486 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 19 478 1.0E-107 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NA29_RS19270 19b08e18b1e5520f297c01922a4c60ef 486 SUPERFAMILY SSF56954 1 39 1.31E-106 T 09-03-2017 NA29_RS19270 19b08e18b1e5520f297c01922a4c60ef 486 SUPERFAMILY SSF56954 64 480 1.31E-106 T 09-03-2017 NA29_RS19270 19b08e18b1e5520f297c01922a4c60ef 486 Gene3D G3DSA:1.20.1600.10 157 327 1.6E-91 T 09-03-2017 NA29_RS19270 19b08e18b1e5520f297c01922a4c60ef 486 Gene3D G3DSA:1.20.1600.10 365 479 1.6E-91 T 09-03-2017 NA29_RS19270 19b08e18b1e5520f297c01922a4c60ef 486 Gene3D G3DSA:1.20.1600.10 61 99 1.6E-91 T 09-03-2017 NA29_RS19000 ebcf568585a9b1173ed736a8e08fa2b6 288 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS19000 ebcf568585a9b1173ed736a8e08fa2b6 288 SMART SM00382 54 242 3.3E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS19000 ebcf568585a9b1173ed736a8e08fa2b6 288 SUPERFAMILY SSF52540 28 263 6.14E-79 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19000 ebcf568585a9b1173ed736a8e08fa2b6 288 Pfam PF00005 ABC transporter 45 193 2.1E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS19000 ebcf568585a9b1173ed736a8e08fa2b6 288 Gene3D G3DSA:3.40.50.300 28 265 1.3E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS04550 50790d1122e6107c21eb11c3264c39e8 121 Gene3D G3DSA:2.60.300.12 11 107 6.4E-34 T 09-03-2017 IPR000361 FeS cluster biogenesis NA29_RS04550 50790d1122e6107c21eb11c3264c39e8 121 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 102 119 - T 09-03-2017 IPR017870 FeS cluster insertion, C-terminal, conserved site NA29_RS04550 50790d1122e6107c21eb11c3264c39e8 121 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 18 121 4.4E-39 T 09-03-2017 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 NA29_RS04550 50790d1122e6107c21eb11c3264c39e8 121 Pfam PF01521 Iron-sulphur cluster biosynthesis 16 116 2.0E-21 T 09-03-2017 IPR000361 FeS cluster biogenesis NA29_RS04550 50790d1122e6107c21eb11c3264c39e8 121 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 121 37.052 T 09-03-2017 IPR023063 FeS cluster insertion protein ErpA GO:0016226 NA29_RS04550 50790d1122e6107c21eb11c3264c39e8 121 SUPERFAMILY SSF89360 14 107 1.44E-32 T 09-03-2017 IPR000361 FeS cluster biogenesis NA29_RS10900 e2f491f8be954a1a7d9bbaa948743548 272 Gene3D G3DSA:3.40.50.2300 9 140 5.1E-39 T 09-03-2017 NA29_RS10900 e2f491f8be954a1a7d9bbaa948743548 272 Gene3D G3DSA:1.10.10.10 164 266 3.3E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10900 e2f491f8be954a1a7d9bbaa948743548 272 Pfam PF00072 Response regulator receiver domain 11 119 5.1E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS10900 e2f491f8be954a1a7d9bbaa948743548 272 SUPERFAMILY SSF46894 166 266 9.35E-20 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS10900 e2f491f8be954a1a7d9bbaa948743548 272 SMART SM00862 187 263 5.0E-17 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS10900 e2f491f8be954a1a7d9bbaa948743548 272 SMART SM00448 8 118 1.1E-41 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS10900 e2f491f8be954a1a7d9bbaa948743548 272 SUPERFAMILY SSF52172 8 130 5.12E-40 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS10900 e2f491f8be954a1a7d9bbaa948743548 272 Pfam PF00486 Transcriptional regulatory protein, C terminal 188 263 6.2E-16 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 Gene3D G3DSA:2.40.30.10 308 400 9.6E-45 T 09-03-2017 NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 SUPERFAMILY SSF50447 207 309 3.12E-30 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 Gene3D G3DSA:2.40.30.10 214 306 8.1E-37 T 09-03-2017 NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 SUPERFAMILY SSF50465 312 402 4.56E-35 T 09-03-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 402 60.099 T 09-03-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 Pfam PF03143 Elongation factor Tu C-terminal domain 306 400 1.2E-31 T 09-03-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.9E-58 T 09-03-2017 NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.1E-25 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.1E-25 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.1E-25 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.1E-25 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.1E-25 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 Gene3D G3DSA:3.40.50.300 4 213 1.5E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 Pfam PF03144 Elongation factor Tu domain 2 227 301 2.2E-17 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 401 9.1E-225 T 09-03-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 SUPERFAMILY SSF52540 6 221 2.25E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24060 760bcbb9544245fbd46219c4daadd266 402 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 2.1E-15 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 Gene3D G3DSA:2.40.30.10 308 400 9.6E-45 T 09-03-2017 NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 SUPERFAMILY SSF50447 207 309 3.12E-30 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 Gene3D G3DSA:2.40.30.10 214 306 8.1E-37 T 09-03-2017 NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 SUPERFAMILY SSF50465 312 402 4.56E-35 T 09-03-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 402 60.099 T 09-03-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 Pfam PF03143 Elongation factor Tu C-terminal domain 306 400 1.2E-31 T 09-03-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.9E-58 T 09-03-2017 NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.1E-25 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.1E-25 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.1E-25 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.1E-25 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.1E-25 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 Gene3D G3DSA:3.40.50.300 4 213 1.5E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 Pfam PF03144 Elongation factor Tu domain 2 227 301 2.2E-17 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 401 9.1E-225 T 09-03-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 SUPERFAMILY SSF52540 6 221 2.25E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23880 760bcbb9544245fbd46219c4daadd266 402 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 2.1E-15 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 NA29_RS11015 58511e92b5f66027329f882f3b9ec8a6 261 SMART SM00346 2 90 2.9E-13 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS11015 58511e92b5f66027329f882f3b9ec8a6 261 Pfam PF01614 Bacterial transcriptional regulator 124 244 6.4E-13 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS11015 58511e92b5f66027329f882f3b9ec8a6 261 Gene3D G3DSA:1.10.10.10 2 71 1.8E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11015 58511e92b5f66027329f882f3b9ec8a6 261 Pfam PF09339 IclR helix-turn-helix domain 2 51 2.3E-14 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS11015 58511e92b5f66027329f882f3b9ec8a6 261 SUPERFAMILY SSF55781 72 245 2.83E-29 T 09-03-2017 IPR029016 GAF domain-like NA29_RS11015 58511e92b5f66027329f882f3b9ec8a6 261 Gene3D G3DSA:3.30.450.40 76 245 1.4E-33 T 09-03-2017 IPR029016 GAF domain-like NA29_RS11015 58511e92b5f66027329f882f3b9ec8a6 261 SUPERFAMILY SSF46785 2 71 1.23E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS02650 eb250b2287998d2d77d9c911e0b0fa38 305 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS02650 eb250b2287998d2d77d9c911e0b0fa38 305 TIGRFAM TIGR01288 nodI: nodulation ABC transporter NodI 3 304 3.9E-135 T 09-03-2017 IPR005978 Nodulation ABC transporter, NodI GO:0005215|GO:0005524|GO:0006810|GO:0009877|GO:0016020 NA29_RS02650 eb250b2287998d2d77d9c911e0b0fa38 305 SUPERFAMILY SSF52540 4 226 9.16E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02650 eb250b2287998d2d77d9c911e0b0fa38 305 Pfam PF00005 ABC transporter 22 164 7.0E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS02650 eb250b2287998d2d77d9c911e0b0fa38 305 Gene3D G3DSA:3.40.50.300 2 230 3.0E-79 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02650 eb250b2287998d2d77d9c911e0b0fa38 305 SMART SM00382 30 216 3.6E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS05865 9d71d5c7e62b336099063f9922da46a4 406 SUPERFAMILY SSF53335 120 384 1.16E-79 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS05865 9d71d5c7e62b336099063f9922da46a4 406 PIRSF PIRSF003085 3 401 3.2E-133 T 09-03-2017 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 NA29_RS05865 9d71d5c7e62b336099063f9922da46a4 406 Pfam PF02353 Mycolic acid cyclopropane synthetase 109 380 5.1E-103 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS05865 9d71d5c7e62b336099063f9922da46a4 406 Gene3D G3DSA:3.40.50.150 108 383 4.2E-98 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 Pfam PF04542 Sigma-70 region 2 651 718 1.0E-20 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 PRINTS PR00046 Major sigma-70 factor signature 697 705 1.6E-30 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 PRINTS PR00046 Major sigma-70 factor signature 673 686 1.6E-30 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 PRINTS PR00046 Major sigma-70 factor signature 821 833 1.6E-30 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 PRINTS PR00046 Major sigma-70 factor signature 842 857 1.6E-30 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 PRINTS PR00046 Major sigma-70 factor signature 857 868 1.6E-30 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 Pfam PF00140 Sigma-70 factor, region 1.2 359 391 1.1E-13 T 09-03-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 Gene3D G3DSA:1.10.601.10 373 718 3.7E-129 T 09-03-2017 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 SUPERFAMILY SSF88946 376 716 3.92E-100 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 Pfam PF03979 Sigma-70 factor, region 1.1 263 341 8.0E-26 T 09-03-2017 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 Pfam PF04546 Sigma-70, non-essential region 400 618 3.5E-66 T 09-03-2017 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 Pfam PF04539 Sigma-70 region 3 728 804 5.7E-25 T 09-03-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 645 881 1.7E-118 T 09-03-2017 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 Pfam PF04545 Sigma-70, region 4 817 870 4.2E-19 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 673 686 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 842 868 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 Gene3D G3DSA:1.10.10.10 812 882 5.5E-33 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 645 870 8.3E-39 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 SUPERFAMILY SSF88659 722 795 4.09E-18 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 SUPERFAMILY SSF88659 779 880 3.18E-27 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 Gene3D G3DSA:1.10.10.10 722 773 2.1E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07990 9488253042fe96f3b3c496c794a5df70 884 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 263 882 42.008 T 09-03-2017 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 NA29_RS24530 bbfafe900834d86806f9776178d56853 117 SUPERFAMILY SSF52980 3 104 4.02E-17 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 NA29_RS24530 bbfafe900834d86806f9776178d56853 117 Gene3D G3DSA:3.40.1350.10 10 116 5.3E-34 T 09-03-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 NA29_RS24530 bbfafe900834d86806f9776178d56853 117 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 3 114 6.5E-27 T 09-03-2017 IPR003509 Uncharacterised protein family UPF0102 NA29_RS24530 bbfafe900834d86806f9776178d56853 117 Pfam PF02021 Uncharacterised protein family UPF0102 10 97 1.0E-26 T 09-03-2017 IPR003509 Uncharacterised protein family UPF0102 NA29_RS24530 bbfafe900834d86806f9776178d56853 117 Hamap MF_00048 UPF0102 protein YraN [yraN]. 2 111 21.746 T 09-03-2017 IPR003509 Uncharacterised protein family UPF0102 NA29_RS06125 66ee0a2c96d4cf4b8779dcde8f34d6b9 254 SMART SM00382 31 213 2.5E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS06125 66ee0a2c96d4cf4b8779dcde8f34d6b9 254 Gene3D G3DSA:3.40.50.300 3 230 8.5E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06125 66ee0a2c96d4cf4b8779dcde8f34d6b9 254 SUPERFAMILY SSF52540 5 234 1.21E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06125 66ee0a2c96d4cf4b8779dcde8f34d6b9 254 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 213 231 1.9E-5 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS06125 66ee0a2c96d4cf4b8779dcde8f34d6b9 254 Pfam PF00005 ABC transporter 23 164 2.0E-25 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS25060 c06d51353a7351ba8943e94356e3f2ed 572 Gene3D G3DSA:3.40.50.980 232 376 1.1E-47 T 09-03-2017 NA29_RS25060 c06d51353a7351ba8943e94356e3f2ed 572 ProSitePatterns PS00455 Putative AMP-binding domain signature. 217 228 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS25060 c06d51353a7351ba8943e94356e3f2ed 572 Pfam PF00501 AMP-binding enzyme 36 466 2.5E-106 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS25060 c06d51353a7351ba8943e94356e3f2ed 572 Gene3D G3DSA:3.30.300.30 463 561 2.2E-35 T 09-03-2017 NA29_RS25060 c06d51353a7351ba8943e94356e3f2ed 572 Pfam PF13193 AMP-binding enzyme C-terminal domain 475 550 3.6E-20 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS25060 c06d51353a7351ba8943e94356e3f2ed 572 Gene3D G3DSA:3.40.50.980 30 231 4.3E-38 T 09-03-2017 NA29_RS25060 c06d51353a7351ba8943e94356e3f2ed 572 SUPERFAMILY SSF56801 21 561 7.85E-160 T 09-03-2017 NA29_RS25060 c06d51353a7351ba8943e94356e3f2ed 572 Gene3D G3DSA:2.30.38.10 385 459 3.2E-27 T 09-03-2017 NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 SUPERFAMILY SSF53474 1108 1373 3.54E-42 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 Pfam PF00975 Thioesterase domain 1126 1250 8.5E-25 T 09-03-2017 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 SMART SM00823 Phosphopantetheine attachment site 1033 1103 6.2E-4 T 09-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 Gene3D G3DSA:3.40.50.980 520 672 6.4E-40 T 09-03-2017 NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 Gene3D G3DSA:2.30.38.10 834 910 4.3E-27 T 09-03-2017 NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 Pfam PF13745 HxxPF-repeated domain 385 473 5.8E-27 T 09-03-2017 NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 Gene3D G3DSA:3.40.50.1820 1111 1228 1.9E-36 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 Gene3D G3DSA:3.40.50.1820 1327 1391 1.9E-36 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 Pfam PF00550 Phosphopantetheine attachment site 1035 1098 2.9E-11 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 SUPERFAMILY SSF47336 1030 1099 3.53E-14 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 Gene3D G3DSA:1.10.1200.10 1028 1103 2.5E-21 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 Gene3D G3DSA:3.40.50.980 673 833 2.7E-29 T 09-03-2017 NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1057 1072 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 ProSitePatterns PS00455 Putative AMP-binding domain signature. 667 678 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 Gene3D G3DSA:3.30.300.30 915 1011 3.8E-26 T 09-03-2017 NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 SUPERFAMILY SSF52777 250 498 8.67E-61 T 09-03-2017 NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 SUPERFAMILY SSF52777 63 244 1.33E-46 T 09-03-2017 NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 Pfam PF00501 AMP-binding enzyme 526 921 1.7E-85 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 SUPERFAMILY SSF56801 520 1044 1.15E-127 T 09-03-2017 NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 Pfam PF00668 Condensation domain 61 362 5.5E-72 T 09-03-2017 IPR001242 Condensation domain NA29_RS08585 b4e0d3190ed0a8cae7cade1040bab9bd 1411 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 546 945 1.4E-115 T 09-03-2017 IPR010071 Amino acid adenylation domain NA29_RS15315 960da2a25fd04b4c61bb8483be884cdb 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 4.8E-33 T 09-03-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 NA29_RS15315 960da2a25fd04b4c61bb8483be884cdb 64 Gene3D G3DSA:1.10.10.600 1 64 2.3E-33 T 09-03-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 NA29_RS15315 960da2a25fd04b4c61bb8483be884cdb 64 SUPERFAMILY SSF140319 1 62 1.31E-27 T 09-03-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 NA29_RS15315 960da2a25fd04b4c61bb8483be884cdb 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 1.0E-34 T 09-03-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 NA29_RS15315 960da2a25fd04b4c61bb8483be884cdb 64 PIRSF PIRSF039003 1 64 2.0E-35 T 09-03-2017 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 NA29_RS11925 647fa88793188664660db985ebadf525 320 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 98 3.0E-12 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NA29_RS11925 647fa88793188664660db985ebadf525 320 Pfam PF13602 Zinc-binding dehydrogenase 186 315 1.9E-25 T 09-03-2017 NA29_RS11925 647fa88793188664660db985ebadf525 320 Gene3D G3DSA:3.40.50.720 150 244 9.5E-28 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11925 647fa88793188664660db985ebadf525 320 SMART SM00829 10 316 5.5E-43 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NA29_RS11925 647fa88793188664660db985ebadf525 320 SUPERFAMILY SSF51735 116 285 1.7E-44 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11925 647fa88793188664660db985ebadf525 320 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 144 165 - T 09-03-2017 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 NA29_RS11925 647fa88793188664660db985ebadf525 320 SUPERFAMILY SSF50129 1 148 1.45E-41 T 09-03-2017 IPR011032 GroES-like NA29_RS11925 647fa88793188664660db985ebadf525 320 Gene3D G3DSA:3.90.180.10 1 149 6.0E-48 T 09-03-2017 IPR011032 GroES-like NA29_RS22870 8e45452964d20f84fd51257ab0ee1b45 555 SUPERFAMILY SSF52540 301 523 7.3E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22870 8e45452964d20f84fd51257ab0ee1b45 555 SMART SM00382 31 236 7.0E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS22870 8e45452964d20f84fd51257ab0ee1b45 555 SMART SM00382 348 526 5.8E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS22870 8e45452964d20f84fd51257ab0ee1b45 555 SUPERFAMILY SSF52540 12 236 1.29E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22870 8e45452964d20f84fd51257ab0ee1b45 555 Gene3D G3DSA:3.40.50.300 321 537 1.8E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22870 8e45452964d20f84fd51257ab0ee1b45 555 Pfam PF12848 ABC transporter 230 306 3.8E-12 T 09-03-2017 IPR032781 ABC-transporter extension domain NA29_RS22870 8e45452964d20f84fd51257ab0ee1b45 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS22870 8e45452964d20f84fd51257ab0ee1b45 555 Gene3D G3DSA:3.40.50.300 13 105 5.4E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22870 8e45452964d20f84fd51257ab0ee1b45 555 Gene3D G3DSA:3.40.50.300 141 288 5.4E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22870 8e45452964d20f84fd51257ab0ee1b45 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 5.2E-297 T 09-03-2017 IPR022374 ABC transporter, ATP-binding protein, ChvD NA29_RS22870 8e45452964d20f84fd51257ab0ee1b45 555 Pfam PF00005 ABC transporter 340 473 1.8E-23 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS22870 8e45452964d20f84fd51257ab0ee1b45 555 Pfam PF00005 ABC transporter 22 191 2.0E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS08265 e07c9863c35819e6748a82f4eace712d 185 SUPERFAMILY SSF49777 30 184 3.92E-38 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein NA29_RS08265 e07c9863c35819e6748a82f4eace712d 185 Gene3D G3DSA:3.90.280.10 30 184 1.5E-43 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein NA29_RS08265 e07c9863c35819e6748a82f4eace712d 185 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 49 180 3.6E-27 T 09-03-2017 IPR005247 YbhB/YbcL NA29_RS08265 e07c9863c35819e6748a82f4eace712d 185 Pfam PF01161 Phosphatidylethanolamine-binding protein 43 183 3.9E-31 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 Gene3D G3DSA:2.60.40.420 132 307 1.1E-55 T 09-03-2017 IPR008972 Cupredoxin NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 212 260 - T 09-03-2017 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 SUPERFAMILY SSF81464 42 135 2.29E-28 T 09-03-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 46 126 6.8E-18 T 09-03-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 SUPERFAMILY SSF49503 189 324 3.11E-51 T 09-03-2017 IPR008972 Cupredoxin NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 SUPERFAMILY SSF49503 133 160 3.11E-51 T 09-03-2017 IPR008972 Cupredoxin NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 SUPERFAMILY SSF46626 285 383 2.96E-21 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 Gene3D G3DSA:1.10.287.90 46 131 6.8E-28 T 09-03-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 299 369 1.3E-11 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 141 267 5.8E-34 T 09-03-2017 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 PRINTS PR01166 Cytochrome c oxidase subunit II signature 211 231 1.9E-35 T 09-03-2017 NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 PRINTS PR01166 Cytochrome c oxidase subunit II signature 137 156 1.9E-35 T 09-03-2017 NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 PRINTS PR01166 Cytochrome c oxidase subunit II signature 115 135 1.9E-35 T 09-03-2017 NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 PRINTS PR01166 Cytochrome c oxidase subunit II signature 249 266 1.9E-35 T 09-03-2017 NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 PRINTS PR01166 Cytochrome c oxidase subunit II signature 187 208 1.9E-35 T 09-03-2017 NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 PRINTS PR01166 Cytochrome c oxidase subunit II signature 103 115 1.9E-35 T 09-03-2017 NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 Gene3D G3DSA:1.10.760.10 308 390 4.8E-24 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS02530 947c7332a747db1da6de9e49fa3ead04 409 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 54 276 7.9E-61 T 09-03-2017 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18390 98e829534f5710b6418ffec6eba3da4e 204 Pfam PF04011 LemA family 21 204 2.2E-67 T 09-03-2017 IPR007156 LemA NA29_RS18390 98e829534f5710b6418ffec6eba3da4e 204 SUPERFAMILY SSF140478 35 191 2.09E-56 T 09-03-2017 IPR023353 LemA-like domain NA29_RS18390 98e829534f5710b6418ffec6eba3da4e 204 Gene3D G3DSA:1.20.1440.20 26 204 6.0E-65 T 09-03-2017 IPR023353 LemA-like domain NA29_RS07355 38e9d9df5bf1c6c5d9010fccf4115757 161 SUPERFAMILY SSF56349 2 111 4.32E-10 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NA29_RS07355 38e9d9df5bf1c6c5d9010fccf4115757 161 Gene3D G3DSA:1.10.443.10 2 110 5.9E-13 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS02055 c4cb2392f8014baae70817b594656005 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 347 366 - T 09-03-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NA29_RS02055 c4cb2392f8014baae70817b594656005 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 124 1.4E-39 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS02055 c4cb2392f8014baae70817b594656005 393 SUPERFAMILY SSF47203 234 390 7.73E-45 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS02055 c4cb2392f8014baae70817b594656005 393 Gene3D G3DSA:1.20.140.10 223 390 6.9E-62 T 09-03-2017 NA29_RS02055 c4cb2392f8014baae70817b594656005 393 SUPERFAMILY SSF56645 7 248 1.24E-88 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NA29_RS02055 c4cb2392f8014baae70817b594656005 393 Gene3D G3DSA:1.10.540.10 5 125 1.4E-44 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS02055 c4cb2392f8014baae70817b594656005 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 223 2.2E-26 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NA29_RS02055 c4cb2392f8014baae70817b594656005 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 388 3.3E-39 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS02055 c4cb2392f8014baae70817b594656005 393 Gene3D G3DSA:2.40.110.10 127 222 6.5E-41 T 09-03-2017 NA29_RS02055 c4cb2392f8014baae70817b594656005 393 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 130 142 - T 09-03-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NA29_RS24260 678a08347e84f064084186b600af7753 454 Gene3D G3DSA:3.40.50.300 1 221 1.4E-80 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24260 678a08347e84f064084186b600af7753 454 SUPERFAMILY SSF52540 77 363 2.84E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24260 678a08347e84f064084186b600af7753 454 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 156 164 - T 09-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site NA29_RS24260 678a08347e84f064084186b600af7753 454 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 449 50.623 T 09-03-2017 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 NA29_RS24260 678a08347e84f064084186b600af7753 454 SMART SM00487 20 225 6.9E-60 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain NA29_RS24260 678a08347e84f064084186b600af7753 454 SMART SM00490 261 342 4.1E-32 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS24260 678a08347e84f064084186b600af7753 454 Pfam PF00271 Helicase conserved C-terminal domain 237 342 7.4E-26 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS24260 678a08347e84f064084186b600af7753 454 Gene3D G3DSA:3.40.50.300 222 373 6.2E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24260 678a08347e84f064084186b600af7753 454 Pfam PF00270 DEAD/DEAH box helicase 25 199 7.8E-51 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NA29_RS17840 7ba063c79908e1cec7a1aebc7ee271fa 360 Pfam PF00800 Prephenate dehydratase 94 269 1.6E-65 T 09-03-2017 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 NA29_RS17840 7ba063c79908e1cec7a1aebc7ee271fa 360 Gene3D G3DSA:1.20.59.10 5 89 1.5E-24 T 09-03-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 NA29_RS17840 7ba063c79908e1cec7a1aebc7ee271fa 360 TIGRFAM TIGR01807 CM_P2: chorismate mutase 9 82 2.6E-27 T 09-03-2017 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 NA29_RS17840 7ba063c79908e1cec7a1aebc7ee271fa 360 Pfam PF01842 ACT domain 279 344 4.0E-10 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 NA29_RS17840 7ba063c79908e1cec7a1aebc7ee271fa 360 Gene3D G3DSA:3.40.190.10 90 178 6.1E-35 T 09-03-2017 NA29_RS17840 7ba063c79908e1cec7a1aebc7ee271fa 360 Gene3D G3DSA:3.30.70.260 273 358 2.2E-31 T 09-03-2017 NA29_RS17840 7ba063c79908e1cec7a1aebc7ee271fa 360 SUPERFAMILY SSF53850 92 276 1.52E-61 T 09-03-2017 NA29_RS17840 7ba063c79908e1cec7a1aebc7ee271fa 360 Pfam PF01817 Chorismate mutase type II 13 90 4.5E-24 T 09-03-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 NA29_RS17840 7ba063c79908e1cec7a1aebc7ee271fa 360 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 306 313 - T 09-03-2017 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 NA29_RS17840 7ba063c79908e1cec7a1aebc7ee271fa 360 Gene3D G3DSA:3.40.190.10 179 256 8.2E-27 T 09-03-2017 NA29_RS17840 7ba063c79908e1cec7a1aebc7ee271fa 360 SUPERFAMILY SSF48600 8 94 1.83E-22 T 09-03-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 NA29_RS17840 7ba063c79908e1cec7a1aebc7ee271fa 360 SMART SM00830 13 92 2.5E-31 T 09-03-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 NA29_RS17840 7ba063c79908e1cec7a1aebc7ee271fa 360 PIRSF PIRSF001500 2 360 2.1E-142 T 09-03-2017 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 NA29_RS17840 7ba063c79908e1cec7a1aebc7ee271fa 360 SUPERFAMILY SSF55021 263 358 1.3E-27 T 09-03-2017 NA29_RS08340 56ff71b4d8da58aba5d861972d2b4569 789 SUPERFAMILY SSF141130 458 518 1.28E-77 T 09-03-2017 NA29_RS08340 56ff71b4d8da58aba5d861972d2b4569 789 SUPERFAMILY SSF141130 377 418 1.28E-77 T 09-03-2017 NA29_RS08340 56ff71b4d8da58aba5d861972d2b4569 789 SUPERFAMILY SSF141130 570 787 1.28E-77 T 09-03-2017 NA29_RS08340 56ff71b4d8da58aba5d861972d2b4569 789 Gene3D G3DSA:1.10.10.60 263 313 6.5E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08340 56ff71b4d8da58aba5d861972d2b4569 789 Gene3D G3DSA:3.10.28.20 690 788 3.0E-28 T 09-03-2017 NA29_RS08340 56ff71b4d8da58aba5d861972d2b4569 789 Gene3D G3DSA:1.10.10.60 212 262 2.2E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08340 56ff71b4d8da58aba5d861972d2b4569 789 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 295 1.2E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS08340 56ff71b4d8da58aba5d861972d2b4569 789 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 295 311 1.2E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS08340 56ff71b4d8da58aba5d861972d2b4569 789 SMART SM00342 226 311 2.0E-26 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS08340 56ff71b4d8da58aba5d861972d2b4569 789 Gene3D G3DSA:2.60.120.580 372 418 2.2E-57 T 09-03-2017 NA29_RS08340 56ff71b4d8da58aba5d861972d2b4569 789 Gene3D G3DSA:2.60.120.580 458 488 2.2E-57 T 09-03-2017 NA29_RS08340 56ff71b4d8da58aba5d861972d2b4569 789 Gene3D G3DSA:2.60.120.580 593 679 2.2E-57 T 09-03-2017 NA29_RS08340 56ff71b4d8da58aba5d861972d2b4569 789 SUPERFAMILY SSF46689 262 314 3.23E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08340 56ff71b4d8da58aba5d861972d2b4569 789 Pfam PF03069 Acetamidase/Formamidase family 613 773 6.3E-16 T 09-03-2017 IPR004304 Acetamidase/Formamidase GO:0016811 NA29_RS08340 56ff71b4d8da58aba5d861972d2b4569 789 Pfam PF03069 Acetamidase/Formamidase family 462 608 3.6E-8 T 09-03-2017 IPR004304 Acetamidase/Formamidase GO:0016811 NA29_RS08340 56ff71b4d8da58aba5d861972d2b4569 789 Pfam PF12833 Helix-turn-helix domain 233 311 6.5E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 SUPERFAMILY SSF53738 6 136 7.85E-38 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 Gene3D G3DSA:3.40.120.10 7 146 1.7E-34 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 262 369 7.7E-22 T 09-03-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 Gene3D G3DSA:3.40.120.10 176 253 9.0E-34 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 SUPERFAMILY SSF55957 370 465 1.65E-20 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 SUPERFAMILY SSF53738 159 259 1.45E-32 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 103 117 4.7E-25 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 237 252 4.7E-25 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 4.7E-25 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 208 221 4.7E-25 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 104 113 - T 09-03-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 Gene3D G3DSA:3.30.310.50 373 464 1.6E-26 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 161 257 2.1E-27 T 09-03-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 454 1.4E-10 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 Gene3D G3DSA:3.40.120.10 255 369 5.6E-44 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 SUPERFAMILY SSF53738 262 359 3.61E-32 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS21605 b3ca9571ee8bb68e8735b66929aa1812 465 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 11 145 3.5E-35 T 09-03-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS14480 89d58132081e47b312272c10edad0a07 400 Gene3D G3DSA:3.40.50.10540 5 221 3.2E-111 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS14480 89d58132081e47b312272c10edad0a07 400 Gene3D G3DSA:3.40.50.10540 310 400 3.2E-111 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS14480 89d58132081e47b312272c10edad0a07 400 Gene3D G3DSA:3.30.1540.10 227 309 2.4E-27 T 09-03-2017 NA29_RS14480 89d58132081e47b312272c10edad0a07 400 SUPERFAMILY SSF89796 5 400 2.62E-134 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS14480 89d58132081e47b312272c10edad0a07 400 Pfam PF02515 CoA-transferase family III 7 377 2.8E-126 T 09-03-2017 IPR003673 CoA-transferase family III GO:0003824 NA29_RS06850 4d7eb79eaaa76a8d3bc4d3170307fcbd 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.2E-13 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS06850 4d7eb79eaaa76a8d3bc4d3170307fcbd 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.2E-13 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS06850 4d7eb79eaaa76a8d3bc4d3170307fcbd 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.2E-13 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS06850 4d7eb79eaaa76a8d3bc4d3170307fcbd 129 Gene3D G3DSA:1.10.1660.10 56 128 6.6E-30 T 09-03-2017 NA29_RS06850 4d7eb79eaaa76a8d3bc4d3170307fcbd 129 Pfam PF00376 MerR family regulatory protein 2 39 7.8E-18 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS06850 4d7eb79eaaa76a8d3bc4d3170307fcbd 129 Gene3D G3DSA:1.10.1660.10 1 55 1.3E-26 T 09-03-2017 NA29_RS06850 4d7eb79eaaa76a8d3bc4d3170307fcbd 129 SMART SM00422 1 70 2.1E-34 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS06850 4d7eb79eaaa76a8d3bc4d3170307fcbd 129 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS06850 4d7eb79eaaa76a8d3bc4d3170307fcbd 129 SUPERFAMILY SSF46955 1 126 5.13E-40 T 09-03-2017 IPR009061 Putative DNA-binding domain NA29_RS06850 4d7eb79eaaa76a8d3bc4d3170307fcbd 129 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 1.3E-53 T 09-03-2017 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 NA29_RS06850 4d7eb79eaaa76a8d3bc4d3170307fcbd 129 Pfam PF09278 MerR, DNA binding 45 108 2.5E-20 T 09-03-2017 IPR015358 Transcription regulator MerR, DNA binding NA29_RS01210 663a93eeb8203816f2425bae812f1377 290 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 278 2.2E-35 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS00230 5ca21899c3e2ee553a858a3d565fd06c 111 Pfam PF11811 Domain of unknown function (DUF3331) 21 96 2.3E-20 T 09-03-2017 IPR021769 Protein of unknown function DUF3331 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 Gene3D G3DSA:3.30.70.100 3 72 7.7E-21 T 09-03-2017 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 Pfam PF00702 haloacid dehalogenase-like hydrolase 485 741 7.8E-41 T 09-03-2017 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 Gene3D G3DSA:3.40.1110.10 504 654 3.3E-10 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 SUPERFAMILY SSF81653 288 389 1.7E-24 T 09-03-2017 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 491 497 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 SUPERFAMILY SSF55008 75 143 3.01E-20 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 SUPERFAMILY SSF81665 776 805 9.15E-16 T 09-03-2017 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 SUPERFAMILY SSF81665 390 482 9.15E-16 T 09-03-2017 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 SUPERFAMILY SSF81665 253 289 9.15E-16 T 09-03-2017 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 Pfam PF00122 E1-E2 ATPase 256 480 1.4E-67 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 Pfam PF00403 Heavy-metal-associated domain 9 70 1.6E-15 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 Pfam PF00403 Heavy-metal-associated domain 78 138 3.7E-14 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 Gene3D G3DSA:3.30.70.100 75 151 2.9E-23 T 09-03-2017 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 645 810 2.3E-42 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 258 511 1.5E-44 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 ProSitePatterns PS01047 Heavy-metal-associated domain. 80 109 - T 09-03-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 SUPERFAMILY SSF81660 491 628 5.89E-17 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 339 353 7.6E-25 T 09-03-2017 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 750 762 7.6E-25 T 09-03-2017 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 489 503 7.6E-25 T 09-03-2017 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 674 684 7.6E-25 T 09-03-2017 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 727 746 7.6E-25 T 09-03-2017 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 SUPERFAMILY SSF56784 487 507 9.05E-59 T 09-03-2017 IPR023214 HAD-like domain NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 SUPERFAMILY SSF56784 643 827 9.05E-59 T 09-03-2017 IPR023214 HAD-like domain NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 SUPERFAMILY SSF56784 598 606 9.05E-59 T 09-03-2017 IPR023214 HAD-like domain NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 09-03-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 Gene3D G3DSA:3.40.50.1000 460 503 1.3E-54 T 09-03-2017 IPR023214 HAD-like domain NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 Gene3D G3DSA:3.40.50.1000 655 795 1.3E-54 T 09-03-2017 IPR023214 HAD-like domain NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 Gene3D G3DSA:2.70.150.10 226 390 3.9E-30 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 PRINTS PR00941 Cadmium-transporting ATPase signature 89 110 2.6E-9 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 PRINTS PR00941 Cadmium-transporting ATPase signature 374 388 2.6E-9 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 PRINTS PR00941 Cadmium-transporting ATPase signature 7 16 2.6E-9 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 PRINTS PR00941 Cadmium-transporting ATPase signature 208 220 2.6E-9 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 PRINTS PR00941 Cadmium-transporting ATPase signature 355 371 2.6E-9 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 220 829 7.6E-182 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 8 72 5.9E-10 T 09-03-2017 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 NA29_RS06840 88131810c0f8fd0d437b99aa43e0143b 861 SUPERFAMILY SSF55008 5 72 8.64E-17 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NA29_RS08255 2c1480a39bf86a1b7ac1b96f6c2abde1 319 Pfam PF13533 Biotin-lipoyl like 38 84 9.5E-10 T 09-03-2017 NA29_RS08255 2c1480a39bf86a1b7ac1b96f6c2abde1 319 SUPERFAMILY SSF111369 38 92 7.59E-6 T 09-03-2017 NA29_RS08255 2c1480a39bf86a1b7ac1b96f6c2abde1 319 Gene3D G3DSA:2.40.50.100 38 70 1.4E-10 T 09-03-2017 NA29_RS08255 2c1480a39bf86a1b7ac1b96f6c2abde1 319 Gene3D G3DSA:2.40.50.100 197 229 1.4E-10 T 09-03-2017 NA29_RS08255 2c1480a39bf86a1b7ac1b96f6c2abde1 319 SUPERFAMILY SSF111369 141 254 7.19E-8 T 09-03-2017 NA29_RS08255 2c1480a39bf86a1b7ac1b96f6c2abde1 319 Pfam PF13437 HlyD family secretion protein 202 277 4.9E-15 T 09-03-2017 NA29_RS09970 a1f955d72362956ae0c43a95aae8ad19 393 Gene3D G3DSA:3.40.47.10 277 392 1.8E-66 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS09970 a1f955d72362956ae0c43a95aae8ad19 393 Gene3D G3DSA:3.40.47.10 144 194 1.8E-66 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS09970 a1f955d72362956ae0c43a95aae8ad19 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 09-03-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 NA29_RS09970 a1f955d72362956ae0c43a95aae8ad19 393 SUPERFAMILY SSF53901 271 392 3.96E-46 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS09970 a1f955d72362956ae0c43a95aae8ad19 393 Pfam PF02803 Thiolase, C-terminal domain 271 392 5.0E-47 T 09-03-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 NA29_RS09970 a1f955d72362956ae0c43a95aae8ad19 393 Pfam PF00108 Thiolase, N-terminal domain 5 262 1.6E-91 T 09-03-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 NA29_RS09970 a1f955d72362956ae0c43a95aae8ad19 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 09-03-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 NA29_RS09970 a1f955d72362956ae0c43a95aae8ad19 393 PIRSF PIRSF000429 1 393 2.0E-132 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS09970 a1f955d72362956ae0c43a95aae8ad19 393 SUPERFAMILY SSF53901 4 269 1.08E-86 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS09970 a1f955d72362956ae0c43a95aae8ad19 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 391 1.9E-141 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS09970 a1f955d72362956ae0c43a95aae8ad19 393 Gene3D G3DSA:3.40.47.10 195 275 1.5E-70 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS09970 a1f955d72362956ae0c43a95aae8ad19 393 Gene3D G3DSA:3.40.47.10 4 125 1.5E-70 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS24750 2759527d22f4f99f53508067b73518fa 464 SMART SM00387 347 457 3.2E-32 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS24750 2759527d22f4f99f53508067b73518fa 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 3.1E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS24750 2759527d22f4f99f53508067b73518fa 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 3.1E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS24750 2759527d22f4f99f53508067b73518fa 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 3.1E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS24750 2759527d22f4f99f53508067b73518fa 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 3.1E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS24750 2759527d22f4f99f53508067b73518fa 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 299 1.1E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS24750 2759527d22f4f99f53508067b73518fa 464 Gene3D G3DSA:3.30.565.10 306 460 4.5E-37 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS24750 2759527d22f4f99f53508067b73518fa 464 Gene3D G3DSA:1.10.287.130 227 295 2.8E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS24750 2759527d22f4f99f53508067b73518fa 464 SUPERFAMILY SSF55874 292 455 4.06E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS24750 2759527d22f4f99f53508067b73518fa 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 456 4.5E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS24750 2759527d22f4f99f53508067b73518fa 464 SMART SM00388 235 300 5.5E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS24750 2759527d22f4f99f53508067b73518fa 464 Pfam PF08521 Two-component sensor kinase N-terminal 17 158 3.5E-39 T 09-03-2017 IPR013727 Two-component sensor kinase, N-terminal NA29_RS24750 2759527d22f4f99f53508067b73518fa 464 SUPERFAMILY SSF47384 219 299 1.18E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS24225 74eb0021ec95a4f9a0e2ee2f13215bd3 229 Pfam PF00156 Phosphoribosyl transferase domain 73 160 3.8E-13 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 NA29_RS24225 74eb0021ec95a4f9a0e2ee2f13215bd3 229 Gene3D G3DSA:3.40.50.2020 12 218 3.4E-49 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS24225 74eb0021ec95a4f9a0e2ee2f13215bd3 229 SUPERFAMILY SSF53271 15 220 1.11E-47 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS24225 74eb0021ec95a4f9a0e2ee2f13215bd3 229 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 16 185 8.0E-34 T 09-03-2017 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS24225 74eb0021ec95a4f9a0e2ee2f13215bd3 229 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 229 28.762 T 09-03-2017 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS11215 68710e7e8c8a5a0c9d0ed3eba0d4c127 214 Gene3D G3DSA:1.10.10.10 120 208 4.3E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11215 68710e7e8c8a5a0c9d0ed3eba0d4c127 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.9E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS11215 68710e7e8c8a5a0c9d0ed3eba0d4c127 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.9E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS11215 68710e7e8c8a5a0c9d0ed3eba0d4c127 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.9E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS11215 68710e7e8c8a5a0c9d0ed3eba0d4c127 214 SUPERFAMILY SSF46894 134 208 2.35E-19 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS11215 68710e7e8c8a5a0c9d0ed3eba0d4c127 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 3.1E-17 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS11215 68710e7e8c8a5a0c9d0ed3eba0d4c127 214 Gene3D G3DSA:3.40.50.2300 1 119 5.7E-36 T 09-03-2017 NA29_RS11215 68710e7e8c8a5a0c9d0ed3eba0d4c127 214 Pfam PF00072 Response regulator receiver domain 3 115 4.5E-28 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS11215 68710e7e8c8a5a0c9d0ed3eba0d4c127 214 SUPERFAMILY SSF52172 1 132 3.56E-34 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS11215 68710e7e8c8a5a0c9d0ed3eba0d4c127 214 SMART SM00448 1 114 2.0E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS11215 68710e7e8c8a5a0c9d0ed3eba0d4c127 214 SMART SM00421 145 202 2.0E-16 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS12230 172fe617fc4fa280f2cba0730839eb88 197 PIRSF PIRSF036893 2 189 2.3E-33 T 09-03-2017 IPR022271 Lipocalin, ApoD type NA29_RS12230 172fe617fc4fa280f2cba0730839eb88 197 Pfam PF08212 Lipocalin-like domain 39 180 2.9E-31 T 09-03-2017 IPR000566 Lipocalin/cytosolic fatty-acid binding domain NA29_RS12230 172fe617fc4fa280f2cba0730839eb88 197 SUPERFAMILY SSF50814 12 180 7.03E-34 T 09-03-2017 IPR011038 Calycin-like NA29_RS12230 172fe617fc4fa280f2cba0730839eb88 197 Gene3D G3DSA:2.40.128.20 8 180 2.9E-35 T 09-03-2017 IPR012674 Calycin NA29_RS12230 172fe617fc4fa280f2cba0730839eb88 197 PRINTS PR01171 Bacterial lipocalin signature 39 53 1.0E-6 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 NA29_RS12230 172fe617fc4fa280f2cba0730839eb88 197 PRINTS PR01171 Bacterial lipocalin signature 127 135 1.0E-6 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 NA29_RS12230 172fe617fc4fa280f2cba0730839eb88 197 PRINTS PR01171 Bacterial lipocalin signature 110 124 1.0E-6 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 NA29_RS12230 172fe617fc4fa280f2cba0730839eb88 197 PRINTS PR01171 Bacterial lipocalin signature 142 153 1.0E-6 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 NA29_RS12230 172fe617fc4fa280f2cba0730839eb88 197 PRINTS PR01171 Bacterial lipocalin signature 169 179 1.0E-6 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 NA29_RS04990 92e3b7826f23fdc3afa3bf8621c5b78f 297 SUPERFAMILY SSF53474 43 256 1.32E-47 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS04990 92e3b7826f23fdc3afa3bf8621c5b78f 297 Gene3D G3DSA:3.40.50.1820 43 260 5.1E-55 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS04990 92e3b7826f23fdc3afa3bf8621c5b78f 297 Pfam PF07859 alpha/beta hydrolase fold 71 165 1.4E-19 T 09-03-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NA29_RS14800 4bc3933d3fb0a6331f5ace54832aecf1 376 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 374 1.5E-189 T 09-03-2017 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 NA29_RS14800 4bc3933d3fb0a6331f5ace54832aecf1 376 Gene3D G3DSA:3.40.50.720 1 142 6.4E-66 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS14800 4bc3933d3fb0a6331f5ace54832aecf1 376 SUPERFAMILY SSF51735 1 147 2.14E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS14800 4bc3933d3fb0a6331f5ace54832aecf1 376 SUPERFAMILY SSF55347 134 361 1.38E-71 T 09-03-2017 NA29_RS14800 4bc3933d3fb0a6331f5ace54832aecf1 376 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 360 5.9E-52 T 09-03-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 NA29_RS14800 4bc3933d3fb0a6331f5ace54832aecf1 376 SMART SM00859 3 122 9.9E-30 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 NA29_RS14800 4bc3933d3fb0a6331f5ace54832aecf1 376 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 122 1.6E-26 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 NA29_RS14800 4bc3933d3fb0a6331f5ace54832aecf1 376 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 268 282 - T 09-03-2017 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 NA29_RS14800 4bc3933d3fb0a6331f5ace54832aecf1 376 PIRSF PIRSF000148 1 376 1.6E-66 T 09-03-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 NA29_RS14800 4bc3933d3fb0a6331f5ace54832aecf1 376 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 374 33.653 T 09-03-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 NA29_RS14800 4bc3933d3fb0a6331f5ace54832aecf1 376 Gene3D G3DSA:3.30.360.10 143 357 2.5E-70 T 09-03-2017 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 5.4E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 5.4E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.4E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 5.4E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 5.4E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 5.4E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.4E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 5.4E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.4E-74 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 Pfam PF00873 AcrB/AcrD/AcrF family 4 1007 6.9E-304 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 SUPERFAMILY SSF82714 184 266 8.24E-17 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 SUPERFAMILY SSF82866 785 1010 6.02E-44 T 09-03-2017 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 SUPERFAMILY SSF82693 557 647 2.82E-10 T 09-03-2017 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 SUPERFAMILY SSF82693 42 132 8.2E-21 T 09-03-2017 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 Gene3D G3DSA:3.30.70.1430 42 141 1.3E-26 T 09-03-2017 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 Gene3D G3DSA:3.30.70.1430 560 643 2.6E-6 T 09-03-2017 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 SUPERFAMILY SSF82693 136 182 1.23E-22 T 09-03-2017 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 SUPERFAMILY SSF82693 268 324 1.23E-22 T 09-03-2017 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 Gene3D G3DSA:1.10.3850.10 793 1009 1.6E-50 T 09-03-2017 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 Gene3D G3DSA:1.20.1640.10 287 494 9.2E-55 T 09-03-2017 NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 Gene3D G3DSA:3.30.2090.10 702 786 9.5E-22 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 Gene3D G3DSA:3.30.2090.10 184 265 4.0E-18 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 SUPERFAMILY SSF82714 702 787 2.88E-20 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS00995 5314a9a844a636156943eecea47bad2b 1053 SUPERFAMILY SSF82866 291 490 1.07E-45 T 09-03-2017 NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 Pfam PF10397 Adenylosuccinate lyase C-terminus 363 440 1.5E-18 T 09-03-2017 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 Pfam PF00206 Lyase 15 296 2.3E-48 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 Gene3D G3DSA:1.20.200.10 102 368 7.8E-85 T 09-03-2017 NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 SUPERFAMILY SSF48557 11 442 1.02E-107 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 PRINTS PR00149 Fumarate lyase superfamily signature 229 256 4.4E-22 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 PRINTS PR00149 Fumarate lyase superfamily signature 99 117 4.4E-22 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 PRINTS PR00149 Fumarate lyase superfamily signature 144 162 4.4E-22 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 PRINTS PR00149 Fumarate lyase superfamily signature 274 290 4.4E-22 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 SMART SM00998 362 441 3.4E-27 T 09-03-2017 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 ProSitePatterns PS00163 Fumarate lyases signature. 274 283 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 Gene3D G3DSA:1.10.40.30 369 441 1.3E-27 T 09-03-2017 NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 Gene3D G3DSA:1.10.275.10 10 101 7.5E-31 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 PRINTS PR00145 Argininosuccinate lyase family signature 98 120 1.5E-8 T 09-03-2017 NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 PRINTS PR00145 Argininosuccinate lyase family signature 274 290 1.5E-8 T 09-03-2017 NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 PRINTS PR00145 Argininosuccinate lyase family signature 229 253 1.5E-8 T 09-03-2017 NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 PRINTS PR00145 Argininosuccinate lyase family signature 139 159 1.5E-8 T 09-03-2017 NA29_RS18815 6ce101419c87e4ee44ce501cd3e3476c 458 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 5 345 2.4E-122 T 09-03-2017 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 NA29_RS24200 058517676a1e410d2bc4cd51450816cb 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.6E-16 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS24200 058517676a1e410d2bc4cd51450816cb 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.6E-16 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS24200 058517676a1e410d2bc4cd51450816cb 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.6E-16 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS24200 058517676a1e410d2bc4cd51450816cb 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 7.2E-21 T 09-03-2017 NA29_RS24200 058517676a1e410d2bc4cd51450816cb 162 SUPERFAMILY SSF46785 5 65 1.08E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS24200 058517676a1e410d2bc4cd51450816cb 162 SUPERFAMILY SSF54909 66 161 5.77E-19 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS24200 058517676a1e410d2bc4cd51450816cb 162 Pfam PF01037 Lrp/AsnC ligand binding domain 72 151 8.2E-20 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS24200 058517676a1e410d2bc4cd51450816cb 162 Gene3D G3DSA:3.30.70.920 59 149 6.6E-31 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS24200 058517676a1e410d2bc4cd51450816cb 162 SMART SM00344 6 121 6.7E-38 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NA29_RS24200 058517676a1e410d2bc4cd51450816cb 162 Gene3D G3DSA:1.10.10.10 3 57 2.9E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07670 9f4a95ee241b91a42e6afe52be944e1e 224 SUPERFAMILY SSF46785 17 105 3.73E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07670 9f4a95ee241b91a42e6afe52be944e1e 224 SMART SM00895 91 213 1.3E-17 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS07670 9f4a95ee241b91a42e6afe52be944e1e 224 Gene3D G3DSA:1.10.10.10 12 82 4.7E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07670 9f4a95ee241b91a42e6afe52be944e1e 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 4.6E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS07670 9f4a95ee241b91a42e6afe52be944e1e 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 4.6E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS07670 9f4a95ee241b91a42e6afe52be944e1e 224 SUPERFAMILY SSF48008 88 221 2.62E-26 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS07670 9f4a95ee241b91a42e6afe52be944e1e 224 SMART SM00345 23 81 7.4E-20 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS07670 9f4a95ee241b91a42e6afe52be944e1e 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 81 6.3E-20 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS07670 9f4a95ee241b91a42e6afe52be944e1e 224 Pfam PF07729 FCD domain 91 212 2.5E-23 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS07670 9f4a95ee241b91a42e6afe52be944e1e 224 Gene3D G3DSA:1.20.120.530 85 222 1.0E-27 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS10595 0301b54d9ec0492b3738fc8444153b7d 354 SUPERFAMILY SSF55729 2 346 1.08E-114 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS10595 0301b54d9ec0492b3738fc8444153b7d 354 Pfam PF04958 Arginine N-succinyltransferase beta subunit 3 344 2.4E-126 T 09-03-2017 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 NA29_RS10595 0301b54d9ec0492b3738fc8444153b7d 354 Gene3D G3DSA:3.40.630.30 4 140 9.0E-8 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS10595 0301b54d9ec0492b3738fc8444153b7d 354 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 346 9.2E-132 T 09-03-2017 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 NA29_RS10595 0301b54d9ec0492b3738fc8444153b7d 354 Gene3D G3DSA:2.40.40.20 294 346 1.2E-8 T 09-03-2017 NA29_RS10595 0301b54d9ec0492b3738fc8444153b7d 354 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 346 4.8E-127 T 09-03-2017 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 NA29_RS14595 702a101e3495faf14be51e9b6dc504f5 351 Gene3D G3DSA:1.10.3720.10 111 334 6.1E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS14595 702a101e3495faf14be51e9b6dc504f5 351 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 137 344 2.4E-37 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS14595 702a101e3495faf14be51e9b6dc504f5 351 SUPERFAMILY SSF161098 111 333 1.96E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS10385 6b23c4aa53560ac0f6241a5db27bc093 552 Gene3D G3DSA:1.10.1390.10 505 543 1.4E-14 T 09-03-2017 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS10385 6b23c4aa53560ac0f6241a5db27bc093 552 Gene3D G3DSA:3.40.50.10490 103 296 1.2E-69 T 09-03-2017 NA29_RS10385 6b23c4aa53560ac0f6241a5db27bc093 552 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 495 512 - T 09-03-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS10385 6b23c4aa53560ac0f6241a5db27bc093 552 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 50 522 38.98 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS10385 6b23c4aa53560ac0f6241a5db27bc093 552 Pfam PF00342 Phosphoglucose isomerase 56 541 4.2E-193 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS10385 6b23c4aa53560ac0f6241a5db27bc093 552 SUPERFAMILY SSF53697 9 545 1.33E-190 T 09-03-2017 NA29_RS10385 6b23c4aa53560ac0f6241a5db27bc093 552 Gene3D G3DSA:3.40.50.10490 298 504 2.1E-122 T 09-03-2017 NA29_RS10385 6b23c4aa53560ac0f6241a5db27bc093 552 Gene3D G3DSA:3.40.50.10490 11 102 2.1E-122 T 09-03-2017 NA29_RS10385 6b23c4aa53560ac0f6241a5db27bc093 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 266 284 1.5E-50 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS10385 6b23c4aa53560ac0f6241a5db27bc093 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 495 1.5E-50 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS10385 6b23c4aa53560ac0f6241a5db27bc093 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 495 508 1.5E-50 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS10385 6b23c4aa53560ac0f6241a5db27bc093 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 154 173 1.5E-50 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS10385 6b23c4aa53560ac0f6241a5db27bc093 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 343 364 1.5E-50 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS10385 6b23c4aa53560ac0f6241a5db27bc093 552 PRINTS PR00662 Glucose-6-phosphate isomerase signature 463 481 1.5E-50 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS10385 6b23c4aa53560ac0f6241a5db27bc093 552 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 270 283 - T 09-03-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS21220 88c59c3c04b132bfb84f5713bb255f6b 294 SUPERFAMILY SSF52172 16 145 4.7E-39 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS21220 88c59c3c04b132bfb84f5713bb255f6b 294 SUPERFAMILY SSF46689 230 279 3.0E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS21220 88c59c3c04b132bfb84f5713bb255f6b 294 Gene3D G3DSA:3.40.50.2300 21 143 4.4E-38 T 09-03-2017 NA29_RS21220 88c59c3c04b132bfb84f5713bb255f6b 294 SMART SM00448 24 137 2.5E-37 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS21220 88c59c3c04b132bfb84f5713bb255f6b 294 Pfam PF00072 Response regulator receiver domain 26 136 1.1E-23 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS21220 88c59c3c04b132bfb84f5713bb255f6b 294 Gene3D G3DSA:1.10.10.60 232 279 1.7E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS21220 88c59c3c04b132bfb84f5713bb255f6b 294 SMART SM00342 193 276 8.2E-26 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS21220 88c59c3c04b132bfb84f5713bb255f6b 294 Pfam PF12833 Helix-turn-helix domain 199 277 3.2E-24 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS21220 88c59c3c04b132bfb84f5713bb255f6b 294 Gene3D G3DSA:1.10.10.60 180 231 3.0E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS21220 88c59c3c04b132bfb84f5713bb255f6b 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS21220 88c59c3c04b132bfb84f5713bb255f6b 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 4.2E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS21220 88c59c3c04b132bfb84f5713bb255f6b 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 4.2E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS15235 5ae79fa035ed7b5bfc37c383657aae36 241 Pfam PF00005 ABC transporter 40 188 1.0E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS15235 5ae79fa035ed7b5bfc37c383657aae36 241 SUPERFAMILY SSF52540 20 238 1.77E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15235 5ae79fa035ed7b5bfc37c383657aae36 241 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS15235 5ae79fa035ed7b5bfc37c383657aae36 241 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 20 238 4.5E-95 T 09-03-2017 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 NA29_RS15235 5ae79fa035ed7b5bfc37c383657aae36 241 SMART SM00382 49 238 9.4E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS15235 5ae79fa035ed7b5bfc37c383657aae36 241 Gene3D G3DSA:3.40.50.300 19 237 8.2E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11315 4b6bbdd59c9983a641a811880a437ef8 317 Pfam PF07859 alpha/beta hydrolase fold 89 208 4.8E-20 T 09-03-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NA29_RS11315 4b6bbdd59c9983a641a811880a437ef8 317 Gene3D G3DSA:3.40.50.1820 54 312 1.1E-44 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS11315 4b6bbdd59c9983a641a811880a437ef8 317 SUPERFAMILY SSF53474 41 311 2.34E-40 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS07110 dc83cb75dec80044cd008c9a24f59169 305 Gene3D G3DSA:3.40.190.10 176 263 6.6E-18 T 09-03-2017 NA29_RS07110 dc83cb75dec80044cd008c9a24f59169 305 Pfam PF03466 LysR substrate binding domain 90 293 8.4E-35 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS07110 dc83cb75dec80044cd008c9a24f59169 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 3.2E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS07110 dc83cb75dec80044cd008c9a24f59169 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS07110 dc83cb75dec80044cd008c9a24f59169 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS07110 dc83cb75dec80044cd008c9a24f59169 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS07110 dc83cb75dec80044cd008c9a24f59169 305 Gene3D G3DSA:3.40.190.10 92 175 3.8E-17 T 09-03-2017 NA29_RS07110 dc83cb75dec80044cd008c9a24f59169 305 SUPERFAMILY SSF46785 2 111 1.77E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07110 dc83cb75dec80044cd008c9a24f59169 305 Gene3D G3DSA:1.10.10.10 1 85 6.9E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07110 dc83cb75dec80044cd008c9a24f59169 305 SUPERFAMILY SSF53850 91 296 4.48E-36 T 09-03-2017 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 SUPERFAMILY SSF56425 241 359 5.23E-44 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 Pfam PF02910 Fumarate reductase flavoprotein C-term 465 590 3.9E-41 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 Pfam PF00890 FAD binding domain 14 408 5.4E-117 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 PIRSF PIRSF000171 4 581 1.1E-40 T 09-03-2017 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 SUPERFAMILY SSF46977 455 591 2.75E-46 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 Gene3D G3DSA:3.50.50.60 355 429 2.2E-119 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 Gene3D G3DSA:3.50.50.60 8 247 2.2E-119 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 48 57 - T 09-03-2017 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 7.6E-6 T 09-03-2017 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 386 393 7.6E-6 T 09-03-2017 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 SUPERFAMILY SSF51905 363 433 1.47E-78 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 SUPERFAMILY SSF51905 9 264 1.47E-78 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 Gene3D G3DSA:3.90.700.10 248 354 2.3E-42 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 14 590 4.8E-240 T 09-03-2017 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 Gene3D G3DSA:4.10.80.40 559 591 1.6E-22 T 09-03-2017 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 Gene3D G3DSA:1.20.58.100 450 558 8.0E-38 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS14840 141bcce2afafa4dffb64237d30749830 591 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 11 591 2.3E-283 T 09-03-2017 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS14530 59e2e69cdc025fd9c480ab6d2ffcb5fe 452 Pfam PF00158 Sigma-54 interaction domain 143 309 1.1E-67 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NA29_RS14530 59e2e69cdc025fd9c480ab6d2ffcb5fe 452 Pfam PF02954 Bacterial regulatory protein, Fis family 401 440 2.9E-8 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS14530 59e2e69cdc025fd9c480ab6d2ffcb5fe 452 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NA29_RS14530 59e2e69cdc025fd9c480ab6d2ffcb5fe 452 SUPERFAMILY SSF46689 356 443 6.27E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS14530 59e2e69cdc025fd9c480ab6d2ffcb5fe 452 Gene3D G3DSA:1.10.10.60 396 443 1.6E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS14530 59e2e69cdc025fd9c480ab6d2ffcb5fe 452 Gene3D G3DSA:1.10.8.60 317 385 3.4E-21 T 09-03-2017 NA29_RS14530 59e2e69cdc025fd9c480ab6d2ffcb5fe 452 Gene3D G3DSA:3.40.50.300 141 315 5.1E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14530 59e2e69cdc025fd9c480ab6d2ffcb5fe 452 SMART SM00382 163 306 2.1E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS14530 59e2e69cdc025fd9c480ab6d2ffcb5fe 452 SUPERFAMILY SSF52540 143 384 1.73E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14530 59e2e69cdc025fd9c480ab6d2ffcb5fe 452 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site NA29_RS03830 8f77158bd7e0bb326e1937c1e022ab9d 313 Gene3D G3DSA:3.40.190.10 100 192 9.3E-23 T 09-03-2017 NA29_RS03830 8f77158bd7e0bb326e1937c1e022ab9d 313 SUPERFAMILY SSF53850 31 248 4.7E-40 T 09-03-2017 NA29_RS03830 8f77158bd7e0bb326e1937c1e022ab9d 313 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 26 306 1.3E-59 T 09-03-2017 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 NA29_RS03830 8f77158bd7e0bb326e1937c1e022ab9d 313 Pfam PF09084 NMT1/THI5 like 57 234 1.3E-19 T 09-03-2017 IPR015168 SsuA/THI5-like NA29_RS04080 478d8292e9ba24397a5494349f754138 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 275 1.1E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS04080 478d8292e9ba24397a5494349f754138 281 SUPERFAMILY SSF161098 56 261 1.83E-40 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS04080 478d8292e9ba24397a5494349f754138 281 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 56 170 5.1E-12 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NA29_RS04080 478d8292e9ba24397a5494349f754138 281 Gene3D G3DSA:1.10.3720.10 55 275 1.1E-40 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS23610 aa5611d9f476bd40d5e1080ede9f5b63 488 Gene3D G3DSA:1.10.1060.10 3 144 4.7E-40 T 09-03-2017 NA29_RS23610 aa5611d9f476bd40d5e1080ede9f5b63 488 SUPERFAMILY SSF51971 369 481 1.41E-10 T 09-03-2017 NA29_RS23610 aa5611d9f476bd40d5e1080ede9f5b63 488 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 131 8.4E-25 T 09-03-2017 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 NA29_RS23610 aa5611d9f476bd40d5e1080ede9f5b63 488 SUPERFAMILY SSF46548 2 154 1.6E-38 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 NA29_RS23610 aa5611d9f476bd40d5e1080ede9f5b63 488 SUPERFAMILY SSF51971 142 411 8.95E-66 T 09-03-2017 NA29_RS23610 aa5611d9f476bd40d5e1080ede9f5b63 488 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 487 1.2E-225 T 09-03-2017 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 NA29_RS23610 aa5611d9f476bd40d5e1080ede9f5b63 488 Gene3D G3DSA:3.50.50.60 145 255 3.4E-30 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS23610 aa5611d9f476bd40d5e1080ede9f5b63 488 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 8.8E-20 T 09-03-2017 NA29_RS23610 aa5611d9f476bd40d5e1080ede9f5b63 488 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 8.8E-20 T 09-03-2017 NA29_RS23610 aa5611d9f476bd40d5e1080ede9f5b63 488 PRINTS PR00419 Adrenodoxin reductase family signature 297 311 8.8E-20 T 09-03-2017 NA29_RS23610 aa5611d9f476bd40d5e1080ede9f5b63 488 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 469 5.9E-28 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS23610 aa5611d9f476bd40d5e1080ede9f5b63 488 Gene3D G3DSA:3.50.50.60 256 398 5.2E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS23610 aa5611d9f476bd40d5e1080ede9f5b63 488 Gene3D G3DSA:3.50.50.60 399 480 2.4E-15 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS11900 7f827a3678e17fb5503c5d69b2506c47 355 SUPERFAMILY SSF53774 30 345 3.27E-99 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 NA29_RS11900 7f827a3678e17fb5503c5d69b2506c47 355 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 22 352 4.2E-114 T 09-03-2017 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 NA29_RS11900 7f827a3678e17fb5503c5d69b2506c47 355 SMART SM00870 31 347 1.4E-134 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 NA29_RS11900 7f827a3678e17fb5503c5d69b2506c47 355 PIRSF PIRSF001220 26 354 5.5E-95 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 NA29_RS11900 7f827a3678e17fb5503c5d69b2506c47 355 Pfam PF00710 Asparaginase, N-terminal 31 221 5.4E-60 T 09-03-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 NA29_RS11900 7f827a3678e17fb5503c5d69b2506c47 355 Gene3D G3DSA:3.40.50.1170 27 219 1.7E-68 T 09-03-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 NA29_RS11900 7f827a3678e17fb5503c5d69b2506c47 355 PIRSF PIRSF500176 28 354 6.9E-85 T 09-03-2017 NA29_RS11900 7f827a3678e17fb5503c5d69b2506c47 355 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 112 122 - T 09-03-2017 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 NA29_RS11900 7f827a3678e17fb5503c5d69b2506c47 355 PRINTS PR00139 Asparaginase/glutaminase family signature 32 43 3.1E-23 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 NA29_RS11900 7f827a3678e17fb5503c5d69b2506c47 355 PRINTS PR00139 Asparaginase/glutaminase family signature 111 129 3.1E-23 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 NA29_RS11900 7f827a3678e17fb5503c5d69b2506c47 355 PRINTS PR00139 Asparaginase/glutaminase family signature 287 305 3.1E-23 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 NA29_RS11900 7f827a3678e17fb5503c5d69b2506c47 355 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 34 42 - T 09-03-2017 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 NA29_RS11900 7f827a3678e17fb5503c5d69b2506c47 355 Gene3D G3DSA:3.40.50.40 240 352 1.5E-34 T 09-03-2017 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 NA29_RS01990 9af86cfe13382c242374cdbcdf44df05 673 Gene3D G3DSA:3.40.50.20 1 128 4.3E-49 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS01990 9af86cfe13382c242374cdbcdf44df05 673 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 5.0E-78 T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NA29_RS01990 9af86cfe13382c242374cdbcdf44df05 673 SUPERFAMILY SSF52440 1 113 1.22E-46 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS01990 9af86cfe13382c242374cdbcdf44df05 673 SUPERFAMILY SSF56059 83 348 5.66E-69 T 09-03-2017 NA29_RS01990 9af86cfe13382c242374cdbcdf44df05 673 Gene3D G3DSA:2.40.50.100 601 671 1.5E-23 T 09-03-2017 NA29_RS01990 9af86cfe13382c242374cdbcdf44df05 673 SMART SM00878 336 453 3.6E-62 T 09-03-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 NA29_RS01990 9af86cfe13382c242374cdbcdf44df05 673 Pfam PF02785 Biotin carboxylase C-terminal domain 336 454 5.3E-39 T 09-03-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 NA29_RS01990 9af86cfe13382c242374cdbcdf44df05 673 Pfam PF00364 Biotin-requiring enzyme 606 669 2.8E-16 T 09-03-2017 IPR000089 Biotin/lipoyl attachment NA29_RS01990 9af86cfe13382c242374cdbcdf44df05 673 SUPERFAMILY SSF51230 591 671 7.2E-20 T 09-03-2017 IPR011053 Single hybrid motif NA29_RS01990 9af86cfe13382c242374cdbcdf44df05 673 Gene3D G3DSA:3.30.470.20 204 459 2.0E-106 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS01990 9af86cfe13382c242374cdbcdf44df05 673 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NA29_RS01990 9af86cfe13382c242374cdbcdf44df05 673 Gene3D G3DSA:3.30.1490.20 129 202 1.6E-30 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NA29_RS01990 9af86cfe13382c242374cdbcdf44df05 673 SUPERFAMILY SSF51246 331 459 7.85E-42 T 09-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 NA29_RS01990 9af86cfe13382c242374cdbcdf44df05 673 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NA29_RS01990 9af86cfe13382c242374cdbcdf44df05 673 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 7.4E-43 T 09-03-2017 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 NA29_RS15045 218e56e60e8a9b6e28d81443ae4dff96 770 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 09-03-2017 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15045 218e56e60e8a9b6e28d81443ae4dff96 770 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 84 121 3.9E-16 T 09-03-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15045 218e56e60e8a9b6e28d81443ae4dff96 770 SUPERFAMILY SSF54862 75 211 5.02E-36 T 09-03-2017 NA29_RS15045 218e56e60e8a9b6e28d81443ae4dff96 770 Pfam PF00384 Molybdopterin oxidoreductase 273 623 2.9E-28 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15045 218e56e60e8a9b6e28d81443ae4dff96 770 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 76 6.0E-21 T 09-03-2017 NA29_RS15045 218e56e60e8a9b6e28d81443ae4dff96 770 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 09-03-2017 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15045 218e56e60e8a9b6e28d81443ae4dff96 770 SUPERFAMILY SSF54292 1 74 3.46E-21 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS15045 218e56e60e8a9b6e28d81443ae4dff96 770 Gene3D G3DSA:3.10.20.30 2 56 9.7E-8 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS15045 218e56e60e8a9b6e28d81443ae4dff96 770 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 623 2.9E-206 T 09-03-2017 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15045 218e56e60e8a9b6e28d81443ae4dff96 770 SUPERFAMILY SSF53706 214 648 1.83E-85 T 09-03-2017 NA29_RS15045 218e56e60e8a9b6e28d81443ae4dff96 770 Gene3D G3DSA:3.40.50.740 533 648 1.3E-43 T 09-03-2017 NA29_RS15045 218e56e60e8a9b6e28d81443ae4dff96 770 Gene3D G3DSA:3.40.50.740 494 495 1.3E-43 T 09-03-2017 NA29_RS15045 218e56e60e8a9b6e28d81443ae4dff96 770 Gene3D G3DSA:3.40.50.740 273 412 1.3E-43 T 09-03-2017 NA29_RS15045 218e56e60e8a9b6e28d81443ae4dff96 770 SMART SM00929 83 123 7.4E-20 T 09-03-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15045 218e56e60e8a9b6e28d81443ae4dff96 770 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 09-03-2017 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS02415 1a3220f222dd0c3e53efb4c43e847e61 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 09-03-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site NA29_RS02415 1a3220f222dd0c3e53efb4c43e847e61 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 7.1E-17 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like NA29_RS02415 1a3220f222dd0c3e53efb4c43e847e61 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 7.1E-17 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like NA29_RS02415 1a3220f222dd0c3e53efb4c43e847e61 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 7.1E-17 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like NA29_RS02415 1a3220f222dd0c3e53efb4c43e847e61 89 Pfam PF00381 PTS HPr component phosphorylation site 4 82 7.1E-27 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like NA29_RS02415 1a3220f222dd0c3e53efb4c43e847e61 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 2.3E-33 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like NA29_RS02415 1a3220f222dd0c3e53efb4c43e847e61 89 Gene3D G3DSA:3.30.1340.10 1 87 8.4E-32 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like NA29_RS02415 1a3220f222dd0c3e53efb4c43e847e61 89 SUPERFAMILY SSF55594 1 87 5.89E-30 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like NA29_RS02415 1a3220f222dd0c3e53efb4c43e847e61 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 09-03-2017 IPR002114 Phosphotransferase system, HPr serine phosphorylation site NA29_RS03450 ac5486d02053dbaf42034d8d13ddd0f9 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 223 2.4E-14 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS03450 ac5486d02053dbaf42034d8d13ddd0f9 230 Gene3D G3DSA:1.10.3720.10 16 223 7.8E-36 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS03450 ac5486d02053dbaf42034d8d13ddd0f9 230 SUPERFAMILY SSF161098 22 208 8.63E-35 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS03450 ac5486d02053dbaf42034d8d13ddd0f9 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 22 117 1.9E-22 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NA29_RS16140 ff73bf68c34430700ee2f2993ce541e9 296 Gene3D G3DSA:1.10.10.60 168 225 2.4E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS16140 ff73bf68c34430700ee2f2993ce541e9 296 Pfam PF12852 Cupin 2 157 1.1E-26 T 09-03-2017 IPR032783 AraC-type transcription regulator, ligand-binding domain NA29_RS16140 ff73bf68c34430700ee2f2993ce541e9 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 173 217 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS16140 ff73bf68c34430700ee2f2993ce541e9 296 Pfam PF12833 Helix-turn-helix domain 194 271 6.1E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS16140 ff73bf68c34430700ee2f2993ce541e9 296 Gene3D G3DSA:1.10.10.60 226 273 9.6E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS16140 ff73bf68c34430700ee2f2993ce541e9 296 SUPERFAMILY SSF46689 224 274 7.78E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS16140 ff73bf68c34430700ee2f2993ce541e9 296 SMART SM00342 188 270 1.2E-27 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS16140 ff73bf68c34430700ee2f2993ce541e9 296 SUPERFAMILY SSF46689 171 222 3.71E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS16140 ff73bf68c34430700ee2f2993ce541e9 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 225 266 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 Pfam PF13426 PAS domain 30 129 1.5E-14 T 09-03-2017 IPR000014 PAS domain NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 Pfam PF13426 PAS domain 154 268 7.6E-11 T 09-03-2017 IPR000014 PAS domain NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 SMART SM00091 143 209 7.0E-4 T 09-03-2017 IPR000014 PAS domain NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 SMART SM00091 16 83 0.041 T 09-03-2017 IPR000014 PAS domain NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 SMART SM00267 431 602 6.1E-59 T 09-03-2017 IPR000160 GGDEF domain NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 SUPERFAMILY SSF55073 447 604 4.39E-47 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 SUPERFAMILY SSF55785 151 268 1.77E-16 T 09-03-2017 IPR000014 PAS domain NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 SUPERFAMILY SSF141868 618 866 1.02E-83 T 09-03-2017 IPR001633 EAL domain NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 SUPERFAMILY SSF55781 291 442 1.59E-22 T 09-03-2017 IPR029016 GAF domain-like NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 Pfam PF00563 EAL domain 619 852 7.2E-70 T 09-03-2017 IPR001633 EAL domain NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 270 3.5E-7 T 09-03-2017 IPR000014 PAS domain NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 28 135 6.9E-15 T 09-03-2017 IPR000014 PAS domain NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 Gene3D G3DSA:3.30.450.20 153 268 1.5E-19 T 09-03-2017 NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 Gene3D G3DSA:3.30.450.20 31 130 1.8E-20 T 09-03-2017 NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 PIRSF PIRSF005925 132 874 1.4E-250 T 09-03-2017 NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 SMART SM00052 612 858 2.8E-100 T 09-03-2017 IPR001633 EAL domain NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 SUPERFAMILY SSF55785 30 129 6.28E-22 T 09-03-2017 IPR000014 PAS domain NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 Gene3D G3DSA:3.30.70.270 444 609 2.0E-53 T 09-03-2017 NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 SMART SM00065 288 439 7.8E-4 T 09-03-2017 IPR003018 GAF domain GO:0005515 NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 440 595 1.0E-40 T 09-03-2017 IPR000160 GGDEF domain NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 Pfam PF00990 Diguanylate cyclase, GGDEF domain 442 593 5.1E-45 T 09-03-2017 IPR000160 GGDEF domain NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 Gene3D G3DSA:3.30.450.40 277 440 4.9E-18 T 09-03-2017 IPR029016 GAF domain-like NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 Gene3D G3DSA:3.20.20.450 615 867 2.3E-92 T 09-03-2017 IPR001633 EAL domain NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 SMART SM00086 89 131 6.5E-7 T 09-03-2017 IPR001610 PAC motif NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 SMART SM00086 227 269 0.066 T 09-03-2017 IPR001610 PAC motif NA29_RS09425 231e90110cbf7ef1e80d89936c8ee2c6 878 Pfam PF13185 GAF domain 288 429 2.5E-15 T 09-03-2017 IPR003018 GAF domain GO:0005515 NA29_RS01075 197cfcd40823e80150478edf22e7d53b 301 Gene3D G3DSA:1.10.150.130 1 91 4.5E-22 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal NA29_RS01075 197cfcd40823e80150478edf22e7d53b 301 Pfam PF00589 Phage integrase family 103 283 3.9E-41 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS01075 197cfcd40823e80150478edf22e7d53b 301 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 3 299 6.2E-107 T 09-03-2017 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 NA29_RS01075 197cfcd40823e80150478edf22e7d53b 301 SUPERFAMILY SSF56349 3 291 3.24E-50 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NA29_RS01075 197cfcd40823e80150478edf22e7d53b 301 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 297 56.649 T 09-03-2017 IPR023009 Tyrosine recombinase XerC/XerD NA29_RS01075 197cfcd40823e80150478edf22e7d53b 301 Gene3D G3DSA:1.10.443.10 102 291 7.1E-52 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS01075 197cfcd40823e80150478edf22e7d53b 301 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 2 80 8.6E-17 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 NA29_RS11650 d94382090c0b48b48176d27e056bc0b1 391 Gene3D G3DSA:1.20.1250.20 3 151 3.8E-9 T 09-03-2017 NA29_RS11650 d94382090c0b48b48176d27e056bc0b1 391 Gene3D G3DSA:1.20.1250.20 198 383 6.7E-14 T 09-03-2017 NA29_RS11650 d94382090c0b48b48176d27e056bc0b1 391 SUPERFAMILY SSF103473 2 383 4.71E-34 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS11650 d94382090c0b48b48176d27e056bc0b1 391 Pfam PF07690 Major Facilitator Superfamily 2 341 1.5E-15 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS14950 2989068d0e02d99182da3cef21f80ff0 409 SUPERFAMILY SSF47203 247 403 1.93E-44 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS14950 2989068d0e02d99182da3cef21f80ff0 409 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 231 6.5E-20 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NA29_RS14950 2989068d0e02d99182da3cef21f80ff0 409 Gene3D G3DSA:2.40.110.10 135 238 3.1E-40 T 09-03-2017 NA29_RS14950 2989068d0e02d99182da3cef21f80ff0 409 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 249 397 2.2E-35 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS14950 2989068d0e02d99182da3cef21f80ff0 409 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 132 4.2E-14 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS14950 2989068d0e02d99182da3cef21f80ff0 409 Gene3D G3DSA:1.10.540.10 1 134 1.5E-33 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS14950 2989068d0e02d99182da3cef21f80ff0 409 Gene3D G3DSA:1.20.140.10 239 405 1.4E-48 T 09-03-2017 NA29_RS14950 2989068d0e02d99182da3cef21f80ff0 409 SUPERFAMILY SSF56645 2 262 2.36E-66 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NA29_RS13110 bf295283cec27cb66c49871442249638 244 SUPERFAMILY SSF46894 174 243 4.42E-20 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS13110 bf295283cec27cb66c49871442249638 244 Gene3D G3DSA:3.40.50.2300 173 188 2.1E-27 T 09-03-2017 NA29_RS13110 bf295283cec27cb66c49871442249638 244 Gene3D G3DSA:3.40.50.2300 18 141 2.1E-27 T 09-03-2017 NA29_RS13110 bf295283cec27cb66c49871442249638 244 Pfam PF00196 Bacterial regulatory proteins, luxR family 182 234 4.7E-19 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS13110 bf295283cec27cb66c49871442249638 244 SMART SM00421 180 237 1.0E-23 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS13110 bf295283cec27cb66c49871442249638 244 Pfam PF00072 Response regulator receiver domain 18 126 7.5E-20 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS13110 bf295283cec27cb66c49871442249638 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 213 225 1.9E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS13110 bf295283cec27cb66c49871442249638 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 197 1.9E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS13110 bf295283cec27cb66c49871442249638 244 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 197 213 1.9E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS13110 bf295283cec27cb66c49871442249638 244 Gene3D G3DSA:1.10.10.10 189 242 1.2E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13110 bf295283cec27cb66c49871442249638 244 SMART SM00448 15 129 6.7E-22 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS13110 bf295283cec27cb66c49871442249638 244 ProSitePatterns PS00622 LuxR-type HTH domain signature. 197 224 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS13110 bf295283cec27cb66c49871442249638 244 SUPERFAMILY SSF52172 17 143 1.35E-26 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS03905 c4ae56c1617c5ea530c0e81959a49ba6 476 Pfam PF01266 FAD dependent oxidoreductase 61 422 6.6E-48 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS03905 c4ae56c1617c5ea530c0e81959a49ba6 476 Gene3D G3DSA:3.30.9.10 157 208 3.3E-4 T 09-03-2017 NA29_RS03905 c4ae56c1617c5ea530c0e81959a49ba6 476 Gene3D G3DSA:3.30.9.10 288 377 3.3E-4 T 09-03-2017 NA29_RS03905 c4ae56c1617c5ea530c0e81959a49ba6 476 Gene3D G3DSA:3.50.50.60 383 434 9.7E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03905 c4ae56c1617c5ea530c0e81959a49ba6 476 Gene3D G3DSA:3.50.50.60 51 152 9.7E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03905 c4ae56c1617c5ea530c0e81959a49ba6 476 Gene3D G3DSA:3.50.50.60 209 287 9.7E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03905 c4ae56c1617c5ea530c0e81959a49ba6 476 SUPERFAMILY SSF51905 383 455 5.5E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03905 c4ae56c1617c5ea530c0e81959a49ba6 476 SUPERFAMILY SSF51905 60 288 5.5E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS16410 96aa99c73d04ea11afa8169e0ff334f3 316 Gene3D G3DSA:3.40.190.10 92 177 5.0E-21 T 09-03-2017 NA29_RS16410 96aa99c73d04ea11afa8169e0ff334f3 316 SUPERFAMILY SSF53850 92 296 1.04E-45 T 09-03-2017 NA29_RS16410 96aa99c73d04ea11afa8169e0ff334f3 316 Pfam PF03466 LysR substrate binding domain 90 292 6.9E-48 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS16410 96aa99c73d04ea11afa8169e0ff334f3 316 Gene3D G3DSA:3.40.190.10 178 261 1.7E-23 T 09-03-2017 NA29_RS16410 96aa99c73d04ea11afa8169e0ff334f3 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.3E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16410 96aa99c73d04ea11afa8169e0ff334f3 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.3E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16410 96aa99c73d04ea11afa8169e0ff334f3 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.3E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16410 96aa99c73d04ea11afa8169e0ff334f3 316 Gene3D G3DSA:1.10.10.10 2 80 1.8E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16410 96aa99c73d04ea11afa8169e0ff334f3 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.9E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16410 96aa99c73d04ea11afa8169e0ff334f3 316 SUPERFAMILY SSF46785 3 112 2.49E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08730 4744504674b24e14f120ceb93bce2541 1139 Gene3D G3DSA:1.10.287.130 677 747 4.4E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS08730 4744504674b24e14f120ceb93bce2541 1139 Pfam PF00512 His Kinase A (phospho-acceptor) domain 684 751 2.6E-17 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS08730 4744504674b24e14f120ceb93bce2541 1139 SMART SM00387 798 908 2.9E-30 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS08730 4744504674b24e14f120ceb93bce2541 1139 SUPERFAMILY SSF55874 741 904 4.19E-40 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS08730 4744504674b24e14f120ceb93bce2541 1139 Pfam PF00072 Response regulator receiver domain 932 1042 3.2E-19 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS08730 4744504674b24e14f120ceb93bce2541 1139 Gene3D G3DSA:3.30.565.10 752 905 3.8E-42 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS08730 4744504674b24e14f120ceb93bce2541 1139 SMART SM00388 684 751 1.0E-20 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS08730 4744504674b24e14f120ceb93bce2541 1139 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 799 904 1.9E-22 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS08730 4744504674b24e14f120ceb93bce2541 1139 PRINTS PR00344 Bacterial sensor protein C-terminal signature 868 886 6.3E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS08730 4744504674b24e14f120ceb93bce2541 1139 PRINTS PR00344 Bacterial sensor protein C-terminal signature 834 848 6.3E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS08730 4744504674b24e14f120ceb93bce2541 1139 PRINTS PR00344 Bacterial sensor protein C-terminal signature 852 862 6.3E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS08730 4744504674b24e14f120ceb93bce2541 1139 PRINTS PR00344 Bacterial sensor protein C-terminal signature 892 905 6.3E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS08730 4744504674b24e14f120ceb93bce2541 1139 SUPERFAMILY SSF52172 928 1052 5.83E-31 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS08730 4744504674b24e14f120ceb93bce2541 1139 SUPERFAMILY SSF47384 670 752 1.22E-20 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS08730 4744504674b24e14f120ceb93bce2541 1139 SMART SM00448 930 1042 6.4E-25 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS08730 4744504674b24e14f120ceb93bce2541 1139 Gene3D G3DSA:3.40.50.2300 929 1049 2.3E-29 T 09-03-2017 NA29_RS03775 69d69c08b799d49d2a4824e136ba85d6 270 SUPERFAMILY SSF55781 78 260 6.54E-29 T 09-03-2017 IPR029016 GAF domain-like NA29_RS03775 69d69c08b799d49d2a4824e136ba85d6 270 Gene3D G3DSA:3.30.450.40 85 261 2.1E-39 T 09-03-2017 IPR029016 GAF domain-like NA29_RS03775 69d69c08b799d49d2a4824e136ba85d6 270 Pfam PF01614 Bacterial transcriptional regulator 131 257 3.1E-11 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS03775 69d69c08b799d49d2a4824e136ba85d6 270 Gene3D G3DSA:1.10.10.10 7 80 5.6E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03775 69d69c08b799d49d2a4824e136ba85d6 270 SUPERFAMILY SSF46785 12 85 1.11E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03775 69d69c08b799d49d2a4824e136ba85d6 270 SMART SM00346 12 101 0.0024 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS03775 69d69c08b799d49d2a4824e136ba85d6 270 Pfam PF09339 IclR helix-turn-helix domain 20 64 1.6E-7 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS11665 3c43d090ca332e9f850ba91426923deb 481 Pfam PF00155 Aminotransferase class I and II 152 419 1.0E-21 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS11665 3c43d090ca332e9f850ba91426923deb 481 SUPERFAMILY SSF46785 15 86 8.5E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11665 3c43d090ca332e9f850ba91426923deb 481 SUPERFAMILY SSF53383 80 471 2.95E-81 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS11665 3c43d090ca332e9f850ba91426923deb 481 Gene3D G3DSA:3.40.640.10 151 367 8.7E-56 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS11665 3c43d090ca332e9f850ba91426923deb 481 Gene3D G3DSA:1.10.10.10 15 84 3.1E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11665 3c43d090ca332e9f850ba91426923deb 481 SMART SM00345 24 83 9.1E-12 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS11665 3c43d090ca332e9f850ba91426923deb 481 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 83 5.5E-12 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS07030 59c915a405ad05a7ea50dd931a07ec9a 463 Gene3D G3DSA:1.25.40.10 49 137 9.0E-9 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS07030 59c915a405ad05a7ea50dd931a07ec9a 463 Pfam PF04575 Protein of unknown function (DUF560) 168 452 8.5E-12 T 09-03-2017 IPR007655 Protein of unknown function DUF560 NA29_RS07030 59c915a405ad05a7ea50dd931a07ec9a 463 SUPERFAMILY SSF48452 47 145 7.86E-10 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS18875 a8b8b212e8ac11ede40453af7d7e0275 121 SMART SM00448 2 116 3.1E-30 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS18875 a8b8b212e8ac11ede40453af7d7e0275 121 Gene3D G3DSA:3.40.50.2300 2 119 7.0E-32 T 09-03-2017 NA29_RS18875 a8b8b212e8ac11ede40453af7d7e0275 121 SUPERFAMILY SSF52172 2 120 1.57E-30 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS18875 a8b8b212e8ac11ede40453af7d7e0275 121 Pfam PF00072 Response regulator receiver domain 4 114 1.8E-23 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS20250 c6ade7faa476b00b919fcfaa0bb14593 354 Pfam PF13343 Bacterial extracellular solute-binding protein 109 316 1.6E-24 T 09-03-2017 NA29_RS20250 c6ade7faa476b00b919fcfaa0bb14593 354 SUPERFAMILY SSF53850 39 349 7.5E-46 T 09-03-2017 NA29_RS20250 c6ade7faa476b00b919fcfaa0bb14593 354 Gene3D G3DSA:3.40.190.10 142 277 4.9E-25 T 09-03-2017 NA29_RS20250 c6ade7faa476b00b919fcfaa0bb14593 354 Gene3D G3DSA:3.40.190.10 278 336 3.0E-9 T 09-03-2017 NA29_RS20250 c6ade7faa476b00b919fcfaa0bb14593 354 Gene3D G3DSA:3.40.190.10 49 137 3.0E-9 T 09-03-2017 NA29_RS15355 17c82f4f32d0965e69fc80bd8e80ad4c 175 Gene3D G3DSA:1.10.10.10 1 144 2.3E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15355 17c82f4f32d0965e69fc80bd8e80ad4c 175 SUPERFAMILY SSF46785 2 137 6.59E-35 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15355 17c82f4f32d0965e69fc80bd8e80ad4c 175 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 135 3.6E-43 T 09-03-2017 IPR000944 Transcription regulator Rrf2-type NA29_RS15355 17c82f4f32d0965e69fc80bd8e80ad4c 175 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 139 9.1E-65 T 09-03-2017 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 NA29_RS15355 17c82f4f32d0965e69fc80bd8e80ad4c 175 Pfam PF02082 Transcriptional regulator 1 83 2.8E-27 T 09-03-2017 IPR000944 Transcription regulator Rrf2-type NA29_RS01720 36bb539f7dc20cc75f7b716e3c719e63 266 Pfam PF12872 OST-HTH/LOTUS domain 176 242 2.8E-15 T 09-03-2017 IPR025605 OST-HTH/LOTUS domain NA29_RS01720 36bb539f7dc20cc75f7b716e3c719e63 266 Gene3D G3DSA:3.40.50.1010 13 148 1.3E-27 T 09-03-2017 IPR029060 PIN domain-like NA29_RS01720 36bb539f7dc20cc75f7b716e3c719e63 266 Pfam PF01936 NYN domain 14 146 5.6E-29 T 09-03-2017 IPR021139 NYN domain, limkain-b1-type NA29_RS06360 499d4c8650a2b1e3cfb579d9e09ba405 377 SUPERFAMILY SSF53850 90 191 3.44E-18 T 09-03-2017 NA29_RS06360 499d4c8650a2b1e3cfb579d9e09ba405 377 SUPERFAMILY SSF53850 238 324 1.76E-12 T 09-03-2017 NA29_RS06360 499d4c8650a2b1e3cfb579d9e09ba405 377 SUPERFAMILY SSF46785 6 84 3.02E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06360 499d4c8650a2b1e3cfb579d9e09ba405 377 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.0E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06360 499d4c8650a2b1e3cfb579d9e09ba405 377 Pfam PF03466 LysR substrate binding domain 242 318 1.1E-9 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS06360 499d4c8650a2b1e3cfb579d9e09ba405 377 Pfam PF03466 LysR substrate binding domain 89 189 3.0E-18 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS06360 499d4c8650a2b1e3cfb579d9e09ba405 377 Gene3D G3DSA:1.10.10.10 5 82 3.3E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06360 499d4c8650a2b1e3cfb579d9e09ba405 377 Gene3D G3DSA:3.40.190.10 93 191 3.5E-19 T 09-03-2017 NA29_RS04365 8e0b290135c60b49e800f0ec50fbc1f8 152 Gene3D G3DSA:3.10.20.30 2 73 1.5E-28 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS04365 8e0b290135c60b49e800f0ec50fbc1f8 152 Pfam PF01799 [2Fe-2S] binding domain 72 145 2.0E-26 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS04365 8e0b290135c60b49e800f0ec50fbc1f8 152 Gene3D G3DSA:1.10.150.120 74 150 2.5E-30 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS04365 8e0b290135c60b49e800f0ec50fbc1f8 152 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 62 7.3E-7 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS04365 8e0b290135c60b49e800f0ec50fbc1f8 152 SUPERFAMILY SSF54292 3 77 1.13E-25 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS04365 8e0b290135c60b49e800f0ec50fbc1f8 152 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NA29_RS04365 8e0b290135c60b49e800f0ec50fbc1f8 152 SUPERFAMILY SSF47741 83 150 1.02E-29 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS19105 f24a4b02627b7ae5e5fb57146de1ffc1 177 SUPERFAMILY SSF88874 1 170 1.31E-43 T 09-03-2017 NA29_RS19105 f24a4b02627b7ae5e5fb57146de1ffc1 177 Gene3D G3DSA:3.90.1340.10 1 67 1.3E-28 T 09-03-2017 IPR011083 Phage tail collar domain NA29_RS19105 f24a4b02627b7ae5e5fb57146de1ffc1 177 Pfam PF07484 Phage Tail Collar Domain 6 62 8.9E-25 T 09-03-2017 IPR011083 Phage tail collar domain NA29_RS16095 1892f110365496daffa4da7687b3ca3b 208 SUPERFAMILY SSF50475 6 202 1.42E-47 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS16095 1892f110365496daffa4da7687b3ca3b 208 SMART SM00903 25 179 5.4E-15 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS16095 1892f110365496daffa4da7687b3ca3b 208 Pfam PF01613 Flavin reductase like domain 30 169 3.0E-17 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS16095 1892f110365496daffa4da7687b3ca3b 208 Gene3D G3DSA:2.30.110.10 16 190 1.0E-62 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS18225 4b347fed1493c828894915fe8c8aacce 550 Gene3D G3DSA:3.40.50.970 372 529 8.6E-43 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS18225 4b347fed1493c828894915fe8c8aacce 550 Gene3D G3DSA:3.40.50.1220 190 371 1.1E-30 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS18225 4b347fed1493c828894915fe8c8aacce 550 SUPERFAMILY SSF52467 160 349 2.45E-32 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS18225 4b347fed1493c828894915fe8c8aacce 550 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 385 527 8.7E-29 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NA29_RS18225 4b347fed1493c828894915fe8c8aacce 550 Gene3D G3DSA:3.40.50.970 2 186 1.2E-54 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS18225 4b347fed1493c828894915fe8c8aacce 550 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 324 1.8E-19 T 09-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 NA29_RS18225 4b347fed1493c828894915fe8c8aacce 550 SUPERFAMILY SSF52518 360 529 9.71E-41 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS18225 4b347fed1493c828894915fe8c8aacce 550 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 177 1.2E-45 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 NA29_RS18225 4b347fed1493c828894915fe8c8aacce 550 SUPERFAMILY SSF52518 2 187 2.54E-43 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 Gene3D G3DSA:2.40.30.10 193 293 9.3E-23 T 09-03-2017 NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 Pfam PF03144 Elongation factor Tu domain 2 205 275 4.0E-9 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 Gene3D G3DSA:3.40.50.300 2 192 5.4E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.4E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.4E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.4E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.4E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.4E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 Pfam PF06421 GTP-binding protein LepA C-terminus 491 597 1.0E-48 T 09-03-2017 IPR013842 GTP-binding protein LepA, C-terminal NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 Gene3D G3DSA:3.30.70.240 405 493 1.1E-22 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 Pfam PF00679 Elongation factor G C-terminus 403 487 2.9E-23 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 SUPERFAMILY SSF54980 403 497 1.19E-26 T 09-03-2017 IPR009022 Elongation factor G, III-V domain NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 7.2E-53 T 09-03-2017 NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 SUPERFAMILY SSF50447 165 277 2.87E-27 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 Hamap MF_00071 Elongation factor 4 [lepA]. 1 601 302.963 T 09-03-2017 IPR006297 Elongation factor 4 GO:0005525 NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 SMART SM00838 405 490 0.0041 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 SUPERFAMILY SSF52540 2 201 1.34E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 TIGRFAM TIGR01393 lepA: elongation factor 4 3 599 4.1E-297 T 09-03-2017 IPR006297 Elongation factor 4 GO:0005525 NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 SUPERFAMILY SSF54980 296 374 7.55E-18 T 09-03-2017 IPR009022 Elongation factor G, III-V domain NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 Gene3D G3DSA:3.30.70.870 295 373 1.2E-25 T 09-03-2017 NA29_RS20905 af6f991d176d7c94d1b435bbe77e0b45 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 173 7.7E-18 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 NA29_RS17790 8137619123f02ae00816edf255990723 329 Pfam PF00294 pfkB family carbohydrate kinase 29 318 1.0E-46 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB NA29_RS17790 8137619123f02ae00816edf255990723 329 SUPERFAMILY SSF53613 29 325 1.71E-62 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS17790 8137619123f02ae00816edf255990723 329 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 24 328 4.2E-122 T 09-03-2017 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 NA29_RS17790 8137619123f02ae00816edf255990723 329 Gene3D G3DSA:3.40.1190.20 29 324 4.0E-65 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS10035 4cbd88c2c7488f80fb9198f6b2560051 240 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 237 30.503 T 09-03-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 NA29_RS10035 4cbd88c2c7488f80fb9198f6b2560051 240 SUPERFAMILY SSF53448 5 234 2.04E-52 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS10035 4cbd88c2c7488f80fb9198f6b2560051 240 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 104 111 - T 09-03-2017 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 NA29_RS10035 4cbd88c2c7488f80fb9198f6b2560051 240 Gene3D G3DSA:3.90.550.10 4 234 2.7E-64 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS10035 4cbd88c2c7488f80fb9198f6b2560051 240 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 234 1.3E-65 T 09-03-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 NA29_RS10035 4cbd88c2c7488f80fb9198f6b2560051 240 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 235 2.8E-59 T 09-03-2017 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 NA29_RS14155 e385f8547afc2f8d35461391391d5312 552 Gene3D G3DSA:3.90.79.10 2 87 2.6E-15 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS14155 e385f8547afc2f8d35461391391d5312 552 Gene3D G3DSA:3.90.79.10 132 187 2.6E-15 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS14155 e385f8547afc2f8d35461391391d5312 552 SUPERFAMILY SSF56281 275 535 2.57E-49 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS14155 e385f8547afc2f8d35461391391d5312 552 Gene3D G3DSA:3.60.15.10 273 489 1.2E-48 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS14155 e385f8547afc2f8d35461391391d5312 552 SUPERFAMILY SSF55811 132 193 8.13E-13 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS14155 e385f8547afc2f8d35461391391d5312 552 SUPERFAMILY SSF55811 3 49 8.13E-13 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS14155 e385f8547afc2f8d35461391391d5312 552 SUPERFAMILY SSF55811 76 87 8.13E-13 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS14155 e385f8547afc2f8d35461391391d5312 552 Pfam PF00753 Metallo-beta-lactamase superfamily 296 462 8.3E-20 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS14155 e385f8547afc2f8d35461391391d5312 552 SMART SM00849 296 462 1.0E-32 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS24610 03e563f8c601ea19d922fce0d00033bd 833 TIGRFAM TIGR00595 priA: primosomal protein N' 310 831 4.5E-169 T 09-03-2017 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 NA29_RS24610 03e563f8c601ea19d922fce0d00033bd 833 SMART SM00490 592 689 1.8E-7 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS24610 03e563f8c601ea19d922fce0d00033bd 833 SUPERFAMILY SSF52540 486 540 1.95E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24610 03e563f8c601ea19d922fce0d00033bd 833 SUPERFAMILY SSF52540 603 699 1.95E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24610 03e563f8c601ea19d922fce0d00033bd 833 SUPERFAMILY SSF52540 309 456 1.95E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24610 03e563f8c601ea19d922fce0d00033bd 833 Hamap MF_00983 Probable primosomal protein N' [priA]. 35 833 23.185 T 09-03-2017 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 NA29_RS24610 03e563f8c601ea19d922fce0d00033bd 833 SMART SM00487 267 487 4.6E-15 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain NA29_RS24610 03e563f8c601ea19d922fce0d00033bd 833 Gene3D G3DSA:3.40.50.300 593 735 1.1E-29 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24610 03e563f8c601ea19d922fce0d00033bd 833 Gene3D G3DSA:3.40.50.300 493 528 1.1E-29 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24610 03e563f8c601ea19d922fce0d00033bd 833 Pfam PF00271 Helicase conserved C-terminal domain 596 688 8.8E-7 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS24610 03e563f8c601ea19d922fce0d00033bd 833 Pfam PF00270 DEAD/DEAH box helicase 310 454 1.2E-12 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NA29_RS24610 03e563f8c601ea19d922fce0d00033bd 833 Gene3D G3DSA:3.40.50.300 308 472 1.6E-29 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15580 1a142150c6a3156575cef06a370d7916 376 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 38.229 T 09-03-2017 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 NA29_RS15580 1a142150c6a3156575cef06a370d7916 376 SUPERFAMILY SSF100879 245 353 1.39E-18 T 09-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 NA29_RS15580 1a142150c6a3156575cef06a370d7916 376 Pfam PF11798 IMS family HHH motif 170 201 2.2E-5 T 09-03-2017 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 NA29_RS15580 1a142150c6a3156575cef06a370d7916 376 Gene3D G3DSA:1.10.150.20 170 238 8.7E-25 T 09-03-2017 NA29_RS15580 1a142150c6a3156575cef06a370d7916 376 Gene3D G3DSA:3.30.1490.100 241 354 7.4E-33 T 09-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 NA29_RS15580 1a142150c6a3156575cef06a370d7916 376 Gene3D G3DSA:3.30.70.270 70 168 7.7E-35 T 09-03-2017 NA29_RS15580 1a142150c6a3156575cef06a370d7916 376 Pfam PF11799 impB/mucB/samB family C-terminal domain 239 349 2.6E-8 T 09-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 NA29_RS15580 1a142150c6a3156575cef06a370d7916 376 Pfam PF00817 impB/mucB/samB family 11 158 1.1E-53 T 09-03-2017 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 NA29_RS15580 1a142150c6a3156575cef06a370d7916 376 SUPERFAMILY SSF56672 4 238 2.13E-92 T 09-03-2017 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 SUPERFAMILY SSF56784 504 749 1.38E-36 T 09-03-2017 IPR023214 HAD-like domain NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 SUPERFAMILY SSF56784 378 398 1.38E-36 T 09-03-2017 IPR023214 HAD-like domain NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 Gene3D G3DSA:1.20.1110.10 619 908 7.1E-64 T 09-03-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 Gene3D G3DSA:1.20.1110.10 86 147 7.1E-64 T 09-03-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 Pfam PF00702 haloacid dehalogenase-like hydrolase 376 664 4.0E-23 T 09-03-2017 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 Pfam PF00689 Cation transporting ATPase, C-terminus 735 907 7.6E-13 T 09-03-2017 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 PRINTS PR01836 Magnesium-transporting ATPase signature 708 723 2.1E-75 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 PRINTS PR01836 Magnesium-transporting ATPase signature 820 841 2.1E-75 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 PRINTS PR01836 Magnesium-transporting ATPase signature 310 329 2.1E-75 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 PRINTS PR01836 Magnesium-transporting ATPase signature 726 737 2.1E-75 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 PRINTS PR01836 Magnesium-transporting ATPase signature 870 891 2.1E-75 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 PRINTS PR01836 Magnesium-transporting ATPase signature 293 309 2.1E-75 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 PRINTS PR01836 Magnesium-transporting ATPase signature 778 794 2.1E-75 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 PRINTS PR01836 Magnesium-transporting ATPase signature 758 771 2.1E-75 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 PRINTS PR01836 Magnesium-transporting ATPase signature 414 427 2.1E-75 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 Pfam PF00122 E1-E2 ATPase 120 371 3.8E-53 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 Pfam PF00690 Cation transporter/ATPase, N-terminus 36 101 1.7E-13 T 09-03-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 SUPERFAMILY SSF81665 699 914 1.7E-97 T 09-03-2017 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 SUPERFAMILY SSF81665 281 374 1.7E-97 T 09-03-2017 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 SUPERFAMILY SSF81665 36 153 1.7E-97 T 09-03-2017 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 SMART SM00831 33 106 8.8E-16 T 09-03-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 Gene3D G3DSA:2.70.150.10 148 280 4.0E-35 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 Gene3D G3DSA:2.70.150.10 51 85 4.0E-35 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 Gene3D G3DSA:3.40.1110.10 372 557 4.7E-32 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 SUPERFAMILY SSF81653 167 279 6.41E-26 T 09-03-2017 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 34 916 0.0 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 278 404 9.3E-20 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 617 738 9.3E-28 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 NA29_RS16160 7f5a4e358064ec636ec86717b59fac0b 917 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 382 388 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 NA29_RS19380 64d7b1f9b19f19de8fabcbed8609eed3 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 190 202 4.3E-9 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS19380 64d7b1f9b19f19de8fabcbed8609eed3 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 100 110 4.3E-9 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS19380 64d7b1f9b19f19de8fabcbed8609eed3 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 162 173 4.3E-9 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS19380 64d7b1f9b19f19de8fabcbed8609eed3 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 328 345 4.3E-9 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS19380 64d7b1f9b19f19de8fabcbed8609eed3 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 56 67 4.3E-9 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS19380 64d7b1f9b19f19de8fabcbed8609eed3 386 Pfam PF13609 Gram-negative porin 7 351 4.4E-55 T 09-03-2017 NA29_RS19380 64d7b1f9b19f19de8fabcbed8609eed3 386 SUPERFAMILY SSF56935 21 386 2.18E-94 T 09-03-2017 NA29_RS19380 64d7b1f9b19f19de8fabcbed8609eed3 386 PRINTS PR00184 Neisseria sp. porin signature 325 349 1.4E-7 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS19380 64d7b1f9b19f19de8fabcbed8609eed3 386 PRINTS PR00184 Neisseria sp. porin signature 58 83 1.4E-7 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS19380 64d7b1f9b19f19de8fabcbed8609eed3 386 PRINTS PR00184 Neisseria sp. porin signature 191 208 1.4E-7 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS19380 64d7b1f9b19f19de8fabcbed8609eed3 386 Gene3D G3DSA:2.40.160.10 21 386 1.5E-108 T 09-03-2017 IPR023614 Porin domain NA29_RS18870 ef2daa13562bbdd4ac52b1211bfecf94 153 Pfam PF12802 MarR family 42 100 2.7E-10 T 09-03-2017 NA29_RS18870 ef2daa13562bbdd4ac52b1211bfecf94 153 SUPERFAMILY SSF46785 18 152 1.08E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18870 ef2daa13562bbdd4ac52b1211bfecf94 153 Gene3D G3DSA:1.10.10.10 14 152 1.1E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18870 ef2daa13562bbdd4ac52b1211bfecf94 153 SMART SM00347 37 137 8.9E-19 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS19695 be5b906fb8aec9cfe319e67dfbbcd97b 289 Gene3D G3DSA:3.60.15.10 9 254 5.3E-52 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS19695 be5b906fb8aec9cfe319e67dfbbcd97b 289 SUPERFAMILY SSF56281 11 288 9.61E-51 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS19695 be5b906fb8aec9cfe319e67dfbbcd97b 289 SMART SM00849 17 207 9.3E-27 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS19695 be5b906fb8aec9cfe319e67dfbbcd97b 289 Pfam PF00753 Metallo-beta-lactamase superfamily 17 207 1.9E-19 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS16665 e766b831f58f5d1a79f434953a2479da 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 196 4.8E-5 T 09-03-2017 NA29_RS16665 e766b831f58f5d1a79f434953a2479da 255 Gene3D G3DSA:3.40.50.720 2 251 9.4E-72 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16665 e766b831f58f5d1a79f434953a2479da 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.1E-26 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16665 e766b831f58f5d1a79f434953a2479da 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-26 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16665 e766b831f58f5d1a79f434953a2479da 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.1E-26 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16665 e766b831f58f5d1a79f434953a2479da 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.1E-26 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16665 e766b831f58f5d1a79f434953a2479da 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.1E-26 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16665 e766b831f58f5d1a79f434953a2479da 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.1E-26 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16665 e766b831f58f5d1a79f434953a2479da 255 Pfam PF00106 short chain dehydrogenase 7 203 3.9E-47 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16665 e766b831f58f5d1a79f434953a2479da 255 SUPERFAMILY SSF51735 3 251 7.43E-65 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16665 e766b831f58f5d1a79f434953a2479da 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS16665 e766b831f58f5d1a79f434953a2479da 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 2.2E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16665 e766b831f58f5d1a79f434953a2479da 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.2E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16665 e766b831f58f5d1a79f434953a2479da 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 2.2E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10155 5c979e15e0a267182d9745a30db2c01a 503 Gene3D G3DSA:1.20.1250.20 13 195 4.4E-30 T 09-03-2017 NA29_RS10155 5c979e15e0a267182d9745a30db2c01a 503 Pfam PF07690 Major Facilitator Superfamily 15 407 4.3E-52 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS10155 5c979e15e0a267182d9745a30db2c01a 503 SUPERFAMILY SSF103473 248 420 5.36E-61 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS10155 5c979e15e0a267182d9745a30db2c01a 503 SUPERFAMILY SSF103473 11 202 5.36E-61 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS10155 5c979e15e0a267182d9745a30db2c01a 503 SUPERFAMILY SSF103473 479 498 5.36E-61 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS10155 5c979e15e0a267182d9745a30db2c01a 503 PRINTS PR01035 Tetracycline resistance protein signature 18 34 8.4E-6 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NA29_RS10155 5c979e15e0a267182d9745a30db2c01a 503 PRINTS PR01035 Tetracycline resistance protein signature 138 160 8.4E-6 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NA29_RS10155 5c979e15e0a267182d9745a30db2c01a 503 Gene3D G3DSA:1.20.1250.20 257 421 2.2E-14 T 09-03-2017 NA29_RS10155 5c979e15e0a267182d9745a30db2c01a 503 Gene3D G3DSA:1.20.1250.20 480 500 2.2E-14 T 09-03-2017 NA29_RS18800 a96199e8e71fb4fc467efd09c787d4e3 341 Gene3D G3DSA:2.60.120.280 66 201 3.4E-4 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS18800 a96199e8e71fb4fc467efd09c787d4e3 341 SUPERFAMILY SSF51215 61 201 7.85E-7 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS18800 a96199e8e71fb4fc467efd09c787d4e3 341 SUPERFAMILY SSF46689 273 321 1.57E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS18800 a96199e8e71fb4fc467efd09c787d4e3 341 Pfam PF12833 Helix-turn-helix domain 240 318 1.0E-19 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS18800 a96199e8e71fb4fc467efd09c787d4e3 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 317 3.8E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS18800 a96199e8e71fb4fc467efd09c787d4e3 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 286 301 3.8E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS18800 a96199e8e71fb4fc467efd09c787d4e3 341 Gene3D G3DSA:1.10.10.60 274 322 1.3E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS18800 a96199e8e71fb4fc467efd09c787d4e3 341 SMART SM00342 234 317 5.7E-24 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS25355 01ddeeaef7d16d8484c146b622067da6 521 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 25 507 2.2E-157 T 09-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 NA29_RS25355 01ddeeaef7d16d8484c146b622067da6 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 120 140 1.8E-5 T 09-03-2017 NA29_RS25355 01ddeeaef7d16d8484c146b622067da6 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 29 53 1.8E-5 T 09-03-2017 NA29_RS25355 01ddeeaef7d16d8484c146b622067da6 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 150 174 1.8E-5 T 09-03-2017 NA29_RS25355 01ddeeaef7d16d8484c146b622067da6 521 Gene3D G3DSA:1.20.1250.20 27 211 1.2E-31 T 09-03-2017 NA29_RS25355 01ddeeaef7d16d8484c146b622067da6 521 Pfam PF07690 Major Facilitator Superfamily 30 423 5.5E-53 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS25355 01ddeeaef7d16d8484c146b622067da6 521 SUPERFAMILY SSF103473 15 207 1.57E-64 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS25355 01ddeeaef7d16d8484c146b622067da6 521 SUPERFAMILY SSF103473 486 510 1.57E-64 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS25355 01ddeeaef7d16d8484c146b622067da6 521 SUPERFAMILY SSF103473 262 433 1.57E-64 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS25355 01ddeeaef7d16d8484c146b622067da6 521 Gene3D G3DSA:1.20.1250.20 491 513 1.0E-19 T 09-03-2017 NA29_RS25355 01ddeeaef7d16d8484c146b622067da6 521 Gene3D G3DSA:1.20.1250.20 277 438 1.0E-19 T 09-03-2017 NA29_RS07810 29fec40fe43cca13cade4d4ce3318b08 683 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 8 181 8.6E-49 T 09-03-2017 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 NA29_RS07810 29fec40fe43cca13cade4d4ce3318b08 683 Pfam PF01968 Hydantoinase/oxoprolinase 204 494 2.3E-88 T 09-03-2017 IPR002821 Hydantoinase/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 NA29_RS07695 f9ffeb7680576f97b4442d4ddf128760 312 Pfam PF03466 LysR substrate binding domain 90 296 8.6E-40 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS07695 f9ffeb7680576f97b4442d4ddf128760 312 Gene3D G3DSA:3.40.190.10 92 176 9.3E-21 T 09-03-2017 NA29_RS07695 f9ffeb7680576f97b4442d4ddf128760 312 SUPERFAMILY SSF46785 5 112 9.91E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07695 f9ffeb7680576f97b4442d4ddf128760 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 2.0E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS07695 f9ffeb7680576f97b4442d4ddf128760 312 Gene3D G3DSA:1.10.10.10 4 85 6.7E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07695 f9ffeb7680576f97b4442d4ddf128760 312 SUPERFAMILY SSF53850 91 301 2.9E-41 T 09-03-2017 NA29_RS07695 f9ffeb7680576f97b4442d4ddf128760 312 Gene3D G3DSA:3.40.190.10 177 264 2.1E-22 T 09-03-2017 NA29_RS05395 cab5032b3e84faccb6d1ffc98ed892b2 347 SUPERFAMILY SSF56645 22 196 1.09E-13 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NA29_RS05395 cab5032b3e84faccb6d1ffc98ed892b2 347 Gene3D G3DSA:2.40.110.10 110 188 3.5E-9 T 09-03-2017 NA29_RS12805 0805548aaca83e54b98d2b6eb290f60d 551 Pfam PF13692 Glycosyl transferases group 1 347 495 1.8E-21 T 09-03-2017 NA29_RS12805 0805548aaca83e54b98d2b6eb290f60d 551 Pfam PF11997 Domain of unknown function (DUF3492) 2 311 2.8E-93 T 09-03-2017 IPR022622 Domain of unknown function DUF3492 NA29_RS12805 0805548aaca83e54b98d2b6eb290f60d 551 SUPERFAMILY SSF53756 180 240 1.08E-51 T 09-03-2017 NA29_RS12805 0805548aaca83e54b98d2b6eb290f60d 551 SUPERFAMILY SSF53756 268 528 1.08E-51 T 09-03-2017 NA29_RS12805 0805548aaca83e54b98d2b6eb290f60d 551 SUPERFAMILY SSF53756 5 55 1.08E-51 T 09-03-2017 NA29_RS12805 0805548aaca83e54b98d2b6eb290f60d 551 Gene3D G3DSA:3.40.50.2000 313 509 5.5E-23 T 09-03-2017 NA29_RS06080 0820e5c3b5e564ffa94227193f693c5f 1049 Pfam PF13540 Regulator of chromosome condensation (RCC1) repeat 950 978 8.0E-5 T 09-03-2017 NA29_RS06080 0820e5c3b5e564ffa94227193f693c5f 1049 Gene3D G3DSA:2.130.10.30 646 858 3.7E-18 T 09-03-2017 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II NA29_RS06080 0820e5c3b5e564ffa94227193f693c5f 1049 Gene3D G3DSA:2.130.10.30 873 1017 7.2E-18 T 09-03-2017 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II NA29_RS06080 0820e5c3b5e564ffa94227193f693c5f 1049 SUPERFAMILY SSF50985 668 938 3.2E-25 T 09-03-2017 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II NA29_RS02845 d318500f9e61850da12f97c28dc0b054 253 Pfam PF07702 UTRA domain 103 244 1.2E-29 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 NA29_RS02845 d318500f9e61850da12f97c28dc0b054 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 7.9E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS02845 d318500f9e61850da12f97c28dc0b054 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 7.9E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS02845 d318500f9e61850da12f97c28dc0b054 253 SMART SM00866 100 245 1.2E-27 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 NA29_RS02845 d318500f9e61850da12f97c28dc0b054 253 Gene3D G3DSA:1.10.10.10 10 74 3.6E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS02845 d318500f9e61850da12f97c28dc0b054 253 Gene3D G3DSA:3.40.1410.10 75 248 1.6E-37 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain NA29_RS02845 d318500f9e61850da12f97c28dc0b054 253 SUPERFAMILY SSF46785 9 87 2.44E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS02845 d318500f9e61850da12f97c28dc0b054 253 SUPERFAMILY SSF64288 67 248 4.71E-36 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain NA29_RS02845 d318500f9e61850da12f97c28dc0b054 253 SMART SM00345 17 79 7.4E-16 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS02845 d318500f9e61850da12f97c28dc0b054 253 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 6 248 1.3E-70 T 09-03-2017 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF NA29_RS02845 d318500f9e61850da12f97c28dc0b054 253 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 79 4.4E-16 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS12380 e50415a1213f84c9b2eaaa61538eeb96 766 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 766 0.0 T 09-03-2017 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 NA29_RS12380 e50415a1213f84c9b2eaaa61538eeb96 766 SUPERFAMILY SSF51726 404 766 7.33E-118 T 09-03-2017 NA29_RS12380 e50415a1213f84c9b2eaaa61538eeb96 766 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 440 761 1.5E-154 T 09-03-2017 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 NA29_RS12380 e50415a1213f84c9b2eaaa61538eeb96 766 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 766 37.479 T 09-03-2017 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 NA29_RS12380 e50415a1213f84c9b2eaaa61538eeb96 766 PIRSF PIRSF000382 1 766 0.0 T 09-03-2017 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 NA29_RS12380 e50415a1213f84c9b2eaaa61538eeb96 766 Gene3D G3DSA:3.20.20.210 3 398 1.8E-153 T 09-03-2017 NA29_RS12380 e50415a1213f84c9b2eaaa61538eeb96 766 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 322 5.1E-113 T 09-03-2017 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 NA29_RS12380 e50415a1213f84c9b2eaaa61538eeb96 766 Gene3D G3DSA:3.20.20.210 400 765 2.1E-130 T 09-03-2017 NA29_RS12380 e50415a1213f84c9b2eaaa61538eeb96 766 SUPERFAMILY SSF51726 4 402 5.23E-113 T 09-03-2017 NA29_RS00755 efbabe78cc86d1bbc22543efc3efb214 246 PIRSF PIRSF006293 6 244 4.2E-72 T 09-03-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 NA29_RS00755 efbabe78cc86d1bbc22543efc3efb214 246 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 10 226 1.5E-62 T 09-03-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 NA29_RS00755 efbabe78cc86d1bbc22543efc3efb214 246 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 8 239 51.199 T 09-03-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 NA29_RS00755 efbabe78cc86d1bbc22543efc3efb214 246 Gene3D G3DSA:3.40.50.620 8 241 1.6E-75 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS00755 efbabe78cc86d1bbc22543efc3efb214 246 SUPERFAMILY SSF52402 9 239 1.12E-55 T 09-03-2017 NA29_RS00755 efbabe78cc86d1bbc22543efc3efb214 246 Pfam PF06508 Queuosine biosynthesis protein QueC 10 233 9.4E-73 T 09-03-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 NA29_RS22470 ce057e2bfc5f2f85556c4ada4860b0a5 467 Gene3D G3DSA:3.90.190.20 314 455 7.5E-44 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS22470 ce057e2bfc5f2f85556c4ada4860b0a5 467 SUPERFAMILY SSF53623 102 311 9.42E-46 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS22470 ce057e2bfc5f2f85556c4ada4860b0a5 467 Pfam PF01225 Mur ligase family, catalytic domain 28 97 2.8E-9 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 NA29_RS22470 ce057e2bfc5f2f85556c4ada4860b0a5 467 Pfam PF08245 Mur ligase middle domain 107 294 5.1E-40 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS22470 ce057e2bfc5f2f85556c4ada4860b0a5 467 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 453 3.8E-124 T 09-03-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS22470 ce057e2bfc5f2f85556c4ada4860b0a5 467 SUPERFAMILY SSF63418 10 99 8.11E-24 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 NA29_RS22470 ce057e2bfc5f2f85556c4ada4860b0a5 467 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 397 4.4E-14 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS22470 ce057e2bfc5f2f85556c4ada4860b0a5 467 Gene3D G3DSA:3.40.1390.10 12 91 1.1E-23 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 NA29_RS22470 ce057e2bfc5f2f85556c4ada4860b0a5 467 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 5 454 32.346 T 09-03-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS22470 ce057e2bfc5f2f85556c4ada4860b0a5 467 SUPERFAMILY SSF53244 314 453 1.17E-35 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS22470 ce057e2bfc5f2f85556c4ada4860b0a5 467 Gene3D G3DSA:3.40.1190.10 92 311 1.0E-61 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS13545 08426205620c2da4a2b7cc6eb6af28db 87 SUPERFAMILY SSF51182 17 74 5.94E-12 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS13545 08426205620c2da4a2b7cc6eb6af28db 87 Pfam PF07883 Cupin domain 27 72 1.6E-7 T 09-03-2017 IPR013096 Cupin 2, conserved barrel NA29_RS13545 08426205620c2da4a2b7cc6eb6af28db 87 Gene3D G3DSA:2.60.120.10 10 72 3.7E-11 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS02510 f18f90ee4c5e9d6be621e349c6789eec 322 SUPERFAMILY SSF51971 1 184 2.83E-24 T 09-03-2017 NA29_RS02510 f18f90ee4c5e9d6be621e349c6789eec 322 SUPERFAMILY SSF51971 262 315 2.83E-24 T 09-03-2017 NA29_RS02510 f18f90ee4c5e9d6be621e349c6789eec 322 Pfam PF01266 FAD dependent oxidoreductase 8 312 2.0E-30 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS02510 f18f90ee4c5e9d6be621e349c6789eec 322 SUPERFAMILY SSF54373 214 276 1.57E-8 T 09-03-2017 NA29_RS02510 f18f90ee4c5e9d6be621e349c6789eec 322 Gene3D G3DSA:3.40.50.720 128 180 5.0E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS02510 f18f90ee4c5e9d6be621e349c6789eec 322 Gene3D G3DSA:3.40.50.720 271 317 5.0E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS02510 f18f90ee4c5e9d6be621e349c6789eec 322 Gene3D G3DSA:3.40.50.720 7 81 5.0E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS02510 f18f90ee4c5e9d6be621e349c6789eec 322 ProSitePatterns PS00677 D-amino acid oxidases signature. 290 308 - T 09-03-2017 IPR006181 D-amino acid oxidase, conserved site GO:0003884|GO:0055114 Reactome: R-HSA-389661 NA29_RS02510 f18f90ee4c5e9d6be621e349c6789eec 322 Gene3D G3DSA:3.30.9.10 181 270 2.8E-21 T 09-03-2017 NA29_RS02510 f18f90ee4c5e9d6be621e349c6789eec 322 Gene3D G3DSA:3.30.9.10 87 117 2.8E-21 T 09-03-2017 NA29_RS12565 639cbbd19b01acb59c9e4f9d6736e323 370 Pfam PF03060 Nitronate monooxygenase 12 357 1.3E-71 T 09-03-2017 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 NA29_RS12565 639cbbd19b01acb59c9e4f9d6736e323 370 Gene3D G3DSA:3.20.20.70 117 351 4.5E-66 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS12565 639cbbd19b01acb59c9e4f9d6736e323 370 Gene3D G3DSA:3.20.20.70 4 85 4.5E-66 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS12565 639cbbd19b01acb59c9e4f9d6736e323 370 SUPERFAMILY SSF51412 109 364 5.19E-60 T 09-03-2017 NA29_RS12565 639cbbd19b01acb59c9e4f9d6736e323 370 SUPERFAMILY SSF51412 4 79 5.19E-60 T 09-03-2017 NA29_RS20170 d4bd9a32584e35c1fab0145b0c21c73a 236 Gene3D G3DSA:3.40.50.2300 2 122 2.9E-16 T 09-03-2017 NA29_RS20170 d4bd9a32584e35c1fab0145b0c21c73a 236 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 7.3E-9 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS20170 d4bd9a32584e35c1fab0145b0c21c73a 236 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 7.3E-9 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS20170 d4bd9a32584e35c1fab0145b0c21c73a 236 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 7.3E-9 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS20170 d4bd9a32584e35c1fab0145b0c21c73a 236 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 200 2.4E-17 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS20170 d4bd9a32584e35c1fab0145b0c21c73a 236 SUPERFAMILY SSF46894 131 205 1.22E-17 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS20170 d4bd9a32584e35c1fab0145b0c21c73a 236 SUPERFAMILY SSF52172 1 134 3.7E-15 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS20170 d4bd9a32584e35c1fab0145b0c21c73a 236 Gene3D G3DSA:1.10.10.10 123 206 7.6E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20170 d4bd9a32584e35c1fab0145b0c21c73a 236 SMART SM00421 143 200 6.4E-16 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS20170 d4bd9a32584e35c1fab0145b0c21c73a 236 SMART SM00448 4 119 1.8E-4 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS20170 d4bd9a32584e35c1fab0145b0c21c73a 236 Pfam PF00072 Response regulator receiver domain 6 119 4.4E-11 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS08555 4fb06b0f6d2eb069c26260003acb54ed 301 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 81 270 9.4E-40 T 09-03-2017 IPR008090 Ferric iron reductase NA29_RS08555 4fb06b0f6d2eb069c26260003acb54ed 301 Pfam PF06276 Ferric iron reductase FhuF-like transporter 86 236 2.3E-19 T 09-03-2017 IPR022770 Ferric iron reductase FhuF domain NA29_RS08555 4fb06b0f6d2eb069c26260003acb54ed 301 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 252 279 1.3E-5 T 09-03-2017 IPR024726 Ferric iron reductase, C-terminal GO:0051537 NA29_RS06715 3f68771e2a8ed97822e711becbc75261 427 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 360 383 1.2E-18 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS06715 3f68771e2a8ed97822e711becbc75261 427 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 151 1.2E-18 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS06715 3f68771e2a8ed97822e711becbc75261 427 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 216 227 1.2E-18 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS06715 3f68771e2a8ed97822e711becbc75261 427 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 345 354 1.2E-18 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS06715 3f68771e2a8ed97822e711becbc75261 427 Gene3D G3DSA:3.40.50.1370 224 382 2.9E-43 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS06715 3f68771e2a8ed97822e711becbc75261 427 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 132 139 - T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS06715 3f68771e2a8ed97822e711becbc75261 427 SUPERFAMILY SSF53671 87 396 6.81E-87 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS06715 3f68771e2a8ed97822e711becbc75261 427 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 240 393 8.4E-26 T 09-03-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 NA29_RS06715 3f68771e2a8ed97822e711becbc75261 427 PRINTS PR00101 Aspartate carbamoyltransferase signature 376 390 4.2E-29 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS06715 3f68771e2a8ed97822e711becbc75261 427 PRINTS PR00101 Aspartate carbamoyltransferase signature 215 232 4.2E-29 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS06715 3f68771e2a8ed97822e711becbc75261 427 PRINTS PR00101 Aspartate carbamoyltransferase signature 310 319 4.2E-29 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS06715 3f68771e2a8ed97822e711becbc75261 427 PRINTS PR00101 Aspartate carbamoyltransferase signature 161 170 4.2E-29 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS06715 3f68771e2a8ed97822e711becbc75261 427 PRINTS PR00101 Aspartate carbamoyltransferase signature 122 144 4.2E-29 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS06715 3f68771e2a8ed97822e711becbc75261 427 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 88 395 2.1E-88 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS06715 3f68771e2a8ed97822e711becbc75261 427 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 88 227 1.4E-38 T 09-03-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 NA29_RS06715 3f68771e2a8ed97822e711becbc75261 427 Gene3D G3DSA:3.40.50.1370 87 223 1.9E-48 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS11990 1b7f2fd1b0c4650f4f1c8ba50f05032e 244 SMART SM00419 184 232 3.4E-12 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NA29_RS11990 1b7f2fd1b0c4650f4f1c8ba50f05032e 244 Gene3D G3DSA:1.10.10.10 168 241 4.2E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11990 1b7f2fd1b0c4650f4f1c8ba50f05032e 244 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 206 221 9.4E-9 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NA29_RS11990 1b7f2fd1b0c4650f4f1c8ba50f05032e 244 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 190 206 9.4E-9 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NA29_RS11990 1b7f2fd1b0c4650f4f1c8ba50f05032e 244 SUPERFAMILY SSF51206 20 159 5.11E-29 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like NA29_RS11990 1b7f2fd1b0c4650f4f1c8ba50f05032e 244 Gene3D G3DSA:2.60.120.10 17 167 1.0E-22 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS11990 1b7f2fd1b0c4650f4f1c8ba50f05032e 244 SUPERFAMILY SSF46785 164 240 1.76E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11990 1b7f2fd1b0c4650f4f1c8ba50f05032e 244 Pfam PF00027 Cyclic nucleotide-binding domain 46 130 4.9E-15 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain NA29_RS11990 1b7f2fd1b0c4650f4f1c8ba50f05032e 244 Pfam PF13545 Crp-like helix-turn-helix domain 165 238 5.0E-16 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NA29_RS11990 1b7f2fd1b0c4650f4f1c8ba50f05032e 244 SMART SM00100 27 145 7.3E-17 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain NA29_RS19660 9e1e1932cde030a3d1a8a06c256ea40c 425 SUPERFAMILY SSF55874 285 417 1.57E-28 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS19660 9e1e1932cde030a3d1a8a06c256ea40c 425 Pfam PF00512 His Kinase A (phospho-acceptor) domain 217 270 1.1E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS19660 9e1e1932cde030a3d1a8a06c256ea40c 425 SMART SM00388 216 274 6.6E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS19660 9e1e1932cde030a3d1a8a06c256ea40c 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 398 1.8E-7 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS19660 9e1e1932cde030a3d1a8a06c256ea40c 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 417 1.8E-7 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS19660 9e1e1932cde030a3d1a8a06c256ea40c 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 374 1.8E-7 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS19660 9e1e1932cde030a3d1a8a06c256ea40c 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 360 1.8E-7 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS19660 9e1e1932cde030a3d1a8a06c256ea40c 425 Pfam PF00672 HAMP domain 147 211 4.0E-12 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS19660 9e1e1932cde030a3d1a8a06c256ea40c 425 SMART SM00304 163 215 4.9E-8 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS19660 9e1e1932cde030a3d1a8a06c256ea40c 425 Gene3D G3DSA:3.30.565.10 261 418 8.8E-28 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS19660 9e1e1932cde030a3d1a8a06c256ea40c 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 315 418 1.9E-16 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS19660 9e1e1932cde030a3d1a8a06c256ea40c 425 Gene3D G3DSA:1.10.287.130 206 260 1.7E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS19660 9e1e1932cde030a3d1a8a06c256ea40c 425 SMART SM00387 311 420 3.7E-22 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS19660 9e1e1932cde030a3d1a8a06c256ea40c 425 SUPERFAMILY SSF47384 199 270 5.69E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS24395 72b968ff84456e43774e585db16b788f 377 SUPERFAMILY SSF51735 7 356 4.72E-84 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS24395 72b968ff84456e43774e585db16b788f 377 Pfam PF16363 GDP-mannose 4,6 dehydratase 10 350 1.5E-157 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS24395 72b968ff84456e43774e585db16b788f 377 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 7 357 1.4E-175 T 09-03-2017 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 NA29_RS24395 72b968ff84456e43774e585db16b788f 377 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 7 360 55.569 T 09-03-2017 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 NA29_RS24395 72b968ff84456e43774e585db16b788f 377 Gene3D G3DSA:3.40.50.720 2 195 2.4E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS24395 72b968ff84456e43774e585db16b788f 377 Gene3D G3DSA:3.90.25.10 308 366 5.2E-51 T 09-03-2017 NA29_RS24395 72b968ff84456e43774e585db16b788f 377 Gene3D G3DSA:3.90.25.10 197 251 5.2E-51 T 09-03-2017 NA29_RS02300 14f2ba3b3c901101047f1982ac23dc1b 237 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 29 207 6.7E-52 T 09-03-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 NA29_RS02300 14f2ba3b3c901101047f1982ac23dc1b 237 PIRSF PIRSF016262 1 227 3.2E-56 T 09-03-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 NA29_RS02300 14f2ba3b3c901101047f1982ac23dc1b 237 Gene3D G3DSA:3.90.1550.10 5 212 9.8E-64 T 09-03-2017 NA29_RS02300 14f2ba3b3c901101047f1982ac23dc1b 237 Hamap MF_00013 Octanoyltransferase [lipB]. 4 215 35.46 T 09-03-2017 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 NA29_RS02300 14f2ba3b3c901101047f1982ac23dc1b 237 Pfam PF03099 Biotin/lipoate A/B protein ligase family 60 168 1.7E-7 T 09-03-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 NA29_RS02300 14f2ba3b3c901101047f1982ac23dc1b 237 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 09-03-2017 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 NA29_RS02300 14f2ba3b3c901101047f1982ac23dc1b 237 SUPERFAMILY SSF55681 4 213 5.55E-62 T 09-03-2017 NA29_RS02300 14f2ba3b3c901101047f1982ac23dc1b 237 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 2.0E-15 T 09-03-2017 NA29_RS15615 02f49e0cc7de1de463b382b5c744e2b4 301 Gene3D G3DSA:3.40.190.10 94 178 4.4E-19 T 09-03-2017 NA29_RS15615 02f49e0cc7de1de463b382b5c744e2b4 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 4.1E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS15615 02f49e0cc7de1de463b382b5c744e2b4 301 Pfam PF03466 LysR substrate binding domain 93 297 4.3E-31 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS15615 02f49e0cc7de1de463b382b5c744e2b4 301 Gene3D G3DSA:3.40.190.10 179 271 2.1E-15 T 09-03-2017 NA29_RS15615 02f49e0cc7de1de463b382b5c744e2b4 301 SUPERFAMILY SSF46785 5 115 3.4E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15615 02f49e0cc7de1de463b382b5c744e2b4 301 SUPERFAMILY SSF53850 91 300 8.95E-37 T 09-03-2017 NA29_RS15615 02f49e0cc7de1de463b382b5c744e2b4 301 Gene3D G3DSA:1.10.10.10 6 90 1.3E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06500 f850fb037db1a83a898490cf9f396b86 310 SUPERFAMILY SSF46785 13 93 1.48E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06500 f850fb037db1a83a898490cf9f396b86 310 Gene3D G3DSA:3.40.190.10 99 183 1.9E-4 T 09-03-2017 NA29_RS06500 f850fb037db1a83a898490cf9f396b86 310 Pfam PF03466 LysR substrate binding domain 96 299 3.9E-46 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS06500 f850fb037db1a83a898490cf9f396b86 310 SUPERFAMILY SSF53850 98 302 2.71E-47 T 09-03-2017 NA29_RS06500 f850fb037db1a83a898490cf9f396b86 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 2.3E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06500 f850fb037db1a83a898490cf9f396b86 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 2.3E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06500 f850fb037db1a83a898490cf9f396b86 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 2.3E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06500 f850fb037db1a83a898490cf9f396b86 310 Gene3D G3DSA:3.40.190.10 184 267 2.9E-25 T 09-03-2017 NA29_RS06500 f850fb037db1a83a898490cf9f396b86 310 Gene3D G3DSA:1.10.10.10 14 93 4.2E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06500 f850fb037db1a83a898490cf9f396b86 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 71 5.5E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS07100 eb7bdf8240b2ae9791870ebf7091c3b8 633 Pfam PF13193 AMP-binding enzyme C-terminal domain 513 596 6.5E-23 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS07100 eb7bdf8240b2ae9791870ebf7091c3b8 633 ProSitePatterns PS00455 Putative AMP-binding domain signature. 240 251 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS07100 eb7bdf8240b2ae9791870ebf7091c3b8 633 Pfam PF00501 AMP-binding enzyme 73 504 3.8E-82 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS07100 eb7bdf8240b2ae9791870ebf7091c3b8 633 SUPERFAMILY SSF56801 13 620 3.53E-157 T 09-03-2017 NA29_RS07100 eb7bdf8240b2ae9791870ebf7091c3b8 633 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 3 630 0.0 T 09-03-2017 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747 NA29_RS07100 eb7bdf8240b2ae9791870ebf7091c3b8 633 Gene3D G3DSA:3.40.50.980 57 244 4.6E-35 T 09-03-2017 NA29_RS07100 eb7bdf8240b2ae9791870ebf7091c3b8 633 Gene3D G3DSA:2.30.38.10 416 498 2.6E-6 T 09-03-2017 NA29_RS07100 eb7bdf8240b2ae9791870ebf7091c3b8 633 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 60 3.0E-19 T 09-03-2017 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 NA29_RS07100 eb7bdf8240b2ae9791870ebf7091c3b8 633 Gene3D G3DSA:3.40.50.980 245 396 3.0E-28 T 09-03-2017 NA29_RS07100 eb7bdf8240b2ae9791870ebf7091c3b8 633 Gene3D G3DSA:3.30.300.30 499 613 1.0E-24 T 09-03-2017 NA29_RS09890 783a1e05e95a02a794c9db1029641e5a 630 Pfam PF02705 K+ potassium transporter 19 551 4.3E-211 T 09-03-2017 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 NA29_RS09890 783a1e05e95a02a794c9db1029641e5a 630 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 10 630 34.711 T 09-03-2017 IPR023051 Potassium uptake protein, low affinity, Kup NA29_RS05910 0621bbcd0482847635fa9056f13a8adc 426 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 97 117 1.3E-5 T 09-03-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NA29_RS05910 0621bbcd0482847635fa9056f13a8adc 426 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 369 384 1.3E-5 T 09-03-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NA29_RS05910 0621bbcd0482847635fa9056f13a8adc 426 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 85 329 1.3E-17 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NA29_RS05910 0621bbcd0482847635fa9056f13a8adc 426 Gene3D G3DSA:2.40.50.100 87 119 1.0E-15 T 09-03-2017 NA29_RS05910 0621bbcd0482847635fa9056f13a8adc 426 Gene3D G3DSA:2.40.50.100 250 283 1.0E-15 T 09-03-2017 NA29_RS05910 0621bbcd0482847635fa9056f13a8adc 426 Pfam PF00529 HlyD membrane-fusion protein of T1SS 66 378 3.2E-11 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NA29_RS05910 0621bbcd0482847635fa9056f13a8adc 426 SUPERFAMILY SSF111369 203 332 8.24E-11 T 09-03-2017 NA29_RS05910 0621bbcd0482847635fa9056f13a8adc 426 SUPERFAMILY SSF111369 86 171 7.72E-12 T 09-03-2017 NA29_RS21280 7c5861c17e72f9c4ccde30e0da1bea84 412 Gene3D G3DSA:3.30.70.270 246 408 3.6E-57 T 09-03-2017 NA29_RS21280 7c5861c17e72f9c4ccde30e0da1bea84 412 Pfam PF00672 HAMP domain 160 226 3.3E-6 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS21280 7c5861c17e72f9c4ccde30e0da1bea84 412 Pfam PF17152 Periplasmic sensor domain 41 141 7.8E-27 T 09-03-2017 IPR033417 Periplasmic sensor domain CHASE8 NA29_RS21280 7c5861c17e72f9c4ccde30e0da1bea84 412 Pfam PF00990 Diguanylate cyclase, GGDEF domain 245 401 4.8E-49 T 09-03-2017 IPR000160 GGDEF domain NA29_RS21280 7c5861c17e72f9c4ccde30e0da1bea84 412 SMART SM00304 179 232 0.0034 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS21280 7c5861c17e72f9c4ccde30e0da1bea84 412 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 241 406 6.2E-45 T 09-03-2017 IPR000160 GGDEF domain NA29_RS21280 7c5861c17e72f9c4ccde30e0da1bea84 412 SUPERFAMILY SSF55073 250 408 2.2E-48 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS21280 7c5861c17e72f9c4ccde30e0da1bea84 412 SMART SM00267 234 407 1.7E-66 T 09-03-2017 IPR000160 GGDEF domain NA29_RS02680 d1684f70006961b99aee10a776bb4051 205 Gene3D G3DSA:2.170.120.20 96 193 4.6E-27 T 09-03-2017 IPR020057 Ribosomal protein L25, beta domain NA29_RS02680 d1684f70006961b99aee10a776bb4051 205 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 93 1.0E-42 T 09-03-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 NA29_RS02680 d1684f70006961b99aee10a776bb4051 205 SUPERFAMILY SSF50715 2 193 2.27E-52 T 09-03-2017 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 NA29_RS02680 d1684f70006961b99aee10a776bb4051 205 Pfam PF01386 Ribosomal L25p family 5 90 7.4E-23 T 09-03-2017 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 NA29_RS02680 d1684f70006961b99aee10a776bb4051 205 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 1 184 30.21 T 09-03-2017 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 NA29_RS02680 d1684f70006961b99aee10a776bb4051 205 Gene3D G3DSA:2.40.240.10 2 93 3.2E-31 T 09-03-2017 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 NA29_RS02680 d1684f70006961b99aee10a776bb4051 205 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 98 186 3.0E-27 T 09-03-2017 IPR020057 Ribosomal protein L25, beta domain NA29_RS02680 d1684f70006961b99aee10a776bb4051 205 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 172 9.3E-40 T 09-03-2017 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 NA29_RS03520 ff6d1eb198795f340b3c9914a0a4f29a 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 299 316 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS03520 ff6d1eb198795f340b3c9914a0a4f29a 446 Pfam PF07690 Major Facilitator Superfamily 27 379 1.1E-27 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS03520 ff6d1eb198795f340b3c9914a0a4f29a 446 Gene3D G3DSA:1.20.1250.20 22 227 7.4E-25 T 09-03-2017 NA29_RS03520 ff6d1eb198795f340b3c9914a0a4f29a 446 Gene3D G3DSA:1.20.1250.20 243 426 1.7E-19 T 09-03-2017 NA29_RS03520 ff6d1eb198795f340b3c9914a0a4f29a 446 SUPERFAMILY SSF103473 21 428 3.4E-64 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS03520 ff6d1eb198795f340b3c9914a0a4f29a 446 ProSitePatterns PS00217 Sugar transport proteins signature 2. 131 156 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS03520 ff6d1eb198795f340b3c9914a0a4f29a 446 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 28 418 7.7E-135 T 09-03-2017 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 NA29_RS03520 ff6d1eb198795f340b3c9914a0a4f29a 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 81 97 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 Gene3D G3DSA:1.10.40.30 382 439 1.7E-32 T 09-03-2017 NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 ProSitePatterns PS00163 Fumarate lyases signature. 283 292 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 TIGRFAM TIGR00838 argH: argininosuccinate lyase 12 463 1.7E-187 T 09-03-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 Gene3D G3DSA:1.20.200.10 115 381 1.1E-108 T 09-03-2017 NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 SUPERFAMILY SSF48557 12 463 4.4E-151 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 Pfam PF14698 Argininosuccinate lyase C-terminal 371 439 8.6E-27 T 09-03-2017 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 PRINTS PR00145 Argininosuccinate lyase family signature 109 131 2.3E-68 T 09-03-2017 NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 PRINTS PR00145 Argininosuccinate lyase family signature 150 170 2.3E-68 T 09-03-2017 NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 PRINTS PR00145 Argininosuccinate lyase family signature 239 263 2.3E-68 T 09-03-2017 NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 PRINTS PR00145 Argininosuccinate lyase family signature 201 217 2.3E-68 T 09-03-2017 NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 PRINTS PR00145 Argininosuccinate lyase family signature 283 299 2.3E-68 T 09-03-2017 NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 PRINTS PR00145 Argininosuccinate lyase family signature 318 337 2.3E-68 T 09-03-2017 NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 Hamap MF_00006 Argininosuccinate lyase [argH]. 10 461 43.431 T 09-03-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 PRINTS PR00149 Fumarate lyase superfamily signature 239 266 1.6E-29 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 PRINTS PR00149 Fumarate lyase superfamily signature 283 299 1.6E-29 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 PRINTS PR00149 Fumarate lyase superfamily signature 155 173 1.6E-29 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 PRINTS PR00149 Fumarate lyase superfamily signature 110 128 1.6E-29 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 Pfam PF00206 Lyase 15 308 1.5E-73 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal NA29_RS17570 3e2bb72f3cef88f26af2832b3edabee1 465 Gene3D G3DSA:1.10.275.10 11 114 5.0E-37 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal NA29_RS12165 ae1a21facfca5e130bc35f0349c18f9d 193 SUPERFAMILY SSF46689 5 72 3.28E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS12165 ae1a21facfca5e130bc35f0349c18f9d 193 Gene3D G3DSA:1.10.10.60 1 49 2.3E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS12165 ae1a21facfca5e130bc35f0349c18f9d 193 SUPERFAMILY SSF48498 78 183 1.26E-13 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS12165 ae1a21facfca5e130bc35f0349c18f9d 193 Gene3D G3DSA:1.10.357.10 50 184 2.2E-28 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS15435 2a5382d0b1341df6c9aecce21d50bbba 398 TIGRFAM TIGR00843 benE: benzoate transporter 16 393 1.2E-131 T 09-03-2017 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 NA29_RS15435 2a5382d0b1341df6c9aecce21d50bbba 398 Pfam PF03594 Benzoate membrane transport protein 16 391 6.2E-158 T 09-03-2017 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 NA29_RS12600 e79265903f2fddea3a64536b73ccfbd2 408 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 27 43 1.5E-8 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS12600 e79265903f2fddea3a64536b73ccfbd2 408 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 68 86 1.5E-8 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS12600 e79265903f2fddea3a64536b73ccfbd2 408 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 286 299 1.5E-8 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS12600 e79265903f2fddea3a64536b73ccfbd2 408 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 1.5E-8 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS12600 e79265903f2fddea3a64536b73ccfbd2 408 Gene3D G3DSA:3.40.50.2300 155 300 1.0E-7 T 09-03-2017 NA29_RS12600 e79265903f2fddea3a64536b73ccfbd2 408 Pfam PF13458 Periplasmic binding protein 26 371 1.5E-71 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS12600 e79265903f2fddea3a64536b73ccfbd2 408 Gene3D G3DSA:3.40.50.2300 301 365 2.6E-50 T 09-03-2017 NA29_RS12600 e79265903f2fddea3a64536b73ccfbd2 408 Gene3D G3DSA:3.40.50.2300 22 154 2.6E-50 T 09-03-2017 NA29_RS12600 e79265903f2fddea3a64536b73ccfbd2 408 SUPERFAMILY SSF53822 26 389 1.78E-87 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS09090 08076cbf178825b996fa9ebdf64e921b 338 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 328 44.818 T 09-03-2017 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 NA29_RS09090 08076cbf178825b996fa9ebdf64e921b 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 2.5E-132 T 09-03-2017 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 NA29_RS09090 08076cbf178825b996fa9ebdf64e921b 338 SUPERFAMILY SSF48179 183 332 3.91E-71 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS09090 08076cbf178825b996fa9ebdf64e921b 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 4.2E-73 T 09-03-2017 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 NA29_RS09090 08076cbf178825b996fa9ebdf64e921b 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 1.1E-65 T 09-03-2017 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 NA29_RS09090 08076cbf178825b996fa9ebdf64e921b 338 Gene3D G3DSA:1.10.1040.10 29 325 4.5E-115 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS09090 08076cbf178825b996fa9ebdf64e921b 338 SUPERFAMILY SSF51735 1 182 7.37E-74 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS08550 b33a09a67de9bbc130576f25105ca120 244 SMART SM00824 Thioesterase 1 227 3.6E-4 T 09-03-2017 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 NA29_RS08550 b33a09a67de9bbc130576f25105ca120 244 Gene3D G3DSA:3.40.50.1820 6 230 7.1E-28 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS08550 b33a09a67de9bbc130576f25105ca120 244 SUPERFAMILY SSF53474 7 225 2.2E-38 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS08550 b33a09a67de9bbc130576f25105ca120 244 Pfam PF00975 Thioesterase domain 6 218 1.3E-38 T 09-03-2017 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 NA29_RS06980 2f29e29f6ad7238f5fac7ffc1cc6572d 505 SUPERFAMILY SSF46785 11 94 5.35E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06980 2f29e29f6ad7238f5fac7ffc1cc6572d 505 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 70 1.3E-11 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS06980 2f29e29f6ad7238f5fac7ffc1cc6572d 505 Gene3D G3DSA:3.40.640.10 172 388 8.3E-53 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS06980 2f29e29f6ad7238f5fac7ffc1cc6572d 505 SUPERFAMILY SSF53383 115 496 2.45E-82 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS06980 2f29e29f6ad7238f5fac7ffc1cc6572d 505 SMART SM00345 20 78 7.8E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS06980 2f29e29f6ad7238f5fac7ffc1cc6572d 505 Gene3D G3DSA:1.10.10.10 13 82 6.6E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06980 2f29e29f6ad7238f5fac7ffc1cc6572d 505 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 1.4E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS06980 2f29e29f6ad7238f5fac7ffc1cc6572d 505 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 1.4E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS06980 2f29e29f6ad7238f5fac7ffc1cc6572d 505 Pfam PF00155 Aminotransferase class I and II 159 437 2.8E-21 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS02885 4a45a92fd52685bf31f79f7b3b2d3168 456 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 6 414 7.3E-69 T 09-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 NA29_RS02885 4a45a92fd52685bf31f79f7b3b2d3168 456 Pfam PF07690 Major Facilitator Superfamily 7 184 1.3E-38 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS02885 4a45a92fd52685bf31f79f7b3b2d3168 456 Pfam PF07690 Major Facilitator Superfamily 265 439 3.1E-11 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS02885 4a45a92fd52685bf31f79f7b3b2d3168 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 127 151 1.1E-5 T 09-03-2017 NA29_RS02885 4a45a92fd52685bf31f79f7b3b2d3168 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 6 30 1.1E-5 T 09-03-2017 NA29_RS02885 4a45a92fd52685bf31f79f7b3b2d3168 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 97 117 1.1E-5 T 09-03-2017 NA29_RS02885 4a45a92fd52685bf31f79f7b3b2d3168 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 192 210 1.1E-5 T 09-03-2017 NA29_RS02885 4a45a92fd52685bf31f79f7b3b2d3168 456 Gene3D G3DSA:1.20.1250.20 254 448 4.5E-16 T 09-03-2017 NA29_RS02885 4a45a92fd52685bf31f79f7b3b2d3168 456 Gene3D G3DSA:1.20.1250.20 5 179 5.3E-31 T 09-03-2017 NA29_RS02885 4a45a92fd52685bf31f79f7b3b2d3168 456 SUPERFAMILY SSF103473 238 446 4.19E-61 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS02885 4a45a92fd52685bf31f79f7b3b2d3168 456 SUPERFAMILY SSF103473 5 192 4.19E-61 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS25410 1455f5c010806fcef77cd69b01b968ec 157 Pfam PF00825 Ribonuclease P 15 122 1.8E-22 T 09-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 NA29_RS25410 1455f5c010806fcef77cd69b01b968ec 157 Gene3D G3DSA:3.30.230.10 14 123 2.1E-23 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NA29_RS25410 1455f5c010806fcef77cd69b01b968ec 157 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 23 103 3.0E-19 T 09-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 NA29_RS25410 1455f5c010806fcef77cd69b01b968ec 157 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 15 150 15.561 T 09-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 NA29_RS25410 1455f5c010806fcef77cd69b01b968ec 157 SUPERFAMILY SSF54211 15 122 1.47E-20 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS25410 1455f5c010806fcef77cd69b01b968ec 157 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 20 126 4.0E-14 T 09-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 NA29_RS25410 1455f5c010806fcef77cd69b01b968ec 157 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 75 89 - T 09-03-2017 IPR020539 Ribonuclease P, conserved site GO:0004526 NA29_RS20530 e1e1e68d8f1a4ea0a5b62dfc9b19e73c 122 Pfam PF00034 Cytochrome c 24 122 6.0E-11 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS20530 e1e1e68d8f1a4ea0a5b62dfc9b19e73c 122 SUPERFAMILY SSF46626 20 122 1.26E-30 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS20530 e1e1e68d8f1a4ea0a5b62dfc9b19e73c 122 Gene3D G3DSA:1.10.760.10 20 121 5.4E-35 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS20530 e1e1e68d8f1a4ea0a5b62dfc9b19e73c 122 PRINTS PR00604 Class IA and IB cytochrome C signature 76 92 2.1E-17 T 09-03-2017 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS20530 e1e1e68d8f1a4ea0a5b62dfc9b19e73c 122 PRINTS PR00604 Class IA and IB cytochrome C signature 112 120 2.1E-17 T 09-03-2017 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS20530 e1e1e68d8f1a4ea0a5b62dfc9b19e73c 122 PRINTS PR00604 Class IA and IB cytochrome C signature 33 40 2.1E-17 T 09-03-2017 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS20530 e1e1e68d8f1a4ea0a5b62dfc9b19e73c 122 PRINTS PR00604 Class IA and IB cytochrome C signature 95 105 2.1E-17 T 09-03-2017 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS20530 e1e1e68d8f1a4ea0a5b62dfc9b19e73c 122 PRINTS PR00604 Class IA and IB cytochrome C signature 46 61 2.1E-17 T 09-03-2017 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS23740 008537df192418427f4a0a287908d772 325 Gene3D G3DSA:3.30.1360.10 176 227 5.9E-7 T 09-03-2017 NA29_RS23740 008537df192418427f4a0a287908d772 325 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 224 3.7E-22 T 09-03-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS23740 008537df192418427f4a0a287908d772 325 SUPERFAMILY SSF47789 248 321 4.58E-27 T 09-03-2017 NA29_RS23740 008537df192418427f4a0a287908d772 325 Gene3D G3DSA:1.10.150.20 244 321 1.6E-36 T 09-03-2017 NA29_RS23740 008537df192418427f4a0a287908d772 325 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 248 305 7.8E-25 T 09-03-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS23740 008537df192418427f4a0a287908d772 325 Gene3D G3DSA:3.30.1360.10 6 63 1.1E-10 T 09-03-2017 NA29_RS23740 008537df192418427f4a0a287908d772 325 Gene3D G3DSA:2.170.120.12 64 173 1.5E-40 T 09-03-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS23740 008537df192418427f4a0a287908d772 325 SUPERFAMILY SSF56553 50 174 4.58E-41 T 09-03-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS23740 008537df192418427f4a0a287908d772 325 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 323 4.0E-35 T 09-03-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS23740 008537df192418427f4a0a287908d772 325 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 61 150 5.3E-24 T 09-03-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS23740 008537df192418427f4a0a287908d772 325 SUPERFAMILY SSF55257 175 228 2.16E-30 T 09-03-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS23740 008537df192418427f4a0a287908d772 325 SUPERFAMILY SSF55257 5 50 2.16E-30 T 09-03-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS23740 008537df192418427f4a0a287908d772 325 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 2 314 35.239 T 09-03-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS23740 008537df192418427f4a0a287908d772 325 SMART SM00662 20 230 1.8E-95 T 09-03-2017 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS23740 008537df192418427f4a0a287908d772 325 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 313 1.0E-106 T 09-03-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS03645 90d5961ba3ea4952869f646f0231e53c 422 SUPERFAMILY SSF54373 273 364 7.85E-11 T 09-03-2017 NA29_RS03645 90d5961ba3ea4952869f646f0231e53c 422 Gene3D G3DSA:3.50.50.60 111 133 3.6E-49 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03645 90d5961ba3ea4952869f646f0231e53c 422 Gene3D G3DSA:3.50.50.60 5 61 3.6E-49 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03645 90d5961ba3ea4952869f646f0231e53c 422 Gene3D G3DSA:3.50.50.60 188 269 3.6E-49 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03645 90d5961ba3ea4952869f646f0231e53c 422 Gene3D G3DSA:3.50.50.60 364 421 3.6E-49 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03645 90d5961ba3ea4952869f646f0231e53c 422 SUPERFAMILY SSF51905 7 65 2.07E-43 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03645 90d5961ba3ea4952869f646f0231e53c 422 SUPERFAMILY SSF51905 364 421 2.07E-43 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03645 90d5961ba3ea4952869f646f0231e53c 422 SUPERFAMILY SSF51905 118 270 2.07E-43 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03645 90d5961ba3ea4952869f646f0231e53c 422 Pfam PF01266 FAD dependent oxidoreductase 7 401 2.8E-48 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS23615 4a2deb87ca7117766460c41e1ae8f8de 1551 SUPERFAMILY SSF69336 1258 1540 1.31E-93 T 09-03-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 NA29_RS23615 4a2deb87ca7117766460c41e1ae8f8de 1551 Gene3D G3DSA:3.20.20.70 853 1243 6.5E-180 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS23615 4a2deb87ca7117766460c41e1ae8f8de 1551 Pfam PF04898 Glutamate synthase central domain 465 751 2.8E-110 T 09-03-2017 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 NA29_RS23615 4a2deb87ca7117766460c41e1ae8f8de 1551 Gene3D G3DSA:3.20.20.70 449 802 3.6E-109 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS23615 4a2deb87ca7117766460c41e1ae8f8de 1551 Gene3D G3DSA:3.60.20.10 11 445 6.2E-187 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS23615 4a2deb87ca7117766460c41e1ae8f8de 1551 Gene3D G3DSA:2.160.20.60 1264 1546 4.9E-106 T 09-03-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 NA29_RS23615 4a2deb87ca7117766460c41e1ae8f8de 1551 SUPERFAMILY SSF56235 11 436 2.8E-151 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS23615 4a2deb87ca7117766460c41e1ae8f8de 1551 SUPERFAMILY SSF51395 461 1255 4.03E-262 T 09-03-2017 NA29_RS23615 4a2deb87ca7117766460c41e1ae8f8de 1551 Pfam PF01493 GXGXG motif 1290 1470 7.4E-81 T 09-03-2017 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 NA29_RS23615 4a2deb87ca7117766460c41e1ae8f8de 1551 Pfam PF00310 Glutamine amidotransferases class-II 11 434 8.2E-185 T 09-03-2017 IPR017932 Glutamine amidotransferase type 2 domain NA29_RS23615 4a2deb87ca7117766460c41e1ae8f8de 1551 Pfam PF01645 Conserved region in glutamate synthase 812 1208 1.6E-154 T 09-03-2017 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 NA29_RS02020 28063c3b24a6e2342454325dfd881025 535 Gene3D G3DSA:3.90.226.10 29 272 1.3E-81 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS02020 28063c3b24a6e2342454325dfd881025 535 Gene3D G3DSA:3.90.226.10 280 530 3.5E-95 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS02020 28063c3b24a6e2342454325dfd881025 535 SUPERFAMILY SSF52096 22 269 1.51E-72 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS02020 28063c3b24a6e2342454325dfd881025 535 Pfam PF01039 Carboxyl transferase domain 49 525 2.1E-151 T 09-03-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 NA29_RS02020 28063c3b24a6e2342454325dfd881025 535 SUPERFAMILY SSF52096 237 517 7.9E-89 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS01530 3e922e2e7f8faa739357e20ee0ae6800 404 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 89 330 7.9E-46 T 09-03-2017 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA Reactome: R-HSA-6799198 NA29_RS01530 3e922e2e7f8faa739357e20ee0ae6800 404 SUPERFAMILY SSF53335 28 385 6.52E-85 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS02700 8691a8ffb64269adadd3e4814d5101ae 203 Gene3D G3DSA:2.50.20.10 22 203 1.1E-36 T 09-03-2017 NA29_RS02700 8691a8ffb64269adadd3e4814d5101ae 203 Pfam PF03550 Outer membrane lipoprotein LolB 49 203 2.9E-34 T 09-03-2017 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 NA29_RS02700 8691a8ffb64269adadd3e4814d5101ae 203 SUPERFAMILY SSF89392 28 203 5.1E-32 T 09-03-2017 IPR029046 Lipoprotein localisation LolA/LolB/LppX NA29_RS21095 4ff2b205ffff6c9e6a63808b2d783af5 504 Pfam PF01565 FAD binding domain 61 199 1.1E-43 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NA29_RS21095 4ff2b205ffff6c9e6a63808b2d783af5 504 Gene3D G3DSA:1.10.45.10 437 476 3.2E-5 T 09-03-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 NA29_RS21095 4ff2b205ffff6c9e6a63808b2d783af5 504 SUPERFAMILY SSF55103 210 478 5.4E-71 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NA29_RS21095 4ff2b205ffff6c9e6a63808b2d783af5 504 Pfam PF02913 FAD linked oxidases, C-terminal domain 235 475 4.0E-64 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 NA29_RS21095 4ff2b205ffff6c9e6a63808b2d783af5 504 Gene3D G3DSA:3.30.465.10 116 236 2.2E-34 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS21095 4ff2b205ffff6c9e6a63808b2d783af5 504 SUPERFAMILY SSF56176 25 236 1.12E-71 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS21095 4ff2b205ffff6c9e6a63808b2d783af5 504 Gene3D G3DSA:3.30.43.10 16 114 4.5E-28 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NA29_RS22300 98349222bf6e13cec44412b81071eda3 454 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 433 1.5E-172 T 09-03-2017 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 NA29_RS22300 98349222bf6e13cec44412b81071eda3 454 Pfam PF02978 Signal peptide binding domain 332 431 1.2E-32 T 09-03-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 NA29_RS22300 98349222bf6e13cec44412b81071eda3 454 SMART SM00382 103 304 2.1E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS22300 98349222bf6e13cec44412b81071eda3 454 Gene3D G3DSA:3.40.50.300 98 300 2.0E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22300 98349222bf6e13cec44412b81071eda3 454 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 6.1E-18 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 NA29_RS22300 98349222bf6e13cec44412b81071eda3 454 Gene3D G3DSA:1.20.120.140 2 89 5.7E-33 T 09-03-2017 NA29_RS22300 98349222bf6e13cec44412b81071eda3 454 Pfam PF00448 SRP54-type protein, GTPase domain 105 299 2.2E-70 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 NA29_RS22300 98349222bf6e13cec44412b81071eda3 454 SMART SM00962 104 299 2.1E-113 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 NA29_RS22300 98349222bf6e13cec44412b81071eda3 454 SMART SM00963 1 86 1.5E-29 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 NA29_RS22300 98349222bf6e13cec44412b81071eda3 454 Gene3D G3DSA:1.10.260.30 332 435 3.8E-38 T 09-03-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 NA29_RS22300 98349222bf6e13cec44412b81071eda3 454 SUPERFAMILY SSF52540 42 360 2.12E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22300 98349222bf6e13cec44412b81071eda3 454 SUPERFAMILY SSF47446 331 432 2.13E-35 T 09-03-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 NA29_RS22300 98349222bf6e13cec44412b81071eda3 454 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 272 285 - T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 NA29_RS22300 98349222bf6e13cec44412b81071eda3 454 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 443 33.063 T 09-03-2017 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 NA29_RS12940 858855e009a9b07b09f00b160ec6ad9b 268 SMART SM00460 155 218 1.2E-20 T 09-03-2017 IPR002931 Transglutaminase-like NA29_RS12940 858855e009a9b07b09f00b160ec6ad9b 268 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 7.5E-21 T 09-03-2017 IPR013589 Bacterial transglutaminase-like, N-terminal NA29_RS12940 858855e009a9b07b09f00b160ec6ad9b 268 SUPERFAMILY SSF54001 66 261 4.49E-41 T 09-03-2017 NA29_RS12940 858855e009a9b07b09f00b160ec6ad9b 268 Pfam PF01841 Transglutaminase-like superfamily 128 215 7.6E-25 T 09-03-2017 IPR002931 Transglutaminase-like NA29_RS12940 858855e009a9b07b09f00b160ec6ad9b 268 Gene3D G3DSA:3.90.260.10 160 256 1.3E-11 T 09-03-2017 IPR002931 Transglutaminase-like NA29_RS05925 f25436fdca4ee1500fa424442d8ca759 364 SUPERFAMILY SSF56935 31 364 5.72E-73 T 09-03-2017 NA29_RS05925 f25436fdca4ee1500fa424442d8ca759 364 PRINTS PR00184 Neisseria sp. porin signature 313 337 2.0E-5 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS05925 f25436fdca4ee1500fa424442d8ca759 364 PRINTS PR00184 Neisseria sp. porin signature 63 88 2.0E-5 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS05925 f25436fdca4ee1500fa424442d8ca759 364 Pfam PF13609 Gram-negative porin 15 340 3.4E-45 T 09-03-2017 NA29_RS05925 f25436fdca4ee1500fa424442d8ca759 364 Gene3D G3DSA:2.40.160.10 31 364 1.7E-81 T 09-03-2017 IPR023614 Porin domain NA29_RS16855 c614a81806964d3f0f04e77fd4b01e9c 273 SUPERFAMILY SSF51197 57 236 3.64E-12 T 09-03-2017 NA29_RS16855 c614a81806964d3f0f04e77fd4b01e9c 273 Gene3D G3DSA:2.60.120.620 54 167 3.2E-6 T 09-03-2017 NA29_RS16075 71df0f1d0d9ac4d362973bfbc47b8c06 290 Gene3D G3DSA:1.10.3720.10 58 286 2.2E-65 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16075 71df0f1d0d9ac4d362973bfbc47b8c06 290 SUPERFAMILY SSF161098 52 276 7.06E-66 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16075 71df0f1d0d9ac4d362973bfbc47b8c06 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 277 1.3E-24 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS12420 fd37ee9c0746934c8f31744575a46b90 493 Gene3D G3DSA:2.20.200.10 111 156 8.0E-13 T 09-03-2017 NA29_RS12420 fd37ee9c0746934c8f31744575a46b90 493 Gene3D G3DSA:2.20.200.10 328 356 8.0E-13 T 09-03-2017 NA29_RS12420 fd37ee9c0746934c8f31744575a46b90 493 Pfam PF02321 Outer membrane efflux protein 75 269 2.1E-23 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS12420 fd37ee9c0746934c8f31744575a46b90 493 Pfam PF02321 Outer membrane efflux protein 296 475 2.0E-17 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS12420 fd37ee9c0746934c8f31744575a46b90 493 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 21 478 1.7E-118 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NA29_RS12420 fd37ee9c0746934c8f31744575a46b90 493 SUPERFAMILY SSF56954 13 481 4.84E-100 T 09-03-2017 NA29_RS12420 fd37ee9c0746934c8f31744575a46b90 493 Gene3D G3DSA:1.20.1600.10 157 327 3.6E-92 T 09-03-2017 NA29_RS12420 fd37ee9c0746934c8f31744575a46b90 493 Gene3D G3DSA:1.20.1600.10 365 479 3.6E-92 T 09-03-2017 NA29_RS12420 fd37ee9c0746934c8f31744575a46b90 493 Gene3D G3DSA:1.20.1600.10 62 101 3.6E-92 T 09-03-2017 NA29_RS07310 500f8a3b9866654f4d5edcc6917ffec7 264 SUPERFAMILY SSF52540 18 249 8.59E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07310 500f8a3b9866654f4d5edcc6917ffec7 264 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS07310 500f8a3b9866654f4d5edcc6917ffec7 264 SMART SM00382 42 252 2.2E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS07310 500f8a3b9866654f4d5edcc6917ffec7 264 Pfam PF00005 ABC transporter 33 188 5.5E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS07310 500f8a3b9866654f4d5edcc6917ffec7 264 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 18 264 7.3E-119 T 09-03-2017 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 NA29_RS07310 500f8a3b9866654f4d5edcc6917ffec7 264 Gene3D G3DSA:3.40.50.300 11 255 6.7E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17440 cb12784b0ae205cf441abd6099ae64be 776 SUPERFAMILY SSF46785 708 773 2.39E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17440 cb12784b0ae205cf441abd6099ae64be 776 SUPERFAMILY SSF52540 363 668 3.93E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17440 cb12784b0ae205cf441abd6099ae64be 776 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 22 201 1.8E-47 T 09-03-2017 IPR025199 DNA translocase FtsK, 4TM region NA29_RS17440 cb12784b0ae205cf441abd6099ae64be 776 Pfam PF09397 Ftsk gamma domain 710 770 1.3E-26 T 09-03-2017 IPR018541 FtsK gamma domain NA29_RS17440 cb12784b0ae205cf441abd6099ae64be 776 SMART SM00843 708 773 2.6E-38 T 09-03-2017 IPR018541 FtsK gamma domain NA29_RS17440 cb12784b0ae205cf441abd6099ae64be 776 Gene3D G3DSA:3.40.50.300 361 664 8.1E-96 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17440 cb12784b0ae205cf441abd6099ae64be 776 Pfam PF01580 FtsK/SpoIIIE family 389 597 1.2E-63 T 09-03-2017 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 NA29_RS01055 d871e59c2fc55ad9c385353f3874450b 392 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 382 9.2E-184 T 09-03-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 NA29_RS01055 d871e59c2fc55ad9c385353f3874450b 392 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 262 270 - T 09-03-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 NA29_RS01055 d871e59c2fc55ad9c385353f3874450b 392 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 1.2E-40 T 09-03-2017 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 NA29_RS01055 d871e59c2fc55ad9c385353f3874450b 392 PIRSF PIRSF000497 1 387 1.3E-173 T 09-03-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 NA29_RS01055 d871e59c2fc55ad9c385353f3874450b 392 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 236 374 4.0E-69 T 09-03-2017 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 NA29_RS01055 d871e59c2fc55ad9c385353f3874450b 392 SUPERFAMILY SSF55973 4 110 1.06E-45 T 09-03-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 NA29_RS01055 d871e59c2fc55ad9c385353f3874450b 392 Gene3D G3DSA:3.30.300.10 136 236 5.4E-45 T 09-03-2017 NA29_RS01055 d871e59c2fc55ad9c385353f3874450b 392 SUPERFAMILY SSF55973 236 384 3.18E-69 T 09-03-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 NA29_RS01055 d871e59c2fc55ad9c385353f3874450b 392 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 57.021 T 09-03-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 NA29_RS01055 d871e59c2fc55ad9c385353f3874450b 392 Gene3D G3DSA:3.30.300.10 247 383 1.5E-69 T 09-03-2017 NA29_RS01055 d871e59c2fc55ad9c385353f3874450b 392 Gene3D G3DSA:3.30.300.10 12 135 1.5E-46 T 09-03-2017 NA29_RS01055 d871e59c2fc55ad9c385353f3874450b 392 SUPERFAMILY SSF55973 113 235 9.42E-53 T 09-03-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 NA29_RS01055 d871e59c2fc55ad9c385353f3874450b 392 Pfam PF02772 S-adenosylmethionine synthetase, central domain 117 234 4.9E-47 T 09-03-2017 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 NA29_RS01055 d871e59c2fc55ad9c385353f3874450b 392 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 09-03-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 NA29_RS01185 db3983938f5c52f49f06f7a346da543c 222 SUPERFAMILY SSF46785 10 92 1.62E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01185 db3983938f5c52f49f06f7a346da543c 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 65 8.3E-19 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS01185 db3983938f5c52f49f06f7a346da543c 222 Gene3D G3DSA:1.10.10.10 10 66 1.2E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01185 db3983938f5c52f49f06f7a346da543c 222 SMART SM00895 75 212 8.6E-19 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS01185 db3983938f5c52f49f06f7a346da543c 222 Pfam PF07729 FCD domain 76 210 1.4E-17 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS01185 db3983938f5c52f49f06f7a346da543c 222 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 6.0E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS01185 db3983938f5c52f49f06f7a346da543c 222 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 6.0E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS01185 db3983938f5c52f49f06f7a346da543c 222 SMART SM00345 7 65 2.5E-17 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS01185 db3983938f5c52f49f06f7a346da543c 222 SUPERFAMILY SSF48008 71 215 1.8E-18 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS01185 db3983938f5c52f49f06f7a346da543c 222 Gene3D G3DSA:1.20.120.530 69 217 1.5E-18 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS11585 9c8eb3ef2151cbb8bdb68307b7bd2aec 433 Pfam PF00202 Aminotransferase class-III 27 429 4.3E-89 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS11585 9c8eb3ef2151cbb8bdb68307b7bd2aec 433 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 240 277 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS11585 9c8eb3ef2151cbb8bdb68307b7bd2aec 433 SUPERFAMILY SSF53383 9 431 9.74E-119 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS11585 9c8eb3ef2151cbb8bdb68307b7bd2aec 433 Gene3D G3DSA:3.40.640.10 61 312 5.1E-72 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS11585 9c8eb3ef2151cbb8bdb68307b7bd2aec 433 Gene3D G3DSA:3.90.1150.10 313 431 7.0E-36 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS22305 8a5daf0b002d5b17a4b4c277e5b866e8 182 Gene3D G3DSA:3.40.50.2020 12 179 5.8E-49 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS22305 8a5daf0b002d5b17a4b4c277e5b866e8 182 SUPERFAMILY SSF53271 15 180 2.1E-42 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS22305 8a5daf0b002d5b17a4b4c277e5b866e8 182 Pfam PF00156 Phosphoribosyl transferase domain 16 164 1.6E-15 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 NA29_RS11150 c8cd42045f65d66aab281ac70da57ed7 619 Gene3D G3DSA:3.40.50.980 224 389 7.5E-23 T 09-03-2017 NA29_RS11150 c8cd42045f65d66aab281ac70da57ed7 619 ProSitePatterns PS00455 Putative AMP-binding domain signature. 217 228 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS11150 c8cd42045f65d66aab281ac70da57ed7 619 Gene3D G3DSA:3.40.50.980 42 223 5.5E-18 T 09-03-2017 NA29_RS11150 c8cd42045f65d66aab281ac70da57ed7 619 Gene3D G3DSA:2.30.38.10 395 454 7.1E-14 T 09-03-2017 NA29_RS11150 c8cd42045f65d66aab281ac70da57ed7 619 SUPERFAMILY SSF56801 30 555 1.06E-78 T 09-03-2017 NA29_RS11150 c8cd42045f65d66aab281ac70da57ed7 619 Pfam PF00501 AMP-binding enzyme 59 455 1.3E-55 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS20230 5213e3ed0d2c00420a034ffdb0f4ecb4 695 SMART SM00853 508 651 2.0E-53 T 09-03-2017 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 NA29_RS20230 5213e3ed0d2c00420a034ffdb0f4ecb4 695 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 130 136 - T 09-03-2017 IPR014762 DNA mismatch repair, conserved site NA29_RS20230 5213e3ed0d2c00420a034ffdb0f4ecb4 695 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 243 358 2.3E-38 T 09-03-2017 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 NA29_RS20230 5213e3ed0d2c00420a034ffdb0f4ecb4 695 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 61 161 4.3E-10 T 09-03-2017 NA29_RS20230 5213e3ed0d2c00420a034ffdb0f4ecb4 695 SUPERFAMILY SSF54211 224 359 1.02E-36 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS20230 5213e3ed0d2c00420a034ffdb0f4ecb4 695 SMART SM01340 241 359 1.1E-57 T 09-03-2017 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 NA29_RS20230 5213e3ed0d2c00420a034ffdb0f4ecb4 695 Gene3D G3DSA:3.30.230.10 237 358 1.7E-38 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NA29_RS20230 5213e3ed0d2c00420a034ffdb0f4ecb4 695 SUPERFAMILY SSF55874 39 236 6.94E-49 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS20230 5213e3ed0d2c00420a034ffdb0f4ecb4 695 Pfam PF08676 MutL C terminal dimerisation domain 504 651 4.9E-47 T 09-03-2017 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 NA29_RS20230 5213e3ed0d2c00420a034ffdb0f4ecb4 695 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 38 691 28.09 T 09-03-2017 IPR020667 DNA mismatch repair protein, MutL GO:0006298 NA29_RS20230 5213e3ed0d2c00420a034ffdb0f4ecb4 695 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 39 339 3.7E-92 T 09-03-2017 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 NA29_RS20230 5213e3ed0d2c00420a034ffdb0f4ecb4 695 SUPERFAMILY SSF118116 504 693 2.35E-59 T 09-03-2017 NA29_RS20230 5213e3ed0d2c00420a034ffdb0f4ecb4 695 Gene3D G3DSA:3.30.565.10 39 236 2.3E-67 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 368 381 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 Pfam PF13188 PAS domain 214 253 8.5E-6 T 09-03-2017 IPR000014 PAS domain NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 Gene3D G3DSA:1.10.8.60 518 572 1.2E-16 T 09-03-2017 NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 Gene3D G3DSA:3.30.450.20 211 315 1.0E-10 T 09-03-2017 NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 SMART SM00382 364 508 3.0E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 SUPERFAMILY SSF55785 200 315 4.95E-10 T 09-03-2017 IPR000014 PAS domain NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 SUPERFAMILY SSF52540 343 583 1.39E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 Pfam PF06506 Propionate catabolism activator 41 207 2.0E-43 T 09-03-2017 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 Gene3D G3DSA:3.40.50.2300 14 104 2.7E-36 T 09-03-2017 NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 17 660 1.6E-167 T 09-03-2017 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0005737|GO:0019629 NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 561 570 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 Gene3D G3DSA:1.10.10.60 573 660 5.0E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 628 645 8.7E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 645 663 8.7E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 SUPERFAMILY SSF159800 20 204 1.44E-41 T 09-03-2017 NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 431 446 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 SUPERFAMILY SSF46689 617 660 2.22E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 Gene3D G3DSA:3.40.50.300 341 517 8.5E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 Pfam PF02954 Bacterial regulatory protein, Fis family 631 660 4.2E-8 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 Gene3D G3DSA:3.40.50.10660 105 185 3.1E-23 T 09-03-2017 NA29_RS00080 abd8f211a32ab277cf51eeefdc1ae514 663 Pfam PF00158 Sigma-54 interaction domain 344 511 6.6E-67 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NA29_RS22810 308f9f148aa15a11aaa5ba49157998c8 104 PIRSF PIRSF005894 1 104 6.0E-48 T 09-03-2017 IPR014434 Monothiol glutaredoxin NA29_RS22810 308f9f148aa15a11aaa5ba49157998c8 104 Pfam PF00462 Glutaredoxin 16 81 2.8E-17 T 09-03-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 NA29_RS22810 308f9f148aa15a11aaa5ba49157998c8 104 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 3 101 2.8E-46 T 09-03-2017 IPR004480 Monothiol glutaredoxin-related NA29_RS22810 308f9f148aa15a11aaa5ba49157998c8 104 SUPERFAMILY SSF52833 2 102 2.17E-33 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS22810 308f9f148aa15a11aaa5ba49157998c8 104 Gene3D G3DSA:3.40.30.10 6 102 2.3E-34 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS12730 e949c8ed69397403e831474f02ff263a 283 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 38 280 7.0E-67 T 09-03-2017 IPR003786 Protein FdhD GO:0016783 NA29_RS12730 e949c8ed69397403e831474f02ff263a 283 Pfam PF02634 FdhD/NarQ family 42 276 2.2E-74 T 09-03-2017 IPR003786 Protein FdhD GO:0016783 NA29_RS12730 e949c8ed69397403e831474f02ff263a 283 Gene3D G3DSA:3.10.20.10 44 130 1.6E-26 T 09-03-2017 NA29_RS12730 e949c8ed69397403e831474f02ff263a 283 Gene3D G3DSA:3.40.140.10 146 278 2.6E-47 T 09-03-2017 NA29_RS12730 e949c8ed69397403e831474f02ff263a 283 PIRSF PIRSF015626 9 282 7.3E-81 T 09-03-2017 IPR003786 Protein FdhD GO:0016783 NA29_RS12730 e949c8ed69397403e831474f02ff263a 283 SUPERFAMILY SSF53927 23 275 2.29E-78 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 NA29_RS12730 e949c8ed69397403e831474f02ff263a 283 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 22 280 33.084 T 09-03-2017 IPR003786 Protein FdhD GO:0016783 NA29_RS14935 2b95ed8dff54ba81100616901296a90f 259 SUPERFAMILY SSF52096 4 258 1.42E-75 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS14935 2b95ed8dff54ba81100616901296a90f 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 258 7.7E-61 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS14935 2b95ed8dff54ba81100616901296a90f 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 09-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 NA29_RS14935 2b95ed8dff54ba81100616901296a90f 259 Gene3D G3DSA:3.90.226.10 4 258 4.1E-75 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS12405 d32ad8d62de5c89e7864076eb670b32f 373 SUPERFAMILY SSF54909 12 314 3.22E-109 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS12405 d32ad8d62de5c89e7864076eb670b32f 373 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 19 308 1.8E-86 T 09-03-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 NA29_RS12405 d32ad8d62de5c89e7864076eb670b32f 373 Pfam PF04261 Dyp-type peroxidase family 15 308 2.1E-96 T 09-03-2017 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 NA29_RS16930 3908475bf4245fe154b4433122ed174b 417 SUPERFAMILY SSF51905 375 416 8.81E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS16930 3908475bf4245fe154b4433122ed174b 417 SUPERFAMILY SSF51905 2 292 8.81E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS16930 3908475bf4245fe154b4433122ed174b 417 Gene3D G3DSA:3.40.50.720 5 80 1.4E-25 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16930 3908475bf4245fe154b4433122ed174b 417 Gene3D G3DSA:3.40.50.720 189 277 1.4E-25 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16930 3908475bf4245fe154b4433122ed174b 417 Gene3D G3DSA:3.40.50.720 368 414 1.4E-25 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16930 3908475bf4245fe154b4433122ed174b 417 Pfam PF01593 Flavin containing amine oxidoreductase 12 414 2.4E-35 T 09-03-2017 IPR002937 Amine oxidase GO:0016491|GO:0055114 NA29_RS16930 3908475bf4245fe154b4433122ed174b 417 TIGRFAM TIGR03467 HpnE: squalene-associated FAD-dependent desaturase 5 414 1.2E-123 T 09-03-2017 IPR017830 Squalene-associated FAD-dependent desaturase NA29_RS07335 eada621f226b644934401121cbc2333e 513 PIRSF PIRSF001267 1 513 1.0E-190 T 09-03-2017 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 NA29_RS07335 eada621f226b644934401121cbc2333e 513 Gene3D G3DSA:3.30.420.150 136 314 1.3E-50 T 09-03-2017 NA29_RS07335 eada621f226b644934401121cbc2333e 513 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 8 309 1.5E-95 T 09-03-2017 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 NA29_RS07335 eada621f226b644934401121cbc2333e 513 SUPERFAMILY SSF53067 8 133 7.77E-32 T 09-03-2017 NA29_RS07335 eada621f226b644934401121cbc2333e 513 Pfam PF02541 Ppx/GppA phosphatase family 29 310 2.8E-68 T 09-03-2017 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 NA29_RS07335 eada621f226b644934401121cbc2333e 513 SUPERFAMILY SSF53067 136 313 4.36E-39 T 09-03-2017 NA29_RS07335 eada621f226b644934401121cbc2333e 513 Gene3D G3DSA:3.30.420.40 3 131 2.9E-41 T 09-03-2017 NA29_RS07335 eada621f226b644934401121cbc2333e 513 SUPERFAMILY SSF109604 316 511 2.89E-38 T 09-03-2017 NA29_RS12585 c3e53cb47bc81e8e729e4b8fd5ec53a4 240 Pfam PF00005 ABC transporter 17 166 1.4E-24 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS12585 c3e53cb47bc81e8e729e4b8fd5ec53a4 240 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS12585 c3e53cb47bc81e8e729e4b8fd5ec53a4 240 SUPERFAMILY SSF52540 2 236 1.78E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS12585 c3e53cb47bc81e8e729e4b8fd5ec53a4 240 SMART SM00382 26 217 4.3E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS12585 c3e53cb47bc81e8e729e4b8fd5ec53a4 240 Gene3D G3DSA:3.40.50.300 1 235 7.4E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15190 308f8d586dd174c3e202af63b760f32f 311 SUPERFAMILY SSF118352 243 301 1.07E-17 T 09-03-2017 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 NA29_RS15190 308f8d586dd174c3e202af63b760f32f 311 PIRSF PIRSF005261 1 303 2.1E-72 T 09-03-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 NA29_RS15190 308f8d586dd174c3e202af63b760f32f 311 Gene3D G3DSA:1.10.287.480 197 242 5.9E-14 T 09-03-2017 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain NA29_RS15190 308f8d586dd174c3e202af63b760f32f 311 Gene3D G3DSA:3.55.30.10 2 182 2.9E-61 T 09-03-2017 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 NA29_RS15190 308f8d586dd174c3e202af63b760f32f 311 SUPERFAMILY SSF64397 2 250 2.62E-64 T 09-03-2017 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 NA29_RS15190 308f8d586dd174c3e202af63b760f32f 311 Pfam PF01430 Hsp33 protein 3 291 5.4E-84 T 09-03-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 NA29_RS15190 308f8d586dd174c3e202af63b760f32f 311 Gene3D G3DSA:3.90.1280.10 243 301 2.3E-22 T 09-03-2017 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 Gene3D G3DSA:2.40.33.10 74 166 8.0E-28 T 09-03-2017 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 474 5.5E-155 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 SUPERFAMILY SSF50800 71 163 8.02E-25 T 09-03-2017 IPR011037 Pyruvate kinase-like, insert domain NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 472 2.4E-30 T 09-03-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 Gene3D G3DSA:3.20.20.60 167 328 9.6E-94 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 Gene3D G3DSA:3.20.20.60 3 73 9.6E-94 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 Pfam PF00224 Pyruvate kinase, barrel domain 3 340 1.2E-115 T 09-03-2017 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 Gene3D G3DSA:3.40.1380.20 329 474 1.8E-39 T 09-03-2017 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 PRINTS PR01050 Pyruvate kinase family signature 185 199 1.6E-56 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 PRINTS PR01050 Pyruvate kinase family signature 219 245 1.6E-56 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 PRINTS PR01050 Pyruvate kinase family signature 60 76 1.6E-56 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 PRINTS PR01050 Pyruvate kinase family signature 246 270 1.6E-56 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 PRINTS PR01050 Pyruvate kinase family signature 296 314 1.6E-56 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 PRINTS PR01050 Pyruvate kinase family signature 271 295 1.6E-56 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 PRINTS PR01050 Pyruvate kinase family signature 315 331 1.6E-56 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 SUPERFAMILY SSF52935 325 475 1.44E-37 T 09-03-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 SUPERFAMILY SSF51621 166 339 1.99E-90 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS05570 c0047476875eae1289034f634f0c9a33 477 SUPERFAMILY SSF51621 2 76 1.99E-90 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS02390 28e6c90c320440fbd6585d811b74df74 511 SUPERFAMILY SSF111352 78 490 3.53E-123 T 09-03-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 NA29_RS02390 28e6c90c320440fbd6585d811b74df74 511 TIGRFAM TIGR00836 amt: ammonium transporter 81 509 1.4E-131 T 09-03-2017 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 NA29_RS02390 28e6c90c320440fbd6585d811b74df74 511 Gene3D G3DSA:1.10.3430.10 78 490 1.8E-139 T 09-03-2017 IPR029020 Ammonium/urea transporter NA29_RS02390 28e6c90c320440fbd6585d811b74df74 511 ProSitePatterns PS01219 Ammonium transporters signature. 257 282 - T 09-03-2017 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 NA29_RS02390 28e6c90c320440fbd6585d811b74df74 511 Pfam PF00909 Ammonium Transporter Family 83 509 7.1E-119 T 09-03-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 NA29_RS20300 84201df48c6871aae9065a84104363c0 218 Gene3D G3DSA:3.40.50.300 10 205 1.1E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20300 84201df48c6871aae9065a84104363c0 218 Pfam PF01712 Deoxynucleoside kinase 12 204 8.9E-34 T 09-03-2017 IPR031314 Deoxynucleoside kinase domain NA29_RS20300 84201df48c6871aae9065a84104363c0 218 PIRSF PIRSF000705 3 211 8.9E-56 T 09-03-2017 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 NA29_RS20300 84201df48c6871aae9065a84104363c0 218 SUPERFAMILY SSF52540 8 208 5.51E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24340 1ec186c64b7a4cb1fbaa60eb378b503b 441 SUPERFAMILY SSF103473 34 435 4.32E-80 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS24340 1ec186c64b7a4cb1fbaa60eb378b503b 441 Gene3D G3DSA:1.20.1250.20 37 228 2.2E-39 T 09-03-2017 NA29_RS24340 1ec186c64b7a4cb1fbaa60eb378b503b 441 Gene3D G3DSA:1.20.1250.20 253 434 1.7E-22 T 09-03-2017 NA29_RS24340 1ec186c64b7a4cb1fbaa60eb378b503b 441 Pfam PF07690 Major Facilitator Superfamily 46 304 2.6E-35 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS24340 1ec186c64b7a4cb1fbaa60eb378b503b 441 ProSitePatterns PS00217 Sugar transport proteins signature 2. 135 160 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS22090 03a6e65ad8c9de809209ca5587b48983 143 SUPERFAMILY SSF46785 6 133 1.27E-40 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS22090 03a6e65ad8c9de809209ca5587b48983 143 Gene3D G3DSA:1.10.10.10 6 82 1.2E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS22090 03a6e65ad8c9de809209ca5587b48983 143 Pfam PF01475 Ferric uptake regulator family 10 129 1.0E-45 T 09-03-2017 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 NA29_RS03715 8a05e1ae90349aa145d04d28c18d2c76 461 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 NA29_RS03715 8a05e1ae90349aa145d04d28c18d2c76 461 Pfam PF00324 Amino acid permease 19 450 7.0E-114 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 NA29_RS03715 8a05e1ae90349aa145d04d28c18d2c76 461 PIRSF PIRSF006060 1 453 4.9E-68 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NA29_RS08815 43276dd60c570e275ba22b8ad9ba21fc 279 Gene3D G3DSA:3.30.43.10 1 53 4.8E-14 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NA29_RS08815 43276dd60c570e275ba22b8ad9ba21fc 279 Gene3D G3DSA:3.30.390.50 179 276 1.3E-5 T 09-03-2017 NA29_RS08815 43276dd60c570e275ba22b8ad9ba21fc 279 SUPERFAMILY SSF56176 1 173 3.36E-49 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS08815 43276dd60c570e275ba22b8ad9ba21fc 279 SUPERFAMILY SSF55447 179 272 8.95E-6 T 09-03-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal NA29_RS08815 43276dd60c570e275ba22b8ad9ba21fc 279 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 173 1.3E-45 T 09-03-2017 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 NA29_RS08815 43276dd60c570e275ba22b8ad9ba21fc 279 Gene3D G3DSA:3.30.465.10 57 172 2.4E-31 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS07885 9fd841dca624cee8ddeed3c9a5621e88 772 Gene3D G3DSA:3.40.50.300 283 384 5.0E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07885 9fd841dca624cee8ddeed3c9a5621e88 772 Gene3D G3DSA:3.40.50.300 575 666 5.0E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07885 9fd841dca624cee8ddeed3c9a5621e88 772 Gene3D G3DSA:3.40.50.300 185 282 4.0E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07885 9fd841dca624cee8ddeed3c9a5621e88 772 Gene3D G3DSA:3.40.50.300 3 108 4.0E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07885 9fd841dca624cee8ddeed3c9a5621e88 772 Pfam PF13361 UvrD-like helicase C-terminal domain 274 639 2.2E-70 T 09-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 NA29_RS07885 9fd841dca624cee8ddeed3c9a5621e88 772 Gene3D G3DSA:1.10.486.10 385 508 1.1E-44 T 09-03-2017 NA29_RS07885 9fd841dca624cee8ddeed3c9a5621e88 772 Gene3D G3DSA:1.10.486.10 546 564 1.1E-44 T 09-03-2017 NA29_RS07885 9fd841dca624cee8ddeed3c9a5621e88 772 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 268 9.8E-79 T 09-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NA29_RS07885 9fd841dca624cee8ddeed3c9a5621e88 772 SUPERFAMILY SSF52540 1 508 3.84E-177 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07885 9fd841dca624cee8ddeed3c9a5621e88 772 SUPERFAMILY SSF52540 576 664 3.84E-177 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07885 9fd841dca624cee8ddeed3c9a5621e88 772 Gene3D G3DSA:1.10.10.160 112 184 3.7E-22 T 09-03-2017 IPR013986 DExx box DNA helicase domain NA29_RS24015 6425d672675566c1fcd3327a4ccd7e3b 1403 Pfam PF00623 RNA polymerase Rpb1, domain 2 391 485 8.3E-28 T 09-03-2017 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24015 6425d672675566c1fcd3327a4ccd7e3b 1403 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 387 5.8E-8 T 09-03-2017 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24015 6425d672675566c1fcd3327a4ccd7e3b 1403 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 9.4E-87 T 09-03-2017 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24015 6425d672675566c1fcd3327a4ccd7e3b 1403 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1377 10.43 T 09-03-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24015 6425d672675566c1fcd3327a4ccd7e3b 1403 SUPERFAMILY SSF64484 1135 1364 0.0 T 09-03-2017 NA29_RS24015 6425d672675566c1fcd3327a4ccd7e3b 1403 SUPERFAMILY SSF64484 16 945 0.0 T 09-03-2017 NA29_RS24015 6425d672675566c1fcd3327a4ccd7e3b 1403 Pfam PF04998 RNA polymerase Rpb1, domain 5 767 1317 1.9E-77 T 09-03-2017 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24015 6425d672675566c1fcd3327a4ccd7e3b 1403 SMART SM00663 235 514 1.3E-174 T 09-03-2017 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24015 6425d672675566c1fcd3327a4ccd7e3b 1403 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1368 0.0 T 09-03-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24015 6425d672675566c1fcd3327a4ccd7e3b 1403 Pfam PF05000 RNA polymerase Rpb1, domain 4 675 764 6.6E-19 T 09-03-2017 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24015 6425d672675566c1fcd3327a4ccd7e3b 1403 Gene3D G3DSA:2.40.40.20 349 376 2.4E-36 T 09-03-2017 NA29_RS24015 6425d672675566c1fcd3327a4ccd7e3b 1403 Gene3D G3DSA:2.40.40.20 417 489 2.4E-36 T 09-03-2017 NA29_RS24015 6425d672675566c1fcd3327a4ccd7e3b 1403 Gene3D G3DSA:2.40.50.100 1158 1210 1.7E-6 T 09-03-2017 NA29_RS24015 6425d672675566c1fcd3327a4ccd7e3b 1403 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 645 9.5E-23 T 09-03-2017 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS02570 36845a8c5c9c5b9f97accf1e993dfb54 396 Pfam PF02628 Cytochrome oxidase assembly protein 33 345 1.3E-88 T 09-03-2017 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 NA29_RS15395 fb512ce671866260391ef504265b7cd5 214 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 3.0E-18 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 NA29_RS15395 fb512ce671866260391ef504265b7cd5 214 Gene3D G3DSA:1.10.340.30 22 122 1.7E-33 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 NA29_RS15395 fb512ce671866260391ef504265b7cd5 214 Gene3D G3DSA:1.10.1670.10 123 206 1.2E-34 T 09-03-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 NA29_RS15395 fb512ce671866260391ef504265b7cd5 214 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.664 T 09-03-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 NA29_RS15395 fb512ce671866260391ef504265b7cd5 214 SMART SM00478 38 185 2.0E-52 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 NA29_RS15395 fb512ce671866260391ef504265b7cd5 214 Pfam PF00633 Helix-hairpin-helix motif 100 127 6.4E-9 T 09-03-2017 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 NA29_RS15395 fb512ce671866260391ef504265b7cd5 214 PIRSF PIRSF001435 1 210 1.4E-49 T 09-03-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 NA29_RS15395 fb512ce671866260391ef504265b7cd5 214 SUPERFAMILY SSF48150 2 208 2.2E-70 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 NA29_RS15395 fb512ce671866260391ef504265b7cd5 214 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 09-03-2017 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 NA29_RS15395 fb512ce671866260391ef504265b7cd5 214 TIGRFAM TIGR01083 nth: endonuclease III 5 194 4.3E-83 T 09-03-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 NA29_RS23775 7f61a5a510cbe3d6c4e45bc11754e69e 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 09-03-2017 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23775 7f61a5a510cbe3d6c4e45bc11754e69e 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 7.3E-46 T 09-03-2017 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23775 7f61a5a510cbe3d6c4e45bc11754e69e 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 142 3.3E-29 T 09-03-2017 IPR021131 Ribosomal protein L18e/L15P NA29_RS23775 7f61a5a510cbe3d6c4e45bc11754e69e 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 19.46 T 09-03-2017 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 NA29_RS23775 7f61a5a510cbe3d6c4e45bc11754e69e 144 Gene3D G3DSA:3.100.10.10 32 143 8.7E-25 T 09-03-2017 NA29_RS23775 7f61a5a510cbe3d6c4e45bc11754e69e 144 SUPERFAMILY SSF52080 4 142 7.19E-45 T 09-03-2017 IPR021131 Ribosomal protein L18e/L15P NA29_RS18595 810b3e625b24ff7be09a6e62240b0168 302 SUPERFAMILY SSF46785 1 111 1.59E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18595 810b3e625b24ff7be09a6e62240b0168 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.7E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18595 810b3e625b24ff7be09a6e62240b0168 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18595 810b3e625b24ff7be09a6e62240b0168 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18595 810b3e625b24ff7be09a6e62240b0168 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18595 810b3e625b24ff7be09a6e62240b0168 302 Pfam PF03466 LysR substrate binding domain 89 290 3.4E-43 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS18595 810b3e625b24ff7be09a6e62240b0168 302 SUPERFAMILY SSF53850 90 291 8.09E-40 T 09-03-2017 NA29_RS18595 810b3e625b24ff7be09a6e62240b0168 302 Gene3D G3DSA:3.40.190.10 89 173 3.0E-19 T 09-03-2017 NA29_RS18595 810b3e625b24ff7be09a6e62240b0168 302 Gene3D G3DSA:3.40.190.10 174 262 1.6E-26 T 09-03-2017 NA29_RS18595 810b3e625b24ff7be09a6e62240b0168 302 Gene3D G3DSA:1.10.10.10 1 80 1.2E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11055 0f3801fa459bae3309fa572f747d6128 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 452 471 2.4E-6 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS11055 0f3801fa459bae3309fa572f747d6128 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 435 452 2.4E-6 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS11055 0f3801fa459bae3309fa572f747d6128 471 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 377 386 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site NA29_RS11055 0f3801fa459bae3309fa572f747d6128 471 SMART SM00382 185 329 2.6E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS11055 0f3801fa459bae3309fa572f747d6128 471 Gene3D G3DSA:1.10.10.60 426 467 1.4E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS11055 0f3801fa459bae3309fa572f747d6128 471 SUPERFAMILY SSF52540 165 400 9.51E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11055 0f3801fa459bae3309fa572f747d6128 471 Gene3D G3DSA:3.40.50.300 162 337 7.1E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11055 0f3801fa459bae3309fa572f747d6128 471 Pfam PF00072 Response regulator receiver domain 50 126 3.4E-8 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS11055 0f3801fa459bae3309fa572f747d6128 471 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 251 266 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NA29_RS11055 0f3801fa459bae3309fa572f747d6128 471 Pfam PF00158 Sigma-54 interaction domain 165 331 1.5E-65 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NA29_RS11055 0f3801fa459bae3309fa572f747d6128 471 SMART SM00448 15 132 1.9E-5 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS11055 0f3801fa459bae3309fa572f747d6128 471 SUPERFAMILY SSF46689 376 468 3.9E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS11055 0f3801fa459bae3309fa572f747d6128 471 Gene3D G3DSA:1.10.8.60 338 409 1.1E-20 T 09-03-2017 NA29_RS11055 0f3801fa459bae3309fa572f747d6128 471 SUPERFAMILY SSF52172 52 210 1.76E-20 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS11055 0f3801fa459bae3309fa572f747d6128 471 Pfam PF02954 Bacterial regulatory protein, Fis family 429 468 1.3E-10 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS11055 0f3801fa459bae3309fa572f747d6128 471 Gene3D G3DSA:3.40.50.2300 51 135 1.9E-13 T 09-03-2017 NA29_RS25040 3e66b6c349bdfa8aaf1ef27b4e4a712b 286 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 09-03-2017 IPR000540 Flagellar motor protein MotA, conserved site NA29_RS25040 3e66b6c349bdfa8aaf1ef27b4e4a712b 286 Pfam PF01618 MotA/TolQ/ExbB proton channel family 139 238 2.1E-11 T 09-03-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 NA29_RS25040 3e66b6c349bdfa8aaf1ef27b4e4a712b 286 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 282 3.2E-121 T 09-03-2017 IPR022522 Flagellar motor stator, MotA NA29_RS11940 3dcb2fd5bd6e98ac71c4449036a32afe 489 Gene3D G3DSA:1.20.200.10 92 361 1.7E-49 T 09-03-2017 NA29_RS11940 3dcb2fd5bd6e98ac71c4449036a32afe 489 Gene3D G3DSA:1.10.40.30 362 433 1.8E-13 T 09-03-2017 NA29_RS11940 3dcb2fd5bd6e98ac71c4449036a32afe 489 PRINTS PR00145 Argininosuccinate lyase family signature 178 194 7.4E-15 T 09-03-2017 NA29_RS11940 3dcb2fd5bd6e98ac71c4449036a32afe 489 PRINTS PR00145 Argininosuccinate lyase family signature 264 280 7.4E-15 T 09-03-2017 NA29_RS11940 3dcb2fd5bd6e98ac71c4449036a32afe 489 PRINTS PR00145 Argininosuccinate lyase family signature 86 108 7.4E-15 T 09-03-2017 NA29_RS11940 3dcb2fd5bd6e98ac71c4449036a32afe 489 PRINTS PR00145 Argininosuccinate lyase family signature 127 147 7.4E-15 T 09-03-2017 NA29_RS11940 3dcb2fd5bd6e98ac71c4449036a32afe 489 Pfam PF00206 Lyase 85 287 2.2E-27 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal NA29_RS11940 3dcb2fd5bd6e98ac71c4449036a32afe 489 SUPERFAMILY SSF48557 17 456 5.03E-72 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 NA29_RS11940 3dcb2fd5bd6e98ac71c4449036a32afe 489 Pfam PF14698 Argininosuccinate lyase C-terminal 355 432 5.5E-12 T 09-03-2017 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 NA29_RS11940 3dcb2fd5bd6e98ac71c4449036a32afe 489 PRINTS PR00149 Fumarate lyase superfamily signature 218 245 1.1E-7 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS11940 3dcb2fd5bd6e98ac71c4449036a32afe 489 PRINTS PR00149 Fumarate lyase superfamily signature 87 105 1.1E-7 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS11940 3dcb2fd5bd6e98ac71c4449036a32afe 489 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 1.1E-7 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS11940 3dcb2fd5bd6e98ac71c4449036a32afe 489 PRINTS PR00149 Fumarate lyase superfamily signature 264 280 1.1E-7 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS10495 c3d0a2d398b6b4c16633750e4e94e6bd 331 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 4 328 6.8E-84 T 09-03-2017 IPR003770 Uncharacterised protein family UPF0755, YceG-like NA29_RS10495 c3d0a2d398b6b4c16633750e4e94e6bd 331 Pfam PF02618 YceG-like family 39 325 5.1E-84 T 09-03-2017 IPR003770 Uncharacterised protein family UPF0755, YceG-like NA29_RS10495 c3d0a2d398b6b4c16633750e4e94e6bd 331 Gene3D G3DSA:3.30.160.60 298 330 1.8E-17 T 09-03-2017 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 NA29_RS19670 7ebc2f25ef14c2e28fc6dd04e24c5af6 188 SUPERFAMILY SSF55729 1 148 2.78E-33 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS19670 7ebc2f25ef14c2e28fc6dd04e24c5af6 188 Gene3D G3DSA:3.40.630.30 1 179 1.2E-44 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS19670 7ebc2f25ef14c2e28fc6dd04e24c5af6 188 Pfam PF13302 Acetyltransferase (GNAT) domain 5 146 6.9E-29 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS19995 db57559bcb1e78653c234d5d8b017cad 343 SUPERFAMILY SSF63380 101 194 1.34E-26 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS19995 db57559bcb1e78653c234d5d8b017cad 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 204 223 7.4E-19 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS19995 db57559bcb1e78653c234d5d8b017cad 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 129 141 7.4E-19 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS19995 db57559bcb1e78653c234d5d8b017cad 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 306 314 7.4E-19 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS19995 db57559bcb1e78653c234d5d8b017cad 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 229 238 7.4E-19 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS19995 db57559bcb1e78653c234d5d8b017cad 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 188 197 7.4E-19 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS19995 db57559bcb1e78653c234d5d8b017cad 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 145 152 7.4E-19 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS19995 db57559bcb1e78653c234d5d8b017cad 343 Gene3D G3DSA:2.40.30.10 101 194 4.8E-28 T 09-03-2017 NA29_RS19995 db57559bcb1e78653c234d5d8b017cad 343 SUPERFAMILY SSF52343 198 339 1.01E-31 T 09-03-2017 NA29_RS19995 db57559bcb1e78653c234d5d8b017cad 343 Gene3D G3DSA:3.10.20.30 2 95 5.0E-21 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS19995 db57559bcb1e78653c234d5d8b017cad 343 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NA29_RS19995 db57559bcb1e78653c234d5d8b017cad 343 SUPERFAMILY SSF54292 2 98 2.23E-22 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS19995 db57559bcb1e78653c234d5d8b017cad 343 Gene3D G3DSA:3.40.50.80 199 339 3.8E-33 T 09-03-2017 NA29_RS19995 db57559bcb1e78653c234d5d8b017cad 343 Pfam PF00970 Oxidoreductase FAD-binding domain 104 193 1.3E-16 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 NA29_RS19995 db57559bcb1e78653c234d5d8b017cad 343 Pfam PF00175 Oxidoreductase NAD-binding domain 206 319 1.8E-14 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NA29_RS19995 db57559bcb1e78653c234d5d8b017cad 343 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 80 2.6E-13 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS19610 b184ad40b875ac88359331e21b4dffb7 724 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 14 701 43.561 T 09-03-2017 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 NA29_RS19610 b184ad40b875ac88359331e21b4dffb7 724 SUPERFAMILY SSF52540 402 433 1.5E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19610 b184ad40b875ac88359331e21b4dffb7 724 SUPERFAMILY SSF52540 530 704 1.5E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19610 b184ad40b875ac88359331e21b4dffb7 724 SUPERFAMILY SSF52540 316 356 1.5E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19610 b184ad40b875ac88359331e21b4dffb7 724 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 46 703 2.6E-133 T 09-03-2017 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 NA29_RS19610 b184ad40b875ac88359331e21b4dffb7 724 Gene3D G3DSA:3.40.50.300 188 331 2.0E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19610 b184ad40b875ac88359331e21b4dffb7 724 SUPERFAMILY SSF52540 187 351 2.01E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19610 b184ad40b875ac88359331e21b4dffb7 724 SMART SM00382 198 441 0.0055 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS19610 b184ad40b875ac88359331e21b4dffb7 724 Gene3D G3DSA:3.40.50.300 332 345 1.2E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19610 b184ad40b875ac88359331e21b4dffb7 724 Gene3D G3DSA:3.40.50.300 512 560 1.2E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19610 b184ad40b875ac88359331e21b4dffb7 724 Gene3D G3DSA:3.40.50.300 409 435 1.2E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19610 b184ad40b875ac88359331e21b4dffb7 724 Gene3D G3DSA:3.40.50.300 620 690 1.2E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19610 b184ad40b875ac88359331e21b4dffb7 724 Pfam PF13604 AAA domain 189 351 2.6E-31 T 09-03-2017 NA29_RS19610 b184ad40b875ac88359331e21b4dffb7 724 Pfam PF13538 UvrD-like helicase C-terminal domain 632 678 2.3E-15 T 09-03-2017 IPR027785 UvrD-like helicase C-terminal domain NA29_RS17650 bc346b35bffc7d1141c9c5856df0b737 207 PIRSF PIRSF009320 1 194 4.4E-27 T 09-03-2017 NA29_RS17650 bc346b35bffc7d1141c9c5856df0b737 207 SUPERFAMILY SSF52540 1 191 3.84E-34 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17650 bc346b35bffc7d1141c9c5856df0b737 207 Gene3D G3DSA:3.40.50.300 3 205 1.1E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17650 bc346b35bffc7d1141c9c5856df0b737 207 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 152 1.6E-18 T 09-03-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain NA29_RS22875 282a12de0f6e8a7e21fb5b015077174b 117 Gene3D G3DSA:3.10.20.30 12 111 3.2E-22 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS22875 282a12de0f6e8a7e21fb5b015077174b 117 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 19 101 5.8E-10 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS22875 282a12de0f6e8a7e21fb5b015077174b 117 SUPERFAMILY SSF54292 9 111 5.11E-23 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS20235 183a2c928b9f7a8e571d30a7c2dd3137 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 307 29.824 T 09-03-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 NA29_RS20235 183a2c928b9f7a8e571d30a7c2dd3137 315 Pfam PF01715 IPP transferase 41 290 2.3E-87 T 09-03-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 NA29_RS20235 183a2c928b9f7a8e571d30a7c2dd3137 315 SUPERFAMILY SSF52540 7 151 1.08E-19 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20235 183a2c928b9f7a8e571d30a7c2dd3137 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 297 9.4E-95 T 09-03-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 NA29_RS20235 183a2c928b9f7a8e571d30a7c2dd3137 315 Gene3D G3DSA:1.10.287.890 206 288 1.4E-33 T 09-03-2017 NA29_RS20235 183a2c928b9f7a8e571d30a7c2dd3137 315 Gene3D G3DSA:3.40.50.300 4 173 2.2E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17220 c71ce5b7364c714a32449f9d55126797 459 SUPERFAMILY SSF103473 24 446 2.88E-50 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS17220 c71ce5b7364c714a32449f9d55126797 459 Gene3D G3DSA:1.20.1250.20 35 235 7.1E-27 T 09-03-2017 NA29_RS17220 c71ce5b7364c714a32449f9d55126797 459 Gene3D G3DSA:1.20.1250.20 258 444 2.8E-7 T 09-03-2017 NA29_RS17220 c71ce5b7364c714a32449f9d55126797 459 Pfam PF07690 Major Facilitator Superfamily 42 399 5.7E-31 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS18615 76bfe8e277434ada6ac433e3c365bf1e 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 326 429 7.0E-20 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS18615 76bfe8e277434ada6ac433e3c365bf1e 432 Gene3D G3DSA:3.30.565.10 279 431 1.0E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS18615 76bfe8e277434ada6ac433e3c365bf1e 432 SUPERFAMILY SSF55874 264 429 5.76E-37 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS18615 76bfe8e277434ada6ac433e3c365bf1e 432 Gene3D G3DSA:1.10.287.130 199 270 7.8E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS18615 76bfe8e277434ada6ac433e3c365bf1e 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 210 273 4.5E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS18615 76bfe8e277434ada6ac433e3c365bf1e 432 SMART SM00388 209 274 6.4E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS18615 76bfe8e277434ada6ac433e3c365bf1e 432 SMART SM00387 320 431 1.2E-33 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS18615 76bfe8e277434ada6ac433e3c365bf1e 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 1.0E-16 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS18615 76bfe8e277434ada6ac433e3c365bf1e 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 1.0E-16 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS18615 76bfe8e277434ada6ac433e3c365bf1e 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 1.0E-16 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS18615 76bfe8e277434ada6ac433e3c365bf1e 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 1.0E-16 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS18615 76bfe8e277434ada6ac433e3c365bf1e 432 SUPERFAMILY SSF47384 192 272 1.24E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS18615 76bfe8e277434ada6ac433e3c365bf1e 432 SMART SM00304 156 208 6.3E-4 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS02370 01972592b3582411ecd76a222078496f 526 Gene3D G3DSA:3.40.50.300 220 417 2.2E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02370 01972592b3582411ecd76a222078496f 526 SUPERFAMILY SSF52540 221 522 5.98E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02370 01972592b3582411ecd76a222078496f 526 Gene3D G3DSA:3.40.50.300 420 451 4.4E-4 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02370 01972592b3582411ecd76a222078496f 526 Pfam PF01078 Magnesium chelatase, subunit ChlI 218 422 7.3E-96 T 09-03-2017 IPR000523 Magnesium chelatase ChlI domain NA29_RS02370 01972592b3582411ecd76a222078496f 526 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 237 252 2.7E-6 T 09-03-2017 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 NA29_RS02370 01972592b3582411ecd76a222078496f 526 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 331 2.7E-6 T 09-03-2017 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 NA29_RS02370 01972592b3582411ecd76a222078496f 526 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 345 358 2.7E-6 T 09-03-2017 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 NA29_RS02370 01972592b3582411ecd76a222078496f 526 SUPERFAMILY SSF54211 8 169 3.3E-28 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS02370 01972592b3582411ecd76a222078496f 526 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 522 4.8E-172 T 09-03-2017 IPR004482 Mg chelatase-related protein NA29_RS02370 01972592b3582411ecd76a222078496f 526 Gene3D G3DSA:3.30.230.10 5 169 1.8E-26 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NA29_RS02370 01972592b3582411ecd76a222078496f 526 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.7E-42 T 09-03-2017 NA29_RS02370 01972592b3582411ecd76a222078496f 526 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 430 522 6.7E-27 T 09-03-2017 IPR025158 Mg chelatase-related protein, C-terminal domain NA29_RS02370 01972592b3582411ecd76a222078496f 526 SMART SM00382 238 420 3.4E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS24985 4796bb5d9fe036fafaa1eb378d735a5b 132 Pfam PF00072 Response regulator receiver domain 9 119 1.6E-30 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS24985 4796bb5d9fe036fafaa1eb378d735a5b 132 Gene3D G3DSA:3.40.50.2300 4 128 1.1E-37 T 09-03-2017 NA29_RS24985 4796bb5d9fe036fafaa1eb378d735a5b 132 SMART SM00448 6 120 4.1E-34 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS24985 4796bb5d9fe036fafaa1eb378d735a5b 132 SUPERFAMILY SSF52172 4 126 5.69E-35 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS03810 094cf431eb253b35334059784c566217 778 PRINTS PR00133 Glycosyl hydrolase family 3 signature 176 192 6.8E-23 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NA29_RS03810 094cf431eb253b35334059784c566217 778 PRINTS PR00133 Glycosyl hydrolase family 3 signature 213 229 6.8E-23 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NA29_RS03810 094cf431eb253b35334059784c566217 778 PRINTS PR00133 Glycosyl hydrolase family 3 signature 111 127 6.8E-23 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NA29_RS03810 094cf431eb253b35334059784c566217 778 PRINTS PR00133 Glycosyl hydrolase family 3 signature 130 149 6.8E-23 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NA29_RS03810 094cf431eb253b35334059784c566217 778 PRINTS PR00133 Glycosyl hydrolase family 3 signature 283 301 6.8E-23 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NA29_RS03810 094cf431eb253b35334059784c566217 778 SMART SM01217 698 767 4.3E-33 T 09-03-2017 IPR026891 Fibronectin type III-like domain NA29_RS03810 094cf431eb253b35334059784c566217 778 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 56 360 2.0E-85 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NA29_RS03810 094cf431eb253b35334059784c566217 778 Gene3D G3DSA:3.20.20.300 40 376 4.0E-107 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NA29_RS03810 094cf431eb253b35334059784c566217 778 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 405 661 9.4E-60 T 09-03-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NA29_RS03810 094cf431eb253b35334059784c566217 778 SUPERFAMILY SSF52279 405 474 5.36E-59 T 09-03-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NA29_RS03810 094cf431eb253b35334059784c566217 778 SUPERFAMILY SSF52279 508 664 5.36E-59 T 09-03-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NA29_RS03810 094cf431eb253b35334059784c566217 778 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 283 300 - T 09-03-2017 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 NA29_RS03810 094cf431eb253b35334059784c566217 778 Gene3D G3DSA:3.40.50.1700 507 664 1.8E-79 T 09-03-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NA29_RS03810 094cf431eb253b35334059784c566217 778 Gene3D G3DSA:3.40.50.1700 393 473 1.8E-79 T 09-03-2017 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 NA29_RS03810 094cf431eb253b35334059784c566217 778 Pfam PF14310 Fibronectin type III-like domain 699 767 3.9E-23 T 09-03-2017 IPR026891 Fibronectin type III-like domain NA29_RS03810 094cf431eb253b35334059784c566217 778 SUPERFAMILY SSF51445 44 404 5.26E-102 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily NA29_RS23695 d09ee7e1fc347527432ec17c7652981b 332 Pfam PF00174 Oxidoreductase molybdopterin binding domain 111 266 1.0E-25 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 NA29_RS23695 d09ee7e1fc347527432ec17c7652981b 332 Gene3D G3DSA:3.90.420.10 84 329 1.3E-68 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 NA29_RS23695 d09ee7e1fc347527432ec17c7652981b 332 SUPERFAMILY SSF56524 79 328 1.06E-90 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 NA29_RS23695 d09ee7e1fc347527432ec17c7652981b 332 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 7 332 59.831 T 09-03-2017 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 NA29_RS00745 332fb732022dc083e8c1b11f3451e5aa 246 Pfam PF00072 Response regulator receiver domain 4 115 6.3E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS00745 332fb732022dc083e8c1b11f3451e5aa 246 SMART SM00448 2 114 2.8E-33 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS00745 332fb732022dc083e8c1b11f3451e5aa 246 Pfam PF02954 Bacterial regulatory protein, Fis family 198 237 4.8E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS00745 332fb732022dc083e8c1b11f3451e5aa 246 Gene3D G3DSA:3.40.50.2300 1 125 7.1E-36 T 09-03-2017 NA29_RS00745 332fb732022dc083e8c1b11f3451e5aa 246 SUPERFAMILY SSF52172 1 122 1.1E-37 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS00745 332fb732022dc083e8c1b11f3451e5aa 246 SUPERFAMILY SSF46689 181 239 6.27E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS00745 332fb732022dc083e8c1b11f3451e5aa 246 Gene3D G3DSA:1.10.10.60 192 239 4.5E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 SUPERFAMILY SSF55666 457 556 4.77E-29 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 700 30.281 T 09-03-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 Pfam PF00575 S1 RNA binding domain 626 697 1.5E-15 T 09-03-2017 IPR003029 S1 domain GO:0003676 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 SUPERFAMILY SSF55666 147 237 3.79E-29 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 Pfam PF01138 3' exoribonuclease family, domain 1 331 463 3.9E-23 T 09-03-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 Pfam PF01138 3' exoribonuclease family, domain 1 18 146 1.3E-20 T 09-03-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 SUPERFAMILY SSF50249 627 704 1.12E-19 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 SMART SM00316 627 697 2.1E-23 T 09-03-2017 IPR022967 RNA-binding domain, S1 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 SMART SM00322 559 624 5.6E-14 T 09-03-2017 IPR004087 K Homology domain GO:0003676 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 SUPERFAMILY SSF46915 241 328 1.02E-15 T 09-03-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 327 7.1E-18 T 09-03-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 SUPERFAMILY SSF54211 3 146 2.43E-51 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 Gene3D G3DSA:2.40.50.140 626 701 1.5E-23 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 698 0.0 T 09-03-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 Gene3D G3DSA:3.30.1370.10 559 625 8.8E-26 T 09-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 SUPERFAMILY SSF54791 561 646 6.45E-23 T 09-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 Gene3D G3DSA:3.30.230.70 3 226 5.8E-85 T 09-03-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 Gene3D G3DSA:3.30.230.70 320 548 6.6E-91 T 09-03-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 Gene3D G3DSA:1.10.10.400 241 319 2.0E-20 T 09-03-2017 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 PIRSF PIRSF005499 3 716 1.5E-296 T 09-03-2017 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 SUPERFAMILY SSF54211 302 495 2.53E-50 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 Pfam PF03725 3' exoribonuclease family, domain 2 467 536 1.1E-5 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 Pfam PF03725 3' exoribonuclease family, domain 2 149 212 5.0E-13 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 NA29_RS09150 4790a462ce786cdb9339ac57a833e332 718 Pfam PF00013 KH domain 563 620 2.1E-11 T 09-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 NA29_RS16055 f7289856de7ca2bc128ad70fce33f851 264 SUPERFAMILY SSF56655 1 256 4.32E-83 T 09-03-2017 NA29_RS16055 f7289856de7ca2bc128ad70fce33f851 264 Gene3D G3DSA:3.30.540.10 2 156 3.9E-55 T 09-03-2017 NA29_RS16055 f7289856de7ca2bc128ad70fce33f851 264 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.3E-27 T 09-03-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 NA29_RS16055 f7289856de7ca2bc128ad70fce33f851 264 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 2.3E-27 T 09-03-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 NA29_RS16055 f7289856de7ca2bc128ad70fce33f851 264 PRINTS PR01959 SuhB family inositol monophosphatase signature 197 209 2.3E-27 T 09-03-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 NA29_RS16055 f7289856de7ca2bc128ad70fce33f851 264 PRINTS PR01959 SuhB family inositol monophosphatase signature 155 181 2.3E-27 T 09-03-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 NA29_RS16055 f7289856de7ca2bc128ad70fce33f851 264 Pfam PF00459 Inositol monophosphatase family 2 251 1.1E-67 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS16055 f7289856de7ca2bc128ad70fce33f851 264 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 09-03-2017 IPR020550 Inositol monophosphatase, conserved site GO:0046854 NA29_RS16055 f7289856de7ca2bc128ad70fce33f851 264 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 09-03-2017 IPR020583 Inositol monophosphatase, metal-binding site NA29_RS16055 f7289856de7ca2bc128ad70fce33f851 264 Gene3D G3DSA:3.40.190.80 157 254 5.5E-31 T 09-03-2017 NA29_RS16055 f7289856de7ca2bc128ad70fce33f851 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 2.6E-56 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS16055 f7289856de7ca2bc128ad70fce33f851 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 2.6E-56 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS16055 f7289856de7ca2bc128ad70fce33f851 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 2.6E-56 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS16055 f7289856de7ca2bc128ad70fce33f851 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.6E-56 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS16055 f7289856de7ca2bc128ad70fce33f851 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 2.6E-56 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS16055 f7289856de7ca2bc128ad70fce33f851 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.6E-56 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS20950 ee13a57c7f786a65c3c719cbb5935f57 309 Pfam PF00698 Acyl transferase domain 5 279 2.4E-32 T 09-03-2017 IPR014043 Acyl transferase NA29_RS20950 ee13a57c7f786a65c3c719cbb5935f57 309 Gene3D G3DSA:3.40.366.10 195 288 6.3E-69 T 09-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 NA29_RS20950 ee13a57c7f786a65c3c719cbb5935f57 309 Gene3D G3DSA:3.40.366.10 2 120 6.3E-69 T 09-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 NA29_RS20950 ee13a57c7f786a65c3c719cbb5935f57 309 PIRSF PIRSF000446 1 308 3.9E-112 T 09-03-2017 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 NA29_RS20950 ee13a57c7f786a65c3c719cbb5935f57 309 Gene3D G3DSA:3.30.70.250 123 194 6.4E-30 T 09-03-2017 NA29_RS20950 ee13a57c7f786a65c3c719cbb5935f57 309 SUPERFAMILY SSF55048 126 195 6.8E-17 T 09-03-2017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 NA29_RS20950 ee13a57c7f786a65c3c719cbb5935f57 309 SUPERFAMILY SSF52151 3 120 4.97E-78 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NA29_RS20950 ee13a57c7f786a65c3c719cbb5935f57 309 SUPERFAMILY SSF52151 188 306 4.97E-78 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NA29_RS20950 ee13a57c7f786a65c3c719cbb5935f57 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 298 6.1E-35 T 09-03-2017 IPR020801 Polyketide synthase, acyl transferase domain NA29_RS20950 ee13a57c7f786a65c3c719cbb5935f57 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 289 2.9E-109 T 09-03-2017 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 NA29_RS06115 cb728bfd4b4bd437540c6cfeb49e9930 386 Gene3D G3DSA:1.20.1090.10 186 386 1.0E-62 T 09-03-2017 NA29_RS06115 cb728bfd4b4bd437540c6cfeb49e9930 386 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 377 6.9E-107 T 09-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 NA29_RS06115 cb728bfd4b4bd437540c6cfeb49e9930 386 Gene3D G3DSA:3.40.50.1970 1 185 7.7E-49 T 09-03-2017 NA29_RS06115 cb728bfd4b4bd437540c6cfeb49e9930 386 SUPERFAMILY SSF56796 1 385 1.1E-111 T 09-03-2017 NA29_RS06115 cb728bfd4b4bd437540c6cfeb49e9930 386 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 NA29_RS16980 56632f0e9f4fdf925a7c88c366354eb1 361 SUPERFAMILY SSF49503 140 299 4.65E-49 T 09-03-2017 IPR008972 Cupredoxin NA29_RS16980 56632f0e9f4fdf925a7c88c366354eb1 361 Pfam PF06481 COX Aromatic Rich Motif 260 302 1.7E-14 T 09-03-2017 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 NA29_RS16980 56632f0e9f4fdf925a7c88c366354eb1 361 SUPERFAMILY SSF81464 43 133 7.68E-23 T 09-03-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16980 56632f0e9f4fdf925a7c88c366354eb1 361 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 31 257 1.4E-109 T 09-03-2017 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 NA29_RS16980 56632f0e9f4fdf925a7c88c366354eb1 361 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 167 238 4.2E-7 T 09-03-2017 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16980 56632f0e9f4fdf925a7c88c366354eb1 361 Gene3D G3DSA:1.10.287.90 43 129 3.2E-35 T 09-03-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16980 56632f0e9f4fdf925a7c88c366354eb1 361 Gene3D G3DSA:2.60.40.420 140 296 6.0E-38 T 09-03-2017 IPR008972 Cupredoxin NA29_RS22135 6f8e750099b95b7601208ae7642ab288 131 Pfam PF00545 ribonuclease 45 127 6.0E-29 T 09-03-2017 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 NA29_RS22135 6f8e750099b95b7601208ae7642ab288 131 Gene3D G3DSA:3.10.450.30 38 130 6.3E-40 T 09-03-2017 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 NA29_RS22135 6f8e750099b95b7601208ae7642ab288 131 SUPERFAMILY SSF53933 37 130 4.25E-35 T 09-03-2017 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 NA29_RS13230 a6a2ec15657235a623ce742cf3633b3c 260 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 247 40.183 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 NA29_RS13230 a6a2ec15657235a623ce742cf3633b3c 260 Gene3D G3DSA:3.40.1180.10 11 254 3.9E-96 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 NA29_RS13230 a6a2ec15657235a623ce742cf3633b3c 260 SUPERFAMILY SSF64005 14 242 2.62E-83 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 NA29_RS13230 a6a2ec15657235a623ce742cf3633b3c 260 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 246 5.6E-86 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 NA29_RS13230 a6a2ec15657235a623ce742cf3633b3c 260 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 192 209 - T 09-03-2017 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 NA29_RS13230 a6a2ec15657235a623ce742cf3633b3c 260 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 246 3.2E-79 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 NA29_RS13080 a1cb0c4aebc7bbfa5f1d23e35444dc09 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.1E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13080 a1cb0c4aebc7bbfa5f1d23e35444dc09 302 Gene3D G3DSA:1.10.10.10 4 86 9.8E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13080 a1cb0c4aebc7bbfa5f1d23e35444dc09 302 Gene3D G3DSA:3.40.190.10 177 261 6.3E-20 T 09-03-2017 NA29_RS13080 a1cb0c4aebc7bbfa5f1d23e35444dc09 302 SUPERFAMILY SSF53850 89 297 1.33E-50 T 09-03-2017 NA29_RS13080 a1cb0c4aebc7bbfa5f1d23e35444dc09 302 SUPERFAMILY SSF46785 3 111 2.52E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13080 a1cb0c4aebc7bbfa5f1d23e35444dc09 302 Gene3D G3DSA:3.40.190.10 92 176 1.2E-27 T 09-03-2017 NA29_RS13080 a1cb0c4aebc7bbfa5f1d23e35444dc09 302 Pfam PF03466 LysR substrate binding domain 88 293 2.1E-49 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS13080 a1cb0c4aebc7bbfa5f1d23e35444dc09 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.0E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13080 a1cb0c4aebc7bbfa5f1d23e35444dc09 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.0E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13080 a1cb0c4aebc7bbfa5f1d23e35444dc09 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.0E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS24765 815a387527992a130935069a683a2ddd 465 PRINTS PR00207 Flagellin signature 37 54 1.8E-22 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 NA29_RS24765 815a387527992a130935069a683a2ddd 465 PRINTS PR00207 Flagellin signature 111 134 1.8E-22 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 NA29_RS24765 815a387527992a130935069a683a2ddd 465 PRINTS PR00207 Flagellin signature 76 95 1.8E-22 T 09-03-2017 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 NA29_RS24765 815a387527992a130935069a683a2ddd 465 Pfam PF00700 Bacterial flagellin C-terminal helical region 380 464 4.2E-24 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 NA29_RS24765 815a387527992a130935069a683a2ddd 465 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.3E-39 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 NA29_RS24765 815a387527992a130935069a683a2ddd 465 Gene3D G3DSA:1.20.1330.10 367 421 4.7E-47 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 NA29_RS24765 815a387527992a130935069a683a2ddd 465 Gene3D G3DSA:1.20.1330.10 54 172 4.7E-47 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 NA29_RS24765 815a387527992a130935069a683a2ddd 465 SUPERFAMILY SSF64518 1 465 2.75E-94 T 09-03-2017 NA29_RS01050 c5e1557494fdf81452a296d7087ae8cb 454 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 228 239 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS01050 c5e1557494fdf81452a296d7087ae8cb 454 PIRSF PIRSF036492 1 454 1.1E-150 T 09-03-2017 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 NA29_RS01050 c5e1557494fdf81452a296d7087ae8cb 454 SUPERFAMILY SSF53720 2 427 6.02E-109 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS01050 c5e1557494fdf81452a296d7087ae8cb 454 Gene3D G3DSA:3.40.605.10 4 214 1.5E-50 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS01050 c5e1557494fdf81452a296d7087ae8cb 454 Gene3D G3DSA:3.40.309.10 215 405 1.3E-50 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS01050 c5e1557494fdf81452a296d7087ae8cb 454 Pfam PF00171 Aldehyde dehydrogenase family 3 423 6.3E-83 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS01050 c5e1557494fdf81452a296d7087ae8cb 454 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 200 207 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS11640 6b440d44c21906fdef4eb7fc05555ff0 335 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 09-03-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 NA29_RS11640 6b440d44c21906fdef4eb7fc05555ff0 335 Gene3D G3DSA:3.40.50.1100 92 327 1.5E-53 T 09-03-2017 NA29_RS11640 6b440d44c21906fdef4eb7fc05555ff0 335 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 314 1.7E-60 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS11640 6b440d44c21906fdef4eb7fc05555ff0 335 Gene3D G3DSA:3.40.50.1100 39 91 5.8E-7 T 09-03-2017 NA29_RS11640 6b440d44c21906fdef4eb7fc05555ff0 335 SUPERFAMILY SSF53686 16 321 1.06E-74 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS21390 4e2b0346fbd1576175c3dc5ca1620a04 299 Gene3D G3DSA:3.40.190.10 172 255 1.1E-6 T 09-03-2017 NA29_RS21390 4e2b0346fbd1576175c3dc5ca1620a04 299 Gene3D G3DSA:1.10.10.10 1 79 3.4E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21390 4e2b0346fbd1576175c3dc5ca1620a04 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 57 5.5E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21390 4e2b0346fbd1576175c3dc5ca1620a04 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 34 8.3E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21390 4e2b0346fbd1576175c3dc5ca1620a04 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 13 24 8.3E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21390 4e2b0346fbd1576175c3dc5ca1620a04 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 8.3E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21390 4e2b0346fbd1576175c3dc5ca1620a04 299 SUPERFAMILY SSF46785 2 105 2.9E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21390 4e2b0346fbd1576175c3dc5ca1620a04 299 SUPERFAMILY SSF53850 83 284 1.81E-35 T 09-03-2017 NA29_RS21390 4e2b0346fbd1576175c3dc5ca1620a04 299 Pfam PF03466 LysR substrate binding domain 82 284 1.2E-32 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS21390 4e2b0346fbd1576175c3dc5ca1620a04 299 Gene3D G3DSA:3.40.190.10 86 171 3.3E-20 T 09-03-2017 NA29_RS09270 9f6548bac1d59805686bbf19a9739a66 639 Pfam PF01553 Acyltransferase 452 580 8.4E-25 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 NA29_RS09270 9f6548bac1d59805686bbf19a9739a66 639 SUPERFAMILY SSF103473 20 436 3.53E-30 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS09270 9f6548bac1d59805686bbf19a9739a66 639 Pfam PF07690 Major Facilitator Superfamily 28 397 1.4E-14 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS09270 9f6548bac1d59805686bbf19a9739a66 639 Gene3D G3DSA:1.20.1250.20 236 436 2.0E-7 T 09-03-2017 NA29_RS09270 9f6548bac1d59805686bbf19a9739a66 639 Gene3D G3DSA:1.20.1250.20 26 203 4.3E-10 T 09-03-2017 NA29_RS09270 9f6548bac1d59805686bbf19a9739a66 639 Gene3D G3DSA:3.40.1130.10 453 580 2.4E-19 T 09-03-2017 NA29_RS09270 9f6548bac1d59805686bbf19a9739a66 639 SMART SM00563 467 583 4.8E-29 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 NA29_RS09270 9f6548bac1d59805686bbf19a9739a66 639 SUPERFAMILY SSF69593 428 628 3.4E-33 T 09-03-2017 NA29_RS05555 365f4851820be3da4db69c0e9d388ba8 237 Pfam PF03591 AzlC protein 21 163 1.0E-28 T 09-03-2017 IPR011606 Branched-chain amino acid transport, permease NA29_RS21940 a5bf601adfa547ca7f9bd1ae7d7f5d01 706 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 6 704 24.131 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS21940 a5bf601adfa547ca7f9bd1ae7d7f5d01 706 SUPERFAMILY SSF47323 601 698 7.85E-5 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS21940 a5bf601adfa547ca7f9bd1ae7d7f5d01 706 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 9 567 5.2E-198 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS21940 a5bf601adfa547ca7f9bd1ae7d7f5d01 706 Pfam PF05746 DALR anticodon binding domain 598 691 9.9E-12 T 09-03-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 NA29_RS21940 a5bf601adfa547ca7f9bd1ae7d7f5d01 706 Gene3D G3DSA:1.10.3210.10 371 480 1.8E-4 T 09-03-2017 IPR006674 HD domain NA29_RS21940 a5bf601adfa547ca7f9bd1ae7d7f5d01 706 Gene3D G3DSA:1.10.730.10 599 692 2.9E-7 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS21940 a5bf601adfa547ca7f9bd1ae7d7f5d01 706 SMART SM00836 601 704 4.4E-5 T 09-03-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 NA29_RS21940 a5bf601adfa547ca7f9bd1ae7d7f5d01 706 SUPERFAMILY SSF109604 355 506 1.0E-17 T 09-03-2017 NA29_RS21940 a5bf601adfa547ca7f9bd1ae7d7f5d01 706 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 6 704 1.9E-201 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS21940 a5bf601adfa547ca7f9bd1ae7d7f5d01 706 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 55 67 3.1E-32 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS21940 a5bf601adfa547ca7f9bd1ae7d7f5d01 706 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 255 270 3.1E-32 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS21940 a5bf601adfa547ca7f9bd1ae7d7f5d01 706 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 410 429 3.1E-32 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS21940 a5bf601adfa547ca7f9bd1ae7d7f5d01 706 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 331 347 3.1E-32 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS21940 a5bf601adfa547ca7f9bd1ae7d7f5d01 706 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 10 23 3.1E-32 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS08940 663d56ded2e1f02527349ea713010f3d 195 SUPERFAMILY SSF52540 3 191 5.45E-17 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08940 663d56ded2e1f02527349ea713010f3d 195 Pfam PF13671 AAA domain 4 162 2.0E-24 T 09-03-2017 NA29_RS08940 663d56ded2e1f02527349ea713010f3d 195 Gene3D G3DSA:3.40.50.300 2 143 1.4E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22140 92e288f233298fed1d179c686a9a80d3 767 SMART SM00919 167 404 1.9E-136 T 09-03-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 NA29_RS22140 92e288f233298fed1d179c686a9a80d3 767 ProSitePatterns PS00331 Malic enzymes signature. 163 179 - T 09-03-2017 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 NA29_RS22140 92e288f233298fed1d179c686a9a80d3 767 PIRSF PIRSF036684 3 765 0.0 T 09-03-2017 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 NA29_RS22140 92e288f233298fed1d179c686a9a80d3 767 Pfam PF12434 Malate dehydrogenase enzyme 9 20 1.4E-4 T 09-03-2017 IPR032683 Malate dehydrogenase enzyme, N-terminal NA29_RS22140 92e288f233298fed1d179c686a9a80d3 767 SUPERFAMILY SSF51735 167 442 6.52E-83 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22140 92e288f233298fed1d179c686a9a80d3 767 Gene3D G3DSA:3.40.50.720 165 443 6.6E-86 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22140 92e288f233298fed1d179c686a9a80d3 767 SUPERFAMILY SSF53659 433 760 1.44E-90 T 09-03-2017 NA29_RS22140 92e288f233298fed1d179c686a9a80d3 767 Pfam PF00390 Malic enzyme, N-terminal domain 24 155 3.1E-24 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 NA29_RS22140 92e288f233298fed1d179c686a9a80d3 767 SUPERFAMILY SSF53223 14 165 1.44E-49 T 09-03-2017 NA29_RS22140 92e288f233298fed1d179c686a9a80d3 767 SMART SM01274 22 155 1.9E-73 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 NA29_RS22140 92e288f233298fed1d179c686a9a80d3 767 Pfam PF03949 Malic enzyme, NAD binding domain 169 363 1.5E-21 T 09-03-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 NA29_RS22140 92e288f233298fed1d179c686a9a80d3 767 Gene3D G3DSA:3.40.50.10750 576 732 1.5E-54 T 09-03-2017 NA29_RS22140 92e288f233298fed1d179c686a9a80d3 767 Pfam PF01515 Phosphate acetyl/butaryl transferase 435 756 2.6E-100 T 09-03-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 NA29_RS22140 92e288f233298fed1d179c686a9a80d3 767 Gene3D G3DSA:3.40.50.10380 14 164 1.9E-48 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 NA29_RS14245 7b5cc95f8d7e680301f9c2479c32b672 342 PIRSF PIRSF000164 16 342 1.4E-94 T 09-03-2017 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 NA29_RS14245 7b5cc95f8d7e680301f9c2479c32b672 342 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 5 339 51.397 T 09-03-2017 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS14245 7b5cc95f8d7e680301f9c2479c32b672 342 Gene3D G3DSA:3.20.20.70 6 341 4.4E-127 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS14245 7b5cc95f8d7e680301f9c2479c32b672 342 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 6 340 2.5E-133 T 09-03-2017 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS14245 7b5cc95f8d7e680301f9c2479c32b672 342 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 295 315 - T 09-03-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 NA29_RS14245 7b5cc95f8d7e680301f9c2479c32b672 342 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 83 102 - T 09-03-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 NA29_RS14245 7b5cc95f8d7e680301f9c2479c32b672 342 Pfam PF01180 Dihydroorotate dehydrogenase 51 340 3.5E-88 T 09-03-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 NA29_RS14245 7b5cc95f8d7e680301f9c2479c32b672 342 SUPERFAMILY SSF51395 6 340 2.75E-106 T 09-03-2017 NA29_RS02865 8566ef977d51ab09625d015a46a1ebf8 178 Pfam PF01872 RibD C-terminal domain 7 170 4.0E-18 T 09-03-2017 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 NA29_RS02865 8566ef977d51ab09625d015a46a1ebf8 178 SUPERFAMILY SSF53597 6 176 1.83E-32 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 NA29_RS02865 8566ef977d51ab09625d015a46a1ebf8 178 Gene3D G3DSA:3.40.430.10 6 176 2.9E-31 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 NA29_RS18350 4209e68e9cf6040b098f94929b66ef97 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 5 289 43.54 T 09-03-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS18350 4209e68e9cf6040b098f94929b66ef97 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 9 285 8.7E-71 T 09-03-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS18350 4209e68e9cf6040b098f94929b66ef97 293 SMART SM01130 5 291 2.5E-90 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS18350 4209e68e9cf6040b098f94929b66ef97 293 Pfam PF00701 Dihydrodipicolinate synthetase family 6 287 4.2E-65 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS18350 4209e68e9cf6040b098f94929b66ef97 293 PIRSF PIRSF001365 1 292 6.5E-75 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS18350 4209e68e9cf6040b098f94929b66ef97 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 109 125 4.8E-23 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS18350 4209e68e9cf6040b098f94929b66ef97 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 4.8E-23 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS18350 4209e68e9cf6040b098f94929b66ef97 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 4.8E-23 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS18350 4209e68e9cf6040b098f94929b66ef97 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 4.8E-23 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS18350 4209e68e9cf6040b098f94929b66ef97 293 SUPERFAMILY SSF51569 2 287 4.81E-80 T 09-03-2017 NA29_RS18350 4209e68e9cf6040b098f94929b66ef97 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 44 61 - T 09-03-2017 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS18350 4209e68e9cf6040b098f94929b66ef97 293 Gene3D G3DSA:3.20.20.70 3 288 3.2E-85 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS18350 4209e68e9cf6040b098f94929b66ef97 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 139 169 - T 09-03-2017 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS01955 218f04402b47b0468661c84e46873f69 307 SUPERFAMILY SSF103481 37 139 1.7E-12 T 09-03-2017 NA29_RS01955 218f04402b47b0468661c84e46873f69 307 Pfam PF00892 EamA-like transporter family 5 136 2.2E-19 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS01955 218f04402b47b0468661c84e46873f69 307 Pfam PF00892 EamA-like transporter family 152 281 4.9E-15 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS01955 218f04402b47b0468661c84e46873f69 307 SUPERFAMILY SSF103481 187 281 4.32E-9 T 09-03-2017 NA29_RS01195 0dd39255d058e752e19e282688539c57 119 SUPERFAMILY SSF48076 1 116 1.44E-38 T 09-03-2017 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit NA29_RS01195 0dd39255d058e752e19e282688539c57 119 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 28 114 4.7E-31 T 09-03-2017 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit NA29_RS01195 0dd39255d058e752e19e282688539c57 119 Gene3D G3DSA:1.10.700.10 1 116 2.6E-42 T 09-03-2017 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit NA29_RS09725 a1661b8e3e2a80962dae46d75200c2fa 100 Gene3D G3DSA:1.25.40.10 5 82 1.2E-11 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS09725 a1661b8e3e2a80962dae46d75200c2fa 100 SMART SM00028 16 49 17.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS09725 a1661b8e3e2a80962dae46d75200c2fa 100 SMART SM00028 50 83 15.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS09725 a1661b8e3e2a80962dae46d75200c2fa 100 SUPERFAMILY SSF48452 5 85 4.09E-11 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS19145 ef69874d9ed2c687cc1bebe8c4968a3b 390 SUPERFAMILY SSF53850 18 256 2.17E-25 T 09-03-2017 NA29_RS19145 ef69874d9ed2c687cc1bebe8c4968a3b 390 Pfam PF13379 NMT1-like family 15 262 2.6E-86 T 09-03-2017 NA29_RS25205 5304695ee54cd417608d9899335c3a0a 291 Gene3D G3DSA:1.10.10.10 1 86 5.8E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS25205 5304695ee54cd417608d9899335c3a0a 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.6E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS25205 5304695ee54cd417608d9899335c3a0a 291 Gene3D G3DSA:3.40.190.10 89 192 3.1E-17 T 09-03-2017 NA29_RS25205 5304695ee54cd417608d9899335c3a0a 291 Pfam PF03466 LysR substrate binding domain 87 289 1.2E-31 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS25205 5304695ee54cd417608d9899335c3a0a 291 SUPERFAMILY SSF46785 1 87 4.34E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS25205 5304695ee54cd417608d9899335c3a0a 291 Gene3D G3DSA:3.40.190.10 193 251 2.0E-10 T 09-03-2017 NA29_RS25205 5304695ee54cd417608d9899335c3a0a 291 SUPERFAMILY SSF53850 89 290 2.44E-29 T 09-03-2017 NA29_RS25205 5304695ee54cd417608d9899335c3a0a 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS25205 5304695ee54cd417608d9899335c3a0a 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS25205 5304695ee54cd417608d9899335c3a0a 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03930 2dd5c23a13e644e789aa406e3652130a 555 SUPERFAMILY SSF51338 511 551 4.8E-13 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS03930 2dd5c23a13e644e789aa406e3652130a 555 SUPERFAMILY SSF51338 22 71 4.8E-13 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS03930 2dd5c23a13e644e789aa406e3652130a 555 Gene3D G3DSA:3.20.20.140 222 496 5.8E-20 T 09-03-2017 NA29_RS03930 2dd5c23a13e644e789aa406e3652130a 555 Gene3D G3DSA:2.30.40.10 21 79 1.3E-8 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS03930 2dd5c23a13e644e789aa406e3652130a 555 Gene3D G3DSA:2.30.40.10 497 539 1.7E-6 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS03930 2dd5c23a13e644e789aa406e3652130a 555 Pfam PF07969 Amidohydrolase family 63 550 3.6E-55 T 09-03-2017 IPR013108 Amidohydrolase 3 NA29_RS03930 2dd5c23a13e644e789aa406e3652130a 555 SUPERFAMILY SSF51556 70 114 1.41E-23 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS03930 2dd5c23a13e644e789aa406e3652130a 555 SUPERFAMILY SSF51556 220 512 1.41E-23 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS14630 9c109a524c72cdf379ba0996f518a32b 473 SUPERFAMILY SSF52402 18 249 8.38E-50 T 09-03-2017 NA29_RS14630 9c109a524c72cdf379ba0996f518a32b 473 SMART SM00977 397 469 3.4E-11 T 09-03-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 NA29_RS14630 9c109a524c72cdf379ba0996f518a32b 473 SUPERFAMILY SSF82829 262 338 1.57E-16 T 09-03-2017 NA29_RS14630 9c109a524c72cdf379ba0996f518a32b 473 SUPERFAMILY SSF56037 351 471 7.85E-18 T 09-03-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 NA29_RS14630 9c109a524c72cdf379ba0996f518a32b 473 Pfam PF01171 PP-loop family 21 216 3.8E-50 T 09-03-2017 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 NA29_RS14630 9c109a524c72cdf379ba0996f518a32b 473 Gene3D G3DSA:3.40.50.620 19 196 5.9E-10 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS14630 9c109a524c72cdf379ba0996f518a32b 473 Pfam PF09179 TilS substrate binding domain 269 335 4.0E-11 T 09-03-2017 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 NA29_RS14630 9c109a524c72cdf379ba0996f518a32b 473 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 328 22.772 T 09-03-2017 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 NA29_RS14630 9c109a524c72cdf379ba0996f518a32b 473 Pfam PF11734 TilS substrate C-terminal domain 400 469 8.4E-16 T 09-03-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 NA29_RS14630 9c109a524c72cdf379ba0996f518a32b 473 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 220 3.7E-47 T 09-03-2017 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 NA29_RS10410 67e1ea8a3b3dc48cec58220e5e9c19fb 87 Pfam PF01722 BolA-like protein 11 86 5.0E-28 T 09-03-2017 IPR002634 BolA protein NA29_RS10410 67e1ea8a3b3dc48cec58220e5e9c19fb 87 SUPERFAMILY SSF82657 1 86 4.58E-26 T 09-03-2017 IPR002634 BolA protein NA29_RS10410 67e1ea8a3b3dc48cec58220e5e9c19fb 87 PIRSF PIRSF003113 1 87 6.2E-27 T 09-03-2017 IPR002634 BolA protein NA29_RS10410 67e1ea8a3b3dc48cec58220e5e9c19fb 87 Gene3D G3DSA:3.30.70.1500 1 81 8.5E-28 T 09-03-2017 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 SUPERFAMILY SSF54292 32 104 3.57E-18 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 222 233 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 254 929 1.3E-283 T 09-03-2017 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 SMART SM00926 249 303 2.0E-15 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 Pfam PF00037 4Fe-4S binding domain 219 235 7.5E-5 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 31 106 2.9E-23 T 09-03-2017 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 Gene3D G3DSA:3.40.50.740 306 383 2.5E-91 T 09-03-2017 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 Gene3D G3DSA:3.40.50.740 576 778 2.5E-91 T 09-03-2017 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 SUPERFAMILY SSF50692 789 929 1.72E-41 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 250 301 1.5E-15 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 Gene3D G3DSA:3.40.228.10 384 575 8.4E-57 T 09-03-2017 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 SUPERFAMILY SSF54862 105 244 6.7E-38 T 09-03-2017 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 Pfam PF01568 Molydopterin dinucleotide binding domain 821 925 1.1E-27 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 Gene3D G3DSA:2.20.25.90 262 304 1.8E-18 T 09-03-2017 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 Gene3D G3DSA:3.30.70.20 164 229 5.5E-15 T 09-03-2017 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 SMART SM00929 113 153 1.9E-18 T 09-03-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 Gene3D G3DSA:3.30.70.20 230 261 8.9E-4 T 09-03-2017 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 859 886 - T 09-03-2017 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 PIRSF PIRSF036643 27 961 0.0 T 09-03-2017 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 Gene3D G3DSA:2.40.40.20 779 931 8.5E-42 T 09-03-2017 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 Pfam PF00384 Molybdopterin oxidoreductase 306 737 9.1E-78 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 179 190 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 113 152 1.5E-16 T 09-03-2017 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 Gene3D G3DSA:3.10.20.30 26 84 4.1E-8 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS12735 63f2fa0fa357db89db408362e2d7bf82 966 SUPERFAMILY SSF53706 250 775 6.94E-191 T 09-03-2017 NA29_RS20160 6ee6e9be777e8f2c038fc82cdaee0a7e 161 Gene3D G3DSA:3.30.70.860 95 161 1.8E-32 T 09-03-2017 NA29_RS20160 6ee6e9be777e8f2c038fc82cdaee0a7e 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 28.248 T 09-03-2017 IPR007551 Protein of unknown function DUF520 NA29_RS20160 6ee6e9be777e8f2c038fc82cdaee0a7e 161 Gene3D G3DSA:3.30.70.990 9 94 3.6E-32 T 09-03-2017 NA29_RS20160 6ee6e9be777e8f2c038fc82cdaee0a7e 161 SUPERFAMILY SSF89963 2 87 1.99E-31 T 09-03-2017 IPR007551 Protein of unknown function DUF520 NA29_RS20160 6ee6e9be777e8f2c038fc82cdaee0a7e 161 SUPERFAMILY SSF89963 89 161 3.66E-27 T 09-03-2017 IPR007551 Protein of unknown function DUF520 NA29_RS20160 6ee6e9be777e8f2c038fc82cdaee0a7e 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 3.2E-66 T 09-03-2017 IPR007551 Protein of unknown function DUF520 NA29_RS21890 291c90fb20600b65711f36844a81d222 259 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS21890 291c90fb20600b65711f36844a81d222 259 SMART SM00382 26 203 2.7E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS21890 291c90fb20600b65711f36844a81d222 259 Pfam PF00005 ABC transporter 17 154 1.1E-24 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS21890 291c90fb20600b65711f36844a81d222 259 SUPERFAMILY SSF52540 2 213 1.4E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS21890 291c90fb20600b65711f36844a81d222 259 Gene3D G3DSA:3.40.50.300 2 214 3.3E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20700 2f479818dd7c3250df53fa62a409ae8f 524 SUPERFAMILY SSF53720 19 517 3.4E-101 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS20700 2f479818dd7c3250df53fa62a409ae8f 524 Gene3D G3DSA:3.40.605.10 6 265 1.8E-44 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS20700 2f479818dd7c3250df53fa62a409ae8f 524 Pfam PF00171 Aldehyde dehydrogenase family 17 458 1.5E-45 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS20700 2f479818dd7c3250df53fa62a409ae8f 524 Gene3D G3DSA:3.40.309.10 267 454 8.2E-56 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS06765 6b75b5c10a931f13420f9f6dc5411b28 445 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 38 436 1.5E-175 T 09-03-2017 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 NA29_RS06765 6b75b5c10a931f13420f9f6dc5411b28 445 Pfam PF01979 Amidohydrolase family 77 439 2.7E-61 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS06765 6b75b5c10a931f13420f9f6dc5411b28 445 Gene3D G3DSA:3.20.20.140 86 382 8.6E-107 T 09-03-2017 NA29_RS06765 6b75b5c10a931f13420f9f6dc5411b28 445 Gene3D G3DSA:2.30.40.10 30 85 3.9E-11 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS06765 6b75b5c10a931f13420f9f6dc5411b28 445 SUPERFAMILY SSF51556 80 382 1.36E-93 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS06765 6b75b5c10a931f13420f9f6dc5411b28 445 SUPERFAMILY SSF51338 382 407 6.29E-13 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS06765 6b75b5c10a931f13420f9f6dc5411b28 445 SUPERFAMILY SSF51338 40 81 6.29E-13 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS04535 a9c470caf9330191ec7b5180edfaabf9 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 1.1E-61 T 09-03-2017 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS04535 a9c470caf9330191ec7b5180edfaabf9 142 SUPERFAMILY SSF52161 1 138 6.8E-59 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 NA29_RS04535 a9c470caf9330191ec7b5180edfaabf9 142 Pfam PF00572 Ribosomal protein L13 14 138 1.9E-54 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 NA29_RS04535 a9c470caf9330191ec7b5180edfaabf9 142 Gene3D G3DSA:3.90.1180.10 3 141 9.3E-64 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 NA29_RS04535 a9c470caf9330191ec7b5180edfaabf9 142 PIRSF PIRSF002181 1 142 2.4E-48 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 NA29_RS04535 a9c470caf9330191ec7b5180edfaabf9 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.639 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 NA29_RS20540 9955d54ca27d60446c29490d050ec6f8 258 PRINTS PR01703 Manganese superoxide dismutase signature 218 230 1.6E-21 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20540 9955d54ca27d60446c29490d050ec6f8 258 PRINTS PR01703 Manganese superoxide dismutase signature 65 76 1.6E-21 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20540 9955d54ca27d60446c29490d050ec6f8 258 PRINTS PR01703 Manganese superoxide dismutase signature 129 142 1.6E-21 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20540 9955d54ca27d60446c29490d050ec6f8 258 PRINTS PR01703 Manganese superoxide dismutase signature 181 189 1.6E-21 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20540 9955d54ca27d60446c29490d050ec6f8 258 PRINTS PR01703 Manganese superoxide dismutase signature 86 99 1.6E-21 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20540 9955d54ca27d60446c29490d050ec6f8 258 Gene3D G3DSA:1.10.287.990 79 146 6.0E-20 T 09-03-2017 NA29_RS20540 9955d54ca27d60446c29490d050ec6f8 258 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 152 253 1.3E-31 T 09-03-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20540 9955d54ca27d60446c29490d050ec6f8 258 SUPERFAMILY SSF46609 63 147 2.88E-31 T 09-03-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20540 9955d54ca27d60446c29490d050ec6f8 258 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 220 227 - T 09-03-2017 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20540 9955d54ca27d60446c29490d050ec6f8 258 SUPERFAMILY SSF54719 150 256 1.57E-36 T 09-03-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20540 9955d54ca27d60446c29490d050ec6f8 258 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 63 146 9.9E-27 T 09-03-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS07190 aa6ae6dcccb1223fa5de3f4350d4a107 287 Gene3D G3DSA:1.10.12.10 229 287 2.2E-18 T 09-03-2017 IPR014748 Crontonase, C-terminal NA29_RS07190 aa6ae6dcccb1223fa5de3f4350d4a107 287 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 127 147 - T 09-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 NA29_RS07190 aa6ae6dcccb1223fa5de3f4350d4a107 287 Pfam PF00378 Enoyl-CoA hydratase/isomerase 36 286 1.2E-36 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS07190 aa6ae6dcccb1223fa5de3f4350d4a107 287 Gene3D G3DSA:3.90.226.10 33 227 6.0E-51 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS07190 aa6ae6dcccb1223fa5de3f4350d4a107 287 SUPERFAMILY SSF52096 34 286 1.51E-70 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS03040 2ae45bec2476d296ec9cd45161748c9e 395 Gene3D G3DSA:3.60.21.10 5 277 1.5E-23 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS03040 2ae45bec2476d296ec9cd45161748c9e 395 SUPERFAMILY SSF56300 6 267 1.09E-28 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS03040 2ae45bec2476d296ec9cd45161748c9e 395 Pfam PF00149 Calcineurin-like phosphoesterase 7 240 6.1E-12 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NA29_RS00585 45f75e3180dcc4fb347d8d68e8bbe964 278 Pfam PF07729 FCD domain 109 238 4.4E-19 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS00585 45f75e3180dcc4fb347d8d68e8bbe964 278 SMART SM00895 109 239 6.7E-16 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS00585 45f75e3180dcc4fb347d8d68e8bbe964 278 SMART SM00345 23 85 5.4E-14 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS00585 45f75e3180dcc4fb347d8d68e8bbe964 278 SUPERFAMILY SSF48008 107 245 3.14E-22 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS00585 45f75e3180dcc4fb347d8d68e8bbe964 278 SUPERFAMILY SSF46785 17 91 9.11E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00585 45f75e3180dcc4fb347d8d68e8bbe964 278 Gene3D G3DSA:1.10.10.10 13 77 2.0E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00585 45f75e3180dcc4fb347d8d68e8bbe964 278 Gene3D G3DSA:1.20.120.530 106 246 1.4E-22 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS00585 45f75e3180dcc4fb347d8d68e8bbe964 278 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 77 4.0E-17 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS00585 45f75e3180dcc4fb347d8d68e8bbe964 278 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 9.4E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS00585 45f75e3180dcc4fb347d8d68e8bbe964 278 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 9.4E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS05800 13e4800b5085dddead42691894c5e6fb 414 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 106 1.0E-17 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS05800 13e4800b5085dddead42691894c5e6fb 414 SUPERFAMILY SSF47203 256 406 6.28E-19 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS05800 13e4800b5085dddead42691894c5e6fb 414 Gene3D G3DSA:1.10.540.10 12 106 8.1E-24 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS05800 13e4800b5085dddead42691894c5e6fb 414 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 267 386 8.8E-13 T 09-03-2017 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS05800 13e4800b5085dddead42691894c5e6fb 414 Gene3D G3DSA:1.20.140.10 241 406 1.1E-27 T 09-03-2017 NA29_RS05800 13e4800b5085dddead42691894c5e6fb 414 SUPERFAMILY SSF56645 13 251 3.66E-47 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NA29_RS05800 13e4800b5085dddead42691894c5e6fb 414 Gene3D G3DSA:2.40.110.10 157 240 1.8E-23 T 09-03-2017 NA29_RS05800 13e4800b5085dddead42691894c5e6fb 414 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 160 240 2.2E-13 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NA29_RS07875 211fa923574a4c044c9992f55dbf7f39 295 Pfam PF00483 Nucleotidyl transferase 12 267 1.4E-26 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 NA29_RS07875 211fa923574a4c044c9992f55dbf7f39 295 Gene3D G3DSA:3.90.550.10 5 278 2.2E-70 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS07875 211fa923574a4c044c9992f55dbf7f39 295 SUPERFAMILY SSF53448 6 279 2.04E-66 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS07875 211fa923574a4c044c9992f55dbf7f39 295 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 267 1.2E-115 T 09-03-2017 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 NA29_RS10180 1cbdc888781478d5d2638c1d0b6c8fdc 276 Pfam PF00557 Metallopeptidase family M24 17 244 5.2E-53 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS10180 1cbdc888781478d5d2638c1d0b6c8fdc 276 SUPERFAMILY SSF55920 7 257 4.71E-92 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS10180 1cbdc888781478d5d2638c1d0b6c8fdc 276 Hamap MF_01974 Methionine aminopeptidase [map]. 6 253 40.681 T 09-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 NA29_RS10180 1cbdc888781478d5d2638c1d0b6c8fdc 276 PRINTS PR00599 Methionine aminopeptidase-1 signature 195 207 2.0E-22 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase NA29_RS10180 1cbdc888781478d5d2638c1d0b6c8fdc 276 PRINTS PR00599 Methionine aminopeptidase-1 signature 72 85 2.0E-22 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase NA29_RS10180 1cbdc888781478d5d2638c1d0b6c8fdc 276 PRINTS PR00599 Methionine aminopeptidase-1 signature 94 110 2.0E-22 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase NA29_RS10180 1cbdc888781478d5d2638c1d0b6c8fdc 276 PRINTS PR00599 Methionine aminopeptidase-1 signature 164 176 2.0E-22 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase NA29_RS10180 1cbdc888781478d5d2638c1d0b6c8fdc 276 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 7 252 4.1E-94 T 09-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 NA29_RS10180 1cbdc888781478d5d2638c1d0b6c8fdc 276 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 170 188 - T 09-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 NA29_RS10180 1cbdc888781478d5d2638c1d0b6c8fdc 276 Gene3D G3DSA:3.90.230.10 8 257 2.9E-94 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 190 208 6.7E-44 T 09-03-2017 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.7E-44 T 09-03-2017 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 307 329 6.7E-44 T 09-03-2017 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 6.7E-44 T 09-03-2017 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 294 6.7E-44 T 09-03-2017 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 PIRSF PIRSF000350 1 478 9.2E-85 T 09-03-2017 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 342 1.0E-73 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 46 61 4.9E-79 T 09-03-2017 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 190 215 4.9E-79 T 09-03-2017 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 163 4.9E-79 T 09-03-2017 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 444 464 4.9E-79 T 09-03-2017 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 293 4.9E-79 T 09-03-2017 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 422 437 4.9E-79 T 09-03-2017 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 322 329 4.9E-79 T 09-03-2017 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 357 378 4.9E-79 T 09-03-2017 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.9E-79 T 09-03-2017 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 Gene3D G3DSA:3.30.390.30 349 477 4.3E-49 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 361 469 3.6E-36 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 SUPERFAMILY SSF51905 2 352 4.5E-64 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 Gene3D G3DSA:3.50.50.60 155 348 4.4E-53 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 SUPERFAMILY SSF55424 357 478 7.04E-41 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 478 2.6E-169 T 09-03-2017 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 Gene3D G3DSA:3.50.50.60 4 154 3.8E-41 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS09760 54800704897b2aa00b2a7c804fac11e8 480 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 47 57 - T 09-03-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 NA29_RS15770 919ce35576536c56fe18ad59970a25cb 232 Gene3D G3DSA:3.40.50.150 19 211 6.6E-45 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS15770 919ce35576536c56fe18ad59970a25cb 232 Pfam PF13489 Methyltransferase domain 47 199 1.8E-24 T 09-03-2017 NA29_RS15770 919ce35576536c56fe18ad59970a25cb 232 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 225 9.0E-88 T 09-03-2017 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 NA29_RS15770 919ce35576536c56fe18ad59970a25cb 232 SUPERFAMILY SSF53335 11 226 6.5E-48 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS15770 919ce35576536c56fe18ad59970a25cb 232 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 6 231 38.734 T 09-03-2017 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 NA29_RS04285 4e0f807ddfad5bb8118f849844c9fb81 165 Gene3D G3DSA:3.30.420.10 1 147 9.3E-36 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS04285 4e0f807ddfad5bb8118f849844c9fb81 165 SUPERFAMILY SSF53098 1 153 2.73E-36 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS04285 4e0f807ddfad5bb8118f849844c9fb81 165 Pfam PF13683 Integrase core domain 82 147 1.4E-28 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 NA29_RS01740 ec13c7e7351dea2a7d978d5147ab41e2 151 SMART SM00347 30 130 3.6E-18 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS01740 ec13c7e7351dea2a7d978d5147ab41e2 151 SUPERFAMILY SSF46785 7 145 1.18E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01740 ec13c7e7351dea2a7d978d5147ab41e2 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 7.2E-13 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS01740 ec13c7e7351dea2a7d978d5147ab41e2 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 7.2E-13 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS01740 ec13c7e7351dea2a7d978d5147ab41e2 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 7.2E-13 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS01740 ec13c7e7351dea2a7d978d5147ab41e2 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 7.2E-13 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS01740 ec13c7e7351dea2a7d978d5147ab41e2 151 Gene3D G3DSA:1.10.10.10 2 141 2.4E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01740 ec13c7e7351dea2a7d978d5147ab41e2 151 Pfam PF12802 MarR family 36 94 1.0E-12 T 09-03-2017 NA29_RS01740 ec13c7e7351dea2a7d978d5147ab41e2 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 103 - T 09-03-2017 IPR023187 Transcriptional regulator MarR-type, conserved site NA29_RS20995 22bec32fce8d6eb30e3489279770ae49 220 Gene3D G3DSA:1.10.150.240 20 80 6.3E-9 T 09-03-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 NA29_RS20995 22bec32fce8d6eb30e3489279770ae49 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 184 3.6E-31 T 09-03-2017 IPR023214 HAD-like domain NA29_RS20995 22bec32fce8d6eb30e3489279770ae49 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 84 186 4.0E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS20995 22bec32fce8d6eb30e3489279770ae49 220 SUPERFAMILY SSF56784 6 218 1.9E-60 T 09-03-2017 IPR023214 HAD-like domain NA29_RS20995 22bec32fce8d6eb30e3489279770ae49 220 Gene3D G3DSA:3.40.50.1000 84 217 2.0E-41 T 09-03-2017 IPR023214 HAD-like domain NA29_RS20995 22bec32fce8d6eb30e3489279770ae49 220 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 127 180 4.4E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS00635 829e216a67ded2a112bbfc084055a6df 133 Pfam PF03061 Thioesterase superfamily 48 121 4.4E-13 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 NA29_RS00635 829e216a67ded2a112bbfc084055a6df 133 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 18 131 4.0E-16 T 09-03-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 NA29_RS00635 829e216a67ded2a112bbfc084055a6df 133 Gene3D G3DSA:3.10.129.10 15 132 1.2E-38 T 09-03-2017 IPR029069 HotDog domain NA29_RS00635 829e216a67ded2a112bbfc084055a6df 133 SUPERFAMILY SSF54637 14 132 6.54E-28 T 09-03-2017 IPR029069 HotDog domain NA29_RS20190 9c80564545c1d61d6a4334be8100744c 246 SUPERFAMILY SSF49354 15 122 2.62E-6 T 09-03-2017 IPR008962 PapD-like NA29_RS03135 95d110571faa8583cc610f039d6a439f 247 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS03135 95d110571faa8583cc610f039d6a439f 247 SUPERFAMILY SSF52540 4 237 8.24E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03135 95d110571faa8583cc610f039d6a439f 247 SMART SM00382 28 215 2.6E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS03135 95d110571faa8583cc610f039d6a439f 247 Pfam PF00005 ABC transporter 20 167 1.7E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS03135 95d110571faa8583cc610f039d6a439f 247 PIRSF PIRSF039085 1 243 1.5E-106 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 NA29_RS03135 95d110571faa8583cc610f039d6a439f 247 Gene3D G3DSA:3.40.50.300 3 239 2.8E-80 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24590 10ae77a791202ec724edec59992d1687 149 SMART SM00881 10 114 1.7E-14 T 09-03-2017 IPR003781 CoA-binding GO:0048037 NA29_RS24590 10ae77a791202ec724edec59992d1687 149 Pfam PF13380 CoA binding domain 15 141 7.7E-37 T 09-03-2017 IPR003781 CoA-binding GO:0048037 NA29_RS24590 10ae77a791202ec724edec59992d1687 149 SUPERFAMILY SSF51735 8 142 2.17E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS24590 10ae77a791202ec724edec59992d1687 149 Gene3D G3DSA:3.40.50.720 8 143 2.1E-42 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13305 9cac50a6ffe4480f2b4f340955b2da9d 275 Gene3D G3DSA:2.160.10.10 91 257 2.4E-62 T 09-03-2017 NA29_RS13305 9cac50a6ffe4480f2b4f340955b2da9d 275 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 274 2.7E-147 T 09-03-2017 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 NA29_RS13305 9cac50a6ffe4480f2b4f340955b2da9d 275 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 177 211 1.1E-13 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS13305 9cac50a6ffe4480f2b4f340955b2da9d 275 Gene3D G3DSA:1.10.166.10 2 70 1.7E-31 T 09-03-2017 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 NA29_RS13305 9cac50a6ffe4480f2b4f340955b2da9d 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 168 4.1E-4 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS13305 9cac50a6ffe4480f2b4f340955b2da9d 275 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 NA29_RS13305 9cac50a6ffe4480f2b4f340955b2da9d 275 SUPERFAMILY SSF51161 4 258 4.57E-75 T 09-03-2017 IPR011004 Trimeric LpxA-like NA29_RS13305 9cac50a6ffe4480f2b4f340955b2da9d 275 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 70 2.7E-26 T 09-03-2017 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 NA29_RS13305 9cac50a6ffe4480f2b4f340955b2da9d 275 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 274 57.352 T 09-03-2017 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 NA29_RS14175 c5b67eb66fdcacf823f789349cf90f28 154 SUPERFAMILY SSF55729 6 148 2.92E-28 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS14175 c5b67eb66fdcacf823f789349cf90f28 154 Pfam PF00583 Acetyltransferase (GNAT) family 66 139 5.3E-11 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS14175 c5b67eb66fdcacf823f789349cf90f28 154 Gene3D G3DSA:3.40.630.30 5 147 4.3E-29 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS07530 e45ac5d55adccc68c909a23eaaf1f8ec 380 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 94 104 4.9E-6 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS07530 e45ac5d55adccc68c909a23eaaf1f8ec 380 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 259 277 4.9E-6 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS07530 e45ac5d55adccc68c909a23eaaf1f8ec 380 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 4.9E-6 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS07530 e45ac5d55adccc68c909a23eaaf1f8ec 380 SUPERFAMILY SSF53822 28 374 3.64E-84 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS07530 e45ac5d55adccc68c909a23eaaf1f8ec 380 Pfam PF13458 Periplasmic binding protein 28 366 2.8E-51 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS07530 e45ac5d55adccc68c909a23eaaf1f8ec 380 Gene3D G3DSA:3.40.50.2300 28 229 2.7E-59 T 09-03-2017 NA29_RS15635 e813a8df072387ab49ff9657efac2182 162 Pfam PF00186 Dihydrofolate reductase 4 161 9.4E-59 T 09-03-2017 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 NA29_RS15635 e813a8df072387ab49ff9657efac2182 162 Gene3D G3DSA:3.40.430.10 2 161 4.7E-60 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 NA29_RS15635 e813a8df072387ab49ff9657efac2182 162 SUPERFAMILY SSF53597 3 161 7.55E-57 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 NA29_RS15635 e813a8df072387ab49ff9657efac2182 162 PRINTS PR00070 Dihydrofolate reductase signature 42 53 1.0E-14 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 NA29_RS15635 e813a8df072387ab49ff9657efac2182 162 PRINTS PR00070 Dihydrofolate reductase signature 29 37 1.0E-14 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 NA29_RS15635 e813a8df072387ab49ff9657efac2182 162 PRINTS PR00070 Dihydrofolate reductase signature 15 25 1.0E-14 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 NA29_RS15635 e813a8df072387ab49ff9657efac2182 162 PRINTS PR00070 Dihydrofolate reductase signature 93 107 1.0E-14 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 NA29_RS15635 e813a8df072387ab49ff9657efac2182 162 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 15 37 - T 09-03-2017 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-113510|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-69205 NA29_RS15635 e813a8df072387ab49ff9657efac2182 162 PIRSF PIRSF000194 1 162 9.3E-63 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 NA29_RS09220 4e1f13c4ac812d8e8cd3bd0fcfa677a9 174 SUPERFAMILY SSF46955 21 140 1.98E-22 T 09-03-2017 IPR009061 Putative DNA-binding domain NA29_RS09220 4e1f13c4ac812d8e8cd3bd0fcfa677a9 174 Gene3D G3DSA:1.10.1660.10 20 74 9.5E-22 T 09-03-2017 NA29_RS09220 4e1f13c4ac812d8e8cd3bd0fcfa677a9 174 Pfam PF13411 MerR HTH family regulatory protein 22 87 1.3E-18 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS09220 4e1f13c4ac812d8e8cd3bd0fcfa677a9 174 SMART SM00422 21 89 1.2E-21 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS09220 4e1f13c4ac812d8e8cd3bd0fcfa677a9 174 Gene3D G3DSA:1.10.1660.10 75 150 1.1E-6 T 09-03-2017 NA29_RS21935 e2d48eb0d7e9d2a26596fc441b74aa73 312 Gene3D G3DSA:3.30.930.10 1 216 3.7E-104 T 09-03-2017 NA29_RS21935 e2d48eb0d7e9d2a26596fc441b74aa73 312 Gene3D G3DSA:1.20.58.180 219 299 1.7E-37 T 09-03-2017 NA29_RS21935 e2d48eb0d7e9d2a26596fc441b74aa73 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 2.5E-68 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS21935 e2d48eb0d7e9d2a26596fc441b74aa73 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 2.5E-68 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS21935 e2d48eb0d7e9d2a26596fc441b74aa73 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 2.5E-68 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS21935 e2d48eb0d7e9d2a26596fc441b74aa73 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 2.5E-68 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS21935 e2d48eb0d7e9d2a26596fc441b74aa73 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.5E-68 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS21935 e2d48eb0d7e9d2a26596fc441b74aa73 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 2.5E-68 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS21935 e2d48eb0d7e9d2a26596fc441b74aa73 312 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 301 3.2E-157 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS21935 e2d48eb0d7e9d2a26596fc441b74aa73 312 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 292 1.1E-148 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS21935 e2d48eb0d7e9d2a26596fc441b74aa73 312 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 294 60.553 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 NA29_RS21935 e2d48eb0d7e9d2a26596fc441b74aa73 312 SUPERFAMILY SSF55681 3 293 2.65E-129 T 09-03-2017 NA29_RS21005 f280eb0f3fca8aaa6015833b8d3cb356 1110 SMART SM00316 37 118 5.9E-11 T 09-03-2017 IPR022967 RNA-binding domain, S1 NA29_RS21005 f280eb0f3fca8aaa6015833b8d3cb356 1110 Hamap MF_00970 Ribonuclease E [rne]. 1 1093 35.082 T 09-03-2017 IPR028878 Ribonuclease E GO:0006396|GO:0008995 NA29_RS21005 f280eb0f3fca8aaa6015833b8d3cb356 1110 Pfam PF10150 Ribonuclease E/G family 120 392 2.0E-92 T 09-03-2017 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 NA29_RS21005 f280eb0f3fca8aaa6015833b8d3cb356 1110 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 3.0E-158 T 09-03-2017 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 NA29_RS21005 f280eb0f3fca8aaa6015833b8d3cb356 1110 Gene3D G3DSA:2.40.50.140 31 124 3.6E-33 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS21005 f280eb0f3fca8aaa6015833b8d3cb356 1110 Pfam PF00575 S1 RNA binding domain 36 117 5.7E-11 T 09-03-2017 IPR003029 S1 domain GO:0003676 NA29_RS21005 f280eb0f3fca8aaa6015833b8d3cb356 1110 SUPERFAMILY SSF50249 39 124 3.8E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS00720 1f6ffae4a53a474a65ade175080a2a92 325 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 313 1.1E-85 T 09-03-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 NA29_RS00720 1f6ffae4a53a474a65ade175080a2a92 325 Pfam PF02911 Formyl transferase, C-terminal domain 214 311 6.3E-25 T 09-03-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS00720 1f6ffae4a53a474a65ade175080a2a92 325 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 142 165 - T 09-03-2017 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS00720 1f6ffae4a53a474a65ade175080a2a92 325 Gene3D G3DSA:3.10.25.10 217 319 1.9E-31 T 09-03-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS00720 1f6ffae4a53a474a65ade175080a2a92 325 Pfam PF00551 Formyl transferase 4 190 4.5E-46 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS00720 1f6ffae4a53a474a65ade175080a2a92 325 SUPERFAMILY SSF53328 1 214 1.83E-64 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS00720 1f6ffae4a53a474a65ade175080a2a92 325 SUPERFAMILY SSF50486 215 319 1.43E-29 T 09-03-2017 IPR011034 Formyl transferase, C-terminal-like GO:0003824 NA29_RS00720 1f6ffae4a53a474a65ade175080a2a92 325 Gene3D G3DSA:3.40.50.170 2 215 1.1E-78 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS00720 1f6ffae4a53a474a65ade175080a2a92 325 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 3 314 36.061 T 09-03-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 NA29_RS13290 415e08e3cfe08694cd6ecf27f8f8fbde 1171 PIRSF PIRSF005719 1 1170 8.6E-250 T 09-03-2017 IPR024704 Structural maintenance of chromosomes protein NA29_RS13290 415e08e3cfe08694cd6ecf27f8f8fbde 1171 SUPERFAMILY SSF75553 485 673 1.7E-9 T 09-03-2017 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 NA29_RS13290 415e08e3cfe08694cd6ecf27f8f8fbde 1171 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1163 22.013 T 09-03-2017 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 NA29_RS13290 415e08e3cfe08694cd6ecf27f8f8fbde 1171 Pfam PF06470 SMC proteins Flexible Hinge Domain 521 621 8.4E-6 T 09-03-2017 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 NA29_RS13290 415e08e3cfe08694cd6ecf27f8f8fbde 1171 SMART SM00968 518 625 3.0E-11 T 09-03-2017 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 NA29_RS13290 415e08e3cfe08694cd6ecf27f8f8fbde 1171 Gene3D G3DSA:3.40.50.300 2 166 4.8E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13290 415e08e3cfe08694cd6ecf27f8f8fbde 1171 Gene3D G3DSA:3.40.50.300 993 1165 4.8E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13290 415e08e3cfe08694cd6ecf27f8f8fbde 1171 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1161 0.0 T 09-03-2017 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 NA29_RS13290 415e08e3cfe08694cd6ecf27f8f8fbde 1171 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1154 7.3E-62 T 09-03-2017 IPR003395 RecF/RecN/SMC, N-terminal NA29_RS13290 415e08e3cfe08694cd6ecf27f8f8fbde 1171 SUPERFAMILY SSF52540 1047 1163 1.0E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13290 415e08e3cfe08694cd6ecf27f8f8fbde 1171 SUPERFAMILY SSF52540 2 213 1.0E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22925 5176f4c7bc91c0c26dff28174bbcb794 247 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 56 226 2.0E-53 T 09-03-2017 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 NA29_RS22925 5176f4c7bc91c0c26dff28174bbcb794 247 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 55 228 1.5E-39 T 09-03-2017 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 NA29_RS12225 970db14cf578e6ee65bf8a2a97668867 371 Gene3D G3DSA:3.40.50.150 76 358 2.0E-80 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS12225 970db14cf578e6ee65bf8a2a97668867 371 Pfam PF02353 Mycolic acid cyclopropane synthetase 80 315 3.5E-42 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS12225 970db14cf578e6ee65bf8a2a97668867 371 SUPERFAMILY SSF53335 84 362 3.5E-57 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS21545 1ef969e2b5ca6d59e09a753491310ec7 265 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 79 263 4.3E-54 T 09-03-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 NA29_RS21545 1ef969e2b5ca6d59e09a753491310ec7 265 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 51 264 30.546 T 09-03-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 NA29_RS21545 1ef969e2b5ca6d59e09a753491310ec7 265 Pfam PF02390 Putative methyltransferase 93 259 5.2E-54 T 09-03-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 NA29_RS21545 1ef969e2b5ca6d59e09a753491310ec7 265 Gene3D G3DSA:3.40.50.150 91 223 7.9E-20 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS21545 1ef969e2b5ca6d59e09a753491310ec7 265 SUPERFAMILY SSF53335 43 264 5.83E-47 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS20110 d80bba809e1b0da7161d034087c2c8ca 252 Gene3D G3DSA:3.40.50.720 2 249 9.1E-68 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS20110 d80bba809e1b0da7161d034087c2c8ca 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS20110 d80bba809e1b0da7161d034087c2c8ca 252 SUPERFAMILY SSF51735 1 249 1.61E-59 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS20110 d80bba809e1b0da7161d034087c2c8ca 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.3E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20110 d80bba809e1b0da7161d034087c2c8ca 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.3E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20110 d80bba809e1b0da7161d034087c2c8ca 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.3E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20110 d80bba809e1b0da7161d034087c2c8ca 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.3E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20110 d80bba809e1b0da7161d034087c2c8ca 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 4.3E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20110 d80bba809e1b0da7161d034087c2c8ca 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 0.0012 T 09-03-2017 NA29_RS20110 d80bba809e1b0da7161d034087c2c8ca 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 7.7E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20110 d80bba809e1b0da7161d034087c2c8ca 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 7.7E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20110 d80bba809e1b0da7161d034087c2c8ca 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 7.7E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20110 d80bba809e1b0da7161d034087c2c8ca 252 Pfam PF00106 short chain dehydrogenase 7 196 9.1E-45 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11540 42483bbb1780696cff27e89f7dea5587 324 Gene3D G3DSA:3.40.190.10 98 183 1.5E-26 T 09-03-2017 NA29_RS11540 42483bbb1780696cff27e89f7dea5587 324 Pfam PF03466 LysR substrate binding domain 94 301 5.5E-43 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS11540 42483bbb1780696cff27e89f7dea5587 324 Gene3D G3DSA:1.10.10.10 11 89 3.6E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11540 42483bbb1780696cff27e89f7dea5587 324 SUPERFAMILY SSF53850 94 303 4.65E-46 T 09-03-2017 NA29_RS11540 42483bbb1780696cff27e89f7dea5587 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.5E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11540 42483bbb1780696cff27e89f7dea5587 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.5E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11540 42483bbb1780696cff27e89f7dea5587 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.5E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11540 42483bbb1780696cff27e89f7dea5587 324 Gene3D G3DSA:3.40.190.10 184 266 3.0E-4 T 09-03-2017 NA29_RS11540 42483bbb1780696cff27e89f7dea5587 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 9.3E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11540 42483bbb1780696cff27e89f7dea5587 324 SUPERFAMILY SSF46785 11 118 1.14E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08465 40c23a9378f43ef27fd4aa55747200a4 255 SUPERFAMILY SSF46894 126 223 2.69E-18 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS08465 40c23a9378f43ef27fd4aa55747200a4 255 SMART SM00862 147 223 1.9E-14 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS08465 40c23a9378f43ef27fd4aa55747200a4 255 SUPERFAMILY SSF52172 12 121 1.43E-7 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS08465 40c23a9378f43ef27fd4aa55747200a4 255 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 223 9.3E-14 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS08465 40c23a9378f43ef27fd4aa55747200a4 255 Gene3D G3DSA:1.10.10.10 145 225 1.6E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08465 40c23a9378f43ef27fd4aa55747200a4 255 Gene3D G3DSA:3.40.50.2300 14 144 4.4E-4 T 09-03-2017 NA29_RS19490 ccc206453070b4adec964e5b2349df14 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.5E-154 T 09-03-2017 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 NA29_RS19490 ccc206453070b4adec964e5b2349df14 489 SMART SM00316 37 120 5.3E-6 T 09-03-2017 IPR022967 RNA-binding domain, S1 NA29_RS19490 ccc206453070b4adec964e5b2349df14 489 Pfam PF10150 Ribonuclease E/G family 122 393 5.6E-103 T 09-03-2017 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 NA29_RS19490 ccc206453070b4adec964e5b2349df14 489 SUPERFAMILY SSF50249 39 126 1.82E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS19490 ccc206453070b4adec964e5b2349df14 489 Gene3D G3DSA:2.40.50.140 30 126 2.7E-32 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS02720 21657016ed8550475998045b81634882 290 Gene3D G3DSA:3.40.50.300 1 160 2.8E-13 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02720 21657016ed8550475998045b81634882 290 SUPERFAMILY SSF52540 1 159 3.95E-8 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02720 21657016ed8550475998045b81634882 290 PIRSF PIRSF005052 1 288 6.8E-108 T 09-03-2017 IPR005337 RapZ-like family GO:0005524 NA29_RS02720 21657016ed8550475998045b81634882 290 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 286 39.943 T 09-03-2017 IPR005337 RapZ-like family GO:0005524 NA29_RS02720 21657016ed8550475998045b81634882 290 Pfam PF03668 P-loop ATPase protein family 1 284 2.2E-90 T 09-03-2017 IPR005337 RapZ-like family GO:0005524 NA29_RS23500 b2b24b419d32aedb4d53085766217406 226 SUPERFAMILY SSF53850 14 219 3.47E-66 T 09-03-2017 NA29_RS23500 b2b24b419d32aedb4d53085766217406 226 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 14 198 5.7E-59 T 09-03-2017 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 NA29_RS23500 b2b24b419d32aedb4d53085766217406 226 Pfam PF01634 ATP phosphoribosyltransferase 63 218 4.7E-49 T 09-03-2017 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 NA29_RS23500 b2b24b419d32aedb4d53085766217406 226 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 13 223 56.138 T 09-03-2017 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 NA29_RS23500 b2b24b419d32aedb4d53085766217406 226 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 158 179 - T 09-03-2017 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 NA29_RS23500 b2b24b419d32aedb4d53085766217406 226 Gene3D G3DSA:3.40.190.10 13 157 1.1E-43 T 09-03-2017 NA29_RS23125 81a4ceba2446ec732a9bc8184ad46208 613 Pfam PF08479 POTRA domain, ShlB-type 111 187 1.5E-18 T 09-03-2017 IPR013686 Polypeptide-transport-associated, ShlB-type NA29_RS23125 81a4ceba2446ec732a9bc8184ad46208 613 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 221 576 2.0E-28 T 09-03-2017 IPR005565 Haemolysin activator HlyB NA29_RS23125 81a4ceba2446ec732a9bc8184ad46208 613 PIRSF PIRSF029745 18 612 8.2E-140 T 09-03-2017 IPR027282 Two partner secretion pathway transporter GO:0015031 NA29_RS23125 81a4ceba2446ec732a9bc8184ad46208 613 Gene3D G3DSA:3.10.20.310 106 187 2.0E-22 T 09-03-2017 NA29_RS23125 81a4ceba2446ec732a9bc8184ad46208 613 Gene3D G3DSA:2.40.160.50 237 611 2.3E-80 T 09-03-2017 NA29_RS07765 51f3d12d295504c7911c1a8d45c9bc1b 266 Gene3D G3DSA:3.40.1410.10 92 244 2.7E-38 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain NA29_RS07765 51f3d12d295504c7911c1a8d45c9bc1b 266 Pfam PF07702 UTRA domain 103 240 5.1E-31 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 NA29_RS07765 51f3d12d295504c7911c1a8d45c9bc1b 266 SMART SM00345 13 71 1.4E-6 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS07765 51f3d12d295504c7911c1a8d45c9bc1b 266 SMART SM00866 102 240 3.2E-30 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 NA29_RS07765 51f3d12d295504c7911c1a8d45c9bc1b 266 Gene3D G3DSA:1.10.10.10 7 69 2.1E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07765 51f3d12d295504c7911c1a8d45c9bc1b 266 SUPERFAMILY SSF64288 59 246 1.57E-35 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain NA29_RS07765 51f3d12d295504c7911c1a8d45c9bc1b 266 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 8.8E-8 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS07765 51f3d12d295504c7911c1a8d45c9bc1b 266 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 8.8E-8 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS07765 51f3d12d295504c7911c1a8d45c9bc1b 266 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 69 4.4E-12 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS07765 51f3d12d295504c7911c1a8d45c9bc1b 266 SUPERFAMILY SSF46785 6 70 7.68E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14130 9b69d6a46061bde533604d4515409aaf 400 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 396 2.6E-169 T 09-03-2017 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 NA29_RS14130 9b69d6a46061bde533604d4515409aaf 400 SUPERFAMILY SSF52440 3 113 7.77E-32 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS14130 9b69d6a46061bde533604d4515409aaf 400 SUPERFAMILY SSF51246 326 396 1.35E-18 T 09-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 NA29_RS14130 9b69d6a46061bde533604d4515409aaf 400 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 398 50.522 T 09-03-2017 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 NA29_RS14130 9b69d6a46061bde533604d4515409aaf 400 Gene3D G3DSA:3.30.1490.20 124 200 1.9E-26 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NA29_RS14130 9b69d6a46061bde533604d4515409aaf 400 SUPERFAMILY SSF56059 114 321 6.54E-55 T 09-03-2017 NA29_RS14130 9b69d6a46061bde533604d4515409aaf 400 Gene3D G3DSA:3.30.470.20 201 395 6.9E-69 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS14130 9b69d6a46061bde533604d4515409aaf 400 Pfam PF02222 ATP-grasp domain 124 301 3.9E-50 T 09-03-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type NA29_RS14130 9b69d6a46061bde533604d4515409aaf 400 Gene3D G3DSA:3.40.50.20 4 121 5.9E-38 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS05375 21bc816e8348f7c1f92f525d141f03fe 459 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 39 458 9.2E-114 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 NA29_RS05375 21bc816e8348f7c1f92f525d141f03fe 459 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 408 424 - T 09-03-2017 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 NA29_RS05375 21bc816e8348f7c1f92f525d141f03fe 459 Pfam PF00939 Sodium:sulfate symporter transmembrane region 25 458 4.8E-53 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 NA29_RS16065 738c9fa6b6836a5dcdf04fa42c34348f 348 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 55 6.2E-13 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 NA29_RS16065 738c9fa6b6836a5dcdf04fa42c34348f 348 SUPERFAMILY SSF47413 8 66 7.97E-15 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS16065 738c9fa6b6836a5dcdf04fa42c34348f 348 Gene3D G3DSA:3.40.50.2300 61 175 2.5E-27 T 09-03-2017 NA29_RS16065 738c9fa6b6836a5dcdf04fa42c34348f 348 SMART SM00354 8 78 2.2E-16 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 NA29_RS16065 738c9fa6b6836a5dcdf04fa42c34348f 348 Pfam PF13377 Periplasmic binding protein-like domain 175 347 4.8E-27 T 09-03-2017 NA29_RS16065 738c9fa6b6836a5dcdf04fa42c34348f 348 Gene3D G3DSA:1.10.260.40 9 60 6.3E-20 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS16065 738c9fa6b6836a5dcdf04fa42c34348f 348 Gene3D G3DSA:3.40.50.2300 176 348 9.0E-37 T 09-03-2017 NA29_RS16065 738c9fa6b6836a5dcdf04fa42c34348f 348 SUPERFAMILY SSF53822 68 348 6.85E-49 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS22895 92b8147da7a55b74c5e9114a9177d6db 152 Gene3D G3DSA:3.40.630.30 3 141 3.4E-29 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS22895 92b8147da7a55b74c5e9114a9177d6db 152 Pfam PF00583 Acetyltransferase (GNAT) family 55 135 2.3E-14 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS22895 92b8147da7a55b74c5e9114a9177d6db 152 SUPERFAMILY SSF55729 1 140 7.15E-26 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS10920 8d41af05deb9c3a1d225cf6a8bbba363 789 SUPERFAMILY SSF56935 62 789 7.56E-113 T 09-03-2017 NA29_RS10920 8d41af05deb9c3a1d225cf6a8bbba363 789 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 75 789 2.0E-78 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NA29_RS10920 8d41af05deb9c3a1d225cf6a8bbba363 789 Gene3D G3DSA:2.170.130.10 55 179 4.1E-30 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS10920 8d41af05deb9c3a1d225cf6a8bbba363 789 Pfam PF00593 TonB dependent receptor 523 786 4.6E-28 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS10920 8d41af05deb9c3a1d225cf6a8bbba363 789 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 772 789 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site NA29_RS10920 8d41af05deb9c3a1d225cf6a8bbba363 789 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 172 1.7E-17 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS10920 8d41af05deb9c3a1d225cf6a8bbba363 789 Gene3D G3DSA:2.40.170.20 190 789 6.0E-128 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS23945 4e2af8120fa0e5ffe42cb48c629dd685 1132 SMART SM00869 861 1119 9.3E-34 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS23945 4e2af8120fa0e5ffe42cb48c629dd685 1132 SUPERFAMILY SSF51126 279 454 2.42E-23 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS23945 4e2af8120fa0e5ffe42cb48c629dd685 1132 SUPERFAMILY SSF51126 503 758 2.42E-23 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS23945 4e2af8120fa0e5ffe42cb48c629dd685 1132 Gene3D G3DSA:2.40.128.130 816 1132 6.8E-59 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS23945 4e2af8120fa0e5ffe42cb48c629dd685 1132 Pfam PF03797 Autotransporter beta-domain 861 1114 6.7E-38 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS23945 4e2af8120fa0e5ffe42cb48c629dd685 1132 SUPERFAMILY SSF103515 829 1132 3.79E-41 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS23945 4e2af8120fa0e5ffe42cb48c629dd685 1132 SMART SM00710 422 444 5200.0 T 09-03-2017 IPR006626 Parallel beta-helix repeat NA29_RS23945 4e2af8120fa0e5ffe42cb48c629dd685 1132 SMART SM00710 188 215 25.0 T 09-03-2017 IPR006626 Parallel beta-helix repeat NA29_RS23945 4e2af8120fa0e5ffe42cb48c629dd685 1132 SMART SM00710 296 322 1800.0 T 09-03-2017 IPR006626 Parallel beta-helix repeat NA29_RS23945 4e2af8120fa0e5ffe42cb48c629dd685 1132 SMART SM00710 527 549 1900.0 T 09-03-2017 IPR006626 Parallel beta-helix repeat NA29_RS23945 4e2af8120fa0e5ffe42cb48c629dd685 1132 SMART SM00710 551 572 1100.0 T 09-03-2017 IPR006626 Parallel beta-helix repeat NA29_RS23945 4e2af8120fa0e5ffe42cb48c629dd685 1132 Gene3D G3DSA:2.160.20.20 532 784 1.2E-31 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS23945 4e2af8120fa0e5ffe42cb48c629dd685 1132 Gene3D G3DSA:2.160.20.20 97 274 2.8E-4 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS23945 4e2af8120fa0e5ffe42cb48c629dd685 1132 Gene3D G3DSA:2.160.20.20 279 454 1.2E-31 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS23945 4e2af8120fa0e5ffe42cb48c629dd685 1132 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 644 1132 4.7E-55 T 09-03-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 NA29_RS22945 7007fc210d1f626dcda3977f9a1dce31 545 SUPERFAMILY SSF51011 450 540 1.15E-7 T 09-03-2017 NA29_RS22945 7007fc210d1f626dcda3977f9a1dce31 545 Gene3D G3DSA:2.60.40.1180 448 540 2.0E-5 T 09-03-2017 IPR013780 Glycosyl hydrolase, all-beta NA29_RS22945 7007fc210d1f626dcda3977f9a1dce31 545 SUPERFAMILY SSF51445 54 130 7.35E-30 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily NA29_RS22945 7007fc210d1f626dcda3977f9a1dce31 545 SUPERFAMILY SSF51445 297 322 7.35E-30 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily NA29_RS22945 7007fc210d1f626dcda3977f9a1dce31 545 SUPERFAMILY SSF51445 175 267 7.35E-30 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily NA29_RS22945 7007fc210d1f626dcda3977f9a1dce31 545 SUPERFAMILY SSF51445 349 427 7.35E-30 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily NA29_RS22945 7007fc210d1f626dcda3977f9a1dce31 545 Gene3D G3DSA:3.20.20.80 177 405 1.2E-18 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NA29_RS22945 7007fc210d1f626dcda3977f9a1dce31 545 Gene3D G3DSA:3.20.20.80 88 145 1.2E-18 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NA29_RS22945 7007fc210d1f626dcda3977f9a1dce31 545 Pfam PF12891 Glycoside hydrolase family 44 83 323 1.3E-53 T 09-03-2017 IPR024745 Glycoside hydrolase, family 44 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 NA29_RS08175 a2489adfc42931e9b53930c9d44b2434 398 Gene3D G3DSA:3.10.310.10 2 198 7.3E-91 T 09-03-2017 NA29_RS08175 a2489adfc42931e9b53930c9d44b2434 398 Pfam PF04303 PrpF protein 6 394 9.2E-177 T 09-03-2017 IPR007400 PrpF protein NA29_RS08175 a2489adfc42931e9b53930c9d44b2434 398 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 5 398 3.1E-230 T 09-03-2017 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 NA29_RS08175 a2489adfc42931e9b53930c9d44b2434 398 SUPERFAMILY SSF54506 2 182 5.34E-72 T 09-03-2017 NA29_RS08175 a2489adfc42931e9b53930c9d44b2434 398 SUPERFAMILY SSF54506 192 396 1.19E-77 T 09-03-2017 NA29_RS08175 a2489adfc42931e9b53930c9d44b2434 398 Gene3D G3DSA:3.10.310.10 199 377 1.2E-81 T 09-03-2017 NA29_RS01685 b316fd83c41a5d2a2e2b9631d263d2ad 298 SUPERFAMILY SSF46785 4 86 5.89E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01685 b316fd83c41a5d2a2e2b9631d263d2ad 298 Gene3D G3DSA:3.40.190.10 92 176 1.2E-26 T 09-03-2017 NA29_RS01685 b316fd83c41a5d2a2e2b9631d263d2ad 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.7E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01685 b316fd83c41a5d2a2e2b9631d263d2ad 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.8E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01685 b316fd83c41a5d2a2e2b9631d263d2ad 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.8E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01685 b316fd83c41a5d2a2e2b9631d263d2ad 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.8E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01685 b316fd83c41a5d2a2e2b9631d263d2ad 298 Pfam PF03466 LysR substrate binding domain 88 291 1.4E-50 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS01685 b316fd83c41a5d2a2e2b9631d263d2ad 298 Gene3D G3DSA:3.40.190.10 177 257 3.7E-10 T 09-03-2017 NA29_RS01685 b316fd83c41a5d2a2e2b9631d263d2ad 298 Gene3D G3DSA:1.10.10.10 4 80 1.5E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01685 b316fd83c41a5d2a2e2b9631d263d2ad 298 SUPERFAMILY SSF53850 90 292 1.1E-52 T 09-03-2017 NA29_RS11265 6a26de59e20f2b3f281e2529d67d0e22 217 SMART SM00345 9 67 4.5E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS11265 6a26de59e20f2b3f281e2529d67d0e22 217 SUPERFAMILY SSF46785 4 71 4.7E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11265 6a26de59e20f2b3f281e2529d67d0e22 217 Gene3D G3DSA:1.10.10.10 3 68 8.1E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11265 6a26de59e20f2b3f281e2529d67d0e22 217 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 66 1.5E-14 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS11265 6a26de59e20f2b3f281e2529d67d0e22 217 SUPERFAMILY SSF48008 73 201 3.14E-22 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS11265 6a26de59e20f2b3f281e2529d67d0e22 217 Gene3D G3DSA:1.20.120.530 70 212 2.5E-25 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS11265 6a26de59e20f2b3f281e2529d67d0e22 217 SMART SM00895 77 201 1.3E-16 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS11265 6a26de59e20f2b3f281e2529d67d0e22 217 Pfam PF07729 FCD domain 77 200 1.4E-21 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS19525 15e09629a5fec32d12c344a1c8ee0457 583 SMART SM00382 367 552 6.7E-20 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS19525 15e09629a5fec32d12c344a1c8ee0457 583 Gene3D G3DSA:1.20.1560.10 13 324 2.6E-75 T 09-03-2017 NA29_RS19525 15e09629a5fec32d12c344a1c8ee0457 583 Pfam PF00664 ABC transporter transmembrane region 28 296 4.2E-50 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NA29_RS19525 15e09629a5fec32d12c344a1c8ee0457 583 SUPERFAMILY SSF52540 334 577 7.99E-91 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19525 15e09629a5fec32d12c344a1c8ee0457 583 Pfam PF00005 ABC transporter 358 506 2.4E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS19525 15e09629a5fec32d12c344a1c8ee0457 583 SUPERFAMILY SSF90123 10 326 7.06E-77 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NA29_RS19525 15e09629a5fec32d12c344a1c8ee0457 583 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 13 578 2.5E-243 T 09-03-2017 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 NA29_RS19525 15e09629a5fec32d12c344a1c8ee0457 583 Gene3D G3DSA:3.40.50.300 341 570 5.7E-80 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19525 15e09629a5fec32d12c344a1c8ee0457 583 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS12385 aeb8a1f3b9f47d134e2c908d760ef201 219 SMART SM00448 1 112 8.2E-36 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS12385 aeb8a1f3b9f47d134e2c908d760ef201 219 Gene3D G3DSA:3.40.50.2300 1 120 4.2E-37 T 09-03-2017 NA29_RS12385 aeb8a1f3b9f47d134e2c908d760ef201 219 SMART SM00862 146 216 9.3E-15 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS12385 aeb8a1f3b9f47d134e2c908d760ef201 219 Pfam PF00072 Response regulator receiver domain 3 112 4.3E-25 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS12385 aeb8a1f3b9f47d134e2c908d760ef201 219 SUPERFAMILY SSF52172 1 175 9.53E-39 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS12385 aeb8a1f3b9f47d134e2c908d760ef201 219 Gene3D G3DSA:1.10.10.10 125 215 2.6E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12385 aeb8a1f3b9f47d134e2c908d760ef201 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 214 3.0E-15 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 Pfam PF08448 PAS fold 207 301 1.7E-6 T 09-03-2017 IPR013656 PAS fold-4 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 SUPERFAMILY SSF55785 197 296 6.46E-11 T 09-03-2017 IPR000014 PAS domain NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 415 430 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 Gene3D G3DSA:1.10.8.60 502 556 8.6E-17 T 09-03-2017 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 Gene3D G3DSA:3.40.50.10660 88 174 1.1E-25 T 09-03-2017 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 SUPERFAMILY SSF46689 544 582 1.61E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 SUPERFAMILY SSF46689 617 665 1.61E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 SMART SM00382 348 493 1.3E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 SUPERFAMILY SSF159800 4 191 2.35E-43 T 09-03-2017 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 Pfam PF06506 Propionate catabolism activator 26 194 6.0E-45 T 09-03-2017 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 Gene3D G3DSA:1.10.10.60 557 575 7.0E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 Gene3D G3DSA:1.10.10.60 615 665 7.0E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 2 666 6.5E-190 T 09-03-2017 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0005737|GO:0019629 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 198 267 1.6E-6 T 09-03-2017 IPR000014 PAS domain NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 Gene3D G3DSA:3.40.50.2300 2 87 3.5E-33 T 09-03-2017 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 352 365 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 544 553 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 Gene3D G3DSA:3.40.50.300 325 501 1.4E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 SMART SM00091 201 267 1.0E-7 T 09-03-2017 IPR000014 PAS domain NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 Gene3D G3DSA:3.30.450.20 201 312 1.1E-11 T 09-03-2017 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 Pfam PF00158 Sigma-54 interaction domain 328 494 1.0E-67 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 Pfam PF02954 Bacterial regulatory protein, Fis family 631 665 3.4E-9 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS08155 4ac23e69f6edbc01e54c18380d83faf1 667 SUPERFAMILY SSF52540 327 563 1.74E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14635 f99634e953699aa447ca01f322e0c7c4 322 Gene3D G3DSA:3.90.226.10 58 272 4.6E-49 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS14635 f99634e953699aa447ca01f322e0c7c4 322 SUPERFAMILY SSF52096 5 316 1.55E-101 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS14635 f99634e953699aa447ca01f322e0c7c4 322 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 4.8E-69 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 NA29_RS14635 f99634e953699aa447ca01f322e0c7c4 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 2.4E-47 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 NA29_RS14635 f99634e953699aa447ca01f322e0c7c4 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 2.4E-47 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 NA29_RS14635 f99634e953699aa447ca01f322e0c7c4 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 2.4E-47 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 NA29_RS14635 f99634e953699aa447ca01f322e0c7c4 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 2.4E-47 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 NA29_RS14635 f99634e953699aa447ca01f322e0c7c4 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 2.4E-47 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 NA29_RS14635 f99634e953699aa447ca01f322e0c7c4 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 2.4E-47 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 NA29_RS14635 f99634e953699aa447ca01f322e0c7c4 322 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 50.307 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 NA29_RS14635 f99634e953699aa447ca01f322e0c7c4 322 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 318 5.6E-153 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 NA29_RS11950 31bcb515c2f524cc91e3c81d3432bd6c 308 SUPERFAMILY SSF46785 2 83 1.61E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11950 31bcb515c2f524cc91e3c81d3432bd6c 308 Pfam PF03466 LysR substrate binding domain 94 302 2.1E-19 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS11950 31bcb515c2f524cc91e3c81d3432bd6c 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.2E-12 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11950 31bcb515c2f524cc91e3c81d3432bd6c 308 Gene3D G3DSA:3.40.190.10 171 273 4.0E-25 T 09-03-2017 NA29_RS11950 31bcb515c2f524cc91e3c81d3432bd6c 308 Gene3D G3DSA:1.10.10.10 1 84 3.5E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11950 31bcb515c2f524cc91e3c81d3432bd6c 308 Gene3D G3DSA:3.40.190.10 89 170 6.3E-25 T 09-03-2017 NA29_RS11950 31bcb515c2f524cc91e3c81d3432bd6c 308 Gene3D G3DSA:3.40.190.10 277 304 6.3E-25 T 09-03-2017 NA29_RS11950 31bcb515c2f524cc91e3c81d3432bd6c 308 SUPERFAMILY SSF53850 89 300 1.81E-34 T 09-03-2017 NA29_RS18175 de4d5be376bb4e43b6603a4f11cbc269 181 SUPERFAMILY SSF52833 9 180 4.48E-49 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS18175 de4d5be376bb4e43b6603a4f11cbc269 181 Pfam PF00255 Glutathione peroxidase 8 111 6.4E-33 T 09-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 NA29_RS18175 de4d5be376bb4e43b6603a4f11cbc269 181 PRINTS PR01011 Glutathione peroxidase family signature 23 40 3.2E-17 T 09-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 NA29_RS18175 de4d5be376bb4e43b6603a4f11cbc269 181 PRINTS PR01011 Glutathione peroxidase family signature 141 150 3.2E-17 T 09-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 NA29_RS18175 de4d5be376bb4e43b6603a4f11cbc269 181 PRINTS PR01011 Glutathione peroxidase family signature 58 74 3.2E-17 T 09-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 NA29_RS18175 de4d5be376bb4e43b6603a4f11cbc269 181 PIRSF PIRSF000303 1 181 5.2E-54 T 09-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 NA29_RS18175 de4d5be376bb4e43b6603a4f11cbc269 181 Gene3D G3DSA:3.40.30.10 7 180 1.2E-56 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS07230 7104f6b77fbf7a8009194b35e8fc95d1 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 1.7E-5 T 09-03-2017 NA29_RS07230 7104f6b77fbf7a8009194b35e8fc95d1 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 248 6.9E-69 T 09-03-2017 NA29_RS07230 7104f6b77fbf7a8009194b35e8fc95d1 255 Gene3D G3DSA:3.40.50.720 1 250 2.4E-89 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS07230 7104f6b77fbf7a8009194b35e8fc95d1 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS07230 7104f6b77fbf7a8009194b35e8fc95d1 255 SUPERFAMILY SSF51735 4 249 5.0E-86 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS07230 7104f6b77fbf7a8009194b35e8fc95d1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.2E-44 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07230 7104f6b77fbf7a8009194b35e8fc95d1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.2E-44 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07230 7104f6b77fbf7a8009194b35e8fc95d1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.2E-44 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07230 7104f6b77fbf7a8009194b35e8fc95d1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.2E-44 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07230 7104f6b77fbf7a8009194b35e8fc95d1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.2E-44 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07230 7104f6b77fbf7a8009194b35e8fc95d1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.2E-44 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07230 7104f6b77fbf7a8009194b35e8fc95d1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 7.3E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07230 7104f6b77fbf7a8009194b35e8fc95d1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.3E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07230 7104f6b77fbf7a8009194b35e8fc95d1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 7.3E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS05565 884a09e800804f6169dba7783c596db2 401 Pfam PF00162 Phosphoglycerate kinase 15 385 1.6E-138 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS05565 884a09e800804f6169dba7783c596db2 401 Gene3D G3DSA:3.40.50.1260 12 181 7.0E-63 T 09-03-2017 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS05565 884a09e800804f6169dba7783c596db2 401 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 9 395 38.922 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS05565 884a09e800804f6169dba7783c596db2 401 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 20 30 - T 09-03-2017 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS05565 884a09e800804f6169dba7783c596db2 401 SUPERFAMILY SSF53748 14 395 1.18E-140 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS05565 884a09e800804f6169dba7783c596db2 401 Gene3D G3DSA:3.40.50.1270 182 383 5.1E-83 T 09-03-2017 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS05565 884a09e800804f6169dba7783c596db2 401 PRINTS PR00477 Phosphoglycerate kinase family signature 315 340 3.1E-78 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS05565 884a09e800804f6169dba7783c596db2 401 PRINTS PR00477 Phosphoglycerate kinase family signature 111 126 3.1E-78 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS05565 884a09e800804f6169dba7783c596db2 401 PRINTS PR00477 Phosphoglycerate kinase family signature 193 212 3.1E-78 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS05565 884a09e800804f6169dba7783c596db2 401 PRINTS PR00477 Phosphoglycerate kinase family signature 15 31 3.1E-78 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS05565 884a09e800804f6169dba7783c596db2 401 PRINTS PR00477 Phosphoglycerate kinase family signature 371 388 3.1E-78 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS05565 884a09e800804f6169dba7783c596db2 401 PRINTS PR00477 Phosphoglycerate kinase family signature 348 359 3.1E-78 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS05565 884a09e800804f6169dba7783c596db2 401 PRINTS PR00477 Phosphoglycerate kinase family signature 37 59 3.1E-78 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS05565 884a09e800804f6169dba7783c596db2 401 PRINTS PR00477 Phosphoglycerate kinase family signature 170 192 3.1E-78 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS05565 884a09e800804f6169dba7783c596db2 401 PRINTS PR00477 Phosphoglycerate kinase family signature 139 161 3.1E-78 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS05565 884a09e800804f6169dba7783c596db2 401 PIRSF PIRSF000724 3 401 1.9E-137 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS24155 79084a491b045ff447ce13089ec3c72f 319 Gene3D G3DSA:1.10.10.60 220 266 1.1E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS24155 79084a491b045ff447ce13089ec3c72f 319 Gene3D G3DSA:1.10.10.60 267 314 5.2E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS24155 79084a491b045ff447ce13089ec3c72f 319 Pfam PF12833 Helix-turn-helix domain 235 314 2.2E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS24155 79084a491b045ff447ce13089ec3c72f 319 SUPERFAMILY SSF46689 213 262 3.85E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS24155 79084a491b045ff447ce13089ec3c72f 319 SMART SM00342 229 312 4.9E-26 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS24155 79084a491b045ff447ce13089ec3c72f 319 SUPERFAMILY SSF46689 266 315 3.49E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS24155 79084a491b045ff447ce13089ec3c72f 319 Pfam PF01965 DJ-1/PfpI family 1 174 6.3E-29 T 09-03-2017 IPR002818 DJ-1/PfpI NA29_RS24155 79084a491b045ff447ce13089ec3c72f 319 Gene3D G3DSA:3.40.50.880 1 219 1.5E-62 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS24155 79084a491b045ff447ce13089ec3c72f 319 SUPERFAMILY SSF52317 1 193 1.74E-54 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS07115 dc9656163fe7c7245b1cc8baa575034c 465 Gene3D G3DSA:3.30.70.360 215 365 9.9E-34 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS07115 dc9656163fe7c7245b1cc8baa575034c 465 Pfam PF01546 Peptidase family M20/M25/M40 89 450 5.9E-22 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NA29_RS07115 dc9656163fe7c7245b1cc8baa575034c 465 SUPERFAMILY SSF53187 369 455 6.0E-51 T 09-03-2017 NA29_RS07115 dc9656163fe7c7245b1cc8baa575034c 465 SUPERFAMILY SSF53187 12 205 6.0E-51 T 09-03-2017 NA29_RS07115 dc9656163fe7c7245b1cc8baa575034c 465 Gene3D G3DSA:3.40.630.10 17 214 6.1E-50 T 09-03-2017 NA29_RS07115 dc9656163fe7c7245b1cc8baa575034c 465 Gene3D G3DSA:3.40.630.10 394 455 6.1E-50 T 09-03-2017 NA29_RS07115 dc9656163fe7c7245b1cc8baa575034c 465 Pfam PF07687 Peptidase dimerisation domain 203 354 1.3E-8 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS01170 cbd1a7b289490c4f19a42609f9f53cab 455 SUPERFAMILY SSF103473 31 453 1.06E-57 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS01170 cbd1a7b289490c4f19a42609f9f53cab 455 Gene3D G3DSA:1.20.1250.20 264 451 1.0E-14 T 09-03-2017 NA29_RS01170 cbd1a7b289490c4f19a42609f9f53cab 455 Pfam PF07690 Major Facilitator Superfamily 47 391 4.1E-23 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS01170 cbd1a7b289490c4f19a42609f9f53cab 455 Gene3D G3DSA:1.20.1250.20 40 247 4.7E-20 T 09-03-2017 NA29_RS16125 de585813035c37af005ce19946d5bc67 252 Pfam PF00455 DeoR C terminal sensor domain 74 231 3.9E-37 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain NA29_RS16125 de585813035c37af005ce19946d5bc67 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.3E-9 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NA29_RS16125 de585813035c37af005ce19946d5bc67 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.3E-9 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NA29_RS16125 de585813035c37af005ce19946d5bc67 252 Gene3D G3DSA:1.10.10.10 1 59 5.2E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16125 de585813035c37af005ce19946d5bc67 252 SMART SM00420 6 58 5.7E-15 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NA29_RS16125 de585813035c37af005ce19946d5bc67 252 SUPERFAMILY SSF46785 2 74 1.34E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16125 de585813035c37af005ce19946d5bc67 252 SUPERFAMILY SSF100950 74 234 1.33E-21 T 09-03-2017 NA29_RS16125 de585813035c37af005ce19946d5bc67 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 5.5E-17 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NA29_RS16125 de585813035c37af005ce19946d5bc67 252 SMART SM01134 72 233 1.9E-48 T 09-03-2017 NA29_RS16125 de585813035c37af005ce19946d5bc67 252 Gene3D G3DSA:3.30.750.70 78 127 6.5E-11 T 09-03-2017 NA29_RS18285 9819539b672b454bd5eae318cfa81594 233 Gene3D G3DSA:1.10.10.10 7 93 5.8E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18285 9819539b672b454bd5eae318cfa81594 233 SUPERFAMILY SSF46785 11 91 9.09E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18285 9819539b672b454bd5eae318cfa81594 233 Pfam PF12840 Helix-turn-helix domain 14 72 5.6E-7 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18285 9819539b672b454bd5eae318cfa81594 233 SMART SM00418 13 92 9.1E-10 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS20895 7c48106d2cc2026833aba8448a491218 343 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 221 3.8E-71 T 09-03-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 NA29_RS20895 7c48106d2cc2026833aba8448a491218 343 Pfam PF00035 Double-stranded RNA binding motif 155 221 9.4E-12 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain NA29_RS20895 7c48106d2cc2026833aba8448a491218 343 SUPERFAMILY SSF54768 108 228 8.01E-26 T 09-03-2017 NA29_RS20895 7c48106d2cc2026833aba8448a491218 343 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 NA29_RS20895 7c48106d2cc2026833aba8448a491218 343 SUPERFAMILY SSF69065 2 155 6.63E-48 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 NA29_RS20895 7c48106d2cc2026833aba8448a491218 343 Gene3D G3DSA:1.10.1520.10 4 147 1.1E-46 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 NA29_RS20895 7c48106d2cc2026833aba8448a491218 343 SMART SM00358 155 223 4.0E-16 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain NA29_RS20895 7c48106d2cc2026833aba8448a491218 343 Pfam PF14622 Ribonuclease-III-like 18 139 4.1E-35 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 NA29_RS20895 7c48106d2cc2026833aba8448a491218 343 Gene3D G3DSA:3.30.160.20 152 222 7.6E-25 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain NA29_RS20895 7c48106d2cc2026833aba8448a491218 343 SMART SM00535 20 148 8.2E-50 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 NA29_RS20895 7c48106d2cc2026833aba8448a491218 343 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 28.966 T 09-03-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 NA29_RS02820 8190134cf06704cd51ff42eeea5f5ed4 267 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 13 265 8.9E-113 T 09-03-2017 IPR012700 Phosphonate C-P lyase system, PhnK NA29_RS02820 8190134cf06704cd51ff42eeea5f5ed4 267 Gene3D G3DSA:3.40.50.300 8 264 1.0E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02820 8190134cf06704cd51ff42eeea5f5ed4 267 Pfam PF00005 ABC transporter 33 189 5.5E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS02820 8190134cf06704cd51ff42eeea5f5ed4 267 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS02820 8190134cf06704cd51ff42eeea5f5ed4 267 PIRSF PIRSF037116 4 267 3.3E-137 T 09-03-2017 IPR012700 Phosphonate C-P lyase system, PhnK NA29_RS02820 8190134cf06704cd51ff42eeea5f5ed4 267 SUPERFAMILY SSF52540 9 263 1.01E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02820 8190134cf06704cd51ff42eeea5f5ed4 267 SMART SM00382 40 238 1.1E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS20470 65ab39630e9319f1ae7f49bf66963cca 295 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 41 186 1.0E-18 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NA29_RS20470 65ab39630e9319f1ae7f49bf66963cca 295 SUPERFAMILY SSF55846 37 195 6.15E-42 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NA29_RS20470 65ab39630e9319f1ae7f49bf66963cca 295 Pfam PF01471 Putative peptidoglycan binding domain 220 274 8.6E-8 T 09-03-2017 IPR002477 Peptidoglycan binding-like NA29_RS20470 65ab39630e9319f1ae7f49bf66963cca 295 SUPERFAMILY SSF47090 214 282 3.92E-15 T 09-03-2017 IPR002477 Peptidoglycan binding-like NA29_RS20470 65ab39630e9319f1ae7f49bf66963cca 295 SMART SM00644 32 185 2.0E-23 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NA29_RS20470 65ab39630e9319f1ae7f49bf66963cca 295 Gene3D G3DSA:1.10.101.10 220 277 8.3E-5 T 09-03-2017 IPR002477 Peptidoglycan binding-like NA29_RS20470 65ab39630e9319f1ae7f49bf66963cca 295 Gene3D G3DSA:3.40.80.10 35 204 1.9E-47 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NA29_RS06105 345e0a0d1d92108945c50f54b407d75d 233 SUPERFAMILY SSF46894 156 229 1.94E-17 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS06105 345e0a0d1d92108945c50f54b407d75d 233 SMART SM00421 172 229 2.2E-17 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS06105 345e0a0d1d92108945c50f54b407d75d 233 Pfam PF00196 Bacterial regulatory proteins, luxR family 173 226 1.6E-17 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS06105 345e0a0d1d92108945c50f54b407d75d 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 189 5.3E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS06105 345e0a0d1d92108945c50f54b407d75d 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 205 5.3E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS06105 345e0a0d1d92108945c50f54b407d75d 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 205 217 5.3E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS06105 345e0a0d1d92108945c50f54b407d75d 233 SUPERFAMILY SSF75516 4 166 2.09E-35 T 09-03-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain NA29_RS06105 345e0a0d1d92108945c50f54b407d75d 233 Gene3D G3DSA:1.10.10.10 178 229 9.2E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06105 345e0a0d1d92108945c50f54b407d75d 233 Gene3D G3DSA:3.30.450.80 5 177 3.7E-35 T 09-03-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain NA29_RS06105 345e0a0d1d92108945c50f54b407d75d 233 Pfam PF03472 Autoinducer binding domain 17 158 9.0E-29 T 09-03-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain NA29_RS10245 1850c80a40e916cde98273dad25de818 802 ProSitePatterns PS00211 ABC transporters family signature. 669 683 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS10245 1850c80a40e916cde98273dad25de818 802 SUPERFAMILY SSF52540 523 767 1.13E-91 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10245 1850c80a40e916cde98273dad25de818 802 SUPERFAMILY SSF90123 198 512 9.81E-78 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NA29_RS10245 1850c80a40e916cde98273dad25de818 802 Pfam PF00664 ABC transporter transmembrane region 211 484 7.2E-46 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NA29_RS10245 1850c80a40e916cde98273dad25de818 802 Gene3D G3DSA:3.40.50.300 532 762 7.9E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10245 1850c80a40e916cde98273dad25de818 802 Pfam PF00005 ABC transporter 550 697 3.9E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS10245 1850c80a40e916cde98273dad25de818 802 SMART SM00382 557 743 4.6E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS10245 1850c80a40e916cde98273dad25de818 802 Gene3D G3DSA:1.20.1560.10 198 512 1.1E-83 T 09-03-2017 NA29_RS11830 fe62aed658151facdc24f69be565efbf 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 256 1.3E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS11830 fe62aed658151facdc24f69be565efbf 270 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 23 268 8.0E-80 T 09-03-2017 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 NA29_RS11830 fe62aed658151facdc24f69be565efbf 270 SUPERFAMILY SSF161098 78 260 7.98E-31 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS11830 fe62aed658151facdc24f69be565efbf 270 Gene3D G3DSA:1.10.3720.10 76 265 1.1E-21 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS08645 12f022b9e7e302a003a58986a7f8794a 657 Gene3D G3DSA:2.30.38.10 406 465 7.1E-17 T 09-03-2017 NA29_RS08645 12f022b9e7e302a003a58986a7f8794a 657 Pfam PF00501 AMP-binding enzyme 14 471 2.0E-90 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS08645 12f022b9e7e302a003a58986a7f8794a 657 Gene3D G3DSA:3.40.50.980 192 284 1.3E-26 T 09-03-2017 NA29_RS08645 12f022b9e7e302a003a58986a7f8794a 657 Gene3D G3DSA:3.40.50.980 338 398 1.3E-26 T 09-03-2017 NA29_RS08645 12f022b9e7e302a003a58986a7f8794a 657 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS08645 12f022b9e7e302a003a58986a7f8794a 657 SUPERFAMILY SSF56801 341 605 1.96E-111 T 09-03-2017 NA29_RS08645 12f022b9e7e302a003a58986a7f8794a 657 SUPERFAMILY SSF56801 5 289 1.96E-111 T 09-03-2017 NA29_RS08645 12f022b9e7e302a003a58986a7f8794a 657 Gene3D G3DSA:3.40.50.980 4 191 2.9E-32 T 09-03-2017 NA29_RS17245 117d60102857631d0ddbe74e7a3e2c62 343 Gene3D G3DSA:1.10.287.130 129 182 2.7E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS17245 117d60102857631d0ddbe74e7a3e2c62 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 239 341 5.5E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS17245 117d60102857631d0ddbe74e7a3e2c62 343 SMART SM00387 235 343 2.6E-26 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS17245 117d60102857631d0ddbe74e7a3e2c62 343 SMART SM00388 139 197 3.6E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS17245 117d60102857631d0ddbe74e7a3e2c62 343 Gene3D G3DSA:3.30.565.10 183 342 1.5E-33 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS17245 117d60102857631d0ddbe74e7a3e2c62 343 SUPERFAMILY SSF47384 123 195 1.69E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS17245 117d60102857631d0ddbe74e7a3e2c62 343 SMART SM00304 86 138 7.3E-4 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS17245 117d60102857631d0ddbe74e7a3e2c62 343 Pfam PF00512 His Kinase A (phospho-acceptor) domain 140 192 7.1E-8 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS17245 117d60102857631d0ddbe74e7a3e2c62 343 SUPERFAMILY SSF55874 191 342 9.17E-33 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS17245 117d60102857631d0ddbe74e7a3e2c62 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 322 1.1E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS17245 117d60102857631d0ddbe74e7a3e2c62 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 269 283 1.1E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS17245 117d60102857631d0ddbe74e7a3e2c62 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 297 1.1E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS17245 117d60102857631d0ddbe74e7a3e2c62 343 Pfam PF00672 HAMP domain 78 135 2.2E-6 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS11330 2460ae545ad24b0d7d9993273c174bc5 469 Pfam PF00324 Amino acid permease 27 454 8.2E-92 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 NA29_RS11330 2460ae545ad24b0d7d9993273c174bc5 469 PIRSF PIRSF006060 10 461 3.8E-67 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NA29_RS11330 2460ae545ad24b0d7d9993273c174bc5 469 ProSitePatterns PS00218 Amino acid permeases signature. 51 81 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 NA29_RS12920 7854b45f202f8042977979ad08a75802 116 SUPERFAMILY SSF49472 1 116 1.31E-41 T 09-03-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 NA29_RS12920 7854b45f202f8042977979ad08a75802 116 Pfam PF00576 HIUase/Transthyretin family 4 115 2.1E-36 T 09-03-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 NA29_RS12920 7854b45f202f8042977979ad08a75802 116 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 09-03-2017 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 NA29_RS12920 7854b45f202f8042977979ad08a75802 116 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 116 2.0E-39 T 09-03-2017 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 NA29_RS12920 7854b45f202f8042977979ad08a75802 116 PRINTS PR00189 Transthyretin signature 3 23 8.9E-7 T 09-03-2017 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 NA29_RS12920 7854b45f202f8042977979ad08a75802 116 PRINTS PR00189 Transthyretin signature 94 116 8.9E-7 T 09-03-2017 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 NA29_RS12920 7854b45f202f8042977979ad08a75802 116 Gene3D G3DSA:2.60.40.180 2 116 6.6E-38 T 09-03-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 NA29_RS12920 7854b45f202f8042977979ad08a75802 116 ProSitePatterns PS00769 Transthyretin signature 2. 99 111 - T 09-03-2017 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 NA29_RS07940 bc76f25fb5ef26bdecec904aa9a09a66 284 SUPERFAMILY SSF103481 181 280 2.09E-9 T 09-03-2017 NA29_RS07940 bc76f25fb5ef26bdecec904aa9a09a66 284 SUPERFAMILY SSF103481 35 137 1.44E-8 T 09-03-2017 NA29_RS07940 bc76f25fb5ef26bdecec904aa9a09a66 284 Pfam PF00892 EamA-like transporter family 4 135 7.8E-8 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS11050 2f01a5be370bea75d9c2c457231eeae5 316 SMART SM00382 32 184 1.1E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS11050 2f01a5be370bea75d9c2c457231eeae5 316 Pfam PF00158 Sigma-54 interaction domain 12 178 5.3E-63 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NA29_RS11050 2f01a5be370bea75d9c2c457231eeae5 316 SUPERFAMILY SSF46689 224 311 6.81E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS11050 2f01a5be370bea75d9c2c457231eeae5 316 Gene3D G3DSA:1.10.10.60 235 311 2.4E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS11050 2f01a5be370bea75d9c2c457231eeae5 316 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 224 233 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site NA29_RS11050 2f01a5be370bea75d9c2c457231eeae5 316 Pfam PF02954 Bacterial regulatory protein, Fis family 273 310 1.5E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS11050 2f01a5be370bea75d9c2c457231eeae5 316 Gene3D G3DSA:3.40.50.300 11 184 8.8E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11050 2f01a5be370bea75d9c2c457231eeae5 316 Gene3D G3DSA:1.10.8.60 186 234 1.9E-17 T 09-03-2017 NA29_RS11050 2f01a5be370bea75d9c2c457231eeae5 316 SUPERFAMILY SSF52540 12 243 2.18E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11050 2f01a5be370bea75d9c2c457231eeae5 316 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 98 113 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NA29_RS03780 b751fff6e6ac1ead79f02caea95c5308 497 Gene3D G3DSA:3.40.50.1240 197 336 6.3E-40 T 09-03-2017 IPR029033 Histidine phosphatase superfamily NA29_RS03780 b751fff6e6ac1ead79f02caea95c5308 497 Gene3D G3DSA:3.40.50.1240 82 196 2.1E-63 T 09-03-2017 IPR029033 Histidine phosphatase superfamily NA29_RS03780 b751fff6e6ac1ead79f02caea95c5308 497 Gene3D G3DSA:3.40.50.1240 338 492 2.1E-63 T 09-03-2017 IPR029033 Histidine phosphatase superfamily NA29_RS03780 b751fff6e6ac1ead79f02caea95c5308 497 SUPERFAMILY SSF53254 80 488 3.36E-54 T 09-03-2017 IPR029033 Histidine phosphatase superfamily NA29_RS13240 d119b39893e3fc06ef695d20b35ac436 237 Pfam PF00696 Amino acid kinase family 6 215 3.8E-32 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase NA29_RS13240 d119b39893e3fc06ef695d20b35ac436 237 Hamap MF_01220_B Uridylate kinase [pyrH]. 3 236 44.12 T 09-03-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 NA29_RS13240 d119b39893e3fc06ef695d20b35ac436 237 Gene3D G3DSA:3.40.1160.10 3 236 1.4E-86 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase NA29_RS13240 d119b39893e3fc06ef695d20b35ac436 237 PIRSF PIRSF005650 1 237 3.7E-92 T 09-03-2017 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 NA29_RS13240 d119b39893e3fc06ef695d20b35ac436 237 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 5 236 1.6E-100 T 09-03-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 NA29_RS13240 d119b39893e3fc06ef695d20b35ac436 237 SUPERFAMILY SSF53633 4 236 2.23E-73 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase NA29_RS20280 ea869b86ef467588276ef6acfae5a671 236 SUPERFAMILY SSF52540 11 205 1.28E-21 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20280 ea869b86ef467588276ef6acfae5a671 236 Pfam PF00308 Bacterial dnaA protein 16 71 4.2E-6 T 09-03-2017 IPR013317 Chromosomal replication initiator protein DnaA NA29_RS20280 ea869b86ef467588276ef6acfae5a671 236 Pfam PF00308 Bacterial dnaA protein 96 207 1.5E-5 T 09-03-2017 IPR013317 Chromosomal replication initiator protein DnaA NA29_RS20280 ea869b86ef467588276ef6acfae5a671 236 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 46 66 9.4E-5 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like NA29_RS20280 ea869b86ef467588276ef6acfae5a671 236 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 124 151 9.4E-5 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like NA29_RS20280 ea869b86ef467588276ef6acfae5a671 236 Gene3D G3DSA:1.10.8.60 160 224 6.1E-27 T 09-03-2017 NA29_RS20280 ea869b86ef467588276ef6acfae5a671 236 Gene3D G3DSA:3.40.50.300 2 155 1.7E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20280 ea869b86ef467588276ef6acfae5a671 236 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 4 225 3.6E-70 T 09-03-2017 IPR017788 DnaA regulatory inactivator Hda GO:0032297 NA29_RS10995 5f468f8f03db96275abad397012543fa 409 Gene3D G3DSA:3.40.50.1820 12 404 2.7E-130 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS10995 5f468f8f03db96275abad397012543fa 409 Pfam PF06441 Epoxide hydrolase N terminus 17 122 1.7E-34 T 09-03-2017 IPR010497 Epoxide hydrolase, N-terminal KEGG: 00980+3.3.2.9|Reactome: R-HSA-211945 NA29_RS10995 5f468f8f03db96275abad397012543fa 409 PIRSF PIRSF001112 8 405 4.0E-128 T 09-03-2017 IPR016292 Epoxide hydrolase GO:0033961 KEGG: 00980+3.3.2.9|Reactome: R-HSA-211945 NA29_RS10995 5f468f8f03db96275abad397012543fa 409 PRINTS PR00412 Epoxide hydrolase signature 188 201 1.5E-12 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS10995 5f468f8f03db96275abad397012543fa 409 PRINTS PR00412 Epoxide hydrolase signature 376 398 1.5E-12 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS10995 5f468f8f03db96275abad397012543fa 409 PRINTS PR00412 Epoxide hydrolase signature 142 157 1.5E-12 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS10995 5f468f8f03db96275abad397012543fa 409 PRINTS PR00412 Epoxide hydrolase signature 113 131 1.5E-12 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS10995 5f468f8f03db96275abad397012543fa 409 SUPERFAMILY SSF53474 12 400 1.5E-95 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS21505 e0f3b5be3b75bb8a6614c8455b37df63 921 SUPERFAMILY SSF52540 143 348 2.77E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS21505 e0f3b5be3b75bb8a6614c8455b37df63 921 Gene3D G3DSA:3.40.50.300 142 338 1.4E-14 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03495 485118da335b81b83908c606568f39ed 261 Pfam PF12833 Helix-turn-helix domain 181 256 1.2E-19 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS03495 485118da335b81b83908c606568f39ed 261 SMART SM00342 174 256 1.7E-23 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS03495 485118da335b81b83908c606568f39ed 261 Gene3D G3DSA:2.60.120.10 34 80 1.0E-6 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS03495 485118da335b81b83908c606568f39ed 261 SUPERFAMILY SSF46689 211 257 4.93E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS03495 485118da335b81b83908c606568f39ed 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 7.5E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS03495 485118da335b81b83908c606568f39ed 261 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 7.5E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS03495 485118da335b81b83908c606568f39ed 261 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 252 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS03495 485118da335b81b83908c606568f39ed 261 Gene3D G3DSA:1.10.10.60 153 211 6.5E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS03495 485118da335b81b83908c606568f39ed 261 Gene3D G3DSA:1.10.10.60 212 255 2.6E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS03495 485118da335b81b83908c606568f39ed 261 SUPERFAMILY SSF51182 33 207 8.72E-13 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS04100 0c2d1e789abbe94f179ebda9e9d3534c 269 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 115 132 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 NA29_RS04100 0c2d1e789abbe94f179ebda9e9d3534c 269 SUPERFAMILY SSF51430 3 259 1.96E-79 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain NA29_RS04100 0c2d1e789abbe94f179ebda9e9d3534c 269 Gene3D G3DSA:3.20.20.100 3 259 5.4E-88 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain NA29_RS04100 0c2d1e789abbe94f179ebda9e9d3534c 269 PIRSF PIRSF000097 1 267 5.5E-69 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NA29_RS04100 0c2d1e789abbe94f179ebda9e9d3534c 269 PRINTS PR00069 Aldo-keto reductase signature 82 100 4.5E-43 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NA29_RS04100 0c2d1e789abbe94f179ebda9e9d3534c 269 PRINTS PR00069 Aldo-keto reductase signature 26 50 4.5E-43 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NA29_RS04100 0c2d1e789abbe94f179ebda9e9d3534c 269 PRINTS PR00069 Aldo-keto reductase signature 187 211 4.5E-43 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NA29_RS04100 0c2d1e789abbe94f179ebda9e9d3534c 269 PRINTS PR00069 Aldo-keto reductase signature 150 179 4.5E-43 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NA29_RS04100 0c2d1e789abbe94f179ebda9e9d3534c 269 PRINTS PR00069 Aldo-keto reductase signature 115 132 4.5E-43 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NA29_RS04100 0c2d1e789abbe94f179ebda9e9d3534c 269 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 30 47 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 NA29_RS04100 0c2d1e789abbe94f179ebda9e9d3534c 269 Pfam PF00248 Aldo/keto reductase family 9 251 5.3E-47 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain NA29_RS20745 88f098b6483ae9a8c7f9fb636f294d9f 424 Pfam PF13378 Enolase C-terminal domain-like 174 387 7.7E-48 T 09-03-2017 IPR029065 Enolase C-terminal domain-like NA29_RS20745 88f098b6483ae9a8c7f9fb636f294d9f 424 Gene3D G3DSA:3.20.20.120 119 380 4.9E-85 T 09-03-2017 IPR029065 Enolase C-terminal domain-like NA29_RS20745 88f098b6483ae9a8c7f9fb636f294d9f 424 SMART SM00922 171 265 1.3E-20 T 09-03-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal NA29_RS20745 88f098b6483ae9a8c7f9fb636f294d9f 424 SUPERFAMILY SSF51604 135 396 6.68E-69 T 09-03-2017 IPR029065 Enolase C-terminal domain-like NA29_RS20745 88f098b6483ae9a8c7f9fb636f294d9f 424 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 33 135 1.7E-4 T 09-03-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain NA29_RS20745 88f098b6483ae9a8c7f9fb636f294d9f 424 Gene3D G3DSA:3.30.390.10 1 118 6.6E-15 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS20745 88f098b6483ae9a8c7f9fb636f294d9f 424 SUPERFAMILY SSF54826 2 135 6.72E-24 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS16490 573351175faa10c3cd7445e7f99d4e21 530 SUPERFAMILY SSF142984 350 430 2.35E-19 T 09-03-2017 NA29_RS16490 573351175faa10c3cd7445e7f99d4e21 530 SMART SM00928 435 480 1.5E-20 T 09-03-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16490 573351175faa10c3cd7445e7f99d4e21 530 SUPERFAMILY SSF140490 432 519 4.05E-30 T 09-03-2017 NA29_RS16490 573351175faa10c3cd7445e7f99d4e21 530 SUPERFAMILY SSF142019 106 346 3.66E-86 T 09-03-2017 NA29_RS16490 573351175faa10c3cd7445e7f99d4e21 530 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 437 519 6.6E-32 T 09-03-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16490 573351175faa10c3cd7445e7f99d4e21 530 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 154 325 3.8E-46 T 09-03-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16490 573351175faa10c3cd7445e7f99d4e21 530 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 448 459 - T 09-03-2017 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS14110 b4085ce9f08005ceaf399c799030ecc0 228 Gene3D G3DSA:1.10.10.10 12 73 2.9E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14110 b4085ce9f08005ceaf399c799030ecc0 228 Pfam PF07729 FCD domain 82 210 1.6E-19 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS14110 b4085ce9f08005ceaf399c799030ecc0 228 SMART SM00895 82 211 3.1E-16 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS14110 b4085ce9f08005ceaf399c799030ecc0 228 SUPERFAMILY SSF46785 8 97 3.77E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14110 b4085ce9f08005ceaf399c799030ecc0 228 SMART SM00345 14 72 1.1E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS14110 b4085ce9f08005ceaf399c799030ecc0 228 SUPERFAMILY SSF48008 78 210 1.07E-23 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS14110 b4085ce9f08005ceaf399c799030ecc0 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 1.8E-14 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS14110 b4085ce9f08005ceaf399c799030ecc0 228 Gene3D G3DSA:1.20.120.530 76 210 8.0E-23 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 SMART SM00874 408 476 3.7E-28 T 09-03-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 SUPERFAMILY SSF54991 704 811 2.22E-18 T 09-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 Gene3D G3DSA:3.30.70.380 710 811 6.6E-20 T 09-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 SUPERFAMILY SSF46955 409 480 1.92E-18 T 09-03-2017 IPR009061 Putative DNA-binding domain NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 SUPERFAMILY SSF50249 37 195 6.28E-47 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 SUPERFAMILY SSF55681 472 696 1.54E-47 T 09-03-2017 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 SMART SM00873 219 392 1.9E-81 T 09-03-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 806 43.55 T 09-03-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 Gene3D G3DSA:2.40.50.140 42 160 1.4E-43 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 Gene3D G3DSA:3.30.56.20 407 480 1.2E-24 T 09-03-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 Gene3D G3DSA:3.50.40.10 205 397 2.2E-77 T 09-03-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 Gene3D G3DSA:3.30.56.10 161 190 1.6E-23 T 09-03-2017 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 Gene3D G3DSA:3.30.56.10 1 38 1.6E-23 T 09-03-2017 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 Pfam PF03483 B3/4 domain 219 392 1.0E-63 T 09-03-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 Pfam PF03484 tRNA synthetase B5 domain 411 476 1.2E-18 T 09-03-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 Pfam PF01588 Putative tRNA binding domain 45 151 1.2E-23 T 09-03-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 Pfam PF03147 Ferredoxin-fold anticodon binding domain 708 811 5.4E-21 T 09-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 SMART SM00896 708 811 8.3E-31 T 09-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 811 7.2E-226 T 09-03-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 SUPERFAMILY SSF56037 204 398 8.89E-69 T 09-03-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 NA29_RS09370 04f5cd885bef2825eddebf7995a399f8 812 Gene3D G3DSA:3.30.930.10 497 697 3.3E-60 T 09-03-2017 NA29_RS05365 31679a9ba6272c9aefe7ec04cc4f83de 496 Pfam PF00512 His Kinase A (phospho-acceptor) domain 274 341 4.8E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS05365 31679a9ba6272c9aefe7ec04cc4f83de 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 473 4.1E-8 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS05365 31679a9ba6272c9aefe7ec04cc4f83de 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 495 4.1E-8 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS05365 31679a9ba6272c9aefe7ec04cc4f83de 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 438 4.1E-8 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS05365 31679a9ba6272c9aefe7ec04cc4f83de 496 Gene3D G3DSA:1.10.287.130 267 337 4.2E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS05365 31679a9ba6272c9aefe7ec04cc4f83de 496 Pfam PF00672 HAMP domain 184 260 5.0E-7 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS05365 31679a9ba6272c9aefe7ec04cc4f83de 496 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 390 495 8.2E-17 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS05365 31679a9ba6272c9aefe7ec04cc4f83de 496 Gene3D G3DSA:3.30.565.10 348 495 1.5E-37 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS05365 31679a9ba6272c9aefe7ec04cc4f83de 496 SUPERFAMILY SSF47384 257 341 8.24E-17 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS05365 31679a9ba6272c9aefe7ec04cc4f83de 496 SUPERFAMILY SSF55874 331 495 1.31E-38 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS05365 31679a9ba6272c9aefe7ec04cc4f83de 496 SMART SM00388 273 341 4.6E-17 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS05365 31679a9ba6272c9aefe7ec04cc4f83de 496 SMART SM00387 387 496 1.1E-25 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS18785 607a1e3fc967f0422f5bb323a8cfec8b 459 Gene3D G3DSA:1.20.1250.20 261 432 2.8E-27 T 09-03-2017 NA29_RS18785 607a1e3fc967f0422f5bb323a8cfec8b 459 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS18785 607a1e3fc967f0422f5bb323a8cfec8b 459 SUPERFAMILY SSF103473 8 434 1.96E-80 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS18785 607a1e3fc967f0422f5bb323a8cfec8b 459 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS18785 607a1e3fc967f0422f5bb323a8cfec8b 459 Gene3D G3DSA:1.20.1250.20 21 203 1.3E-38 T 09-03-2017 NA29_RS18785 607a1e3fc967f0422f5bb323a8cfec8b 459 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 9 407 1.5E-128 T 09-03-2017 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0005215|GO:0006810|GO:0016021 NA29_RS18785 607a1e3fc967f0422f5bb323a8cfec8b 459 Pfam PF07690 Major Facilitator Superfamily 30 296 6.1E-34 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS04790 6191c4be39f007d5da23e6bfb8e36ec3 88 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 6 84 2.2E-30 T 09-03-2017 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 NA29_RS04790 6191c4be39f007d5da23e6bfb8e36ec3 88 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.5E-23 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NA29_RS04790 6191c4be39f007d5da23e6bfb8e36ec3 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 6.3E-23 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NA29_RS04790 6191c4be39f007d5da23e6bfb8e36ec3 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 6.3E-23 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NA29_RS04790 6191c4be39f007d5da23e6bfb8e36ec3 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 6.3E-23 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NA29_RS04790 6191c4be39f007d5da23e6bfb8e36ec3 88 PIRSF PIRSF004669 1 88 1.9E-24 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NA29_RS17280 3a94c3490b20be905b8c1cfbe5addf0d 265 Pfam PF00005 ABC transporter 25 164 2.3E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS17280 3a94c3490b20be905b8c1cfbe5addf0d 265 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS17280 3a94c3490b20be905b8c1cfbe5addf0d 265 Gene3D G3DSA:3.40.50.300 4 220 1.5E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17280 3a94c3490b20be905b8c1cfbe5addf0d 265 SMART SM00382 34 215 7.8E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS17280 3a94c3490b20be905b8c1cfbe5addf0d 265 SUPERFAMILY SSF52540 5 222 6.73E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01615 ea399fae68987afc9b0926801a0cffdd 508 Pfam PF00672 HAMP domain 184 244 2.8E-7 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS01615 ea399fae68987afc9b0926801a0cffdd 508 Gene3D G3DSA:1.10.287.130 246 312 1.1E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS01615 ea399fae68987afc9b0926801a0cffdd 508 SUPERFAMILY SSF55874 428 504 3.49E-31 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS01615 ea399fae68987afc9b0926801a0cffdd 508 SUPERFAMILY SSF55874 306 397 3.49E-31 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS01615 ea399fae68987afc9b0926801a0cffdd 508 SUPERFAMILY SSF47384 234 316 2.16E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS01615 ea399fae68987afc9b0926801a0cffdd 508 SMART SM00388 251 316 3.9E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS01615 ea399fae68987afc9b0926801a0cffdd 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 457 8.5E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS01615 ea399fae68987afc9b0926801a0cffdd 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 503 8.5E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS01615 ea399fae68987afc9b0926801a0cffdd 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 443 8.5E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS01615 ea399fae68987afc9b0926801a0cffdd 508 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 484 8.5E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS01615 ea399fae68987afc9b0926801a0cffdd 508 Gene3D G3DSA:3.30.565.10 322 505 2.6E-32 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS01615 ea399fae68987afc9b0926801a0cffdd 508 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 366 504 6.5E-16 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS01615 ea399fae68987afc9b0926801a0cffdd 508 Pfam PF08521 Two-component sensor kinase N-terminal 18 174 1.2E-39 T 09-03-2017 IPR013727 Two-component sensor kinase, N-terminal NA29_RS01615 ea399fae68987afc9b0926801a0cffdd 508 SMART SM00387 362 506 4.9E-26 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS01615 ea399fae68987afc9b0926801a0cffdd 508 Pfam PF00512 His Kinase A (phospho-acceptor) domain 251 315 1.1E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS13925 09567ba14af25061c02bff05d79f317b 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS13925 09567ba14af25061c02bff05d79f317b 253 SUPERFAMILY SSF51735 5 252 1.26E-79 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13925 09567ba14af25061c02bff05d79f317b 253 Gene3D G3DSA:3.40.50.720 1 251 4.1E-84 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13925 09567ba14af25061c02bff05d79f317b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.8E-11 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13925 09567ba14af25061c02bff05d79f317b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.8E-11 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13925 09567ba14af25061c02bff05d79f317b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.8E-11 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13925 09567ba14af25061c02bff05d79f317b 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 189 0.0038 T 09-03-2017 NA29_RS13925 09567ba14af25061c02bff05d79f317b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.1E-42 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13925 09567ba14af25061c02bff05d79f317b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 3.1E-42 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13925 09567ba14af25061c02bff05d79f317b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.1E-42 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13925 09567ba14af25061c02bff05d79f317b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.1E-42 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13925 09567ba14af25061c02bff05d79f317b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.1E-42 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13925 09567ba14af25061c02bff05d79f317b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.1E-42 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13925 09567ba14af25061c02bff05d79f317b 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 249 1.2E-64 T 09-03-2017 NA29_RS19835 7dab9137667ad2e4b66d8019ec6310a0 165 Pfam PF00583 Acetyltransferase (GNAT) family 75 141 7.2E-11 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS19835 7dab9137667ad2e4b66d8019ec6310a0 165 Gene3D G3DSA:3.40.630.30 27 149 4.7E-28 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS19835 7dab9137667ad2e4b66d8019ec6310a0 165 SUPERFAMILY SSF55729 34 154 4.96E-18 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS18690 7c72f5d29d815afa88f869830499cedf 369 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 49 62 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NA29_RS18690 7c72f5d29d815afa88f869830499cedf 369 SUPERFAMILY SSF46689 302 353 6.09E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS18690 7c72f5d29d815afa88f869830499cedf 369 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 334 354 1.9E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS18690 7c72f5d29d815afa88f869830499cedf 369 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 317 334 1.9E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS18690 7c72f5d29d815afa88f869830499cedf 369 Gene3D G3DSA:3.40.50.300 23 198 3.5E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18690 7c72f5d29d815afa88f869830499cedf 369 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 112 127 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NA29_RS18690 7c72f5d29d815afa88f869830499cedf 369 SUPERFAMILY SSF52540 26 267 1.03E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18690 7c72f5d29d815afa88f869830499cedf 369 Pfam PF00158 Sigma-54 interaction domain 26 189 1.4E-60 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NA29_RS18690 7c72f5d29d815afa88f869830499cedf 369 Gene3D G3DSA:1.10.10.60 315 350 1.2E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS18690 7c72f5d29d815afa88f869830499cedf 369 SMART SM00382 45 189 3.4E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS18690 7c72f5d29d815afa88f869830499cedf 369 Pfam PF02954 Bacterial regulatory protein, Fis family 315 351 1.0E-10 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS18690 7c72f5d29d815afa88f869830499cedf 369 Gene3D G3DSA:1.10.8.60 213 275 1.6E-12 T 09-03-2017 NA29_RS13970 cf888a17688af078ef58c6bded48c65e 327 Pfam PF07238 PilZ domain 197 317 3.4E-6 T 09-03-2017 IPR009875 PilZ domain GO:0035438 NA29_RS13970 cf888a17688af078ef58c6bded48c65e 327 Pfam PF12945 Flagellar protein YcgR 105 188 5.4E-11 T 09-03-2017 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal NA29_RS13970 cf888a17688af078ef58c6bded48c65e 327 SUPERFAMILY SSF141371 234 310 8.83E-5 T 09-03-2017 NA29_RS13970 cf888a17688af078ef58c6bded48c65e 327 Gene3D G3DSA:2.40.10.220 233 317 1.3E-4 T 09-03-2017 NA29_RS13970 cf888a17688af078ef58c6bded48c65e 327 SUPERFAMILY SSF141371 99 198 6.28E-11 T 09-03-2017 NA29_RS11020 a8d85194e2b7886f8ffaf61fa925d5ad 198 Gene3D G3DSA:1.10.3210.10 6 189 1.7E-35 T 09-03-2017 IPR006674 HD domain NA29_RS11020 a8d85194e2b7886f8ffaf61fa925d5ad 198 SUPERFAMILY SSF109604 4 184 1.53E-36 T 09-03-2017 NA29_RS11020 a8d85194e2b7886f8ffaf61fa925d5ad 198 Pfam PF13023 HD domain 17 167 2.6E-48 T 09-03-2017 IPR006674 HD domain NA29_RS11520 b242dcc1f42ee5d261965f05bd817488 388 SMART SM01119 266 374 3.8E-44 T 09-03-2017 IPR026956 D-serine dehydratase-like domain NA29_RS11520 b242dcc1f42ee5d261965f05bd817488 388 Gene3D G3DSA:3.20.20.10 30 249 5.3E-27 T 09-03-2017 IPR029066 PLP-binding barrel NA29_RS11520 b242dcc1f42ee5d261965f05bd817488 388 Pfam PF01168 Alanine racemase, N-terminal domain 25 251 3.7E-37 T 09-03-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS11520 b242dcc1f42ee5d261965f05bd817488 388 SUPERFAMILY SSF51419 25 260 2.88E-41 T 09-03-2017 IPR029066 PLP-binding barrel NA29_RS11520 b242dcc1f42ee5d261965f05bd817488 388 Pfam PF14031 Putative serine dehydratase domain 266 372 4.8E-20 T 09-03-2017 IPR026956 D-serine dehydratase-like domain NA29_RS15815 f4047ee33d1677f0dd26c29c3a5b27a1 419 PIRSF PIRSF000018 2 418 6.8E-162 T 09-03-2017 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 NA29_RS15815 f4047ee33d1677f0dd26c29c3a5b27a1 419 Gene3D G3DSA:1.10.760.10 306 411 1.1E-24 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS15815 f4047ee33d1677f0dd26c29c3a5b27a1 419 SUPERFAMILY SSF46626 306 409 6.3E-23 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS15815 f4047ee33d1677f0dd26c29c3a5b27a1 419 Gene3D G3DSA:1.10.760.10 167 278 5.8E-12 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS15815 f4047ee33d1677f0dd26c29c3a5b27a1 419 Gene3D G3DSA:1.10.760.10 19 121 2.2E-17 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS15815 f4047ee33d1677f0dd26c29c3a5b27a1 419 SUPERFAMILY SSF46626 12 145 6.69E-23 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS15815 f4047ee33d1677f0dd26c29c3a5b27a1 419 Pfam PF00034 Cytochrome c 170 279 1.1E-5 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS15815 f4047ee33d1677f0dd26c29c3a5b27a1 419 Pfam PF00034 Cytochrome c 24 121 2.2E-4 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS15815 f4047ee33d1677f0dd26c29c3a5b27a1 419 Pfam PF00034 Cytochrome c 306 391 2.5E-9 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS15815 f4047ee33d1677f0dd26c29c3a5b27a1 419 SUPERFAMILY SSF46626 167 278 3.61E-19 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS15815 f4047ee33d1677f0dd26c29c3a5b27a1 419 PRINTS PR00605 Class IC cytochrome C signature 366 388 9.1E-7 T 09-03-2017 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 NA29_RS15815 f4047ee33d1677f0dd26c29c3a5b27a1 419 PRINTS PR00605 Class IC cytochrome C signature 313 324 9.1E-7 T 09-03-2017 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 NA29_RS02995 50e23d92467b7b82a75c30a6a2960889 326 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 309 2.3E-75 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS02995 50e23d92467b7b82a75c30a6a2960889 326 Gene3D G3DSA:3.40.50.1100 76 320 2.7E-72 T 09-03-2017 NA29_RS02995 50e23d92467b7b82a75c30a6a2960889 326 SUPERFAMILY SSF53686 9 317 6.29E-98 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS08620 b0e4830dfe3be271d5f27dc269b0e11d 88 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 81 4.8E-20 T 09-03-2017 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system NA29_RS21355 a2174475b8d7119e8fb688acb3de842c 118 SMART SM00418 10 84 1.8E-12 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS21355 a2174475b8d7119e8fb688acb3de842c 118 Gene3D G3DSA:1.10.10.10 4 106 2.2E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21355 a2174475b8d7119e8fb688acb3de842c 118 SUPERFAMILY SSF46785 5 103 4.96E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21355 a2174475b8d7119e8fb688acb3de842c 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 2.0E-6 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS21355 a2174475b8d7119e8fb688acb3de842c 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 2.0E-6 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS21355 a2174475b8d7119e8fb688acb3de842c 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 2.0E-6 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS21355 a2174475b8d7119e8fb688acb3de842c 118 Pfam PF12840 Helix-turn-helix domain 11 68 4.4E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17595 56868688af3e7e5f0b2c5992c3977619 218 Gene3D G3DSA:3.30.1330.60 97 209 9.0E-40 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS17595 56868688af3e7e5f0b2c5992c3977619 218 SUPERFAMILY SSF103088 96 209 5.23E-38 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS17595 56868688af3e7e5f0b2c5992c3977619 218 Pfam PF13441 YMGG-like Gly-zipper 29 71 1.7E-8 T 09-03-2017 IPR027367 YMGG-like Gly-zipper NA29_RS17595 56868688af3e7e5f0b2c5992c3977619 218 Pfam PF00691 OmpA family 108 203 1.3E-20 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS17595 56868688af3e7e5f0b2c5992c3977619 218 ProSitePatterns PS01068 OmpA-like domain. 141 185 - T 09-03-2017 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 NA29_RS17595 56868688af3e7e5f0b2c5992c3977619 218 PRINTS PR01021 OMPA domain signature 139 154 1.6E-11 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NA29_RS17595 56868688af3e7e5f0b2c5992c3977619 218 PRINTS PR01021 OMPA domain signature 154 170 1.6E-11 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NA29_RS17595 56868688af3e7e5f0b2c5992c3977619 218 PRINTS PR01021 OMPA domain signature 109 131 1.6E-11 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NA29_RS08160 f5022f023c6b3b934116a0a4cb0312e8 296 Gene3D G3DSA:3.20.20.60 8 290 2.9E-98 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS08160 f5022f023c6b3b934116a0a4cb0312e8 296 Pfam PF13714 Phosphoenolpyruvate phosphomutase 12 256 2.8E-50 T 09-03-2017 NA29_RS08160 f5022f023c6b3b934116a0a4cb0312e8 296 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 6 294 50.328 T 09-03-2017 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 NA29_RS08160 f5022f023c6b3b934116a0a4cb0312e8 296 ProSitePatterns PS00161 Isocitrate lyase signature. 123 128 - T 09-03-2017 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 NA29_RS08160 f5022f023c6b3b934116a0a4cb0312e8 296 SUPERFAMILY SSF51621 5 292 2.96E-99 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS08160 f5022f023c6b3b934116a0a4cb0312e8 296 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 9 293 2.6E-132 T 09-03-2017 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 Gene3D G3DSA:1.10.3850.10 811 1024 1.1E-54 T 09-03-2017 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 Gene3D G3DSA:1.10.3850.10 279 498 2.7E-58 T 09-03-2017 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 Gene3D G3DSA:3.30.2090.10 181 274 5.5E-18 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 Gene3D G3DSA:3.30.70.1430 566 667 3.6E-23 T 09-03-2017 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 Gene3D G3DSA:3.30.70.1430 38 138 1.0E-29 T 09-03-2017 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 SUPERFAMILY SSF82866 802 1026 4.58E-45 T 09-03-2017 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 SUPERFAMILY SSF82714 719 805 5.36E-22 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 Gene3D G3DSA:3.30.2090.10 719 804 5.9E-25 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 5.9E-103 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 5.9E-103 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 5.9E-103 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 5.9E-103 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 5.9E-103 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 5.9E-103 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 5.9E-103 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 5.9E-103 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 5.9E-103 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 SUPERFAMILY SSF82866 295 497 7.85E-50 T 09-03-2017 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 SUPERFAMILY SSF82693 564 667 4.13E-22 T 09-03-2017 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 Pfam PF00873 AcrB/AcrD/AcrF family 1 1022 0.0 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 SUPERFAMILY SSF82714 182 270 1.7E-16 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 SUPERFAMILY SSF82693 38 129 1.8E-23 T 09-03-2017 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 SUPERFAMILY SSF82693 273 328 7.32E-23 T 09-03-2017 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 SUPERFAMILY SSF82693 135 181 7.32E-23 T 09-03-2017 NA29_RS19275 d33f29b53dd45b7be0e95e28e36239f0 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1038 0.0 T 09-03-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 NA29_RS22795 539e15892888f4a65211e413aa0f2fc6 428 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 423 29.34 T 09-03-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 NA29_RS22795 539e15892888f4a65211e413aa0f2fc6 428 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 325 421 5.1E-27 T 09-03-2017 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 NA29_RS22795 539e15892888f4a65211e413aa0f2fc6 428 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 104 127 - T 09-03-2017 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 NA29_RS22795 539e15892888f4a65211e413aa0f2fc6 428 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 177 310 1.5E-44 T 09-03-2017 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase NA29_RS22795 539e15892888f4a65211e413aa0f2fc6 428 SUPERFAMILY SSF69742 1 163 8.5E-46 T 09-03-2017 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 NA29_RS22795 539e15892888f4a65211e413aa0f2fc6 428 SUPERFAMILY SSF69075 322 422 2.88E-28 T 09-03-2017 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 NA29_RS22795 539e15892888f4a65211e413aa0f2fc6 428 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 161 2.5E-46 T 09-03-2017 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 NA29_RS22795 539e15892888f4a65211e413aa0f2fc6 428 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 420 7.6E-126 T 09-03-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 NA29_RS22795 539e15892888f4a65211e413aa0f2fc6 428 PIRSF PIRSF000445 1 428 2.7E-149 T 09-03-2017 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 NA29_RS22795 539e15892888f4a65211e413aa0f2fc6 428 SUPERFAMILY SSF51735 168 317 1.48E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22795 539e15892888f4a65211e413aa0f2fc6 428 Gene3D G3DSA:3.40.50.720 168 315 6.1E-35 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS02685 27f326aac510b2f77537722808c3cc9f 315 SMART SM01400 6 123 6.3E-78 T 09-03-2017 NA29_RS02685 27f326aac510b2f77537722808c3cc9f 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 09-03-2017 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 NA29_RS02685 27f326aac510b2f77537722808c3cc9f 315 Gene3D G3DSA:3.40.50.2020 3 161 2.1E-76 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS02685 27f326aac510b2f77537722808c3cc9f 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 313 9.2E-124 T 09-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 NA29_RS02685 27f326aac510b2f77537722808c3cc9f 315 SUPERFAMILY SSF53271 71 303 5.11E-65 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS02685 27f326aac510b2f77537722808c3cc9f 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 205 313 1.0E-27 T 09-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 NA29_RS02685 27f326aac510b2f77537722808c3cc9f 315 Gene3D G3DSA:3.40.50.2020 162 283 8.6E-56 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS02685 27f326aac510b2f77537722808c3cc9f 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 123 1.0E-48 T 09-03-2017 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 NA29_RS02685 27f326aac510b2f77537722808c3cc9f 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 6 314 48.701 T 09-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 NA29_RS05575 e6c5a44b799e868282ab3b5b7c81ec9c 354 SUPERFAMILY SSF51569 3 329 1.76E-103 T 09-03-2017 NA29_RS05575 e6c5a44b799e868282ab3b5b7c81ec9c 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 NA29_RS05575 e6c5a44b799e868282ab3b5b7c81ec9c 354 Gene3D G3DSA:3.20.20.70 1 335 4.2E-108 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS05575 e6c5a44b799e868282ab3b5b7c81ec9c 354 PIRSF PIRSF001359 1 329 1.5E-82 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 NA29_RS05575 e6c5a44b799e868282ab3b5b7c81ec9c 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 1.9E-179 T 09-03-2017 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 NA29_RS05575 e6c5a44b799e868282ab3b5b7c81ec9c 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 NA29_RS05575 e6c5a44b799e868282ab3b5b7c81ec9c 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 328 1.0E-92 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 NA29_RS05575 e6c5a44b799e868282ab3b5b7c81ec9c 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 4.0E-98 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 NA29_RS05260 2493a5d0d03179587afa4d151cc6f664 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.8E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS05260 2493a5d0d03179587afa4d151cc6f664 326 SUPERFAMILY SSF46785 1 85 1.58E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05260 2493a5d0d03179587afa4d151cc6f664 326 Gene3D G3DSA:3.40.190.10 176 262 7.8E-18 T 09-03-2017 NA29_RS05260 2493a5d0d03179587afa4d151cc6f664 326 Gene3D G3DSA:3.40.190.10 92 175 8.0E-12 T 09-03-2017 NA29_RS05260 2493a5d0d03179587afa4d151cc6f664 326 Pfam PF03466 LysR substrate binding domain 87 291 1.6E-30 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS05260 2493a5d0d03179587afa4d151cc6f664 326 SUPERFAMILY SSF53850 89 296 5.28E-30 T 09-03-2017 NA29_RS05260 2493a5d0d03179587afa4d151cc6f664 326 Gene3D G3DSA:1.10.10.10 1 86 2.4E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05260 2493a5d0d03179587afa4d151cc6f664 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS05260 2493a5d0d03179587afa4d151cc6f664 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS05260 2493a5d0d03179587afa4d151cc6f664 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS12485 c0533d5d6749aa1c427feaff260dd012 78 Pfam PF06150 ChaB 9 76 3.4E-27 T 09-03-2017 IPR009317 ChaB NA29_RS12485 c0533d5d6749aa1c427feaff260dd012 78 SUPERFAMILY SSF140376 2 70 1.31E-27 T 09-03-2017 NA29_RS10290 3f378915914f81fb816df7e37141d935 271 SUPERFAMILY SSF52540 1 269 4.59E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10290 3f378915914f81fb816df7e37141d935 271 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 4.1E-28 T 09-03-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain NA29_RS10290 3f378915914f81fb816df7e37141d935 271 PIRSF PIRSF003092 1 271 1.9E-89 T 09-03-2017 IPR025501 ATP binding protein MinD NA29_RS10290 3f378915914f81fb816df7e37141d935 271 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 269 4.1E-105 T 09-03-2017 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 NA29_RS10290 3f378915914f81fb816df7e37141d935 271 Gene3D G3DSA:3.40.50.300 1 246 8.4E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13830 f4b14346b805ca7058c1371a76a61037 316 Hamap MF_00492 Transaldolase [tal]. 1 316 48.224 T 09-03-2017 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 NA29_RS13830 f4b14346b805ca7058c1371a76a61037 316 TIGRFAM TIGR00874 talAB: transaldolase 2 313 1.3E-133 T 09-03-2017 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 NA29_RS13830 f4b14346b805ca7058c1371a76a61037 316 Pfam PF00923 Transaldolase 13 311 1.4E-93 T 09-03-2017 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 NA29_RS13830 f4b14346b805ca7058c1371a76a61037 316 ProSitePatterns PS00958 Transaldolase active site. 122 139 - T 09-03-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 NA29_RS13830 f4b14346b805ca7058c1371a76a61037 316 SUPERFAMILY SSF51569 1 314 6.38E-107 T 09-03-2017 NA29_RS13830 f4b14346b805ca7058c1371a76a61037 316 Gene3D G3DSA:3.20.20.70 1 314 4.7E-119 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS13830 f4b14346b805ca7058c1371a76a61037 316 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 09-03-2017 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 NA29_RS04335 e681ac27380858f1db09f95ddeb3f37c 275 Gene3D G3DSA:3.30.1130.10 138 274 3.5E-49 T 09-03-2017 NA29_RS04335 e681ac27380858f1db09f95ddeb3f37c 275 TIGRFAM TIGR03138 QueF: queuine synthase 4 275 1.5E-115 T 09-03-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 NA29_RS04335 e681ac27380858f1db09f95ddeb3f37c 275 Gene3D G3DSA:3.30.1130.10 15 130 2.2E-38 T 09-03-2017 NA29_RS04335 e681ac27380858f1db09f95ddeb3f37c 275 PIRSF PIRSF004750 1 275 1.2E-115 T 09-03-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 NA29_RS04335 e681ac27380858f1db09f95ddeb3f37c 275 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 15 124 5.0E-43 T 09-03-2017 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 NA29_RS04335 e681ac27380858f1db09f95ddeb3f37c 275 Pfam PF14489 QueF-like protein 188 261 8.7E-25 T 09-03-2017 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 NA29_RS04335 e681ac27380858f1db09f95ddeb3f37c 275 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 275 144.371 T 09-03-2017 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 NA29_RS04335 e681ac27380858f1db09f95ddeb3f37c 275 SUPERFAMILY SSF55620 166 261 4.97E-10 T 09-03-2017 NA29_RS22590 c784bcd881ca0f0abf7300f3a4625b0a 431 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 11 429 1.7E-214 T 09-03-2017 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 NA29_RS22590 c784bcd881ca0f0abf7300f3a4625b0a 431 PIRSF PIRSF006444 1 431 4.9E-206 T 09-03-2017 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 NA29_RS22590 c784bcd881ca0f0abf7300f3a4625b0a 431 SUPERFAMILY SSF56801 22 379 4.32E-63 T 09-03-2017 NA29_RS22590 c784bcd881ca0f0abf7300f3a4625b0a 431 Gene3D G3DSA:3.40.50.980 91 245 8.6E-14 T 09-03-2017 NA29_RS22590 c784bcd881ca0f0abf7300f3a4625b0a 431 Pfam PF14535 AMP-binding enzyme C-terminal domain 335 429 1.3E-24 T 09-03-2017 IPR028154 AMP-dependent ligase, C-terminal NA29_RS22590 c784bcd881ca0f0abf7300f3a4625b0a 431 Gene3D G3DSA:3.30.300.30 325 430 1.5E-34 T 09-03-2017 NA29_RS22590 c784bcd881ca0f0abf7300f3a4625b0a 431 Pfam PF00501 AMP-binding enzyme 93 289 1.9E-17 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS15745 1afe14e9688f6e8c20195a5aaac05988 311 Pfam PF10728 Domain of unknown function (DUF2520) 147 275 1.4E-29 T 09-03-2017 IPR018931 Domain of unknown function DUF2520 NA29_RS15745 1afe14e9688f6e8c20195a5aaac05988 311 Gene3D G3DSA:3.40.50.720 12 176 4.3E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS15745 1afe14e9688f6e8c20195a5aaac05988 311 SUPERFAMILY SSF51735 14 176 2.58E-29 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS15745 1afe14e9688f6e8c20195a5aaac05988 311 Pfam PF10727 Rossmann-like domain 6 123 6.2E-18 T 09-03-2017 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain NA29_RS15745 1afe14e9688f6e8c20195a5aaac05988 311 Gene3D G3DSA:1.10.1040.20 179 280 3.8E-25 T 09-03-2017 IPR018931 Domain of unknown function DUF2520 NA29_RS15745 1afe14e9688f6e8c20195a5aaac05988 311 SUPERFAMILY SSF48179 180 283 1.56E-20 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS20665 87878987ba7d56cbe24f696f5b82a156 330 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 199 322 1.0E-39 T 09-03-2017 IPR019257 Histidine-specific methyltransferase, SAM-dependent NA29_RS20665 87878987ba7d56cbe24f696f5b82a156 330 PIRSF PIRSF018005 1 327 4.9E-106 T 09-03-2017 IPR017804 Methyltransferase EgtD-like NA29_RS20665 87878987ba7d56cbe24f696f5b82a156 330 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 23 323 1.1E-111 T 09-03-2017 IPR017804 Methyltransferase EgtD-like NA29_RS20665 87878987ba7d56cbe24f696f5b82a156 330 SUPERFAMILY SSF53335 42 232 1.79E-7 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS20665 87878987ba7d56cbe24f696f5b82a156 330 SUPERFAMILY SSF53335 289 320 1.79E-7 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS14410 088c52c6434e2ec277ad4f6fd958e713 426 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 18 414 28.466 T 09-03-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 NA29_RS14410 088c52c6434e2ec277ad4f6fd958e713 426 Pfam PF04551 GcpE protein 31 410 5.9E-114 T 09-03-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 NA29_RS14410 088c52c6434e2ec277ad4f6fd958e713 426 PIRSF PIRSF004640 11 420 3.9E-131 T 09-03-2017 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 NA29_RS14410 088c52c6434e2ec277ad4f6fd958e713 426 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 16 409 4.4E-119 T 09-03-2017 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 TIGRFAM TIGR02063 RNase_R: ribonuclease R 9 584 6.6E-205 T 09-03-2017 IPR011805 Ribonuclease R GO:0003723|GO:0004518 NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 SUPERFAMILY SSF50249 527 582 1.83E-140 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 SUPERFAMILY SSF50249 176 491 1.83E-140 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 SUPERFAMILY SSF50249 616 658 1.83E-140 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 Pfam PF00575 S1 RNA binding domain 657 738 3.3E-12 T 09-03-2017 IPR003029 S1 domain GO:0003676 NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 Pfam PF08206 Ribonuclease B OB domain 76 133 3.2E-21 T 09-03-2017 IPR013223 Ribonuclease B, N-terminal OB domain NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 SMART SM00316 658 741 3.5E-13 T 09-03-2017 IPR022967 RNA-binding domain, S1 NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 SMART SM00316 69 131 22.0 T 09-03-2017 IPR022967 RNA-binding domain, S1 NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 SMART SM00955 249 581 1.1E-181 T 09-03-2017 NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 SMART SM00357 75 134 1.3E-10 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 Gene3D G3DSA:2.40.50.140 660 744 2.1E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 SUPERFAMILY SSF50249 56 136 1.95E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 Pfam PF00773 RNB domain 249 580 6.8E-104 T 09-03-2017 NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 ProSitePatterns PS01175 Ribonuclease II family signature. 548 572 - T 09-03-2017 IPR022966 Ribonuclease II/R, conserved site NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 65 741 3.0E-210 T 09-03-2017 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 SUPERFAMILY SSF50249 660 740 2.42E-21 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS13850 f1818aad6a2025621c8811e65ded9a3b 835 Hamap MF_01895 Ribonuclease R [rnr]. 27 741 56.829 T 09-03-2017 IPR011805 Ribonuclease R GO:0003723|GO:0004518 NA29_RS14790 aef5b189b4669457d4b634cf2d7e8fe3 266 Gene3D G3DSA:3.30.70.580 1 104 8.7E-35 T 09-03-2017 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS14790 aef5b189b4669457d4b634cf2d7e8fe3 266 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.62 T 09-03-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS14790 aef5b189b4669457d4b634cf2d7e8fe3 266 SUPERFAMILY SSF55120 1 252 1.58E-88 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS14790 aef5b189b4669457d4b634cf2d7e8fe3 266 PIRSF PIRSF001430 1 256 5.1E-77 T 09-03-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS14790 aef5b189b4669457d4b634cf2d7e8fe3 266 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 8.7E-62 T 09-03-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS14790 aef5b189b4669457d4b634cf2d7e8fe3 266 Gene3D G3DSA:3.30.70.660 106 241 6.3E-48 T 09-03-2017 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS14790 aef5b189b4669457d4b634cf2d7e8fe3 266 Pfam PF01416 tRNA pseudouridine synthase 8 102 2.8E-9 T 09-03-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS14790 aef5b189b4669457d4b634cf2d7e8fe3 266 Pfam PF01416 tRNA pseudouridine synthase 142 244 7.6E-30 T 09-03-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS17795 c549b1a026c7ac342adb025146968516 459 Gene3D G3DSA:3.40.50.720 1 210 1.5E-78 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17795 c549b1a026c7ac342adb025146968516 459 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 184 3.3E-68 T 09-03-2017 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 NA29_RS17795 c549b1a026c7ac342adb025146968516 459 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 432 1.4E-135 T 09-03-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 NA29_RS17795 c549b1a026c7ac342adb025146968516 459 PIRSF PIRSF500134 1 453 8.3E-190 T 09-03-2017 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346 NA29_RS17795 c549b1a026c7ac342adb025146968516 459 SUPERFAMILY SSF48179 208 302 2.04E-34 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS17795 c549b1a026c7ac342adb025146968516 459 SMART SM00984 324 436 6.7E-46 T 09-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 NA29_RS17795 c549b1a026c7ac342adb025146968516 459 Gene3D G3DSA:1.20.5.100 211 238 1.0E-17 T 09-03-2017 NA29_RS17795 c549b1a026c7ac342adb025146968516 459 SUPERFAMILY SSF52413 309 446 6.8E-39 T 09-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 NA29_RS17795 c549b1a026c7ac342adb025146968516 459 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 208 300 6.1E-39 T 09-03-2017 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 NA29_RS17795 c549b1a026c7ac342adb025146968516 459 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 435 9.5E-29 T 09-03-2017 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 NA29_RS17795 c549b1a026c7ac342adb025146968516 459 PIRSF PIRSF000124 1 451 8.1E-154 T 09-03-2017 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 NA29_RS17795 c549b1a026c7ac342adb025146968516 459 Gene3D G3DSA:3.40.50.720 239 453 4.4E-77 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17795 c549b1a026c7ac342adb025146968516 459 SUPERFAMILY SSF51735 1 198 1.53E-56 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10565 c15eb13d95e90c237a31e94ee67a7867 168 SUPERFAMILY SSF46785 2 62 5.62E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10565 c15eb13d95e90c237a31e94ee67a7867 168 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 8.4E-22 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS10565 c15eb13d95e90c237a31e94ee67a7867 168 SUPERFAMILY SSF54909 63 152 4.02E-21 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS10565 c15eb13d95e90c237a31e94ee67a7867 168 SMART SM00344 3 112 1.3E-37 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NA29_RS10565 c15eb13d95e90c237a31e94ee67a7867 168 Gene3D G3DSA:3.30.70.920 55 152 5.2E-30 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS10565 c15eb13d95e90c237a31e94ee67a7867 168 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 2.8E-12 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS10565 c15eb13d95e90c237a31e94ee67a7867 168 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 2.8E-12 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS10565 c15eb13d95e90c237a31e94ee67a7867 168 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 2.8E-12 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS10565 c15eb13d95e90c237a31e94ee67a7867 168 Pfam PF13404 AsnC-type helix-turn-helix domain 3 43 1.0E-16 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS10565 c15eb13d95e90c237a31e94ee67a7867 168 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 09-03-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NA29_RS10565 c15eb13d95e90c237a31e94ee67a7867 168 Gene3D G3DSA:1.10.10.10 1 54 4.3E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10400 da9642bd50c973cb242c6cbf0b017bbb 1343 SUPERFAMILY SSF55326 644 841 7.06E-68 T 09-03-2017 NA29_RS10400 da9642bd50c973cb242c6cbf0b017bbb 1343 Gene3D G3DSA:3.30.1330.10 670 835 2.3E-15 T 09-03-2017 IPR016188 PurM-like, N-terminal domain NA29_RS10400 da9642bd50c973cb242c6cbf0b017bbb 1343 Gene3D G3DSA:3.30.1330.10 220 444 9.3E-39 T 09-03-2017 IPR016188 PurM-like, N-terminal domain NA29_RS10400 da9642bd50c973cb242c6cbf0b017bbb 1343 SUPERFAMILY SSF109736 164 229 1.44E-22 T 09-03-2017 NA29_RS10400 da9642bd50c973cb242c6cbf0b017bbb 1343 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1092 1342 2.6E-97 T 09-03-2017 NA29_RS10400 da9642bd50c973cb242c6cbf0b017bbb 1343 SUPERFAMILY SSF56042 455 680 9.27E-50 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain NA29_RS10400 da9642bd50c973cb242c6cbf0b017bbb 1343 Pfam PF02769 AIR synthase related protein, C-terminal domain 865 1010 4.1E-13 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain NA29_RS10400 da9642bd50c973cb242c6cbf0b017bbb 1343 Pfam PF02769 AIR synthase related protein, C-terminal domain 455 612 9.3E-25 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain NA29_RS10400 da9642bd50c973cb242c6cbf0b017bbb 1343 SUPERFAMILY SSF56042 853 1085 2.54E-49 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain NA29_RS10400 da9642bd50c973cb242c6cbf0b017bbb 1343 SUPERFAMILY SSF55326 230 450 4.88E-57 T 09-03-2017 NA29_RS10400 da9642bd50c973cb242c6cbf0b017bbb 1343 SMART SM01211 1092 1342 2.0E-136 T 09-03-2017 NA29_RS10400 da9642bd50c973cb242c6cbf0b017bbb 1343 SUPERFAMILY SSF82697 4 160 1.41E-40 T 09-03-2017 NA29_RS10400 da9642bd50c973cb242c6cbf0b017bbb 1343 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 4 1343 20.909 T 09-03-2017 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 NA29_RS10400 da9642bd50c973cb242c6cbf0b017bbb 1343 SUPERFAMILY SSF52317 1089 1342 3.71E-87 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS10400 da9642bd50c973cb242c6cbf0b017bbb 1343 Gene3D G3DSA:3.40.50.880 1093 1318 3.9E-9 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS10400 da9642bd50c973cb242c6cbf0b017bbb 1343 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 7 1342 0.0 T 09-03-2017 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 NA29_RS14000 a231cb0bbfcb72254cd61c040ffe78f8 155 Gene3D G3DSA:3.40.250.10 22 153 1.7E-36 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS14000 a231cb0bbfcb72254cd61c040ffe78f8 155 SUPERFAMILY SSF52821 18 152 2.36E-17 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS14000 a231cb0bbfcb72254cd61c040ffe78f8 155 SMART SM00450 27 138 0.0098 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS14000 a231cb0bbfcb72254cd61c040ffe78f8 155 Pfam PF00581 Rhodanese-like domain 27 130 3.1E-5 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS04850 b89d385cd2cae75f4af03050d924ff94 376 Gene3D G3DSA:3.20.20.105 1 369 1.5E-165 T 09-03-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 NA29_RS04850 b89d385cd2cae75f4af03050d924ff94 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 367 4.6E-91 T 09-03-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 NA29_RS04850 b89d385cd2cae75f4af03050d924ff94 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 4 369 6.2E-165 T 09-03-2017 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 NA29_RS04850 b89d385cd2cae75f4af03050d924ff94 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 4 369 8.7E-157 T 09-03-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 NA29_RS04850 b89d385cd2cae75f4af03050d924ff94 376 SUPERFAMILY SSF51713 1 368 7.72E-156 T 09-03-2017 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 NA29_RS04850 b89d385cd2cae75f4af03050d924ff94 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 2 365 56.278 T 09-03-2017 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 NA29_RS01575 de5c6f2ba08ed3e8cd77d7b3e7fcb933 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 99 109 3.1E-8 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS01575 de5c6f2ba08ed3e8cd77d7b3e7fcb933 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 193 205 3.1E-8 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS01575 de5c6f2ba08ed3e8cd77d7b3e7fcb933 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 160 171 3.1E-8 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS01575 de5c6f2ba08ed3e8cd77d7b3e7fcb933 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 329 346 3.1E-8 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS01575 de5c6f2ba08ed3e8cd77d7b3e7fcb933 384 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 55 66 3.1E-8 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS01575 de5c6f2ba08ed3e8cd77d7b3e7fcb933 384 Gene3D G3DSA:2.40.160.10 25 384 2.0E-98 T 09-03-2017 IPR023614 Porin domain NA29_RS01575 de5c6f2ba08ed3e8cd77d7b3e7fcb933 384 Pfam PF13609 Gram-negative porin 14 351 5.5E-48 T 09-03-2017 NA29_RS01575 de5c6f2ba08ed3e8cd77d7b3e7fcb933 384 PRINTS PR00184 Neisseria sp. porin signature 326 350 4.3E-10 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS01575 de5c6f2ba08ed3e8cd77d7b3e7fcb933 384 PRINTS PR00184 Neisseria sp. porin signature 194 211 4.3E-10 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS01575 de5c6f2ba08ed3e8cd77d7b3e7fcb933 384 PRINTS PR00184 Neisseria sp. porin signature 159 176 4.3E-10 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS01575 de5c6f2ba08ed3e8cd77d7b3e7fcb933 384 PRINTS PR00184 Neisseria sp. porin signature 57 82 4.3E-10 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS01575 de5c6f2ba08ed3e8cd77d7b3e7fcb933 384 SUPERFAMILY SSF56935 25 384 4.07E-85 T 09-03-2017 NA29_RS14140 a21a7892bc0de6538ac21c4a3c502ce5 300 SUPERFAMILY SSF51735 1 277 1.44E-62 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS14140 a21a7892bc0de6538ac21c4a3c502ce5 300 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS14140 a21a7892bc0de6538ac21c4a3c502ce5 300 Pfam PF00106 short chain dehydrogenase 7 199 2.3E-48 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS14140 a21a7892bc0de6538ac21c4a3c502ce5 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.2E-10 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS14140 a21a7892bc0de6538ac21c4a3c502ce5 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.2E-10 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS14140 a21a7892bc0de6538ac21c4a3c502ce5 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.2E-10 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS14140 a21a7892bc0de6538ac21c4a3c502ce5 300 Gene3D G3DSA:3.40.50.720 6 243 7.4E-62 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS14140 a21a7892bc0de6538ac21c4a3c502ce5 300 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 0.0015 T 09-03-2017 NA29_RS14140 a21a7892bc0de6538ac21c4a3c502ce5 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.8E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS14140 a21a7892bc0de6538ac21c4a3c502ce5 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.8E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS14140 a21a7892bc0de6538ac21c4a3c502ce5 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 6.8E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS14140 a21a7892bc0de6538ac21c4a3c502ce5 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.8E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS14140 a21a7892bc0de6538ac21c4a3c502ce5 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.8E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS05765 bb89ae060f085695b64d6c8ede29125c 316 Pfam PF03301 Tryptophan 2,3-dioxygenase 49 316 3.0E-67 T 09-03-2017 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 NA29_RS05765 bb89ae060f085695b64d6c8ede29125c 316 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 53 316 41.323 T 09-03-2017 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 NA29_RS05765 bb89ae060f085695b64d6c8ede29125c 316 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 53 315 3.2E-133 T 09-03-2017 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11 NA29_RS05765 bb89ae060f085695b64d6c8ede29125c 316 SUPERFAMILY SSF140959 59 316 6.93E-103 T 09-03-2017 NA29_RS17925 512b7e61436dc36f9fffc37888af45bb 622 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 612 6.3E-253 T 09-03-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS17925 512b7e61436dc36f9fffc37888af45bb 622 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 612 44.967 T 09-03-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS17925 512b7e61436dc36f9fffc37888af45bb 622 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS17925 512b7e61436dc36f9fffc37888af45bb 622 Pfam PF00920 Dehydratase family 34 609 1.9E-217 T 09-03-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS17925 512b7e61436dc36f9fffc37888af45bb 622 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 511 522 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS17925 512b7e61436dc36f9fffc37888af45bb 622 SUPERFAMILY SSF52016 423 614 1.18E-61 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS17925 512b7e61436dc36f9fffc37888af45bb 622 SUPERFAMILY SSF143975 3 422 1.83E-131 T 09-03-2017 NA29_RS03900 ef2a727668f03e5375fdeb997c9fd23c 129 SUPERFAMILY SSF54427 7 125 1.17E-31 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS03900 ef2a727668f03e5375fdeb997c9fd23c 129 Pfam PF12680 SnoaL-like domain 14 116 4.3E-26 T 09-03-2017 IPR009959 Polyketide cyclase SnoaL-like domain NA29_RS03900 ef2a727668f03e5375fdeb997c9fd23c 129 Gene3D G3DSA:3.10.450.50 7 117 6.1E-27 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS07185 94e401a9d75d9f85e4f04da0076c47cc 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 3.5E-43 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07185 94e401a9d75d9f85e4f04da0076c47cc 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 3.5E-43 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07185 94e401a9d75d9f85e4f04da0076c47cc 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 3.5E-43 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07185 94e401a9d75d9f85e4f04da0076c47cc 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 233 253 3.5E-43 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07185 94e401a9d75d9f85e4f04da0076c47cc 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 3.5E-43 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07185 94e401a9d75d9f85e4f04da0076c47cc 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 3.5E-43 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07185 94e401a9d75d9f85e4f04da0076c47cc 273 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 27 268 6.1E-62 T 09-03-2017 NA29_RS07185 94e401a9d75d9f85e4f04da0076c47cc 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 2.1E-12 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07185 94e401a9d75d9f85e4f04da0076c47cc 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 2.1E-12 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07185 94e401a9d75d9f85e4f04da0076c47cc 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 2.1E-12 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07185 94e401a9d75d9f85e4f04da0076c47cc 273 SUPERFAMILY SSF51735 16 272 8.34E-81 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS07185 94e401a9d75d9f85e4f04da0076c47cc 273 PIRSF PIRSF000126 1 259 2.6E-50 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS07185 94e401a9d75d9f85e4f04da0076c47cc 273 Gene3D G3DSA:3.40.50.720 15 270 4.1E-85 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS07185 94e401a9d75d9f85e4f04da0076c47cc 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 155 183 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS17965 96f1875f0fcddcc71ef22afdd2afa20b 126 Gene3D G3DSA:3.40.50.1400 4 120 1.3E-35 T 09-03-2017 NA29_RS17965 96f1875f0fcddcc71ef22afdd2afa20b 126 Pfam PF01903 CbiX 12 116 1.2E-26 T 09-03-2017 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 NA29_RS17965 96f1875f0fcddcc71ef22afdd2afa20b 126 SUPERFAMILY SSF53800 4 119 1.01E-32 T 09-03-2017 NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 418 438 3.1E-8 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 401 418 3.1E-8 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 Gene3D G3DSA:1.10.8.60 319 379 8.0E-20 T 09-03-2017 NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 Gene3D G3DSA:3.40.50.2300 3 128 2.2E-31 T 09-03-2017 NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 Pfam PF02954 Bacterial regulatory protein, Fis family 395 435 1.8E-10 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 Pfam PF00158 Sigma-54 interaction domain 146 312 2.7E-67 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 SUPERFAMILY SSF46689 359 437 3.94E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 SUPERFAMILY SSF52172 3 190 3.84E-39 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 Gene3D G3DSA:1.10.10.60 384 437 5.3E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 SUPERFAMILY SSF52540 146 375 5.73E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 SMART SM00382 166 309 4.5E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 Gene3D G3DSA:3.40.50.300 144 318 8.2E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 SMART SM00448 5 116 2.8E-24 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NA29_RS02345 1aaf76645adff75c9bbe19ab6022fc43 449 Pfam PF00072 Response regulator receiver domain 7 115 3.5E-24 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS06685 b387894ffa5721dcf48a548d8f5bdc47 400 Gene3D G3DSA:3.40.50.80 260 394 1.7E-28 T 09-03-2017 NA29_RS06685 b387894ffa5721dcf48a548d8f5bdc47 400 PRINTS PR00410 Phenol hydroxylase reductase family signature 267 286 2.1E-5 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS06685 b387894ffa5721dcf48a548d8f5bdc47 400 PRINTS PR00410 Phenol hydroxylase reductase family signature 359 367 2.1E-5 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS06685 b387894ffa5721dcf48a548d8f5bdc47 400 PRINTS PR00410 Phenol hydroxylase reductase family signature 182 194 2.1E-5 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS06685 b387894ffa5721dcf48a548d8f5bdc47 400 Gene3D G3DSA:1.10.490.10 3 141 1.1E-50 T 09-03-2017 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 NA29_RS06685 b387894ffa5721dcf48a548d8f5bdc47 400 Gene3D G3DSA:2.40.30.10 152 258 6.0E-30 T 09-03-2017 NA29_RS06685 b387894ffa5721dcf48a548d8f5bdc47 400 Pfam PF00042 Globin 10 102 1.9E-10 T 09-03-2017 IPR000971 Globin GO:0019825|GO:0020037 NA29_RS06685 b387894ffa5721dcf48a548d8f5bdc47 400 Pfam PF00970 Oxidoreductase FAD-binding domain 155 256 2.9E-6 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 NA29_RS06685 b387894ffa5721dcf48a548d8f5bdc47 400 SUPERFAMILY SSF46458 2 140 3.49E-40 T 09-03-2017 IPR009050 Globin-like NA29_RS06685 b387894ffa5721dcf48a548d8f5bdc47 400 SUPERFAMILY SSF52343 258 393 9.43E-31 T 09-03-2017 NA29_RS06685 b387894ffa5721dcf48a548d8f5bdc47 400 Pfam PF00175 Oxidoreductase NAD-binding domain 268 371 6.4E-10 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NA29_RS06685 b387894ffa5721dcf48a548d8f5bdc47 400 SUPERFAMILY SSF63380 152 258 2.04E-24 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS02635 5827a3de1f5d4644641adc598d77bda0 472 Gene3D G3DSA:3.30.830.10 39 258 4.5E-56 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 NA29_RS02635 5827a3de1f5d4644641adc598d77bda0 472 SUPERFAMILY SSF63411 262 451 4.94E-38 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NA29_RS02635 5827a3de1f5d4644641adc598d77bda0 472 Gene3D G3DSA:3.30.830.10 260 447 1.5E-29 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 NA29_RS02635 5827a3de1f5d4644641adc598d77bda0 472 Pfam PF00675 Insulinase (Peptidase family M16) 49 193 2.0E-25 T 09-03-2017 IPR011765 Peptidase M16, N-terminal NA29_RS02635 5827a3de1f5d4644641adc598d77bda0 472 SUPERFAMILY SSF63411 38 247 8.03E-61 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NA29_RS02635 5827a3de1f5d4644641adc598d77bda0 472 Pfam PF05193 Peptidase M16 inactive domain 202 383 5.6E-31 T 09-03-2017 IPR007863 Peptidase M16, C-terminal NA29_RS06640 ae1b1048544280f9d3db0706009cee98 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 285 296 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS06640 ae1b1048544280f9d3db0706009cee98 490 SUPERFAMILY SSF53720 7 489 8.9E-162 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS06640 ae1b1048544280f9d3db0706009cee98 490 Gene3D G3DSA:3.40.309.10 272 461 3.6E-69 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS06640 ae1b1048544280f9d3db0706009cee98 490 TIGRFAM TIGR03216 OH_muco_semi_DH: 2-hydroxymuconic semialdehyde dehydrogenase 9 490 1.0E-267 T 09-03-2017 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase GO:0016620|GO:0055114 NA29_RS06640 ae1b1048544280f9d3db0706009cee98 490 Gene3D G3DSA:3.40.605.10 10 271 4.0E-90 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS06640 ae1b1048544280f9d3db0706009cee98 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 257 264 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS06640 ae1b1048544280f9d3db0706009cee98 490 Pfam PF00171 Aldehyde dehydrogenase family 21 485 1.3E-164 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS20145 8ad1ab11a42a0faa4936c93b9c6c80b2 107 SUPERFAMILY SSF51182 15 106 1.75E-35 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS20145 8ad1ab11a42a0faa4936c93b9c6c80b2 107 Gene3D G3DSA:2.60.120.10 14 106 5.7E-39 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS20145 8ad1ab11a42a0faa4936c93b9c6c80b2 107 Pfam PF06865 Protein of unknown function (DUF1255) 15 106 5.5E-38 T 09-03-2017 IPR009664 Protein of unknown function DUF1255 NA29_RS20145 8ad1ab11a42a0faa4936c93b9c6c80b2 107 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 14 107 28.742 T 09-03-2017 IPR009664 Protein of unknown function DUF1255 NA29_RS23895 cdc739917d7a5c8c2cc2b4ea686b46e5 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.546 T 09-03-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23895 cdc739917d7a5c8c2cc2b4ea686b46e5 124 SUPERFAMILY SSF50249 2 123 6.51E-52 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS23895 cdc739917d7a5c8c2cc2b4ea686b46e5 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.1E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23895 cdc739917d7a5c8c2cc2b4ea686b46e5 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.1E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23895 cdc739917d7a5c8c2cc2b4ea686b46e5 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.1E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23895 cdc739917d7a5c8c2cc2b4ea686b46e5 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.1E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23895 cdc739917d7a5c8c2cc2b4ea686b46e5 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.1E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23895 cdc739917d7a5c8c2cc2b4ea686b46e5 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.1E-60 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23895 cdc739917d7a5c8c2cc2b4ea686b46e5 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.4E-70 T 09-03-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23895 cdc739917d7a5c8c2cc2b4ea686b46e5 124 PIRSF PIRSF002133 1 124 9.0E-55 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23895 cdc739917d7a5c8c2cc2b4ea686b46e5 124 Gene3D G3DSA:2.40.50.140 1 123 3.9E-66 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS23895 cdc739917d7a5c8c2cc2b4ea686b46e5 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23895 cdc739917d7a5c8c2cc2b4ea686b46e5 124 Pfam PF00164 Ribosomal protein S12/S23 4 123 1.6E-43 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS06140 9e3f87c5dc154e2e7d614b41de46c511 422 Gene3D G3DSA:3.40.50.2300 164 310 1.2E-5 T 09-03-2017 NA29_RS06140 9e3f87c5dc154e2e7d614b41de46c511 422 SUPERFAMILY SSF53822 27 404 2.65E-53 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS06140 9e3f87c5dc154e2e7d614b41de46c511 422 Gene3D G3DSA:3.40.50.2300 23 160 5.4E-32 T 09-03-2017 NA29_RS06140 9e3f87c5dc154e2e7d614b41de46c511 422 Gene3D G3DSA:3.40.50.2300 311 367 5.4E-32 T 09-03-2017 NA29_RS06140 9e3f87c5dc154e2e7d614b41de46c511 422 Pfam PF13458 Periplasmic binding protein 27 385 2.1E-38 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS05960 3cec290af55a484488b724aa1ba2f7bd 437 ProSitePatterns PS00217 Sugar transport proteins signature 2. 128 153 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS05960 3cec290af55a484488b724aa1ba2f7bd 437 Pfam PF07690 Major Facilitator Superfamily 25 376 2.4E-26 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS05960 3cec290af55a484488b724aa1ba2f7bd 437 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS05960 3cec290af55a484488b724aa1ba2f7bd 437 Gene3D G3DSA:1.20.1250.20 244 421 1.4E-21 T 09-03-2017 NA29_RS05960 3cec290af55a484488b724aa1ba2f7bd 437 Gene3D G3DSA:1.20.1250.20 19 224 2.1E-25 T 09-03-2017 NA29_RS05960 3cec290af55a484488b724aa1ba2f7bd 437 ProSitePatterns PS00216 Sugar transport proteins signature 1. 296 313 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS05960 3cec290af55a484488b724aa1ba2f7bd 437 SUPERFAMILY SSF103473 18 426 2.35E-65 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS01455 7e8bcb0cad715dfad9cabff25376a9ca 328 SMART SM00342 236 319 3.8E-23 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS01455 7e8bcb0cad715dfad9cabff25376a9ca 328 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 273 315 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS01455 7e8bcb0cad715dfad9cabff25376a9ca 328 Gene3D G3DSA:3.40.50.880 6 201 2.7E-51 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS01455 7e8bcb0cad715dfad9cabff25376a9ca 328 SUPERFAMILY SSF52317 5 200 3.97E-43 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS01455 7e8bcb0cad715dfad9cabff25376a9ca 328 Pfam PF12833 Helix-turn-helix domain 242 321 1.5E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS01455 7e8bcb0cad715dfad9cabff25376a9ca 328 Pfam PF01965 DJ-1/PfpI family 7 180 1.1E-18 T 09-03-2017 IPR002818 DJ-1/PfpI NA29_RS01455 7e8bcb0cad715dfad9cabff25376a9ca 328 SUPERFAMILY SSF46689 225 266 7.79E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS01455 7e8bcb0cad715dfad9cabff25376a9ca 328 Gene3D G3DSA:1.10.10.60 226 273 9.6E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS01455 7e8bcb0cad715dfad9cabff25376a9ca 328 SUPERFAMILY SSF46689 272 322 4.93E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS01455 7e8bcb0cad715dfad9cabff25376a9ca 328 Gene3D G3DSA:1.10.10.60 274 321 1.5E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS01300 a651cc3a7c9c5c1fd8427786781a8835 314 SUPERFAMILY SSF46785 1 107 1.51E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01300 a651cc3a7c9c5c1fd8427786781a8835 314 SUPERFAMILY SSF53850 94 296 1.18E-39 T 09-03-2017 NA29_RS01300 a651cc3a7c9c5c1fd8427786781a8835 314 Gene3D G3DSA:3.40.190.10 94 178 4.3E-14 T 09-03-2017 NA29_RS01300 a651cc3a7c9c5c1fd8427786781a8835 314 Gene3D G3DSA:1.10.10.10 1 90 2.4E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01300 a651cc3a7c9c5c1fd8427786781a8835 314 Pfam PF03466 LysR substrate binding domain 93 293 3.1E-47 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS01300 a651cc3a7c9c5c1fd8427786781a8835 314 Gene3D G3DSA:3.40.190.10 179 267 4.7E-26 T 09-03-2017 NA29_RS01300 a651cc3a7c9c5c1fd8427786781a8835 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.6E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01300 a651cc3a7c9c5c1fd8427786781a8835 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.6E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01300 a651cc3a7c9c5c1fd8427786781a8835 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.6E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01300 a651cc3a7c9c5c1fd8427786781a8835 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 66 1.2E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS05070 35cada8611ee2a6043d664a86d451420 477 SUPERFAMILY SSF103473 25 475 1.1E-69 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS05070 35cada8611ee2a6043d664a86d451420 477 Gene3D G3DSA:1.20.1250.20 288 473 8.5E-21 T 09-03-2017 NA29_RS05070 35cada8611ee2a6043d664a86d451420 477 Gene3D G3DSA:1.20.1250.20 43 238 5.5E-21 T 09-03-2017 NA29_RS05070 35cada8611ee2a6043d664a86d451420 477 Pfam PF00083 Sugar (and other) transporter 44 476 3.3E-43 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS05070 35cada8611ee2a6043d664a86d451420 477 ProSitePatterns PS00217 Sugar transport proteins signature 2. 146 171 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS09715 a5b81df3a8dd6360522049860a2c3109 779 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 52 691 4.2E-186 T 09-03-2017 NA29_RS09715 a5b81df3a8dd6360522049860a2c3109 779 Gene3D G3DSA:2.40.50.140 334 403 3.0E-21 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS09715 a5b81df3a8dd6360522049860a2c3109 779 Pfam PF00905 Penicillin binding protein transpeptidase domain 409 654 2.9E-37 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NA29_RS09715 a5b81df3a8dd6360522049860a2c3109 779 SUPERFAMILY SSF56601 404 710 1.77E-116 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS09715 a5b81df3a8dd6360522049860a2c3109 779 SUPERFAMILY SSF56601 198 220 1.77E-116 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS09715 a5b81df3a8dd6360522049860a2c3109 779 SUPERFAMILY SSF56601 249 300 1.77E-116 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS09715 a5b81df3a8dd6360522049860a2c3109 779 Gene3D G3DSA:3.40.710.10 404 711 7.9E-124 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS09715 a5b81df3a8dd6360522049860a2c3109 779 Gene3D G3DSA:3.40.710.10 220 300 7.9E-124 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS09715 a5b81df3a8dd6360522049860a2c3109 779 SUPERFAMILY SSF53955 29 241 4.22E-78 T 09-03-2017 IPR023346 Lysozyme-like domain NA29_RS09715 a5b81df3a8dd6360522049860a2c3109 779 Gene3D G3DSA:1.10.3810.10 43 219 2.8E-75 T 09-03-2017 NA29_RS09715 a5b81df3a8dd6360522049860a2c3109 779 Pfam PF00912 Transglycosylase 43 216 4.2E-64 T 09-03-2017 IPR001264 Glycosyl transferase, family 51 NA29_RS09715 a5b81df3a8dd6360522049860a2c3109 779 Pfam PF17092 Penicillin-binding protein OB-like domain 303 407 3.8E-18 T 09-03-2017 IPR031376 Penicillin-binding protein, OB-like domain NA29_RS17200 30e6f45ede48e39ef52a3143b2edb63f 212 Gene3D G3DSA:3.30.1150.10 135 212 2.7E-11 T 09-03-2017 NA29_RS17200 30e6f45ede48e39ef52a3143b2edb63f 212 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 142 212 2.0E-15 T 09-03-2017 IPR006260 TonB, C-terminal GO:0006810 NA29_RS17200 30e6f45ede48e39ef52a3143b2edb63f 212 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 141 211 7.1E-18 T 09-03-2017 IPR006260 TonB, C-terminal GO:0006810 NA29_RS17200 30e6f45ede48e39ef52a3143b2edb63f 212 PRINTS PR01374 Gram-negative bacterial tonB protein signature 55 65 3.1E-8 T 09-03-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 NA29_RS17200 30e6f45ede48e39ef52a3143b2edb63f 212 PRINTS PR01374 Gram-negative bacterial tonB protein signature 156 174 3.1E-8 T 09-03-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 NA29_RS17200 30e6f45ede48e39ef52a3143b2edb63f 212 PRINTS PR01374 Gram-negative bacterial tonB protein signature 135 156 3.1E-8 T 09-03-2017 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 NA29_RS17200 30e6f45ede48e39ef52a3143b2edb63f 212 SUPERFAMILY SSF74653 137 209 5.1E-15 T 09-03-2017 NA29_RS04180 3d5b12c8d32940c1298c3a5288e80e17 166 SMART SM00903 17 162 1.2E-56 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS04180 3d5b12c8d32940c1298c3a5288e80e17 166 Pfam PF01613 Flavin reductase like domain 18 163 2.0E-37 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS04180 3d5b12c8d32940c1298c3a5288e80e17 166 SUPERFAMILY SSF50475 8 165 2.26E-47 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS04180 3d5b12c8d32940c1298c3a5288e80e17 166 Gene3D G3DSA:2.30.110.10 6 161 9.2E-56 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS00865 88dfec795357e151d6e3135f1a80ff0d 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 199 218 1.3E-27 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NA29_RS00865 88dfec795357e151d6e3135f1a80ff0d 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 1.3E-27 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NA29_RS00865 88dfec795357e151d6e3135f1a80ff0d 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 177 199 1.3E-27 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NA29_RS00865 88dfec795357e151d6e3135f1a80ff0d 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 79 98 1.3E-27 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NA29_RS00865 88dfec795357e151d6e3135f1a80ff0d 258 Pfam PF01311 Bacterial export proteins, family 1 14 234 1.3E-46 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NA29_RS00865 88dfec795357e151d6e3135f1a80ff0d 258 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 10 249 1.1E-73 T 09-03-2017 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 NA29_RS15710 559673540e512b12302a1a2b562b4ae9 129 Pfam PF01245 Ribosomal protein L19 3 117 1.3E-46 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS15710 559673540e512b12302a1a2b562b4ae9 129 PIRSF PIRSF002191 1 129 5.2E-51 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS15710 559673540e512b12302a1a2b562b4ae9 129 PRINTS PR00061 Ribosomal protein L19 signature 8 37 1.0E-34 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS15710 559673540e512b12302a1a2b562b4ae9 129 PRINTS PR00061 Ribosomal protein L19 signature 92 117 1.0E-34 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS15710 559673540e512b12302a1a2b562b4ae9 129 PRINTS PR00061 Ribosomal protein L19 signature 38 67 1.0E-34 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS15710 559673540e512b12302a1a2b562b4ae9 129 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 09-03-2017 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS15710 559673540e512b12302a1a2b562b4ae9 129 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 118 30.153 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS15710 559673540e512b12302a1a2b562b4ae9 129 SUPERFAMILY SSF50104 3 119 3.71E-44 T 09-03-2017 IPR008991 Translation protein SH3-like domain NA29_RS15710 559673540e512b12302a1a2b562b4ae9 129 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 117 5.2E-49 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS22020 5d1f7ae2042fc10c8d0972c9c59dcd4f 77 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 40 57 4.5E-10 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS22020 5d1f7ae2042fc10c8d0972c9c59dcd4f 77 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 57 77 4.5E-10 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS22020 5d1f7ae2042fc10c8d0972c9c59dcd4f 77 Pfam PF02954 Bacterial regulatory protein, Fis family 36 74 5.7E-13 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS22020 5d1f7ae2042fc10c8d0972c9c59dcd4f 77 SUPERFAMILY SSF46689 12 76 8.24E-21 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS22020 5d1f7ae2042fc10c8d0972c9c59dcd4f 77 PIRSF PIRSF002097 1 77 3.2E-31 T 09-03-2017 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 NA29_RS22020 5d1f7ae2042fc10c8d0972c9c59dcd4f 77 Gene3D G3DSA:1.10.10.60 6 76 3.6E-23 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS06770 455301b7ca3cbeb47fa60a07b4d014ba 452 PIRSF PIRSF005353 2 452 4.5E-144 T 09-03-2017 IPR026033 Purine permease PbuG-like NA29_RS06770 455301b7ca3cbeb47fa60a07b4d014ba 452 Pfam PF00860 Permease family 26 412 1.7E-41 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 NA29_RS08380 c487619878ff6853fa1fed59feea125e 155 SUPERFAMILY SSF53955 23 142 2.01E-36 T 09-03-2017 IPR023346 Lysozyme-like domain NA29_RS08380 c487619878ff6853fa1fed59feea125e 155 Gene3D G3DSA:1.10.530.10 25 125 7.1E-19 T 09-03-2017 NA29_RS08380 c487619878ff6853fa1fed59feea125e 155 Pfam PF01464 Transglycosylase SLT domain 28 135 5.5E-17 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 NA29_RS10630 f020bbe665be35d14d1294597860cd51 901 SUPERFAMILY SSF52210 301 454 5.63E-39 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 NA29_RS10630 f020bbe665be35d14d1294597860cd51 901 Gene3D G3DSA:3.40.630.30 732 886 9.0E-25 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS10630 f020bbe665be35d14d1294597860cd51 901 Pfam PF13549 ATP-grasp domain 482 702 8.5E-87 T 09-03-2017 NA29_RS10630 f020bbe665be35d14d1294597860cd51 901 Gene3D G3DSA:3.30.470.20 495 597 1.4E-5 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS10630 f020bbe665be35d14d1294597860cd51 901 Gene3D G3DSA:3.40.50.261 138 292 1.3E-36 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 NA29_RS10630 f020bbe665be35d14d1294597860cd51 901 SMART SM00881 9 104 2.4E-37 T 09-03-2017 IPR003781 CoA-binding GO:0048037 NA29_RS10630 f020bbe665be35d14d1294597860cd51 901 SUPERFAMILY SSF52210 134 297 5.1E-51 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 NA29_RS10630 f020bbe665be35d14d1294597860cd51 901 Gene3D G3DSA:3.40.50.720 1 137 1.8E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10630 f020bbe665be35d14d1294597860cd51 901 SUPERFAMILY SSF55729 732 879 5.15E-24 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS10630 f020bbe665be35d14d1294597860cd51 901 SUPERFAMILY SSF51735 1 144 1.04E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10630 f020bbe665be35d14d1294597860cd51 901 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 156 293 1.3E-62 T 09-03-2017 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain NA29_RS10630 f020bbe665be35d14d1294597860cd51 901 SUPERFAMILY SSF56059 491 704 2.16E-42 T 09-03-2017 NA29_RS10630 f020bbe665be35d14d1294597860cd51 901 Pfam PF13380 CoA binding domain 13 138 7.4E-26 T 09-03-2017 IPR003781 CoA-binding GO:0048037 NA29_RS10630 f020bbe665be35d14d1294597860cd51 901 Gene3D G3DSA:3.40.50.261 301 446 5.3E-22 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 NA29_RS10630 f020bbe665be35d14d1294597860cd51 901 Pfam PF00583 Acetyltransferase (GNAT) family 801 872 2.0E-9 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS13525 8d0fb10ec5874917aa1bb290e17a0014 300 Pfam PF01522 Polysaccharide deacetylase 15 170 1.8E-9 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 NA29_RS13525 8d0fb10ec5874917aa1bb290e17a0014 300 SUPERFAMILY SSF88713 5 47 1.97E-21 T 09-03-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NA29_RS13525 8d0fb10ec5874917aa1bb290e17a0014 300 SUPERFAMILY SSF88713 216 268 1.97E-21 T 09-03-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NA29_RS13525 8d0fb10ec5874917aa1bb290e17a0014 300 SUPERFAMILY SSF88713 92 183 1.97E-21 T 09-03-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NA29_RS13525 8d0fb10ec5874917aa1bb290e17a0014 300 Gene3D G3DSA:3.20.20.370 14 38 1.1E-24 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 NA29_RS13525 8d0fb10ec5874917aa1bb290e17a0014 300 Gene3D G3DSA:3.20.20.370 86 269 1.1E-24 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 NA29_RS13025 a7854e23639a6caa1771f2639df138f9 324 Gene3D G3DSA:1.10.10.10 5 87 1.9E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13025 a7854e23639a6caa1771f2639df138f9 324 SUPERFAMILY SSF46785 5 114 5.86E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13025 a7854e23639a6caa1771f2639df138f9 324 Gene3D G3DSA:3.40.190.10 178 263 2.8E-18 T 09-03-2017 NA29_RS13025 a7854e23639a6caa1771f2639df138f9 324 Pfam PF03466 LysR substrate binding domain 92 297 2.7E-42 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS13025 a7854e23639a6caa1771f2639df138f9 324 Gene3D G3DSA:3.40.190.10 94 177 5.5E-24 T 09-03-2017 NA29_RS13025 a7854e23639a6caa1771f2639df138f9 324 SUPERFAMILY SSF53850 92 301 3.72E-44 T 09-03-2017 NA29_RS13025 a7854e23639a6caa1771f2639df138f9 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.3E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS02815 e577d445124356e64c0bd5abdb1dbdb1 234 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS02815 e577d445124356e64c0bd5abdb1dbdb1 234 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 1 227 7.8E-99 T 09-03-2017 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 NA29_RS02815 e577d445124356e64c0bd5abdb1dbdb1 234 SMART SM00382 33 230 1.5E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS02815 e577d445124356e64c0bd5abdb1dbdb1 234 Gene3D G3DSA:3.40.50.300 1 227 2.3E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02815 e577d445124356e64c0bd5abdb1dbdb1 234 SUPERFAMILY SSF52540 2 227 2.15E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02815 e577d445124356e64c0bd5abdb1dbdb1 234 Pfam PF00005 ABC transporter 24 182 2.4E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS22745 f7d38bbc77bd4441dd1d407a59dc55b4 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS22745 f7d38bbc77bd4441dd1d407a59dc55b4 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS22745 f7d38bbc77bd4441dd1d407a59dc55b4 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS22745 f7d38bbc77bd4441dd1d407a59dc55b4 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS22745 f7d38bbc77bd4441dd1d407a59dc55b4 364 Gene3D G3DSA:1.10.150.300 131 201 9.2E-27 T 09-03-2017 IPR023192 TGS-like domain NA29_RS22745 f7d38bbc77bd4441dd1d407a59dc55b4 364 SUPERFAMILY SSF52540 3 302 3.96E-88 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22745 f7d38bbc77bd4441dd1d407a59dc55b4 364 SUPERFAMILY SSF81271 280 360 2.4E-35 T 09-03-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 NA29_RS22745 f7d38bbc77bd4441dd1d407a59dc55b4 364 Gene3D G3DSA:3.40.50.300 4 130 1.8E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22745 f7d38bbc77bd4441dd1d407a59dc55b4 364 Gene3D G3DSA:3.40.50.300 202 267 1.8E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22745 f7d38bbc77bd4441dd1d407a59dc55b4 364 Gene3D G3DSA:3.10.20.30 268 364 1.3E-48 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS22745 f7d38bbc77bd4441dd1d407a59dc55b4 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 364 44.857 T 09-03-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 NA29_RS22745 f7d38bbc77bd4441dd1d407a59dc55b4 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 5.7E-158 T 09-03-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 NA29_RS22745 f7d38bbc77bd4441dd1d407a59dc55b4 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 6.7E-39 T 09-03-2017 IPR013029 Domain of unknown function DUF933 NA29_RS22745 f7d38bbc77bd4441dd1d407a59dc55b4 364 PIRSF PIRSF006641 1 364 8.0E-155 T 09-03-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 NA29_RS22745 f7d38bbc77bd4441dd1d407a59dc55b4 364 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.8E-22 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS04985 b9289465fd29498c58e9f1b5ecaf4fbd 176 SUPERFAMILY SSF82153 15 176 3.14E-41 T 09-03-2017 IPR000782 FAS1 domain NA29_RS04985 b9289465fd29498c58e9f1b5ecaf4fbd 176 SMART SM00554 66 176 2.2E-23 T 09-03-2017 IPR000782 FAS1 domain NA29_RS04985 b9289465fd29498c58e9f1b5ecaf4fbd 176 Pfam PF02469 Fasciclin domain 42 176 5.3E-32 T 09-03-2017 IPR000782 FAS1 domain NA29_RS04985 b9289465fd29498c58e9f1b5ecaf4fbd 176 Gene3D G3DSA:2.30.180.10 30 176 7.4E-38 T 09-03-2017 IPR000782 FAS1 domain NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 181 1.1E-14 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 625 32.824 T 09-03-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 SMART SM00387 26 183 3.4E-7 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 Gene3D G3DSA:3.30.565.10 4 240 3.9E-81 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 SUPERFAMILY SSF55874 3 215 5.63E-65 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 PRINTS PR00775 90kDa heat shock protein signature 92 109 1.7E-59 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 PRINTS PR00775 90kDa heat shock protein signature 74 91 1.7E-59 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 PRINTS PR00775 90kDa heat shock protein signature 25 47 1.7E-59 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 PRINTS PR00775 90kDa heat shock protein signature 4 24 1.7E-59 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 PRINTS PR00775 90kDa heat shock protein signature 119 141 1.7E-59 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 PRINTS PR00775 90kDa heat shock protein signature 189 207 1.7E-59 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 PRINTS PR00775 90kDa heat shock protein signature 171 188 1.7E-59 T 09-03-2017 IPR020575 Heat shock protein Hsp90, N-terminal NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 SUPERFAMILY SSF54211 233 488 1.29E-98 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 SUPERFAMILY SSF110942 514 625 1.26E-36 T 09-03-2017 NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 24 33 - T 09-03-2017 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 Pfam PF00183 Hsp90 protein 218 624 1.1E-129 T 09-03-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 NA29_RS15460 4804659e7761d20f1f8aa9a57f1cd277 628 PIRSF PIRSF002583 1 628 7.5E-214 T 09-03-2017 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 NA29_RS15390 d32a071a2d1ec483dd3381333ffb2400 300 Pfam PF14697 4Fe-4S dicluster domain 80 134 6.0E-17 T 09-03-2017 NA29_RS15390 d32a071a2d1ec483dd3381333ffb2400 300 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS15390 d32a071a2d1ec483dd3381333ffb2400 300 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 5 154 1.6E-64 T 09-03-2017 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 NA29_RS15390 d32a071a2d1ec483dd3381333ffb2400 300 SUPERFAMILY SSF54862 11 141 1.48E-29 T 09-03-2017 NA29_RS15390 d32a071a2d1ec483dd3381333ffb2400 300 Pfam PF04060 Putative Fe-S cluster 15 47 8.1E-14 T 09-03-2017 IPR007202 4Fe-4S domain GO:0051536 NA29_RS15390 d32a071a2d1ec483dd3381333ffb2400 300 Gene3D G3DSA:3.30.70.20 92 124 1.2E-13 T 09-03-2017 NA29_RS15390 d32a071a2d1ec483dd3381333ffb2400 300 Gene3D G3DSA:3.30.70.20 19 39 6.9E-5 T 09-03-2017 NA29_RS15390 d32a071a2d1ec483dd3381333ffb2400 300 Gene3D G3DSA:3.30.70.20 78 91 6.9E-5 T 09-03-2017 NA29_RS15390 d32a071a2d1ec483dd3381333ffb2400 300 Gene3D G3DSA:1.10.1060.10 125 158 6.2E-4 T 09-03-2017 NA29_RS15390 d32a071a2d1ec483dd3381333ffb2400 300 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 SUPERFAMILY SSF47336 1032 1100 4.45E-17 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 SUPERFAMILY SSF52777 1122 1318 2.0E-37 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Gene3D G3DSA:3.30.300.30 2446 2560 4.6E-38 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Gene3D G3DSA:3.30.300.30 923 1041 1.1E-30 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Pfam PF00501 AMP-binding enzyme 2053 2451 9.7E-97 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Pfam PF00501 AMP-binding enzyme 533 928 2.3E-78 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 SUPERFAMILY SSF52777 238 496 9.78E-53 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Gene3D G3DSA:1.10.1200.10 2561 2625 1.8E-23 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Gene3D G3DSA:1.10.1200.10 1042 1103 3.0E-25 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Pfam PF13745 HxxPF-repeated domain 383 473 1.9E-24 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Pfam PF00668 Condensation domain 55 360 1.4E-56 T 09-03-2017 IPR001242 Condensation domain NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Pfam PF00668 Condensation domain 1587 1879 1.2E-63 T 09-03-2017 IPR001242 Condensation domain NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Pfam PF00668 Condensation domain 1121 1424 8.0E-49 T 09-03-2017 IPR001242 Condensation domain NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2070 2475 1.0E-135 T 09-03-2017 IPR010071 Amino acid adenylation domain NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 552 952 6.8E-115 T 09-03-2017 IPR010071 Amino acid adenylation domain NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1062 1077 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 668 679 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 SUPERFAMILY SSF52777 1304 1555 1.56E-32 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Gene3D G3DSA:3.40.50.980 677 828 1.0E-29 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Gene3D G3DSA:3.40.50.980 2199 2355 6.1E-47 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Gene3D G3DSA:2.30.38.10 838 918 8.7E-24 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Gene3D G3DSA:2.30.38.10 2361 2440 1.4E-21 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 SUPERFAMILY SSF52777 58 231 2.45E-41 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 SUPERFAMILY SSF52777 1769 2009 3.85E-50 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 SUPERFAMILY SSF56801 2041 2570 1.83E-151 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Pfam PF00550 Phosphopantetheine attachment site 1040 1100 1.7E-10 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Pfam PF00550 Phosphopantetheine attachment site 2560 2621 6.0E-11 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 SUPERFAMILY SSF52777 1592 1765 4.22E-41 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 SMART SM00823 Phosphopantetheine attachment site 1038 1106 0.0039 T 09-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 SMART SM00823 Phosphopantetheine attachment site 2557 2626 0.11 T 09-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2189 2200 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Gene3D G3DSA:3.40.50.980 525 676 5.5E-43 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Gene3D G3DSA:3.40.50.980 2043 2198 2.1E-48 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Pfam PF13193 AMP-binding enzyme C-terminal domain 936 1014 4.9E-6 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 Pfam PF13193 AMP-binding enzyme C-terminal domain 2459 2533 4.7E-9 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 SUPERFAMILY SSF56801 509 1050 1.02E-133 T 09-03-2017 NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 SUPERFAMILY SSF47336 2550 2620 2.22E-16 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1432 1578 9.6E-27 T 09-03-2017 IPR010060 Non-ribosomal peptide synthase NA29_RS08580 07d743bbf856ceb887505774c81edeae 2650 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2581 2596 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site NA29_RS13885 865cff05b5820034f8cdd160137bef69 188 Gene3D G3DSA:1.20.1290.10 72 178 2.1E-25 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS13885 865cff05b5820034f8cdd160137bef69 188 Pfam PF02627 Carboxymuconolactone decarboxylase family 52 105 2.7E-8 T 09-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS13885 865cff05b5820034f8cdd160137bef69 188 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 58 99 9.3E-10 T 09-03-2017 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS13885 865cff05b5820034f8cdd160137bef69 188 SUPERFAMILY SSF69118 1 182 8.9E-43 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS13885 865cff05b5820034f8cdd160137bef69 188 Gene3D G3DSA:1.20.1290.10 40 71 1.9E-4 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS13885 865cff05b5820034f8cdd160137bef69 188 Gene3D G3DSA:1.20.5.810 9 39 1.9E-4 T 09-03-2017 NA29_RS11790 7acc53ea8ba2318e0a7b93af6d7bc714 228 Pfam PF00857 Isochorismatase family 15 166 9.0E-28 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS11790 7acc53ea8ba2318e0a7b93af6d7bc714 228 Gene3D G3DSA:3.40.50.850 6 209 1.0E-46 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS11790 7acc53ea8ba2318e0a7b93af6d7bc714 228 SUPERFAMILY SSF52499 4 207 6.93E-48 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS19080 d36e359e870b4f234c815967c980ca63 326 SUPERFAMILY SSF55729 176 308 1.32E-19 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS19080 d36e359e870b4f234c815967c980ca63 326 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 6.6E-7 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS19080 d36e359e870b4f234c815967c980ca63 326 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 6.6E-7 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS19080 d36e359e870b4f234c815967c980ca63 326 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 6.6E-7 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS19080 d36e359e870b4f234c815967c980ca63 326 Pfam PF12802 MarR family 39 97 1.4E-11 T 09-03-2017 NA29_RS19080 d36e359e870b4f234c815967c980ca63 326 SUPERFAMILY SSF46785 30 150 3.63E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19080 d36e359e870b4f234c815967c980ca63 326 SMART SM00347 34 134 8.7E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS19080 d36e359e870b4f234c815967c980ca63 326 Gene3D G3DSA:3.40.630.30 170 308 3.1E-22 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS19080 d36e359e870b4f234c815967c980ca63 326 Pfam PF00583 Acetyltransferase (GNAT) family 223 298 2.6E-9 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS19080 d36e359e870b4f234c815967c980ca63 326 Gene3D G3DSA:1.10.10.10 17 149 6.3E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS23925 a655ca88db45adb27c4fcb407e710e19 102 Pfam PF13663 Domain of unknown function (DUF4148) 1 69 3.1E-15 T 09-03-2017 IPR025421 Protein of unknown function DUF4148 NA29_RS19310 670ce163d846fc158873ceb34f7f4c3c 401 Pfam PF00202 Aminotransferase class-III 12 394 8.2E-109 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS19310 670ce163d846fc158873ceb34f7f4c3c 401 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 8 395 36.793 T 09-03-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 NA29_RS19310 670ce163d846fc158873ceb34f7f4c3c 401 Gene3D G3DSA:3.90.1150.10 5 54 3.2E-38 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS19310 670ce163d846fc158873ceb34f7f4c3c 401 Gene3D G3DSA:3.90.1150.10 304 396 3.2E-38 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS19310 670ce163d846fc158873ceb34f7f4c3c 401 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 219 256 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS19310 670ce163d846fc158873ceb34f7f4c3c 401 SUPERFAMILY SSF53383 12 395 1.51E-119 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS19310 670ce163d846fc158873ceb34f7f4c3c 401 Gene3D G3DSA:3.40.640.10 55 301 7.4E-83 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS19310 670ce163d846fc158873ceb34f7f4c3c 401 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 3 394 8.9E-149 T 09-03-2017 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 NA29_RS01155 4c0a91cf0830bec60525b644d93bc32a 301 SUPERFAMILY SSF53850 92 299 6.11E-34 T 09-03-2017 NA29_RS01155 4c0a91cf0830bec60525b644d93bc32a 301 Gene3D G3DSA:1.10.10.10 3 89 3.5E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01155 4c0a91cf0830bec60525b644d93bc32a 301 SUPERFAMILY SSF46785 2 111 1.32E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01155 4c0a91cf0830bec60525b644d93bc32a 301 Pfam PF03466 LysR substrate binding domain 90 296 6.2E-30 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS01155 4c0a91cf0830bec60525b644d93bc32a 301 Gene3D G3DSA:3.40.190.10 180 265 8.2E-15 T 09-03-2017 NA29_RS01155 4c0a91cf0830bec60525b644d93bc32a 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.9E-22 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01155 4c0a91cf0830bec60525b644d93bc32a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.2E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01155 4c0a91cf0830bec60525b644d93bc32a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.2E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01155 4c0a91cf0830bec60525b644d93bc32a 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.2E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01155 4c0a91cf0830bec60525b644d93bc32a 301 Gene3D G3DSA:3.40.190.10 92 179 4.0E-14 T 09-03-2017 NA29_RS22610 60056003a17694663044a5f547bfc026 226 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 219 8.6E-98 T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NA29_RS22610 60056003a17694663044a5f547bfc026 226 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 135 157 - T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NA29_RS22610 60056003a17694663044a5f547bfc026 226 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NA29_RS22610 60056003a17694663044a5f547bfc026 226 SUPERFAMILY SSF51366 4 220 4.87E-75 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NA29_RS22610 60056003a17694663044a5f547bfc026 226 PIRSF PIRSF001461 1 226 3.5E-105 T 09-03-2017 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NA29_RS22610 60056003a17694663044a5f547bfc026 226 Gene3D G3DSA:3.20.20.70 2 223 9.6E-97 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS22610 60056003a17694663044a5f547bfc026 226 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 206 5.6E-91 T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 NA29_RS23825 1a51205dab4e2bb57f34e999c0b75093 90 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 10 80 1.0E-30 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23825 1a51205dab4e2bb57f34e999c0b75093 90 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 10 80 2.1E-37 T 09-03-2017 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23825 1a51205dab4e2bb57f34e999c0b75093 90 ProSitePatterns PS00056 Ribosomal protein S17 signature. 61 73 - T 09-03-2017 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23825 1a51205dab4e2bb57f34e999c0b75093 90 SUPERFAMILY SSF50249 10 88 6.0E-33 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS23825 1a51205dab4e2bb57f34e999c0b75093 90 PRINTS PR00973 Ribosomal protein S17 family signature 71 78 1.1E-13 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23825 1a51205dab4e2bb57f34e999c0b75093 90 PRINTS PR00973 Ribosomal protein S17 family signature 29 52 1.1E-13 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23825 1a51205dab4e2bb57f34e999c0b75093 90 PRINTS PR00973 Ribosomal protein S17 family signature 61 71 1.1E-13 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23825 1a51205dab4e2bb57f34e999c0b75093 90 Gene3D G3DSA:2.40.50.140 10 87 1.1E-35 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS23825 1a51205dab4e2bb57f34e999c0b75093 90 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 8 86 25.418 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23825 1a51205dab4e2bb57f34e999c0b75093 90 Pfam PF00366 Ribosomal protein S17 15 81 3.3E-33 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS12935 d8b43e5723432cdb40db93b6fd187653 282 PIRSF PIRSF009120 1 247 1.8E-110 T 09-03-2017 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 NA29_RS12935 d8b43e5723432cdb40db93b6fd187653 282 Gene3D G3DSA:3.60.20.10 2 212 1.6E-11 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS12935 d8b43e5723432cdb40db93b6fd187653 282 SUPERFAMILY SSF56235 2 238 1.98E-30 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS15595 aae6c7fd994481cdadb4de07762bb43f 398 SUPERFAMILY SSF89796 9 396 5.36E-120 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS15595 aae6c7fd994481cdadb4de07762bb43f 398 Gene3D G3DSA:3.30.1540.10 230 305 2.2E-21 T 09-03-2017 NA29_RS15595 aae6c7fd994481cdadb4de07762bb43f 398 Gene3D G3DSA:3.40.50.10540 10 216 9.0E-94 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS15595 aae6c7fd994481cdadb4de07762bb43f 398 Gene3D G3DSA:3.40.50.10540 306 396 9.0E-94 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS15595 aae6c7fd994481cdadb4de07762bb43f 398 Pfam PF02515 CoA-transferase family III 12 373 1.1E-110 T 09-03-2017 IPR003673 CoA-transferase family III GO:0003824 NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 SUPERFAMILY SSF55826 218 391 1.19E-36 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 462 6.1E-47 T 09-03-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.8E-18 T 09-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.8E-18 T 09-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.8E-18 T 09-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.8E-18 T 09-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 Gene3D G3DSA:3.40.50.800 475 573 3.4E-29 T 09-03-2017 IPR004154 Anticodon-binding NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 570 2.9E-232 T 09-03-2017 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 Pfam PF03129 Anticodon binding domain 479 569 1.1E-16 T 09-03-2017 IPR004154 Anticodon-binding NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 SUPERFAMILY SSF52954 467 573 5.56E-30 T 09-03-2017 IPR004154 Anticodon-binding NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 Pfam PF04073 Aminoacyl-tRNA editing domain 257 381 2.9E-29 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 574 42.023 T 09-03-2017 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 SUPERFAMILY SSF55681 10 237 2.99E-104 T 09-03-2017 NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 SUPERFAMILY SSF55681 410 480 2.99E-104 T 09-03-2017 NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 Gene3D G3DSA:3.30.930.10 10 234 4.6E-105 T 09-03-2017 NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 Gene3D G3DSA:3.30.930.10 392 474 4.6E-105 T 09-03-2017 NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 Gene3D G3DSA:3.90.960.10 251 391 4.5E-31 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 NA29_RS22315 3574b46e8f000632edbc83cb662e576b 579 PIRSF PIRSF001535 1 577 1.4E-273 T 09-03-2017 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 NA29_RS00945 a190f3c5f9c0cedaecbaf25ffb584741 748 SUPERFAMILY SSF56519 53 265 5.89E-45 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 NA29_RS00945 a190f3c5f9c0cedaecbaf25ffb584741 748 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 251 1.5E-39 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 NA29_RS00945 a190f3c5f9c0cedaecbaf25ffb584741 748 SUPERFAMILY SSF56601 266 626 1.41E-99 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS00945 a190f3c5f9c0cedaecbaf25ffb584741 748 Pfam PF00905 Penicillin binding protein transpeptidase domain 283 623 5.1E-66 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NA29_RS00945 a190f3c5f9c0cedaecbaf25ffb584741 748 Gene3D G3DSA:3.40.710.10 265 631 3.6E-108 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS00945 a190f3c5f9c0cedaecbaf25ffb584741 748 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 17 626 4.4E-228 T 09-03-2017 IPR017790 Penicillin-binding protein 2 GO:0016020 NA29_RS00945 a190f3c5f9c0cedaecbaf25ffb584741 748 Gene3D G3DSA:3.90.1310.10 128 264 1.5E-35 T 09-03-2017 NA29_RS01815 5e98dcb45f27b101be32430a3db6838f 141 SUPERFAMILY SSF49503 30 140 1.39E-32 T 09-03-2017 IPR008972 Cupredoxin NA29_RS01815 5e98dcb45f27b101be32430a3db6838f 141 Gene3D G3DSA:2.60.40.420 19 140 7.5E-40 T 09-03-2017 IPR008972 Cupredoxin NA29_RS01815 5e98dcb45f27b101be32430a3db6838f 141 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 33 140 3.5E-10 T 09-03-2017 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 NA29_RS11855 c78e13174aa0bbabf200ad36692a8b1d 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 51 4.9E-11 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 NA29_RS11855 c78e13174aa0bbabf200ad36692a8b1d 343 Pfam PF13377 Periplasmic binding protein-like domain 176 335 1.9E-28 T 09-03-2017 NA29_RS11855 c78e13174aa0bbabf200ad36692a8b1d 343 Gene3D G3DSA:3.40.50.2300 57 178 2.8E-26 T 09-03-2017 NA29_RS11855 c78e13174aa0bbabf200ad36692a8b1d 343 SUPERFAMILY SSF53822 64 336 4.5E-57 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS11855 c78e13174aa0bbabf200ad36692a8b1d 343 Gene3D G3DSA:1.10.260.40 6 56 3.5E-19 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS11855 c78e13174aa0bbabf200ad36692a8b1d 343 Gene3D G3DSA:3.40.50.2300 179 316 7.1E-39 T 09-03-2017 NA29_RS11855 c78e13174aa0bbabf200ad36692a8b1d 343 SMART SM00354 4 74 1.7E-14 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 NA29_RS11855 c78e13174aa0bbabf200ad36692a8b1d 343 SUPERFAMILY SSF47413 4 62 4.61E-14 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS17045 14ef737517113fc377e984ef0a47b4ea 401 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 382 2.8E-46 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NA29_RS17045 14ef737517113fc377e984ef0a47b4ea 401 Gene3D G3DSA:2.40.50.100 184 215 9.1E-18 T 09-03-2017 NA29_RS17045 14ef737517113fc377e984ef0a47b4ea 401 Gene3D G3DSA:2.40.50.100 61 95 9.1E-18 T 09-03-2017 NA29_RS17045 14ef737517113fc377e984ef0a47b4ea 401 SUPERFAMILY SSF111369 53 264 1.07E-24 T 09-03-2017 NA29_RS17045 14ef737517113fc377e984ef0a47b4ea 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 53 266 3.7E-16 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NA29_RS16280 e993661e197f76b063c0248a0e47f5cd 306 Gene3D G3DSA:1.10.10.10 6 87 1.6E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16280 e993661e197f76b063c0248a0e47f5cd 306 Gene3D G3DSA:3.40.190.10 88 183 2.5E-20 T 09-03-2017 NA29_RS16280 e993661e197f76b063c0248a0e47f5cd 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.3E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16280 e993661e197f76b063c0248a0e47f5cd 306 Pfam PF03466 LysR substrate binding domain 92 296 3.0E-36 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS16280 e993661e197f76b063c0248a0e47f5cd 306 SUPERFAMILY SSF46785 5 116 1.2E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16280 e993661e197f76b063c0248a0e47f5cd 306 SUPERFAMILY SSF53850 95 301 6.67E-34 T 09-03-2017 NA29_RS16280 e993661e197f76b063c0248a0e47f5cd 306 Gene3D G3DSA:3.40.190.10 184 270 3.4E-7 T 09-03-2017 NA29_RS19985 e623ce8fb9e85ac1c04cf42c9d07cdc2 157 Pfam PF00866 Ring hydroxylating beta subunit 18 150 9.8E-15 T 09-03-2017 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 NA29_RS19985 e623ce8fb9e85ac1c04cf42c9d07cdc2 157 Gene3D G3DSA:3.10.450.50 2 151 9.8E-30 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS19985 e623ce8fb9e85ac1c04cf42c9d07cdc2 157 SUPERFAMILY SSF54427 1 157 9.76E-49 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS03925 31e738da6d6f93a9c0f347d9f6604ec7 472 Pfam PF00474 Sodium:solute symporter family 32 411 9.6E-18 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NA29_RS06540 dae5e46273ce0ddb62b5ef176201aaf2 309 Gene3D G3DSA:1.10.10.10 8 90 4.1E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06540 dae5e46273ce0ddb62b5ef176201aaf2 309 Gene3D G3DSA:3.40.190.10 176 271 1.9E-17 T 09-03-2017 NA29_RS06540 dae5e46273ce0ddb62b5ef176201aaf2 309 SUPERFAMILY SSF53850 94 305 2.81E-37 T 09-03-2017 NA29_RS06540 dae5e46273ce0ddb62b5ef176201aaf2 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 5.8E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06540 dae5e46273ce0ddb62b5ef176201aaf2 309 Gene3D G3DSA:3.40.190.10 94 175 5.9E-11 T 09-03-2017 NA29_RS06540 dae5e46273ce0ddb62b5ef176201aaf2 309 Pfam PF03466 LysR substrate binding domain 91 301 8.5E-40 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS06540 dae5e46273ce0ddb62b5ef176201aaf2 309 SUPERFAMILY SSF46785 5 107 2.38E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08850 957d10a544447200cc173485e298e628 531 Pfam PF00083 Sugar (and other) transporter 22 227 2.4E-27 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS08850 957d10a544447200cc173485e298e628 531 ProSitePatterns PS00217 Sugar transport proteins signature 2. 130 155 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS08850 957d10a544447200cc173485e298e628 531 SUPERFAMILY SSF103473 434 527 2.79E-51 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS08850 957d10a544447200cc173485e298e628 531 SUPERFAMILY SSF103473 20 338 2.79E-51 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS08850 957d10a544447200cc173485e298e628 531 Gene3D G3DSA:1.20.1250.20 249 337 1.5E-18 T 09-03-2017 NA29_RS08850 957d10a544447200cc173485e298e628 531 Gene3D G3DSA:1.20.1250.20 22 224 7.1E-21 T 09-03-2017 NA29_RS08850 957d10a544447200cc173485e298e628 531 Gene3D G3DSA:1.20.1250.20 430 524 1.5E-18 T 09-03-2017 NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 16 973 1.3E-277 T 09-03-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:3.40.50.300 1447 1569 5.2E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:3.40.50.300 860 990 7.2E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:3.40.50.300 641 722 7.2E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:3.40.50.300 507 620 1.2E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:3.40.50.300 1032 1094 5.2E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:3.40.50.300 5 63 1.2E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:3.40.50.300 1836 1962 1.7E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:3.40.50.300 1590 1649 1.7E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 SUPERFAMILY SSF52540 461 598 2.6E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 SUPERFAMILY SSF52540 16 164 2.6E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 ProSitePatterns PS00211 ABC transporters family signature. 1456 1470 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:1.20.1580.10 724 859 5.1E-40 T 09-03-2017 NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:1.20.1580.10 1709 1835 1.2E-48 T 09-03-2017 NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 ProSitePatterns PS00211 ABC transporters family signature. 1845 1859 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:1.20.1580.10 1130 1165 6.8E-50 T 09-03-2017 NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:1.20.1580.10 1375 1446 6.8E-50 T 09-03-2017 NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:1.20.1580.10 404 421 1.6E-38 T 09-03-2017 NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:1.20.1580.10 453 506 1.6E-38 T 09-03-2017 NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:1.20.1580.10 1300 1333 6.8E-50 T 09-03-2017 NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:1.20.1580.10 259 292 1.6E-38 T 09-03-2017 NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:1.20.1580.10 104 141 1.6E-38 T 09-03-2017 NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 SUPERFAMILY SSF52540 1399 1538 6.22E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 SUPERFAMILY SSF52540 1040 1240 6.22E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 Gene3D G3DSA:1.10.8.280 294 403 1.3E-18 T 09-03-2017 NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 SUPERFAMILY SSF52540 645 962 2.32E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 SMART SM00382 35 593 3.4 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 SMART SM00382 1609 1964 8.8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 SMART SM00382 663 956 0.19 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 SMART SM00382 1059 1533 1.5 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 ProSitePatterns PS00211 ABC transporters family signature. 869 883 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 SUPERFAMILY SSF52540 1591 1638 7.34E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00275 f54babad17fe6273d975cefb1b4905b1 1983 SUPERFAMILY SSF52540 1694 1938 7.34E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18010 537e36065fcf2beb41c7dace86a666a8 238 SUPERFAMILY SSF52402 6 187 5.58E-44 T 09-03-2017 NA29_RS18010 537e36065fcf2beb41c7dace86a666a8 238 Gene3D G3DSA:3.40.50.620 6 195 8.0E-50 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS18010 537e36065fcf2beb41c7dace86a666a8 238 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 30 223 5.8E-84 T 09-03-2017 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 NA29_RS18010 537e36065fcf2beb41c7dace86a666a8 238 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 27 199 1.8E-40 T 09-03-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 NA29_RS18010 537e36065fcf2beb41c7dace86a666a8 238 PIRSF PIRSF000857 3 230 6.3E-78 T 09-03-2017 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 NA29_RS04245 e3b126b5cc56cdccfe526663527b1e4b 698 SUPERFAMILY SSF51395 5 371 2.32E-79 T 09-03-2017 NA29_RS04245 e3b126b5cc56cdccfe526663527b1e4b 698 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 11 341 2.3E-61 T 09-03-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 NA29_RS04245 e3b126b5cc56cdccfe526663527b1e4b 698 Gene3D G3DSA:3.40.50.720 389 482 3.1E-23 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS04245 e3b126b5cc56cdccfe526663527b1e4b 698 SUPERFAMILY SSF51971 350 495 4.65E-28 T 09-03-2017 NA29_RS04245 e3b126b5cc56cdccfe526663527b1e4b 698 SUPERFAMILY SSF51905 533 668 2.59E-16 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS04245 e3b126b5cc56cdccfe526663527b1e4b 698 SUPERFAMILY SSF51905 388 446 2.59E-16 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS04245 e3b126b5cc56cdccfe526663527b1e4b 698 Gene3D G3DSA:3.20.20.70 8 380 7.5E-86 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS04245 e3b126b5cc56cdccfe526663527b1e4b 698 Gene3D G3DSA:3.50.50.60 483 632 2.6E-29 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS04245 e3b126b5cc56cdccfe526663527b1e4b 698 Pfam PF13450 NAD(P)-binding Rossmann-like domain 393 450 4.1E-10 T 09-03-2017 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.2E-121 T 09-03-2017 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 SUPERFAMILY SSF51905 1 314 5.67E-55 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 Gene3D G3DSA:3.50.50.60 5 110 2.5E-32 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 09-03-2017 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.6E-40 T 09-03-2017 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.6E-40 T 09-03-2017 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.6E-40 T 09-03-2017 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.6E-40 T 09-03-2017 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.6E-40 T 09-03-2017 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 9.3E-49 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 9.1E-77 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 9.1E-77 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 9.1E-77 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 9.1E-77 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 9.1E-77 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 9.1E-77 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 9.1E-77 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 9.1E-77 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 9.1E-77 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS17445 3391692f3fe1df6adb771f8e8d4f9bec 318 Gene3D G3DSA:3.50.50.60 111 307 3.3E-34 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS16100 e3c9c7d37e49ace85703cf34a755b571 170 Gene3D G3DSA:2.60.120.10 2 165 8.2E-64 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS16100 e3c9c7d37e49ace85703cf34a755b571 170 Pfam PF06172 Cupin superfamily (DUF985) 6 144 4.2E-48 T 09-03-2017 IPR009327 Cupin domain of unknown function DUF985 NA29_RS16100 e3c9c7d37e49ace85703cf34a755b571 170 SUPERFAMILY SSF51182 1 164 4.15E-61 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS09500 865a7b8fbf1636429c37c0d0f5ced088 348 Gene3D G3DSA:3.40.190.10 6 126 1.4E-23 T 09-03-2017 NA29_RS09500 865a7b8fbf1636429c37c0d0f5ced088 348 Gene3D G3DSA:3.40.190.10 274 338 1.4E-23 T 09-03-2017 NA29_RS09500 865a7b8fbf1636429c37c0d0f5ced088 348 Gene3D G3DSA:3.40.190.10 129 273 1.9E-29 T 09-03-2017 NA29_RS09500 865a7b8fbf1636429c37c0d0f5ced088 348 SUPERFAMILY SSF53850 27 344 3.07E-60 T 09-03-2017 NA29_RS09500 865a7b8fbf1636429c37c0d0f5ced088 348 Pfam PF13416 Bacterial extracellular solute-binding protein 47 309 4.4E-35 T 09-03-2017 NA29_RS09500 865a7b8fbf1636429c37c0d0f5ced088 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 96 109 9.5E-5 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 NA29_RS09500 865a7b8fbf1636429c37c0d0f5ced088 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 251 270 9.5E-5 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 NA29_RS09500 865a7b8fbf1636429c37c0d0f5ced088 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 52 73 9.5E-5 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 NA29_RS09500 865a7b8fbf1636429c37c0d0f5ced088 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 9.5E-5 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 Gene3D G3DSA:3.30.70.260 676 727 8.4E-4 T 09-03-2017 NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 Gene3D G3DSA:3.30.70.260 782 845 5.9E-13 T 09-03-2017 NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 SUPERFAMILY SSF55021 673 731 3.21E-8 T 09-03-2017 NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 Pfam PF01909 Nucleotidyltransferase domain 59 91 2.0E-4 T 09-03-2017 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 Pfam PF08335 GlnD PII-uridylyltransferase 164 302 7.9E-32 T 09-03-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 SMART SM00471 435 582 4.9E-4 T 09-03-2017 IPR003607 HD/PDEase domain NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 PIRSF PIRSF006288 1 854 0.0 T 09-03-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 SUPERFAMILY SSF55021 782 836 8.4E-11 T 09-03-2017 NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 854 320.299 T 09-03-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 Pfam PF01966 HD domain 440 555 1.3E-8 T 09-03-2017 IPR006674 HD domain NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 SUPERFAMILY SSF109604 406 530 2.42E-15 T 09-03-2017 NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 21 851 1.1E-241 T 09-03-2017 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 SUPERFAMILY SSF81593 175 292 1.41E-7 T 09-03-2017 NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 SUPERFAMILY SSF81301 40 156 7.63E-22 T 09-03-2017 NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 Gene3D G3DSA:1.10.3210.10 409 596 3.1E-25 T 09-03-2017 IPR006674 HD domain NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 Pfam PF01842 ACT domain 785 833 9.1E-7 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 NA29_RS13265 627af785e5b463117f34e44a82f71de2 854 Gene3D G3DSA:3.30.460.10 61 153 3.3E-8 T 09-03-2017 NA29_RS16350 2b6f66477e374c43f55699dac1dadbb8 419 Gene3D G3DSA:3.40.50.2300 40 172 2.3E-30 T 09-03-2017 NA29_RS16350 2b6f66477e374c43f55699dac1dadbb8 419 Gene3D G3DSA:3.40.50.2300 320 368 2.3E-30 T 09-03-2017 NA29_RS16350 2b6f66477e374c43f55699dac1dadbb8 419 Pfam PF13458 Periplasmic binding protein 43 382 3.5E-78 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS16350 2b6f66477e374c43f55699dac1dadbb8 419 Gene3D G3DSA:3.40.50.2300 175 319 1.3E-16 T 09-03-2017 NA29_RS16350 2b6f66477e374c43f55699dac1dadbb8 419 SUPERFAMILY SSF53822 43 417 1.03E-83 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS23505 59c3f88ff7a938d88f0ec6b639c19b9c 446 Gene3D G3DSA:3.65.10.10 44 241 3.6E-69 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 NA29_RS23505 59c3f88ff7a938d88f0ec6b639c19b9c 446 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 30 428 2.7E-102 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 NA29_RS23505 59c3f88ff7a938d88f0ec6b639c19b9c 446 SUPERFAMILY SSF55205 25 439 4.09E-135 T 09-03-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 NA29_RS23505 59c3f88ff7a938d88f0ec6b639c19b9c 446 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 24 438 45.238 T 09-03-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS23505 59c3f88ff7a938d88f0ec6b639c19b9c 446 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 25 437 3.6E-172 T 09-03-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS23505 59c3f88ff7a938d88f0ec6b639c19b9c 446 Gene3D G3DSA:3.65.10.10 242 439 3.0E-53 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 NA29_RS07655 63b3c46b838dc48edcc7f634c28a9e66 109 Gene3D G3DSA:3.10.20.30 4 96 1.7E-14 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS07655 63b3c46b838dc48edcc7f634c28a9e66 109 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 85 4.5E-8 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS07655 63b3c46b838dc48edcc7f634c28a9e66 109 SUPERFAMILY SSF54292 1 94 4.59E-16 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS01260 67af07c168d37948fe53ef7d9ec3277f 440 Gene3D G3DSA:1.20.1250.20 251 431 6.3E-23 T 09-03-2017 NA29_RS01260 67af07c168d37948fe53ef7d9ec3277f 440 SUPERFAMILY SSF103473 3 185 9.81E-67 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS01260 67af07c168d37948fe53ef7d9ec3277f 440 SUPERFAMILY SSF103473 234 435 9.81E-67 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS01260 67af07c168d37948fe53ef7d9ec3277f 440 Pfam PF07690 Major Facilitator Superfamily 6 396 6.4E-54 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS01260 67af07c168d37948fe53ef7d9ec3277f 440 Gene3D G3DSA:1.20.1250.20 3 187 3.1E-27 T 09-03-2017 NA29_RS01260 67af07c168d37948fe53ef7d9ec3277f 440 PRINTS PR01036 Tetracycline resistance protein TetB signature 96 116 2.3E-6 T 09-03-2017 NA29_RS01260 67af07c168d37948fe53ef7d9ec3277f 440 PRINTS PR01036 Tetracycline resistance protein TetB signature 126 150 2.3E-6 T 09-03-2017 NA29_RS01260 67af07c168d37948fe53ef7d9ec3277f 440 PRINTS PR01036 Tetracycline resistance protein TetB signature 5 29 2.3E-6 T 09-03-2017 NA29_RS01260 67af07c168d37948fe53ef7d9ec3277f 440 PRINTS PR01036 Tetracycline resistance protein TetB signature 288 312 2.3E-6 T 09-03-2017 NA29_RS00270 1e607a53e31be0101d1e184b78099810 176 Gene3D G3DSA:1.10.1740.10 12 110 1.9E-8 T 09-03-2017 NA29_RS00270 1e607a53e31be0101d1e184b78099810 176 SUPERFAMILY SSF88659 113 170 5.23E-12 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS00270 1e607a53e31be0101d1e184b78099810 176 Gene3D G3DSA:1.10.10.10 118 169 9.3E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00270 1e607a53e31be0101d1e184b78099810 176 SUPERFAMILY SSF88946 15 108 5.1E-11 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS00270 1e607a53e31be0101d1e184b78099810 176 Pfam PF08281 Sigma-70, region 4 119 170 2.5E-13 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS00270 1e607a53e31be0101d1e184b78099810 176 Pfam PF04542 Sigma-70 region 2 22 87 1.6E-7 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS00270 1e607a53e31be0101d1e184b78099810 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 167 4.2E-15 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS18945 863e08f53de4ee4c0828772b8427b94d 289 Gene3D G3DSA:1.10.10.10 1 79 7.5E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18945 863e08f53de4ee4c0828772b8427b94d 289 SUPERFAMILY SSF53850 87 280 3.35E-32 T 09-03-2017 NA29_RS18945 863e08f53de4ee4c0828772b8427b94d 289 Gene3D G3DSA:3.40.190.10 85 192 6.7E-16 T 09-03-2017 NA29_RS18945 863e08f53de4ee4c0828772b8427b94d 289 Gene3D G3DSA:3.40.190.10 193 262 4.5E-10 T 09-03-2017 NA29_RS18945 863e08f53de4ee4c0828772b8427b94d 289 Pfam PF03466 LysR substrate binding domain 88 280 4.3E-34 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS18945 863e08f53de4ee4c0828772b8427b94d 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.1E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18945 863e08f53de4ee4c0828772b8427b94d 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.1E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18945 863e08f53de4ee4c0828772b8427b94d 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.1E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18945 863e08f53de4ee4c0828772b8427b94d 289 SUPERFAMILY SSF46785 1 99 7.18E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18945 863e08f53de4ee4c0828772b8427b94d 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.3E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS07480 01639799dab224c646bbaf7beaed1d65 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 64 2.8E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS07480 01639799dab224c646bbaf7beaed1d65 303 Gene3D G3DSA:1.10.10.10 5 85 7.9E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07480 01639799dab224c646bbaf7beaed1d65 303 SUPERFAMILY SSF46785 6 85 1.36E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07480 01639799dab224c646bbaf7beaed1d65 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.7E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS07480 01639799dab224c646bbaf7beaed1d65 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.7E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS07480 01639799dab224c646bbaf7beaed1d65 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.7E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS07480 01639799dab224c646bbaf7beaed1d65 303 SUPERFAMILY SSF53850 93 294 5.25E-36 T 09-03-2017 NA29_RS07480 01639799dab224c646bbaf7beaed1d65 303 Gene3D G3DSA:3.40.190.10 93 191 4.1E-31 T 09-03-2017 NA29_RS07480 01639799dab224c646bbaf7beaed1d65 303 Pfam PF03466 LysR substrate binding domain 91 290 1.6E-33 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS16120 3430dab3a98917a8422dcbe6c365ab17 164 Gene3D G3DSA:3.30.70.920 59 143 7.2E-20 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS16120 3430dab3a98917a8422dcbe6c365ab17 164 SUPERFAMILY SSF46785 5 65 1.57E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16120 3430dab3a98917a8422dcbe6c365ab17 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.8E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS16120 3430dab3a98917a8422dcbe6c365ab17 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.8E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS16120 3430dab3a98917a8422dcbe6c365ab17 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.8E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS16120 3430dab3a98917a8422dcbe6c365ab17 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 52 3.7E-16 T 09-03-2017 NA29_RS16120 3430dab3a98917a8422dcbe6c365ab17 164 Pfam PF01037 Lrp/AsnC ligand binding domain 72 143 6.2E-16 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS16120 3430dab3a98917a8422dcbe6c365ab17 164 Gene3D G3DSA:1.10.10.10 4 55 5.9E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16120 3430dab3a98917a8422dcbe6c365ab17 164 SUPERFAMILY SSF54909 68 146 7.78E-14 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS16120 3430dab3a98917a8422dcbe6c365ab17 164 SMART SM00344 6 115 1.1E-33 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NA29_RS01465 423f703892f56c65bef1c7ce488c99cb 482 Gene3D G3DSA:3.40.640.10 153 366 5.3E-72 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS01465 423f703892f56c65bef1c7ce488c99cb 482 Gene3D G3DSA:3.90.1150.10 367 465 9.1E-6 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS01465 423f703892f56c65bef1c7ce488c99cb 482 SUPERFAMILY SSF46785 10 84 2.72E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01465 423f703892f56c65bef1c7ce488c99cb 482 SUPERFAMILY SSF53383 124 473 8.34E-84 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS01465 423f703892f56c65bef1c7ce488c99cb 482 SMART SM00345 21 80 4.3E-11 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS01465 423f703892f56c65bef1c7ce488c99cb 482 Gene3D G3DSA:1.10.10.10 8 81 9.5E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01465 423f703892f56c65bef1c7ce488c99cb 482 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 1.6E-12 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS01465 423f703892f56c65bef1c7ce488c99cb 482 Pfam PF00155 Aminotransferase class I and II 154 472 2.6E-36 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS22040 91cccc5db0b07bb329bffc8739687693 759 PIRSF PIRSF036389 12 746 8.7E-216 T 09-03-2017 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related NA29_RS22040 91cccc5db0b07bb329bffc8739687693 759 SUPERFAMILY SSF56003 14 258 5.58E-35 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS22040 91cccc5db0b07bb329bffc8739687693 759 SUPERFAMILY SSF56003 332 738 2.62E-101 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS22040 91cccc5db0b07bb329bffc8739687693 759 Gene3D G3DSA:3.30.365.10 66 197 2.6E-33 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS22040 91cccc5db0b07bb329bffc8739687693 759 Gene3D G3DSA:3.30.365.10 308 322 2.6E-33 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS22040 91cccc5db0b07bb329bffc8739687693 759 Gene3D G3DSA:3.90.1170.50 200 307 7.4E-16 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS22040 91cccc5db0b07bb329bffc8739687693 759 Gene3D G3DSA:3.30.365.10 568 745 2.2E-32 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS22040 91cccc5db0b07bb329bffc8739687693 759 SMART SM01008 230 309 4.4E-16 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS22040 91cccc5db0b07bb329bffc8739687693 759 Gene3D G3DSA:3.30.365.10 406 567 3.3E-33 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS22040 91cccc5db0b07bb329bffc8739687693 759 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 333 569 1.7E-34 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS22040 91cccc5db0b07bb329bffc8739687693 759 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 604 693 2.0E-8 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS22040 91cccc5db0b07bb329bffc8739687693 759 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 65 203 9.5E-12 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS24840 39d9249f91471297d6be828182007b79 160 Pfam PF03748 Flagellar basal body-associated protein FliL 60 160 5.5E-26 T 09-03-2017 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 NA29_RS04620 87449d8551a9b21b839f44d5133b4936 610 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 9 606 1.0E-289 T 09-03-2017 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 NA29_RS04620 87449d8551a9b21b839f44d5133b4936 610 SUPERFAMILY SSF52016 426 607 2.82E-54 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS04620 87449d8551a9b21b839f44d5133b4936 610 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 161 171 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS04620 87449d8551a9b21b839f44d5133b4936 610 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 512 523 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS04620 87449d8551a9b21b839f44d5133b4936 610 SUPERFAMILY SSF143975 8 425 1.44E-143 T 09-03-2017 NA29_RS04620 87449d8551a9b21b839f44d5133b4936 610 Pfam PF00920 Dehydratase family 72 603 7.9E-159 T 09-03-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS20675 8e1f65bc86790ba7b5057a9ca72d0f61 297 SUPERFAMILY SSF103481 43 144 1.96E-14 T 09-03-2017 NA29_RS20675 8e1f65bc86790ba7b5057a9ca72d0f61 297 SUPERFAMILY SSF103481 196 295 7.32E-9 T 09-03-2017 NA29_RS20675 8e1f65bc86790ba7b5057a9ca72d0f61 297 Pfam PF00892 EamA-like transporter family 160 295 4.0E-16 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS20675 8e1f65bc86790ba7b5057a9ca72d0f61 297 Pfam PF00892 EamA-like transporter family 5 137 9.1E-18 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS02000 38f770ff63d2756fd66359116b7a68f8 261 SUPERFAMILY SSF52540 17 235 2.3E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02000 38f770ff63d2756fd66359116b7a68f8 261 Pfam PF13500 AAA domain 17 226 1.1E-36 T 09-03-2017 NA29_RS02000 38f770ff63d2756fd66359116b7a68f8 261 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 19 192 4.2E-45 T 09-03-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 NA29_RS02000 38f770ff63d2756fd66359116b7a68f8 261 Gene3D G3DSA:3.40.50.300 17 236 2.5E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02000 38f770ff63d2756fd66359116b7a68f8 261 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 15 230 28.541 T 09-03-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 NA29_RS02000 38f770ff63d2756fd66359116b7a68f8 261 PIRSF PIRSF006755 14 246 1.4E-65 T 09-03-2017 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 NA29_RS24650 f2d7b6c69fe4a31669c953fc15ae1730 467 Gene3D G3DSA:3.30.1330.90 11 157 1.4E-52 T 09-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 NA29_RS24650 f2d7b6c69fe4a31669c953fc15ae1730 467 Pfam PF03315 Serine dehydratase beta chain 4 156 1.7E-56 T 09-03-2017 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 NA29_RS24650 f2d7b6c69fe4a31669c953fc15ae1730 467 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 464 4.4E-211 T 09-03-2017 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 NA29_RS24650 f2d7b6c69fe4a31669c953fc15ae1730 467 SUPERFAMILY SSF143548 17 157 5.23E-45 T 09-03-2017 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 NA29_RS24650 f2d7b6c69fe4a31669c953fc15ae1730 467 Pfam PF03313 Serine dehydratase alpha chain 188 461 7.0E-105 T 09-03-2017 IPR005130 Serine dehydratase-like, alpha subunit NA29_RS18220 323ce4caa4745cdf8f99371abdc1f787 272 SUPERFAMILY SSF55347 129 241 7.19E-33 T 09-03-2017 NA29_RS18220 323ce4caa4745cdf8f99371abdc1f787 272 SUPERFAMILY SSF51735 10 158 8.71E-22 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18220 323ce4caa4745cdf8f99371abdc1f787 272 Gene3D G3DSA:3.40.50.720 8 127 1.7E-10 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18220 323ce4caa4745cdf8f99371abdc1f787 272 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 15 123 5.7E-16 T 09-03-2017 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 NA29_RS18220 323ce4caa4745cdf8f99371abdc1f787 272 Gene3D G3DSA:3.30.360.10 129 242 2.3E-37 T 09-03-2017 NA29_RS18220 323ce4caa4745cdf8f99371abdc1f787 272 Pfam PF01958 Domain of unknown function DUF108 173 260 7.3E-35 T 09-03-2017 IPR002811 Aspartate dehydrogenase GO:0006742|GO:0016491|GO:0019363|GO:0055114 KEGG: 00760+1.4.1.21 NA29_RS18220 323ce4caa4745cdf8f99371abdc1f787 272 Hamap MF_01265 Probable L-aspartate dehydrogenase [nadX]. 8 272 35.865 T 09-03-2017 IPR020626 L-aspartate dehydrogenase, prokaryotic GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 NA29_RS18220 323ce4caa4745cdf8f99371abdc1f787 272 PIRSF PIRSF005227 6 272 4.0E-81 T 09-03-2017 IPR011182 L-aspartate dehydrogenase GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 NA29_RS13420 23f33f3b0d23044de8bc4cbb3c26ac94 267 Pfam PF02592 Putative vitamin uptake transporter 67 229 1.2E-26 T 09-03-2017 IPR003744 Protein of unknown function DUF165 NA29_RS10560 a8d8675a72301ebecbb12625b6cdad42 184 Pfam PF00578 AhpC/TSA family 31 158 3.8E-26 T 09-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 NA29_RS10560 a8d8675a72301ebecbb12625b6cdad42 184 SUPERFAMILY SSF52833 26 179 1.42E-39 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS10560 a8d8675a72301ebecbb12625b6cdad42 184 Gene3D G3DSA:3.40.30.10 28 178 2.0E-35 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS15675 0b5a9b778565cdb9ab726eb1733185c0 201 PIRSF PIRSF016183 3 179 1.3E-66 T 09-03-2017 IPR006839 Ribosome-associated, YjgA NA29_RS15675 0b5a9b778565cdb9ab726eb1733185c0 201 Gene3D G3DSA:1.10.60.30 30 99 5.4E-29 T 09-03-2017 IPR023153 PSPTO4464-like domain NA29_RS15675 0b5a9b778565cdb9ab726eb1733185c0 201 Pfam PF04751 Protein of unknown function (DUF615) 19 172 1.5E-55 T 09-03-2017 IPR006839 Ribosome-associated, YjgA NA29_RS15675 0b5a9b778565cdb9ab726eb1733185c0 201 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 14 176 22.675 T 09-03-2017 IPR006839 Ribosome-associated, YjgA NA29_RS15675 0b5a9b778565cdb9ab726eb1733185c0 201 SUPERFAMILY SSF158710 30 174 2.09E-49 T 09-03-2017 NA29_RS15675 0b5a9b778565cdb9ab726eb1733185c0 201 Gene3D G3DSA:1.10.60.30 108 177 2.9E-31 T 09-03-2017 IPR023153 PSPTO4464-like domain NA29_RS25010 455aad1450ed73fcb532b2a043d73be7 601 SUPERFAMILY SSF47170 30 163 2.09E-8 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 NA29_RS25010 455aad1450ed73fcb532b2a043d73be7 601 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 511 5.5E-63 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS25010 455aad1450ed73fcb532b2a043d73be7 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 9.6E-62 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS25010 455aad1450ed73fcb532b2a043d73be7 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 9.6E-62 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS25010 455aad1450ed73fcb532b2a043d73be7 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 9.6E-62 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS25010 455aad1450ed73fcb532b2a043d73be7 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 9.6E-62 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS25010 455aad1450ed73fcb532b2a043d73be7 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 9.6E-62 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS25010 455aad1450ed73fcb532b2a043d73be7 601 SMART SM00304 212 264 9.5E-11 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS25010 455aad1450ed73fcb532b2a043d73be7 601 SUPERFAMILY SSF58104 232 516 1.83E-74 T 09-03-2017 NA29_RS25010 455aad1450ed73fcb532b2a043d73be7 601 Pfam PF00672 HAMP domain 193 261 3.2E-8 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS25010 455aad1450ed73fcb532b2a043d73be7 601 Gene3D G3DSA:1.20.120.30 52 146 1.3E-5 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 NA29_RS25010 455aad1450ed73fcb532b2a043d73be7 601 Pfam PF02203 Tar ligand binding domain homologue 1 174 4.8E-42 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 NA29_RS25010 455aad1450ed73fcb532b2a043d73be7 601 SMART SM00283 265 512 1.1E-94 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS25010 455aad1450ed73fcb532b2a043d73be7 601 Gene3D G3DSA:1.10.287.950 279 484 4.0E-62 T 09-03-2017 NA29_RS22350 4e653474a6f918a0c9b6bb3cf33d4d14 326 Gene3D G3DSA:1.10.600.10 7 325 7.0E-99 T 09-03-2017 IPR008949 Isoprenoid synthase domain NA29_RS22350 4e653474a6f918a0c9b6bb3cf33d4d14 326 Pfam PF00348 Polyprenyl synthetase 36 266 1.2E-72 T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 NA29_RS22350 4e653474a6f918a0c9b6bb3cf33d4d14 326 SUPERFAMILY SSF48576 6 325 3.36E-98 T 09-03-2017 IPR008949 Isoprenoid synthase domain NA29_RS22350 4e653474a6f918a0c9b6bb3cf33d4d14 326 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 85 99 - T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 NA29_RS19495 361b8249a380ad8348e093fa35a1f9f2 345 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 23 82 2.0E-15 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS19495 361b8249a380ad8348e093fa35a1f9f2 345 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 53 82 2.5E-9 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS19495 361b8249a380ad8348e093fa35a1f9f2 345 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 24 51 2.5E-9 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS19495 361b8249a380ad8348e093fa35a1f9f2 345 Gene3D G3DSA:3.30.450.20 153 236 1.3E-7 T 09-03-2017 NA29_RS19495 361b8249a380ad8348e093fa35a1f9f2 345 SUPERFAMILY SSF58104 20 92 4.19E-20 T 09-03-2017 NA29_RS19495 361b8249a380ad8348e093fa35a1f9f2 345 Gene3D G3DSA:1.10.287.950 20 92 7.9E-20 T 09-03-2017 NA29_RS16610 2915b3624f437b54bda5355e912b22c2 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 6.7E-32 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16610 2915b3624f437b54bda5355e912b22c2 301 Gene3D G3DSA:1.10.3720.10 89 296 9.3E-32 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16610 2915b3624f437b54bda5355e912b22c2 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 75 7.0E-15 T 09-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain NA29_RS16610 2915b3624f437b54bda5355e912b22c2 301 SUPERFAMILY SSF161098 93 280 4.19E-31 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS09730 e66a77ff8175ce4764fc986c8139d15b 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 1.1E-62 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS09730 e66a77ff8175ce4764fc986c8139d15b 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 1.1E-62 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS09730 e66a77ff8175ce4764fc986c8139d15b 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 1.1E-62 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS09730 e66a77ff8175ce4764fc986c8139d15b 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 61 76 1.1E-62 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS09730 e66a77ff8175ce4764fc986c8139d15b 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 1.1E-62 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS09730 e66a77ff8175ce4764fc986c8139d15b 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.1E-62 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS09730 e66a77ff8175ce4764fc986c8139d15b 540 SUPERFAMILY SSF58104 234 513 1.02E-73 T 09-03-2017 NA29_RS09730 e66a77ff8175ce4764fc986c8139d15b 540 SMART SM00304 212 264 1.2E-8 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS09730 e66a77ff8175ce4764fc986c8139d15b 540 SUPERFAMILY SSF47170 43 148 1.46E-6 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 NA29_RS09730 e66a77ff8175ce4764fc986c8139d15b 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 511 1.7E-62 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS09730 e66a77ff8175ce4764fc986c8139d15b 540 Pfam PF00672 HAMP domain 193 259 1.8E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS09730 e66a77ff8175ce4764fc986c8139d15b 540 Pfam PF02203 Tar ligand binding domain homologue 1 171 5.8E-44 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 NA29_RS09730 e66a77ff8175ce4764fc986c8139d15b 540 Gene3D G3DSA:1.10.287.950 280 484 1.4E-63 T 09-03-2017 NA29_RS09730 e66a77ff8175ce4764fc986c8139d15b 540 SMART SM00283 265 512 1.9E-90 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS04370 c4a681dcc2562a26ef03e139976c5b51 1331 Pfam PF12447 Protein of unknown function (DUF3683) 23 147 2.7E-51 T 09-03-2017 IPR022153 Protein of unknown function DUF3683 NA29_RS04370 c4a681dcc2562a26ef03e139976c5b51 1331 SUPERFAMILY SSF56176 162 428 1.14E-51 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS04370 c4a681dcc2562a26ef03e139976c5b51 1331 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 923 934 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS04370 c4a681dcc2562a26ef03e139976c5b51 1331 Pfam PF02913 FAD linked oxidases, C-terminal domain 458 579 1.3E-4 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 NA29_RS04370 c4a681dcc2562a26ef03e139976c5b51 1331 Pfam PF02913 FAD linked oxidases, C-terminal domain 730 818 3.6E-17 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 NA29_RS04370 c4a681dcc2562a26ef03e139976c5b51 1331 Pfam PF13183 4Fe-4S dicluster domain 858 937 1.9E-7 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NA29_RS04370 c4a681dcc2562a26ef03e139976c5b51 1331 Gene3D G3DSA:3.30.43.10 152 313 2.6E-31 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NA29_RS04370 c4a681dcc2562a26ef03e139976c5b51 1331 Gene3D G3DSA:1.10.1060.10 855 956 1.2E-14 T 09-03-2017 NA29_RS04370 c4a681dcc2562a26ef03e139976c5b51 1331 Pfam PF01565 FAD binding domain 197 342 8.9E-23 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NA29_RS04370 c4a681dcc2562a26ef03e139976c5b51 1331 Pfam PF11880 Domain of unknown function (DUF3400) 1287 1331 2.2E-22 T 09-03-2017 IPR021817 Protein of unknown function DUF3400 NA29_RS04370 c4a681dcc2562a26ef03e139976c5b51 1331 SUPERFAMILY SSF55103 738 819 7.29E-36 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NA29_RS04370 c4a681dcc2562a26ef03e139976c5b51 1331 SUPERFAMILY SSF55103 458 592 7.29E-36 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NA29_RS04370 c4a681dcc2562a26ef03e139976c5b51 1331 SUPERFAMILY SSF46548 831 953 7.85E-14 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 NA29_RS04370 c4a681dcc2562a26ef03e139976c5b51 1331 Pfam PF02754 Cysteine-rich domain 1193 1284 1.8E-5 T 09-03-2017 IPR004017 Cysteine-rich domain NA29_RS04370 c4a681dcc2562a26ef03e139976c5b51 1331 Pfam PF02754 Cysteine-rich domain 1068 1157 2.0E-6 T 09-03-2017 IPR004017 Cysteine-rich domain NA29_RS22615 745e455c20dee061c141c69ee0c1859f 238 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 197 1.4E-11 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS22615 745e455c20dee061c141c69ee0c1859f 238 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 15 221 2.9E-63 T 09-03-2017 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 NA29_RS22615 745e455c20dee061c141c69ee0c1859f 238 Gene3D G3DSA:1.10.150.240 30 93 4.4E-10 T 09-03-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 NA29_RS22615 745e455c20dee061c141c69ee0c1859f 238 Gene3D G3DSA:3.40.50.1000 94 228 5.2E-43 T 09-03-2017 IPR023214 HAD-like domain NA29_RS22615 745e455c20dee061c141c69ee0c1859f 238 Gene3D G3DSA:3.40.50.1000 9 29 5.2E-43 T 09-03-2017 IPR023214 HAD-like domain NA29_RS22615 745e455c20dee061c141c69ee0c1859f 238 SUPERFAMILY SSF56784 10 228 1.73E-55 T 09-03-2017 IPR023214 HAD-like domain NA29_RS22615 745e455c20dee061c141c69ee0c1859f 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 114 193 1.3E-8 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS22615 745e455c20dee061c141c69ee0c1859f 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 198 2.5E-32 T 09-03-2017 IPR023214 HAD-like domain NA29_RS22615 745e455c20dee061c141c69ee0c1859f 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 4.9E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS22615 745e455c20dee061c141c69ee0c1859f 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 4.9E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS22615 745e455c20dee061c141c69ee0c1859f 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 12 23 4.9E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS02860 76a3af2d415114af9ae72f6eeb6f6166 152 SUPERFAMILY SSF46689 1 42 8.72E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS02860 76a3af2d415114af9ae72f6eeb6f6166 152 Gene3D G3DSA:1.10.357.10 1 134 5.0E-20 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS07095 a87630b1886144e26411ca14fc85ed09 620 SUPERFAMILY SSF90123 26 321 5.89E-33 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NA29_RS07095 a87630b1886144e26411ca14fc85ed09 620 Pfam PF00664 ABC transporter transmembrane region 33 299 4.4E-12 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NA29_RS07095 a87630b1886144e26411ca14fc85ed09 620 Gene3D G3DSA:3.40.50.300 357 597 1.0E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07095 a87630b1886144e26411ca14fc85ed09 620 ProSitePatterns PS00211 ABC transporters family signature. 498 512 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS07095 a87630b1886144e26411ca14fc85ed09 620 Gene3D G3DSA:1.20.1560.10 26 321 1.1E-28 T 09-03-2017 NA29_RS07095 a87630b1886144e26411ca14fc85ed09 620 SMART SM00382 390 572 2.2E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS07095 a87630b1886144e26411ca14fc85ed09 620 SUPERFAMILY SSF52540 361 596 3.66E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07095 a87630b1886144e26411ca14fc85ed09 620 Pfam PF00005 ABC transporter 383 526 3.4E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS10730 b08680b37510dc892a0b9e9533521565 432 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 47 429 1.8E-159 T 09-03-2017 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 NA29_RS10730 b08680b37510dc892a0b9e9533521565 432 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 27 421 3.1E-88 T 09-03-2017 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like NA29_RS10730 b08680b37510dc892a0b9e9533521565 432 Pfam PF03486 HI0933-like protein 26 422 5.5E-109 T 09-03-2017 NA29_RS10730 b08680b37510dc892a0b9e9533521565 432 Gene3D G3DSA:3.50.50.60 25 216 1.3E-36 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS10730 b08680b37510dc892a0b9e9533521565 432 Gene3D G3DSA:3.50.50.60 370 425 1.3E-36 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS10730 b08680b37510dc892a0b9e9533521565 432 SUPERFAMILY SSF160996 219 367 1.07E-9 T 09-03-2017 NA29_RS10730 b08680b37510dc892a0b9e9533521565 432 PRINTS PR00419 Adrenodoxin reductase family signature 26 48 5.5E-7 T 09-03-2017 NA29_RS10730 b08680b37510dc892a0b9e9533521565 432 PRINTS PR00419 Adrenodoxin reductase family signature 49 62 5.5E-7 T 09-03-2017 NA29_RS10730 b08680b37510dc892a0b9e9533521565 432 SUPERFAMILY SSF51905 25 217 4.46E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS10730 b08680b37510dc892a0b9e9533521565 432 SUPERFAMILY SSF51905 368 425 4.46E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS06520 20ad98d92ce07b1e7c8f9f46233f9e26 258 Pfam PF03797 Autotransporter beta-domain 7 238 2.6E-41 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS06520 20ad98d92ce07b1e7c8f9f46233f9e26 258 SMART SM00869 1 248 1.7E-29 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS06520 20ad98d92ce07b1e7c8f9f46233f9e26 258 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 8 258 4.4E-23 T 09-03-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 NA29_RS06520 20ad98d92ce07b1e7c8f9f46233f9e26 258 SUPERFAMILY SSF103515 6 258 5.36E-47 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS06520 20ad98d92ce07b1e7c8f9f46233f9e26 258 Gene3D G3DSA:2.40.128.130 7 258 3.6E-43 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 Gene3D G3DSA:3.20.20.60 262 573 6.9E-104 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 SUPERFAMILY SSF52009 128 251 2.35E-31 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 258 547 2.5E-112 T 09-03-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 Gene3D G3DSA:3.50.30.10 136 261 5.1E-42 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 1.2E-29 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 Pfam PF00391 PEP-utilising enzyme, mobile domain 160 231 7.9E-23 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 299 318 4.9E-27 T 09-03-2017 NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 507 519 4.9E-27 T 09-03-2017 NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 454 469 4.9E-27 T 09-03-2017 NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 471 486 4.9E-27 T 09-03-2017 NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 Gene3D G3DSA:1.10.274.10 27 135 3.2E-35 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 SUPERFAMILY SSF51621 255 554 9.95E-102 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 PIRSF PIRSF000732 2 578 2.2E-214 T 09-03-2017 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 454 472 - T 09-03-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 SUPERFAMILY SSF47831 27 146 1.14E-31 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 570 1.8E-167 T 09-03-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 NA29_RS02420 f440f2ea8a04ed58407afd532bdd1771 578 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 190 201 - T 09-03-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 NA29_RS05770 11ab9ff57bc40db62f4eb0340ced7453 417 PIRSF PIRSF038800 1 408 1.5E-143 T 09-03-2017 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 NA29_RS05770 11ab9ff57bc40db62f4eb0340ced7453 417 Hamap MF_01970 Kynureninase [kynU]. 2 400 35.179 T 09-03-2017 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 NA29_RS05770 11ab9ff57bc40db62f4eb0340ced7453 417 Pfam PF00266 Aminotransferase class-V 80 350 2.5E-13 T 09-03-2017 IPR000192 Aminotransferase class V domain NA29_RS05770 11ab9ff57bc40db62f4eb0340ced7453 417 SUPERFAMILY SSF53383 5 400 2.42E-84 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS05770 11ab9ff57bc40db62f4eb0340ced7453 417 Gene3D G3DSA:3.90.1150.10 257 417 5.8E-65 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS05770 11ab9ff57bc40db62f4eb0340ced7453 417 TIGRFAM TIGR01814 kynureninase: kynureninase 9 400 2.8E-106 T 09-03-2017 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 NA29_RS05770 11ab9ff57bc40db62f4eb0340ced7453 417 Gene3D G3DSA:3.40.640.10 31 256 1.1E-16 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS13505 8d83205743b664999292605ed2e5cdd1 388 Gene3D G3DSA:3.90.1150.10 256 385 2.0E-37 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS13505 8d83205743b664999292605ed2e5cdd1 388 SUPERFAMILY SSF53383 13 383 5.36E-107 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS13505 8d83205743b664999292605ed2e5cdd1 388 PIRSF PIRSF000390 10 387 5.1E-105 T 09-03-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NA29_RS13505 8d83205743b664999292605ed2e5cdd1 388 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 21 379 6.6E-111 T 09-03-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NA29_RS13505 8d83205743b664999292605ed2e5cdd1 388 Gene3D G3DSA:3.40.640.10 13 253 3.3E-80 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS23915 91726c127724856a3943c19188a5b965 263 Gene3D G3DSA:2.60.120.10 14 89 2.5E-11 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS23915 91726c127724856a3943c19188a5b965 263 Gene3D G3DSA:1.10.10.60 155 211 1.0E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS23915 91726c127724856a3943c19188a5b965 263 Pfam PF02311 AraC-like ligand binding domain 26 115 1.7E-6 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS23915 91726c127724856a3943c19188a5b965 263 Pfam PF12833 Helix-turn-helix domain 180 258 4.4E-24 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS23915 91726c127724856a3943c19188a5b965 263 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 252 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS23915 91726c127724856a3943c19188a5b965 263 SUPERFAMILY SSF51182 13 183 1.3E-17 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS23915 91726c127724856a3943c19188a5b965 263 SUPERFAMILY SSF46689 211 258 4.21E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS23915 91726c127724856a3943c19188a5b965 263 Gene3D G3DSA:1.10.10.60 212 255 5.5E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS23915 91726c127724856a3943c19188a5b965 263 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 256 3.3E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS23915 91726c127724856a3943c19188a5b965 263 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 240 3.3E-7 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS23915 91726c127724856a3943c19188a5b965 263 SMART SM00342 174 256 6.3E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 Gene3D G3DSA:3.30.1490.20 130 153 9.3E-30 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 Gene3D G3DSA:3.30.1490.20 210 258 9.3E-30 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 935 0.0 T 09-03-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 ProSitePatterns PS00211 ABC transporters family signature. 840 854 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 Gene3D G3DSA:3.40.50.300 831 948 1.6E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 Gene3D G3DSA:3.40.50.300 615 687 1.6E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 Gene3D G3DSA:3.40.50.300 490 608 1.9E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 Gene3D G3DSA:3.40.50.300 2 51 1.9E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 Gene3D G3DSA:1.20.1580.10 415 489 4.8E-50 T 09-03-2017 NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 Gene3D G3DSA:1.20.1580.10 259 292 4.8E-50 T 09-03-2017 NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 Gene3D G3DSA:1.20.1580.10 91 129 4.8E-50 T 09-03-2017 NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 SUPERFAMILY SSF52540 449 581 4.8E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 SUPERFAMILY SSF52540 1 204 4.8E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 Gene3D G3DSA:1.20.1580.10 704 830 1.4E-54 T 09-03-2017 NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 Gene3D G3DSA:1.10.8.280 295 414 6.1E-43 T 09-03-2017 NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 SUPERFAMILY SSF52540 632 923 1.03E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03010 7b2dbe2af8b9abcccd6ec5538ceb8c73 954 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 950 22.369 T 09-03-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 NA29_RS10055 9065335a2674ba354c7fd4d9d0191dee 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 440 1.0E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS10055 9065335a2674ba354c7fd4d9d0191dee 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 420 1.0E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS10055 9065335a2674ba354c7fd4d9d0191dee 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 1.0E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS10055 9065335a2674ba354c7fd4d9d0191dee 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 1.0E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS10055 9065335a2674ba354c7fd4d9d0191dee 443 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 286 1.1E-8 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS10055 9065335a2674ba354c7fd4d9d0191dee 443 Pfam PF00672 HAMP domain 160 225 1.3E-10 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS10055 9065335a2674ba354c7fd4d9d0191dee 443 Gene3D G3DSA:3.30.565.10 292 442 2.1E-35 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS10055 9065335a2674ba354c7fd4d9d0191dee 443 SUPERFAMILY SSF55874 280 441 1.57E-33 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS10055 9065335a2674ba354c7fd4d9d0191dee 443 SUPERFAMILY SSF47384 215 286 5.69E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS10055 9065335a2674ba354c7fd4d9d0191dee 443 SMART SM00304 177 229 2.6E-6 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS10055 9065335a2674ba354c7fd4d9d0191dee 443 Pfam PF16524 Periplasmic domain of Sensor histidine kinase RisS 43 149 8.4E-39 T 09-03-2017 IPR032408 Sensor histidine kinase RisS, periplasmic domain NA29_RS10055 9065335a2674ba354c7fd4d9d0191dee 443 Gene3D G3DSA:1.10.287.130 220 285 2.6E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS10055 9065335a2674ba354c7fd4d9d0191dee 443 SMART SM00388 230 289 8.4E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS10055 9065335a2674ba354c7fd4d9d0191dee 443 SMART SM00387 327 443 2.6E-30 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS10055 9065335a2674ba354c7fd4d9d0191dee 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 442 2.5E-18 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS16805 ca49af8d6bdfb68535e35f17256969df 188 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 39 181 7.4E-54 T 09-03-2017 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 NA29_RS16805 ca49af8d6bdfb68535e35f17256969df 188 Gene3D G3DSA:2.40.160.20 29 184 3.4E-52 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NA29_RS16805 ca49af8d6bdfb68535e35f17256969df 188 SUPERFAMILY SSF56925 30 184 5.1E-48 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NA29_RS16805 ca49af8d6bdfb68535e35f17256969df 188 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 36 172 1.0E-27 T 09-03-2017 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 NA29_RS05265 e7ef0b561488499b16dccceda7b7664e 543 SUPERFAMILY SSF53098 30 204 1.16E-51 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS05265 e7ef0b561488499b16dccceda7b7664e 543 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 36 190 5.0E-26 T 09-03-2017 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS05265 e7ef0b561488499b16dccceda7b7664e 543 SMART SM00479 33 197 1.2E-39 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III NA29_RS05265 e7ef0b561488499b16dccceda7b7664e 543 SMART SM00465 228 309 4.1E-9 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily NA29_RS05265 e7ef0b561488499b16dccceda7b7664e 543 Pfam PF00929 Exonuclease 35 182 1.2E-31 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III NA29_RS05265 e7ef0b561488499b16dccceda7b7664e 543 Gene3D G3DSA:3.30.420.10 31 193 6.5E-51 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS05265 e7ef0b561488499b16dccceda7b7664e 543 SUPERFAMILY SSF82771 228 308 7.59E-12 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily NA29_RS16170 870d16f6aba2f1fa4adef1c5e92b612c 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 163 2.3E-18 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS16170 870d16f6aba2f1fa4adef1c5e92b612c 172 Gene3D G3DSA:1.10.10.10 108 163 1.1E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16170 870d16f6aba2f1fa4adef1c5e92b612c 172 SUPERFAMILY SSF88946 11 99 1.41E-14 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS16170 870d16f6aba2f1fa4adef1c5e92b612c 172 SUPERFAMILY SSF88659 105 164 2.62E-13 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS16170 870d16f6aba2f1fa4adef1c5e92b612c 172 Pfam PF04542 Sigma-70 region 2 14 80 1.8E-11 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS16170 870d16f6aba2f1fa4adef1c5e92b612c 172 Gene3D G3DSA:1.10.1740.10 11 81 1.6E-11 T 09-03-2017 NA29_RS16170 870d16f6aba2f1fa4adef1c5e92b612c 172 Pfam PF08281 Sigma-70, region 4 111 163 2.1E-15 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS20220 e773d1882419058487b5822af58dfcfa 490 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 259 475 1.4E-46 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 NA29_RS20220 e773d1882419058487b5822af58dfcfa 490 Gene3D G3DSA:3.40.630.40 402 479 4.0E-57 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 NA29_RS20220 e773d1882419058487b5822af58dfcfa 490 Gene3D G3DSA:3.40.630.40 258 354 4.0E-57 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 NA29_RS20220 e773d1882419058487b5822af58dfcfa 490 SUPERFAMILY SSF53187 258 353 2.35E-52 T 09-03-2017 NA29_RS20220 e773d1882419058487b5822af58dfcfa 490 SUPERFAMILY SSF53187 401 478 2.35E-52 T 09-03-2017 NA29_RS20220 e773d1882419058487b5822af58dfcfa 490 Pfam PF11741 AMIN domain 48 151 1.4E-24 T 09-03-2017 IPR021731 AMIN domain NA29_RS20220 e773d1882419058487b5822af58dfcfa 490 SMART SM00646 319 475 7.7E-60 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 NA29_RS23115 98117fa8b98db87833175f5eee6d2cbb 3924 Pfam PF05860 haemagglutination activity domain 104 227 2.2E-25 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS23115 98117fa8b98db87833175f5eee6d2cbb 3924 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 126 225 1.3E-14 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS23115 98117fa8b98db87833175f5eee6d2cbb 3924 SUPERFAMILY SSF51126 96 411 8.79E-41 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS23115 98117fa8b98db87833175f5eee6d2cbb 3924 Gene3D G3DSA:2.160.20.10 95 425 1.8E-73 T 09-03-2017 IPR012334 Pectin lyase fold NA29_RS23115 98117fa8b98db87833175f5eee6d2cbb 3924 SMART SM00912 107 230 2.4E-30 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS18490 0544578875940bc02b5da5957d066a90 516 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 516 71.696 T 09-03-2017 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 NA29_RS18490 0544578875940bc02b5da5957d066a90 516 Gene3D G3DSA:3.40.1670.10 366 483 6.9E-54 T 09-03-2017 NA29_RS18490 0544578875940bc02b5da5957d066a90 516 SUPERFAMILY SSF143968 352 515 3.01E-64 T 09-03-2017 NA29_RS18490 0544578875940bc02b5da5957d066a90 516 Gene3D G3DSA:1.20.5.570 484 516 1.7E-12 T 09-03-2017 NA29_RS18490 0544578875940bc02b5da5957d066a90 516 SUPERFAMILY SSF50475 3 351 2.0E-112 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS18490 0544578875940bc02b5da5957d066a90 516 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 285 3.6E-78 T 09-03-2017 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 NA29_RS18490 0544578875940bc02b5da5957d066a90 516 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 307 484 5.3E-76 T 09-03-2017 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 NA29_RS18490 0544578875940bc02b5da5957d066a90 516 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 460 1.7E-164 T 09-03-2017 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 NA29_RS04225 ae07b59862d8daaa59358bbce9845fa8 310 SUPERFAMILY SSF52467 189 308 7.09E-46 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS04225 ae07b59862d8daaa59358bbce9845fa8 310 PIRSF PIRSF000089 1 310 1.3E-103 T 09-03-2017 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 NA29_RS04225 ae07b59862d8daaa59358bbce9845fa8 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 7.7E-34 T 09-03-2017 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 NA29_RS04225 ae07b59862d8daaa59358bbce9845fa8 310 Gene3D G3DSA:3.40.50.620 1 181 3.4E-63 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS04225 ae07b59862d8daaa59358bbce9845fa8 310 Pfam PF01012 Electron transfer flavoprotein domain 4 167 4.0E-38 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 NA29_RS04225 ae07b59862d8daaa59358bbce9845fa8 310 SUPERFAMILY SSF52402 2 185 3.35E-57 T 09-03-2017 NA29_RS04225 ae07b59862d8daaa59358bbce9845fa8 310 Gene3D G3DSA:3.40.50.1220 185 308 5.7E-59 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS04225 ae07b59862d8daaa59358bbce9845fa8 310 SMART SM00893 3 182 2.6E-56 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 NA29_RS13250 2b5b8e2e83623c9e465b0ca4a4b3a7ba 249 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 1.7E-100 T 09-03-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 NA29_RS13250 2b5b8e2e83623c9e465b0ca4a4b3a7ba 249 SUPERFAMILY SSF52313 5 232 1.96E-93 T 09-03-2017 IPR023591 Ribosomal protein S2, flavodoxin-like domain NA29_RS13250 2b5b8e2e83623c9e465b0ca4a4b3a7ba 249 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 5 16 - T 09-03-2017 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 NA29_RS13250 2b5b8e2e83623c9e465b0ca4a4b3a7ba 249 Pfam PF00318 Ribosomal protein S2 8 223 9.5E-94 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS13250 2b5b8e2e83623c9e465b0ca4a4b3a7ba 249 Gene3D G3DSA:1.10.287.610 99 151 7.1E-21 T 09-03-2017 NA29_RS13250 2b5b8e2e83623c9e465b0ca4a4b3a7ba 249 Gene3D G3DSA:3.40.50.10490 157 235 7.0E-65 T 09-03-2017 NA29_RS13250 2b5b8e2e83623c9e465b0ca4a4b3a7ba 249 Gene3D G3DSA:3.40.50.10490 22 98 7.0E-65 T 09-03-2017 NA29_RS13250 2b5b8e2e83623c9e465b0ca4a4b3a7ba 249 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 224 40.418 T 09-03-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 NA29_RS13250 2b5b8e2e83623c9e465b0ca4a4b3a7ba 249 PRINTS PR00395 Ribosomal protein S2 signature 36 45 1.6E-36 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS13250 2b5b8e2e83623c9e465b0ca4a4b3a7ba 249 PRINTS PR00395 Ribosomal protein S2 signature 157 174 1.6E-36 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS13250 2b5b8e2e83623c9e465b0ca4a4b3a7ba 249 PRINTS PR00395 Ribosomal protein S2 signature 86 103 1.6E-36 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS13250 2b5b8e2e83623c9e465b0ca4a4b3a7ba 249 PRINTS PR00395 Ribosomal protein S2 signature 174 185 1.6E-36 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS13250 2b5b8e2e83623c9e465b0ca4a4b3a7ba 249 PRINTS PR00395 Ribosomal protein S2 signature 5 23 1.6E-36 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS13250 2b5b8e2e83623c9e465b0ca4a4b3a7ba 249 PRINTS PR00395 Ribosomal protein S2 signature 195 209 1.6E-36 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS22675 fe951cc7ac978b0c88a9cc69ae10dac0 342 SUPERFAMILY SSF47648 3 71 7.06E-17 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS22675 fe951cc7ac978b0c88a9cc69ae10dac0 342 Gene3D G3DSA:1.20.970.10 5 71 2.4E-25 T 09-03-2017 NA29_RS22675 fe951cc7ac978b0c88a9cc69ae10dac0 342 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 335 1.8E-126 T 09-03-2017 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 NA29_RS22675 fe951cc7ac978b0c88a9cc69ae10dac0 342 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 6 336 37.569 T 09-03-2017 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 NA29_RS22675 fe951cc7ac978b0c88a9cc69ae10dac0 342 Pfam PF00591 Glycosyl transferase family, a/b domain 76 326 8.9E-95 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS22675 fe951cc7ac978b0c88a9cc69ae10dac0 342 SUPERFAMILY SSF52418 77 339 8.37E-100 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS22675 fe951cc7ac978b0c88a9cc69ae10dac0 342 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 3.0E-12 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS22675 fe951cc7ac978b0c88a9cc69ae10dac0 342 Gene3D G3DSA:3.40.1030.10 75 338 4.3E-109 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS18230 41f9b913bc38dd390fc3e006a2290aca 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 3.8E-28 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS18230 41f9b913bc38dd390fc3e006a2290aca 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.8E-28 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS18230 41f9b913bc38dd390fc3e006a2290aca 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 3.8E-28 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS18230 41f9b913bc38dd390fc3e006a2290aca 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 3.8E-28 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS18230 41f9b913bc38dd390fc3e006a2290aca 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 231 251 3.8E-28 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS18230 41f9b913bc38dd390fc3e006a2290aca 271 SUPERFAMILY SSF51735 9 267 1.62E-69 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18230 41f9b913bc38dd390fc3e006a2290aca 271 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 267 1.4E-49 T 09-03-2017 NA29_RS18230 41f9b913bc38dd390fc3e006a2290aca 271 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 171 0.0027 T 09-03-2017 NA29_RS18230 41f9b913bc38dd390fc3e006a2290aca 271 Gene3D G3DSA:3.40.50.720 5 267 1.8E-74 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS23465 727ab6925872fab24c213e34f2dcee9b 249 Gene3D G3DSA:3.20.20.70 1 238 1.6E-90 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS23465 727ab6925872fab24c213e34f2dcee9b 249 Pfam PF00977 Histidine biosynthesis protein 3 232 4.2E-81 T 09-03-2017 IPR006062 Histidine biosynthesis GO:0000105 NA29_RS23465 727ab6925872fab24c213e34f2dcee9b 249 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 1.4E-78 T 09-03-2017 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 NA29_RS23465 727ab6925872fab24c213e34f2dcee9b 249 SUPERFAMILY SSF51366 1 237 5.1E-77 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NA29_RS23465 727ab6925872fab24c213e34f2dcee9b 249 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 36.435 T 09-03-2017 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 NA29_RS08770 6d13038ee51f21458945cfc50cbe5ea9 341 Hamap MF_01242 Aliphatic amidase [amiE]. 1 340 80.251 T 09-03-2017 IPR023719 Aliphatic amidase GO:0004040 KEGG: 00330+3.5.1.4|KEGG: 00360+3.5.1.4|KEGG: 00380+3.5.1.4|KEGG: 00627+3.5.1.4|KEGG: 00643+3.5.1.4|MetaCyc: PWY-3161|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 NA29_RS08770 6d13038ee51f21458945cfc50cbe5ea9 341 SUPERFAMILY SSF56317 15 275 1.7E-56 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NA29_RS08770 6d13038ee51f21458945cfc50cbe5ea9 341 Pfam PF00795 Carbon-nitrogen hydrolase 15 268 3.1E-49 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NA29_RS08770 6d13038ee51f21458945cfc50cbe5ea9 341 Gene3D G3DSA:3.60.110.10 15 279 2.1E-54 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NA29_RS25085 6cedc66eeb473453be81d54c284b1317 176 Gene3D G3DSA:1.10.520.20 2 104 3.7E-27 T 09-03-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 NA29_RS25085 6cedc66eeb473453be81d54c284b1317 176 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.2E-22 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 NA29_RS25085 6cedc66eeb473453be81d54c284b1317 176 PRINTS PR00125 ATP synthase delta subunit signature 73 84 1.2E-22 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 NA29_RS25085 6cedc66eeb473453be81d54c284b1317 176 PRINTS PR00125 ATP synthase delta subunit signature 84 98 1.2E-22 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 NA29_RS25085 6cedc66eeb473453be81d54c284b1317 176 PRINTS PR00125 ATP synthase delta subunit signature 149 167 1.2E-22 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 NA29_RS25085 6cedc66eeb473453be81d54c284b1317 176 PRINTS PR00125 ATP synthase delta subunit signature 134 149 1.2E-22 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 NA29_RS25085 6cedc66eeb473453be81d54c284b1317 176 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 173 1.3E-34 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 NA29_RS25085 6cedc66eeb473453be81d54c284b1317 176 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 176 18.673 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 NA29_RS25085 6cedc66eeb473453be81d54c284b1317 176 SUPERFAMILY SSF47928 3 103 7.19E-22 T 09-03-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 NA29_RS25085 6cedc66eeb473453be81d54c284b1317 176 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 4.0E-47 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 NA29_RS08220 08202e27b43a1c938ee844c964c3f19f 500 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 450 5.8E-59 T 09-03-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 NA29_RS08220 08202e27b43a1c938ee844c964c3f19f 500 Gene3D G3DSA:3.30.420.40 4 253 3.7E-110 T 09-03-2017 NA29_RS08220 08202e27b43a1c938ee844c964c3f19f 500 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 252 2.0E-86 T 09-03-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 NA29_RS08220 08202e27b43a1c938ee844c964c3f19f 500 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 09-03-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 NA29_RS08220 08202e27b43a1c938ee844c964c3f19f 500 SUPERFAMILY SSF53067 254 494 1.17E-80 T 09-03-2017 NA29_RS08220 08202e27b43a1c938ee844c964c3f19f 500 SUPERFAMILY SSF53067 6 255 4.64E-100 T 09-03-2017 NA29_RS08220 08202e27b43a1c938ee844c964c3f19f 500 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 6 496 5.1E-223 T 09-03-2017 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 NA29_RS08220 08202e27b43a1c938ee844c964c3f19f 500 PIRSF PIRSF000538 4 500 3.4E-182 T 09-03-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 NA29_RS08220 08202e27b43a1c938ee844c964c3f19f 500 Gene3D G3DSA:3.30.420.40 254 498 1.9E-97 T 09-03-2017 NA29_RS08220 08202e27b43a1c938ee844c964c3f19f 500 Hamap MF_00186 Glycerol kinase [glpK]. 4 497 57.853 T 09-03-2017 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 NA29_RS02140 383d2d8e048adda07ddad41df745f61a 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 101 8.4E-13 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS02140 383d2d8e048adda07ddad41df745f61a 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 8.4E-13 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS02140 383d2d8e048adda07ddad41df745f61a 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 203 217 8.4E-13 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS02140 383d2d8e048adda07ddad41df745f61a 264 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 8.4E-13 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS02140 383d2d8e048adda07ddad41df745f61a 264 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 10 257 9.3E-78 T 09-03-2017 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 NA29_RS02140 383d2d8e048adda07ddad41df745f61a 264 Pfam PF00561 alpha/beta hydrolase fold 19 244 1.4E-23 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS02140 383d2d8e048adda07ddad41df745f61a 264 Gene3D G3DSA:3.40.50.1820 3 257 1.0E-67 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS02140 383d2d8e048adda07ddad41df745f61a 264 SUPERFAMILY SSF53474 4 257 1.34E-64 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS01510 0f3e4ed3a91a007e10e901dbdb47c8f1 214 Gene3D G3DSA:1.20.1050.10 97 204 2.1E-43 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS01510 0f3e4ed3a91a007e10e901dbdb47c8f1 214 SUPERFAMILY SSF52833 4 85 4.01E-22 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS01510 0f3e4ed3a91a007e10e901dbdb47c8f1 214 Gene3D G3DSA:3.40.30.10 8 96 1.1E-21 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS01510 0f3e4ed3a91a007e10e901dbdb47c8f1 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 78 7.8E-16 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS01510 0f3e4ed3a91a007e10e901dbdb47c8f1 214 SUPERFAMILY SSF47616 81 199 2.13E-20 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS03490 10425b4ef6422e52337f37af9b53845a 386 Pfam PF01494 FAD binding domain 148 331 2.6E-12 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 NA29_RS03490 10425b4ef6422e52337f37af9b53845a 386 Pfam PF01494 FAD binding domain 7 50 5.3E-7 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 NA29_RS03490 10425b4ef6422e52337f37af9b53845a 386 SUPERFAMILY SSF51905 3 171 6.25E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03490 10425b4ef6422e52337f37af9b53845a 386 SUPERFAMILY SSF51905 290 365 6.25E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03490 10425b4ef6422e52337f37af9b53845a 386 Gene3D G3DSA:3.50.50.60 281 342 4.9E-34 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03490 10425b4ef6422e52337f37af9b53845a 386 Gene3D G3DSA:3.50.50.60 7 177 4.9E-34 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03490 10425b4ef6422e52337f37af9b53845a 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 5.6E-17 T 09-03-2017 NA29_RS03490 10425b4ef6422e52337f37af9b53845a 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 310 5.6E-17 T 09-03-2017 NA29_RS03490 10425b4ef6422e52337f37af9b53845a 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 5.6E-17 T 09-03-2017 NA29_RS22060 22f292e2f45252052cca06e9d4803fbf 422 SUPERFAMILY SSF53720 6 421 3.93E-113 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS22060 22f292e2f45252052cca06e9d4803fbf 422 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 328 349 - T 09-03-2017 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 NA29_RS22060 22f292e2f45252052cca06e9d4803fbf 422 Pfam PF00171 Aldehyde dehydrogenase family 12 272 1.3E-14 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS22060 22f292e2f45252052cca06e9d4803fbf 422 Pfam PF00171 Aldehyde dehydrogenase family 313 384 1.0E-5 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS22060 22f292e2f45252052cca06e9d4803fbf 422 Gene3D G3DSA:3.40.309.10 227 379 5.4E-35 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS22060 22f292e2f45252052cca06e9d4803fbf 422 PIRSF PIRSF000151 1 422 6.5E-169 T 09-03-2017 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 NA29_RS22060 22f292e2f45252052cca06e9d4803fbf 422 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 14 411 4.7E-145 T 09-03-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 NA29_RS22060 22f292e2f45252052cca06e9d4803fbf 422 Gene3D G3DSA:3.40.605.10 380 421 2.4E-98 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS22060 22f292e2f45252052cca06e9d4803fbf 422 Gene3D G3DSA:3.40.605.10 3 225 2.4E-98 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS22060 22f292e2f45252052cca06e9d4803fbf 422 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 6 421 40.59 T 09-03-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 NA29_RS02225 41c32ec5ccb640a1cb79d02b40368743 338 SUPERFAMILY SSF55681 49 271 1.09E-43 T 09-03-2017 NA29_RS02225 41c32ec5ccb640a1cb79d02b40368743 338 Gene3D G3DSA:2.30.30.100 276 323 1.7E-12 T 09-03-2017 NA29_RS02225 41c32ec5ccb640a1cb79d02b40368743 338 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 58 320 8.4E-39 T 09-03-2017 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 Reactome: R-HSA-196780|Reactome: R-HSA-3371599 NA29_RS02225 41c32ec5ccb640a1cb79d02b40368743 338 SUPERFAMILY SSF50037 282 321 1.56E-6 T 09-03-2017 IPR008988 Transcriptional repressor, C-terminal NA29_RS02225 41c32ec5ccb640a1cb79d02b40368743 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 72 190 1.8E-11 T 09-03-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 NA29_RS02225 41c32ec5ccb640a1cb79d02b40368743 338 Pfam PF02237 Biotin protein ligase C terminal domain 276 321 3.4E-6 T 09-03-2017 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 NA29_RS02225 41c32ec5ccb640a1cb79d02b40368743 338 Gene3D G3DSA:3.30.930.10 54 272 1.1E-49 T 09-03-2017 NA29_RS12820 a1fdc43451c2d0400ccf16309e1f28a9 274 Gene3D G3DSA:3.60.21.10 4 222 5.7E-36 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS12820 a1fdc43451c2d0400ccf16309e1f28a9 274 Pfam PF00149 Calcineurin-like phosphoesterase 4 199 4.6E-15 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NA29_RS12820 a1fdc43451c2d0400ccf16309e1f28a9 274 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 260 35.399 T 09-03-2017 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 NA29_RS12820 a1fdc43451c2d0400ccf16309e1f28a9 274 SUPERFAMILY SSF56300 1 264 1.52E-49 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS09460 af25f49cec5467b0d3b5a734534aa22c 158 SUPERFAMILY SSF82784 5 150 3.14E-44 T 09-03-2017 IPR003718 OsmC/Ohr family NA29_RS09460 af25f49cec5467b0d3b5a734534aa22c 158 Pfam PF02566 OsmC-like protein 53 150 1.1E-12 T 09-03-2017 IPR003718 OsmC/Ohr family NA29_RS09460 af25f49cec5467b0d3b5a734534aa22c 158 Gene3D G3DSA:3.30.300.20 3 152 2.5E-62 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta NA29_RS04805 9c4d3b18021c4cce365d55ba952aa83a 408 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 177 205 - T 09-03-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 NA29_RS04805 9c4d3b18021c4cce365d55ba952aa83a 408 Gene3D G3DSA:1.10.530.10 155 287 7.6E-45 T 09-03-2017 NA29_RS04805 9c4d3b18021c4cce365d55ba952aa83a 408 Pfam PF01464 Transglycosylase SLT domain 160 259 2.9E-28 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 NA29_RS04805 9c4d3b18021c4cce365d55ba952aa83a 408 SUPERFAMILY SSF53955 142 282 6.19E-44 T 09-03-2017 IPR023346 Lysozyme-like domain NA29_RS17105 7bbeeefcf63467fa82ba7c6440020733 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 3.7E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS17105 7bbeeefcf63467fa82ba7c6440020733 308 SUPERFAMILY SSF53850 90 299 5.79E-38 T 09-03-2017 NA29_RS17105 7bbeeefcf63467fa82ba7c6440020733 308 Gene3D G3DSA:3.40.190.10 175 265 4.1E-25 T 09-03-2017 NA29_RS17105 7bbeeefcf63467fa82ba7c6440020733 308 Gene3D G3DSA:3.40.190.10 88 174 2.4E-18 T 09-03-2017 NA29_RS17105 7bbeeefcf63467fa82ba7c6440020733 308 Gene3D G3DSA:1.10.10.10 4 86 7.7E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17105 7bbeeefcf63467fa82ba7c6440020733 308 SUPERFAMILY SSF46785 3 110 2.39E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17105 7bbeeefcf63467fa82ba7c6440020733 308 Pfam PF03466 LysR substrate binding domain 91 294 1.1E-38 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS24855 d79c75a2f40d6dcdb26f0ccf54bfeca3 149 Pfam PF04347 Flagellar biosynthesis protein, FliO 51 146 5.6E-20 T 09-03-2017 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 NA29_RS24855 d79c75a2f40d6dcdb26f0ccf54bfeca3 149 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 39 105 6.4E-22 T 09-03-2017 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 NA29_RS07690 704e0de7d4333422a846538d51a117fd 520 Pfam PF07690 Major Facilitator Superfamily 21 420 2.0E-28 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS07690 704e0de7d4333422a846538d51a117fd 520 SUPERFAMILY SSF103473 257 430 3.4E-44 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS07690 704e0de7d4333422a846538d51a117fd 520 SUPERFAMILY SSF103473 17 205 3.4E-44 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS07690 704e0de7d4333422a846538d51a117fd 520 SUPERFAMILY SSF103473 490 516 3.4E-44 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS07690 704e0de7d4333422a846538d51a117fd 520 Gene3D G3DSA:1.20.1250.20 19 192 4.3E-15 T 09-03-2017 NA29_RS07690 704e0de7d4333422a846538d51a117fd 520 Gene3D G3DSA:1.20.1250.20 491 516 6.5E-12 T 09-03-2017 NA29_RS07690 704e0de7d4333422a846538d51a117fd 520 Gene3D G3DSA:1.20.1250.20 266 431 6.5E-12 T 09-03-2017 NA29_RS05340 01e16d9a0c35a2c7e8e857846977431c 124 PIRSF PIRSF039020 1 122 1.6E-45 T 09-03-2017 IPR026275 Glyoxalase/bleomycin resistance protein/dioxygenase NA29_RS05340 01e16d9a0c35a2c7e8e857846977431c 124 SUPERFAMILY SSF54593 3 118 8.59E-24 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS05340 01e16d9a0c35a2c7e8e857846977431c 124 Gene3D G3DSA:3.10.180.10 3 119 1.3E-26 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS05340 01e16d9a0c35a2c7e8e857846977431c 124 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 115 6.6E-10 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NA29_RS15720 9e186b811cf161f65c6ee2e2507818f8 213 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 40 210 6.4E-39 T 09-03-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 NA29_RS15720 9e186b811cf161f65c6ee2e2507818f8 213 Pfam PF05239 PRC-barrel domain 131 208 2.4E-6 T 09-03-2017 IPR027275 PRC-barrel domain NA29_RS15720 9e186b811cf161f65c6ee2e2507818f8 213 Gene3D G3DSA:2.40.30.60 33 127 1.3E-29 T 09-03-2017 IPR002676 RimM protein GO:0006364 NA29_RS15720 9e186b811cf161f65c6ee2e2507818f8 213 Pfam PF01782 RimM N-terminal domain 41 125 5.4E-20 T 09-03-2017 IPR002676 RimM protein GO:0006364 NA29_RS15720 9e186b811cf161f65c6ee2e2507818f8 213 SUPERFAMILY SSF50346 134 210 2.09E-16 T 09-03-2017 IPR011033 PRC-barrel-like NA29_RS15720 9e186b811cf161f65c6ee2e2507818f8 213 SUPERFAMILY SSF50447 38 127 1.31E-18 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain NA29_RS15720 9e186b811cf161f65c6ee2e2507818f8 213 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 39 213 21.816 T 09-03-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 NA29_RS15720 9e186b811cf161f65c6ee2e2507818f8 213 Gene3D G3DSA:2.30.30.240 134 213 7.3E-22 T 09-03-2017 NA29_RS14330 17097e66e399dfc678b97666a177d784 215 SMART SM00421 154 211 4.4E-20 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS14330 17097e66e399dfc678b97666a177d784 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 4.4E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS14330 17097e66e399dfc678b97666a177d784 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 4.4E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS14330 17097e66e399dfc678b97666a177d784 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 4.4E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS14330 17097e66e399dfc678b97666a177d784 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 211 3.9E-20 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS14330 17097e66e399dfc678b97666a177d784 215 Gene3D G3DSA:3.40.50.2300 12 162 2.1E-34 T 09-03-2017 NA29_RS14330 17097e66e399dfc678b97666a177d784 215 SUPERFAMILY SSF52172 11 168 4.27E-34 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS14330 17097e66e399dfc678b97666a177d784 215 SMART SM00448 11 130 1.7E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS14330 17097e66e399dfc678b97666a177d784 215 Gene3D G3DSA:1.10.10.10 163 213 4.5E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14330 17097e66e399dfc678b97666a177d784 215 Pfam PF00072 Response regulator receiver domain 13 130 7.7E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS14330 17097e66e399dfc678b97666a177d784 215 SUPERFAMILY SSF46894 152 212 7.65E-18 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS14330 17097e66e399dfc678b97666a177d784 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS22725 0659abefce15a603c6ff31ce14786a8b 604 Gene3D G3DSA:2.30.42.10 484 581 2.1E-14 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS22725 0659abefce15a603c6ff31ce14786a8b 604 PIRSF PIRSF016493 5 603 4.9E-219 T 09-03-2017 IPR024191 Peptidase M61 NA29_RS22725 0659abefce15a603c6ff31ce14786a8b 604 Pfam PF13180 PDZ domain 498 576 1.3E-12 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS22725 0659abefce15a603c6ff31ce14786a8b 604 SUPERFAMILY SSF55486 237 467 2.27E-10 T 09-03-2017 NA29_RS22725 0659abefce15a603c6ff31ce14786a8b 604 Pfam PF05299 M61 glycyl aminopeptidase 287 403 4.5E-47 T 09-03-2017 IPR007963 Peptidase M61, catalytic domain NA29_RS22725 0659abefce15a603c6ff31ce14786a8b 604 SMART SM00228 482 567 7.6E-6 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS22725 0659abefce15a603c6ff31ce14786a8b 604 SUPERFAMILY SSF50156 502 584 4.6E-12 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 29 702 5.9E-247 T 09-03-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 Pfam PF14520 Helix-hairpin-helix domain 482 536 6.1E-5 T 09-03-2017 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 357 433 1.9E-35 T 09-03-2017 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 Gene3D G3DSA:1.10.287.610 19 85 3.0E-28 T 09-03-2017 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 Gene3D G3DSA:2.40.50.140 354 425 1.4E-34 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 Gene3D G3DSA:1.10.150.20 539 624 8.8E-32 T 09-03-2017 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 SUPERFAMILY SSF52113 634 707 1.29E-18 T 09-03-2017 IPR001357 BRCT domain NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 Gene3D G3DSA:1.10.150.20 470 537 6.7E-26 T 09-03-2017 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 366 381 - T 09-03-2017 IPR033136 NAD-dependent DNA ligase, conserved site NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 SUPERFAMILY SSF50249 353 435 8.74E-29 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 150 179 - T 09-03-2017 IPR018239 NAD-dependent DNA ligase, active site NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 SMART SM00292 633 710 3.2E-14 T 09-03-2017 IPR001357 BRCT domain NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 442 469 2.0E-10 T 09-03-2017 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 SMART SM00532 21 483 2.5E-257 T 09-03-2017 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 Hamap MF_01588 DNA ligase [ligA]. 20 707 53.66 T 09-03-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 SUPERFAMILY SSF56091 19 351 4.93E-112 T 09-03-2017 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 Gene3D G3DSA:3.40.50.10190 634 708 3.3E-25 T 09-03-2017 IPR001357 BRCT domain NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 22 353 2.2E-116 T 09-03-2017 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 Pfam PF12826 Helix-hairpin-helix motif 545 613 1.3E-21 T 09-03-2017 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 PIRSF PIRSF001604 14 710 1.7E-238 T 09-03-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 SMART SM00278 547 566 170.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 SMART SM00278 515 534 540.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 SMART SM00278 584 603 78.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 SMART SM00278 481 500 160.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 Gene3D G3DSA:3.30.470.30 154 287 8.4E-52 T 09-03-2017 NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 633 705 6.9E-13 T 09-03-2017 IPR001357 BRCT domain NA29_RS13280 59ffeb3151b30463740adab1d5651652 710 SUPERFAMILY SSF47781 438 623 3.15E-59 T 09-03-2017 IPR010994 RuvA domain 2-like NA29_RS12660 8faca1a1e6cb9103904f714f3a029516 583 Gene3D G3DSA:1.10.3720.10 20 282 6.2E-36 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS12660 8faca1a1e6cb9103904f714f3a029516 583 SUPERFAMILY SSF161098 18 284 9.81E-43 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS12660 8faca1a1e6cb9103904f714f3a029516 583 Gene3D G3DSA:1.10.3720.10 334 581 1.5E-41 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS12660 8faca1a1e6cb9103904f714f3a029516 583 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 405 580 4.4E-13 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS12660 8faca1a1e6cb9103904f714f3a029516 583 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 285 1.0E-8 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS12660 8faca1a1e6cb9103904f714f3a029516 583 SUPERFAMILY SSF161098 332 581 1.03E-45 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS11445 80bad66126ace4ea0eaf718acf1b57d1 510 Pfam PF00221 Aromatic amino acid lyase 11 471 2.4E-186 T 09-03-2017 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 NA29_RS11445 80bad66126ace4ea0eaf718acf1b57d1 510 SUPERFAMILY SSF48557 5 503 1.65E-192 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 NA29_RS11445 80bad66126ace4ea0eaf718acf1b57d1 510 Gene3D G3DSA:1.10.275.10 5 197 1.1E-75 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal NA29_RS11445 80bad66126ace4ea0eaf718acf1b57d1 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 09-03-2017 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 NA29_RS11445 80bad66126ace4ea0eaf718acf1b57d1 510 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.8 T 09-03-2017 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 NA29_RS11445 80bad66126ace4ea0eaf718acf1b57d1 510 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 6 507 3.2E-222 T 09-03-2017 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 NA29_RS11445 80bad66126ace4ea0eaf718acf1b57d1 510 Gene3D G3DSA:1.20.200.10 198 503 3.4E-128 T 09-03-2017 NA29_RS11480 b4d1f2b52d223e752ac78c0bc0e48621 345 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS11480 b4d1f2b52d223e752ac78c0bc0e48621 345 Pfam PF00005 ABC transporter 19 161 2.7E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS11480 b4d1f2b52d223e752ac78c0bc0e48621 345 Gene3D G3DSA:3.40.50.300 2 228 1.4E-76 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11480 b4d1f2b52d223e752ac78c0bc0e48621 345 SMART SM00382 28 211 6.2E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS11480 b4d1f2b52d223e752ac78c0bc0e48621 345 SUPERFAMILY SSF52540 3 242 2.97E-79 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19110 06f70bb9fd70684598cd3be8da91b42d 173 Gene3D G3DSA:3.90.1340.10 1 66 3.2E-26 T 09-03-2017 IPR011083 Phage tail collar domain NA29_RS19110 06f70bb9fd70684598cd3be8da91b42d 173 Pfam PF07484 Phage Tail Collar Domain 7 63 7.0E-24 T 09-03-2017 IPR011083 Phage tail collar domain NA29_RS19110 06f70bb9fd70684598cd3be8da91b42d 173 SUPERFAMILY SSF88874 1 164 1.96E-36 T 09-03-2017 NA29_RS16625 425b0b947438571af555fda3e950972e 628 SUPERFAMILY SSF52540 17 273 1.66E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS16625 425b0b947438571af555fda3e950972e 628 SUPERFAMILY SSF52540 322 571 4.05E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS16625 425b0b947438571af555fda3e950972e 628 Gene3D G3DSA:3.40.50.300 17 275 1.2E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS16625 425b0b947438571af555fda3e950972e 628 Gene3D G3DSA:3.40.50.300 320 573 5.0E-80 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS16625 425b0b947438571af555fda3e950972e 628 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 549 599 1.4E-10 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS16625 425b0b947438571af555fda3e950972e 628 SMART SM00382 46 251 1.1E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS16625 425b0b947438571af555fda3e950972e 628 SMART SM00382 357 557 1.2E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS16625 425b0b947438571af555fda3e950972e 628 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS16625 425b0b947438571af555fda3e950972e 628 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 253 284 1.9E-5 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS16625 425b0b947438571af555fda3e950972e 628 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 551 588 3.8E-9 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS16625 425b0b947438571af555fda3e950972e 628 Pfam PF00005 ABC transporter 38 201 4.0E-23 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS16625 425b0b947438571af555fda3e950972e 628 Pfam PF00005 ABC transporter 349 498 1.4E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS16625 425b0b947438571af555fda3e950972e 628 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS18745 252dd3fa7011611b28e9fc674cc66a04 264 SMART SM00346 5 94 1.3E-16 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS18745 252dd3fa7011611b28e9fc674cc66a04 264 Gene3D G3DSA:1.10.10.10 4 74 2.9E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18745 252dd3fa7011611b28e9fc674cc66a04 264 SUPERFAMILY SSF46785 5 77 3.37E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18745 252dd3fa7011611b28e9fc674cc66a04 264 Pfam PF09339 IclR helix-turn-helix domain 7 56 9.5E-12 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS18745 252dd3fa7011611b28e9fc674cc66a04 264 Pfam PF01614 Bacterial transcriptional regulator 122 242 5.2E-25 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS18745 252dd3fa7011611b28e9fc674cc66a04 264 SUPERFAMILY SSF55781 69 247 4.05E-41 T 09-03-2017 IPR029016 GAF domain-like NA29_RS18745 252dd3fa7011611b28e9fc674cc66a04 264 Gene3D G3DSA:3.30.450.40 75 247 5.3E-46 T 09-03-2017 IPR029016 GAF domain-like NA29_RS09245 bf34ceab1d3ac69cacfaf9c85330d0cf 409 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 271 1.8E-69 T 09-03-2017 IPR017039 Virulence factor BrkB NA29_RS09245 bf34ceab1d3ac69cacfaf9c85330d0cf 409 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 1 302 22.902 T 09-03-2017 IPR023679 Uncharacterised protein family UPF0761, bacterial NA29_RS09245 bf34ceab1d3ac69cacfaf9c85330d0cf 409 Pfam PF03631 Virulence factor BrkB 24 271 1.2E-59 T 09-03-2017 IPR017039 Virulence factor BrkB NA29_RS05430 dc88b5c0135ac0425aa68f188185c951 314 SUPERFAMILY SSF51735 98 280 5.52E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS05430 dc88b5c0135ac0425aa68f188185c951 314 Gene3D G3DSA:3.40.50.720 99 280 8.6E-55 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS05430 dc88b5c0135ac0425aa68f188185c951 314 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 279 2.4E-46 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 Gene3D G3DSA:3.40.50.1000 463 578 1.6E-35 T 09-03-2017 IPR023214 HAD-like domain NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 Gene3D G3DSA:3.40.50.1000 301 327 1.6E-35 T 09-03-2017 IPR023214 HAD-like domain NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 477 487 1.3E-23 T 09-03-2017 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 530 549 1.3E-23 T 09-03-2017 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 315 329 1.3E-23 T 09-03-2017 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 565 1.3E-23 T 09-03-2017 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 158 172 1.3E-23 T 09-03-2017 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 Pfam PF00702 haloacid dehalogenase-like hydrolase 311 544 8.0E-33 T 09-03-2017 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 SUPERFAMILY SSF56784 313 333 1.34E-37 T 09-03-2017 IPR023214 HAD-like domain NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 SUPERFAMILY SSF56784 404 581 1.34E-37 T 09-03-2017 IPR023214 HAD-like domain NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 Pfam PF00122 E1-E2 ATPase 76 306 1.4E-38 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 Gene3D G3DSA:3.40.1110.10 328 462 8.9E-50 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 317 323 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 12 694 41.076 T 09-03-2017 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 SUPERFAMILY SSF81653 116 211 1.01E-21 T 09-03-2017 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 SUPERFAMILY SSF81665 212 309 4.97E-13 T 09-03-2017 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 SUPERFAMILY SSF81665 31 107 4.97E-13 T 09-03-2017 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 SUPERFAMILY SSF81665 633 677 4.97E-13 T 09-03-2017 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 76 347 1.5E-34 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 384 613 3.0E-43 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 10 690 0.0 T 09-03-2017 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 NA29_RS08965 570989f20f692ae90705d1f4e923f8c0 696 Gene3D G3DSA:2.70.150.10 70 212 3.1E-25 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 NA29_RS08115 17a7c8436e8cdb0e9c6f6b7fb3a3f44f 580 SUPERFAMILY SSF52016 380 558 7.85E-52 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS08115 17a7c8436e8cdb0e9c6f6b7fb3a3f44f 580 SUPERFAMILY SSF143975 6 378 8.11E-117 T 09-03-2017 NA29_RS08115 17a7c8436e8cdb0e9c6f6b7fb3a3f44f 580 Pfam PF00920 Dehydratase family 37 555 6.5E-185 T 09-03-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS08115 17a7c8436e8cdb0e9c6f6b7fb3a3f44f 580 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 7 558 42.091 T 09-03-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS08115 17a7c8436e8cdb0e9c6f6b7fb3a3f44f 580 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 466 477 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS08115 17a7c8436e8cdb0e9c6f6b7fb3a3f44f 580 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 125 135 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS04055 43982895abb764d07f7de2c905c94503 469 SUPERFAMILY SSF55874 321 468 2.75E-34 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS04055 43982895abb764d07f7de2c905c94503 469 Pfam PF00512 His Kinase A (phospho-acceptor) domain 251 315 6.7E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS04055 43982895abb764d07f7de2c905c94503 469 Pfam PF00672 HAMP domain 181 246 5.3E-13 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS04055 43982895abb764d07f7de2c905c94503 469 SMART SM00387 359 469 2.5E-28 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS04055 43982895abb764d07f7de2c905c94503 469 Gene3D G3DSA:3.30.565.10 304 468 3.7E-34 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS04055 43982895abb764d07f7de2c905c94503 469 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 10 467 9.6E-144 T 09-03-2017 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 NA29_RS04055 43982895abb764d07f7de2c905c94503 469 Gene3D G3DSA:1.10.287.130 241 303 2.7E-8 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS04055 43982895abb764d07f7de2c905c94503 469 SUPERFAMILY SSF158472 197 246 1.44E-5 T 09-03-2017 NA29_RS04055 43982895abb764d07f7de2c905c94503 469 SMART SM00388 250 316 8.3E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS04055 43982895abb764d07f7de2c905c94503 469 SUPERFAMILY SSF47384 233 315 3.14E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS04055 43982895abb764d07f7de2c905c94503 469 SMART SM00304 196 249 1.4E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS04055 43982895abb764d07f7de2c905c94503 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 467 8.3E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS04055 43982895abb764d07f7de2c905c94503 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 8.3E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS04055 43982895abb764d07f7de2c905c94503 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 42 56 8.3E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS04055 43982895abb764d07f7de2c905c94503 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 424 8.3E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS04055 43982895abb764d07f7de2c905c94503 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 467 1.1E-16 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS17150 206f28d8952b502e4da0fd11199cc9c4 134 Pfam PF01638 HxlR-like helix-turn-helix 34 120 8.2E-23 T 09-03-2017 IPR002577 Helix-turn-helix, HxlR type NA29_RS17150 206f28d8952b502e4da0fd11199cc9c4 134 Gene3D G3DSA:1.10.10.10 27 132 6.0E-36 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17150 206f28d8952b502e4da0fd11199cc9c4 134 SUPERFAMILY SSF46785 28 131 6.64E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08685 97c537084a93b86671d930d9d5aa5b96 227 SUPERFAMILY SSF48498 84 196 3.5E-22 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS08685 97c537084a93b86671d930d9d5aa5b96 227 Gene3D G3DSA:1.10.10.60 9 56 3.7E-21 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08685 97c537084a93b86671d930d9d5aa5b96 227 SUPERFAMILY SSF46689 7 79 2.84E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08685 97c537084a93b86671d930d9d5aa5b96 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 3.9E-12 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS08685 97c537084a93b86671d930d9d5aa5b96 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 3.9E-12 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS08685 97c537084a93b86671d930d9d5aa5b96 227 Gene3D G3DSA:1.10.357.10 57 197 3.8E-32 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS08685 97c537084a93b86671d930d9d5aa5b96 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 3.0E-18 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS24570 cb026a627a317b98c9c2a8c6631c1c54 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 2 116 1.0E-39 T 09-03-2017 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 NA29_RS24570 cb026a627a317b98c9c2a8c6631c1c54 116 SUPERFAMILY SSF52833 1 116 7.16E-31 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS24570 cb026a627a317b98c9c2a8c6631c1c54 116 Pfam PF03960 ArsC family 5 112 8.7E-16 T 09-03-2017 IPR006660 Arsenate reductase-like NA29_RS24570 cb026a627a317b98c9c2a8c6631c1c54 116 Gene3D G3DSA:3.40.30.10 1 116 9.2E-45 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS12510 be15811a7af56d80bf85ef5b3a3a750f 499 SUPERFAMILY SSF55073 329 489 1.91E-47 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS12510 be15811a7af56d80bf85ef5b3a3a750f 499 Gene3D G3DSA:3.30.70.270 325 490 1.4E-53 T 09-03-2017 NA29_RS12510 be15811a7af56d80bf85ef5b3a3a750f 499 Gene3D G3DSA:3.30.450.20 172 282 1.9E-8 T 09-03-2017 NA29_RS12510 be15811a7af56d80bf85ef5b3a3a750f 499 Pfam PF00990 Diguanylate cyclase, GGDEF domain 324 484 2.9E-47 T 09-03-2017 IPR000160 GGDEF domain NA29_RS12510 be15811a7af56d80bf85ef5b3a3a750f 499 SMART SM00267 313 488 1.1E-62 T 09-03-2017 IPR000160 GGDEF domain NA29_RS12510 be15811a7af56d80bf85ef5b3a3a750f 499 Gene3D G3DSA:3.30.450.20 88 171 2.0E-10 T 09-03-2017 NA29_RS12510 be15811a7af56d80bf85ef5b3a3a750f 499 Pfam PF02743 Cache domain 42 218 2.8E-14 T 09-03-2017 IPR033479 Double Cache domain 1 NA29_RS12510 be15811a7af56d80bf85ef5b3a3a750f 499 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 322 488 8.4E-52 T 09-03-2017 IPR000160 GGDEF domain NA29_RS01795 6539812f3e9d161401ae13742671bb05 123 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 2 110 5.5E-25 T 09-03-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 NA29_RS01795 6539812f3e9d161401ae13742671bb05 123 Gene3D G3DSA:3.30.479.10 1 108 5.9E-25 T 09-03-2017 NA29_RS01795 6539812f3e9d161401ae13742671bb05 123 PIRSF PIRSF006113 1 120 1.8E-23 T 09-03-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 NA29_RS01795 6539812f3e9d161401ae13742671bb05 123 SUPERFAMILY SSF55620 2 108 3.0E-24 T 09-03-2017 NA29_RS05520 5e3fbf2a1031e56cfab8331af4f987b8 159 Pfam PF01967 MoaC family 15 150 9.7E-55 T 09-03-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 NA29_RS05520 5e3fbf2a1031e56cfab8331af4f987b8 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.667 T 09-03-2017 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type Reactome: R-HSA-947581 NA29_RS05520 5e3fbf2a1031e56cfab8331af4f987b8 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 4.0E-62 T 09-03-2017 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 NA29_RS05520 5e3fbf2a1031e56cfab8331af4f987b8 159 SUPERFAMILY SSF55040 11 155 3.66E-61 T 09-03-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 NA29_RS05520 5e3fbf2a1031e56cfab8331af4f987b8 159 Gene3D G3DSA:3.30.70.640 3 157 8.8E-69 T 09-03-2017 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 NA29_RS22660 9e45aad9b1849b3fb43b2c456910e239 645 Pfam PF11412 Disulphide bond corrector protein DsbC 37 145 2.4E-20 T 09-03-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain NA29_RS22660 9e45aad9b1849b3fb43b2c456910e239 645 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 2 640 32.117 T 09-03-2017 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 NA29_RS22660 9e45aad9b1849b3fb43b2c456910e239 645 Gene3D G3DSA:3.40.30.10 530 640 8.0E-30 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS22660 9e45aad9b1849b3fb43b2c456910e239 645 Pfam PF13899 Thioredoxin-like 531 612 2.1E-11 T 09-03-2017 NA29_RS22660 9e45aad9b1849b3fb43b2c456910e239 645 ProSitePatterns PS00194 Thioredoxin family active site. 548 566 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 NA29_RS22660 9e45aad9b1849b3fb43b2c456910e239 645 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 227 405 1.2E-12 T 09-03-2017 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 NA29_RS22660 9e45aad9b1849b3fb43b2c456910e239 645 SUPERFAMILY SSF74863 35 147 1.7E-24 T 09-03-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain NA29_RS22660 9e45aad9b1849b3fb43b2c456910e239 645 SUPERFAMILY SSF52833 525 637 5.29E-24 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS22660 9e45aad9b1849b3fb43b2c456910e239 645 Gene3D G3DSA:2.60.40.1250 34 148 4.3E-26 T 09-03-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain NA29_RS21725 f392a0a372cbb931c3ef490095dbf281 506 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 384 497 3.8E-23 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS21725 f392a0a372cbb931c3ef490095dbf281 506 SUPERFAMILY SSF55874 323 498 3.8E-38 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS21725 f392a0a372cbb931c3ef490095dbf281 506 SUPERFAMILY SSF47384 252 333 1.16E-17 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS21725 f392a0a372cbb931c3ef490095dbf281 506 Gene3D G3DSA:3.30.565.10 341 500 5.1E-37 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS21725 f392a0a372cbb931c3ef490095dbf281 506 SMART SM00388 269 334 6.6E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS21725 f392a0a372cbb931c3ef490095dbf281 506 Pfam PF00512 His Kinase A (phospho-acceptor) domain 270 333 3.2E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS21725 f392a0a372cbb931c3ef490095dbf281 506 Pfam PF08521 Two-component sensor kinase N-terminal 46 192 2.5E-42 T 09-03-2017 IPR013727 Two-component sensor kinase, N-terminal NA29_RS21725 f392a0a372cbb931c3ef490095dbf281 506 Gene3D G3DSA:1.10.287.130 262 330 4.0E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS21725 f392a0a372cbb931c3ef490095dbf281 506 SMART SM00387 381 498 1.4E-37 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS21725 f392a0a372cbb931c3ef490095dbf281 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 434 6.7E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS21725 f392a0a372cbb931c3ef490095dbf281 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 448 6.7E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS21725 f392a0a372cbb931c3ef490095dbf281 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 470 6.7E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS21725 f392a0a372cbb931c3ef490095dbf281 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 495 6.7E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS21725 f392a0a372cbb931c3ef490095dbf281 506 Pfam PF00672 HAMP domain 202 264 3.0E-7 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS09475 67ed9c5684c75c77153467ab35264f21 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 296 1.0E-10 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS09475 67ed9c5684c75c77153467ab35264f21 301 Gene3D G3DSA:1.10.3720.10 29 296 5.4E-48 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS09475 67ed9c5684c75c77153467ab35264f21 301 SUPERFAMILY SSF161098 26 296 1.13E-49 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS02455 7fb758dd5e88441c400ed5eb079c00c8 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 180 320 1.2E-47 T 09-03-2017 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 NA29_RS02455 7fb758dd5e88441c400ed5eb079c00c8 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 188 209 - T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 NA29_RS02455 7fb758dd5e88441c400ed5eb079c00c8 339 Gene3D G3DSA:1.10.1040.10 184 326 4.3E-54 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS02455 7fb758dd5e88441c400ed5eb079c00c8 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 322 34.78 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 NA29_RS02455 7fb758dd5e88441c400ed5eb079c00c8 339 PIRSF PIRSF000114 1 332 4.7E-90 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 NA29_RS02455 7fb758dd5e88441c400ed5eb079c00c8 339 SUPERFAMILY SSF51735 1 180 1.14E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS02455 7fb758dd5e88441c400ed5eb079c00c8 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 173 197 6.6E-35 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 NA29_RS02455 7fb758dd5e88441c400ed5eb079c00c8 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 238 255 6.6E-35 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 NA29_RS02455 7fb758dd5e88441c400ed5eb079c00c8 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 6.6E-35 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 NA29_RS02455 7fb758dd5e88441c400ed5eb079c00c8 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 6.6E-35 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 NA29_RS02455 7fb758dd5e88441c400ed5eb079c00c8 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 198 222 6.6E-35 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 NA29_RS02455 7fb758dd5e88441c400ed5eb079c00c8 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 157 8.0E-37 T 09-03-2017 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 NA29_RS02455 7fb758dd5e88441c400ed5eb079c00c8 339 SUPERFAMILY SSF48179 179 331 2.72E-53 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS02455 7fb758dd5e88441c400ed5eb079c00c8 339 Gene3D G3DSA:3.40.50.720 1 183 8.3E-53 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18630 9f701b8fb93536583481f467c727ee87 323 SUPERFAMILY SSF53850 23 287 2.65E-61 T 09-03-2017 NA29_RS18630 9f701b8fb93536583481f467c727ee87 323 PIRSF PIRSF002825 4 313 2.6E-52 T 09-03-2017 IPR026045 Ferric binding protein NA29_RS18630 9f701b8fb93536583481f467c727ee87 323 Pfam PF13343 Bacterial extracellular solute-binding protein 72 281 7.0E-31 T 09-03-2017 NA29_RS18630 9f701b8fb93536583481f467c727ee87 323 Gene3D G3DSA:3.40.190.10 256 299 4.5E-37 T 09-03-2017 NA29_RS18630 9f701b8fb93536583481f467c727ee87 323 Gene3D G3DSA:3.40.190.10 7 120 4.5E-37 T 09-03-2017 NA29_RS18630 9f701b8fb93536583481f467c727ee87 323 Gene3D G3DSA:3.40.190.10 122 255 1.5E-28 T 09-03-2017 NA29_RS13435 5cb78ae95e86e372480c66bf83218ea9 277 SMART SM00850 181 277 6.5E-24 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 NA29_RS13435 5cb78ae95e86e372480c66bf83218ea9 277 Gene3D G3DSA:2.40.50.40 173 239 3.0E-18 T 09-03-2017 NA29_RS13435 5cb78ae95e86e372480c66bf83218ea9 277 Gene3D G3DSA:3.40.50.2300 7 122 5.3E-29 T 09-03-2017 NA29_RS13435 5cb78ae95e86e372480c66bf83218ea9 277 SMART SM00448 4 116 2.1E-23 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS13435 5cb78ae95e86e372480c66bf83218ea9 277 Pfam PF04397 LytTr DNA-binding domain 182 277 7.3E-23 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 NA29_RS13435 5cb78ae95e86e372480c66bf83218ea9 277 Pfam PF00072 Response regulator receiver domain 7 116 2.0E-20 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS13435 5cb78ae95e86e372480c66bf83218ea9 277 SUPERFAMILY SSF52172 2 127 5.12E-29 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS02385 8d30ad9df8c32f085c354c04b99bcc0c 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.3E-41 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NA29_RS02385 8d30ad9df8c32f085c354c04b99bcc0c 112 SUPERFAMILY SSF54913 1 112 1.91E-45 T 09-03-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta NA29_RS02385 8d30ad9df8c32f085c354c04b99bcc0c 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 09-03-2017 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 NA29_RS02385 8d30ad9df8c32f085c354c04b99bcc0c 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 09-03-2017 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 NA29_RS02385 8d30ad9df8c32f085c354c04b99bcc0c 112 SMART SM00938 4 105 3.5E-64 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NA29_RS02385 8d30ad9df8c32f085c354c04b99bcc0c 112 PIRSF PIRSF039144 1 112 2.1E-54 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NA29_RS02385 8d30ad9df8c32f085c354c04b99bcc0c 112 PRINTS PR00340 P-II protein signature 2 17 3.6E-42 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NA29_RS02385 8d30ad9df8c32f085c354c04b99bcc0c 112 PRINTS PR00340 P-II protein signature 23 41 3.6E-42 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NA29_RS02385 8d30ad9df8c32f085c354c04b99bcc0c 112 PRINTS PR00340 P-II protein signature 52 75 3.6E-42 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NA29_RS02385 8d30ad9df8c32f085c354c04b99bcc0c 112 PRINTS PR00340 P-II protein signature 83 103 3.6E-42 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NA29_RS02385 8d30ad9df8c32f085c354c04b99bcc0c 112 Gene3D G3DSA:3.30.70.120 1 112 1.6E-50 T 09-03-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal NA29_RS01535 54ba6ba48075bfabfbc7cb13ee74c897 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 5.8E-21 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS01535 54ba6ba48075bfabfbc7cb13ee74c897 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 5.8E-21 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS01535 54ba6ba48075bfabfbc7cb13ee74c897 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.8E-21 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS01535 54ba6ba48075bfabfbc7cb13ee74c897 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 5.8E-21 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS01535 54ba6ba48075bfabfbc7cb13ee74c897 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.8E-21 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS01535 54ba6ba48075bfabfbc7cb13ee74c897 264 Gene3D G3DSA:3.40.50.720 8 244 6.4E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS01535 54ba6ba48075bfabfbc7cb13ee74c897 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 243 7.3E-30 T 09-03-2017 NA29_RS01535 54ba6ba48075bfabfbc7cb13ee74c897 264 SUPERFAMILY SSF51735 8 244 3.09E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS03815 f4052dbb12db9530bbef8239bbd450cf 303 Gene3D G3DSA:3.40.190.10 99 183 1.1E-22 T 09-03-2017 NA29_RS03815 f4052dbb12db9530bbef8239bbd450cf 303 SUPERFAMILY SSF53850 97 301 7.6E-44 T 09-03-2017 NA29_RS03815 f4052dbb12db9530bbef8239bbd450cf 303 SUPERFAMILY SSF46785 9 119 9.3E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03815 f4052dbb12db9530bbef8239bbd450cf 303 Gene3D G3DSA:1.10.10.10 10 94 2.1E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03815 f4052dbb12db9530bbef8239bbd450cf 303 Gene3D G3DSA:3.40.190.10 184 267 7.2E-23 T 09-03-2017 NA29_RS03815 f4052dbb12db9530bbef8239bbd450cf 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 1.7E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03815 f4052dbb12db9530bbef8239bbd450cf 303 Pfam PF03466 LysR substrate binding domain 95 298 2.0E-40 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS00655 7bd6b51d148b30edb833dd74b54e5d0e 68 SUPERFAMILY SSF47598 4 58 1.08E-8 T 09-03-2017 IPR010985 Ribbon-helix-helix GO:0006355 NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 SUPERFAMILY SSF52283 392 471 2.38E-112 T 09-03-2017 NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 SUPERFAMILY SSF52283 184 231 2.38E-112 T 09-03-2017 NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 SUPERFAMILY SSF52283 9 148 2.38E-112 T 09-03-2017 NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 PIRSF PIRSF001109 2 471 2.7E-187 T 09-03-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 Gene3D G3DSA:3.40.50.1480 392 471 2.4E-35 T 09-03-2017 NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 SMART SM00997 232 391 1.3E-113 T 09-03-2017 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 12 463 3.7E-184 T 09-03-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 SUPERFAMILY SSF51735 232 391 6.02E-80 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 Gene3D G3DSA:3.40.50.1480 183 270 6.0E-122 T 09-03-2017 NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 Gene3D G3DSA:3.40.50.1480 8 147 6.0E-122 T 09-03-2017 NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 232 391 2.2E-81 T 09-03-2017 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 83 97 - T 09-03-2017 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 7 463 48.055 T 09-03-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 254 270 - T 09-03-2017 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 11 470 5.3E-143 T 09-03-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 Gene3D G3DSA:3.40.50.720 271 370 2.3E-12 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS01315 cb5234e6e07ec66f5f39e0540007740c 471 SMART SM00996 11 470 0.0 T 09-03-2017 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 NA29_RS08125 6d07c7fba1761ee3c929fa9f8b1ad26e 448 Gene3D G3DSA:1.20.1250.20 256 444 2.0E-24 T 09-03-2017 NA29_RS08125 6d07c7fba1761ee3c929fa9f8b1ad26e 448 Gene3D G3DSA:1.20.1250.20 34 238 5.1E-45 T 09-03-2017 NA29_RS08125 6d07c7fba1761ee3c929fa9f8b1ad26e 448 SUPERFAMILY SSF103473 21 446 1.44E-83 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS08125 6d07c7fba1761ee3c929fa9f8b1ad26e 448 Pfam PF07690 Major Facilitator Superfamily 45 407 5.5E-44 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS05115 597680696a04196769948524788484f9 617 SUPERFAMILY SSF51338 494 538 3.14E-20 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS05115 597680696a04196769948524788484f9 617 SUPERFAMILY SSF51338 4 63 3.14E-20 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS05115 597680696a04196769948524788484f9 617 Gene3D G3DSA:3.20.20.140 198 481 4.1E-19 T 09-03-2017 NA29_RS05115 597680696a04196769948524788484f9 617 Gene3D G3DSA:2.30.40.10 4 94 2.2E-15 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS05115 597680696a04196769948524788484f9 617 SUPERFAMILY SSF51556 204 488 1.56E-44 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS05115 597680696a04196769948524788484f9 617 SUPERFAMILY SSF51556 62 124 1.56E-44 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS05115 597680696a04196769948524788484f9 617 Pfam PF07969 Amidohydrolase family 51 535 8.6E-123 T 09-03-2017 IPR013108 Amidohydrolase 3 NA29_RS21820 aa02557fad9b4993edd0c722f89ed326 374 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 15 346 3.7E-85 T 09-03-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 NA29_RS21820 aa02557fad9b4993edd0c722f89ed326 374 Gene3D G3DSA:3.20.20.70 13 371 5.2E-134 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS21820 aa02557fad9b4993edd0c722f89ed326 374 SUPERFAMILY SSF51395 14 371 3.36E-126 T 09-03-2017 NA29_RS15530 25de899eba5237518de5b3065d11f20b 643 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS15530 25de899eba5237518de5b3065d11f20b 643 SMART SM00382 28 234 5.7E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS15530 25de899eba5237518de5b3065d11f20b 643 SMART SM00382 348 518 9.5E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS15530 25de899eba5237518de5b3065d11f20b 643 Gene3D G3DSA:3.40.50.300 8 106 4.9E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15530 25de899eba5237518de5b3065d11f20b 643 Gene3D G3DSA:3.40.50.300 140 284 4.9E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15530 25de899eba5237518de5b3065d11f20b 643 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS15530 25de899eba5237518de5b3065d11f20b 643 SUPERFAMILY SSF52540 7 237 8.91E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15530 25de899eba5237518de5b3065d11f20b 643 SUPERFAMILY SSF52540 311 513 3.09E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15530 25de899eba5237518de5b3065d11f20b 643 Pfam PF00005 ABC transporter 340 473 2.6E-23 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS15530 25de899eba5237518de5b3065d11f20b 643 Pfam PF00005 ABC transporter 19 189 3.4E-26 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS15530 25de899eba5237518de5b3065d11f20b 643 Pfam PF16326 ABC transporter C-terminal domain 567 635 1.2E-18 T 09-03-2017 IPR032524 ABC transporter Uup, C-terminal GO:0003677 NA29_RS15530 25de899eba5237518de5b3065d11f20b 643 Gene3D G3DSA:3.40.50.300 325 514 3.4E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15530 25de899eba5237518de5b3065d11f20b 643 Pfam PF12848 ABC transporter 228 304 3.3E-11 T 09-03-2017 IPR032781 ABC-transporter extension domain NA29_RS00465 ff50e7eb8e0d4a9cb45a00fcfd4f24cc 309 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 72 1.2E-9 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 NA29_RS00465 ff50e7eb8e0d4a9cb45a00fcfd4f24cc 309 Pfam PF01380 SIS domain 131 258 3.9E-12 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 NA29_RS00465 ff50e7eb8e0d4a9cb45a00fcfd4f24cc 309 Gene3D G3DSA:3.40.50.10490 107 266 4.4E-16 T 09-03-2017 NA29_RS00465 ff50e7eb8e0d4a9cb45a00fcfd4f24cc 309 SUPERFAMILY SSF53697 100 264 7.48E-20 T 09-03-2017 NA29_RS00465 ff50e7eb8e0d4a9cb45a00fcfd4f24cc 309 Gene3D G3DSA:1.10.10.10 7 79 2.1E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00465 ff50e7eb8e0d4a9cb45a00fcfd4f24cc 309 SUPERFAMILY SSF46689 8 79 1.25E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS01935 a0b1df5e86a7d99ff391ca6b268e6a7f 183 Pfam PF07152 YaeQ protein 1 173 7.1E-76 T 09-03-2017 IPR009822 YaeQ NA29_RS01935 a0b1df5e86a7d99ff391ca6b268e6a7f 183 Gene3D G3DSA:3.10.640.10 1 178 5.7E-79 T 09-03-2017 NA29_RS01935 a0b1df5e86a7d99ff391ca6b268e6a7f 183 PIRSF PIRSF011484 1 181 5.6E-69 T 09-03-2017 IPR009822 YaeQ NA29_RS01935 a0b1df5e86a7d99ff391ca6b268e6a7f 183 SMART SM01322 1 176 2.4E-107 T 09-03-2017 IPR009822 YaeQ NA29_RS01935 a0b1df5e86a7d99ff391ca6b268e6a7f 183 SUPERFAMILY SSF52980 4 177 2.06E-70 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 NA29_RS11635 884f6ca1e0463da140fb518c06a72596 323 Pfam PF03466 LysR substrate binding domain 87 299 7.7E-29 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS11635 884f6ca1e0463da140fb518c06a72596 323 SUPERFAMILY SSF53850 89 307 3.44E-29 T 09-03-2017 NA29_RS11635 884f6ca1e0463da140fb518c06a72596 323 SUPERFAMILY SSF46785 1 111 4.69E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11635 884f6ca1e0463da140fb518c06a72596 323 Gene3D G3DSA:3.40.190.10 201 256 3.6E-9 T 09-03-2017 NA29_RS11635 884f6ca1e0463da140fb518c06a72596 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11635 884f6ca1e0463da140fb518c06a72596 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11635 884f6ca1e0463da140fb518c06a72596 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11635 884f6ca1e0463da140fb518c06a72596 323 Gene3D G3DSA:3.40.190.10 88 200 4.6E-21 T 09-03-2017 NA29_RS11635 884f6ca1e0463da140fb518c06a72596 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.0E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11635 884f6ca1e0463da140fb518c06a72596 323 Gene3D G3DSA:1.10.10.10 1 84 1.6E-30 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17810 28d6497ad1294c94c372fac39f9ed051 97 SUPERFAMILY SSF47729 1 91 2.06E-29 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NA29_RS17810 28d6497ad1294c94c372fac39f9ed051 97 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.637 T 09-03-2017 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 NA29_RS17810 28d6497ad1294c94c372fac39f9ed051 97 Gene3D G3DSA:4.10.520.10 1 93 3.4E-32 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NA29_RS17810 28d6497ad1294c94c372fac39f9ed051 97 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.1E-16 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS17810 28d6497ad1294c94c372fac39f9ed051 97 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.1E-16 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS17810 28d6497ad1294c94c372fac39f9ed051 97 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.1E-16 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS17810 28d6497ad1294c94c372fac39f9ed051 97 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 6.3E-39 T 09-03-2017 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 NA29_RS17810 28d6497ad1294c94c372fac39f9ed051 97 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.7E-28 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS17810 28d6497ad1294c94c372fac39f9ed051 97 SMART SM00411 1 91 1.1E-37 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS24885 71d951457cbaa02ede48e8825c94eb7b 295 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 138 293 2.5E-68 T 09-03-2017 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 NA29_RS24885 71d951457cbaa02ede48e8825c94eb7b 295 Pfam PF10135 Rod binding protein 61 108 9.0E-16 T 09-03-2017 IPR019301 Flagellar protein FlgJ, N-terminal NA29_RS24885 71d951457cbaa02ede48e8825c94eb7b 295 SMART SM00047 141 295 1.0E-36 T 09-03-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 NA29_RS24885 71d951457cbaa02ede48e8825c94eb7b 295 Gene3D G3DSA:1.10.530.10 146 184 3.6E-4 T 09-03-2017 NA29_RS24885 71d951457cbaa02ede48e8825c94eb7b 295 Gene3D G3DSA:1.10.530.10 260 284 3.6E-4 T 09-03-2017 NA29_RS24885 71d951457cbaa02ede48e8825c94eb7b 295 PRINTS PR01002 Flagellar protein FlgJ signature 39 62 5.3E-41 T 09-03-2017 NA29_RS24885 71d951457cbaa02ede48e8825c94eb7b 295 PRINTS PR01002 Flagellar protein FlgJ signature 170 188 5.3E-41 T 09-03-2017 NA29_RS24885 71d951457cbaa02ede48e8825c94eb7b 295 PRINTS PR01002 Flagellar protein FlgJ signature 190 211 5.3E-41 T 09-03-2017 NA29_RS24885 71d951457cbaa02ede48e8825c94eb7b 295 PRINTS PR01002 Flagellar protein FlgJ signature 234 255 5.3E-41 T 09-03-2017 NA29_RS24885 71d951457cbaa02ede48e8825c94eb7b 295 PRINTS PR01002 Flagellar protein FlgJ signature 17 37 5.3E-41 T 09-03-2017 NA29_RS24885 71d951457cbaa02ede48e8825c94eb7b 295 PRINTS PR01002 Flagellar protein FlgJ signature 212 233 5.3E-41 T 09-03-2017 NA29_RS24885 71d951457cbaa02ede48e8825c94eb7b 295 PRINTS PR01002 Flagellar protein FlgJ signature 277 295 5.3E-41 T 09-03-2017 NA29_RS24885 71d951457cbaa02ede48e8825c94eb7b 295 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 157 293 5.0E-21 T 09-03-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 NA29_RS23975 479a61410305b61ca31850b90355a289 287 SUPERFAMILY SSF53213 6 285 1.83E-37 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS23975 479a61410305b61ca31850b90355a289 287 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 284 5.0E-23 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS23975 479a61410305b61ca31850b90355a289 287 Gene3D G3DSA:3.40.830.10 1 263 4.1E-24 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS17095 c32957ca564cc6b202cedee63d98f0e0 314 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 50 309 4.2E-65 T 09-03-2017 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 NA29_RS17095 c32957ca564cc6b202cedee63d98f0e0 314 PIRSF PIRSF001439 1 313 1.5E-66 T 09-03-2017 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 NA29_RS17095 c32957ca564cc6b202cedee63d98f0e0 314 SUPERFAMILY SSF51735 1 311 2.76E-86 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17095 c32957ca564cc6b202cedee63d98f0e0 314 Gene3D G3DSA:3.40.50.720 137 295 1.1E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17095 c32957ca564cc6b202cedee63d98f0e0 314 Gene3D G3DSA:3.30.1780.10 1 136 2.1E-37 T 09-03-2017 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 NA29_RS10875 17ec06910b01c453f99918b5f4b2d429 225 SUPERFAMILY SSF88659 121 182 9.72E-14 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS10875 17ec06910b01c453f99918b5f4b2d429 225 Pfam PF08281 Sigma-70, region 4 127 178 2.3E-13 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS10875 17ec06910b01c453f99918b5f4b2d429 225 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 181 7.3E-23 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS10875 17ec06910b01c453f99918b5f4b2d429 225 Gene3D G3DSA:1.10.1740.10 14 86 1.2E-18 T 09-03-2017 NA29_RS10875 17ec06910b01c453f99918b5f4b2d429 225 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 40 70 - T 09-03-2017 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS10875 17ec06910b01c453f99918b5f4b2d429 225 SUPERFAMILY SSF88946 14 83 2.16E-17 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS10875 17ec06910b01c453f99918b5f4b2d429 225 Gene3D G3DSA:1.10.10.10 122 183 3.6E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10875 17ec06910b01c453f99918b5f4b2d429 225 Pfam PF04542 Sigma-70 region 2 21 83 5.8E-14 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS03215 65cf717320d4928e010daae783fb531c 365 PIRSF PIRSF006468 7 365 2.2E-133 T 09-03-2017 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: R-HSA-70895 NA29_RS03215 65cf717320d4928e010daae783fb531c 365 Gene3D G3DSA:3.20.10.10 182 351 1.2E-66 T 09-03-2017 NA29_RS03215 65cf717320d4928e010daae783fb531c 365 Pfam PF01063 Amino-transferase class IV 77 320 4.9E-34 T 09-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 NA29_RS03215 65cf717320d4928e010daae783fb531c 365 ProSitePatterns PS00770 Aminotransferases class-IV signature. 240 270 - T 09-03-2017 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 NA29_RS03215 65cf717320d4928e010daae783fb531c 365 Gene3D G3DSA:3.30.470.10 20 181 9.3E-70 T 09-03-2017 NA29_RS03215 65cf717320d4928e010daae783fb531c 365 SUPERFAMILY SSF56752 6 361 2.35E-114 T 09-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 NA29_RS03215 65cf717320d4928e010daae783fb531c 365 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 51 364 9.9E-125 T 09-03-2017 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: R-HSA-70895 NA29_RS06930 1a9cefb4ac4e0a2738adcfc784785d8e 590 Pfam PF00563 EAL domain 336 568 3.4E-71 T 09-03-2017 IPR001633 EAL domain NA29_RS06930 1a9cefb4ac4e0a2738adcfc784785d8e 590 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 155 318 2.1E-45 T 09-03-2017 IPR000160 GGDEF domain NA29_RS06930 1a9cefb4ac4e0a2738adcfc784785d8e 590 Gene3D G3DSA:3.20.20.450 333 580 1.0E-90 T 09-03-2017 IPR001633 EAL domain NA29_RS06930 1a9cefb4ac4e0a2738adcfc784785d8e 590 SUPERFAMILY SSF141868 335 580 3.53E-84 T 09-03-2017 IPR001633 EAL domain NA29_RS06930 1a9cefb4ac4e0a2738adcfc784785d8e 590 SMART SM00052 329 574 1.7E-107 T 09-03-2017 IPR001633 EAL domain NA29_RS06930 1a9cefb4ac4e0a2738adcfc784785d8e 590 SUPERFAMILY SSF55073 164 321 3.84E-48 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS06930 1a9cefb4ac4e0a2738adcfc784785d8e 590 SUPERFAMILY SSF55785 38 149 2.28E-8 T 09-03-2017 IPR000014 PAS domain NA29_RS06930 1a9cefb4ac4e0a2738adcfc784785d8e 590 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 314 2.0E-47 T 09-03-2017 IPR000160 GGDEF domain NA29_RS06930 1a9cefb4ac4e0a2738adcfc784785d8e 590 Gene3D G3DSA:3.30.70.270 160 323 3.6E-54 T 09-03-2017 NA29_RS06930 1a9cefb4ac4e0a2738adcfc784785d8e 590 SMART SM00267 147 319 3.6E-62 T 09-03-2017 IPR000160 GGDEF domain NA29_RS06930 1a9cefb4ac4e0a2738adcfc784785d8e 590 Gene3D G3DSA:3.30.450.20 37 158 4.0E-8 T 09-03-2017 NA29_RS20265 8b788b14a7a07414f90dd7f15d543a06 413 SUPERFAMILY SSF51338 351 410 6.84E-15 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS20265 8b788b14a7a07414f90dd7f15d543a06 413 SUPERFAMILY SSF51338 3 57 1.68E-15 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS20265 8b788b14a7a07414f90dd7f15d543a06 413 SUPERFAMILY SSF51556 58 368 2.48E-87 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS20265 8b788b14a7a07414f90dd7f15d543a06 413 Gene3D G3DSA:2.30.40.10 2 59 1.6E-23 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS20265 8b788b14a7a07414f90dd7f15d543a06 413 Gene3D G3DSA:2.30.40.10 378 409 1.6E-23 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS20265 8b788b14a7a07414f90dd7f15d543a06 413 Pfam PF01979 Amidohydrolase family 54 408 3.0E-41 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS20265 8b788b14a7a07414f90dd7f15d543a06 413 Gene3D G3DSA:3.20.20.140 353 377 1.1E-5 T 09-03-2017 NA29_RS20265 8b788b14a7a07414f90dd7f15d543a06 413 Gene3D G3DSA:3.20.20.140 60 352 7.3E-93 T 09-03-2017 NA29_RS16060 2b33fc4e6210148df42e0a35ff394487 319 Gene3D G3DSA:3.20.20.190 13 304 2.6E-67 T 09-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NA29_RS16060 2b33fc4e6210148df42e0a35ff394487 319 SMART SM00148 23 164 5.3E-7 T 09-03-2017 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain NA29_RS16060 2b33fc4e6210148df42e0a35ff394487 319 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 32 163 3.6E-8 T 09-03-2017 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain NA29_RS16060 2b33fc4e6210148df42e0a35ff394487 319 SUPERFAMILY SSF51695 16 300 1.57E-51 T 09-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NA29_RS16935 43456e98aafc2fe0bbe43c0b72bfd31b 276 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 123 138 - T 09-03-2017 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 NA29_RS16935 43456e98aafc2fe0bbe43c0b72bfd31b 276 Gene3D G3DSA:1.10.600.10 14 273 9.2E-69 T 09-03-2017 IPR008949 Isoprenoid synthase domain NA29_RS16935 43456e98aafc2fe0bbe43c0b72bfd31b 276 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 153 178 - T 09-03-2017 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 NA29_RS16935 43456e98aafc2fe0bbe43c0b72bfd31b 276 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 13 275 2.0E-96 T 09-03-2017 IPR017828 Squalene/phytoene synthase HpnD GO:0016117|GO:0016767 NA29_RS16935 43456e98aafc2fe0bbe43c0b72bfd31b 276 Pfam PF00494 Squalene/phytoene synthase 13 265 1.7E-65 T 09-03-2017 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 NA29_RS16935 43456e98aafc2fe0bbe43c0b72bfd31b 276 SUPERFAMILY SSF48576 14 274 1.12E-69 T 09-03-2017 IPR008949 Isoprenoid synthase domain NA29_RS23275 c9aee9534e52b2690bb11c8dd4deda4d 245 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 36 42 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NA29_RS23275 c9aee9534e52b2690bb11c8dd4deda4d 245 SUPERFAMILY SSF53335 11 243 1.98E-54 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS23275 c9aee9534e52b2690bb11c8dd4deda4d 245 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 88 108 6.6E-25 T 09-03-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NA29_RS23275 c9aee9534e52b2690bb11c8dd4deda4d 245 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 223 243 6.6E-25 T 09-03-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NA29_RS23275 c9aee9534e52b2690bb11c8dd4deda4d 245 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 200 218 6.6E-25 T 09-03-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NA29_RS23275 c9aee9534e52b2690bb11c8dd4deda4d 245 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 32 46 6.6E-25 T 09-03-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NA29_RS23275 c9aee9534e52b2690bb11c8dd4deda4d 245 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 182 199 6.6E-25 T 09-03-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NA29_RS23275 c9aee9534e52b2690bb11c8dd4deda4d 245 Pfam PF01555 DNA methylase 179 238 3.7E-16 T 09-03-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 NA29_RS23275 c9aee9534e52b2690bb11c8dd4deda4d 245 Pfam PF01555 DNA methylase 33 158 1.6E-10 T 09-03-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 NA29_RS23275 c9aee9534e52b2690bb11c8dd4deda4d 245 Gene3D G3DSA:3.40.50.150 10 244 3.1E-55 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS13320 234f99b6eb1b7d90c508d0fef30b764b 298 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 10 293 6.3E-122 T 09-03-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 NA29_RS13320 234f99b6eb1b7d90c508d0fef30b764b 298 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 10 287 3.8E-64 T 09-03-2017 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 NA29_RS13320 234f99b6eb1b7d90c508d0fef30b764b 298 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 2 298 50.39 T 09-03-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 NA29_RS13320 234f99b6eb1b7d90c508d0fef30b764b 298 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 203 209 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NA29_RS13320 234f99b6eb1b7d90c508d0fef30b764b 298 SUPERFAMILY SSF53335 12 268 4.67E-48 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS13320 234f99b6eb1b7d90c508d0fef30b764b 298 Gene3D G3DSA:1.10.8.10 11 102 3.3E-9 T 09-03-2017 NA29_RS13320 234f99b6eb1b7d90c508d0fef30b764b 298 Gene3D G3DSA:3.40.50.150 104 282 2.3E-50 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS13320 234f99b6eb1b7d90c508d0fef30b764b 298 PIRSF PIRSF037167 1 298 2.2E-126 T 09-03-2017 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 NA29_RS13320 234f99b6eb1b7d90c508d0fef30b764b 298 Pfam PF05175 Methyltransferase small domain 132 214 8.1E-14 T 09-03-2017 IPR007848 Methyltransferase small domain GO:0008168 NA29_RS13220 330ccac624437c9cb3dd16088f7090ca 399 Gene3D G3DSA:3.40.50.720 2 151 9.6E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13220 330ccac624437c9cb3dd16088f7090ca 399 SUPERFAMILY SSF69055 299 391 2.35E-31 T 09-03-2017 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 NA29_RS13220 330ccac624437c9cb3dd16088f7090ca 399 SUPERFAMILY SSF55347 127 271 8.5E-61 T 09-03-2017 NA29_RS13220 330ccac624437c9cb3dd16088f7090ca 399 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 147 236 2.8E-38 T 09-03-2017 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 NA29_RS13220 330ccac624437c9cb3dd16088f7090ca 399 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 389 46.918 T 09-03-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 NA29_RS13220 330ccac624437c9cb3dd16088f7090ca 399 PIRSF PIRSF006205 2 394 5.5E-152 T 09-03-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 NA29_RS13220 330ccac624437c9cb3dd16088f7090ca 399 Gene3D G3DSA:1.10.1740.10 310 391 2.3E-30 T 09-03-2017 NA29_RS13220 330ccac624437c9cb3dd16088f7090ca 399 SUPERFAMILY SSF51735 3 151 2.43E-44 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13220 330ccac624437c9cb3dd16088f7090ca 399 Pfam PF13288 DXP reductoisomerase C-terminal domain 268 384 1.4E-40 T 09-03-2017 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 NA29_RS13220 330ccac624437c9cb3dd16088f7090ca 399 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 391 1.9E-152 T 09-03-2017 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 NA29_RS13220 330ccac624437c9cb3dd16088f7090ca 399 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 6 133 1.0E-45 T 09-03-2017 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 NA29_RS15050 f44ee47978e942b1d89cbff337e77366 430 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 347 358 - T 09-03-2017 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15050 f44ee47978e942b1d89cbff337e77366 430 SUPERFAMILY SSF140490 331 428 1.83E-37 T 09-03-2017 NA29_RS15050 f44ee47978e942b1d89cbff337e77366 430 SUPERFAMILY SSF142984 246 329 1.83E-26 T 09-03-2017 NA29_RS15050 f44ee47978e942b1d89cbff337e77366 430 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 338 419 4.8E-30 T 09-03-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15050 f44ee47978e942b1d89cbff337e77366 430 SMART SM00928 334 379 1.1E-24 T 09-03-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15050 f44ee47978e942b1d89cbff337e77366 430 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 53 224 6.2E-48 T 09-03-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15050 f44ee47978e942b1d89cbff337e77366 430 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 19 420 3.1E-194 T 09-03-2017 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15050 f44ee47978e942b1d89cbff337e77366 430 SUPERFAMILY SSF142019 18 245 1.57E-83 T 09-03-2017 NA29_RS15050 f44ee47978e942b1d89cbff337e77366 430 Pfam PF10531 SLBB domain 248 296 4.0E-12 T 09-03-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS19425 b08fe7500f63e20cf6e03eb692dc7c14 241 SUPERFAMILY SSF75625 3 239 7.32E-96 T 09-03-2017 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS19425 b08fe7500f63e20cf6e03eb692dc7c14 241 Gene3D G3DSA:3.30.70.980 135 205 2.9E-28 T 09-03-2017 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS19425 b08fe7500f63e20cf6e03eb692dc7c14 241 Pfam PF01709 Transcriptional regulator 5 237 1.3E-93 T 09-03-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS19425 b08fe7500f63e20cf6e03eb692dc7c14 241 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.511 T 09-03-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS19425 b08fe7500f63e20cf6e03eb692dc7c14 241 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 1.3E-94 T 09-03-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS19425 b08fe7500f63e20cf6e03eb692dc7c14 241 Gene3D G3DSA:3.30.1270.10 212 239 3.4E-36 T 09-03-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS19425 b08fe7500f63e20cf6e03eb692dc7c14 241 Gene3D G3DSA:3.30.1270.10 82 134 3.4E-36 T 09-03-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS19425 b08fe7500f63e20cf6e03eb692dc7c14 241 Gene3D G3DSA:1.10.10.200 1 79 1.4E-35 T 09-03-2017 IPR017856 Integrase, N-terminal zinc-binding domain-like NA29_RS13165 bfb74d2bc4f3a6f7fa063b5953ba142e 796 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 698 716 - T 09-03-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 NA29_RS13165 bfb74d2bc4f3a6f7fa063b5953ba142e 796 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 348 6.7E-115 T 09-03-2017 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 NA29_RS13165 bfb74d2bc4f3a6f7fa063b5953ba142e 796 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 418 429 - T 09-03-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 NA29_RS13165 bfb74d2bc4f3a6f7fa063b5953ba142e 796 SUPERFAMILY SSF56059 9 389 5.53E-107 T 09-03-2017 NA29_RS13165 bfb74d2bc4f3a6f7fa063b5953ba142e 796 Gene3D G3DSA:3.30.1490.20 9 198 2.5E-67 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NA29_RS13165 bfb74d2bc4f3a6f7fa063b5953ba142e 796 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 795 0.0 T 09-03-2017 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 NA29_RS13165 bfb74d2bc4f3a6f7fa063b5953ba142e 796 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 483 794 3.7E-62 T 09-03-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 NA29_RS13165 bfb74d2bc4f3a6f7fa063b5953ba142e 796 SUPERFAMILY SSF51621 468 794 2.66E-92 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS13165 bfb74d2bc4f3a6f7fa063b5953ba142e 796 Gene3D G3DSA:3.20.20.60 485 795 1.3E-99 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS13165 bfb74d2bc4f3a6f7fa063b5953ba142e 796 Gene3D G3DSA:3.30.470.20 201 360 5.9E-57 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS13165 bfb74d2bc4f3a6f7fa063b5953ba142e 796 Pfam PF00391 PEP-utilising enzyme, mobile domain 388 459 8.5E-26 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NA29_RS13165 bfb74d2bc4f3a6f7fa063b5953ba142e 796 SUPERFAMILY SSF52009 352 469 2.09E-33 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NA29_RS13165 bfb74d2bc4f3a6f7fa063b5953ba142e 796 Gene3D G3DSA:3.50.30.10 377 478 2.9E-36 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 NA29_RS13165 bfb74d2bc4f3a6f7fa063b5953ba142e 796 PIRSF PIRSF000854 5 796 0.0 T 09-03-2017 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 Gene3D G3DSA:2.40.30.10 890 986 9.4E-38 T 09-03-2017 NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 SUPERFAMILY SSF52540 484 657 3.84E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 SUPERFAMILY SSF46955 3 51 4.03E-10 T 09-03-2017 IPR009061 Putative DNA-binding domain NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 Gene3D G3DSA:3.30.56.50 3 51 5.9E-18 T 09-03-2017 NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 SUPERFAMILY SSF50447 661 743 6.42E-25 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 491 647 3.3E-32 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 Gene3D G3DSA:3.40.50.300 489 647 7.5E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 ProSitePatterns PS01176 Initiation factor 2 signature. 939 961 - T 09-03-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 SUPERFAMILY SSF52156 765 895 2.35E-38 T 09-03-2017 IPR023115 Translation initiation factor IF- 2, domain 3 NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 Pfam PF00009 Elongation factor Tu GTP binding domain 493 648 1.2E-34 T 09-03-2017 NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 986 17.735 T 09-03-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 99 1.6E-15 T 09-03-2017 IPR013575 Initiation factor 2 associated domain, bacterial NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 5.6E-8 T 09-03-2017 IPR006847 Translation initiation factor IF-2, N-terminal NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 411 461 9.4E-14 T 09-03-2017 IPR006847 Translation initiation factor IF-2, N-terminal NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 Gene3D G3DSA:3.40.50.10050 789 867 7.6E-26 T 09-03-2017 IPR023115 Translation initiation factor IF- 2, domain 3 NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 Pfam PF11987 Translation-initiation factor 2 773 878 5.5E-39 T 09-03-2017 IPR023115 Translation initiation factor IF- 2, domain 3 NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 SUPERFAMILY SSF50447 890 986 4.32E-34 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 406 987 6.0E-266 T 09-03-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 NA29_RS13745 9f6a7f0a3350c2f46ac86d9a2607d69a 988 Gene3D G3DSA:2.40.30.10 660 753 2.2E-25 T 09-03-2017 NA29_RS24470 b882496dda57f953acd9932560d39c30 268 Gene3D G3DSA:1.10.760.10 74 267 1.2E-51 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24470 b882496dda57f953acd9932560d39c30 268 SUPERFAMILY SSF46626 154 267 2.74E-29 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24470 b882496dda57f953acd9932560d39c30 268 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 41 268 1.1E-72 T 09-03-2017 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 NA29_RS24470 b882496dda57f953acd9932560d39c30 268 PIRSF PIRSF038455 11 268 6.4E-60 T 09-03-2017 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 NA29_RS24470 b882496dda57f953acd9932560d39c30 268 SUPERFAMILY SSF46626 26 148 1.65E-23 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS09480 68a548681f478c36704e8a42e88bd635 264 Gene3D G3DSA:1.10.3720.10 7 253 9.7E-55 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS09480 68a548681f478c36704e8a42e88bd635 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 254 4.9E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS09480 68a548681f478c36704e8a42e88bd635 264 SUPERFAMILY SSF161098 6 255 1.26E-57 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS22145 079f84ffe7f3603d54d4d49c76e5002b 333 Gene3D G3DSA:3.30.1330.10 9 147 8.0E-47 T 09-03-2017 IPR016188 PurM-like, N-terminal domain NA29_RS22145 079f84ffe7f3603d54d4d49c76e5002b 333 SUPERFAMILY SSF56042 151 304 4.19E-32 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain NA29_RS22145 079f84ffe7f3603d54d4d49c76e5002b 333 Pfam PF00586 AIR synthase related protein, N-terminal domain 37 145 9.8E-25 T 09-03-2017 IPR016188 PurM-like, N-terminal domain NA29_RS22145 079f84ffe7f3603d54d4d49c76e5002b 333 Gene3D G3DSA:3.90.650.10 153 332 1.5E-36 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain NA29_RS22145 079f84ffe7f3603d54d4d49c76e5002b 333 SUPERFAMILY SSF55326 9 145 1.11E-36 T 09-03-2017 NA29_RS22145 079f84ffe7f3603d54d4d49c76e5002b 333 PIRSF PIRSF005303 7 332 4.9E-78 T 09-03-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 NA29_RS22145 079f84ffe7f3603d54d4d49c76e5002b 333 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 11 326 27.59 T 09-03-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 NA29_RS22145 079f84ffe7f3603d54d4d49c76e5002b 333 Pfam PF02769 AIR synthase related protein, C-terminal domain 158 302 3.3E-6 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain NA29_RS22145 079f84ffe7f3603d54d4d49c76e5002b 333 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 13 307 1.6E-91 T 09-03-2017 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 NA29_RS19675 4d9d7ae0f9223030c8590acd39e4daff 460 Gene3D G3DSA:1.20.1250.20 10 176 1.6E-27 T 09-03-2017 NA29_RS19675 4d9d7ae0f9223030c8590acd39e4daff 460 SUPERFAMILY SSF103473 6 187 3.92E-56 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS19675 4d9d7ae0f9223030c8590acd39e4daff 460 SUPERFAMILY SSF103473 241 445 3.92E-56 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS19675 4d9d7ae0f9223030c8590acd39e4daff 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 393 412 6.7E-11 T 09-03-2017 NA29_RS19675 4d9d7ae0f9223030c8590acd39e4daff 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 131 155 6.7E-11 T 09-03-2017 NA29_RS19675 4d9d7ae0f9223030c8590acd39e4daff 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 156 180 6.7E-11 T 09-03-2017 NA29_RS19675 4d9d7ae0f9223030c8590acd39e4daff 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 101 121 6.7E-11 T 09-03-2017 NA29_RS19675 4d9d7ae0f9223030c8590acd39e4daff 460 PRINTS PR01036 Tetracycline resistance protein TetB signature 10 34 6.7E-11 T 09-03-2017 NA29_RS19675 4d9d7ae0f9223030c8590acd39e4daff 460 Gene3D G3DSA:1.20.1250.20 258 448 1.9E-15 T 09-03-2017 NA29_RS19675 4d9d7ae0f9223030c8590acd39e4daff 460 Pfam PF07690 Major Facilitator Superfamily 269 441 2.7E-10 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS19675 4d9d7ae0f9223030c8590acd39e4daff 460 Pfam PF07690 Major Facilitator Superfamily 11 190 1.1E-35 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS10450 4f2f416833ec809fcb4db22d8caad8d1 275 SUPERFAMILY SSF52540 17 258 6.61E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10450 4f2f416833ec809fcb4db22d8caad8d1 275 SMART SM00382 42 236 1.9E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS10450 4f2f416833ec809fcb4db22d8caad8d1 275 Pfam PF00005 ABC transporter 35 189 6.2E-25 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS10450 4f2f416833ec809fcb4db22d8caad8d1 275 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 237 258 4.7E-7 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS10450 4f2f416833ec809fcb4db22d8caad8d1 275 Gene3D G3DSA:3.40.50.300 15 256 6.6E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00435 b3708bdf5eb9c14b2bc650071745c292 283 Pfam PF03459 TOBE domain 218 278 5.7E-6 T 09-03-2017 IPR005116 Transport-associated OB, type 1 NA29_RS00435 b3708bdf5eb9c14b2bc650071745c292 283 Pfam PF03459 TOBE domain 144 206 2.5E-16 T 09-03-2017 IPR005116 Transport-associated OB, type 1 NA29_RS00435 b3708bdf5eb9c14b2bc650071745c292 283 SUPERFAMILY SSF50331 142 209 5.53E-19 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS00435 b3708bdf5eb9c14b2bc650071745c292 283 SUPERFAMILY SSF46785 22 126 6.53E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00435 b3708bdf5eb9c14b2bc650071745c292 283 PIRSF PIRSF005763 20 283 7.0E-89 T 09-03-2017 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 NA29_RS00435 b3708bdf5eb9c14b2bc650071745c292 283 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 38 126 5.6E-32 T 09-03-2017 IPR003725 Molybdenum-binding protein ModE, N-terminal NA29_RS00435 b3708bdf5eb9c14b2bc650071745c292 283 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 142 208 2.5E-19 T 09-03-2017 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 NA29_RS00435 b3708bdf5eb9c14b2bc650071745c292 283 SUPERFAMILY SSF50331 190 279 2.09E-10 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS00435 b3708bdf5eb9c14b2bc650071745c292 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 41 102 2.7E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00435 b3708bdf5eb9c14b2bc650071745c292 283 Gene3D G3DSA:2.40.50.100 140 204 7.3E-28 T 09-03-2017 NA29_RS00435 b3708bdf5eb9c14b2bc650071745c292 283 Gene3D G3DSA:2.40.50.100 219 281 2.8E-14 T 09-03-2017 NA29_RS00435 b3708bdf5eb9c14b2bc650071745c292 283 Gene3D G3DSA:1.10.10.10 21 139 2.6E-46 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16620 c7a2dec5bb5c4de15dec7fb177e896d0 519 Gene3D G3DSA:3.40.190.10 136 286 1.4E-51 T 09-03-2017 NA29_RS16620 c7a2dec5bb5c4de15dec7fb177e896d0 519 SUPERFAMILY SSF53850 36 518 1.19E-141 T 09-03-2017 NA29_RS16620 c7a2dec5bb5c4de15dec7fb177e896d0 519 Gene3D G3DSA:3.10.105.10 287 488 7.6E-57 T 09-03-2017 NA29_RS16620 c7a2dec5bb5c4de15dec7fb177e896d0 519 PIRSF PIRSF002741 3 519 6.3E-111 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 NA29_RS16620 c7a2dec5bb5c4de15dec7fb177e896d0 519 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 434 3.8E-98 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain NA29_RS12305 fca7a52667ccb5a079ba14f8ebc21787 144 Pfam PF11162 Protein of unknown function (DUF2946) 11 141 2.0E-16 T 09-03-2017 IPR021333 Protein of unknown function DUF2946 NA29_RS01295 ccebd7627a2b03363f61aa8b26835ae6 257 SUPERFAMILY SSF56219 1 254 1.44E-74 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase NA29_RS01295 ccebd7627a2b03363f61aa8b26835ae6 257 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 09-03-2017 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 NA29_RS01295 ccebd7627a2b03363f61aa8b26835ae6 257 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 246 1.2E-23 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase NA29_RS01295 ccebd7627a2b03363f61aa8b26835ae6 257 Gene3D G3DSA:3.60.10.10 1 254 2.3E-91 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase NA29_RS01295 ccebd7627a2b03363f61aa8b26835ae6 257 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 5.6E-76 T 09-03-2017 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 NA29_RS01295 ccebd7627a2b03363f61aa8b26835ae6 257 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 251 2.6E-71 T 09-03-2017 NA29_RS12095 d6593afe2c8d4886dabd5de485aeaf4b 422 Gene3D G3DSA:3.20.20.80 167 286 4.7E-4 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NA29_RS12095 d6593afe2c8d4886dabd5de485aeaf4b 422 SUPERFAMILY SSF51445 287 312 1.59E-11 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily NA29_RS12095 d6593afe2c8d4886dabd5de485aeaf4b 422 SUPERFAMILY SSF51445 139 254 1.59E-11 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily NA29_RS12095 d6593afe2c8d4886dabd5de485aeaf4b 422 Pfam PF13200 Putative glycosyl hydrolase domain 103 415 1.1E-106 T 09-03-2017 IPR025275 Putative glycosyl hydrolase domain DUF4015 NA29_RS12095 d6593afe2c8d4886dabd5de485aeaf4b 422 SUPERFAMILY SSF49464 25 103 3.34E-9 T 09-03-2017 IPR008969 Carboxypeptidase-like, regulatory domain NA29_RS12095 d6593afe2c8d4886dabd5de485aeaf4b 422 Gene3D G3DSA:2.60.40.1120 25 86 2.5E-8 T 09-03-2017 IPR014766 Carboxypeptidase, regulatory domain NA29_RS12095 d6593afe2c8d4886dabd5de485aeaf4b 422 Pfam PF13620 Carboxypeptidase regulatory-like domain 25 90 4.1E-9 T 09-03-2017 NA29_RS07475 34a82f707a26849ce4290e4c6ba66360 275 Pfam PF00892 EamA-like transporter family 141 274 5.5E-10 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS07475 34a82f707a26849ce4290e4c6ba66360 275 SUPERFAMILY SSF103481 42 134 1.28E-12 T 09-03-2017 NA29_RS07475 34a82f707a26849ce4290e4c6ba66360 275 SUPERFAMILY SSF103481 199 274 3.66E-11 T 09-03-2017 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 Pfam PF00403 Heavy-metal-associated domain 88 131 6.1E-6 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 SUPERFAMILY SSF55008 85 161 1.02E-8 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 Gene3D G3DSA:3.30.70.100 86 155 2.2E-6 T 09-03-2017 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 Gene3D G3DSA:3.40.50.1000 616 757 1.3E-42 T 09-03-2017 IPR023214 HAD-like domain NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 Gene3D G3DSA:3.40.50.1000 461 502 1.3E-42 T 09-03-2017 IPR023214 HAD-like domain NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 Pfam PF00122 E1-E2 ATPase 257 479 3.9E-60 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 SUPERFAMILY SSF81665 388 480 2.48E-16 T 09-03-2017 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 SUPERFAMILY SSF81665 226 290 2.48E-16 T 09-03-2017 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 SUPERFAMILY SSF81653 296 387 1.23E-20 T 09-03-2017 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 259 775 2.4E-77 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 712 724 7.1E-26 T 09-03-2017 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 688 707 7.1E-26 T 09-03-2017 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 613 624 7.1E-26 T 09-03-2017 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 337 351 7.1E-26 T 09-03-2017 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 488 502 7.1E-26 T 09-03-2017 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 635 645 7.1E-26 T 09-03-2017 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 Pfam PF00702 haloacid dehalogenase-like hydrolase 484 702 2.8E-44 T 09-03-2017 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 SUPERFAMILY SSF56784 546 788 5.0E-53 T 09-03-2017 IPR023214 HAD-like domain NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 SUPERFAMILY SSF56784 487 506 5.0E-53 T 09-03-2017 IPR023214 HAD-like domain NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 Gene3D G3DSA:2.70.150.10 237 388 3.9E-23 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 Gene3D G3DSA:3.40.1110.10 503 615 2.7E-19 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 490 496 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 NA29_RS12835 13335cbadcdf3c94f8814469e8675941 797 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 236 791 2.1E-175 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 NA29_RS00065 fb29bfd86da24e920bd332518c2f6160 447 PIRSF PIRSF000185 21 447 3.5E-118 T 09-03-2017 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 NA29_RS00065 fb29bfd86da24e920bd332518c2f6160 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 121 134 - T 09-03-2017 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-70614 NA29_RS00065 fb29bfd86da24e920bd332518c2f6160 447 Gene3D G3DSA:1.10.285.10 372 446 4.5E-27 T 09-03-2017 NA29_RS00065 fb29bfd86da24e920bd332518c2f6160 447 Gene3D G3DSA:1.10.285.10 6 66 1.7E-26 T 09-03-2017 NA29_RS00065 fb29bfd86da24e920bd332518c2f6160 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 201 445 8.1E-88 T 09-03-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 NA29_RS00065 fb29bfd86da24e920bd332518c2f6160 447 Gene3D G3DSA:3.40.50.720 208 371 5.3E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS00065 fb29bfd86da24e920bd332518c2f6160 447 SUPERFAMILY SSF53223 6 195 1.66E-73 T 09-03-2017 NA29_RS00065 fb29bfd86da24e920bd332518c2f6160 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 56 183 1.9E-50 T 09-03-2017 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 NA29_RS00065 fb29bfd86da24e920bd332518c2f6160 447 Gene3D G3DSA:3.40.192.10 67 187 1.2E-60 T 09-03-2017 NA29_RS00065 fb29bfd86da24e920bd332518c2f6160 447 SUPERFAMILY SSF51735 201 446 5.31E-79 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS00065 fb29bfd86da24e920bd332518c2f6160 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 113 127 5.0E-32 T 09-03-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 NA29_RS00065 fb29bfd86da24e920bd332518c2f6160 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 254 5.0E-32 T 09-03-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 NA29_RS00065 fb29bfd86da24e920bd332518c2f6160 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 371 382 5.0E-32 T 09-03-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 NA29_RS00065 fb29bfd86da24e920bd332518c2f6160 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 192 214 5.0E-32 T 09-03-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 NA29_RS00065 fb29bfd86da24e920bd332518c2f6160 447 SMART SM00839 203 445 1.2E-97 T 09-03-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 NA29_RS16255 8a1575ed9f1ee0add0deb6716d720c75 434 PRINTS PR00173 Glutamate-aspartate symporter signature 223 242 2.1E-31 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS16255 8a1575ed9f1ee0add0deb6716d720c75 434 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 2.1E-31 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS16255 8a1575ed9f1ee0add0deb6716d720c75 434 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 2.1E-31 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS16255 8a1575ed9f1ee0add0deb6716d720c75 434 PRINTS PR00173 Glutamate-aspartate symporter signature 50 70 2.1E-31 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS16255 8a1575ed9f1ee0add0deb6716d720c75 434 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 2.1E-31 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS16255 8a1575ed9f1ee0add0deb6716d720c75 434 PRINTS PR00173 Glutamate-aspartate symporter signature 354 374 2.1E-31 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS16255 8a1575ed9f1ee0add0deb6716d720c75 434 SUPERFAMILY SSF118215 15 397 4.32E-102 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS16255 8a1575ed9f1ee0add0deb6716d720c75 434 Gene3D G3DSA:1.10.3860.10 8 400 5.4E-104 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS16255 8a1575ed9f1ee0add0deb6716d720c75 434 Pfam PF00375 Sodium:dicarboxylate symporter family 16 399 3.1E-108 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS11680 ba076dcf12925e761383d1649c414455 866 PIRSF PIRSF001227 8 859 1.0E-122 T 09-03-2017 IPR014395 Penicillin acylase GO:0016811 NA29_RS11680 ba076dcf12925e761383d1649c414455 866 Gene3D G3DSA:2.30.120.10 381 448 1.3E-24 T 09-03-2017 NA29_RS11680 ba076dcf12925e761383d1649c414455 866 Gene3D G3DSA:1.10.439.10 44 199 8.9E-51 T 09-03-2017 IPR023343 Penicillin amidase type, domain1 GO:0016811 NA29_RS11680 ba076dcf12925e761383d1649c414455 866 Pfam PF01804 Penicillin amidase 47 848 1.8E-155 T 09-03-2017 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 NA29_RS11680 ba076dcf12925e761383d1649c414455 866 SUPERFAMILY SSF56235 46 233 1.39E-205 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS11680 ba076dcf12925e761383d1649c414455 866 SUPERFAMILY SSF56235 297 859 1.39E-205 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS11680 ba076dcf12925e761383d1649c414455 866 Gene3D G3DSA:3.60.20.10 305 380 5.1E-78 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS11680 ba076dcf12925e761383d1649c414455 866 Gene3D G3DSA:3.60.20.10 457 677 5.1E-78 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS11680 ba076dcf12925e761383d1649c414455 866 Gene3D G3DSA:1.10.287.150 200 241 6.4E-21 T 09-03-2017 NA29_RS06220 748fc89f0d6fe73eae80839816399070 105 Gene3D G3DSA:3.10.180.10 1 74 2.6E-5 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS06220 748fc89f0d6fe73eae80839816399070 105 SUPERFAMILY SSF54593 2 68 1.17E-8 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS03205 98b1cdd4be63f9aca09edc89f5884236 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.0E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03205 98b1cdd4be63f9aca09edc89f5884236 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.0E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03205 98b1cdd4be63f9aca09edc89f5884236 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.0E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03205 98b1cdd4be63f9aca09edc89f5884236 307 Gene3D G3DSA:3.40.190.10 96 179 2.9E-29 T 09-03-2017 NA29_RS03205 98b1cdd4be63f9aca09edc89f5884236 307 Gene3D G3DSA:1.10.10.10 3 83 4.2E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03205 98b1cdd4be63f9aca09edc89f5884236 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 2.8E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03205 98b1cdd4be63f9aca09edc89f5884236 307 Pfam PF03466 LysR substrate binding domain 93 293 1.9E-31 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS03205 98b1cdd4be63f9aca09edc89f5884236 307 SUPERFAMILY SSF46785 8 83 2.59E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03205 98b1cdd4be63f9aca09edc89f5884236 307 Gene3D G3DSA:3.40.190.10 180 260 4.0E-30 T 09-03-2017 NA29_RS03205 98b1cdd4be63f9aca09edc89f5884236 307 SUPERFAMILY SSF53850 96 296 1.99E-34 T 09-03-2017 NA29_RS12905 678ac96fb3e69334a64d769912384edf 312 Gene3D G3DSA:3.40.190.10 176 273 1.5E-25 T 09-03-2017 NA29_RS12905 678ac96fb3e69334a64d769912384edf 312 Gene3D G3DSA:3.40.190.10 92 175 8.5E-31 T 09-03-2017 NA29_RS12905 678ac96fb3e69334a64d769912384edf 312 Gene3D G3DSA:3.40.190.10 277 305 8.5E-31 T 09-03-2017 NA29_RS12905 678ac96fb3e69334a64d769912384edf 312 Pfam PF03466 LysR substrate binding domain 99 301 5.4E-25 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS12905 678ac96fb3e69334a64d769912384edf 312 Gene3D G3DSA:1.10.10.10 3 88 8.5E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12905 678ac96fb3e69334a64d769912384edf 312 SUPERFAMILY SSF46785 8 85 1.77E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12905 678ac96fb3e69334a64d769912384edf 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.8E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS12905 678ac96fb3e69334a64d769912384edf 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.8E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS12905 678ac96fb3e69334a64d769912384edf 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.8E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS12905 678ac96fb3e69334a64d769912384edf 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 2.6E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS12905 678ac96fb3e69334a64d769912384edf 312 SUPERFAMILY SSF53850 92 300 5.97E-44 T 09-03-2017 NA29_RS23840 92f8a0c94d83d9f607523ad8caf4b763 267 Pfam PF07650 KH domain 39 110 8.0E-20 T 09-03-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23840 92f8a0c94d83d9f607523ad8caf4b763 267 SUPERFAMILY SSF54814 2 106 4.71E-37 T 09-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 NA29_RS23840 92f8a0c94d83d9f607523ad8caf4b763 267 SUPERFAMILY SSF54821 108 206 8.37E-40 T 09-03-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23840 92f8a0c94d83d9f607523ad8caf4b763 267 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.0E-40 T 09-03-2017 NA29_RS23840 92f8a0c94d83d9f607523ad8caf4b763 267 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.1E-92 T 09-03-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 NA29_RS23840 92f8a0c94d83d9f607523ad8caf4b763 267 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.814 T 09-03-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 NA29_RS23840 92f8a0c94d83d9f607523ad8caf4b763 267 SMART SM00322 60 125 1.8E-8 T 09-03-2017 IPR004087 K Homology domain GO:0003676 NA29_RS23840 92f8a0c94d83d9f607523ad8caf4b763 267 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 09-03-2017 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23840 92f8a0c94d83d9f607523ad8caf4b763 267 Gene3D G3DSA:3.30.300.20 17 107 2.0E-32 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta NA29_RS23840 92f8a0c94d83d9f607523ad8caf4b763 267 Gene3D G3DSA:3.30.1140.32 108 206 4.9E-46 T 09-03-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS05305 e67b2b172d961821795b37cfe7d9635b 196 Gene3D G3DSA:3.40.630.30 16 196 9.3E-31 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS05305 e67b2b172d961821795b37cfe7d9635b 196 SUPERFAMILY SSF55729 27 196 5.58E-21 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS05305 e67b2b172d961821795b37cfe7d9635b 196 Pfam PF00583 Acetyltransferase (GNAT) family 91 170 5.9E-8 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS11910 b5a2a178dd62680e1da456392bd8a917 253 Pfam PF00459 Inositol monophosphatase family 7 224 2.2E-46 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS11910 b5a2a178dd62680e1da456392bd8a917 253 Gene3D G3DSA:3.40.190.80 165 244 2.0E-11 T 09-03-2017 NA29_RS11910 b5a2a178dd62680e1da456392bd8a917 253 SUPERFAMILY SSF56655 2 226 8.25E-56 T 09-03-2017 NA29_RS11910 b5a2a178dd62680e1da456392bd8a917 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 205 229 1.0E-18 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS11910 b5a2a178dd62680e1da456392bd8a917 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 1.0E-18 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS11910 b5a2a178dd62680e1da456392bd8a917 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 174 195 1.0E-18 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS11910 b5a2a178dd62680e1da456392bd8a917 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 1.0E-18 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS11910 b5a2a178dd62680e1da456392bd8a917 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.0E-18 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS11910 b5a2a178dd62680e1da456392bd8a917 253 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 09-03-2017 IPR020583 Inositol monophosphatase, metal-binding site NA29_RS11910 b5a2a178dd62680e1da456392bd8a917 253 Gene3D G3DSA:3.30.540.10 4 141 3.3E-37 T 09-03-2017 NA29_RS21240 719f67c4ca02e7c229d518ac9a153fe9 317 Gene3D G3DSA:3.40.190.10 191 258 2.6E-13 T 09-03-2017 NA29_RS21240 719f67c4ca02e7c229d518ac9a153fe9 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21240 719f67c4ca02e7c229d518ac9a153fe9 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21240 719f67c4ca02e7c229d518ac9a153fe9 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21240 719f67c4ca02e7c229d518ac9a153fe9 317 Gene3D G3DSA:1.10.10.10 1 84 2.0E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21240 719f67c4ca02e7c229d518ac9a153fe9 317 SUPERFAMILY SSF53850 85 290 5.02E-35 T 09-03-2017 NA29_RS21240 719f67c4ca02e7c229d518ac9a153fe9 317 SUPERFAMILY SSF46785 1 84 5.92E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21240 719f67c4ca02e7c229d518ac9a153fe9 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.5E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21240 719f67c4ca02e7c229d518ac9a153fe9 317 Pfam PF03466 LysR substrate binding domain 88 287 1.5E-35 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS21240 719f67c4ca02e7c229d518ac9a153fe9 317 Gene3D G3DSA:3.40.190.10 90 190 3.8E-22 T 09-03-2017 NA29_RS11005 140fb509655a87c3c140188f9b269474 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 50.248 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NA29_RS11005 140fb509655a87c3c140188f9b269474 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 140 7.0E-35 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NA29_RS11005 140fb509655a87c3c140188f9b269474 148 PIRSF PIRSF001399 1 146 1.0E-47 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NA29_RS11005 140fb509655a87c3c140188f9b269474 148 Pfam PF01220 Dehydroquinase class II 4 140 1.1E-42 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NA29_RS11005 140fb509655a87c3c140188f9b269474 148 Gene3D G3DSA:3.40.50.9100 4 142 6.8E-48 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NA29_RS11005 140fb509655a87c3c140188f9b269474 148 SUPERFAMILY SSF52304 4 145 2.88E-47 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NA29_RS22025 4a5ce2c01a35bb5b367f9f68bd660715 521 Gene3D G3DSA:3.40.140.20 368 511 4.1E-56 T 09-03-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 NA29_RS22025 4a5ce2c01a35bb5b367f9f68bd660715 521 PIRSF PIRSF000414 1 521 1.1E-219 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 NA29_RS22025 4a5ce2c01a35bb5b367f9f68bd660715 521 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 521 44.941 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 NA29_RS22025 4a5ce2c01a35bb5b367f9f68bd660715 521 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 521 1.1E-224 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 NA29_RS22025 4a5ce2c01a35bb5b367f9f68bd660715 521 Gene3D G3DSA:3.40.140.20 247 363 3.4E-49 T 09-03-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 NA29_RS22025 4a5ce2c01a35bb5b367f9f68bd660715 521 Gene3D G3DSA:3.40.50.1380 1 187 5.6E-87 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain NA29_RS22025 4a5ce2c01a35bb5b367f9f68bd660715 521 SMART SM00798 134 453 2.6E-209 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 NA29_RS22025 4a5ce2c01a35bb5b367f9f68bd660715 521 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 451 3.4E-120 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 NA29_RS22025 4a5ce2c01a35bb5b367f9f68bd660715 521 SUPERFAMILY SSF53927 214 521 1.81E-126 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 NA29_RS22025 4a5ce2c01a35bb5b367f9f68bd660715 521 Pfam PF02142 MGS-like domain 14 129 4.0E-29 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain NA29_RS22025 4a5ce2c01a35bb5b367f9f68bd660715 521 SUPERFAMILY SSF52335 2 193 4.58E-73 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain NA29_RS22025 4a5ce2c01a35bb5b367f9f68bd660715 521 SMART SM00851 14 129 4.9E-65 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain NA29_RS19830 5078a75e471974e8117875f3e2e4729b 394 Gene3D G3DSA:3.40.640.10 50 293 2.7E-81 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS19830 5078a75e471974e8117875f3e2e4729b 394 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 3 391 41.145 T 09-03-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 NA29_RS19830 5078a75e471974e8117875f3e2e4729b 394 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 215 252 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS19830 5078a75e471974e8117875f3e2e4729b 394 Pfam PF00202 Aminotransferase class-III 14 388 2.4E-101 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS19830 5078a75e471974e8117875f3e2e4729b 394 SUPERFAMILY SSF53383 9 390 1.2E-113 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS19830 5078a75e471974e8117875f3e2e4729b 394 Gene3D G3DSA:3.90.1150.10 298 392 7.9E-27 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS19830 5078a75e471974e8117875f3e2e4729b 394 Gene3D G3DSA:3.90.1150.10 6 49 7.9E-27 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS06530 4d19271c03a763fe259a5bf70c01486f 950 Pfam PF03797 Autotransporter beta-domain 676 930 1.6E-30 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS06530 4d19271c03a763fe259a5bf70c01486f 950 SUPERFAMILY SSF103515 625 950 1.57E-45 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS06530 4d19271c03a763fe259a5bf70c01486f 950 SMART SM00869 672 940 1.0E-29 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS06530 4d19271c03a763fe259a5bf70c01486f 950 Gene3D G3DSA:2.40.128.130 640 950 1.4E-39 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS07240 4a556f67e822fbf6338b62038b9fa2cb 253 SMART SM00895 92 216 4.6E-21 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS07240 4a556f67e822fbf6338b62038b9fa2cb 253 Pfam PF07729 FCD domain 92 214 2.5E-25 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS07240 4a556f67e822fbf6338b62038b9fa2cb 253 SMART SM00345 12 71 4.6E-19 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS07240 4a556f67e822fbf6338b62038b9fa2cb 253 SUPERFAMILY SSF46785 7 75 2.8E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07240 4a556f67e822fbf6338b62038b9fa2cb 253 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 5.0E-18 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS07240 4a556f67e822fbf6338b62038b9fa2cb 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 7.9E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS07240 4a556f67e822fbf6338b62038b9fa2cb 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 7.9E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS07240 4a556f67e822fbf6338b62038b9fa2cb 253 Gene3D G3DSA:1.10.10.10 4 74 9.9E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07240 4a556f67e822fbf6338b62038b9fa2cb 253 SUPERFAMILY SSF48008 90 220 6.02E-27 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS07240 4a556f67e822fbf6338b62038b9fa2cb 253 Gene3D G3DSA:1.20.120.530 89 220 6.3E-28 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS04230 5a008e5b81d5d0c57b76ac645fe10ed9 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 4.1E-46 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 NA29_RS04230 5a008e5b81d5d0c57b76ac645fe10ed9 249 PIRSF PIRSF000090 1 249 3.3E-85 T 09-03-2017 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105 NA29_RS04230 5a008e5b81d5d0c57b76ac645fe10ed9 249 SUPERFAMILY SSF52402 1 242 8.37E-87 T 09-03-2017 NA29_RS04230 5a008e5b81d5d0c57b76ac645fe10ed9 249 SMART SM00893 23 211 4.8E-69 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 NA29_RS04230 5a008e5b81d5d0c57b76ac645fe10ed9 249 Gene3D G3DSA:3.40.50.620 1 247 1.7E-105 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS04230 5a008e5b81d5d0c57b76ac645fe10ed9 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 09-03-2017 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105 NA29_RS08165 7e3a94b1d98e347797c53a39f28fa7d0 383 PRINTS PR00143 Citrate synthase signature 184 199 1.9E-35 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS08165 7e3a94b1d98e347797c53a39f28fa7d0 383 PRINTS PR00143 Citrate synthase signature 336 350 1.9E-35 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS08165 7e3a94b1d98e347797c53a39f28fa7d0 383 PRINTS PR00143 Citrate synthase signature 134 147 1.9E-35 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS08165 7e3a94b1d98e347797c53a39f28fa7d0 383 PRINTS PR00143 Citrate synthase signature 316 332 1.9E-35 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS08165 7e3a94b1d98e347797c53a39f28fa7d0 383 PRINTS PR00143 Citrate synthase signature 206 234 1.9E-35 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS08165 7e3a94b1d98e347797c53a39f28fa7d0 383 PRINTS PR00143 Citrate synthase signature 259 279 1.9E-35 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS08165 7e3a94b1d98e347797c53a39f28fa7d0 383 Gene3D G3DSA:1.10.580.10 22 245 7.3E-75 T 09-03-2017 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 NA29_RS08165 7e3a94b1d98e347797c53a39f28fa7d0 383 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 16 383 4.7E-157 T 09-03-2017 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 NA29_RS08165 7e3a94b1d98e347797c53a39f28fa7d0 383 Pfam PF00285 Citrate synthase, C-terminal domain 17 365 3.3E-113 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS08165 7e3a94b1d98e347797c53a39f28fa7d0 383 PIRSF PIRSF001369 10 383 1.3E-112 T 09-03-2017 IPR024176 Citrate synthase, bacterial-type NA29_RS08165 7e3a94b1d98e347797c53a39f28fa7d0 383 ProSitePatterns PS00480 Citrate synthase signature. 266 278 - T 09-03-2017 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 NA29_RS08165 7e3a94b1d98e347797c53a39f28fa7d0 383 SUPERFAMILY SSF48256 16 383 3.66E-125 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS08165 7e3a94b1d98e347797c53a39f28fa7d0 383 Gene3D G3DSA:1.10.230.10 246 330 1.1E-29 T 09-03-2017 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SUPERFAMILY SSF81296 408 490 1.02E-11 T 09-03-2017 IPR014756 Immunoglobulin E-set NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SUPERFAMILY SSF81296 321 397 7.94E-14 T 09-03-2017 IPR014756 Immunoglobulin E-set NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Pfam PF03797 Autotransporter beta-domain 1612 1868 1.5E-42 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SUPERFAMILY SSF49313 1023 1102 6.12E-5 T 09-03-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Pfam PF01833 IPT/TIG domain 662 743 7.2E-14 T 09-03-2017 IPR002909 IPT domain GO:0005515 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Pfam PF01833 IPT/TIG domain 493 573 9.1E-9 T 09-03-2017 IPR002909 IPT domain GO:0005515 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Pfam PF01833 IPT/TIG domain 237 318 1.5E-12 T 09-03-2017 IPR002909 IPT domain GO:0005515 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Pfam PF01833 IPT/TIG domain 577 658 4.7E-13 T 09-03-2017 IPR002909 IPT domain GO:0005515 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Pfam PF01833 IPT/TIG domain 153 232 3.0E-11 T 09-03-2017 IPR002909 IPT domain GO:0005515 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Pfam PF01833 IPT/TIG domain 322 392 1.7E-9 T 09-03-2017 IPR002909 IPT domain GO:0005515 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Pfam PF01833 IPT/TIG domain 409 489 3.0E-9 T 09-03-2017 IPR002909 IPT domain GO:0005515 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Pfam PF01833 IPT/TIG domain 747 829 8.7E-12 T 09-03-2017 IPR002909 IPT domain GO:0005515 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Pfam PF05345 Putative Ig domain 955 995 2.8E-6 T 09-03-2017 IPR008009 Putative Ig NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Pfam PF05345 Putative Ig domain 1135 1172 2.3E-5 T 09-03-2017 IPR008009 Putative Ig NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Pfam PF05345 Putative Ig domain 1225 1266 5.2E-11 T 09-03-2017 IPR008009 Putative Ig NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Pfam PF05345 Putative Ig domain 1047 1088 1.0E-7 T 09-03-2017 IPR008009 Putative Ig NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SUPERFAMILY SSF49313 1193 1282 3.93E-9 T 09-03-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SMART SM00869 1614 1878 1.3E-36 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SUPERFAMILY SSF81296 576 648 2.36E-14 T 09-03-2017 IPR014756 Immunoglobulin E-set NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SUPERFAMILY SSF81296 661 744 2.45E-15 T 09-03-2017 IPR014756 Immunoglobulin E-set NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SMART SM00429 492 574 9.1E-9 T 09-03-2017 IPR002909 IPT domain GO:0005515 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SMART SM00429 321 406 0.001 T 09-03-2017 IPR002909 IPT domain GO:0005515 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SMART SM00429 152 234 1.2 T 09-03-2017 IPR002909 IPT domain GO:0005515 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SMART SM00429 236 319 1.0E-6 T 09-03-2017 IPR002909 IPT domain GO:0005515 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SMART SM00429 576 659 5.9E-7 T 09-03-2017 IPR002909 IPT domain GO:0005515 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SMART SM00429 661 744 5.3E-7 T 09-03-2017 IPR002909 IPT domain GO:0005515 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SMART SM00429 746 830 5.7E-10 T 09-03-2017 IPR002909 IPT domain GO:0005515 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SMART SM00429 408 490 3.6E-4 T 09-03-2017 IPR002909 IPT domain GO:0005515 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SUPERFAMILY SSF81296 492 565 1.31E-10 T 09-03-2017 IPR014756 Immunoglobulin E-set NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SUPERFAMILY SSF81296 745 821 2.36E-14 T 09-03-2017 IPR014756 Immunoglobulin E-set NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Gene3D G3DSA:2.40.128.130 1613 1887 1.8E-40 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SUPERFAMILY SSF49313 925 1013 1.02E-7 T 09-03-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SUPERFAMILY SSF81296 153 234 3.73E-14 T 09-03-2017 IPR014756 Immunoglobulin E-set NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Gene3D G3DSA:2.60.40.10 1221 1283 7.0E-7 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Gene3D G3DSA:2.60.40.10 924 1011 4.9E-5 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Gene3D G3DSA:2.60.40.10 320 396 4.7E-16 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Gene3D G3DSA:2.60.40.10 746 823 3.6E-16 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Gene3D G3DSA:2.60.40.10 408 490 1.2E-14 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Gene3D G3DSA:2.60.40.10 577 648 1.2E-16 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Gene3D G3DSA:2.60.40.10 153 233 5.6E-15 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Gene3D G3DSA:2.60.40.10 237 314 6.4E-19 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Gene3D G3DSA:2.60.40.10 492 567 2.2E-12 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 Gene3D G3DSA:2.60.40.10 661 743 1.3E-17 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SUPERFAMILY SSF49313 1108 1191 9.42E-5 T 09-03-2017 IPR015919 Cadherin-like GO:0005509|GO:0016020 NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SUPERFAMILY SSF103515 1610 1885 9.02E-43 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS19095 2953ed6a74f69408098fc77098a5a5b4 1888 SUPERFAMILY SSF81296 235 318 1.2E-15 T 09-03-2017 IPR014756 Immunoglobulin E-set NA29_RS13395 060b9e985740c7f8a1f2c5283d1de0a6 315 Gene3D G3DSA:1.10.10.10 4 85 9.7E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13395 060b9e985740c7f8a1f2c5283d1de0a6 315 SUPERFAMILY SSF46785 3 111 3.92E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13395 060b9e985740c7f8a1f2c5283d1de0a6 315 Gene3D G3DSA:3.40.190.10 173 259 6.3E-23 T 09-03-2017 NA29_RS13395 060b9e985740c7f8a1f2c5283d1de0a6 315 Pfam PF03466 LysR substrate binding domain 90 292 3.0E-48 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS13395 060b9e985740c7f8a1f2c5283d1de0a6 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.4E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13395 060b9e985740c7f8a1f2c5283d1de0a6 315 Gene3D G3DSA:3.40.190.10 90 172 2.2E-7 T 09-03-2017 NA29_RS13395 060b9e985740c7f8a1f2c5283d1de0a6 315 SUPERFAMILY SSF53850 91 296 1.3E-52 T 09-03-2017 NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 Gene3D G3DSA:3.40.50.880 157 377 2.4E-79 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 5.9E-39 T 09-03-2017 NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 5.9E-39 T 09-03-2017 NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 5.9E-39 T 09-03-2017 NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 5.9E-39 T 09-03-2017 NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 5.9E-39 T 09-03-2017 NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 SUPERFAMILY SSF52021 7 145 5.75E-56 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 SUPERFAMILY SSF52317 156 377 5.04E-63 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 6 378 48.304 T 09-03-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 8 135 2.5E-51 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 SMART SM01097 6 136 4.0E-88 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 8 375 2.1E-143 T 09-03-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 8.3E-10 T 09-03-2017 NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 8.3E-10 T 09-03-2017 NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 8.3E-10 T 09-03-2017 NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 Pfam PF00117 Glutamine amidotransferase class-I 197 372 2.8E-45 T 09-03-2017 IPR017926 Glutamine amidotransferase NA29_RS07245 ff3db2d6095aff11ed6a21618a0e0106 381 Gene3D G3DSA:3.50.30.20 7 146 8.1E-60 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS00690 da83f675bd2d6e54a28710b66493485b 319 Gene3D G3DSA:3.40.190.10 92 176 2.0E-20 T 09-03-2017 NA29_RS00690 da83f675bd2d6e54a28710b66493485b 319 SUPERFAMILY SSF46785 4 87 8.7E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00690 da83f675bd2d6e54a28710b66493485b 319 SUPERFAMILY SSF53850 89 295 1.05E-43 T 09-03-2017 NA29_RS00690 da83f675bd2d6e54a28710b66493485b 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.2E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00690 da83f675bd2d6e54a28710b66493485b 319 Gene3D G3DSA:1.10.10.10 3 81 2.0E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00690 da83f675bd2d6e54a28710b66493485b 319 Pfam PF03466 LysR substrate binding domain 88 292 6.2E-44 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS00690 da83f675bd2d6e54a28710b66493485b 319 Gene3D G3DSA:3.40.190.10 177 259 1.5E-19 T 09-03-2017 NA29_RS00185 f9902e87f32544320ff7825aa1737cf0 292 Pfam PF03466 LysR substrate binding domain 88 274 1.7E-24 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS00185 f9902e87f32544320ff7825aa1737cf0 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.7E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00185 f9902e87f32544320ff7825aa1737cf0 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.7E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00185 f9902e87f32544320ff7825aa1737cf0 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.7E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00185 f9902e87f32544320ff7825aa1737cf0 292 Gene3D G3DSA:3.40.190.10 187 236 1.6E-4 T 09-03-2017 NA29_RS00185 f9902e87f32544320ff7825aa1737cf0 292 Gene3D G3DSA:3.40.190.10 86 186 7.6E-16 T 09-03-2017 NA29_RS00185 f9902e87f32544320ff7825aa1737cf0 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.3E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00185 f9902e87f32544320ff7825aa1737cf0 292 Gene3D G3DSA:1.10.10.10 2 83 6.1E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00185 f9902e87f32544320ff7825aa1737cf0 292 SUPERFAMILY SSF46785 4 112 9.19E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00185 f9902e87f32544320ff7825aa1737cf0 292 SUPERFAMILY SSF53850 87 277 7.78E-25 T 09-03-2017 NA29_RS00075 7a7b0647167c88331cd62c16012a0a6f 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 52 97 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS00075 7a7b0647167c88331cd62c16012a0a6f 277 Gene3D G3DSA:1.10.10.60 55 107 1.6E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS00075 7a7b0647167c88331cd62c16012a0a6f 277 Pfam PF06445 GyrI-like small molecule binding domain 127 275 1.3E-26 T 09-03-2017 IPR029442 GyrI-like small molecule binding domain NA29_RS00075 7a7b0647167c88331cd62c16012a0a6f 277 Gene3D G3DSA:1.10.10.60 4 54 8.5E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS00075 7a7b0647167c88331cd62c16012a0a6f 277 Gene3D G3DSA:3.20.80.10 127 275 3.7E-29 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain NA29_RS00075 7a7b0647167c88331cd62c16012a0a6f 277 SUPERFAMILY SSF46689 54 105 2.15E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS00075 7a7b0647167c88331cd62c16012a0a6f 277 SMART SM00342 18 101 1.9E-19 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS00075 7a7b0647167c88331cd62c16012a0a6f 277 SUPERFAMILY SSF55136 127 275 1.26E-30 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain NA29_RS00075 7a7b0647167c88331cd62c16012a0a6f 277 Pfam PF12833 Helix-turn-helix domain 25 103 3.0E-17 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS00075 7a7b0647167c88331cd62c16012a0a6f 277 SMART SM00871 126 276 1.4E-26 T 09-03-2017 IPR010499 Bacterial transcription activator, effector binding NA29_RS10060 ebc1b310591a0acab8c99d38e8a02a31 241 SUPERFAMILY SSF46894 139 237 3.12E-29 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS10060 ebc1b310591a0acab8c99d38e8a02a31 241 Pfam PF00072 Response regulator receiver domain 9 118 4.3E-31 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS10060 ebc1b310591a0acab8c99d38e8a02a31 241 SMART SM00448 7 118 2.8E-44 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS10060 ebc1b310591a0acab8c99d38e8a02a31 241 SUPERFAMILY SSF52172 4 126 3.42E-42 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS10060 ebc1b310591a0acab8c99d38e8a02a31 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 235 9.0E-24 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS10060 ebc1b310591a0acab8c99d38e8a02a31 241 Gene3D G3DSA:1.10.10.10 137 237 7.3E-33 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10060 ebc1b310591a0acab8c99d38e8a02a31 241 Gene3D G3DSA:3.40.50.2300 3 126 4.0E-41 T 09-03-2017 NA29_RS10060 ebc1b310591a0acab8c99d38e8a02a31 241 SMART SM00862 159 235 4.7E-26 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS22625 9e5ca937c073abc80f43666524d99677 454 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 2 448 4.6E-119 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NA29_RS22625 9e5ca937c073abc80f43666524d99677 454 Pfam PF02321 Outer membrane efflux protein 49 236 6.5E-26 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS22625 9e5ca937c073abc80f43666524d99677 454 Pfam PF02321 Outer membrane efflux protein 264 446 5.9E-29 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS22625 9e5ca937c073abc80f43666524d99677 454 SUPERFAMILY SSF56954 37 448 1.83E-110 T 09-03-2017 NA29_RS22625 9e5ca937c073abc80f43666524d99677 454 Gene3D G3DSA:1.20.1600.10 124 297 4.2E-100 T 09-03-2017 NA29_RS22625 9e5ca937c073abc80f43666524d99677 454 Gene3D G3DSA:1.20.1600.10 335 448 4.2E-100 T 09-03-2017 NA29_RS22625 9e5ca937c073abc80f43666524d99677 454 Gene3D G3DSA:1.20.1600.10 35 72 4.2E-100 T 09-03-2017 NA29_RS22625 9e5ca937c073abc80f43666524d99677 454 Gene3D G3DSA:2.20.200.10 298 333 1.7E-25 T 09-03-2017 NA29_RS22625 9e5ca937c073abc80f43666524d99677 454 Gene3D G3DSA:2.20.200.10 82 123 1.7E-25 T 09-03-2017 NA29_RS23735 dda8016cf460e3bb9d316beeedeed9b3 130 Pfam PF01196 Ribosomal protein L17 20 115 5.0E-35 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23735 dda8016cf460e3bb9d316beeedeed9b3 130 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.962 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23735 dda8016cf460e3bb9d316beeedeed9b3 130 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23735 dda8016cf460e3bb9d316beeedeed9b3 130 SUPERFAMILY SSF64263 1 119 6.02E-51 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23735 dda8016cf460e3bb9d316beeedeed9b3 130 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 9.0E-46 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23735 dda8016cf460e3bb9d316beeedeed9b3 130 Gene3D G3DSA:3.90.1030.10 1 117 2.7E-50 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS13430 321b5291af815dee1654c8cc8db2a29b 299 Gene3D G3DSA:1.10.10.60 244 281 3.3E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS13430 321b5291af815dee1654c8cc8db2a29b 299 Pfam PF02311 AraC-like ligand binding domain 56 177 4.3E-10 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS13430 321b5291af815dee1654c8cc8db2a29b 299 SUPERFAMILY SSF46689 243 281 4.18E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS13430 321b5291af815dee1654c8cc8db2a29b 299 Gene3D G3DSA:1.10.10.60 179 236 1.1E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS13430 321b5291af815dee1654c8cc8db2a29b 299 Pfam PF12833 Helix-turn-helix domain 206 282 6.2E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS13430 321b5291af815dee1654c8cc8db2a29b 299 SUPERFAMILY SSF51182 39 226 1.73E-16 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS13430 321b5291af815dee1654c8cc8db2a29b 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 282 1.3E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS13430 321b5291af815dee1654c8cc8db2a29b 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 266 1.3E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS13430 321b5291af815dee1654c8cc8db2a29b 299 Gene3D G3DSA:2.60.120.10 55 118 6.6E-9 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS13430 321b5291af815dee1654c8cc8db2a29b 299 SMART SM00342 200 282 5.1E-23 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS04130 b155762474aa6cc0ee1f019b4e4eea75 376 SUPERFAMILY SSF53383 12 372 2.3E-74 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS04130 b155762474aa6cc0ee1f019b4e4eea75 376 PIRSF PIRSF000524 18 376 3.2E-39 T 09-03-2017 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 NA29_RS04130 b155762474aa6cc0ee1f019b4e4eea75 376 Gene3D G3DSA:3.40.640.10 21 266 3.1E-48 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS04130 b155762474aa6cc0ee1f019b4e4eea75 376 Gene3D G3DSA:3.90.1150.10 267 373 2.9E-8 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS04130 b155762474aa6cc0ee1f019b4e4eea75 376 Pfam PF00266 Aminotransferase class-V 21 294 7.7E-12 T 09-03-2017 IPR000192 Aminotransferase class V domain NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 ProSitePatterns PS01244 Aconitase family signature 2. 494 507 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 Gene3D G3DSA:3.30.499.10 367 576 1.7E-62 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 Gene3D G3DSA:3.30.499.10 22 246 2.0E-76 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 899 0.0 T 09-03-2017 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 Gene3D G3DSA:3.40.1060.10 247 365 3.1E-35 T 09-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 PRINTS PR00415 Aconitase family signature 147 160 1.4E-40 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 PRINTS PR00415 Aconitase family signature 276 289 1.4E-40 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 PRINTS PR00415 Aconitase family signature 171 179 1.4E-40 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 PRINTS PR00415 Aconitase family signature 494 507 1.4E-40 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 PRINTS PR00415 Aconitase family signature 214 229 1.4E-40 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 PRINTS PR00415 Aconitase family signature 290 303 1.4E-40 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 PRINTS PR00415 Aconitase family signature 200 213 1.4E-40 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 PRINTS PR00415 Aconitase family signature 370 384 1.4E-40 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 PRINTS PR00415 Aconitase family signature 432 443 1.4E-40 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 Pfam PF00330 Aconitase family (aconitate hydratase) 70 563 8.7E-178 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 Pfam PF00694 Aconitase C-terminal domain 694 825 1.4E-40 T 09-03-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 ProSitePatterns PS00450 Aconitase family signature 1. 428 444 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 SUPERFAMILY SSF53732 19 625 2.09E-214 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 Gene3D G3DSA:3.20.19.10 637 899 1.4E-80 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS14870 dea7cc3417c84e2c0ea46acf1cd9a91f 902 SUPERFAMILY SSF52016 636 899 4.32E-80 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS09130 47ce8059ba7e4c1379864a896b421f8f 197 SUPERFAMILY SSF88946 13 92 3.45E-15 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS09130 47ce8059ba7e4c1379864a896b421f8f 197 SUPERFAMILY SSF88659 118 185 7.29E-12 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS09130 47ce8059ba7e4c1379864a896b421f8f 197 TIGRFAM TIGR02943 Sig70_famx1: RNA polymerase sigma-70 factor, TIGR02943 family 7 191 2.8E-75 T 09-03-2017 IPR014289 RNA polymerase sigma-24-related NA29_RS09130 47ce8059ba7e4c1379864a896b421f8f 197 Gene3D G3DSA:1.10.1740.10 14 98 3.8E-16 T 09-03-2017 NA29_RS09130 47ce8059ba7e4c1379864a896b421f8f 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 185 8.0E-20 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS09130 47ce8059ba7e4c1379864a896b421f8f 197 Pfam PF08281 Sigma-70, region 4 132 181 6.7E-9 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS09130 47ce8059ba7e4c1379864a896b421f8f 197 Gene3D G3DSA:1.10.10.10 124 186 1.9E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS09130 47ce8059ba7e4c1379864a896b421f8f 197 Pfam PF04542 Sigma-70 region 2 14 79 7.6E-9 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS23850 f660a9b713447fc4aa37773bafcf5d6d 91 Gene3D G3DSA:3.30.860.10 1 90 1.4E-41 T 09-03-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23850 f660a9b713447fc4aa37773bafcf5d6d 91 PIRSF PIRSF002144 1 91 6.9E-33 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23850 f660a9b713447fc4aa37773bafcf5d6d 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.713 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23850 f660a9b713447fc4aa37773bafcf5d6d 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.8E-45 T 09-03-2017 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 NA29_RS23850 f660a9b713447fc4aa37773bafcf5d6d 91 Pfam PF00203 Ribosomal protein S19 3 83 2.7E-37 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23850 f660a9b713447fc4aa37773bafcf5d6d 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 09-03-2017 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23850 f660a9b713447fc4aa37773bafcf5d6d 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 4.3E-24 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23850 f660a9b713447fc4aa37773bafcf5d6d 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 4.3E-24 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23850 f660a9b713447fc4aa37773bafcf5d6d 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 4.3E-24 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23850 f660a9b713447fc4aa37773bafcf5d6d 91 SUPERFAMILY SSF54570 3 84 7.46E-35 T 09-03-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS13935 5e572dd1926a8d81a383deaa10929b76 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS13935 5e572dd1926a8d81a383deaa10929b76 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 250 6.6E-57 T 09-03-2017 NA29_RS13935 5e572dd1926a8d81a383deaa10929b76 251 SUPERFAMILY SSF51735 7 250 8.86E-71 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13935 5e572dd1926a8d81a383deaa10929b76 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 6.5E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13935 5e572dd1926a8d81a383deaa10929b76 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 6.5E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13935 5e572dd1926a8d81a383deaa10929b76 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.5E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13935 5e572dd1926a8d81a383deaa10929b76 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 6.5E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13935 5e572dd1926a8d81a383deaa10929b76 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 6.5E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13935 5e572dd1926a8d81a383deaa10929b76 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 6.5E-39 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13935 5e572dd1926a8d81a383deaa10929b76 251 Gene3D G3DSA:3.40.50.720 4 250 5.8E-74 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13935 5e572dd1926a8d81a383deaa10929b76 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 2.3E-10 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13935 5e572dd1926a8d81a383deaa10929b76 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.3E-10 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13935 5e572dd1926a8d81a383deaa10929b76 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.3E-10 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS01555 565ddaaa6ae9c18cc61dd9f7c4e7da57 609 Pfam PF13522 Glutamine amidotransferase domain 62 194 3.3E-22 T 09-03-2017 NA29_RS01555 565ddaaa6ae9c18cc61dd9f7c4e7da57 609 Pfam PF01380 SIS domain 288 415 1.1E-26 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 NA29_RS01555 565ddaaa6ae9c18cc61dd9f7c4e7da57 609 Pfam PF01380 SIS domain 462 590 5.4E-25 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 NA29_RS01555 565ddaaa6ae9c18cc61dd9f7c4e7da57 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 38.627 T 09-03-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 NA29_RS01555 565ddaaa6ae9c18cc61dd9f7c4e7da57 609 Gene3D G3DSA:3.40.50.10490 246 442 4.2E-72 T 09-03-2017 NA29_RS01555 565ddaaa6ae9c18cc61dd9f7c4e7da57 609 Gene3D G3DSA:3.40.50.10490 443 609 1.4E-63 T 09-03-2017 NA29_RS01555 565ddaaa6ae9c18cc61dd9f7c4e7da57 609 Gene3D G3DSA:3.60.20.10 2 242 3.5E-75 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS01555 565ddaaa6ae9c18cc61dd9f7c4e7da57 609 SUPERFAMILY SSF53697 247 609 4.92E-108 T 09-03-2017 NA29_RS01555 565ddaaa6ae9c18cc61dd9f7c4e7da57 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.5E-245 T 09-03-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 NA29_RS01555 565ddaaa6ae9c18cc61dd9f7c4e7da57 609 SUPERFAMILY SSF56235 2 236 5.23E-70 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS22900 1e310668d4dca8c58b1022a92e75569f 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 24.962 T 09-03-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 NA29_RS22900 1e310668d4dca8c58b1022a92e75569f 73 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 5.5E-23 T 09-03-2017 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 NA29_RS22900 1e310668d4dca8c58b1022a92e75569f 73 Gene3D G3DSA:2.40.50.140 2 72 1.3E-33 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS22900 1e310668d4dca8c58b1022a92e75569f 73 SMART SM00316 4 72 0.0017 T 09-03-2017 IPR022967 RNA-binding domain, S1 NA29_RS22900 1e310668d4dca8c58b1022a92e75569f 73 SUPERFAMILY SSF50249 1 71 2.57E-24 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS22900 1e310668d4dca8c58b1022a92e75569f 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 4.6E-30 T 09-03-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 NA29_RS15805 eead0ce394227cf11687927035aba689 427 SUPERFAMILY SSF103473 7 410 4.32E-54 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS15805 eead0ce394227cf11687927035aba689 427 Pfam PF07690 Major Facilitator Superfamily 27 332 3.5E-25 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS15805 eead0ce394227cf11687927035aba689 427 Gene3D G3DSA:1.20.1250.20 236 413 3.2E-17 T 09-03-2017 NA29_RS15805 eead0ce394227cf11687927035aba689 427 Gene3D G3DSA:1.20.1250.20 19 200 6.9E-23 T 09-03-2017 NA29_RS16385 fc347c55acc70db56508ee622a29bebf 267 Gene3D G3DSA:3.90.226.10 11 264 5.8E-72 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS16385 fc347c55acc70db56508ee622a29bebf 267 SUPERFAMILY SSF52096 10 267 8.2E-74 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS16385 fc347c55acc70db56508ee622a29bebf 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 266 1.6E-49 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS24180 50277424baa55d75e9c6fbf1bc9db577 362 SUPERFAMILY SSF63380 3 111 1.24E-22 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS24180 50277424baa55d75e9c6fbf1bc9db577 362 Gene3D G3DSA:2.40.30.10 5 99 2.4E-24 T 09-03-2017 NA29_RS24180 50277424baa55d75e9c6fbf1bc9db577 362 SUPERFAMILY SSF52343 100 248 3.54E-34 T 09-03-2017 NA29_RS24180 50277424baa55d75e9c6fbf1bc9db577 362 SUPERFAMILY SSF54292 242 357 2.69E-27 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS24180 50277424baa55d75e9c6fbf1bc9db577 362 PRINTS PR00410 Phenol hydroxylase reductase family signature 147 156 8.2E-8 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS24180 50277424baa55d75e9c6fbf1bc9db577 362 PRINTS PR00410 Phenol hydroxylase reductase family signature 218 226 8.2E-8 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS24180 50277424baa55d75e9c6fbf1bc9db577 362 PRINTS PR00410 Phenol hydroxylase reductase family signature 122 141 8.2E-8 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS24180 50277424baa55d75e9c6fbf1bc9db577 362 PRINTS PR00410 Phenol hydroxylase reductase family signature 38 50 8.2E-8 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS24180 50277424baa55d75e9c6fbf1bc9db577 362 Pfam PF00175 Oxidoreductase NAD-binding domain 125 232 7.9E-16 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NA29_RS24180 50277424baa55d75e9c6fbf1bc9db577 362 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 278 350 1.8E-12 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS24180 50277424baa55d75e9c6fbf1bc9db577 362 Gene3D G3DSA:3.40.50.80 100 244 6.9E-38 T 09-03-2017 NA29_RS24180 50277424baa55d75e9c6fbf1bc9db577 362 Pfam PF00970 Oxidoreductase FAD-binding domain 11 109 6.7E-12 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 NA29_RS24180 50277424baa55d75e9c6fbf1bc9db577 362 Gene3D G3DSA:3.10.20.30 245 361 1.7E-30 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS24180 50277424baa55d75e9c6fbf1bc9db577 362 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 6 360 9.2E-139 T 09-03-2017 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 NA29_RS19700 e230870829216680f3749038387d1ec1 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.4E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19700 e230870829216680f3749038387d1ec1 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.4E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19700 e230870829216680f3749038387d1ec1 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.4E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19700 e230870829216680f3749038387d1ec1 314 SUPERFAMILY SSF46785 9 115 3.7E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19700 e230870829216680f3749038387d1ec1 314 SUPERFAMILY SSF53850 95 298 1.21E-21 T 09-03-2017 NA29_RS19700 e230870829216680f3749038387d1ec1 314 Pfam PF03466 LysR substrate binding domain 95 295 2.1E-21 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS19700 e230870829216680f3749038387d1ec1 314 Gene3D G3DSA:1.10.10.10 9 92 2.1E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19700 e230870829216680f3749038387d1ec1 314 Gene3D G3DSA:3.40.190.10 94 200 7.0E-12 T 09-03-2017 NA29_RS19700 e230870829216680f3749038387d1ec1 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 4.7E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19700 e230870829216680f3749038387d1ec1 314 Gene3D G3DSA:3.40.190.10 201 250 7.2E-6 T 09-03-2017 NA29_RS02180 4b25db553f31e5f3cf1a787ffa8a0f01 283 Pfam PF12833 Helix-turn-helix domain 203 279 1.4E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS02180 4b25db553f31e5f3cf1a787ffa8a0f01 283 SMART SM00342 196 278 2.6E-27 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS02180 4b25db553f31e5f3cf1a787ffa8a0f01 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 233 274 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS02180 4b25db553f31e5f3cf1a787ffa8a0f01 283 Gene3D G3DSA:1.10.10.60 177 233 1.4E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS02180 4b25db553f31e5f3cf1a787ffa8a0f01 283 Gene3D G3DSA:1.10.10.60 234 279 2.7E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS02180 4b25db553f31e5f3cf1a787ffa8a0f01 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 7.6E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS02180 4b25db553f31e5f3cf1a787ffa8a0f01 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 7.6E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS02180 4b25db553f31e5f3cf1a787ffa8a0f01 283 Pfam PF02311 AraC-like ligand binding domain 39 160 1.9E-13 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS02180 4b25db553f31e5f3cf1a787ffa8a0f01 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 181 225 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS02180 4b25db553f31e5f3cf1a787ffa8a0f01 283 SUPERFAMILY SSF51215 37 164 1.83E-16 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS02180 4b25db553f31e5f3cf1a787ffa8a0f01 283 SUPERFAMILY SSF46689 233 279 8.06E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS02180 4b25db553f31e5f3cf1a787ffa8a0f01 283 Gene3D G3DSA:2.60.120.280 39 162 3.6E-9 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS02180 4b25db553f31e5f3cf1a787ffa8a0f01 283 SUPERFAMILY SSF46689 180 230 3.8E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS02070 764e1ecfe61ce7546e9a1f5aa8b9a536 360 SMART SM00849 42 272 4.3E-19 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS02070 764e1ecfe61ce7546e9a1f5aa8b9a536 360 SUPERFAMILY SSF56281 15 357 1.21E-67 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS02070 764e1ecfe61ce7546e9a1f5aa8b9a536 360 Gene3D G3DSA:3.60.15.10 16 132 1.2E-49 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS02070 764e1ecfe61ce7546e9a1f5aa8b9a536 360 Gene3D G3DSA:3.60.15.10 177 303 1.2E-49 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS02070 764e1ecfe61ce7546e9a1f5aa8b9a536 360 Pfam PF00753 Metallo-beta-lactamase superfamily 41 272 3.0E-19 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS05825 c78251907f1adce06a413eba2d549d78 260 PIRSF PIRSF039085 9 257 1.2E-113 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 NA29_RS05825 c78251907f1adce06a413eba2d549d78 260 SUPERFAMILY SSF52540 12 251 1.61E-76 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05825 c78251907f1adce06a413eba2d549d78 260 SMART SM00382 37 229 3.0E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS05825 c78251907f1adce06a413eba2d549d78 260 Gene3D G3DSA:3.40.50.300 11 254 8.6E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05825 c78251907f1adce06a413eba2d549d78 260 Pfam PF00005 ABC transporter 28 181 1.2E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS05825 c78251907f1adce06a413eba2d549d78 260 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS24045 7d213b2398f7b30a4d51c7303e41ac72 185 PRINTS PR00338 Transcription termination factor NUSG signature 143 158 6.4E-19 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 NA29_RS24045 7d213b2398f7b30a4d51c7303e41ac72 185 PRINTS PR00338 Transcription termination factor NUSG signature 161 177 6.4E-19 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 NA29_RS24045 7d213b2398f7b30a4d51c7303e41ac72 185 PRINTS PR00338 Transcription termination factor NUSG signature 65 77 6.4E-19 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 NA29_RS24045 7d213b2398f7b30a4d51c7303e41ac72 185 SMART SM00739 131 158 4.1E-5 T 09-03-2017 IPR005824 KOW NA29_RS24045 7d213b2398f7b30a4d51c7303e41ac72 185 Gene3D G3DSA:3.30.70.940 10 121 5.3E-46 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 NA29_RS24045 7d213b2398f7b30a4d51c7303e41ac72 185 SUPERFAMILY SSF50104 129 185 1.65E-19 T 09-03-2017 IPR008991 Translation protein SH3-like domain NA29_RS24045 7d213b2398f7b30a4d51c7303e41ac72 185 Gene3D G3DSA:2.30.30.30 124 185 7.2E-31 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 NA29_RS24045 7d213b2398f7b30a4d51c7303e41ac72 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 10 185 26.316 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 NA29_RS24045 7d213b2398f7b30a4d51c7303e41ac72 185 Pfam PF00467 KOW motif 134 167 3.7E-6 T 09-03-2017 IPR005824 KOW NA29_RS24045 7d213b2398f7b30a4d51c7303e41ac72 185 Pfam PF02357 Transcription termination factor nusG 11 116 9.2E-27 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 NA29_RS24045 7d213b2398f7b30a4d51c7303e41ac72 185 SUPERFAMILY SSF82679 10 121 8.37E-39 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 NA29_RS24045 7d213b2398f7b30a4d51c7303e41ac72 185 SMART SM00738 10 119 3.0E-47 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 NA29_RS24045 7d213b2398f7b30a4d51c7303e41ac72 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 168 177 - T 09-03-2017 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site NA29_RS24045 7d213b2398f7b30a4d51c7303e41ac72 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 13 185 3.0E-69 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 NA29_RS18905 d6756cedd01b10a05f18b569419d70e7 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 9.8E-20 T 09-03-2017 NA29_RS18905 d6756cedd01b10a05f18b569419d70e7 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 9.8E-20 T 09-03-2017 NA29_RS18905 d6756cedd01b10a05f18b569419d70e7 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 313 329 9.8E-20 T 09-03-2017 NA29_RS18905 d6756cedd01b10a05f18b569419d70e7 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 313 9.8E-20 T 09-03-2017 NA29_RS18905 d6756cedd01b10a05f18b569419d70e7 425 SUPERFAMILY SSF51905 5 178 3.66E-60 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18905 d6756cedd01b10a05f18b569419d70e7 425 SUPERFAMILY SSF51905 285 363 3.66E-60 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18905 d6756cedd01b10a05f18b569419d70e7 425 Pfam PF01494 FAD binding domain 5 358 2.3E-23 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 NA29_RS18905 d6756cedd01b10a05f18b569419d70e7 425 SUPERFAMILY SSF54373 183 289 4.32E-31 T 09-03-2017 NA29_RS18905 d6756cedd01b10a05f18b569419d70e7 425 Gene3D G3DSA:3.50.50.60 285 360 1.8E-38 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18905 d6756cedd01b10a05f18b569419d70e7 425 Gene3D G3DSA:3.50.50.60 5 184 1.8E-38 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17670 6665a14dfd91095f4c7b2a64beed35f2 360 Gene3D G3DSA:3.40.640.10 62 253 1.6E-39 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS17670 6665a14dfd91095f4c7b2a64beed35f2 360 Pfam PF00155 Aminotransferase class I and II 69 312 6.2E-24 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS17670 6665a14dfd91095f4c7b2a64beed35f2 360 SUPERFAMILY SSF53383 20 351 3.39E-53 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS17670 6665a14dfd91095f4c7b2a64beed35f2 360 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 22 350 2.0E-96 T 09-03-2017 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 NA29_RS17670 6665a14dfd91095f4c7b2a64beed35f2 360 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 207 220 - T 09-03-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 NA29_RS16720 5b2d8e5c9f8342ec84f7dbf3a8e12ef2 470 Pfam PF01565 FAD binding domain 42 180 7.3E-37 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NA29_RS16720 5b2d8e5c9f8342ec84f7dbf3a8e12ef2 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 221 469 1.5E-52 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 NA29_RS16720 5b2d8e5c9f8342ec84f7dbf3a8e12ef2 470 SUPERFAMILY SSF56176 5 216 5.95E-72 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS16720 5b2d8e5c9f8342ec84f7dbf3a8e12ef2 470 Gene3D G3DSA:1.10.45.10 430 469 5.2E-15 T 09-03-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 NA29_RS16720 5b2d8e5c9f8342ec84f7dbf3a8e12ef2 470 SUPERFAMILY SSF55103 193 469 8.18E-54 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NA29_RS16720 5b2d8e5c9f8342ec84f7dbf3a8e12ef2 470 Gene3D G3DSA:3.30.465.10 99 217 1.1E-33 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS16720 5b2d8e5c9f8342ec84f7dbf3a8e12ef2 470 Gene3D G3DSA:3.30.43.10 2 97 1.0E-26 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NA29_RS05750 b21e2611888f34a77e0cc8389c6ccdf4 212 Gene3D G3DSA:3.40.30.10 4 157 1.4E-60 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS05750 b21e2611888f34a77e0cc8389c6ccdf4 212 SUPERFAMILY SSF52833 3 209 1.33E-65 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS05750 b21e2611888f34a77e0cc8389c6ccdf4 212 PIRSF PIRSF000239 1 209 6.2E-76 T 09-03-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 NA29_RS05750 b21e2611888f34a77e0cc8389c6ccdf4 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 191 3.5E-8 T 09-03-2017 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 NA29_RS05750 b21e2611888f34a77e0cc8389c6ccdf4 212 Gene3D G3DSA:3.30.1020.10 158 211 2.9E-27 T 09-03-2017 NA29_RS05750 b21e2611888f34a77e0cc8389c6ccdf4 212 Pfam PF00578 AhpC/TSA family 6 135 1.3E-30 T 09-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 NA29_RS03155 d820f02474635a4a1dd1b7cce342ee98 217 Pfam PF13609 Gram-negative porin 76 181 5.8E-10 T 09-03-2017 NA29_RS03155 d820f02474635a4a1dd1b7cce342ee98 217 SUPERFAMILY SSF56935 18 217 4.19E-28 T 09-03-2017 NA29_RS03155 d820f02474635a4a1dd1b7cce342ee98 217 Gene3D G3DSA:2.40.160.10 19 217 5.1E-31 T 09-03-2017 IPR023614 Porin domain NA29_RS17830 183e581b30cc2e80023c5f26318a47fd 440 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 440 32.209 T 09-03-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 NA29_RS17830 183e581b30cc2e80023c5f26318a47fd 440 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 12 433 5.5E-125 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 NA29_RS17830 183e581b30cc2e80023c5f26318a47fd 440 Gene3D G3DSA:3.65.10.10 250 436 1.5E-68 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 NA29_RS17830 183e581b30cc2e80023c5f26318a47fd 440 ProSitePatterns PS00885 EPSP synthase signature 2. 352 370 - T 09-03-2017 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 NA29_RS17830 183e581b30cc2e80023c5f26318a47fd 440 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 438 1.2E-130 T 09-03-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 NA29_RS17830 183e581b30cc2e80023c5f26318a47fd 440 Gene3D G3DSA:3.65.10.10 22 249 1.7E-66 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 NA29_RS17830 183e581b30cc2e80023c5f26318a47fd 440 ProSitePatterns PS00104 EPSP synthase signature 1. 89 103 - T 09-03-2017 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 NA29_RS17830 183e581b30cc2e80023c5f26318a47fd 440 SUPERFAMILY SSF55205 1 437 7.19E-121 T 09-03-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 NA29_RS17830 183e581b30cc2e80023c5f26318a47fd 440 PIRSF PIRSF000505 5 440 4.3E-136 T 09-03-2017 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 NA29_RS16670 0c6893fec1bc48a0c8371ae5edc0950f 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 330 2.6E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS16670 0c6893fec1bc48a0c8371ae5edc0950f 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 314 2.6E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS16670 0c6893fec1bc48a0c8371ae5edc0950f 336 SUPERFAMILY SSF46689 283 332 5.38E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS16670 0c6893fec1bc48a0c8371ae5edc0950f 336 Pfam PF12833 Helix-turn-helix domain 254 332 8.6E-18 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS16670 0c6893fec1bc48a0c8371ae5edc0950f 336 Gene3D G3DSA:1.10.10.60 282 332 1.8E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS16670 0c6893fec1bc48a0c8371ae5edc0950f 336 SMART SM00342 247 330 1.8E-19 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS16670 0c6893fec1bc48a0c8371ae5edc0950f 336 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 22 204 1.9E-43 T 09-03-2017 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal NA29_RS08700 56e763c85e90d8ebfd900a5ffd16c669 236 Pfam PF12833 Helix-turn-helix domain 161 235 3.3E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS08700 56e763c85e90d8ebfd900a5ffd16c669 236 Gene3D G3DSA:1.10.10.60 134 190 3.9E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08700 56e763c85e90d8ebfd900a5ffd16c669 236 SUPERFAMILY SSF51182 3 162 2.37E-13 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS08700 56e763c85e90d8ebfd900a5ffd16c669 236 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 190 231 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS08700 56e763c85e90d8ebfd900a5ffd16c669 236 SUPERFAMILY SSF46689 189 234 4.39E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08700 56e763c85e90d8ebfd900a5ffd16c669 236 Gene3D G3DSA:1.10.10.60 191 234 3.6E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08700 56e763c85e90d8ebfd900a5ffd16c669 236 SMART SM00342 153 235 6.3E-19 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS08700 56e763c85e90d8ebfd900a5ffd16c669 236 Gene3D G3DSA:2.60.120.10 3 61 1.2E-7 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS16395 f9a3fdcd623dd8d075702e6cce634a3f 226 Gene3D G3DSA:1.10.10.10 8 79 2.3E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16395 f9a3fdcd623dd8d075702e6cce634a3f 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 79 2.2E-18 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16395 f9a3fdcd623dd8d075702e6cce634a3f 226 SUPERFAMILY SSF46785 11 104 2.84E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16395 f9a3fdcd623dd8d075702e6cce634a3f 226 SMART SM00345 21 79 1.6E-17 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16395 f9a3fdcd623dd8d075702e6cce634a3f 226 SMART SM00895 89 213 3.6E-19 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS16395 f9a3fdcd623dd8d075702e6cce634a3f 226 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 5.0E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16395 f9a3fdcd623dd8d075702e6cce634a3f 226 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 5.0E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16395 f9a3fdcd623dd8d075702e6cce634a3f 226 SUPERFAMILY SSF48008 85 218 7.06E-25 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS16395 f9a3fdcd623dd8d075702e6cce634a3f 226 Pfam PF07729 FCD domain 89 212 4.9E-28 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS16395 f9a3fdcd623dd8d075702e6cce634a3f 226 Gene3D G3DSA:1.20.120.530 82 220 4.0E-27 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS00385 b7a376cd3835b21981b3e19e4091065e 726 Hamap MF_00641 Malate synthase G [glcB]. 1 726 400.136 T 09-03-2017 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS00385 b7a376cd3835b21981b3e19e4091065e 726 Gene3D G3DSA:1.20.1220.12 591 724 1.9E-74 T 09-03-2017 NA29_RS00385 b7a376cd3835b21981b3e19e4091065e 726 SUPERFAMILY SSF51645 4 723 2.88E-300 T 09-03-2017 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS00385 b7a376cd3835b21981b3e19e4091065e 726 Gene3D G3DSA:2.170.170.11 297 334 1.6E-69 T 09-03-2017 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS00385 b7a376cd3835b21981b3e19e4091065e 726 Gene3D G3DSA:2.170.170.11 136 263 1.6E-69 T 09-03-2017 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS00385 b7a376cd3835b21981b3e19e4091065e 726 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 6 723 0.0 T 09-03-2017 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS00385 b7a376cd3835b21981b3e19e4091065e 726 Pfam PF01274 Malate synthase 18 698 5.5E-183 T 09-03-2017 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS00385 b7a376cd3835b21981b3e19e4091065e 726 Gene3D G3DSA:3.20.20.360 265 295 1.2E-144 T 09-03-2017 NA29_RS00385 b7a376cd3835b21981b3e19e4091065e 726 Gene3D G3DSA:3.20.20.360 89 135 1.2E-144 T 09-03-2017 NA29_RS00385 b7a376cd3835b21981b3e19e4091065e 726 Gene3D G3DSA:3.20.20.360 335 589 1.2E-144 T 09-03-2017 NA29_RS00385 b7a376cd3835b21981b3e19e4091065e 726 Gene3D G3DSA:1.10.1860.10 1 88 3.9E-35 T 09-03-2017 NA29_RS22645 a8572c266302e560d4f381473f5e16f8 768 SUPERFAMILY SSF53474 39 363 2.15E-24 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS22645 a8572c266302e560d4f381473f5e16f8 768 Gene3D G3DSA:3.40.50.1820 120 329 6.0E-6 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS22645 a8572c266302e560d4f381473f5e16f8 768 Pfam PF11339 Protein of unknown function (DUF3141) 10 583 5.0E-287 T 09-03-2017 IPR024501 Protein of unknown function DUF3141 NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 SUPERFAMILY SSF52016 600 858 2.55E-67 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 SUPERFAMILY SSF53732 16 588 7.85E-186 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 PRINTS PR00415 Aconitase family signature 192 205 9.9E-30 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 PRINTS PR00415 Aconitase family signature 268 281 9.9E-30 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 PRINTS PR00415 Aconitase family signature 361 375 9.9E-30 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 PRINTS PR00415 Aconitase family signature 282 295 9.9E-30 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 PRINTS PR00415 Aconitase family signature 163 171 9.9E-30 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 PRINTS PR00415 Aconitase family signature 206 221 9.9E-30 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 PRINTS PR00415 Aconitase family signature 465 478 9.9E-30 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 PRINTS PR00415 Aconitase family signature 403 414 9.9E-30 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 PRINTS PR00415 Aconitase family signature 139 152 9.9E-30 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 Gene3D G3DSA:3.20.19.10 607 858 3.6E-65 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 Gene3D G3DSA:3.30.499.10 361 546 1.6E-54 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 Gene3D G3DSA:3.30.499.10 23 227 4.8E-63 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 3 860 0.0 T 09-03-2017 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 Gene3D G3DSA:3.40.1060.10 228 360 3.3E-33 T 09-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 Pfam PF00694 Aconitase C-terminal domain 658 788 3.9E-29 T 09-03-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08170 11cec52019b0f55af4dc39ae5e7884c4 866 Pfam PF00330 Aconitase family (aconitate hydratase) 71 534 3.4E-148 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS23405 03e40f1ca29562fe32ba15cf636950f6 204 Gene3D G3DSA:2.102.10.10 18 201 1.5E-38 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS23405 03e40f1ca29562fe32ba15cf636950f6 204 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 7 42 8.0E-10 T 09-03-2017 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 NA29_RS23405 03e40f1ca29562fe32ba15cf636950f6 204 PRINTS PR00162 Rieske 2Fe-2S subunit signature 126 137 2.2E-9 T 09-03-2017 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 NA29_RS23405 03e40f1ca29562fe32ba15cf636950f6 204 PRINTS PR00162 Rieske 2Fe-2S subunit signature 169 181 2.2E-9 T 09-03-2017 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 NA29_RS23405 03e40f1ca29562fe32ba15cf636950f6 204 PRINTS PR00162 Rieske 2Fe-2S subunit signature 156 168 2.2E-9 T 09-03-2017 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 NA29_RS23405 03e40f1ca29562fe32ba15cf636950f6 204 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 12 197 8.4E-61 T 09-03-2017 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 NA29_RS23405 03e40f1ca29562fe32ba15cf636950f6 204 Pfam PF00355 Rieske [2Fe-2S] domain 118 182 2.2E-11 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS23405 03e40f1ca29562fe32ba15cf636950f6 204 SUPERFAMILY SSF50022 33 198 4.19E-35 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS17355 0b11ad13c2994ffab92dacaaff4add8f 219 Gene3D G3DSA:3.50.30.40 14 176 3.7E-47 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NA29_RS17355 0b11ad13c2994ffab92dacaaff4add8f 219 Pfam PF03737 Demethylmenaquinone methyltransferase 16 169 1.1E-36 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NA29_RS17355 0b11ad13c2994ffab92dacaaff4add8f 219 SUPERFAMILY SSF89562 14 180 5.36E-46 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NA29_RS17735 867bae36557d8a068ef036225cb42f5c 593 Gene3D G3DSA:2.40.110.10 160 270 3.8E-27 T 09-03-2017 NA29_RS17735 867bae36557d8a068ef036225cb42f5c 593 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 449 8.2E-26 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS17735 867bae36557d8a068ef036225cb42f5c 593 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 270 1.6E-16 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NA29_RS17735 867bae36557d8a068ef036225cb42f5c 593 SUPERFAMILY SSF47203 288 459 4.51E-44 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS17735 867bae36557d8a068ef036225cb42f5c 593 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 37 156 3.9E-14 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS17735 867bae36557d8a068ef036225cb42f5c 593 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 2 33 2.4E-12 T 09-03-2017 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria NA29_RS17735 867bae36557d8a068ef036225cb42f5c 593 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 588 2.8E-27 T 09-03-2017 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain NA29_RS17735 867bae36557d8a068ef036225cb42f5c 593 SUPERFAMILY SSF56645 37 280 4.45E-62 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NA29_RS17735 867bae36557d8a068ef036225cb42f5c 593 Gene3D G3DSA:1.10.540.10 36 157 9.4E-20 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS17735 867bae36557d8a068ef036225cb42f5c 593 Gene3D G3DSA:1.20.140.10 271 459 4.8E-53 T 09-03-2017 NA29_RS16390 6e0bd7e6cb3334a743c8421c3883917d 224 Gene3D G3DSA:1.20.120.530 73 211 1.2E-26 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS16390 6e0bd7e6cb3334a743c8421c3883917d 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 1.6E-19 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16390 6e0bd7e6cb3334a743c8421c3883917d 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.2E-6 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16390 6e0bd7e6cb3334a743c8421c3883917d 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.2E-6 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16390 6e0bd7e6cb3334a743c8421c3883917d 224 SUPERFAMILY SSF46785 5 73 1.49E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16390 6e0bd7e6cb3334a743c8421c3883917d 224 Pfam PF07729 FCD domain 80 202 8.9E-26 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS16390 6e0bd7e6cb3334a743c8421c3883917d 224 SUPERFAMILY SSF48008 75 209 8.37E-25 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS16390 6e0bd7e6cb3334a743c8421c3883917d 224 SMART SM00345 11 69 9.5E-19 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16390 6e0bd7e6cb3334a743c8421c3883917d 224 Gene3D G3DSA:1.10.10.10 4 70 5.7E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16390 6e0bd7e6cb3334a743c8421c3883917d 224 SMART SM00895 79 203 9.4E-18 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS12980 558bdb3a2e96741c852dca6ea1439b32 184 Pfam PF14437 MafB19-like deaminase 8 154 1.6E-30 T 09-03-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 NA29_RS12980 558bdb3a2e96741c852dca6ea1439b32 184 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 13 154 48.704 T 09-03-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 NA29_RS12980 558bdb3a2e96741c852dca6ea1439b32 184 Gene3D G3DSA:3.40.140.10 4 152 5.4E-63 T 09-03-2017 NA29_RS12980 558bdb3a2e96741c852dca6ea1439b32 184 SUPERFAMILY SSF53927 4 155 1.37E-58 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 NA29_RS12980 558bdb3a2e96741c852dca6ea1439b32 184 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 58 95 - T 09-03-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 NA29_RS11145 48e1b0912c1b64cf597e1f60f639e307 368 SUPERFAMILY SSF53822 15 366 3.4E-62 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS11145 48e1b0912c1b64cf597e1f60f639e307 368 Pfam PF13458 Periplasmic binding protein 15 363 2.8E-43 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS11145 48e1b0912c1b64cf597e1f60f639e307 368 Gene3D G3DSA:3.40.50.2300 130 287 1.2E-28 T 09-03-2017 NA29_RS11145 48e1b0912c1b64cf597e1f60f639e307 368 Gene3D G3DSA:3.40.50.2300 288 348 2.2E-24 T 09-03-2017 NA29_RS11145 48e1b0912c1b64cf597e1f60f639e307 368 Gene3D G3DSA:3.40.50.2300 15 129 2.2E-24 T 09-03-2017 NA29_RS18955 8464fd43d632209181ec5ab6d410124b 344 Gene3D G3DSA:1.10.287.90 25 110 3.5E-31 T 09-03-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18955 8464fd43d632209181ec5ab6d410124b 344 SUPERFAMILY SSF81464 16 114 2.94E-21 T 09-03-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18955 8464fd43d632209181ec5ab6d410124b 344 Gene3D G3DSA:2.60.40.420 129 284 5.1E-42 T 09-03-2017 IPR008972 Cupredoxin NA29_RS18955 8464fd43d632209181ec5ab6d410124b 344 PIRSF PIRSF000292 1 316 9.9E-127 T 09-03-2017 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 NA29_RS18955 8464fd43d632209181ec5ab6d410124b 344 Pfam PF06481 COX Aromatic Rich Motif 244 288 7.6E-18 T 09-03-2017 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 NA29_RS18955 8464fd43d632209181ec5ab6d410124b 344 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 12 244 8.4E-107 T 09-03-2017 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 NA29_RS18955 8464fd43d632209181ec5ab6d410124b 344 SUPERFAMILY SSF49503 128 286 2.01E-52 T 09-03-2017 IPR008972 Cupredoxin NA29_RS18955 8464fd43d632209181ec5ab6d410124b 344 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 155 225 7.3E-8 T 09-03-2017 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS01200 a4a03747bb29216ae18d82d351b54e5a 446 SUPERFAMILY SSF53850 231 443 1.76E-32 T 09-03-2017 NA29_RS01200 a4a03747bb29216ae18d82d351b54e5a 446 SUPERFAMILY SSF46785 144 253 2.51E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01200 a4a03747bb29216ae18d82d351b54e5a 446 Pfam PF03466 LysR substrate binding domain 229 437 1.5E-29 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS01200 a4a03747bb29216ae18d82d351b54e5a 446 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 57 68 2.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01200 a4a03747bb29216ae18d82d351b54e5a 446 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 68 78 2.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01200 a4a03747bb29216ae18d82d351b54e5a 446 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 78 89 2.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01200 a4a03747bb29216ae18d82d351b54e5a 446 SUPERFAMILY SSF46785 40 118 4.4E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01200 a4a03747bb29216ae18d82d351b54e5a 446 Gene3D G3DSA:3.40.190.10 231 323 7.1E-17 T 09-03-2017 NA29_RS01200 a4a03747bb29216ae18d82d351b54e5a 446 Gene3D G3DSA:3.40.190.10 324 406 5.7E-10 T 09-03-2017 NA29_RS01200 a4a03747bb29216ae18d82d351b54e5a 446 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 42 101 7.9E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01200 a4a03747bb29216ae18d82d351b54e5a 446 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 146 203 3.0E-14 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01200 a4a03747bb29216ae18d82d351b54e5a 446 Gene3D G3DSA:1.10.10.10 41 121 1.7E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01200 a4a03747bb29216ae18d82d351b54e5a 446 Gene3D G3DSA:1.10.10.10 146 228 6.0E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17880 50cc0c305ae8e05b0bc76cf92291a65b 510 Pfam PF13193 AMP-binding enzyme C-terminal domain 423 499 1.8E-17 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS17880 50cc0c305ae8e05b0bc76cf92291a65b 510 SUPERFAMILY SSF56801 6 509 2.49E-143 T 09-03-2017 NA29_RS17880 50cc0c305ae8e05b0bc76cf92291a65b 510 Gene3D G3DSA:3.40.50.980 6 169 6.9E-35 T 09-03-2017 NA29_RS17880 50cc0c305ae8e05b0bc76cf92291a65b 510 Gene3D G3DSA:3.40.50.980 170 322 6.6E-37 T 09-03-2017 NA29_RS17880 50cc0c305ae8e05b0bc76cf92291a65b 510 Pfam PF00501 AMP-binding enzyme 12 414 2.3E-94 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS17880 50cc0c305ae8e05b0bc76cf92291a65b 510 Gene3D G3DSA:2.30.38.10 333 408 8.5E-30 T 09-03-2017 NA29_RS17880 50cc0c305ae8e05b0bc76cf92291a65b 510 ProSitePatterns PS00455 Putative AMP-binding domain signature. 164 175 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS17880 50cc0c305ae8e05b0bc76cf92291a65b 510 Gene3D G3DSA:3.30.300.30 409 508 1.1E-29 T 09-03-2017 NA29_RS02850 e25cc8747be07b39980247f80c3ff136 249 PIRSF PIRSF033328 14 249 1.9E-46 T 09-03-2017 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532 NA29_RS02850 e25cc8747be07b39980247f80c3ff136 249 Pfam PF06299 Protein of unknown function (DUF1045) 73 238 5.8E-51 T 09-03-2017 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532 NA29_RS02850 e25cc8747be07b39980247f80c3ff136 249 Gene3D G3DSA:3.90.1140.10 69 228 9.9E-5 T 09-03-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase NA29_RS17065 53c955215727d16dde17f04a767979e0 454 SUPERFAMILY SSF103473 9 446 8.11E-72 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS17065 53c955215727d16dde17f04a767979e0 454 Pfam PF07690 Major Facilitator Superfamily 35 309 7.9E-28 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS17065 53c955215727d16dde17f04a767979e0 454 Gene3D G3DSA:1.20.1250.20 263 445 2.4E-20 T 09-03-2017 NA29_RS17065 53c955215727d16dde17f04a767979e0 454 ProSitePatterns PS00216 Sugar transport proteins signature 1. 85 101 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS17065 53c955215727d16dde17f04a767979e0 454 Gene3D G3DSA:1.20.1250.20 27 209 1.8E-30 T 09-03-2017 NA29_RS25300 700fb50ca5ebb717f6948a6164480211 164 Gene3D G3DSA:3.30.70.920 57 141 2.8E-28 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS25300 700fb50ca5ebb717f6948a6164480211 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 09-03-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NA29_RS25300 700fb50ca5ebb717f6948a6164480211 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 2.3E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS25300 700fb50ca5ebb717f6948a6164480211 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 2.3E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS25300 700fb50ca5ebb717f6948a6164480211 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 2.3E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS25300 700fb50ca5ebb717f6948a6164480211 164 SUPERFAMILY SSF46785 4 63 5.79E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS25300 700fb50ca5ebb717f6948a6164480211 164 Pfam PF01037 Lrp/AsnC ligand binding domain 73 143 5.1E-22 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS25300 700fb50ca5ebb717f6948a6164480211 164 SUPERFAMILY SSF54909 66 152 3.62E-20 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS25300 700fb50ca5ebb717f6948a6164480211 164 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 1.5E-12 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS25300 700fb50ca5ebb717f6948a6164480211 164 Gene3D G3DSA:1.10.10.10 2 55 3.6E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS25300 700fb50ca5ebb717f6948a6164480211 164 SMART SM00344 4 113 6.2E-31 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NA29_RS00800 da9a9043ababe5255ab79e462da2d25d 203 Pfam PF09482 Bacterial type III secretion apparatus protein (OrgA_MxiK) 21 193 1.0E-38 T 09-03-2017 IPR013388 Type III secretion apparatus protein OrgA/MxiK GO:0009405 NA29_RS00800 da9a9043ababe5255ab79e462da2d25d 203 TIGRFAM TIGR02555 OrgA_MxiK: type III secretion apparatus protein OrgA/MxiK 20 200 5.8E-40 T 09-03-2017 IPR013388 Type III secretion apparatus protein OrgA/MxiK GO:0009405 NA29_RS07665 0a00c2816dc402683649dcf0f975033b 320 SUPERFAMILY SSF53474 54 313 4.75E-42 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS07665 0a00c2816dc402683649dcf0f975033b 320 Gene3D G3DSA:3.40.50.1820 59 314 5.8E-50 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS07665 0a00c2816dc402683649dcf0f975033b 320 Pfam PF07859 alpha/beta hydrolase fold 92 291 7.6E-23 T 09-03-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NA29_RS07070 b2ddbab04bb867ac840210aacab716b0 563 Pfam PF01464 Transglycosylase SLT domain 122 225 3.0E-25 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 NA29_RS07070 b2ddbab04bb867ac840210aacab716b0 563 SMART SM00257 344 388 1.3 T 09-03-2017 IPR018392 LysM domain NA29_RS07070 b2ddbab04bb867ac840210aacab716b0 563 SMART SM00257 420 463 0.02 T 09-03-2017 IPR018392 LysM domain NA29_RS07070 b2ddbab04bb867ac840210aacab716b0 563 SUPERFAMILY SSF53955 113 274 2.01E-42 T 09-03-2017 IPR023346 Lysozyme-like domain NA29_RS07070 b2ddbab04bb867ac840210aacab716b0 563 Gene3D G3DSA:1.10.530.10 110 271 6.1E-44 T 09-03-2017 NA29_RS07070 b2ddbab04bb867ac840210aacab716b0 563 SUPERFAMILY SSF54106 420 464 3.66E-7 T 09-03-2017 IPR018392 LysM domain NA29_RS07070 b2ddbab04bb867ac840210aacab716b0 563 Gene3D G3DSA:3.10.350.10 342 389 4.8E-5 T 09-03-2017 IPR018392 LysM domain NA29_RS07070 b2ddbab04bb867ac840210aacab716b0 563 Gene3D G3DSA:3.10.350.10 424 463 5.9E-10 T 09-03-2017 IPR018392 LysM domain NA29_RS07070 b2ddbab04bb867ac840210aacab716b0 563 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 135 163 - T 09-03-2017 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 NA29_RS07070 b2ddbab04bb867ac840210aacab716b0 563 Pfam PF01476 LysM domain 425 461 4.0E-5 T 09-03-2017 IPR018392 LysM domain NA29_RS06970 f5cee99c020e835656a33b1ee6b88f11 415 Pfam PF07690 Major Facilitator Superfamily 22 271 4.1E-17 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS06970 f5cee99c020e835656a33b1ee6b88f11 415 Gene3D G3DSA:1.20.1250.20 219 394 1.1E-18 T 09-03-2017 NA29_RS06970 f5cee99c020e835656a33b1ee6b88f11 415 Gene3D G3DSA:1.20.1250.20 21 199 1.2E-15 T 09-03-2017 NA29_RS06970 f5cee99c020e835656a33b1ee6b88f11 415 SUPERFAMILY SSF103473 18 394 8.76E-46 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS03340 dbd0ad8781584eea709a16176dbebcf8 302 SUPERFAMILY SSF53850 89 292 4.19E-22 T 09-03-2017 NA29_RS03340 dbd0ad8781584eea709a16176dbebcf8 302 Gene3D G3DSA:3.40.190.10 81 202 1.0E-7 T 09-03-2017 NA29_RS03340 dbd0ad8781584eea709a16176dbebcf8 302 SUPERFAMILY SSF46785 1 84 1.29E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03340 dbd0ad8781584eea709a16176dbebcf8 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 60 5.1E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03340 dbd0ad8781584eea709a16176dbebcf8 302 Pfam PF03466 LysR substrate binding domain 90 292 8.2E-24 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS03340 dbd0ad8781584eea709a16176dbebcf8 302 Gene3D G3DSA:1.10.10.10 1 80 7.8E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03340 dbd0ad8781584eea709a16176dbebcf8 302 Gene3D G3DSA:3.40.190.10 203 261 2.4E-9 T 09-03-2017 NA29_RS17185 2fb793bf335d92edde6631ef0125ce3a 270 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.9E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS17185 2fb793bf335d92edde6631ef0125ce3a 270 SUPERFAMILY SSF46785 1 84 1.59E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17185 2fb793bf335d92edde6631ef0125ce3a 270 Gene3D G3DSA:1.10.10.10 1 85 4.5E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17185 2fb793bf335d92edde6631ef0125ce3a 270 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.9E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS17185 2fb793bf335d92edde6631ef0125ce3a 270 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.9E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS17185 2fb793bf335d92edde6631ef0125ce3a 270 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.9E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS17185 2fb793bf335d92edde6631ef0125ce3a 270 SUPERFAMILY SSF53850 124 264 1.34E-10 T 09-03-2017 NA29_RS17185 2fb793bf335d92edde6631ef0125ce3a 270 Pfam PF03466 LysR substrate binding domain 145 262 1.8E-9 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS17185 2fb793bf335d92edde6631ef0125ce3a 270 Gene3D G3DSA:3.40.190.10 164 235 2.1E-5 T 09-03-2017 NA29_RS09175 1291c16bf1d3a680f744ca9b2373406b 442 SUPERFAMILY SSF54826 4 134 3.7E-34 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS09175 1291c16bf1d3a680f744ca9b2373406b 442 SUPERFAMILY SSF51604 136 410 1.61E-81 T 09-03-2017 IPR029065 Enolase C-terminal domain-like NA29_RS09175 1291c16bf1d3a680f744ca9b2373406b 442 Gene3D G3DSA:3.30.390.10 9 115 5.7E-11 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS09175 1291c16bf1d3a680f744ca9b2373406b 442 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 39 134 2.7E-6 T 09-03-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain NA29_RS09175 1291c16bf1d3a680f744ca9b2373406b 442 Pfam PF13378 Enolase C-terminal domain-like 186 401 3.0E-35 T 09-03-2017 IPR029065 Enolase C-terminal domain-like NA29_RS09175 1291c16bf1d3a680f744ca9b2373406b 442 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 3 442 2.7E-262 T 09-03-2017 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499 NA29_RS09175 1291c16bf1d3a680f744ca9b2373406b 442 SMART SM00922 182 282 2.1E-16 T 09-03-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal NA29_RS09175 1291c16bf1d3a680f744ca9b2373406b 442 Gene3D G3DSA:3.20.20.120 116 394 1.2E-101 T 09-03-2017 IPR029065 Enolase C-terminal domain-like NA29_RS18830 08938610eecf80794cbdb8e5303322ff 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 71 1.2E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18830 08938610eecf80794cbdb8e5303322ff 315 SUPERFAMILY SSF53850 99 306 8.31E-40 T 09-03-2017 NA29_RS18830 08938610eecf80794cbdb8e5303322ff 315 Gene3D G3DSA:3.40.190.10 100 186 1.7E-20 T 09-03-2017 NA29_RS18830 08938610eecf80794cbdb8e5303322ff 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 5.3E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18830 08938610eecf80794cbdb8e5303322ff 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 5.3E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18830 08938610eecf80794cbdb8e5303322ff 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 5.3E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18830 08938610eecf80794cbdb8e5303322ff 315 SUPERFAMILY SSF46785 9 119 3.54E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18830 08938610eecf80794cbdb8e5303322ff 315 Gene3D G3DSA:3.40.190.10 187 272 2.0E-15 T 09-03-2017 NA29_RS18830 08938610eecf80794cbdb8e5303322ff 315 Pfam PF03466 LysR substrate binding domain 97 305 1.5E-38 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS18830 08938610eecf80794cbdb8e5303322ff 315 Gene3D G3DSA:1.10.10.10 10 87 1.3E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18830 08938610eecf80794cbdb8e5303322ff 315 TIGRFAM TIGR02424 TF_pcaQ: pca operon transcription factor PcaQ 9 306 6.8E-100 T 09-03-2017 IPR012787 Pca transcription factor PcaQ GO:0003677|GO:0019619|GO:0045893 NA29_RS24745 cda8adafb80143030d012bd3a074d907 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 9.9E-17 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS24745 cda8adafb80143030d012bd3a074d907 223 SMART SM00448 1 112 1.1E-37 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS24745 cda8adafb80143030d012bd3a074d907 223 Gene3D G3DSA:3.40.50.2300 1 122 1.9E-38 T 09-03-2017 NA29_RS24745 cda8adafb80143030d012bd3a074d907 223 SUPERFAMILY SSF52172 1 166 1.71E-39 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS24745 cda8adafb80143030d012bd3a074d907 223 SMART SM00862 145 218 1.7E-15 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS24745 cda8adafb80143030d012bd3a074d907 223 SUPERFAMILY SSF46894 144 218 2.21E-14 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS24745 cda8adafb80143030d012bd3a074d907 223 Pfam PF00072 Response regulator receiver domain 4 113 3.0E-28 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS24745 cda8adafb80143030d012bd3a074d907 223 Gene3D G3DSA:1.10.10.10 123 220 6.0E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS02960 c9109536fc9fe551feab95262e956e1c 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 81 5.1E-16 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS02960 c9109536fc9fe551feab95262e956e1c 244 Pfam PF07729 FCD domain 91 215 3.6E-30 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS02960 c9109536fc9fe551feab95262e956e1c 244 Gene3D G3DSA:1.20.120.530 85 227 8.3E-35 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS02960 c9109536fc9fe551feab95262e956e1c 244 SUPERFAMILY SSF46785 13 85 1.36E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS02960 c9109536fc9fe551feab95262e956e1c 244 SMART SM00345 23 81 6.4E-15 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS02960 c9109536fc9fe551feab95262e956e1c 244 TIGRFAM TIGR03338 phnR_burk: phosphonate utilization associated transcriptional regulator 10 220 2.1E-94 T 09-03-2017 IPR017723 Transcription regulator, 2-aminoethylphosphonate utilisation-associated NA29_RS02960 c9109536fc9fe551feab95262e956e1c 244 SMART SM00895 91 216 1.8E-24 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS02960 c9109536fc9fe551feab95262e956e1c 244 Gene3D G3DSA:1.10.10.10 6 82 4.9E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS02960 c9109536fc9fe551feab95262e956e1c 244 SUPERFAMILY SSF48008 87 224 1.07E-32 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS01640 25f3182f746c9b591d87db589778573d 313 Gene3D G3DSA:3.20.20.410 1 87 2.6E-81 T 09-03-2017 IPR002763 Protein of unknown function DUF72 NA29_RS01640 25f3182f746c9b591d87db589778573d 313 Gene3D G3DSA:3.20.20.410 120 306 2.6E-81 T 09-03-2017 IPR002763 Protein of unknown function DUF72 NA29_RS01640 25f3182f746c9b591d87db589778573d 313 Pfam PF01904 Protein of unknown function DUF72 22 303 8.2E-55 T 09-03-2017 IPR002763 Protein of unknown function DUF72 NA29_RS01640 25f3182f746c9b591d87db589778573d 313 SUPERFAMILY SSF117396 115 305 3.14E-65 T 09-03-2017 IPR002763 Protein of unknown function DUF72 NA29_RS01640 25f3182f746c9b591d87db589778573d 313 SUPERFAMILY SSF117396 1 82 3.14E-65 T 09-03-2017 IPR002763 Protein of unknown function DUF72 NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 Gene3D G3DSA:2.40.50.140 139 200 7.7E-26 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 Gene3D G3DSA:3.30.300.20 201 279 1.1E-31 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 SUPERFAMILY SSF69705 1 129 1.96E-39 T 09-03-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 443 489 1.7E-15 T 09-03-2017 IPR010214 Transcription termination factor NusA, C-terminal duplication NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 416 2.5E-20 T 09-03-2017 IPR010214 Transcription termination factor NusA, C-terminal duplication NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 Pfam PF14520 Helix-hairpin-helix domain 432 487 1.0E-9 T 09-03-2017 NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 Pfam PF08529 NusA N-terminal domain 4 127 8.7E-37 T 09-03-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 SMART SM00322 303 381 2.1E-4 T 09-03-2017 IPR004087 K Homology domain GO:0003676 NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 SUPERFAMILY SSF54814 281 344 4.19E-15 T 09-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 344 1.4E-121 T 09-03-2017 IPR010213 Transcription termination factor NusA GO:0003723 NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 SUPERFAMILY SSF47794 433 490 4.08E-13 T 09-03-2017 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 Pfam PF13184 NusA-like KH domain 232 299 6.4E-25 T 09-03-2017 IPR025249 KH domain, NusA-like GO:0003723 NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 Gene3D G3DSA:1.10.150.20 429 490 3.6E-21 T 09-03-2017 NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 Gene3D G3DSA:1.10.150.20 358 422 1.9E-22 T 09-03-2017 NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 Gene3D G3DSA:3.30.300.20 280 349 1.5E-28 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 SMART SM00316 136 202 8.9E-10 T 09-03-2017 IPR022967 RNA-binding domain, S1 NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 SUPERFAMILY SSF50249 136 201 3.9E-17 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 412 29.413 T 09-03-2017 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 SUPERFAMILY SSF47794 359 419 2.51E-16 T 09-03-2017 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 SUPERFAMILY SSF54814 202 280 1.44E-28 T 09-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 Pfam PF00575 S1 RNA binding domain 139 198 8.6E-9 T 09-03-2017 IPR003029 S1 domain GO:0003676 NA29_RS13750 8d5c84fcf6b02dfa07f9b27233679330 491 Gene3D G3DSA:3.30.1480.10 1 128 4.0E-44 T 09-03-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 NA29_RS12030 ee21d84615ba2da8168dc2d3573f2526 346 SUPERFAMILY SSF55469 24 99 8.11E-11 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 NA29_RS12030 ee21d84615ba2da8168dc2d3573f2526 346 Pfam PF00881 Nitroreductase family 138 329 2.5E-6 T 09-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 NA29_RS12030 ee21d84615ba2da8168dc2d3573f2526 346 Gene3D G3DSA:3.40.109.10 252 345 1.6E-14 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 NA29_RS12030 ee21d84615ba2da8168dc2d3573f2526 346 Gene3D G3DSA:3.40.109.10 138 202 1.6E-14 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 NA29_RS12030 ee21d84615ba2da8168dc2d3573f2526 346 Gene3D G3DSA:3.40.109.30 25 107 1.4E-13 T 09-03-2017 NA29_RS12030 ee21d84615ba2da8168dc2d3573f2526 346 SUPERFAMILY SSF55469 252 345 1.96E-9 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 NA29_RS12030 ee21d84615ba2da8168dc2d3573f2526 346 SUPERFAMILY SSF55469 136 202 1.96E-9 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 NA29_RS12085 3ccba291e0b6970c1d1e4504fe2b82ad 142 Pfam PF00011 Hsp20/alpha crystallin family 41 141 1.7E-19 T 09-03-2017 IPR002068 Alpha crystallin/Hsp20 domain NA29_RS12085 3ccba291e0b6970c1d1e4504fe2b82ad 142 SUPERFAMILY SSF49764 18 141 1.17E-33 T 09-03-2017 IPR008978 HSP20-like chaperone NA29_RS12085 3ccba291e0b6970c1d1e4504fe2b82ad 142 Gene3D G3DSA:2.60.40.790 13 142 1.9E-31 T 09-03-2017 IPR008978 HSP20-like chaperone NA29_RS11435 5e3709ea1e1b944e5a8e2fa80159568b 405 SUPERFAMILY SSF51556 61 361 4.72E-84 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS11435 5e3709ea1e1b944e5a8e2fa80159568b 405 Gene3D G3DSA:3.20.20.140 63 345 3.3E-43 T 09-03-2017 NA29_RS11435 5e3709ea1e1b944e5a8e2fa80159568b 405 SUPERFAMILY SSF51338 362 399 5.83E-28 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS11435 5e3709ea1e1b944e5a8e2fa80159568b 405 SUPERFAMILY SSF51338 4 61 5.83E-28 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS11435 5e3709ea1e1b944e5a8e2fa80159568b 405 TIGRFAM TIGR01224 hutI: imidazolonepropionase 22 398 8.7E-145 T 09-03-2017 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 NA29_RS11435 5e3709ea1e1b944e5a8e2fa80159568b 405 Gene3D G3DSA:2.30.40.10 2 62 1.3E-14 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS11435 5e3709ea1e1b944e5a8e2fa80159568b 405 Gene3D G3DSA:2.30.40.10 346 381 1.7E-8 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS11435 5e3709ea1e1b944e5a8e2fa80159568b 405 Pfam PF01979 Amidohydrolase family 58 380 2.8E-23 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS11435 5e3709ea1e1b944e5a8e2fa80159568b 405 Hamap MF_00372 Imidazolonepropionase [hutI]. 3 400 41.222 T 09-03-2017 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 NA29_RS12335 ec6f1b77095beb273e226f6b7d137aed 189 Gene3D G3DSA:1.10.10.10 3 87 1.3E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12335 ec6f1b77095beb273e226f6b7d137aed 189 Pfam PF03551 Transcriptional regulator PadR-like family 10 79 1.2E-10 T 09-03-2017 IPR005149 Transcription regulator PadR, N-terminal NA29_RS12335 ec6f1b77095beb273e226f6b7d137aed 189 Pfam PF10400 Virulence activator alpha C-term 92 175 8.3E-19 T 09-03-2017 IPR018309 Transcription regulator PadR, C-terminal NA29_RS12335 ec6f1b77095beb273e226f6b7d137aed 189 SUPERFAMILY SSF46785 3 175 9.67E-37 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21855 4bc048e2ee702c2fcf75976648f8486c 307 Gene3D G3DSA:3.40.190.10 250 306 2.0E-57 T 09-03-2017 NA29_RS21855 4bc048e2ee702c2fcf75976648f8486c 307 Gene3D G3DSA:3.40.190.10 34 137 2.0E-57 T 09-03-2017 NA29_RS21855 4bc048e2ee702c2fcf75976648f8486c 307 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 37 302 6.9E-65 T 09-03-2017 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 NA29_RS21855 4bc048e2ee702c2fcf75976648f8486c 307 SUPERFAMILY SSF53850 37 305 3.41E-66 T 09-03-2017 NA29_RS21855 4bc048e2ee702c2fcf75976648f8486c 307 Gene3D G3DSA:3.40.190.120 138 243 3.7E-31 T 09-03-2017 NA29_RS06345 7a45d0b544939771a13315cc28719d93 105 SUPERFAMILY SSF103481 8 104 7.32E-7 T 09-03-2017 NA29_RS06345 7a45d0b544939771a13315cc28719d93 105 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 105 25.287 T 09-03-2017 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 NA29_RS06345 7a45d0b544939771a13315cc28719d93 105 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 105 4.9E-39 T 09-03-2017 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 NA29_RS18335 7f11db2f72d80da9ea64c7df8dd969da 498 PIRSF PIRSF000110 1 497 9.8E-164 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 NA29_RS18335 7f11db2f72d80da9ea64c7df8dd969da 498 SUPERFAMILY SSF51735 3 198 1.97E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18335 7f11db2f72d80da9ea64c7df8dd969da 498 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 197 493 1.4E-114 T 09-03-2017 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 NA29_RS18335 7f11db2f72d80da9ea64c7df8dd969da 498 Gene3D G3DSA:3.40.50.720 5 194 1.5E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18335 7f11db2f72d80da9ea64c7df8dd969da 498 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 185 191 - T 09-03-2017 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 NA29_RS18335 7f11db2f72d80da9ea64c7df8dd969da 498 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 495 79.416 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 NA29_RS18335 7f11db2f72d80da9ea64c7df8dd969da 498 Gene3D G3DSA:3.30.360.10 195 494 3.5E-123 T 09-03-2017 NA29_RS18335 7f11db2f72d80da9ea64c7df8dd969da 498 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 195 6.9E-55 T 09-03-2017 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 NA29_RS18335 7f11db2f72d80da9ea64c7df8dd969da 498 SUPERFAMILY SSF55347 185 494 2.32E-115 T 09-03-2017 NA29_RS18335 7f11db2f72d80da9ea64c7df8dd969da 498 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 227 244 5.7E-48 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 NA29_RS18335 7f11db2f72d80da9ea64c7df8dd969da 498 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 336 362 5.7E-48 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 NA29_RS18335 7f11db2f72d80da9ea64c7df8dd969da 498 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 175 203 5.7E-48 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 NA29_RS18335 7f11db2f72d80da9ea64c7df8dd969da 498 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 245 261 5.7E-48 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 NA29_RS18335 7f11db2f72d80da9ea64c7df8dd969da 498 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 151 164 5.7E-48 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 NA29_RS18335 7f11db2f72d80da9ea64c7df8dd969da 498 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 495 2.7E-168 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 NA29_RS14360 3e3bca40e80682e54c27bd4df1c59cfa 386 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 368 32.877 T 09-03-2017 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 NA29_RS14360 3e3bca40e80682e54c27bd4df1c59cfa 386 SUPERFAMILY SSF55681 4 319 2.01E-59 T 09-03-2017 NA29_RS14360 3e3bca40e80682e54c27bd4df1c59cfa 386 PIRSF PIRSF001549 6 348 2.5E-39 T 09-03-2017 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 NA29_RS14360 3e3bca40e80682e54c27bd4df1c59cfa 386 Pfam PF13393 Histidyl-tRNA synthetase 10 317 6.1E-117 T 09-03-2017 NA29_RS14360 3e3bca40e80682e54c27bd4df1c59cfa 386 Gene3D G3DSA:3.30.930.10 17 317 8.9E-66 T 09-03-2017 NA29_RS14360 3e3bca40e80682e54c27bd4df1c59cfa 386 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 12 319 3.3E-85 T 09-03-2017 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 NA29_RS04000 9783b77e463c665769cb4d31a0b63e50 129 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 13 117 2.2E-18 T 09-03-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 NA29_RS04000 9783b77e463c665769cb4d31a0b63e50 129 SUPERFAMILY SSF54637 12 118 2.34E-31 T 09-03-2017 IPR029069 HotDog domain NA29_RS04000 9783b77e463c665769cb4d31a0b63e50 129 Pfam PF03061 Thioesterase superfamily 37 109 3.3E-16 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 NA29_RS04000 9783b77e463c665769cb4d31a0b63e50 129 Gene3D G3DSA:3.10.129.10 4 121 1.6E-34 T 09-03-2017 IPR029069 HotDog domain NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 SUPERFAMILY SSF82714 744 827 2.88E-11 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 SUPERFAMILY SSF82693 590 685 7.32E-7 T 09-03-2017 NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 SUPERFAMILY SSF82866 828 1049 6.41E-46 T 09-03-2017 NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 SUPERFAMILY SSF82693 74 169 2.75E-18 T 09-03-2017 NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 Pfam PF00873 AcrB/AcrD/AcrF family 40 1042 1.9E-158 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 Gene3D G3DSA:3.30.2090.10 219 299 3.8E-14 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 Gene3D G3DSA:3.30.2090.10 742 825 1.7E-11 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 Gene3D G3DSA:1.10.3850.10 833 1046 2.1E-51 T 09-03-2017 NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 Gene3D G3DSA:1.20.1640.10 319 531 1.5E-40 T 09-03-2017 NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 PRINTS PR00702 Acriflavin resistance protein family signature 364 387 6.7E-21 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 PRINTS PR00702 Acriflavin resistance protein family signature 72 90 6.7E-21 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 PRINTS PR00702 Acriflavin resistance protein family signature 418 442 6.7E-21 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 PRINTS PR00702 Acriflavin resistance protein family signature 576 593 6.7E-21 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 PRINTS PR00702 Acriflavin resistance protein family signature 496 519 6.7E-21 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 6.7E-21 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 SUPERFAMILY SSF82866 330 522 4.58E-33 T 09-03-2017 NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 Gene3D G3DSA:3.30.70.1430 594 668 4.0E-5 T 09-03-2017 NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 SUPERFAMILY SSF82714 219 299 3.53E-13 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 SUPERFAMILY SSF82693 170 216 9.94E-19 T 09-03-2017 NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 SUPERFAMILY SSF82693 302 353 9.94E-19 T 09-03-2017 NA29_RS10815 695d555b49cf6008f878742beb1899dd 1069 Gene3D G3DSA:3.30.70.1430 74 172 9.8E-20 T 09-03-2017 NA29_RS09020 450d7693bd41ecbaf7cbb4e8abbf0471 206 Gene3D G3DSA:1.25.40.10 102 206 4.0E-37 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS09020 450d7693bd41ecbaf7cbb4e8abbf0471 206 Gene3D G3DSA:1.20.58.320 18 100 2.6E-27 T 09-03-2017 NA29_RS09020 450d7693bd41ecbaf7cbb4e8abbf0471 206 SUPERFAMILY SSF48452 15 202 1.74E-63 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS09020 450d7693bd41ecbaf7cbb4e8abbf0471 206 Pfam PF06041 Bacterial protein of unknown function (DUF924) 21 203 2.5E-62 T 09-03-2017 IPR010323 Protein of unknown function DUF924 NA29_RS15145 517e3cf0e78cfe7417c54d96a8d5c0e6 305 Gene3D G3DSA:3.20.20.70 5 302 6.9E-116 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS15145 517e3cf0e78cfe7417c54d96a8d5c0e6 305 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 6 299 66.119 T 09-03-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS15145 517e3cf0e78cfe7417c54d96a8d5c0e6 305 Pfam PF00701 Dihydrodipicolinate synthetase family 8 299 6.6E-99 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS15145 517e3cf0e78cfe7417c54d96a8d5c0e6 305 SMART SM01130 6 301 6.8E-143 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS15145 517e3cf0e78cfe7417c54d96a8d5c0e6 305 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 9 299 2.5E-107 T 09-03-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS15145 517e3cf0e78cfe7417c54d96a8d5c0e6 305 SUPERFAMILY SSF51569 6 301 3.35E-103 T 09-03-2017 NA29_RS15145 517e3cf0e78cfe7417c54d96a8d5c0e6 305 PIRSF PIRSF001365 2 305 2.3E-88 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS15145 517e3cf0e78cfe7417c54d96a8d5c0e6 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 140 157 6.3E-34 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS15145 517e3cf0e78cfe7417c54d96a8d5c0e6 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 83 101 6.3E-34 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS15145 517e3cf0e78cfe7417c54d96a8d5c0e6 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 6.3E-34 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS15145 517e3cf0e78cfe7417c54d96a8d5c0e6 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 115 131 6.3E-34 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS17800 b9a855a9479bd3f656083631e41dd3f9 391 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 6 387 32.982 T 09-03-2017 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 NA29_RS17800 b9a855a9479bd3f656083631e41dd3f9 391 SMART SM00028 36 69 10.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS17800 b9a855a9479bd3f656083631e41dd3f9 391 SMART SM00028 250 283 170.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS17800 b9a855a9479bd3f656083631e41dd3f9 391 SMART SM00028 70 103 76.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS17800 b9a855a9479bd3f656083631e41dd3f9 391 SMART SM00028 181 214 270.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS17800 b9a855a9479bd3f656083631e41dd3f9 391 Pfam PF13432 Tetratricopeptide repeat 186 243 5.8E-4 T 09-03-2017 NA29_RS17800 b9a855a9479bd3f656083631e41dd3f9 391 Pfam PF13432 Tetratricopeptide repeat 43 90 3.6E-4 T 09-03-2017 NA29_RS17800 b9a855a9479bd3f656083631e41dd3f9 391 Gene3D G3DSA:1.25.40.10 36 283 1.7E-23 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS17800 b9a855a9479bd3f656083631e41dd3f9 391 SUPERFAMILY SSF48452 38 173 1.06E-11 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS17800 b9a855a9479bd3f656083631e41dd3f9 391 SUPERFAMILY SSF48452 151 315 7.59E-13 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS04865 0632be57860b98fcf375341d9926c96f 314 SUPERFAMILY SSF53850 88 298 7.19E-42 T 09-03-2017 NA29_RS04865 0632be57860b98fcf375341d9926c96f 314 Gene3D G3DSA:3.40.190.10 90 175 2.8E-21 T 09-03-2017 NA29_RS04865 0632be57860b98fcf375341d9926c96f 314 SUPERFAMILY SSF46785 1 84 1.74E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04865 0632be57860b98fcf375341d9926c96f 314 Pfam PF03466 LysR substrate binding domain 87 297 6.0E-49 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS04865 0632be57860b98fcf375341d9926c96f 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.6E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04865 0632be57860b98fcf375341d9926c96f 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04865 0632be57860b98fcf375341d9926c96f 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04865 0632be57860b98fcf375341d9926c96f 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04865 0632be57860b98fcf375341d9926c96f 314 Gene3D G3DSA:1.10.10.10 1 83 1.5E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04865 0632be57860b98fcf375341d9926c96f 314 Gene3D G3DSA:3.40.190.10 176 274 3.5E-35 T 09-03-2017 NA29_RS24215 9b06a91f13d45dad44381f4b21586b9c 759 SMART SM00919 163 400 5.7E-137 T 09-03-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 NA29_RS24215 9b06a91f13d45dad44381f4b21586b9c 759 Gene3D G3DSA:3.40.50.10750 572 729 1.5E-51 T 09-03-2017 NA29_RS24215 9b06a91f13d45dad44381f4b21586b9c 759 SUPERFAMILY SSF53659 429 756 7.4E-85 T 09-03-2017 NA29_RS24215 9b06a91f13d45dad44381f4b21586b9c 759 SMART SM01274 18 151 1.1E-77 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 NA29_RS24215 9b06a91f13d45dad44381f4b21586b9c 759 SUPERFAMILY SSF51735 163 438 1.78E-84 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS24215 9b06a91f13d45dad44381f4b21586b9c 759 Gene3D G3DSA:3.40.50.720 161 438 1.9E-86 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS24215 9b06a91f13d45dad44381f4b21586b9c 759 PIRSF PIRSF036684 1 759 0.0 T 09-03-2017 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 NA29_RS24215 9b06a91f13d45dad44381f4b21586b9c 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 2.6E-26 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 NA29_RS24215 9b06a91f13d45dad44381f4b21586b9c 759 SUPERFAMILY SSF53223 10 161 9.35E-52 T 09-03-2017 NA29_RS24215 9b06a91f13d45dad44381f4b21586b9c 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 429 754 5.3E-95 T 09-03-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 NA29_RS24215 9b06a91f13d45dad44381f4b21586b9c 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 1.5E-21 T 09-03-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 NA29_RS24215 9b06a91f13d45dad44381f4b21586b9c 759 Gene3D G3DSA:3.40.50.10380 7 160 4.1E-51 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 NA29_RS24215 9b06a91f13d45dad44381f4b21586b9c 759 PRINTS PR00072 Malic enzyme signature 190 206 5.2E-5 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 NA29_RS24215 9b06a91f13d45dad44381f4b21586b9c 759 PRINTS PR00072 Malic enzyme signature 159 175 5.2E-5 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 NA29_RS24215 9b06a91f13d45dad44381f4b21586b9c 759 PRINTS PR00072 Malic enzyme signature 80 102 5.2E-5 T 09-03-2017 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 NA29_RS06270 f7914f43d473043046232b0bbb24c9d2 229 Pfam PF01965 DJ-1/PfpI family 25 222 9.1E-15 T 09-03-2017 IPR002818 DJ-1/PfpI NA29_RS06270 f7914f43d473043046232b0bbb24c9d2 229 Gene3D G3DSA:3.40.50.880 1 225 1.2E-90 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS06270 f7914f43d473043046232b0bbb24c9d2 229 SUPERFAMILY SSF52317 2 224 1.21E-75 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS09035 44f134ed00cf6cb307b3a1777def0c54 222 Gene3D G3DSA:1.10.357.10 6 195 7.2E-27 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS09035 44f134ed00cf6cb307b3a1777def0c54 222 SUPERFAMILY SSF46689 5 79 1.8E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS09035 44f134ed00cf6cb307b3a1777def0c54 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.1E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS09035 44f134ed00cf6cb307b3a1777def0c54 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.1E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS09035 44f134ed00cf6cb307b3a1777def0c54 222 Pfam PF13972 Bacterial transcriptional repressor 62 208 2.0E-42 T 09-03-2017 IPR025722 Bacterial transcriptional repressor TetR NA29_RS09035 44f134ed00cf6cb307b3a1777def0c54 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 7.4E-11 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS06280 25b60799c478105fd2b58d149594836b 253 Pfam PF01061 ABC-2 type transporter 6 216 3.0E-33 T 09-03-2017 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 NA29_RS06280 25b60799c478105fd2b58d149594836b 253 PIRSF PIRSF006648 12 253 2.5E-30 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS06280 25b60799c478105fd2b58d149594836b 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 99 124 1.7E-11 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS06280 25b60799c478105fd2b58d149594836b 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 1.7E-11 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS06280 25b60799c478105fd2b58d149594836b 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 55 77 1.7E-11 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS06280 25b60799c478105fd2b58d149594836b 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 1.7E-11 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS06280 25b60799c478105fd2b58d149594836b 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 136 160 1.7E-11 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS14455 2a373ef550a536d5e044abf6096cf455 398 SUPERFAMILY SSF53335 201 394 9.29E-35 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS14455 2a373ef550a536d5e044abf6096cf455 398 Gene3D G3DSA:3.40.50.150 199 396 1.6E-53 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS14455 2a373ef550a536d5e044abf6096cf455 398 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 189 397 32.581 T 09-03-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 NA29_RS14455 2a373ef550a536d5e044abf6096cf455 398 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 320 335 - T 09-03-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 NA29_RS14455 2a373ef550a536d5e044abf6096cf455 398 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 198 395 3.8E-51 T 09-03-2017 NA29_RS14455 2a373ef550a536d5e044abf6096cf455 398 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 192 395 2.0E-55 T 09-03-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 NA29_RS13140 49507031d615c98a3adcfbdc49d86e1b 112 Pfam PF03658 RnfH family Ubiquitin 6 87 4.7E-31 T 09-03-2017 IPR005346 RnfH protein NA29_RS13140 49507031d615c98a3adcfbdc49d86e1b 112 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 24.421 T 09-03-2017 IPR005346 RnfH protein NA29_RS13140 49507031d615c98a3adcfbdc49d86e1b 112 SUPERFAMILY SSF54285 5 78 2.48E-23 T 09-03-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp NA29_RS13140 49507031d615c98a3adcfbdc49d86e1b 112 Gene3D G3DSA:3.10.20.280 3 89 1.7E-32 T 09-03-2017 IPR005346 RnfH protein NA29_RS14080 666e3b5b484a7389d6739ac165034252 296 SUPERFAMILY SSF46894 4 97 1.3E-15 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS14080 666e3b5b484a7389d6739ac165034252 296 SUPERFAMILY SSF46894 155 237 3.68E-15 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS14080 666e3b5b484a7389d6739ac165034252 296 Gene3D G3DSA:1.10.10.10 4 97 1.5E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14080 666e3b5b484a7389d6739ac165034252 296 Gene3D G3DSA:1.10.10.10 154 237 1.4E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14080 666e3b5b484a7389d6739ac165034252 296 SMART SM00862 161 236 1.5E-11 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS14080 666e3b5b484a7389d6739ac165034252 296 SMART SM00862 19 95 8.5E-12 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS14080 666e3b5b484a7389d6739ac165034252 296 Pfam PF00486 Transcriptional regulatory protein, C terminal 23 95 2.8E-13 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS14080 666e3b5b484a7389d6739ac165034252 296 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 236 4.5E-12 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS02380 cb23c0f2de46998ec68cb0b77b7188d4 281 Gene3D G3DSA:2.40.160.10 162 281 1.3E-4 T 09-03-2017 IPR023614 Porin domain NA29_RS02380 cb23c0f2de46998ec68cb0b77b7188d4 281 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 47 281 2.2E-74 T 09-03-2017 IPR010239 Conserved hypothetical protein CHP02001 NA29_RS02380 cb23c0f2de46998ec68cb0b77b7188d4 281 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 36 281 4.9E-59 T 09-03-2017 IPR010239 Conserved hypothetical protein CHP02001 NA29_RS05105 186958855a131cd67b4402c75e21e0af 94 TIGRFAM TIGR03510 XapX: XapX domain 4 49 1.6E-17 T 09-03-2017 IPR020017 XapX domain NA29_RS05105 186958855a131cd67b4402c75e21e0af 94 Pfam PF07235 Protein of unknown function (DUF1427) 2 80 2.1E-34 T 09-03-2017 IPR009872 Protein of unknown function DUF1427 NA29_RS21745 182f1150da81870be41c0a779fcaa897 126 Pfam PF14552 Tautomerase enzyme 38 119 2.8E-33 T 09-03-2017 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 NA29_RS21745 182f1150da81870be41c0a779fcaa897 126 SUPERFAMILY SSF55331 2 125 1.08E-41 T 09-03-2017 IPR014347 Tautomerase/MIF superfamily NA29_RS21745 182f1150da81870be41c0a779fcaa897 126 Gene3D G3DSA:3.30.429.10 5 126 9.1E-42 T 09-03-2017 NA29_RS24120 5b7a51bfa1a273d8eda158e3d3dd8b40 772 Pfam PF07715 TonB-dependent Receptor Plug Domain 119 215 3.7E-12 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS24120 5b7a51bfa1a273d8eda158e3d3dd8b40 772 Gene3D G3DSA:2.170.130.10 85 223 4.9E-27 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS24120 5b7a51bfa1a273d8eda158e3d3dd8b40 772 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 119 772 1.8E-98 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NA29_RS24120 5b7a51bfa1a273d8eda158e3d3dd8b40 772 Pfam PF07660 Secretin and TonB N terminus short domain 23 69 3.4E-7 T 09-03-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NA29_RS24120 5b7a51bfa1a273d8eda158e3d3dd8b40 772 Pfam PF00593 TonB dependent receptor 525 770 1.8E-33 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS24120 5b7a51bfa1a273d8eda158e3d3dd8b40 772 SMART SM00965 19 69 1.3E-11 T 09-03-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NA29_RS24120 5b7a51bfa1a273d8eda158e3d3dd8b40 772 Gene3D G3DSA:2.40.170.20 244 772 1.9E-124 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS24120 5b7a51bfa1a273d8eda158e3d3dd8b40 772 SUPERFAMILY SSF56935 111 772 3.97E-110 T 09-03-2017 NA29_RS21420 d7d08333154d2471a8aed87986ea7661 302 Gene3D G3DSA:3.40.190.10 262 301 2.7E-7 T 09-03-2017 NA29_RS21420 d7d08333154d2471a8aed87986ea7661 302 Gene3D G3DSA:3.40.190.10 96 187 1.5E-21 T 09-03-2017 NA29_RS21420 d7d08333154d2471a8aed87986ea7661 302 Gene3D G3DSA:1.10.10.10 6 91 3.8E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21420 d7d08333154d2471a8aed87986ea7661 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 7.7E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21420 d7d08333154d2471a8aed87986ea7661 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 7.7E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21420 d7d08333154d2471a8aed87986ea7661 302 Pfam PF03466 LysR substrate binding domain 105 299 6.5E-32 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS21420 d7d08333154d2471a8aed87986ea7661 302 SUPERFAMILY SSF46785 9 90 4.42E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21420 d7d08333154d2471a8aed87986ea7661 302 SUPERFAMILY SSF53850 96 300 6.33E-43 T 09-03-2017 NA29_RS21420 d7d08333154d2471a8aed87986ea7661 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 2.4E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21420 d7d08333154d2471a8aed87986ea7661 302 Gene3D G3DSA:3.40.190.10 188 261 1.6E-25 T 09-03-2017 NA29_RS22485 a21d864dcd7c6ea1d859266a2b4400d7 114 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 1 83 1.0E-21 T 09-03-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 NA29_RS22485 a21d864dcd7c6ea1d859266a2b4400d7 114 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 14.524 T 09-03-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 NA29_RS22485 a21d864dcd7c6ea1d859266a2b4400d7 114 Pfam PF04999 Cell division protein FtsL 3 83 6.0E-15 T 09-03-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 NA29_RS19450 a8a4759cd9d58e4d934864dd8e3c4906 145 Gene3D G3DSA:3.30.460.10 2 107 4.1E-36 T 09-03-2017 NA29_RS19450 a8a4759cd9d58e4d934864dd8e3c4906 145 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 5.9E-33 T 09-03-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS NA29_RS19450 a8a4759cd9d58e4d934864dd8e3c4906 145 SUPERFAMILY SSF81301 1 109 1.18E-34 T 09-03-2017 NA29_RS19450 a8a4759cd9d58e4d934864dd8e3c4906 145 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 22.77 T 09-03-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS NA29_RS19450 a8a4759cd9d58e4d934864dd8e3c4906 145 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 2.2E-24 T 09-03-2017 NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 SUPERFAMILY SSF52540 15 71 1.43E-109 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 SUPERFAMILY SSF52540 136 220 1.43E-109 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 SUPERFAMILY SSF52540 850 875 1.43E-109 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 SUPERFAMILY SSF52540 356 815 1.43E-109 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 Gene3D G3DSA:1.10.486.10 631 776 4.9E-46 T 09-03-2017 NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 Gene3D G3DSA:3.90.320.10 958 1270 4.2E-82 T 09-03-2017 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 SUPERFAMILY SSF52980 966 1267 1.02E-67 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 Pfam PF13361 UvrD-like helicase C-terminal domain 571 870 1.2E-11 T 09-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 10 1266 1.5E-245 T 09-03-2017 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1034 1231 8.6E-8 T 09-03-2017 NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 5 1267 19.976 T 09-03-2017 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 Gene3D G3DSA:3.40.50.300 503 628 1.1E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 Gene3D G3DSA:3.40.50.300 777 918 1.1E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 Pfam PF00580 UvrD/REP helicase N-terminal domain 15 488 1.5E-53 T 09-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 Gene3D G3DSA:3.40.50.300 382 502 1.4E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 Gene3D G3DSA:3.40.50.300 15 73 1.4E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 Gene3D G3DSA:3.40.50.300 138 168 1.4E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19615 4cfb36b30cd2d7e6beb323738c59fb5b 1294 Gene3D G3DSA:1.10.3170.10 173 378 3.8E-27 T 09-03-2017 NA29_RS05235 d09e52218040004521e7f3ca452c36a9 332 Gene3D G3DSA:3.40.50.300 4 266 5.4E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05235 d09e52218040004521e7f3ca452c36a9 332 SMART SM00382 51 243 4.4E-20 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS05235 d09e52218040004521e7f3ca452c36a9 332 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS05235 d09e52218040004521e7f3ca452c36a9 332 SUPERFAMILY SSF52540 50 327 1.78E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05235 d09e52218040004521e7f3ca452c36a9 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 243 329 4.2E-28 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS05235 d09e52218040004521e7f3ca452c36a9 332 Pfam PF00005 ABC transporter 42 193 6.6E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS05235 d09e52218040004521e7f3ca452c36a9 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 309 7.1E-19 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS10655 fe8418f6f6ae2add00b5f55ce26c9ff1 224 SMART SM00421 148 205 1.5E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS10655 fe8418f6f6ae2add00b5f55ce26c9ff1 224 SMART SM00448 3 119 4.5E-11 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS10655 fe8418f6f6ae2add00b5f55ce26c9ff1 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 5.4E-6 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS10655 fe8418f6f6ae2add00b5f55ce26c9ff1 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 5.4E-6 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS10655 fe8418f6f6ae2add00b5f55ce26c9ff1 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 5.4E-6 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS10655 fe8418f6f6ae2add00b5f55ce26c9ff1 224 SUPERFAMILY SSF46894 139 206 1.12E-14 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS10655 fe8418f6f6ae2add00b5f55ce26c9ff1 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 202 3.1E-14 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS10655 fe8418f6f6ae2add00b5f55ce26c9ff1 224 Gene3D G3DSA:1.10.10.10 123 206 3.9E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10655 fe8418f6f6ae2add00b5f55ce26c9ff1 224 Pfam PF00072 Response regulator receiver domain 5 116 8.0E-18 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS10655 fe8418f6f6ae2add00b5f55ce26c9ff1 224 SUPERFAMILY SSF52172 2 136 1.42E-23 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS10655 fe8418f6f6ae2add00b5f55ce26c9ff1 224 Gene3D G3DSA:3.40.50.2300 2 122 3.1E-24 T 09-03-2017 NA29_RS15680 2847bbdf9537e20f9d250b1cb8d3a696 206 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 75 88 - T 09-03-2017 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 NA29_RS15680 2847bbdf9537e20f9d250b1cb8d3a696 206 SUPERFAMILY SSF53218 10 199 5.23E-47 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS15680 2847bbdf9537e20f9d250b1cb8d3a696 206 Pfam PF00994 Probable molybdopterin binding domain 14 156 6.3E-29 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS15680 2847bbdf9537e20f9d250b1cb8d3a696 206 Gene3D G3DSA:3.40.980.10 9 199 6.7E-53 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS15680 2847bbdf9537e20f9d250b1cb8d3a696 206 SMART SM00852 13 163 7.6E-27 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS15680 2847bbdf9537e20f9d250b1cb8d3a696 206 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 10 156 3.0E-37 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS25335 e8b8bcc92091511953d63a0aee2f7e91 675 Gene3D G3DSA:3.50.50.60 398 483 1.6E-27 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS25335 e8b8bcc92091511953d63a0aee2f7e91 675 Gene3D G3DSA:3.50.50.60 586 670 1.6E-27 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS25335 e8b8bcc92091511953d63a0aee2f7e91 675 Gene3D G3DSA:3.50.50.60 271 343 1.6E-27 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS25335 e8b8bcc92091511953d63a0aee2f7e91 675 SUPERFAMILY SSF51905 272 484 4.75E-29 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS25335 e8b8bcc92091511953d63a0aee2f7e91 675 SUPERFAMILY SSF51905 586 670 4.75E-29 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS25335 e8b8bcc92091511953d63a0aee2f7e91 675 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 270 674 3.1E-108 T 09-03-2017 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 NA29_RS25335 e8b8bcc92091511953d63a0aee2f7e91 675 Pfam PF01266 FAD dependent oxidoreductase 271 645 1.7E-35 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS25335 e8b8bcc92091511953d63a0aee2f7e91 675 Gene3D G3DSA:3.40.50.150 17 253 3.2E-78 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS25335 e8b8bcc92091511953d63a0aee2f7e91 675 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 122 227 6.3E-27 T 09-03-2017 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 NA29_RS25335 e8b8bcc92091511953d63a0aee2f7e91 675 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 11 670 24.103 T 09-03-2017 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 NA29_RS17530 d0b5ac7b71994d65c4770aecd706c2ce 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 249 2.7E-65 T 09-03-2017 NA29_RS17530 d0b5ac7b71994d65c4770aecd706c2ce 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.5E-37 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17530 d0b5ac7b71994d65c4770aecd706c2ce 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.5E-37 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17530 d0b5ac7b71994d65c4770aecd706c2ce 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.5E-37 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17530 d0b5ac7b71994d65c4770aecd706c2ce 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.5E-37 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17530 d0b5ac7b71994d65c4770aecd706c2ce 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.5E-37 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17530 d0b5ac7b71994d65c4770aecd706c2ce 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.5E-37 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17530 d0b5ac7b71994d65c4770aecd706c2ce 252 Gene3D G3DSA:3.40.50.720 1 252 2.0E-90 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17530 d0b5ac7b71994d65c4770aecd706c2ce 252 SUPERFAMILY SSF51735 4 251 1.04E-82 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17530 d0b5ac7b71994d65c4770aecd706c2ce 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.2E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17530 d0b5ac7b71994d65c4770aecd706c2ce 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.2E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17530 d0b5ac7b71994d65c4770aecd706c2ce 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.2E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS22720 988dae4737f24dd8c5c5c4bbeccac1b9 312 Pfam PF03466 LysR substrate binding domain 89 293 1.5E-46 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS22720 988dae4737f24dd8c5c5c4bbeccac1b9 312 SUPERFAMILY SSF53850 90 297 2.64E-47 T 09-03-2017 NA29_RS22720 988dae4737f24dd8c5c5c4bbeccac1b9 312 Gene3D G3DSA:3.40.190.10 178 262 3.4E-16 T 09-03-2017 NA29_RS22720 988dae4737f24dd8c5c5c4bbeccac1b9 312 SUPERFAMILY SSF46785 4 89 5.93E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS22720 988dae4737f24dd8c5c5c4bbeccac1b9 312 Gene3D G3DSA:1.10.10.10 4 88 4.9E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS22720 988dae4737f24dd8c5c5c4bbeccac1b9 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.0E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS22720 988dae4737f24dd8c5c5c4bbeccac1b9 312 Gene3D G3DSA:3.40.190.10 93 177 6.3E-24 T 09-03-2017 NA29_RS14280 0cd71b043e9c720cd645a880ed0bf765 422 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 262 275 9.1E-12 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NA29_RS14280 0cd71b043e9c720cd645a880ed0bf765 422 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 235 252 9.1E-12 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NA29_RS14280 0cd71b043e9c720cd645a880ed0bf765 422 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 185 196 9.1E-12 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NA29_RS14280 0cd71b043e9c720cd645a880ed0bf765 422 SUPERFAMILY SSF56601 157 395 1.75E-57 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS14280 0cd71b043e9c720cd645a880ed0bf765 422 Gene3D G3DSA:3.40.710.10 152 395 1.1E-68 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS14280 0cd71b043e9c720cd645a880ed0bf765 422 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 155 377 2.1E-56 T 09-03-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 NA29_RS04515 9eed4dff04a6fe7978dfdc56a2911a00 345 Hamap MF_00219 Dihydroorotase [pyrC]. 3 344 44.816 T 09-03-2017 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 NA29_RS04515 9eed4dff04a6fe7978dfdc56a2911a00 345 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 343 1.1E-147 T 09-03-2017 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 NA29_RS04515 9eed4dff04a6fe7978dfdc56a2911a00 345 Pfam PF01979 Amidohydrolase family 12 307 1.5E-19 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS04515 9eed4dff04a6fe7978dfdc56a2911a00 345 PIRSF PIRSF001237 1 345 1.1E-141 T 09-03-2017 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 NA29_RS04515 9eed4dff04a6fe7978dfdc56a2911a00 345 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 09-03-2017 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 NA29_RS04515 9eed4dff04a6fe7978dfdc56a2911a00 345 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 09-03-2017 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 NA29_RS04515 9eed4dff04a6fe7978dfdc56a2911a00 345 Gene3D G3DSA:3.20.20.140 2 343 7.1E-139 T 09-03-2017 NA29_RS04515 9eed4dff04a6fe7978dfdc56a2911a00 345 SUPERFAMILY SSF51556 4 343 1.33E-150 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS11350 0ea0e277d88609c4a7047cbeb55cb350 176 Gene3D G3DSA:3.40.30.10 3 173 6.1E-54 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS11350 0ea0e277d88609c4a7047cbeb55cb350 176 SUPERFAMILY SSF52833 32 171 3.32E-40 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS11350 0ea0e277d88609c4a7047cbeb55cb350 176 Pfam PF08534 Redoxin 30 167 5.4E-17 T 09-03-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 NA29_RS12965 2e16f46165e93fc11ecaad9eab47e328 171 Pfam PF09349 OHCU decarboxylase 11 166 1.4E-50 T 09-03-2017 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394 NA29_RS12965 2e16f46165e93fc11ecaad9eab47e328 171 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 14 168 2.1E-66 T 09-03-2017 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394 NA29_RS12965 2e16f46165e93fc11ecaad9eab47e328 171 Gene3D G3DSA:1.10.3330.10 11 170 5.1E-62 T 09-03-2017 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394 NA29_RS12965 2e16f46165e93fc11ecaad9eab47e328 171 SUPERFAMILY SSF158694 6 169 1.16E-55 T 09-03-2017 NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 Gene3D G3DSA:3.30.450.20 166 274 6.5E-13 T 09-03-2017 NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 SMART SM00052 471 716 4.2E-99 T 09-03-2017 IPR001633 EAL domain NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 Gene3D G3DSA:3.20.20.450 478 721 1.4E-90 T 09-03-2017 IPR001633 EAL domain NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 Pfam PF00989 PAS fold 186 268 6.4E-8 T 09-03-2017 IPR013767 PAS fold GO:0006355 NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 181 293 5.9E-13 T 09-03-2017 IPR000014 PAS domain NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 SUPERFAMILY SSF55073 309 461 1.26E-36 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 SUPERFAMILY SSF141868 478 720 4.32E-82 T 09-03-2017 IPR001633 EAL domain NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 Pfam PF00563 EAL domain 478 711 8.9E-69 T 09-03-2017 IPR001633 EAL domain NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 301 460 2.0E-29 T 09-03-2017 IPR000160 GGDEF domain NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 SMART SM00065 26 173 6.5E-5 T 09-03-2017 IPR003018 GAF domain GO:0005515 NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 Gene3D G3DSA:3.30.450.40 30 160 8.0E-16 T 09-03-2017 IPR029016 GAF domain-like NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 SMART SM00091 177 243 5.7E-6 T 09-03-2017 IPR000014 PAS domain NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 Gene3D G3DSA:3.30.70.270 306 465 4.1E-41 T 09-03-2017 NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 Pfam PF00990 Diguanylate cyclase, GGDEF domain 304 455 1.4E-33 T 09-03-2017 IPR000160 GGDEF domain NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 SMART SM00267 293 461 1.7E-39 T 09-03-2017 IPR000160 GGDEF domain NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 SUPERFAMILY SSF55781 31 168 2.51E-24 T 09-03-2017 IPR029016 GAF domain-like NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 Pfam PF01590 GAF domain 31 160 4.6E-11 T 09-03-2017 IPR003018 GAF domain GO:0005515 NA29_RS19755 fbd545c7ae6e994a0e3ce27c1869b676 730 SUPERFAMILY SSF55785 164 287 5.93E-15 T 09-03-2017 IPR000014 PAS domain NA29_RS10170 d362f66078573b1c39baa279725c9990 164 Pfam PF11162 Protein of unknown function (DUF2946) 51 162 3.3E-13 T 09-03-2017 IPR021333 Protein of unknown function DUF2946 NA29_RS15695 c009dbb0a388d9d8a1386d454a18293a 313 Pfam PF03193 Protein of unknown function, DUF258 73 246 2.3E-49 T 09-03-2017 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 NA29_RS15695 c009dbb0a388d9d8a1386d454a18293a 313 SUPERFAMILY SSF52540 90 309 2.38E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15695 c009dbb0a388d9d8a1386d454a18293a 313 SUPERFAMILY SSF50249 21 77 2.14E-6 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS15695 c009dbb0a388d9d8a1386d454a18293a 313 Gene3D G3DSA:2.40.50.140 19 75 1.3E-11 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS15695 c009dbb0a388d9d8a1386d454a18293a 313 Gene3D G3DSA:3.40.50.300 89 246 1.8E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15695 c009dbb0a388d9d8a1386d454a18293a 313 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 20 311 34.425 T 09-03-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 NA29_RS15695 c009dbb0a388d9d8a1386d454a18293a 313 Gene3D G3DSA:1.10.40.50 247 310 2.8E-23 T 09-03-2017 NA29_RS15695 c009dbb0a388d9d8a1386d454a18293a 313 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 55 304 1.9E-66 T 09-03-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 NA29_RS02785 62a2df32593a4b944d3e617ef7e86c29 204 Pfam PF01810 LysE type translocator 13 204 5.6E-42 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS02785 62a2df32593a4b944d3e617ef7e86c29 204 PIRSF PIRSF006324 1 204 3.0E-57 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS16310 2a02d464c5183909b842857c6791e07f 316 Pfam PF13247 4Fe-4S dicluster domain 92 188 1.6E-24 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NA29_RS16310 2a02d464c5183909b842857c6791e07f 316 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 289 4.5E-23 T 09-03-2017 IPR015246 Formate dehydrogenase, transmembrane NA29_RS16310 2a02d464c5183909b842857c6791e07f 316 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS16310 2a02d464c5183909b842857c6791e07f 316 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 2.0E-142 T 09-03-2017 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 NA29_RS16310 2a02d464c5183909b842857c6791e07f 316 Gene3D G3DSA:1.20.5.480 254 292 7.0E-22 T 09-03-2017 NA29_RS16310 2a02d464c5183909b842857c6791e07f 316 SUPERFAMILY SSF54862 29 271 2.93E-70 T 09-03-2017 NA29_RS16310 2a02d464c5183909b842857c6791e07f 316 Gene3D G3DSA:3.30.70.20 111 152 3.1E-21 T 09-03-2017 NA29_RS16310 2a02d464c5183909b842857c6791e07f 316 Gene3D G3DSA:3.30.70.20 153 253 7.6E-30 T 09-03-2017 NA29_RS16310 2a02d464c5183909b842857c6791e07f 316 Gene3D G3DSA:3.30.70.20 32 110 2.0E-12 T 09-03-2017 NA29_RS16310 2a02d464c5183909b842857c6791e07f 316 PIRSF PIRSF036298 1 305 8.8E-154 T 09-03-2017 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 NA29_RS25350 65daaf3653bfe6621d8bf6546a52985b 315 SUPERFAMILY SSF52821 178 305 1.57E-24 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS25350 65daaf3653bfe6621d8bf6546a52985b 315 Gene3D G3DSA:3.40.250.10 198 304 9.1E-21 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS25350 65daaf3653bfe6621d8bf6546a52985b 315 Pfam PF00581 Rhodanese-like domain 210 297 7.6E-7 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS25350 65daaf3653bfe6621d8bf6546a52985b 315 Pfam PF09335 SNARE associated Golgi protein 33 149 2.2E-15 T 09-03-2017 IPR032816 SNARE associated Golgi protein NA29_RS25350 65daaf3653bfe6621d8bf6546a52985b 315 SMART SM00450 203 301 2.4E-9 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS09325 fca40624f76dc9f838fa724d82bcf5d0 292 SUPERFAMILY SSF53474 18 279 9.82E-39 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS09325 fca40624f76dc9f838fa724d82bcf5d0 292 Pfam PF12697 Alpha/beta hydrolase family 36 283 1.2E-16 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS09325 fca40624f76dc9f838fa724d82bcf5d0 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 59 74 2.5E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS09325 fca40624f76dc9f838fa724d82bcf5d0 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 2.5E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS09325 fca40624f76dc9f838fa724d82bcf5d0 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 234 248 2.5E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS09325 fca40624f76dc9f838fa724d82bcf5d0 292 Gene3D G3DSA:3.40.50.1820 20 287 7.8E-72 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS17685 da7f0bed0bcd2c0e6f6bd81c70d4031d 200 Gene3D G3DSA:3.40.50.1240 1 196 2.2E-30 T 09-03-2017 IPR029033 Histidine phosphatase superfamily NA29_RS17685 da7f0bed0bcd2c0e6f6bd81c70d4031d 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 196 2.2E-30 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 NA29_RS17685 da7f0bed0bcd2c0e6f6bd81c70d4031d 200 SUPERFAMILY SSF53254 1 186 5.35E-32 T 09-03-2017 IPR029033 Histidine phosphatase superfamily NA29_RS14430 42cbb46e1f54e5391f76c4513c57fedd 233 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 23 225 8.7E-42 T 09-03-2017 NA29_RS05385 f055a032430ba025fd5165089930818b 194 Gene3D G3DSA:3.40.50.150 9 164 1.9E-22 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS05385 f055a032430ba025fd5165089930818b 194 Pfam PF05401 Nodulation protein S (NodS) 13 126 4.7E-16 T 09-03-2017 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 NA29_RS05385 f055a032430ba025fd5165089930818b 194 SUPERFAMILY SSF53335 25 165 2.3E-27 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS18295 38a180cf5b66cd96d46b18ad7a75ad50 458 Pfam PF07690 Major Facilitator Superfamily 21 408 1.9E-47 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS18295 38a180cf5b66cd96d46b18ad7a75ad50 458 Gene3D G3DSA:1.20.1250.20 14 197 6.1E-24 T 09-03-2017 NA29_RS18295 38a180cf5b66cd96d46b18ad7a75ad50 458 Gene3D G3DSA:1.20.1250.20 262 445 6.5E-21 T 09-03-2017 NA29_RS18295 38a180cf5b66cd96d46b18ad7a75ad50 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 7.6E-6 T 09-03-2017 NA29_RS18295 38a180cf5b66cd96d46b18ad7a75ad50 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 401 420 7.6E-6 T 09-03-2017 NA29_RS18295 38a180cf5b66cd96d46b18ad7a75ad50 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 7.6E-6 T 09-03-2017 NA29_RS18295 38a180cf5b66cd96d46b18ad7a75ad50 458 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 7.6E-6 T 09-03-2017 NA29_RS18295 38a180cf5b66cd96d46b18ad7a75ad50 458 SUPERFAMILY SSF103473 249 446 6.41E-63 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS18295 38a180cf5b66cd96d46b18ad7a75ad50 458 SUPERFAMILY SSF103473 9 200 6.41E-63 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS00460 c56ddb50f2f40228309da1a1f99401e9 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS00460 c56ddb50f2f40228309da1a1f99401e9 397 Gene3D G3DSA:2.40.30.110 330 388 6.7E-4 T 09-03-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NA29_RS00460 c56ddb50f2f40228309da1a1f99401e9 397 Gene3D G3DSA:1.20.1250.20 11 196 1.6E-14 T 09-03-2017 NA29_RS00460 c56ddb50f2f40228309da1a1f99401e9 397 Pfam PF07690 Major Facilitator Superfamily 17 230 1.0E-8 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS00460 c56ddb50f2f40228309da1a1f99401e9 397 SUPERFAMILY SSF103473 7 389 5.23E-29 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS22205 be2c8f48b17fd7831e89b8664f474af9 461 Pfam PF08245 Mur ligase middle domain 108 295 1.4E-25 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS22205 be2c8f48b17fd7831e89b8664f474af9 461 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 388 1.2E-11 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS22205 be2c8f48b17fd7831e89b8664f474af9 461 Gene3D G3DSA:3.40.1190.10 92 316 1.1E-91 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS22205 be2c8f48b17fd7831e89b8664f474af9 461 SUPERFAMILY SSF53244 315 456 7.33E-36 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS22205 be2c8f48b17fd7831e89b8664f474af9 461 Pfam PF01225 Mur ligase family, catalytic domain 2 101 8.8E-20 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 NA29_RS22205 be2c8f48b17fd7831e89b8664f474af9 461 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 456 1.5E-219 T 09-03-2017 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 NA29_RS22205 be2c8f48b17fd7831e89b8664f474af9 461 SUPERFAMILY SSF51984 1 90 1.01E-21 T 09-03-2017 NA29_RS22205 be2c8f48b17fd7831e89b8664f474af9 461 SUPERFAMILY SSF53623 98 313 2.35E-55 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS22205 be2c8f48b17fd7831e89b8664f474af9 461 Gene3D G3DSA:3.90.190.20 317 456 4.2E-35 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS22205 be2c8f48b17fd7831e89b8664f474af9 461 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 457 59.232 T 09-03-2017 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 NA29_RS22205 be2c8f48b17fd7831e89b8664f474af9 461 Gene3D G3DSA:3.40.50.720 1 90 2.2E-41 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS02775 81c432bd12995f0a18310d5431250415 660 SUPERFAMILY SSF51735 409 552 1.06E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS02775 81c432bd12995f0a18310d5431250415 660 Pfam PF02080 TrkA-C domain 590 649 2.7E-8 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NA29_RS02775 81c432bd12995f0a18310d5431250415 660 Gene3D G3DSA:3.40.50.720 408 541 5.3E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS02775 81c432bd12995f0a18310d5431250415 660 SUPERFAMILY SSF116726 582 653 1.57E-11 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NA29_RS02775 81c432bd12995f0a18310d5431250415 660 Pfam PF00999 Sodium/hydrogen exchanger family 9 376 6.1E-66 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 NA29_RS02775 81c432bd12995f0a18310d5431250415 660 Pfam PF02254 TrkA-N domain 413 526 5.3E-22 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 NA29_RS02775 81c432bd12995f0a18310d5431250415 660 Gene3D G3DSA:3.30.70.1450 585 653 2.7E-11 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NA29_RS19265 85352608ddd9fb13f4e6f89ad93d81d1 199 Pfam PF00881 Nitroreductase family 19 62 9.7E-13 T 09-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 NA29_RS19265 85352608ddd9fb13f4e6f89ad93d81d1 199 SUPERFAMILY SSF55469 6 196 1.15E-41 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 NA29_RS19265 85352608ddd9fb13f4e6f89ad93d81d1 199 Gene3D G3DSA:3.40.109.10 8 196 1.7E-41 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 NA29_RS01045 51128f15354325c0c809402d790cdc85 554 SUPERFAMILY SSF56645 69 294 3.38E-30 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NA29_RS01045 51128f15354325c0c809402d790cdc85 554 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 287 445 2.0E-32 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS01045 51128f15354325c0c809402d790cdc85 554 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 181 276 1.2E-17 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NA29_RS01045 51128f15354325c0c809402d790cdc85 554 Gene3D G3DSA:2.40.110.10 181 274 2.3E-19 T 09-03-2017 NA29_RS01045 51128f15354325c0c809402d790cdc85 554 Gene3D G3DSA:1.20.140.10 275 450 6.1E-38 T 09-03-2017 NA29_RS01045 51128f15354325c0c809402d790cdc85 554 SUPERFAMILY SSF47203 292 448 1.22E-40 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS19160 955c617f76613c17a0d0db978b9c9a3b 904 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 7 25 - T 09-03-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 NA29_RS19160 955c617f76613c17a0d0db978b9c9a3b 904 Pfam PF01568 Molydopterin dinucleotide binding domain 586 696 1.4E-27 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 NA29_RS19160 955c617f76613c17a0d0db978b9c9a3b 904 Gene3D G3DSA:2.20.25.90 2 52 1.2E-20 T 09-03-2017 NA29_RS19160 955c617f76613c17a0d0db978b9c9a3b 904 Gene3D G3DSA:3.40.228.10 136 317 5.0E-63 T 09-03-2017 NA29_RS19160 955c617f76613c17a0d0db978b9c9a3b 904 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 4 50 1.7E-19 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS19160 955c617f76613c17a0d0db978b9c9a3b 904 Pfam PF04324 BFD-like [2Fe-2S] binding domain 843 887 2.3E-7 T 09-03-2017 IPR007419 BFD-like [2Fe-2S]-binding domain NA29_RS19160 955c617f76613c17a0d0db978b9c9a3b 904 SUPERFAMILY SSF50692 554 702 2.26E-42 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain NA29_RS19160 955c617f76613c17a0d0db978b9c9a3b 904 Pfam PF00384 Molybdopterin oxidoreductase 60 488 1.3E-80 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS19160 955c617f76613c17a0d0db978b9c9a3b 904 Gene3D G3DSA:2.40.40.20 537 703 6.7E-47 T 09-03-2017 NA29_RS19160 955c617f76613c17a0d0db978b9c9a3b 904 SMART SM00926 2 56 4.9E-21 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS19160 955c617f76613c17a0d0db978b9c9a3b 904 Gene3D G3DSA:3.40.50.740 60 134 2.0E-73 T 09-03-2017 NA29_RS19160 955c617f76613c17a0d0db978b9c9a3b 904 Gene3D G3DSA:3.40.50.740 374 536 2.0E-73 T 09-03-2017 NA29_RS19160 955c617f76613c17a0d0db978b9c9a3b 904 Gene3D G3DSA:3.40.50.740 318 340 2.0E-73 T 09-03-2017 NA29_RS19160 955c617f76613c17a0d0db978b9c9a3b 904 SUPERFAMILY SSF53706 4 572 3.66E-194 T 09-03-2017 NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 SUPERFAMILY SSF63380 5 102 2.22E-24 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 SUPERFAMILY SSF54292 214 321 8.39E-28 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 Gene3D G3DSA:2.40.30.10 5 103 1.5E-28 T 09-03-2017 NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 270 278 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 SUPERFAMILY SSF52343 100 224 2.62E-28 T 09-03-2017 NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 92 106 8.6E-45 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 42 54 8.6E-45 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 191 199 8.6E-45 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 78 92 8.6E-45 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 54 68 8.6E-45 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 139 148 8.6E-45 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 32 42 8.6E-45 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 114 133 8.6E-45 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 Gene3D G3DSA:3.40.50.80 105 218 2.1E-25 T 09-03-2017 NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 243 310 9.8E-10 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 Gene3D G3DSA:3.10.20.30 219 318 3.3E-26 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS18185 1c1f36fed69b667bb3364e481934108b 321 Pfam PF00175 Oxidoreductase NAD-binding domain 115 203 1.8E-5 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NA29_RS10415 8825882919329aeba4e8603a468028a5 177 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.304 T 09-03-2017 IPR006008 Intracellular septation protein A GO:0016021 NA29_RS10415 8825882919329aeba4e8603a468028a5 177 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 5.8E-60 T 09-03-2017 IPR006008 Intracellular septation protein A GO:0016021 NA29_RS10415 8825882919329aeba4e8603a468028a5 177 Pfam PF04279 Intracellular septation protein A 1 175 9.4E-70 T 09-03-2017 IPR006008 Intracellular septation protein A GO:0016021 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 SUPERFAMILY SSF82866 296 497 3.92E-49 T 09-03-2017 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 Gene3D G3DSA:3.30.70.1430 568 671 2.9E-37 T 09-03-2017 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 SUPERFAMILY SSF82693 38 131 5.07E-28 T 09-03-2017 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 SUPERFAMILY SSF82866 806 1030 1.57E-46 T 09-03-2017 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 SUPERFAMILY SSF82714 182 271 1.14E-23 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 Gene3D G3DSA:1.10.3850.10 279 498 1.6E-59 T 09-03-2017 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 Gene3D G3DSA:1.10.3850.10 815 1028 9.5E-58 T 09-03-2017 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 Gene3D G3DSA:3.30.2090.10 181 275 1.4E-28 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 SUPERFAMILY SSF82693 566 671 7.85E-32 T 09-03-2017 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1042 0.0 T 09-03-2017 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 7.8E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 7.8E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 7.8E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 7.8E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 7.8E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 7.8E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 7.8E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 7.8E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 7.8E-112 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 Gene3D G3DSA:3.30.70.1430 38 139 1.0E-35 T 09-03-2017 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 SUPERFAMILY SSF82714 723 810 3.27E-23 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 SUPERFAMILY SSF82693 135 182 4.19E-28 T 09-03-2017 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 SUPERFAMILY SSF82693 274 330 4.19E-28 T 09-03-2017 NA29_RS05700 bf406372351bba804a483ff12d2e35b1 1059 Gene3D G3DSA:3.30.2090.10 722 810 2.0E-28 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS12055 35f232df4d7c779359f025043d5c762d 153 Gene3D G3DSA:3.40.50.620 1 149 1.0E-28 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS12055 35f232df4d7c779359f025043d5c762d 153 SUPERFAMILY SSF52402 1 149 6.95E-28 T 09-03-2017 NA29_RS12055 35f232df4d7c779359f025043d5c762d 153 Pfam PF00582 Universal stress protein family 1 149 9.5E-24 T 09-03-2017 IPR006016 UspA GO:0006950 NA29_RS12055 35f232df4d7c779359f025043d5c762d 153 PRINTS PR01438 Universal stress protein signature 109 121 4.5E-16 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS12055 35f232df4d7c779359f025043d5c762d 153 PRINTS PR01438 Universal stress protein signature 127 149 4.5E-16 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS12055 35f232df4d7c779359f025043d5c762d 153 PRINTS PR01438 Universal stress protein signature 2 20 4.5E-16 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS19770 9460454af4eb94b9f5a7580f37f574c0 212 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 201 34.365 T 09-03-2017 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 NA29_RS19770 9460454af4eb94b9f5a7580f37f574c0 212 SUPERFAMILY SSF52016 3 193 2.94E-48 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS19770 9460454af4eb94b9f5a7580f37f574c0 212 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 187 1.4E-52 T 09-03-2017 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 NA29_RS19770 9460454af4eb94b9f5a7580f37f574c0 212 Gene3D G3DSA:3.20.19.10 2 193 1.1E-35 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS19770 9460454af4eb94b9f5a7580f37f574c0 212 Pfam PF00694 Aconitase C-terminal domain 2 121 4.4E-26 T 09-03-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS17425 22dc0287b46a6278667663c4ebd0dfb8 434 PIRSF PIRSF001529 1 433 1.7E-177 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 NA29_RS17425 22dc0287b46a6278667663c4ebd0dfb8 434 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 3.7E-31 T 09-03-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 NA29_RS17425 22dc0287b46a6278667663c4ebd0dfb8 434 Gene3D G3DSA:1.10.287.40 1 104 1.4E-27 T 09-03-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 NA29_RS17425 22dc0287b46a6278667663c4ebd0dfb8 434 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 424 1.0E-163 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 NA29_RS17425 22dc0287b46a6278667663c4ebd0dfb8 434 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 232 407 3.7E-35 T 09-03-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS17425 22dc0287b46a6278667663c4ebd0dfb8 434 SUPERFAMILY SSF55681 116 427 8.57E-101 T 09-03-2017 NA29_RS17425 22dc0287b46a6278667663c4ebd0dfb8 434 Gene3D G3DSA:3.30.930.10 105 428 1.8E-141 T 09-03-2017 NA29_RS17425 22dc0287b46a6278667663c4ebd0dfb8 434 SUPERFAMILY SSF46589 1 112 5.75E-30 T 09-03-2017 IPR010978 tRNA-binding arm GO:0000166 NA29_RS17425 22dc0287b46a6278667663c4ebd0dfb8 434 PRINTS PR00981 Seryl-tRNA synthetase signature 324 337 2.1E-31 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 NA29_RS17425 22dc0287b46a6278667663c4ebd0dfb8 434 PRINTS PR00981 Seryl-tRNA synthetase signature 272 284 2.1E-31 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 NA29_RS17425 22dc0287b46a6278667663c4ebd0dfb8 434 PRINTS PR00981 Seryl-tRNA synthetase signature 284 297 2.1E-31 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 NA29_RS17425 22dc0287b46a6278667663c4ebd0dfb8 434 PRINTS PR00981 Seryl-tRNA synthetase signature 341 357 2.1E-31 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 NA29_RS17425 22dc0287b46a6278667663c4ebd0dfb8 434 PRINTS PR00981 Seryl-tRNA synthetase signature 359 375 2.1E-31 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 NA29_RS17425 22dc0287b46a6278667663c4ebd0dfb8 434 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 429 40.025 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 NA29_RS10675 f0432199e51e494981feffdb3a24560d 424 SUPERFAMILY SSF56529 126 421 3.53E-101 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS10675 f0432199e51e494981feffdb3a24560d 424 Pfam PF09298 Fumarylacetoacetase N-terminal 22 124 1.7E-31 T 09-03-2017 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 NA29_RS10675 f0432199e51e494981feffdb3a24560d 424 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 7 421 2.9E-183 T 09-03-2017 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 NA29_RS10675 f0432199e51e494981feffdb3a24560d 424 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 130 417 2.2E-57 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS10675 f0432199e51e494981feffdb3a24560d 424 SUPERFAMILY SSF63433 6 124 1.57E-34 T 09-03-2017 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 NA29_RS10675 f0432199e51e494981feffdb3a24560d 424 Gene3D G3DSA:3.90.850.10 127 414 2.2E-113 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS10675 f0432199e51e494981feffdb3a24560d 424 Gene3D G3DSA:2.30.30.230 7 126 5.1E-37 T 09-03-2017 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 NA29_RS04360 c46c0f9da7ba73d4fe1651344a4488e3 740 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 61 197 1.4E-11 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS04360 c46c0f9da7ba73d4fe1651344a4488e3 740 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 611 690 1.1E-7 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS04360 c46c0f9da7ba73d4fe1651344a4488e3 740 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 337 567 5.4E-27 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS04360 c46c0f9da7ba73d4fe1651344a4488e3 740 SUPERFAMILY SSF56003 338 735 8.37E-107 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS04360 c46c0f9da7ba73d4fe1651344a4488e3 740 Gene3D G3DSA:3.30.365.10 400 569 3.3E-31 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS04360 c46c0f9da7ba73d4fe1651344a4488e3 740 Gene3D G3DSA:3.90.1170.50 192 303 3.8E-21 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS04360 c46c0f9da7ba73d4fe1651344a4488e3 740 PIRSF PIRSF036389 13 740 7.7E-236 T 09-03-2017 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related NA29_RS04360 c46c0f9da7ba73d4fe1651344a4488e3 740 SMART SM01008 223 306 2.5E-18 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS04360 c46c0f9da7ba73d4fe1651344a4488e3 740 Gene3D G3DSA:3.30.365.10 61 190 4.0E-34 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS04360 c46c0f9da7ba73d4fe1651344a4488e3 740 Gene3D G3DSA:3.30.365.10 570 737 6.7E-29 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS04360 c46c0f9da7ba73d4fe1651344a4488e3 740 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 20 36 0.0011 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NA29_RS04360 c46c0f9da7ba73d4fe1651344a4488e3 740 SUPERFAMILY SSF56003 53 256 1.33E-42 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS05945 4f5e11b3b8cf95f3b61b0fa883c3d9f0 139 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 4 64 4.0E-8 T 09-03-2017 IPR031807 HicB-like antitoxin of toxin-antitoxin system NA29_RS05945 4f5e11b3b8cf95f3b61b0fa883c3d9f0 139 SUPERFAMILY SSF143100 1 63 1.83E-13 T 09-03-2017 NA29_RS01810 3b2d0611470d302d2ac3eb527cff2096 194 Pfam PF09186 Domain of unknown function (DUF1949) 134 187 3.0E-12 T 09-03-2017 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal NA29_RS01810 3b2d0611470d302d2ac3eb527cff2096 194 SUPERFAMILY SSF54211 4 122 1.44E-37 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS01810 3b2d0611470d302d2ac3eb527cff2096 194 Gene3D G3DSA:3.30.230.30 3 123 8.0E-41 T 09-03-2017 IPR001498 Impact, N-terminal NA29_RS01810 3b2d0611470d302d2ac3eb527cff2096 194 SUPERFAMILY SSF54980 132 190 1.08E-9 T 09-03-2017 IPR009022 Elongation factor G, III-V domain NA29_RS01810 3b2d0611470d302d2ac3eb527cff2096 194 Gene3D G3DSA:3.30.70.240 134 189 5.1E-10 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain NA29_RS01810 3b2d0611470d302d2ac3eb527cff2096 194 Pfam PF01205 Uncharacterized protein family UPF0029 15 117 7.2E-26 T 09-03-2017 IPR001498 Impact, N-terminal NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 09-03-2017 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 SMART SM00382 601 766 4.2E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 SMART SM00382 198 343 3.5E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 09-03-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.5E-10 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 9.8E-12 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 Gene3D G3DSA:1.10.8.60 780 863 7.0E-29 T 09-03-2017 NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 848 3.5E-24 T 09-03-2017 IPR019489 Clp ATPase, C-terminal NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 763 1.5E-54 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 09-03-2017 IPR028299 ClpA/B, conserved site 2 NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 SUPERFAMILY SSF52540 159 549 7.72E-99 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 Gene3D G3DSA:1.10.8.60 343 428 3.5E-36 T 09-03-2017 NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 Gene3D G3DSA:1.10.1780.10 1 147 4.3E-45 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 SUPERFAMILY SSF52540 550 851 8.85E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 SMART SM01086 769 858 5.7E-34 T 09-03-2017 IPR019489 Clp ATPase, C-terminal NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 Gene3D G3DSA:3.40.50.300 159 342 1.3E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 1.4E-42 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 1.4E-42 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 1.4E-42 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 1.4E-42 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 SUPERFAMILY SSF81923 4 156 5.49E-42 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 Gene3D G3DSA:3.40.50.300 554 779 2.7E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13450 b7edd74db290ab50a4d4194b87a70ba2 875 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 3.6E-13 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 Gene3D G3DSA:3.30.420.10 313 526 4.2E-79 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 ProSitePatterns PS00447 DNA polymerase family A signature. 738 757 - T 09-03-2017 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 SUPERFAMILY SSF88723 10 173 2.64E-56 T 09-03-2017 IPR029060 PIN domain-like NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 SUPERFAMILY SSF53098 318 499 4.47E-53 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 12 173 4.2E-53 T 09-03-2017 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 SUPERFAMILY SSF56672 509 912 8.01E-157 T 09-03-2017 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 Pfam PF00476 DNA polymerase family A 535 909 3.6E-152 T 09-03-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 Pfam PF01612 3'-5' exonuclease 315 500 2.9E-34 T 09-03-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 TIGRFAM TIGR00593 pola: DNA polymerase I 12 912 1.5E-274 T 09-03-2017 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 Gene3D G3DSA:3.40.50.1010 10 188 2.8E-70 T 09-03-2017 IPR029060 PIN domain-like NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 SMART SM00474 315 501 3.4E-33 T 09-03-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 174 261 2.3E-23 T 09-03-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 Gene3D G3DSA:3.30.70.370 647 695 7.6E-66 T 09-03-2017 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 Gene3D G3DSA:3.30.70.370 802 912 7.6E-66 T 09-03-2017 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 SMART SM00482 670 876 8.0E-112 T 09-03-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 Gene3D G3DSA:1.10.150.20 696 801 3.0E-36 T 09-03-2017 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 SUPERFAMILY SSF47807 174 292 2.69E-29 T 09-03-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 Gene3D G3DSA:1.10.150.20 189 248 1.5E-24 T 09-03-2017 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 Gene3D G3DSA:1.20.1060.10 527 646 4.4E-36 T 09-03-2017 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 SMART SM00475 9 266 6.7E-111 T 09-03-2017 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 SMART SM00279 176 211 4.9E-10 T 09-03-2017 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 797 808 2.3E-74 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 859 872 2.3E-74 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 738 763 2.3E-74 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 714 727 2.3E-74 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 662 677 2.3E-74 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 684 707 2.3E-74 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 639 661 2.3E-74 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 829 845 2.3E-74 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS07915 7eed1189847af77a9fb1a5879d3e2b76 912 PRINTS PR00868 DNA-polymerase family A (pol I) signature 775 786 2.3E-74 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS22340 6f24caf9755baffd8416089b3e03b9e0 86 Pfam PF01016 Ribosomal L27 protein 2 82 2.6E-36 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS22340 6f24caf9755baffd8416089b3e03b9e0 86 Gene3D G3DSA:2.40.50.100 20 82 2.6E-29 T 09-03-2017 NA29_RS22340 6f24caf9755baffd8416089b3e03b9e0 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 09-03-2017 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS22340 6f24caf9755baffd8416089b3e03b9e0 86 SUPERFAMILY SSF110324 2 82 5.23E-33 T 09-03-2017 NA29_RS22340 6f24caf9755baffd8416089b3e03b9e0 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.206 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS22340 6f24caf9755baffd8416089b3e03b9e0 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 66 1.0E-13 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS22340 6f24caf9755baffd8416089b3e03b9e0 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.5E-37 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS22340 6f24caf9755baffd8416089b3e03b9e0 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.5E-37 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS22340 6f24caf9755baffd8416089b3e03b9e0 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.5E-37 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS22340 6f24caf9755baffd8416089b3e03b9e0 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 4.8E-39 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS18910 b1cfea10a27c96b9705c30c96acddcd8 455 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS18910 b1cfea10a27c96b9705c30c96acddcd8 455 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS18910 b1cfea10a27c96b9705c30c96acddcd8 455 Gene3D G3DSA:1.20.1250.20 18 203 5.2E-41 T 09-03-2017 NA29_RS18910 b1cfea10a27c96b9705c30c96acddcd8 455 Pfam PF07690 Major Facilitator Superfamily 30 282 1.8E-36 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS18910 b1cfea10a27c96b9705c30c96acddcd8 455 SUPERFAMILY SSF103473 9 433 3.66E-83 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS18910 b1cfea10a27c96b9705c30c96acddcd8 455 Gene3D G3DSA:1.20.1250.20 254 431 4.0E-25 T 09-03-2017 NA29_RS06860 4045e6e1807a110e2c6e838fa134325c 727 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 86 727 1.1E-100 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NA29_RS06860 4045e6e1807a110e2c6e838fa134325c 727 Gene3D G3DSA:2.170.130.10 39 198 8.1E-26 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS06860 4045e6e1807a110e2c6e838fa134325c 727 SUPERFAMILY SSF56935 36 727 1.38E-99 T 09-03-2017 NA29_RS06860 4045e6e1807a110e2c6e838fa134325c 727 Pfam PF07715 TonB-dependent Receptor Plug Domain 85 181 2.3E-14 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS06860 4045e6e1807a110e2c6e838fa134325c 727 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 710 727 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site NA29_RS06860 4045e6e1807a110e2c6e838fa134325c 727 Pfam PF00593 TonB dependent receptor 493 725 8.2E-22 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS06860 4045e6e1807a110e2c6e838fa134325c 727 Gene3D G3DSA:2.40.170.20 203 727 2.8E-101 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS07790 14ebf0c4cda672596d78d3f3e4627133 236 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS07790 14ebf0c4cda672596d78d3f3e4627133 236 SMART SM00382 29 228 8.4E-4 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS07790 14ebf0c4cda672596d78d3f3e4627133 236 Gene3D G3DSA:3.40.50.300 3 233 4.6E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07790 14ebf0c4cda672596d78d3f3e4627133 236 Pfam PF00005 ABC transporter 20 164 5.1E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS07790 14ebf0c4cda672596d78d3f3e4627133 236 SUPERFAMILY SSF52540 3 233 2.48E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19730 a2d6e4209aa8da029a2a8c340a6d6ebf 762 PIRSF PIRSF036684 1 762 0.0 T 09-03-2017 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 NA29_RS19730 a2d6e4209aa8da029a2a8c340a6d6ebf 762 SUPERFAMILY SSF53659 430 760 1.11E-82 T 09-03-2017 NA29_RS19730 a2d6e4209aa8da029a2a8c340a6d6ebf 762 Gene3D G3DSA:3.40.50.720 162 440 5.2E-85 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS19730 a2d6e4209aa8da029a2a8c340a6d6ebf 762 Gene3D G3DSA:3.40.50.10380 6 161 5.7E-49 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 NA29_RS19730 a2d6e4209aa8da029a2a8c340a6d6ebf 762 SUPERFAMILY SSF51735 164 441 5.0E-82 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS19730 a2d6e4209aa8da029a2a8c340a6d6ebf 762 SUPERFAMILY SSF53223 11 162 3.17E-50 T 09-03-2017 NA29_RS19730 a2d6e4209aa8da029a2a8c340a6d6ebf 762 Pfam PF00390 Malic enzyme, N-terminal domain 21 152 4.7E-25 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 NA29_RS19730 a2d6e4209aa8da029a2a8c340a6d6ebf 762 SMART SM01274 19 152 5.7E-76 T 09-03-2017 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 NA29_RS19730 a2d6e4209aa8da029a2a8c340a6d6ebf 762 Gene3D G3DSA:3.40.50.10750 574 731 1.5E-47 T 09-03-2017 NA29_RS19730 a2d6e4209aa8da029a2a8c340a6d6ebf 762 Pfam PF03949 Malic enzyme, NAD binding domain 166 359 1.3E-19 T 09-03-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 NA29_RS19730 a2d6e4209aa8da029a2a8c340a6d6ebf 762 SMART SM00919 164 401 4.0E-132 T 09-03-2017 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 NA29_RS19730 a2d6e4209aa8da029a2a8c340a6d6ebf 762 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 756 1.7E-91 T 09-03-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 NA29_RS08485 b320296e4be960f915c743a7310ac81c 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 133 308 2.0E-6 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS08485 b320296e4be960f915c743a7310ac81c 312 Gene3D G3DSA:1.10.3720.10 37 308 1.5E-48 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS08485 b320296e4be960f915c743a7310ac81c 312 SUPERFAMILY SSF161098 30 308 4.67E-52 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS23425 c6f4ba1202a8c16326916889cec41544 264 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 17 234 1.2E-70 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NA29_RS23425 c6f4ba1202a8c16326916889cec41544 264 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 249 18.674 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NA29_RS23425 c6f4ba1202a8c16326916889cec41544 264 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 110 136 2.2E-46 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NA29_RS23425 c6f4ba1202a8c16326916889cec41544 264 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 92 110 2.2E-46 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NA29_RS23425 c6f4ba1202a8c16326916889cec41544 264 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 162 190 2.2E-46 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NA29_RS23425 c6f4ba1202a8c16326916889cec41544 264 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 15 42 2.2E-46 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NA29_RS23425 c6f4ba1202a8c16326916889cec41544 264 Pfam PF00902 Sec-independent protein translocase protein (TatC) 19 229 1.0E-66 T 09-03-2017 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 NA29_RS13130 f4e008adf6392fcff92011184e08db70 486 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 09-03-2017 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 NA29_RS13130 f4e008adf6392fcff92011184e08db70 486 SMART SM00116 156 204 1.7E-8 T 09-03-2017 IPR000644 CBS domain NA29_RS13130 f4e008adf6392fcff92011184e08db70 486 SMART SM00116 95 142 4.9E-11 T 09-03-2017 IPR000644 CBS domain NA29_RS13130 f4e008adf6392fcff92011184e08db70 486 SUPERFAMILY SSF51412 215 476 1.96E-128 T 09-03-2017 NA29_RS13130 f4e008adf6392fcff92011184e08db70 486 SUPERFAMILY SSF51412 2 89 1.96E-128 T 09-03-2017 NA29_RS13130 f4e008adf6392fcff92011184e08db70 486 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 485 84.657 T 09-03-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 NA29_RS13130 f4e008adf6392fcff92011184e08db70 486 Gene3D G3DSA:3.20.20.70 4 484 5.2E-206 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS13130 f4e008adf6392fcff92011184e08db70 486 SUPERFAMILY SSF54631 94 202 3.66E-27 T 09-03-2017 NA29_RS13130 f4e008adf6392fcff92011184e08db70 486 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 454 4.9E-192 T 09-03-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 NA29_RS13130 f4e008adf6392fcff92011184e08db70 486 SMART SM01240 6 472 0.0 T 09-03-2017 NA29_RS13130 f4e008adf6392fcff92011184e08db70 486 Pfam PF00571 CBS domain 147 202 2.1E-6 T 09-03-2017 IPR000644 CBS domain NA29_RS13130 f4e008adf6392fcff92011184e08db70 486 Pfam PF00571 CBS domain 94 138 5.1E-9 T 09-03-2017 IPR000644 CBS domain NA29_RS13130 f4e008adf6392fcff92011184e08db70 486 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 472 1.8E-166 T 09-03-2017 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 NA29_RS13130 f4e008adf6392fcff92011184e08db70 486 PIRSF PIRSF000130 1 486 3.0E-207 T 09-03-2017 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 NA29_RS21715 bc735d3da19c2ee75be5750fbbba995d 354 SUPERFAMILY SSF54752 279 337 2.88E-23 T 09-03-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal NA29_RS21715 bc735d3da19c2ee75be5750fbbba995d 354 SMART SM00382 68 239 1.0E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS21715 bc735d3da19c2ee75be5750fbbba995d 354 SUPERFAMILY SSF52540 15 278 1.93E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS21715 bc735d3da19c2ee75be5750fbbba995d 354 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 14 334 3.1E-171 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NA29_RS21715 bc735d3da19c2ee75be5750fbbba995d 354 Pfam PF00154 recA bacterial DNA recombination protein 17 279 3.8E-144 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NA29_RS21715 bc735d3da19c2ee75be5750fbbba995d 354 PRINTS PR00142 RecA protein signature 176 205 6.4E-86 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NA29_RS21715 bc735d3da19c2ee75be5750fbbba995d 354 PRINTS PR00142 RecA protein signature 138 167 6.4E-86 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NA29_RS21715 bc735d3da19c2ee75be5750fbbba995d 354 PRINTS PR00142 RecA protein signature 221 249 6.4E-86 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NA29_RS21715 bc735d3da19c2ee75be5750fbbba995d 354 PRINTS PR00142 RecA protein signature 254 283 6.4E-86 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NA29_RS21715 bc735d3da19c2ee75be5750fbbba995d 354 PRINTS PR00142 RecA protein signature 104 133 6.4E-86 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NA29_RS21715 bc735d3da19c2ee75be5750fbbba995d 354 PRINTS PR00142 RecA protein signature 308 325 6.4E-86 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NA29_RS21715 bc735d3da19c2ee75be5750fbbba995d 354 ProSitePatterns PS00321 recA signature. 224 232 - T 09-03-2017 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 NA29_RS21715 bc735d3da19c2ee75be5750fbbba995d 354 Hamap MF_00268 Protein RecA [recA]. 15 340 51.944 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 NA29_RS21715 bc735d3da19c2ee75be5750fbbba995d 354 Gene3D G3DSA:3.40.50.300 44 278 3.6E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS21715 bc735d3da19c2ee75be5750fbbba995d 354 Gene3D G3DSA:3.30.250.10 279 337 4.9E-32 T 09-03-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 Pfam PF01571 Aminomethyltransferase folate-binding domain 435 709 1.2E-79 T 09-03-2017 IPR006222 Glycine cleavage T-protein-like, N-terminal NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 Gene3D G3DSA:3.50.50.60 336 394 1.5E-62 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 Gene3D G3DSA:3.50.50.60 3 86 1.5E-62 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 Gene3D G3DSA:3.50.50.60 145 232 1.5E-62 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 SUPERFAMILY SSF51905 336 420 2.46E-63 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 SUPERFAMILY SSF51905 9 233 2.46E-63 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 Gene3D G3DSA:2.40.30.110 731 814 2.0E-19 T 09-03-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 Pfam PF01266 FAD dependent oxidoreductase 10 375 3.3E-65 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 SUPERFAMILY SSF54373 233 335 3.45E-32 T 09-03-2017 NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 SUPERFAMILY SSF103025 428 733 2.67E-96 T 09-03-2017 NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 719 815 1.8E-14 T 09-03-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 Gene3D G3DSA:3.30.70.1400 500 574 3.2E-22 T 09-03-2017 NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 Pfam PF16350 FAD dependent oxidoreductase central domain 379 433 4.7E-22 T 09-03-2017 IPR032503 FAD dependent oxidoreductase, central domain NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 SUPERFAMILY SSF101790 734 829 1.18E-16 T 09-03-2017 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 Gene3D G3DSA:3.30.9.10 233 335 2.6E-57 T 09-03-2017 NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 Gene3D G3DSA:3.30.9.10 90 144 2.6E-57 T 09-03-2017 NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 Gene3D G3DSA:3.30.1360.120 591 687 2.0E-38 T 09-03-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 NA29_RS02870 397b18aec907492482ba3a262bec0afe 829 Gene3D G3DSA:3.30.1360.120 431 499 2.0E-38 T 09-03-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 NA29_RS24165 ab4fd2f6dc950a2dd1ad99c7a329ac59 98 Pfam PF06243 Phenylacetic acid degradation B 8 95 9.8E-41 T 09-03-2017 IPR009359 Phenylacetic acid degradation B NA29_RS24165 ab4fd2f6dc950a2dd1ad99c7a329ac59 98 PIRSF PIRSF030200 1 98 9.1E-45 T 09-03-2017 IPR009359 Phenylacetic acid degradation B NA29_RS24165 ab4fd2f6dc950a2dd1ad99c7a329ac59 98 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 9 98 1.0E-44 T 09-03-2017 IPR009359 Phenylacetic acid degradation B NA29_RS12215 78bac468a3222748063024c55a923bd6 191 ProSitePatterns PS00213 Lipocalin signature. 45 56 - T 09-03-2017 IPR022272 Lipocalin family conserved site NA29_RS12215 78bac468a3222748063024c55a923bd6 191 SUPERFAMILY SSF50814 23 185 7.79E-45 T 09-03-2017 IPR011038 Calycin-like NA29_RS12215 78bac468a3222748063024c55a923bd6 191 Gene3D G3DSA:2.40.128.20 15 185 2.6E-52 T 09-03-2017 IPR012674 Calycin NA29_RS12215 78bac468a3222748063024c55a923bd6 191 PIRSF PIRSF036893 9 191 2.1E-42 T 09-03-2017 IPR022271 Lipocalin, ApoD type NA29_RS12215 78bac468a3222748063024c55a923bd6 191 PRINTS PR01171 Bacterial lipocalin signature 61 77 4.1E-29 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 NA29_RS12215 78bac468a3222748063024c55a923bd6 191 PRINTS PR01171 Bacterial lipocalin signature 146 157 4.1E-29 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 NA29_RS12215 78bac468a3222748063024c55a923bd6 191 PRINTS PR01171 Bacterial lipocalin signature 114 128 4.1E-29 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 NA29_RS12215 78bac468a3222748063024c55a923bd6 191 PRINTS PR01171 Bacterial lipocalin signature 173 183 4.1E-29 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 NA29_RS12215 78bac468a3222748063024c55a923bd6 191 PRINTS PR01171 Bacterial lipocalin signature 131 139 4.1E-29 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 NA29_RS12215 78bac468a3222748063024c55a923bd6 191 PRINTS PR01171 Bacterial lipocalin signature 80 89 4.1E-29 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 NA29_RS12215 78bac468a3222748063024c55a923bd6 191 PRINTS PR01171 Bacterial lipocalin signature 44 58 4.1E-29 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 NA29_RS12215 78bac468a3222748063024c55a923bd6 191 Pfam PF08212 Lipocalin-like domain 44 183 1.9E-42 T 09-03-2017 IPR000566 Lipocalin/cytosolic fatty-acid binding domain NA29_RS07345 5e1fc32c58449cea66e74e7bcb1dd301 158 Gene3D G3DSA:3.40.50.1240 1 156 4.0E-29 T 09-03-2017 IPR029033 Histidine phosphatase superfamily NA29_RS07345 5e1fc32c58449cea66e74e7bcb1dd301 158 SMART SM00855 2 114 8.1E-7 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 NA29_RS07345 5e1fc32c58449cea66e74e7bcb1dd301 158 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 71 6.2E-11 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 NA29_RS07345 5e1fc32c58449cea66e74e7bcb1dd301 158 SUPERFAMILY SSF53254 2 141 4.71E-21 T 09-03-2017 IPR029033 Histidine phosphatase superfamily NA29_RS20465 d4cb80b0d40e176816d6caa508df36fc 270 SUPERFAMILY SSF51735 1 156 1.17E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS20465 d4cb80b0d40e176816d6caa508df36fc 270 Gene3D G3DSA:3.40.50.720 1 156 7.4E-44 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS20465 d4cb80b0d40e176816d6caa508df36fc 270 SUPERFAMILY SSF48179 158 266 2.21E-32 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS20465 d4cb80b0d40e176816d6caa508df36fc 270 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 263 5.2E-79 T 09-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 NA29_RS20465 d4cb80b0d40e176816d6caa508df36fc 270 Gene3D G3DSA:1.10.3730.10 158 263 1.8E-33 T 09-03-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 NA29_RS20465 d4cb80b0d40e176816d6caa508df36fc 270 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 95 1.9E-17 T 09-03-2017 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal NA29_RS20465 d4cb80b0d40e176816d6caa508df36fc 270 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 263 26.563 T 09-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 NA29_RS20465 d4cb80b0d40e176816d6caa508df36fc 270 PIRSF PIRSF000193 1 266 1.6E-69 T 09-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 NA29_RS20465 d4cb80b0d40e176816d6caa508df36fc 270 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 218 241 - T 09-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 NA29_RS20465 d4cb80b0d40e176816d6caa508df36fc 270 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 159 263 8.0E-33 T 09-03-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 NA29_RS18820 bcef6ade3e77ee7a096722703b66c8a1 199 Gene3D G3DSA:2.60.130.10 7 198 4.2E-57 T 09-03-2017 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 NA29_RS18820 bcef6ade3e77ee7a096722703b66c8a1 199 Pfam PF00775 Dioxygenase 43 120 4.2E-13 T 09-03-2017 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 NA29_RS18820 bcef6ade3e77ee7a096722703b66c8a1 199 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 52 80 - T 09-03-2017 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 NA29_RS18820 bcef6ade3e77ee7a096722703b66c8a1 199 SUPERFAMILY SSF49482 6 198 1.15E-47 T 09-03-2017 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 NA29_RS18820 bcef6ade3e77ee7a096722703b66c8a1 199 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 10 198 3.0E-68 T 09-03-2017 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 NA29_RS00570 d349099a9175ad1bf8657cfc64a604e0 361 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 321 2.7E-41 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS05625 a016a9fed6bbe21a134b7669126f6a33 469 SMART SM00388 212 277 2.2E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS05625 a016a9fed6bbe21a134b7669126f6a33 469 Pfam PF00672 HAMP domain 143 207 6.6E-10 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS05625 a016a9fed6bbe21a134b7669126f6a33 469 SUPERFAMILY SSF47384 195 276 2.55E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS05625 a016a9fed6bbe21a134b7669126f6a33 469 SUPERFAMILY SSF55874 268 458 4.06E-30 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS05625 a016a9fed6bbe21a134b7669126f6a33 469 Pfam PF00512 His Kinase A (phospho-acceptor) domain 213 275 1.4E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS05625 a016a9fed6bbe21a134b7669126f6a33 469 Gene3D G3DSA:3.30.565.10 285 459 2.9E-33 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS05625 a016a9fed6bbe21a134b7669126f6a33 469 SMART SM00304 159 211 0.0026 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS05625 a016a9fed6bbe21a134b7669126f6a33 469 Gene3D G3DSA:1.10.287.130 205 273 5.4E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS05625 a016a9fed6bbe21a134b7669126f6a33 469 SMART SM00387 328 463 6.2E-32 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS05625 a016a9fed6bbe21a134b7669126f6a33 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 1.5E-7 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS05625 a016a9fed6bbe21a134b7669126f6a33 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 1.5E-7 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS05625 a016a9fed6bbe21a134b7669126f6a33 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 457 2.0E-16 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS08950 ea1d59420861df7fe1996e61ea0a9596 278 SMART SM00062 20 250 9.4E-46 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS08950 ea1d59420861df7fe1996e61ea0a9596 278 Gene3D G3DSA:3.40.190.10 17 104 4.0E-26 T 09-03-2017 NA29_RS08950 ea1d59420861df7fe1996e61ea0a9596 278 Gene3D G3DSA:3.40.190.10 210 252 4.0E-26 T 09-03-2017 NA29_RS08950 ea1d59420861df7fe1996e61ea0a9596 278 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 21 248 2.4E-48 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS08950 ea1d59420861df7fe1996e61ea0a9596 278 SUPERFAMILY SSF53850 10 251 1.09E-53 T 09-03-2017 NA29_RS08950 ea1d59420861df7fe1996e61ea0a9596 278 Gene3D G3DSA:3.40.190.10 105 209 2.7E-25 T 09-03-2017 NA29_RS19075 2a09f066b1ea3dfd514c1d8014a1b347 174 Gene3D G3DSA:3.40.50.850 3 168 3.0E-29 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS19075 2a09f066b1ea3dfd514c1d8014a1b347 174 Pfam PF00857 Isochorismatase family 16 165 7.0E-20 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS19075 2a09f066b1ea3dfd514c1d8014a1b347 174 SUPERFAMILY SSF52499 3 173 1.96E-32 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS02335 3cdb3ac66e6ee79a1645b501df3ae6c6 428 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 40 55 - T 09-03-2017 IPR018107 Sodium:dicarboxylate symporter, conserved site NA29_RS02335 3cdb3ac66e6ee79a1645b501df3ae6c6 428 Gene3D G3DSA:1.10.3860.10 11 412 2.5E-119 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS02335 3cdb3ac66e6ee79a1645b501df3ae6c6 428 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 1.5E-26 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS02335 3cdb3ac66e6ee79a1645b501df3ae6c6 428 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 1.5E-26 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS02335 3cdb3ac66e6ee79a1645b501df3ae6c6 428 PRINTS PR00173 Glutamate-aspartate symporter signature 150 172 1.5E-26 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS02335 3cdb3ac66e6ee79a1645b501df3ae6c6 428 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 1.5E-26 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS02335 3cdb3ac66e6ee79a1645b501df3ae6c6 428 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 1.5E-26 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS02335 3cdb3ac66e6ee79a1645b501df3ae6c6 428 SUPERFAMILY SSF118215 13 407 1.19E-121 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS02335 3cdb3ac66e6ee79a1645b501df3ae6c6 428 Pfam PF00375 Sodium:dicarboxylate symporter family 13 406 5.7E-115 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS02335 3cdb3ac66e6ee79a1645b501df3ae6c6 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 300 323 - T 09-03-2017 IPR018107 Sodium:dicarboxylate symporter, conserved site NA29_RS02335 3cdb3ac66e6ee79a1645b501df3ae6c6 428 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 6 428 38.453 T 09-03-2017 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 NA29_RS01245 f49f7bd72c5efe284dc7ceef0fdc9465 246 PRINTS PR00111 Alpha/beta hydrolase fold signature 62 75 2.5E-8 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS01245 f49f7bd72c5efe284dc7ceef0fdc9465 246 PRINTS PR00111 Alpha/beta hydrolase fold signature 76 89 2.5E-8 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS01245 f49f7bd72c5efe284dc7ceef0fdc9465 246 PRINTS PR00111 Alpha/beta hydrolase fold signature 182 196 2.5E-8 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS01245 f49f7bd72c5efe284dc7ceef0fdc9465 246 Pfam PF00561 alpha/beta hydrolase fold 41 225 2.3E-13 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS01245 f49f7bd72c5efe284dc7ceef0fdc9465 246 Gene3D G3DSA:3.40.50.1820 7 236 5.0E-39 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS01245 f49f7bd72c5efe284dc7ceef0fdc9465 246 SUPERFAMILY SSF53474 5 236 3.59E-43 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS24560 b513df1e7899693424e10fd0fb396dc3 218 Gene3D G3DSA:3.60.15.10 3 210 3.1E-59 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS24560 b513df1e7899693424e10fd0fb396dc3 218 SMART SM00849 12 192 1.7E-39 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS24560 b513df1e7899693424e10fd0fb396dc3 218 Pfam PF00753 Metallo-beta-lactamase superfamily 9 192 9.5E-33 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS24560 b513df1e7899693424e10fd0fb396dc3 218 SUPERFAMILY SSF56281 3 208 4.19E-59 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS10235 9343312821a41c3692370792aca059da 859 SUPERFAMILY SSF56059 204 334 4.18E-35 T 09-03-2017 NA29_RS10235 9343312821a41c3692370792aca059da 859 SUPERFAMILY SSF56059 370 460 4.18E-35 T 09-03-2017 NA29_RS10235 9343312821a41c3692370792aca059da 859 Gene3D G3DSA:3.30.470.20 383 442 5.1E-27 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS10235 9343312821a41c3692370792aca059da 859 Gene3D G3DSA:3.30.470.20 201 320 5.1E-27 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS10235 9343312821a41c3692370792aca059da 859 Pfam PF08245 Mur ligase middle domain 475 686 8.4E-21 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS10235 9343312821a41c3692370792aca059da 859 SUPERFAMILY SSF53244 711 838 4.27E-24 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS10235 9343312821a41c3692370792aca059da 859 SMART SM01209 203 418 0.002 T 09-03-2017 NA29_RS10235 9343312821a41c3692370792aca059da 859 Gene3D G3DSA:3.90.190.20 713 838 7.0E-23 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS10235 9343312821a41c3692370792aca059da 859 Pfam PF02875 Mur ligase family, glutamate ligase domain 711 793 4.1E-12 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS10235 9343312821a41c3692370792aca059da 859 SUPERFAMILY SSF53623 433 724 8.11E-43 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS10235 9343312821a41c3692370792aca059da 859 Gene3D G3DSA:3.40.1190.10 469 703 1.6E-38 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS10235 9343312821a41c3692370792aca059da 859 Pfam PF08443 RimK-like ATP-grasp domain 202 305 1.3E-9 T 09-03-2017 IPR013651 ATP-grasp fold, RimK-type NA29_RS10235 9343312821a41c3692370792aca059da 859 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 473 496 - T 09-03-2017 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 NA29_RS10235 9343312821a41c3692370792aca059da 859 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 2 853 0.0 T 09-03-2017 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 NA29_RS25225 ca766d2d38688df820ff6304cfba05d8 412 Gene3D G3DSA:3.20.20.140 63 351 4.5E-95 T 09-03-2017 NA29_RS25225 ca766d2d38688df820ff6304cfba05d8 412 SUPERFAMILY SSF51338 7 61 3.31E-16 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS25225 ca766d2d38688df820ff6304cfba05d8 412 SUPERFAMILY SSF51338 368 408 3.31E-16 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS25225 ca766d2d38688df820ff6304cfba05d8 412 SUPERFAMILY SSF51556 61 365 3.19E-88 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS25225 ca766d2d38688df820ff6304cfba05d8 412 Pfam PF01979 Amidohydrolase family 57 408 4.0E-41 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS25225 ca766d2d38688df820ff6304cfba05d8 412 Gene3D G3DSA:2.30.40.10 352 378 1.8E-6 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS25225 ca766d2d38688df820ff6304cfba05d8 412 Gene3D G3DSA:2.30.40.10 379 411 1.3E-25 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS25225 ca766d2d38688df820ff6304cfba05d8 412 Gene3D G3DSA:2.30.40.10 4 62 1.3E-25 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS13270 874b149bd706ed14d4172dc6c12ed6fd 660 SMART SM00363 412 469 2.5E-8 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS13270 874b149bd706ed14d4172dc6c12ed6fd 660 SUPERFAMILY SSF55120 473 656 7.68E-33 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS13270 874b149bd706ed14d4172dc6c12ed6fd 660 SUPERFAMILY SSF55174 412 504 1.11E-15 T 09-03-2017 NA29_RS13270 874b149bd706ed14d4172dc6c12ed6fd 660 Pfam PF01479 S4 domain 413 458 2.0E-9 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS13270 874b149bd706ed14d4172dc6c12ed6fd 660 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 516 654 5.9E-34 T 09-03-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 NA29_RS13270 874b149bd706ed14d4172dc6c12ed6fd 660 Pfam PF00849 RNA pseudouridylate synthase 474 624 1.1E-12 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS13270 874b149bd706ed14d4172dc6c12ed6fd 660 Gene3D G3DSA:3.10.290.10 411 462 6.8E-19 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS02150 380a9761473ae7255c10fb9f814f23f3 284 Pfam PF09339 IclR helix-turn-helix domain 29 80 1.2E-12 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS02150 380a9761473ae7255c10fb9f814f23f3 284 SUPERFAMILY SSF46785 27 100 6.66E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS02150 380a9761473ae7255c10fb9f814f23f3 284 Gene3D G3DSA:3.30.450.40 97 278 1.2E-41 T 09-03-2017 IPR029016 GAF domain-like NA29_RS02150 380a9761473ae7255c10fb9f814f23f3 284 SMART SM00346 27 117 1.0E-16 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS02150 380a9761473ae7255c10fb9f814f23f3 284 Pfam PF01614 Bacterial transcriptional regulator 145 254 1.4E-8 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS02150 380a9761473ae7255c10fb9f814f23f3 284 SUPERFAMILY SSF55781 93 276 3.2E-34 T 09-03-2017 IPR029016 GAF domain-like NA29_RS02150 380a9761473ae7255c10fb9f814f23f3 284 Gene3D G3DSA:1.10.10.10 20 96 2.1E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08110 b68943725ccf9fb032e8b81b15aaabe0 296 SUPERFAMILY SSF51735 5 166 2.96E-40 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS08110 b68943725ccf9fb032e8b81b15aaabe0 296 PIRSF PIRSF000103 1 295 6.6E-66 T 09-03-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 NA29_RS08110 b68943725ccf9fb032e8b81b15aaabe0 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 165 2.1E-42 T 09-03-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 NA29_RS08110 b68943725ccf9fb032e8b81b15aaabe0 296 Gene3D G3DSA:3.40.50.720 3 166 1.3E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS08110 b68943725ccf9fb032e8b81b15aaabe0 296 Gene3D G3DSA:1.10.1040.10 168 289 6.2E-28 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS08110 b68943725ccf9fb032e8b81b15aaabe0 296 SUPERFAMILY SSF48179 166 287 4.87E-26 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS08110 b68943725ccf9fb032e8b81b15aaabe0 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 286 9.7E-24 T 09-03-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 NA29_RS22225 68863d0101ad84034784e74c4472b68d 153 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 109 126 - T 09-03-2017 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 NA29_RS22225 68863d0101ad84034784e74c4472b68d 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 1.5E-19 T 09-03-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 NA29_RS22225 68863d0101ad84034784e74c4472b68d 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 1.5E-19 T 09-03-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 NA29_RS22225 68863d0101ad84034784e74c4472b68d 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 1.5E-19 T 09-03-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 NA29_RS22225 68863d0101ad84034784e74c4472b68d 153 Gene3D G3DSA:2.40.50.100 77 152 2.0E-32 T 09-03-2017 NA29_RS22225 68863d0101ad84034784e74c4472b68d 153 SUPERFAMILY SSF51230 78 152 1.83E-25 T 09-03-2017 IPR011053 Single hybrid motif NA29_RS22225 68863d0101ad84034784e74c4472b68d 153 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 152 2.2E-57 T 09-03-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 NA29_RS22225 68863d0101ad84034784e74c4472b68d 153 Pfam PF00364 Biotin-requiring enzyme 80 152 1.5E-25 T 09-03-2017 IPR000089 Biotin/lipoyl attachment NA29_RS17350 f77fe98109d5e26bbcd7e54c9e0695d8 215 Gene3D G3DSA:3.50.30.40 21 181 3.6E-42 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NA29_RS17350 f77fe98109d5e26bbcd7e54c9e0695d8 215 Pfam PF03737 Demethylmenaquinone methyltransferase 25 173 2.6E-35 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NA29_RS17350 f77fe98109d5e26bbcd7e54c9e0695d8 215 SUPERFAMILY SSF89562 21 184 1.07E-42 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NA29_RS13065 7bc764bb7c5e2eed7f63804f5010b6e4 304 Gene3D G3DSA:3.40.190.10 96 202 4.1E-29 T 09-03-2017 NA29_RS13065 7bc764bb7c5e2eed7f63804f5010b6e4 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 1.8E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13065 7bc764bb7c5e2eed7f63804f5010b6e4 304 Pfam PF03466 LysR substrate binding domain 96 299 3.2E-32 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS13065 7bc764bb7c5e2eed7f63804f5010b6e4 304 Gene3D G3DSA:1.10.10.10 7 89 5.2E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13065 7bc764bb7c5e2eed7f63804f5010b6e4 304 SUPERFAMILY SSF53850 96 302 6.7E-35 T 09-03-2017 NA29_RS13065 7bc764bb7c5e2eed7f63804f5010b6e4 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.3E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13065 7bc764bb7c5e2eed7f63804f5010b6e4 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.3E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13065 7bc764bb7c5e2eed7f63804f5010b6e4 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.3E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13065 7bc764bb7c5e2eed7f63804f5010b6e4 304 SUPERFAMILY SSF46785 8 90 6.6E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS22100 172b48e2448b2482709170bcbf54b587 336 SMART SM00846 3 155 9.4E-93 T 09-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS22100 172b48e2448b2482709170bcbf54b587 336 SUPERFAMILY SSF55347 155 316 9.52E-68 T 09-03-2017 NA29_RS22100 172b48e2448b2482709170bcbf54b587 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 8.9E-37 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS22100 172b48e2448b2482709170bcbf54b587 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 8.9E-37 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS22100 172b48e2448b2482709170bcbf54b587 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 8.9E-37 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS22100 172b48e2448b2482709170bcbf54b587 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 8.9E-37 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS22100 172b48e2448b2482709170bcbf54b587 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 8.9E-37 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS22100 172b48e2448b2482709170bcbf54b587 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 155 1.7E-57 T 09-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS22100 172b48e2448b2482709170bcbf54b587 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 327 4.7E-127 T 09-03-2017 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS22100 172b48e2448b2482709170bcbf54b587 336 PIRSF PIRSF000149 1 336 2.1E-134 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS22100 172b48e2448b2482709170bcbf54b587 336 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 09-03-2017 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS22100 172b48e2448b2482709170bcbf54b587 336 SUPERFAMILY SSF51735 3 176 2.94E-64 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22100 172b48e2448b2482709170bcbf54b587 336 Gene3D G3DSA:3.40.50.720 1 163 2.3E-72 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22100 172b48e2448b2482709170bcbf54b587 336 Gene3D G3DSA:3.30.360.10 164 317 4.1E-70 T 09-03-2017 NA29_RS22100 172b48e2448b2482709170bcbf54b587 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 315 3.0E-62 T 09-03-2017 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS01000 5ce02fb88fac8f5e69057dc00c35e0ca 203 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 26 49 6.0E-6 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site NA29_RS01000 5ce02fb88fac8f5e69057dc00c35e0ca 203 Gene3D G3DSA:3.30.1690.10 105 194 1.1E-9 T 09-03-2017 NA29_RS01000 5ce02fb88fac8f5e69057dc00c35e0ca 203 SUPERFAMILY SSF54523 89 189 5.89E-9 T 09-03-2017 NA29_RS01000 5ce02fb88fac8f5e69057dc00c35e0ca 203 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 27 47 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site NA29_RS01000 5ce02fb88fac8f5e69057dc00c35e0ca 203 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 24 48 3.3E-6 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site NA29_RS01000 5ce02fb88fac8f5e69057dc00c35e0ca 203 Pfam PF08805 PilS N terminal 96 193 1.4E-8 T 09-03-2017 IPR014911 Type 4 secretion system, PilS, N-terminal NA29_RS19350 172708fce8bc99e9021dd9a80a7a54ac 388 Gene3D G3DSA:3.40.47.10 208 228 7.1E-25 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS19350 172708fce8bc99e9021dd9a80a7a54ac 388 Gene3D G3DSA:3.40.47.10 12 122 7.1E-25 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS19350 172708fce8bc99e9021dd9a80a7a54ac 388 Gene3D G3DSA:3.40.47.10 246 383 1.5E-20 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS19350 172708fce8bc99e9021dd9a80a7a54ac 388 Gene3D G3DSA:3.40.47.10 147 183 1.5E-20 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS19350 172708fce8bc99e9021dd9a80a7a54ac 388 PIRSF PIRSF000429 1 386 5.9E-59 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS19350 172708fce8bc99e9021dd9a80a7a54ac 388 SUPERFAMILY SSF53901 17 120 2.97E-37 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS19350 172708fce8bc99e9021dd9a80a7a54ac 388 SUPERFAMILY SSF53901 187 359 2.97E-37 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS19350 172708fce8bc99e9021dd9a80a7a54ac 388 Pfam PF02803 Thiolase, C-terminal domain 261 360 5.8E-9 T 09-03-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 NA29_RS19350 172708fce8bc99e9021dd9a80a7a54ac 388 Pfam PF00108 Thiolase, N-terminal domain 13 183 2.1E-16 T 09-03-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 NA29_RS22650 e943e8a561747a5d246aaacf1f1001a1 497 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 292 6.3E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS22650 e943e8a561747a5d246aaacf1f1001a1 497 SMART SM00387 358 471 4.5E-23 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS22650 e943e8a561747a5d246aaacf1f1001a1 497 Pfam PF08521 Two-component sensor kinase N-terminal 19 149 1.5E-8 T 09-03-2017 IPR013727 Two-component sensor kinase, N-terminal NA29_RS22650 e943e8a561747a5d246aaacf1f1001a1 497 SMART SM00388 229 293 5.5E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS22650 e943e8a561747a5d246aaacf1f1001a1 497 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 468 1.5E-14 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS22650 e943e8a561747a5d246aaacf1f1001a1 497 Gene3D G3DSA:3.30.565.10 279 311 4.4E-26 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS22650 e943e8a561747a5d246aaacf1f1001a1 497 Gene3D G3DSA:3.30.565.10 351 469 4.4E-26 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS22650 e943e8a561747a5d246aaacf1f1001a1 497 SUPERFAMILY SSF55874 358 469 5.89E-25 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS22650 e943e8a561747a5d246aaacf1f1001a1 497 SUPERFAMILY SSF47384 212 292 9.22E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS22650 e943e8a561747a5d246aaacf1f1001a1 497 Gene3D G3DSA:1.10.287.130 221 278 1.0E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS21440 00cda1a004b9923bc98e9fbf500580cb 153 SMART SM00347 30 129 9.6E-9 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS21440 00cda1a004b9923bc98e9fbf500580cb 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 6.2E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS21440 00cda1a004b9923bc98e9fbf500580cb 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 6.2E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS21440 00cda1a004b9923bc98e9fbf500580cb 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 6.2E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS21440 00cda1a004b9923bc98e9fbf500580cb 153 Gene3D G3DSA:1.10.10.10 3 144 1.5E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21440 00cda1a004b9923bc98e9fbf500580cb 153 Pfam PF01047 MarR family 50 92 2.3E-11 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS21440 00cda1a004b9923bc98e9fbf500580cb 153 SUPERFAMILY SSF46785 4 140 8.47E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21440 00cda1a004b9923bc98e9fbf500580cb 153 ProSitePatterns PS01117 MarR-type HTH domain signature. 67 101 - T 09-03-2017 IPR023187 Transcriptional regulator MarR-type, conserved site NA29_RS07455 8c5b22c1ebea2542ca6a733fbfcf8e4f 277 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 11 275 2.9E-98 T 09-03-2017 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 NA29_RS07455 8c5b22c1ebea2542ca6a733fbfcf8e4f 277 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 110 275 6.4E-60 T 09-03-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 NA29_RS07455 8c5b22c1ebea2542ca6a733fbfcf8e4f 277 SUPERFAMILY SSF54675 5 109 2.0E-31 T 09-03-2017 NA29_RS07455 8c5b22c1ebea2542ca6a733fbfcf8e4f 277 SUPERFAMILY SSF51690 110 275 2.83E-58 T 09-03-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 NA29_RS07455 8c5b22c1ebea2542ca6a733fbfcf8e4f 277 PIRSF PIRSF006250 3 276 8.5E-92 T 09-03-2017 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 NA29_RS07455 8c5b22c1ebea2542ca6a733fbfcf8e4f 277 Gene3D G3DSA:3.20.20.70 131 265 6.9E-59 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS07455 8c5b22c1ebea2542ca6a733fbfcf8e4f 277 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 19 108 2.5E-26 T 09-03-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 NA29_RS07455 8c5b22c1ebea2542ca6a733fbfcf8e4f 277 Gene3D G3DSA:3.90.1170.20 3 130 1.9E-46 T 09-03-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 NA29_RS03730 5c9f27c2633f210062635bce1b420d0f 570 SUPERFAMILY SSF51569 20 328 6.04E-99 T 09-03-2017 NA29_RS03730 5c9f27c2633f210062635bce1b420d0f 570 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 09-03-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 NA29_RS03730 5c9f27c2633f210062635bce1b420d0f 570 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 5 546 1.1E-237 T 09-03-2017 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 NA29_RS03730 5c9f27c2633f210062635bce1b420d0f 570 Pfam PF00682 HMGL-like 31 309 7.1E-72 T 09-03-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 NA29_RS03730 5c9f27c2633f210062635bce1b420d0f 570 Gene3D G3DSA:3.20.20.70 8 392 2.3E-145 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS03730 5c9f27c2633f210062635bce1b420d0f 570 Pfam PF08502 LeuA allosteric (dimerisation) domain 420 546 1.5E-23 T 09-03-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 NA29_RS03730 5c9f27c2633f210062635bce1b420d0f 570 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 6 548 54.032 T 09-03-2017 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 NA29_RS03730 5c9f27c2633f210062635bce1b420d0f 570 SUPERFAMILY SSF89000 386 435 1.45E-15 T 09-03-2017 NA29_RS03730 5c9f27c2633f210062635bce1b420d0f 570 SUPERFAMILY SSF110921 443 546 1.14E-27 T 09-03-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 NA29_RS03730 5c9f27c2633f210062635bce1b420d0f 570 SMART SM00917 420 547 8.4E-24 T 09-03-2017 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 NA29_RS03730 5c9f27c2633f210062635bce1b420d0f 570 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 09-03-2017 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 NA29_RS21670 38ce450aee75783d6cf0c201cdc7720c 56 Gene3D G3DSA:2.20.28.10 2 55 2.5E-26 T 09-03-2017 IPR004039 Rubredoxin-type fold NA29_RS21670 38ce450aee75783d6cf0c201cdc7720c 56 PRINTS PR00163 Rubredoxin signature 5 21 8.3E-8 T 09-03-2017 IPR024935 Rubredoxin domain GO:0005506 NA29_RS21670 38ce450aee75783d6cf0c201cdc7720c 56 PRINTS PR00163 Rubredoxin signature 35 51 8.3E-8 T 09-03-2017 IPR024935 Rubredoxin domain GO:0005506 NA29_RS21670 38ce450aee75783d6cf0c201cdc7720c 56 SUPERFAMILY SSF57802 2 55 3.53E-23 T 09-03-2017 NA29_RS21670 38ce450aee75783d6cf0c201cdc7720c 56 Pfam PF00301 Rubredoxin 6 51 7.6E-23 T 09-03-2017 IPR024935 Rubredoxin domain GO:0005506 NA29_RS21670 38ce450aee75783d6cf0c201cdc7720c 56 ProSitePatterns PS00202 Rubredoxin signature. 35 45 - T 09-03-2017 IPR018527 Rubredoxin, iron-binding site GO:0046872 NA29_RS21670 38ce450aee75783d6cf0c201cdc7720c 56 PIRSF PIRSF000071 1 56 5.9E-26 T 09-03-2017 IPR024922 Rubredoxin GO:0005506|GO:0009055 NA29_RS13210 60402f9825598a5e5975d3aa09cd394a 756 PIRSF PIRSF006076 1 756 4.5E-258 T 09-03-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 NA29_RS13210 60402f9825598a5e5975d3aa09cd394a 756 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 19 756 3.2E-274 T 09-03-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 NA29_RS13210 60402f9825598a5e5975d3aa09cd394a 756 Pfam PF01103 Surface antigen 443 756 2.4E-73 T 09-03-2017 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 NA29_RS13210 60402f9825598a5e5975d3aa09cd394a 756 Pfam PF07244 Surface antigen variable number repeat 261 339 2.2E-14 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 NA29_RS13210 60402f9825598a5e5975d3aa09cd394a 756 Pfam PF07244 Surface antigen variable number repeat 88 167 6.1E-13 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 NA29_RS13210 60402f9825598a5e5975d3aa09cd394a 756 Pfam PF07244 Surface antigen variable number repeat 342 416 1.2E-13 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 NA29_RS13210 60402f9825598a5e5975d3aa09cd394a 756 Pfam PF07244 Surface antigen variable number repeat 171 258 8.4E-20 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 NA29_RS13210 60402f9825598a5e5975d3aa09cd394a 756 Pfam PF07244 Surface antigen variable number repeat 20 85 8.4E-7 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 NA29_RS13210 60402f9825598a5e5975d3aa09cd394a 756 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 756 25.59 T 09-03-2017 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 NA29_RS23065 dab41ac2087ebc97bbd4bc4d72f9192e 447 Pfam PF00083 Sugar (and other) transporter 35 436 2.0E-21 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS23065 dab41ac2087ebc97bbd4bc4d72f9192e 447 ProSitePatterns PS00217 Sugar transport proteins signature 2. 143 168 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS23065 dab41ac2087ebc97bbd4bc4d72f9192e 447 Gene3D G3DSA:1.20.1250.20 32 243 7.0E-29 T 09-03-2017 NA29_RS23065 dab41ac2087ebc97bbd4bc4d72f9192e 447 Gene3D G3DSA:1.20.1250.20 256 443 4.3E-22 T 09-03-2017 NA29_RS23065 dab41ac2087ebc97bbd4bc4d72f9192e 447 ProSitePatterns PS00216 Sugar transport proteins signature 1. 313 330 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS23065 dab41ac2087ebc97bbd4bc4d72f9192e 447 SUPERFAMILY SSF103473 32 443 3.53E-69 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS17380 21ce5faa4751539c2d81724272e0ec57 164 Pfam PF01042 Endoribonuclease L-PSP 49 158 4.3E-20 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family NA29_RS17380 21ce5faa4751539c2d81724272e0ec57 164 Gene3D G3DSA:3.30.1330.40 33 161 2.6E-29 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS17380 21ce5faa4751539c2d81724272e0ec57 164 SUPERFAMILY SSF55298 31 160 4.87E-26 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS17380 21ce5faa4751539c2d81724272e0ec57 164 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 134 153 - T 09-03-2017 IPR019897 RidA, conserved site NA29_RS20955 90b255ff6d9301f0fdf30184e1c921f8 328 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 240 328 3.8E-33 T 09-03-2017 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 NA29_RS20955 90b255ff6d9301f0fdf30184e1c921f8 328 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 6 328 70.247 T 09-03-2017 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 NA29_RS20955 90b255ff6d9301f0fdf30184e1c921f8 328 Gene3D G3DSA:3.40.47.10 172 327 4.4E-51 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS20955 90b255ff6d9301f0fdf30184e1c921f8 328 SUPERFAMILY SSF53901 8 328 1.72E-69 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS20955 90b255ff6d9301f0fdf30184e1c921f8 328 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 7 328 2.7E-124 T 09-03-2017 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 NA29_RS20955 90b255ff6d9301f0fdf30184e1c921f8 328 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 194 2.4E-35 T 09-03-2017 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 NA29_RS20955 90b255ff6d9301f0fdf30184e1c921f8 328 Gene3D G3DSA:3.40.47.10 7 171 6.3E-66 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS08885 75aad1e651fbaecf84e06f1cff732af5 205 Pfam PF01725 Ham1 family 6 199 1.7E-49 T 09-03-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 NA29_RS08885 75aad1e651fbaecf84e06f1cff732af5 205 Gene3D G3DSA:3.90.950.10 1 201 1.7E-71 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like NA29_RS08885 75aad1e651fbaecf84e06f1cff732af5 205 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 4 203 44.76 T 09-03-2017 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 NA29_RS08885 75aad1e651fbaecf84e06f1cff732af5 205 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 5 201 7.1E-46 T 09-03-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 NA29_RS08885 75aad1e651fbaecf84e06f1cff732af5 205 SUPERFAMILY SSF52972 1 201 2.2E-65 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like NA29_RS03935 9b1cb46629d0095214643c4994636218 322 Gene3D G3DSA:3.40.50.300 9 198 1.4E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03935 9b1cb46629d0095214643c4994636218 322 SUPERFAMILY SSF90002 227 303 1.57E-6 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS03935 9b1cb46629d0095214643c4994636218 322 Gene3D G3DSA:3.30.1220.10 223 302 7.7E-5 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS03935 9b1cb46629d0095214643c4994636218 322 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 227 303 8.2E-10 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS03935 9b1cb46629d0095214643c4994636218 322 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 178 6.1E-42 T 09-03-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain NA29_RS03935 9b1cb46629d0095214643c4994636218 322 SMART SM00833 226 310 3.0E-7 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS03935 9b1cb46629d0095214643c4994636218 322 SUPERFAMILY SSF52540 8 191 6.76E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11945 2ac48488b0b7e1e37e6f91114b9db28e 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 3.8E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11945 2ac48488b0b7e1e37e6f91114b9db28e 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.8E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11945 2ac48488b0b7e1e37e6f91114b9db28e 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 220 3.8E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11945 2ac48488b0b7e1e37e6f91114b9db28e 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 3.8E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11945 2ac48488b0b7e1e37e6f91114b9db28e 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.8E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11945 2ac48488b0b7e1e37e6f91114b9db28e 238 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 197 1.2E-23 T 09-03-2017 NA29_RS11945 2ac48488b0b7e1e37e6f91114b9db28e 238 SUPERFAMILY SSF51735 9 238 1.38E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11945 2ac48488b0b7e1e37e6f91114b9db28e 238 Gene3D G3DSA:3.40.50.720 10 238 1.3E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS25015 51952e0bc3d6b705b5828093992f620f 797 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 113 3.8E-13 T 09-03-2017 IPR000014 PAS domain NA29_RS25015 51952e0bc3d6b705b5828093992f620f 797 Pfam PF08447 PAS fold 31 113 9.0E-14 T 09-03-2017 IPR013655 PAS fold-3 GO:0005515 NA29_RS25015 51952e0bc3d6b705b5828093992f620f 797 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 597 626 4.0E-58 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS25015 51952e0bc3d6b705b5828093992f620f 797 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 472 4.0E-58 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS25015 51952e0bc3d6b705b5828093992f620f 797 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 520 547 4.0E-58 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS25015 51952e0bc3d6b705b5828093992f620f 797 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 549 578 4.0E-58 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS25015 51952e0bc3d6b705b5828093992f620f 797 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 481 668 3.0E-65 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS25015 51952e0bc3d6b705b5828093992f620f 797 Gene3D G3DSA:3.30.450.20 20 113 2.2E-23 T 09-03-2017 NA29_RS25015 51952e0bc3d6b705b5828093992f620f 797 Gene3D G3DSA:1.10.287.950 437 641 1.6E-62 T 09-03-2017 NA29_RS25015 51952e0bc3d6b705b5828093992f620f 797 SUPERFAMILY SSF55785 20 114 4.54E-27 T 09-03-2017 IPR000014 PAS domain NA29_RS25015 51952e0bc3d6b705b5828093992f620f 797 Pfam PF12729 Four helix bundle sensory module for signal transduction 165 341 4.7E-23 T 09-03-2017 IPR024478 4HB MCP domain NA29_RS25015 51952e0bc3d6b705b5828093992f620f 797 SMART SM00091 8 74 1.2E-4 T 09-03-2017 IPR000014 PAS domain NA29_RS25015 51952e0bc3d6b705b5828093992f620f 797 SMART SM00304 369 421 9.3E-5 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS25015 51952e0bc3d6b705b5828093992f620f 797 SMART SM00283 422 669 3.6E-94 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS25015 51952e0bc3d6b705b5828093992f620f 797 Pfam PF00672 HAMP domain 350 416 7.0E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS25015 51952e0bc3d6b705b5828093992f620f 797 SUPERFAMILY SSF58104 389 670 5.1E-75 T 09-03-2017 NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 Gene3D G3DSA:3.30.420.140 331 455 1.4E-48 T 09-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 SUPERFAMILY SSF47781 475 563 6.0E-29 T 09-03-2017 IPR010994 RuvA domain 2-like NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 SUPERFAMILY SSF158832 5 325 1.01E-119 T 09-03-2017 NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 SUPERFAMILY SSF47781 565 637 1.13E-19 T 09-03-2017 IPR010994 RuvA domain 2-like NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 Gene3D G3DSA:2.40.50.140 638 725 6.0E-27 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 Pfam PF00575 S1 RNA binding domain 654 725 4.2E-19 T 09-03-2017 IPR003029 S1 domain GO:0003676 NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 Gene3D G3DSA:1.10.3500.10 114 326 1.5E-102 T 09-03-2017 IPR023323 Tex-like domain NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 Gene3D G3DSA:1.10.3500.10 456 503 1.5E-102 T 09-03-2017 IPR023323 Tex-like domain NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 SMART SM00316 654 725 6.0E-25 T 09-03-2017 IPR022967 RNA-binding domain, S1 NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 Gene3D G3DSA:1.10.10.650 4 113 3.8E-47 T 09-03-2017 IPR023319 Tex-like protein, HTH domain NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 SMART SM00732 330 429 9.6E-33 T 09-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 Gene3D G3DSA:1.10.150.310 504 635 4.2E-46 T 09-03-2017 IPR023097 Tex RuvX-like domain NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 SUPERFAMILY SSF53098 326 474 3.26E-47 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 Pfam PF12836 Helix-hairpin-helix motif 496 560 5.8E-29 T 09-03-2017 NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 Pfam PF09371 Tex-like protein N-terminal domain 13 197 8.6E-72 T 09-03-2017 IPR018974 Tex-like protein, N-terminal NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 Pfam PF16921 Tex protein YqgF-like domain 331 456 1.2E-49 T 09-03-2017 IPR032639 Tex protein, YqgF-like domain NA29_RS09895 717fe88584b38f8a3268e95391e60ecd 784 SUPERFAMILY SSF50249 643 728 2.22E-24 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS09700 4f03daa46e3ed1ce102aa16d2c333c08 544 Pfam PF04262 Glutamate-cysteine ligase 22 393 2.4E-163 T 09-03-2017 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 NA29_RS09700 4f03daa46e3ed1ce102aa16d2c333c08 544 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 544 201.295 T 09-03-2017 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 NA29_RS09700 4f03daa46e3ed1ce102aa16d2c333c08 544 SUPERFAMILY SSF55931 17 531 2.49E-183 T 09-03-2017 NA29_RS09700 4f03daa46e3ed1ce102aa16d2c333c08 544 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 19 534 6.3E-196 T 09-03-2017 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 NA29_RS24760 c36988c49446c6434da48b5634c6183b 219 Pfam PF00072 Response regulator receiver domain 5 117 2.3E-30 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS24760 c36988c49446c6434da48b5634c6183b 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 4.4E-8 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS24760 c36988c49446c6434da48b5634c6183b 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 4.4E-8 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS24760 c36988c49446c6434da48b5634c6183b 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 4.4E-8 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS24760 c36988c49446c6434da48b5634c6183b 219 Gene3D G3DSA:1.10.10.10 122 211 8.0E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS24760 c36988c49446c6434da48b5634c6183b 219 SMART SM00421 147 204 6.2E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS24760 c36988c49446c6434da48b5634c6183b 219 SMART SM00448 3 116 1.2E-31 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS24760 c36988c49446c6434da48b5634c6183b 219 SUPERFAMILY SSF52172 2 134 5.12E-36 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS24760 c36988c49446c6434da48b5634c6183b 219 SUPERFAMILY SSF46894 137 211 6.46E-18 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS24760 c36988c49446c6434da48b5634c6183b 219 Gene3D G3DSA:3.40.50.2300 2 121 2.1E-38 T 09-03-2017 NA29_RS24760 c36988c49446c6434da48b5634c6183b 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 8.6E-14 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS05270 e83d3259514b49ee79b343539bd5fd96 159 Pfam PF10616 Protein of unknown function (DUF2471) 9 127 1.5E-12 T 09-03-2017 IPR018894 Protein of unknown function DUF2471 NA29_RS05040 2a3d4290b7fc2923e361d0ef3390b8a4 870 Gene3D G3DSA:3.40.50.300 627 856 5.2E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05040 2a3d4290b7fc2923e361d0ef3390b8a4 870 Gene3D G3DSA:3.40.50.300 353 594 7.5E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05040 2a3d4290b7fc2923e361d0ef3390b8a4 870 SMART SM00382 652 870 5.7E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS05040 2a3d4290b7fc2923e361d0ef3390b8a4 870 SMART SM00382 379 573 3.9E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS05040 2a3d4290b7fc2923e361d0ef3390b8a4 870 SUPERFAMILY SSF52540 628 860 8.1E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05040 2a3d4290b7fc2923e361d0ef3390b8a4 870 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 575 595 2.0E-8 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS05040 2a3d4290b7fc2923e361d0ef3390b8a4 870 Pfam PF02653 Branched-chain amino acid transport system / permease component 48 308 1.5E-39 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS05040 2a3d4290b7fc2923e361d0ef3390b8a4 870 Pfam PF00005 ABC transporter 643 790 6.0E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS05040 2a3d4290b7fc2923e361d0ef3390b8a4 870 Pfam PF00005 ABC transporter 372 524 1.9E-21 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS05040 2a3d4290b7fc2923e361d0ef3390b8a4 870 SUPERFAMILY SSF52540 355 595 2.0E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05040 2a3d4290b7fc2923e361d0ef3390b8a4 870 ProSitePatterns PS00211 ABC transporters family signature. 763 777 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS19990 c416a3ab937fda1365c05151ecea7c90 407 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 192 405 5.2E-18 T 09-03-2017 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 NA29_RS19990 c416a3ab937fda1365c05151ecea7c90 407 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 76 99 - T 09-03-2017 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 NA29_RS19990 c416a3ab937fda1365c05151ecea7c90 407 Gene3D G3DSA:2.102.10.10 33 145 5.1E-23 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS19990 c416a3ab937fda1365c05151ecea7c90 407 SUPERFAMILY SSF55961 167 405 1.57E-51 T 09-03-2017 NA29_RS19990 c416a3ab937fda1365c05151ecea7c90 407 SUPERFAMILY SSF50022 2 158 1.44E-44 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS19990 c416a3ab937fda1365c05151ecea7c90 407 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 48 63 2.8E-29 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 NA29_RS19990 c416a3ab937fda1365c05151ecea7c90 407 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 69 89 2.8E-29 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 NA29_RS19990 c416a3ab937fda1365c05151ecea7c90 407 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 17 42 2.8E-29 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 NA29_RS19990 c416a3ab937fda1365c05151ecea7c90 407 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 181 203 2.8E-29 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 NA29_RS19990 c416a3ab937fda1365c05151ecea7c90 407 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 90 110 2.8E-29 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 NA29_RS19990 c416a3ab937fda1365c05151ecea7c90 407 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 142 168 2.8E-29 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 NA29_RS19990 c416a3ab937fda1365c05151ecea7c90 407 Pfam PF00355 Rieske [2Fe-2S] domain 33 119 9.0E-20 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS19990 c416a3ab937fda1365c05151ecea7c90 407 Gene3D G3DSA:3.90.380.10 146 406 8.3E-64 T 09-03-2017 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 NA29_RS05860 1d4a64556ec8983dad397f20ff40eb4e 414 Pfam PF01904 Protein of unknown function DUF72 126 400 3.4E-40 T 09-03-2017 IPR002763 Protein of unknown function DUF72 NA29_RS05860 1d4a64556ec8983dad397f20ff40eb4e 414 SUPERFAMILY SSF117396 102 402 3.01E-46 T 09-03-2017 IPR002763 Protein of unknown function DUF72 NA29_RS05860 1d4a64556ec8983dad397f20ff40eb4e 414 Gene3D G3DSA:3.20.20.410 92 402 2.6E-64 T 09-03-2017 IPR002763 Protein of unknown function DUF72 NA29_RS11620 3bc04d90d5c15817e11fa107f1c2bbd5 274 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 8 217 4.1E-37 T 09-03-2017 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 NA29_RS11620 3bc04d90d5c15817e11fa107f1c2bbd5 274 SUPERFAMILY SSF51621 6 227 2.48E-64 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS11620 3bc04d90d5c15817e11fa107f1c2bbd5 274 PIRSF PIRSF015582 1 274 6.1E-80 T 09-03-2017 IPR011206 Citrate lyase beta subunit-like NA29_RS11620 3bc04d90d5c15817e11fa107f1c2bbd5 274 Gene3D G3DSA:3.20.20.60 4 228 8.2E-73 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS07610 8fa98af0f7b289511f1cdfd66fc5e5be 302 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 76 287 3.8E-65 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS07610 8fa98af0f7b289511f1cdfd66fc5e5be 302 Gene3D G3DSA:3.90.850.10 73 288 8.4E-74 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS07610 8fa98af0f7b289511f1cdfd66fc5e5be 302 SUPERFAMILY SSF56529 71 287 5.23E-71 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS23855 2060d31fa52f76653200901ab1368447 275 SMART SM01383 42 118 1.2E-45 T 09-03-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23855 2060d31fa52f76653200901ab1368447 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 6.7E-33 T 09-03-2017 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23855 2060d31fa52f76653200901ab1368447 275 Gene3D G3DSA:2.30.30.30 118 195 9.7E-33 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 NA29_RS23855 2060d31fa52f76653200901ab1368447 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 09-03-2017 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23855 2060d31fa52f76653200901ab1368447 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 2.3E-129 T 09-03-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23855 2060d31fa52f76653200901ab1368447 275 PIRSF PIRSF002158 10 275 2.3E-101 T 09-03-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23855 2060d31fa52f76653200901ab1368447 275 SMART SM01382 124 252 2.3E-89 T 09-03-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 NA29_RS23855 2060d31fa52f76653200901ab1368447 275 SUPERFAMILY SSF50104 127 272 1.75E-60 T 09-03-2017 IPR008991 Translation protein SH3-like domain NA29_RS23855 2060d31fa52f76653200901ab1368447 275 SUPERFAMILY SSF50249 3 125 1.82E-48 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS23855 2060d31fa52f76653200901ab1368447 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.598 T 09-03-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23855 2060d31fa52f76653200901ab1368447 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 2.3E-56 T 09-03-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 NA29_RS23855 2060d31fa52f76653200901ab1368447 275 Gene3D G3DSA:2.40.50.140 1 114 6.2E-49 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS23855 2060d31fa52f76653200901ab1368447 275 Gene3D G3DSA:4.10.950.10 196 273 1.0E-34 T 09-03-2017 IPR014726 Ribosomal protein L2, domain 3 NA29_RS09145 a5421acd3e1cee75ab21f79d0d4a8297 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 09-03-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS09145 a5421acd3e1cee75ab21f79d0d4a8297 89 Pfam PF00312 Ribosomal protein S15 8 88 9.6E-38 T 09-03-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS09145 a5421acd3e1cee75ab21f79d0d4a8297 89 SMART SM01387 8 88 2.7E-52 T 09-03-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS09145 a5421acd3e1cee75ab21f79d0d4a8297 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 2.0E-27 T 09-03-2017 NA29_RS09145 a5421acd3e1cee75ab21f79d0d4a8297 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 89 22.604 T 09-03-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS09145 a5421acd3e1cee75ab21f79d0d4a8297 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 4.1E-39 T 09-03-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS09145 a5421acd3e1cee75ab21f79d0d4a8297 89 Gene3D G3DSA:1.10.287.10 6 89 4.2E-39 T 09-03-2017 IPR009068 S15/NS1, RNA-binding NA29_RS09145 a5421acd3e1cee75ab21f79d0d4a8297 89 SUPERFAMILY SSF47060 6 89 6.18E-35 T 09-03-2017 IPR009068 S15/NS1, RNA-binding NA29_RS14985 e1da25ee618bdb69dc7e00e2ba6b27f1 151 Pfam PF01575 MaoC like domain 13 115 7.8E-18 T 09-03-2017 IPR002539 MaoC-like domain NA29_RS14985 e1da25ee618bdb69dc7e00e2ba6b27f1 151 Gene3D G3DSA:3.10.129.10 5 150 1.2E-44 T 09-03-2017 IPR029069 HotDog domain NA29_RS14985 e1da25ee618bdb69dc7e00e2ba6b27f1 151 SUPERFAMILY SSF54637 1 150 5.09E-40 T 09-03-2017 IPR029069 HotDog domain NA29_RS25220 4dcd1a48fd7057154e9ef0de13ddd983 429 Gene3D G3DSA:1.20.1250.20 240 424 3.5E-22 T 09-03-2017 NA29_RS25220 4dcd1a48fd7057154e9ef0de13ddd983 429 Gene3D G3DSA:1.20.1250.20 16 225 1.3E-28 T 09-03-2017 NA29_RS25220 4dcd1a48fd7057154e9ef0de13ddd983 429 ProSitePatterns PS00216 Sugar transport proteins signature 1. 295 312 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS25220 4dcd1a48fd7057154e9ef0de13ddd983 429 Pfam PF07690 Major Facilitator Superfamily 25 385 1.0E-32 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS25220 4dcd1a48fd7057154e9ef0de13ddd983 429 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS25220 4dcd1a48fd7057154e9ef0de13ddd983 429 ProSitePatterns PS00217 Sugar transport proteins signature 2. 129 154 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS25220 4dcd1a48fd7057154e9ef0de13ddd983 429 SUPERFAMILY SSF103473 14 425 3.79E-69 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS09910 a3595b885c7fb4a45b0b1fb11bf5c226 743 SUPERFAMILY SSF52540 54 146 1.02E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09910 a3595b885c7fb4a45b0b1fb11bf5c226 743 SUPERFAMILY SSF52540 223 280 1.02E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09910 a3595b885c7fb4a45b0b1fb11bf5c226 743 SUPERFAMILY SSF52540 666 704 1.02E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09910 a3595b885c7fb4a45b0b1fb11bf5c226 743 SUPERFAMILY SSF52540 549 716 3.2E-10 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09910 a3595b885c7fb4a45b0b1fb11bf5c226 743 Gene3D G3DSA:3.40.50.300 222 272 1.5E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09910 a3595b885c7fb4a45b0b1fb11bf5c226 743 Gene3D G3DSA:3.40.50.300 50 147 1.5E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09910 a3595b885c7fb4a45b0b1fb11bf5c226 743 SMART SM00491 577 707 2.6E-38 T 09-03-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 NA29_RS09910 a3595b885c7fb4a45b0b1fb11bf5c226 743 Pfam PF13307 Helicase C-terminal domain 558 720 1.8E-32 T 09-03-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 NA29_RS09910 a3595b885c7fb4a45b0b1fb11bf5c226 743 Gene3D G3DSA:3.40.50.300 561 715 1.1E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09320 1597716856899e50a07f6487712221cd 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS09320 1597716856899e50a07f6487712221cd 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 1.1E-40 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09320 1597716856899e50a07f6487712221cd 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.1E-40 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09320 1597716856899e50a07f6487712221cd 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.1E-40 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09320 1597716856899e50a07f6487712221cd 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.1E-40 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09320 1597716856899e50a07f6487712221cd 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.1E-40 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09320 1597716856899e50a07f6487712221cd 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.1E-40 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09320 1597716856899e50a07f6487712221cd 263 Pfam PF00106 short chain dehydrogenase 5 203 4.1E-54 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09320 1597716856899e50a07f6487712221cd 263 SUPERFAMILY SSF51735 2 262 2.14E-72 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS09320 1597716856899e50a07f6487712221cd 263 Gene3D G3DSA:3.40.50.720 2 262 2.0E-78 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS09320 1597716856899e50a07f6487712221cd 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.2E-12 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09320 1597716856899e50a07f6487712221cd 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.2E-12 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09320 1597716856899e50a07f6487712221cd 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.2E-12 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09320 1597716856899e50a07f6487712221cd 263 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 263 6.0E-110 T 09-03-2017 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 NA29_RS17405 d0d6dfa66f945172d67add6f098f6467 253 Gene3D G3DSA:3.40.225.10 15 225 5.8E-61 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS17405 d0d6dfa66f945172d67add6f098f6467 253 SMART SM01007 21 201 2.1E-58 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS17405 d0d6dfa66f945172d67add6f098f6467 253 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 22 201 5.3E-46 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS17405 d0d6dfa66f945172d67add6f098f6467 253 SUPERFAMILY SSF53639 14 226 1.88E-60 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS03145 028e2b98b4995baac07f4f920e6833de 170 Pfam PF09423 PhoD-like phosphatase 3 138 4.6E-21 T 09-03-2017 IPR018946 Alkaline phosphatase D-related NA29_RS03145 028e2b98b4995baac07f4f920e6833de 170 SUPERFAMILY SSF56300 6 146 2.66E-5 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 SUPERFAMILY SSF63380 801 916 6.81E-21 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 SUPERFAMILY SSF54292 1051 1152 2.88E-22 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 Pfam PF01568 Molydopterin dinucleotide binding domain 662 782 2.1E-22 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 SMART SM00926 3 56 5.6E-10 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 Gene3D G3DSA:2.40.40.20 639 789 2.6E-23 T 09-03-2017 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 Pfam PF00175 Oxidoreductase NAD-binding domain 929 1039 3.7E-12 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 SUPERFAMILY SSF53706 4 646 6.41E-146 T 09-03-2017 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 Gene3D G3DSA:3.40.50.80 921 1057 6.3E-30 T 09-03-2017 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 Gene3D G3DSA:3.40.50.740 407 632 2.6E-53 T 09-03-2017 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 Gene3D G3DSA:3.40.50.740 61 143 2.6E-53 T 09-03-2017 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 6 56 3.0E-6 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 Gene3D G3DSA:2.20.25.90 5 60 3.3E-14 T 09-03-2017 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 Gene3D G3DSA:2.40.30.10 800 917 3.2E-22 T 09-03-2017 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 Gene3D G3DSA:3.10.20.30 1058 1152 1.3E-20 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 SUPERFAMILY SSF52343 918 1058 1.1E-30 T 09-03-2017 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 Pfam PF00384 Molybdopterin oxidoreductase 59 560 3.1E-43 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 1087 1145 1.8E-10 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 Gene3D G3DSA:3.40.228.10 147 260 2.7E-55 T 09-03-2017 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 Gene3D G3DSA:3.40.228.10 329 406 2.7E-55 T 09-03-2017 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 Pfam PF00970 Oxidoreductase FAD-binding domain 830 915 3.9E-5 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 NA29_RS17100 a0ec77b1e1f03333e117407ca36c6442 1153 SUPERFAMILY SSF50692 659 789 4.07E-26 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain NA29_RS10925 9763f44c953180c7873908296e3b27d3 229 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 4.2E-13 T 09-03-2017 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 NA29_RS10925 9763f44c953180c7873908296e3b27d3 229 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 229 45.348 T 09-03-2017 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 NA29_RS10925 9763f44c953180c7873908296e3b27d3 229 SMART SM00702 1 177 1.4E-19 T 09-03-2017 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 NA29_RS02245 c20342e3d2b8b48e2efa8bc193bb2f40 276 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 100 234 5.0E-13 T 09-03-2017 IPR005586 ABC-type transport auxiliary lipoprotein component NA29_RS02245 c20342e3d2b8b48e2efa8bc193bb2f40 276 Gene3D G3DSA:3.40.50.10610 82 243 2.4E-31 T 09-03-2017 IPR005586 ABC-type transport auxiliary lipoprotein component NA29_RS02245 c20342e3d2b8b48e2efa8bc193bb2f40 276 SUPERFAMILY SSF159594 100 241 1.02E-26 T 09-03-2017 NA29_RS02160 789195211367ed2b92fbc182a8e388a1 383 Gene3D G3DSA:3.40.50.2300 24 218 5.4E-42 T 09-03-2017 NA29_RS02160 789195211367ed2b92fbc182a8e388a1 383 SUPERFAMILY SSF53822 25 381 8.64E-69 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS02160 789195211367ed2b92fbc182a8e388a1 383 Pfam PF13458 Periplasmic binding protein 24 371 3.7E-50 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS05780 f130e574a3d587846350f676bd6a9f05 156 SUPERFAMILY SSF46785 12 151 2.4E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05780 f130e574a3d587846350f676bd6a9f05 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 94 6.1E-5 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS05780 f130e574a3d587846350f676bd6a9f05 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 98 114 6.1E-5 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS05780 f130e574a3d587846350f676bd6a9f05 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 128 148 6.1E-5 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS05780 f130e574a3d587846350f676bd6a9f05 156 SMART SM00347 38 138 9.0E-12 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS05780 f130e574a3d587846350f676bd6a9f05 156 Gene3D G3DSA:1.10.10.10 11 152 1.6E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05780 f130e574a3d587846350f676bd6a9f05 156 Pfam PF01047 MarR family 49 102 1.3E-8 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS05420 bab485c1f16b209308ba97a7ab744a0f 158 Gene3D G3DSA:3.30.70.920 67 140 8.0E-21 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS05420 bab485c1f16b209308ba97a7ab744a0f 158 SUPERFAMILY SSF46785 2 59 2.42E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05420 bab485c1f16b209308ba97a7ab744a0f 158 SMART SM00344 3 112 1.6E-26 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NA29_RS05420 bab485c1f16b209308ba97a7ab744a0f 158 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 5.2E-21 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS05420 bab485c1f16b209308ba97a7ab744a0f 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 4.0E-14 T 09-03-2017 NA29_RS05420 bab485c1f16b209308ba97a7ab744a0f 158 SUPERFAMILY SSF54909 67 147 1.61E-19 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS05420 bab485c1f16b209308ba97a7ab744a0f 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 2.5E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS05420 bab485c1f16b209308ba97a7ab744a0f 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 2.5E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS05420 bab485c1f16b209308ba97a7ab744a0f 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 2.5E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS05420 bab485c1f16b209308ba97a7ab744a0f 158 Gene3D G3DSA:1.10.10.10 2 54 1.1E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS09545 4809e5db2972e1448d29c767c7886258 804 SMART SM00304 315 367 3.4E-11 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS09545 4809e5db2972e1448d29c767c7886258 804 Pfam PF00563 EAL domain 549 783 7.1E-76 T 09-03-2017 IPR001633 EAL domain NA29_RS09545 4809e5db2972e1448d29c767c7886258 804 Gene3D G3DSA:3.30.70.270 375 537 2.3E-53 T 09-03-2017 NA29_RS09545 4809e5db2972e1448d29c767c7886258 804 Pfam PF00990 Diguanylate cyclase, GGDEF domain 373 526 6.6E-42 T 09-03-2017 IPR000160 GGDEF domain NA29_RS09545 4809e5db2972e1448d29c767c7886258 804 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 371 527 2.5E-38 T 09-03-2017 IPR000160 GGDEF domain NA29_RS09545 4809e5db2972e1448d29c767c7886258 804 Pfam PF00672 HAMP domain 295 362 7.2E-15 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS09545 4809e5db2972e1448d29c767c7886258 804 Gene3D G3DSA:3.20.20.450 547 797 5.0E-99 T 09-03-2017 IPR001633 EAL domain NA29_RS09545 4809e5db2972e1448d29c767c7886258 804 SUPERFAMILY SSF141868 549 797 3.4E-91 T 09-03-2017 IPR001633 EAL domain NA29_RS09545 4809e5db2972e1448d29c767c7886258 804 SUPERFAMILY SSF103190 60 193 6.28E-5 T 09-03-2017 IPR029151 Periplasmic sensor domain-like NA29_RS09545 4809e5db2972e1448d29c767c7886258 804 SUPERFAMILY SSF55073 378 528 2.2E-44 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS09545 4809e5db2972e1448d29c767c7886258 804 SMART SM00052 543 788 1.1E-114 T 09-03-2017 IPR001633 EAL domain NA29_RS09545 4809e5db2972e1448d29c767c7886258 804 Pfam PF14827 Double sensory domain of two-component sensor kinase 42 263 6.0E-15 T 09-03-2017 IPR029150 Double Cache domain 3 NA29_RS09545 4809e5db2972e1448d29c767c7886258 804 SUPERFAMILY SSF158472 315 364 2.62E-10 T 09-03-2017 NA29_RS09545 4809e5db2972e1448d29c767c7886258 804 SMART SM00267 362 533 1.9E-56 T 09-03-2017 IPR000160 GGDEF domain NA29_RS21435 1b13a30873f9f9181f6c31f85ffec609 891 PIRSF PIRSF000156 1 891 0.0 T 09-03-2017 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 NA29_RS21435 1b13a30873f9f9181f6c31f85ffec609 891 SUPERFAMILY SSF52922 702 889 1.13E-57 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NA29_RS21435 1b13a30873f9f9181f6c31f85ffec609 891 Gene3D G3DSA:3.40.50.970 59 468 2.5E-144 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS21435 1b13a30873f9f9181f6c31f85ffec609 891 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 142 297 1.1E-6 T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 NA29_RS21435 1b13a30873f9f9181f6c31f85ffec609 891 SUPERFAMILY SSF52518 474 701 1.47E-93 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS21435 1b13a30873f9f9181f6c31f85ffec609 891 Gene3D G3DSA:3.40.50.920 708 889 6.0E-72 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NA29_RS21435 1b13a30873f9f9181f6c31f85ffec609 891 SUPERFAMILY SSF52518 60 468 2.76E-130 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS21435 1b13a30873f9f9181f6c31f85ffec609 891 Gene3D G3DSA:3.40.50.970 473 705 1.7E-114 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS21435 1b13a30873f9f9181f6c31f85ffec609 891 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 10 889 0.0 T 09-03-2017 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 NA29_RS15965 40ba512b23c38ca1d1edad8761b27f6d 430 SUPERFAMILY SSF52964 35 160 8.76E-31 T 09-03-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 NA29_RS15965 40ba512b23c38ca1d1edad8761b27f6d 430 Gene3D G3DSA:2.130.10.10 151 427 5.3E-75 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NA29_RS15965 40ba512b23c38ca1d1edad8761b27f6d 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 268 4.8E-9 T 09-03-2017 IPR011659 WD40-like Beta Propeller NA29_RS15965 40ba512b23c38ca1d1edad8761b27f6d 430 Pfam PF07676 WD40-like Beta Propeller Repeat 192 224 1.0E-6 T 09-03-2017 IPR011659 WD40-like Beta Propeller NA29_RS15965 40ba512b23c38ca1d1edad8761b27f6d 430 Pfam PF07676 WD40-like Beta Propeller Repeat 371 395 0.024 T 09-03-2017 IPR011659 WD40-like Beta Propeller NA29_RS15965 40ba512b23c38ca1d1edad8761b27f6d 430 Pfam PF07676 WD40-like Beta Propeller Repeat 324 356 7.2E-6 T 09-03-2017 IPR011659 WD40-like Beta Propeller NA29_RS15965 40ba512b23c38ca1d1edad8761b27f6d 430 Pfam PF07676 WD40-like Beta Propeller Repeat 276 311 5.7E-13 T 09-03-2017 IPR011659 WD40-like Beta Propeller NA29_RS15965 40ba512b23c38ca1d1edad8761b27f6d 430 Gene3D G3DSA:3.40.50.10070 30 150 9.8E-39 T 09-03-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 NA29_RS15965 40ba512b23c38ca1d1edad8761b27f6d 430 Pfam PF04052 TolB amino-terminal domain 30 127 1.2E-23 T 09-03-2017 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 NA29_RS15965 40ba512b23c38ca1d1edad8761b27f6d 430 Hamap MF_00671 Protein TolB [tolB]. 11 425 33.488 T 09-03-2017 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 NA29_RS15965 40ba512b23c38ca1d1edad8761b27f6d 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 22 426 1.2E-151 T 09-03-2017 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 NA29_RS15965 40ba512b23c38ca1d1edad8761b27f6d 430 SUPERFAMILY SSF69304 154 427 2.35E-57 T 09-03-2017 NA29_RS23865 afdbb0159d7e3e5d0df56f7c9c4dc950 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.515 T 09-03-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23865 afdbb0159d7e3e5d0df56f7c9c4dc950 206 SUPERFAMILY SSF52166 1 205 9.16E-67 T 09-03-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 NA29_RS23865 afdbb0159d7e3e5d0df56f7c9c4dc950 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 203 7.0E-68 T 09-03-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23865 afdbb0159d7e3e5d0df56f7c9c4dc950 206 Pfam PF00573 Ribosomal protein L4/L1 family 19 203 1.3E-59 T 09-03-2017 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 NA29_RS23865 afdbb0159d7e3e5d0df56f7c9c4dc950 206 Gene3D G3DSA:3.40.1370.10 58 205 4.6E-51 T 09-03-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 NA29_RS25110 14ef18e8afd62123a804b2e8948ac116 374 Pfam PF03600 Citrate transporter 11 309 9.3E-22 T 09-03-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 NA29_RS18640 3f4bb69a7dad11b5fd9408d0184643b5 464 PIRSF PIRSF002808 2 428 1.5E-39 T 09-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 NA29_RS18640 3f4bb69a7dad11b5fd9408d0184643b5 464 Gene3D G3DSA:1.20.1250.20 227 414 4.6E-29 T 09-03-2017 NA29_RS18640 3f4bb69a7dad11b5fd9408d0184643b5 464 Pfam PF07690 Major Facilitator Superfamily 19 378 1.1E-57 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS18640 3f4bb69a7dad11b5fd9408d0184643b5 464 Gene3D G3DSA:1.20.1250.20 11 202 2.7E-52 T 09-03-2017 NA29_RS18640 3f4bb69a7dad11b5fd9408d0184643b5 464 SUPERFAMILY SSF103473 7 420 1.22E-90 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS06935 4643fd5eb1f1b2db626ff783a73fe66a 242 TIGRFAM TIGR00035 asp_race: aspartate racemase 6 236 5.1E-39 T 09-03-2017 IPR004380 Aspartate racemase GO:0006520|GO:0016855 NA29_RS06935 4643fd5eb1f1b2db626ff783a73fe66a 242 Gene3D G3DSA:3.40.50.1860 124 210 2.8E-18 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS06935 4643fd5eb1f1b2db626ff783a73fe66a 242 Gene3D G3DSA:3.40.50.1860 5 115 2.1E-38 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS06935 4643fd5eb1f1b2db626ff783a73fe66a 242 SUPERFAMILY SSF53681 123 233 8.34E-17 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS06935 4643fd5eb1f1b2db626ff783a73fe66a 242 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 82 90 - T 09-03-2017 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS06935 4643fd5eb1f1b2db626ff783a73fe66a 242 SUPERFAMILY SSF53681 6 114 6.54E-29 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS06935 4643fd5eb1f1b2db626ff783a73fe66a 242 Pfam PF01177 Asp/Glu/Hydantoin racemase 10 230 1.2E-50 T 09-03-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS17575 131367d3e4301a366d549fa632c2afef 406 Pfam PF03616 Sodium/glutamate symporter 9 373 2.0E-146 T 09-03-2017 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 NA29_RS17575 131367d3e4301a366d549fa632c2afef 406 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 9 404 4.5E-169 T 09-03-2017 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 NA29_RS18600 084692227ce14299cf8750d3138e2d6d 368 Pfam PF07993 Male sterility protein 5 236 3.5E-32 T 09-03-2017 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 NA29_RS18600 084692227ce14299cf8750d3138e2d6d 368 SUPERFAMILY SSF51735 1 286 3.26E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18600 084692227ce14299cf8750d3138e2d6d 368 SUPERFAMILY SSF51735 317 334 3.26E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18600 084692227ce14299cf8750d3138e2d6d 368 Gene3D G3DSA:3.40.50.720 1 275 3.3E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS03265 36c4a324a4f7eff6068beb3744508324 295 SUPERFAMILY SSF46689 181 232 1.97E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS03265 36c4a324a4f7eff6068beb3744508324 295 Gene3D G3DSA:1.10.10.60 236 283 1.3E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS03265 36c4a324a4f7eff6068beb3744508324 295 Pfam PF12833 Helix-turn-helix domain 204 279 5.3E-19 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS03265 36c4a324a4f7eff6068beb3744508324 295 Gene3D G3DSA:1.10.10.60 179 235 2.3E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS03265 36c4a324a4f7eff6068beb3744508324 295 SUPERFAMILY SSF46689 234 285 1.7E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS03265 36c4a324a4f7eff6068beb3744508324 295 Pfam PF06719 AraC-type transcriptional regulator N-terminus 18 168 1.0E-45 T 09-03-2017 IPR009594 Transcription regulator HTH, AraC, N-terminal NA29_RS03265 36c4a324a4f7eff6068beb3744508324 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 235 277 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS03265 36c4a324a4f7eff6068beb3744508324 295 SMART SM00342 198 281 1.1E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS06555 ad7ba4247f5cf9fdb2aa7002022e0003 504 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS06555 ad7ba4247f5cf9fdb2aa7002022e0003 504 SUPERFAMILY SSF53720 17 492 1.7E-157 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS06555 ad7ba4247f5cf9fdb2aa7002022e0003 504 Gene3D G3DSA:3.40.605.10 22 277 2.1E-86 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS06555 ad7ba4247f5cf9fdb2aa7002022e0003 504 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS06555 ad7ba4247f5cf9fdb2aa7002022e0003 504 Pfam PF00171 Aldehyde dehydrogenase family 34 489 3.1E-162 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS06555 ad7ba4247f5cf9fdb2aa7002022e0003 504 Gene3D G3DSA:3.40.309.10 278 464 5.9E-65 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS05290 0bfbc25e30e7965c8c96452341a9b99d 212 SUPERFAMILY SSF48008 76 207 3.4E-24 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS05290 0bfbc25e30e7965c8c96452341a9b99d 212 Pfam PF07729 FCD domain 79 200 9.6E-23 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS05290 0bfbc25e30e7965c8c96452341a9b99d 212 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 65 2.2E-12 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS05290 0bfbc25e30e7965c8c96452341a9b99d 212 Gene3D G3DSA:1.20.120.530 76 209 3.1E-25 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS05290 0bfbc25e30e7965c8c96452341a9b99d 212 SMART SM00895 78 201 4.8E-20 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS05290 0bfbc25e30e7965c8c96452341a9b99d 212 SMART SM00345 12 68 1.8E-6 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS05290 0bfbc25e30e7965c8c96452341a9b99d 212 Gene3D G3DSA:1.10.10.10 8 66 2.4E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05290 0bfbc25e30e7965c8c96452341a9b99d 212 SUPERFAMILY SSF46785 11 72 3.81E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21465 80d2ec33084ce7985f9136cb70106e59 1006 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 568 1006 5.7E-67 T 09-03-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 NA29_RS21465 80d2ec33084ce7985f9136cb70106e59 1006 Gene3D G3DSA:2.160.20.20 223 674 3.6E-25 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS21465 80d2ec33084ce7985f9136cb70106e59 1006 Pfam PF03212 Pertactin 581 672 3.8E-7 T 09-03-2017 IPR004899 Pertactin, central region NA29_RS21465 80d2ec33084ce7985f9136cb70106e59 1006 Pfam PF03797 Autotransporter beta-domain 724 987 6.0E-34 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS21465 80d2ec33084ce7985f9136cb70106e59 1006 SUPERFAMILY SSF103515 690 1006 3.66E-39 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS21465 80d2ec33084ce7985f9136cb70106e59 1006 SMART SM00869 726 993 5.2E-29 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS21465 80d2ec33084ce7985f9136cb70106e59 1006 Gene3D G3DSA:2.40.128.130 682 1006 1.6E-55 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS21465 80d2ec33084ce7985f9136cb70106e59 1006 SUPERFAMILY SSF51126 226 673 2.32E-23 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS22180 6e34edac335e640df3162b9b848cb6e5 290 SUPERFAMILY SSF51735 112 284 1.66E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22180 6e34edac335e640df3162b9b848cb6e5 290 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 17 99 1.3E-24 T 09-03-2017 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 NA29_RS22180 6e34edac335e640df3162b9b848cb6e5 290 Gene3D G3DSA:3.40.192.10 11 115 5.0E-37 T 09-03-2017 NA29_RS22180 6e34edac335e640df3162b9b848cb6e5 290 SUPERFAMILY SSF53223 10 111 6.91E-31 T 09-03-2017 NA29_RS22180 6e34edac335e640df3162b9b848cb6e5 290 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 12 284 30.764 T 09-03-2017 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 NA29_RS22180 6e34edac335e640df3162b9b848cb6e5 290 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 127 205 1.3E-7 T 09-03-2017 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase NA29_RS22180 6e34edac335e640df3162b9b848cb6e5 290 Gene3D G3DSA:3.40.50.720 116 286 4.4E-42 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22180 6e34edac335e640df3162b9b848cb6e5 290 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 15 286 1.9E-75 T 09-03-2017 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 NA29_RS16765 d4a989c17cca2f0b9a03a87d250f7a63 242 Gene3D G3DSA:2.60.40.360 25 143 1.4E-16 T 09-03-2017 IPR008962 PapD-like NA29_RS16765 d4a989c17cca2f0b9a03a87d250f7a63 242 SUPERFAMILY SSF49354 19 143 1.67E-24 T 09-03-2017 IPR008962 PapD-like NA29_RS16765 d4a989c17cca2f0b9a03a87d250f7a63 242 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 144 1.3E-21 T 09-03-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 NA29_RS04685 8811bf9943386b40ef336d659e77bc64 266 SUPERFAMILY SSF46689 179 226 5.38E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS04685 8811bf9943386b40ef336d659e77bc64 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 195 210 5.1E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS04685 8811bf9943386b40ef336d659e77bc64 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 210 226 5.1E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS04685 8811bf9943386b40ef336d659e77bc64 266 SMART SM00342 143 226 9.5E-28 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS04685 8811bf9943386b40ef336d659e77bc64 266 Gene3D G3DSA:1.10.10.60 180 226 1.9E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS04685 8811bf9943386b40ef336d659e77bc64 266 Pfam PF12833 Helix-turn-helix domain 149 226 5.5E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS04685 8811bf9943386b40ef336d659e77bc64 266 Gene3D G3DSA:1.10.10.60 131 179 2.8E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS04685 8811bf9943386b40ef336d659e77bc64 266 SUPERFAMILY SSF46689 132 177 4.17E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS04685 8811bf9943386b40ef336d659e77bc64 266 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 180 222 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS03800 08738f0e42e525b020ea76fb4f60167a 459 Gene3D G3DSA:1.20.1250.20 21 195 2.9E-33 T 09-03-2017 NA29_RS03800 08738f0e42e525b020ea76fb4f60167a 459 SUPERFAMILY SSF103473 8 429 5.62E-78 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS03800 08738f0e42e525b020ea76fb4f60167a 459 Pfam PF07690 Major Facilitator Superfamily 27 334 5.4E-35 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS03800 08738f0e42e525b020ea76fb4f60167a 459 Gene3D G3DSA:1.20.1250.20 253 428 1.1E-23 T 09-03-2017 NA29_RS10005 000b53f63048be67ca4ef4d924f450a2 186 Pfam PF00857 Isochorismatase family 10 166 4.7E-22 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS10005 000b53f63048be67ca4ef4d924f450a2 186 Gene3D G3DSA:3.40.50.850 8 184 8.3E-32 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS10005 000b53f63048be67ca4ef4d924f450a2 186 SUPERFAMILY SSF52499 7 185 4.06E-32 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS05810 07fc3be003903399682a6aa903438f57 248 Pfam PF01614 Bacterial transcriptional regulator 126 243 2.6E-14 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS05810 07fc3be003903399682a6aa903438f57 248 Gene3D G3DSA:3.30.450.40 76 247 1.8E-39 T 09-03-2017 IPR029016 GAF domain-like NA29_RS05810 07fc3be003903399682a6aa903438f57 248 Gene3D G3DSA:1.10.10.10 8 75 6.0E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05810 07fc3be003903399682a6aa903438f57 248 Pfam PF09339 IclR helix-turn-helix domain 11 58 3.4E-11 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS05810 07fc3be003903399682a6aa903438f57 248 SUPERFAMILY SSF55781 74 247 1.57E-35 T 09-03-2017 IPR029016 GAF domain-like NA29_RS05810 07fc3be003903399682a6aa903438f57 248 SUPERFAMILY SSF46785 10 77 1.56E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06510 24145bbb2622fe450977f3d683f3618e 415 SUPERFAMILY SSF53383 8 415 4.92E-184 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS06510 24145bbb2622fe450977f3d683f3618e 415 Gene3D G3DSA:3.90.1150.10 284 415 5.9E-58 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS06510 24145bbb2622fe450977f3d683f3618e 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 8 415 52.846 T 09-03-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 NA29_RS06510 24145bbb2622fe450977f3d683f3618e 415 Gene3D G3DSA:3.40.640.10 38 283 2.1E-107 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS06510 24145bbb2622fe450977f3d683f3618e 415 PIRSF PIRSF000412 1 415 4.2E-170 T 09-03-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 NA29_RS06510 24145bbb2622fe450977f3d683f3618e 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 09-03-2017 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 NA29_RS06510 24145bbb2622fe450977f3d683f3618e 415 Pfam PF00464 Serine hydroxymethyltransferase 10 384 7.6E-178 T 09-03-2017 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 NA29_RS02405 7aaebb8917a9053342e41408f224e32a 312 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 310 1.5E-122 T 09-03-2017 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 NA29_RS02405 7aaebb8917a9053342e41408f224e32a 312 SUPERFAMILY SSF56059 123 309 2.08E-57 T 09-03-2017 NA29_RS02405 7aaebb8917a9053342e41408f224e32a 312 Gene3D G3DSA:3.30.470.20 191 299 2.7E-44 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS02405 7aaebb8917a9053342e41408f224e32a 312 Gene3D G3DSA:3.40.50.20 1 128 1.1E-47 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS02405 7aaebb8917a9053342e41408f224e32a 312 Hamap MF_00162 Glutathione synthetase [gshB]. 1 312 154.184 T 09-03-2017 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 NA29_RS02405 7aaebb8917a9053342e41408f224e32a 312 Gene3D G3DSA:3.30.1490.20 136 190 3.6E-28 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NA29_RS02405 7aaebb8917a9053342e41408f224e32a 312 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 123 296 2.1E-70 T 09-03-2017 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 NA29_RS02405 7aaebb8917a9053342e41408f224e32a 312 SUPERFAMILY SSF52440 1 121 8.92E-40 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS02405 7aaebb8917a9053342e41408f224e32a 312 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 119 3.6E-43 T 09-03-2017 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 NA29_RS22800 821eb53ddbfdaa0264da27db59594b7f 360 Gene3D G3DSA:1.20.58.410 8 93 1.5E-19 T 09-03-2017 NA29_RS22800 821eb53ddbfdaa0264da27db59594b7f 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.908 T 09-03-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 NA29_RS22800 821eb53ddbfdaa0264da27db59594b7f 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 356 2.8E-164 T 09-03-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 NA29_RS22800 821eb53ddbfdaa0264da27db59594b7f 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 09-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 NA29_RS22800 821eb53ddbfdaa0264da27db59594b7f 360 SUPERFAMILY SSF75620 12 353 7.06E-139 T 09-03-2017 NA29_RS22800 821eb53ddbfdaa0264da27db59594b7f 360 Pfam PF00472 RF-1 domain 214 321 1.3E-43 T 09-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 NA29_RS22800 821eb53ddbfdaa0264da27db59594b7f 360 Pfam PF03462 PCRF domain 13 203 9.6E-73 T 09-03-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 NA29_RS22800 821eb53ddbfdaa0264da27db59594b7f 360 Gene3D G3DSA:3.30.160.20 213 289 3.9E-37 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain NA29_RS22800 821eb53ddbfdaa0264da27db59594b7f 360 SMART SM00937 63 178 1.7E-65 T 09-03-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 NA29_RS21910 805c822e22eec3996ef9040f1384545d 373 SUPERFAMILY SSF52540 29 55 8.13E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS21910 805c822e22eec3996ef9040f1384545d 373 SUPERFAMILY SSF52540 136 315 8.13E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS21910 805c822e22eec3996ef9040f1384545d 373 Pfam PF02562 PhoH-like protein 138 340 8.3E-94 T 09-03-2017 IPR003714 PhoH-like protein GO:0005524 NA29_RS21910 805c822e22eec3996ef9040f1384545d 373 Gene3D G3DSA:3.40.50.300 138 339 1.0E-88 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23700 ca4749949d7cfc8fd1dfccd4ba51bbe0 394 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 141 392 9.3E-79 T 09-03-2017 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 NA29_RS23700 ca4749949d7cfc8fd1dfccd4ba51bbe0 394 Pfam PF01578 Cytochrome C assembly protein 171 389 1.6E-49 T 09-03-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 NA29_RS08310 09fa4b5ccf533d5ac31edeb7e1d7223e 274 Pfam PF13714 Phosphoenolpyruvate phosphomutase 12 249 1.2E-68 T 09-03-2017 NA29_RS08310 09fa4b5ccf533d5ac31edeb7e1d7223e 274 Gene3D G3DSA:3.20.20.60 5 231 1.6E-63 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS08310 09fa4b5ccf533d5ac31edeb7e1d7223e 274 SUPERFAMILY SSF51621 3 256 1.36E-63 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS20315 fbe705d79e499ddb3986f60c91f2ae77 220 Gene3D G3DSA:1.10.10.10 121 218 2.4E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20315 fbe705d79e499ddb3986f60c91f2ae77 220 SMART SM00862 144 217 9.0E-23 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS20315 fbe705d79e499ddb3986f60c91f2ae77 220 SMART SM00448 1 111 1.4E-34 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS20315 fbe705d79e499ddb3986f60c91f2ae77 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 217 3.5E-21 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS20315 fbe705d79e499ddb3986f60c91f2ae77 220 Gene3D G3DSA:3.40.50.2300 1 120 1.4E-36 T 09-03-2017 NA29_RS20315 fbe705d79e499ddb3986f60c91f2ae77 220 Pfam PF00072 Response regulator receiver domain 3 111 1.4E-23 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS20315 fbe705d79e499ddb3986f60c91f2ae77 220 SUPERFAMILY SSF52172 1 177 4.7E-37 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 Pfam PF13187 4Fe-4S dicluster domain 20 64 3.6E-7 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 49 60 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 186 196 6.5E-19 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 281 300 6.5E-19 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 375 383 6.5E-19 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 309 318 6.5E-19 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 351 367 6.5E-19 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 6.5E-19 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 245 254 6.5E-19 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 Gene3D G3DSA:2.40.30.10 137 266 1.5E-42 T 09-03-2017 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 TIGRFAM TIGR03224 benzo_boxA: benzoyl-CoA oxygenase/reductase, BoxA protein 9 421 8.4E-224 T 09-03-2017 IPR017634 Benzoyl-CoA oxygenase/reductase, BoxA protein KEGG: 00361+1.14.13.20|MetaCyc: PWY-6085|MetaCyc: PWY-6086 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 SUPERFAMILY SSF54862 14 68 3.29E-18 T 09-03-2017 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 Gene3D G3DSA:3.40.50.80 268 420 6.5E-35 T 09-03-2017 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 Pfam PF00175 Oxidoreductase NAD-binding domain 282 388 1.2E-13 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 20 31 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 SUPERFAMILY SSF52343 270 421 4.85E-34 T 09-03-2017 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 SUPERFAMILY SSF63380 133 274 6.24E-38 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 Pfam PF00970 Oxidoreductase FAD-binding domain 166 269 6.6E-6 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 PIRSF PIRSF501177 1 421 3.0E-220 T 09-03-2017 IPR017634 Benzoyl-CoA oxygenase/reductase, BoxA protein KEGG: 00361+1.14.13.20|MetaCyc: PWY-6085|MetaCyc: PWY-6086 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 Gene3D G3DSA:3.30.70.20 14 67 1.4E-17 T 09-03-2017 NA29_RS06485 e7766ad2792688fdccb6b4e1be29d7b6 421 PIRSF PIRSF000361 129 421 9.8E-70 T 09-03-2017 IPR015701 Ferredoxin--NADP reductase GO:0016491|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 NA29_RS01345 6887b5b16effb200cd6a1519604eaec0 306 Gene3D G3DSA:1.10.3720.10 95 300 2.0E-27 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01345 6887b5b16effb200cd6a1519604eaec0 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 303 2.0E-33 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01345 6887b5b16effb200cd6a1519604eaec0 306 SUPERFAMILY SSF161098 97 284 4.47E-28 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01345 6887b5b16effb200cd6a1519604eaec0 306 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 73 7.0E-10 T 09-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain NA29_RS22015 9a5a5de54f27f7aa48b3914c99a55664 342 PIRSF PIRSF006621 1 329 1.2E-109 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 NA29_RS22015 9a5a5de54f27f7aa48b3914c99a55664 342 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 09-03-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 NA29_RS22015 9a5a5de54f27f7aa48b3914c99a55664 342 Gene3D G3DSA:1.10.1200.80 254 328 8.2E-28 T 09-03-2017 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 NA29_RS22015 9a5a5de54f27f7aa48b3914c99a55664 342 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 323 50.264 T 09-03-2017 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 NA29_RS22015 9a5a5de54f27f7aa48b3914c99a55664 342 Gene3D G3DSA:3.20.20.70 7 244 6.5E-83 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS22015 9a5a5de54f27f7aa48b3914c99a55664 342 Pfam PF01207 Dihydrouridine synthase (Dus) 14 321 5.9E-106 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 NA29_RS22015 9a5a5de54f27f7aa48b3914c99a55664 342 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 321 2.4E-125 T 09-03-2017 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 NA29_RS22015 9a5a5de54f27f7aa48b3914c99a55664 342 SUPERFAMILY SSF51395 10 321 1.46E-90 T 09-03-2017 NA29_RS01670 a31273a9aa369ffdf1ede3d845d3a13c 390 PIRSF PIRSF029171 9 389 7.7E-101 T 09-03-2017 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 NA29_RS01670 a31273a9aa369ffdf1ede3d845d3a13c 390 Gene3D G3DSA:3.40.50.1820 289 378 1.8E-21 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS01670 a31273a9aa369ffdf1ede3d845d3a13c 390 Gene3D G3DSA:3.40.50.1820 78 224 1.8E-21 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS01670 a31273a9aa369ffdf1ede3d845d3a13c 390 SUPERFAMILY SSF53474 79 367 3.95E-26 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS01670 a31273a9aa369ffdf1ede3d845d3a13c 390 Pfam PF03583 Secretory lipase 120 214 2.8E-13 T 09-03-2017 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 NA29_RS11565 f53a4996e9c7eaaa63d4f9a9f61a14ff 328 Pfam PF09084 NMT1/THI5 like 70 250 3.0E-14 T 09-03-2017 IPR015168 SsuA/THI5-like NA29_RS11565 f53a4996e9c7eaaa63d4f9a9f61a14ff 328 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 35 0.0013 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NA29_RS11565 f53a4996e9c7eaaa63d4f9a9f61a14ff 328 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 43 326 1.2E-66 T 09-03-2017 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 NA29_RS11565 f53a4996e9c7eaaa63d4f9a9f61a14ff 328 SUPERFAMILY SSF53850 39 268 3.71E-48 T 09-03-2017 NA29_RS11565 f53a4996e9c7eaaa63d4f9a9f61a14ff 328 Gene3D G3DSA:3.40.190.10 66 140 3.8E-5 T 09-03-2017 NA29_RS11565 f53a4996e9c7eaaa63d4f9a9f61a14ff 328 Gene3D G3DSA:3.40.190.10 141 247 2.6E-29 T 09-03-2017 NA29_RS11565 f53a4996e9c7eaaa63d4f9a9f61a14ff 328 SMART SM00062 41 259 7.4E-10 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS03635 13f9f806363693a2cf0617d4e76925dd 139 Pfam PF01638 HxlR-like helix-turn-helix 23 108 1.6E-31 T 09-03-2017 IPR002577 Helix-turn-helix, HxlR type NA29_RS03635 13f9f806363693a2cf0617d4e76925dd 139 Gene3D G3DSA:1.10.10.10 8 110 6.8E-42 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03635 13f9f806363693a2cf0617d4e76925dd 139 SUPERFAMILY SSF46785 9 109 1.54E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00875 de8014d7d39fe36d80eb9576aba78583 165 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 21 44 1.1E-11 T 09-03-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 NA29_RS00875 de8014d7d39fe36d80eb9576aba78583 165 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 102 124 1.1E-11 T 09-03-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 NA29_RS00875 de8014d7d39fe36d80eb9576aba78583 165 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 70 92 1.1E-11 T 09-03-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 NA29_RS00875 de8014d7d39fe36d80eb9576aba78583 165 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 46 65 1.1E-11 T 09-03-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 NA29_RS00875 de8014d7d39fe36d80eb9576aba78583 165 SUPERFAMILY SSF48452 36 132 1.47E-11 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS00875 de8014d7d39fe36d80eb9576aba78583 165 TIGRFAM TIGR02552 LcrH_SycD: type III secretion low calcium response chaperone LcrH/SycD 20 148 6.6E-37 T 09-03-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 NA29_RS00875 de8014d7d39fe36d80eb9576aba78583 165 Gene3D G3DSA:1.25.40.10 36 132 2.6E-9 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS00875 de8014d7d39fe36d80eb9576aba78583 165 PIRSF PIRSF003165 1 159 2.1E-56 T 09-03-2017 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup NA29_RS00875 de8014d7d39fe36d80eb9576aba78583 165 Pfam PF07720 Tetratricopeptide repeat 69 102 2.8E-8 T 09-03-2017 IPR011716 Tetratricopeptide TPR-3 NA29_RS00875 de8014d7d39fe36d80eb9576aba78583 165 Pfam PF07720 Tetratricopeptide repeat 35 68 9.6E-10 T 09-03-2017 IPR011716 Tetratricopeptide TPR-3 NA29_RS23070 53b21fd9f3c9b3337a7b167f3eccd81c 290 Pfam PF03466 LysR substrate binding domain 89 274 4.6E-28 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS23070 53b21fd9f3c9b3337a7b167f3eccd81c 290 SUPERFAMILY SSF53850 90 288 9.31E-27 T 09-03-2017 NA29_RS23070 53b21fd9f3c9b3337a7b167f3eccd81c 290 SUPERFAMILY SSF46785 3 86 2.96E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS23070 53b21fd9f3c9b3337a7b167f3eccd81c 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.5E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS23070 53b21fd9f3c9b3337a7b167f3eccd81c 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.1E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS23070 53b21fd9f3c9b3337a7b167f3eccd81c 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.1E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS23070 53b21fd9f3c9b3337a7b167f3eccd81c 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.1E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS23070 53b21fd9f3c9b3337a7b167f3eccd81c 290 Gene3D G3DSA:3.40.190.10 193 257 5.7E-10 T 09-03-2017 NA29_RS23070 53b21fd9f3c9b3337a7b167f3eccd81c 290 Gene3D G3DSA:3.40.190.10 89 192 4.0E-19 T 09-03-2017 NA29_RS23070 53b21fd9f3c9b3337a7b167f3eccd81c 290 Gene3D G3DSA:1.10.10.10 3 86 1.8E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01635 58ff8313bf940b2ca99d70327d549379 441 Gene3D G3DSA:1.10.3080.10 19 402 5.8E-49 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 NA29_RS01635 58ff8313bf940b2ca99d70327d549379 441 SUPERFAMILY SSF81340 13 404 3.53E-83 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 NA29_RS01635 58ff8313bf940b2ca99d70327d549379 441 Pfam PF00654 Voltage gated chloride channel 60 394 1.4E-62 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS01635 58ff8313bf940b2ca99d70327d549379 441 PRINTS PR00762 Chloride channel signature 152 171 2.1E-8 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS01635 58ff8313bf940b2ca99d70327d549379 441 PRINTS PR00762 Chloride channel signature 101 120 2.1E-8 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS01635 58ff8313bf940b2ca99d70327d549379 441 PRINTS PR00762 Chloride channel signature 317 337 2.1E-8 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS04015 bacab9915c9db67757c43669706ec255 393 Gene3D G3DSA:3.40.50.10540 303 393 1.1E-113 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS04015 bacab9915c9db67757c43669706ec255 393 Gene3D G3DSA:3.40.50.10540 2 214 1.1E-113 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS04015 bacab9915c9db67757c43669706ec255 393 Pfam PF02515 CoA-transferase family III 4 370 3.1E-119 T 09-03-2017 IPR003673 CoA-transferase family III GO:0003824 NA29_RS04015 bacab9915c9db67757c43669706ec255 393 Gene3D G3DSA:3.30.1540.10 220 302 1.3E-27 T 09-03-2017 NA29_RS04015 bacab9915c9db67757c43669706ec255 393 SUPERFAMILY SSF89796 1 393 1.57E-135 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS00155 35393bed2d9fb49408e4dd7636f9f251 301 SUPERFAMILY SSF46785 6 111 3.99E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00155 35393bed2d9fb49408e4dd7636f9f251 301 Gene3D G3DSA:3.40.190.10 92 178 3.0E-20 T 09-03-2017 NA29_RS00155 35393bed2d9fb49408e4dd7636f9f251 301 Gene3D G3DSA:1.10.10.10 4 86 8.6E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00155 35393bed2d9fb49408e4dd7636f9f251 301 Gene3D G3DSA:3.40.190.10 179 266 1.3E-18 T 09-03-2017 NA29_RS00155 35393bed2d9fb49408e4dd7636f9f251 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 7.9E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00155 35393bed2d9fb49408e4dd7636f9f251 301 SUPERFAMILY SSF53850 90 299 3.1E-39 T 09-03-2017 NA29_RS00155 35393bed2d9fb49408e4dd7636f9f251 301 Pfam PF03466 LysR substrate binding domain 88 298 1.9E-38 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS16005 b2e33df0e8e8623ad2ea981a3e1cc81c 336 Pfam PF00107 Zinc-binding dehydrogenase 164 262 8.5E-26 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NA29_RS16005 b2e33df0e8e8623ad2ea981a3e1cc81c 336 SMART SM00829 23 334 8.9E-30 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NA29_RS16005 b2e33df0e8e8623ad2ea981a3e1cc81c 336 Gene3D G3DSA:3.90.180.10 16 160 3.6E-37 T 09-03-2017 IPR011032 GroES-like NA29_RS16005 b2e33df0e8e8623ad2ea981a3e1cc81c 336 Gene3D G3DSA:3.40.50.720 161 263 9.3E-30 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16005 b2e33df0e8e8623ad2ea981a3e1cc81c 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 41 99 1.2E-8 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NA29_RS16005 b2e33df0e8e8623ad2ea981a3e1cc81c 336 SUPERFAMILY SSF51735 127 288 9.18E-44 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16005 b2e33df0e8e8623ad2ea981a3e1cc81c 336 SUPERFAMILY SSF50129 19 157 8.67E-33 T 09-03-2017 IPR011032 GroES-like NA29_RS16005 b2e33df0e8e8623ad2ea981a3e1cc81c 336 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 153 174 - T 09-03-2017 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 Pfam PF00873 AcrB/AcrD/AcrF family 6 1036 1.1E-237 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 SUPERFAMILY SSF82714 185 269 3.14E-19 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 Gene3D G3DSA:1.10.3850.10 277 507 4.6E-64 T 09-03-2017 NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 Gene3D G3DSA:1.10.3850.10 813 1039 2.6E-44 T 09-03-2017 NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 SUPERFAMILY SSF82693 45 126 8.11E-20 T 09-03-2017 NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1045 0.0 T 09-03-2017 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 3.1E-24 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 3.1E-24 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 3.1E-24 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.1E-24 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 3.1E-24 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 3.1E-24 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 SUPERFAMILY SSF82714 723 806 1.96E-17 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 SUPERFAMILY SSF82866 294 505 1.24E-37 T 09-03-2017 NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 Gene3D G3DSA:3.30.2090.10 724 807 2.0E-18 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 Gene3D G3DSA:3.30.2090.10 185 269 4.3E-19 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 Gene3D G3DSA:3.30.70.1430 45 140 7.3E-24 T 09-03-2017 NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 SUPERFAMILY SSF82693 271 328 5.75E-21 T 09-03-2017 NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 SUPERFAMILY SSF82693 137 184 5.75E-21 T 09-03-2017 NA29_RS13660 ed25b0651885eeb767434bd1906d59b8 1080 SUPERFAMILY SSF82866 806 1042 5.89E-43 T 09-03-2017 NA29_RS04610 59b976393c84fda8448711536f81d4be 321 Gene3D G3DSA:3.40.50.720 4 114 1.9E-28 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS04610 59b976393c84fda8448711536f81d4be 321 Gene3D G3DSA:3.40.50.720 115 291 9.3E-69 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS04610 59b976393c84fda8448711536f81d4be 321 SUPERFAMILY SSF51735 101 289 5.74E-60 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS04610 59b976393c84fda8448711536f81d4be 321 SUPERFAMILY SSF52283 3 134 1.29E-26 T 09-03-2017 NA29_RS04610 59b976393c84fda8448711536f81d4be 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 288 5.6E-63 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NA29_RS04610 59b976393c84fda8448711536f81d4be 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 320 1.3E-25 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 NA29_RS04610 59b976393c84fda8448711536f81d4be 321 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 227 243 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NA29_RS17860 743f27851f928c74d7aaf77ebe0a2d6f 222 Gene3D G3DSA:3.30.1330.60 96 218 1.4E-35 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS17860 743f27851f928c74d7aaf77ebe0a2d6f 222 PRINTS PR01021 OMPA domain signature 155 171 1.7E-19 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NA29_RS17860 743f27851f928c74d7aaf77ebe0a2d6f 222 PRINTS PR01021 OMPA domain signature 110 132 1.7E-19 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NA29_RS17860 743f27851f928c74d7aaf77ebe0a2d6f 222 PRINTS PR01021 OMPA domain signature 140 155 1.7E-19 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NA29_RS17860 743f27851f928c74d7aaf77ebe0a2d6f 222 SUPERFAMILY SSF103088 98 217 3.53E-32 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS17860 743f27851f928c74d7aaf77ebe0a2d6f 222 Pfam PF00691 OmpA family 109 194 1.4E-20 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS01490 dc0e722d832e9d10bed16b083d23e5fc 220 SUPERFAMILY SSF160467 5 95 1.11E-12 T 09-03-2017 NA29_RS01490 dc0e722d832e9d10bed16b083d23e5fc 220 SMART SM00796 4 205 6.5E-97 T 09-03-2017 IPR003833 Carboxyltransferase domain, subdomain C and D NA29_RS01490 dc0e722d832e9d10bed16b083d23e5fc 220 SUPERFAMILY SSF50891 91 218 1.44E-44 T 09-03-2017 IPR029000 Cyclophilin-like domain NA29_RS01490 dc0e722d832e9d10bed16b083d23e5fc 220 Gene3D G3DSA:3.30.1360.40 5 82 3.6E-13 T 09-03-2017 IPR024946 Arginine repressor C-terminal-like domain NA29_RS01490 dc0e722d832e9d10bed16b083d23e5fc 220 Gene3D G3DSA:2.40.100.10 91 214 4.9E-49 T 09-03-2017 IPR029000 Cyclophilin-like domain NA29_RS01490 dc0e722d832e9d10bed16b083d23e5fc 220 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 213 6.0E-75 T 09-03-2017 IPR010016 KipI family NA29_RS01490 dc0e722d832e9d10bed16b083d23e5fc 220 Pfam PF02682 Allophanate hydrolase subunit 1 5 205 3.9E-71 T 09-03-2017 IPR003833 Carboxyltransferase domain, subdomain C and D NA29_RS13040 47022de167fcdd07bd2b79cddf033282 478 Gene3D G3DSA:2.20.200.10 98 137 9.7E-10 T 09-03-2017 NA29_RS13040 47022de167fcdd07bd2b79cddf033282 478 Gene3D G3DSA:2.20.200.10 312 340 9.7E-10 T 09-03-2017 NA29_RS13040 47022de167fcdd07bd2b79cddf033282 478 Pfam PF02321 Outer membrane efflux protein 281 460 2.6E-19 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS13040 47022de167fcdd07bd2b79cddf033282 478 Pfam PF02321 Outer membrane efflux protein 61 249 3.0E-23 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS13040 47022de167fcdd07bd2b79cddf033282 478 Gene3D G3DSA:1.20.1600.10 349 463 1.0E-86 T 09-03-2017 NA29_RS13040 47022de167fcdd07bd2b79cddf033282 478 Gene3D G3DSA:1.20.1600.10 138 311 1.0E-86 T 09-03-2017 NA29_RS13040 47022de167fcdd07bd2b79cddf033282 478 Gene3D G3DSA:1.20.1600.10 51 87 1.0E-86 T 09-03-2017 NA29_RS13040 47022de167fcdd07bd2b79cddf033282 478 SUPERFAMILY SSF56954 52 467 4.05E-93 T 09-03-2017 NA29_RS13040 47022de167fcdd07bd2b79cddf033282 478 SUPERFAMILY SSF56954 5 28 4.05E-93 T 09-03-2017 NA29_RS13040 47022de167fcdd07bd2b79cddf033282 478 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 7 462 2.3E-101 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 Gene3D G3DSA:1.20.1640.10 285 498 6.9E-58 T 09-03-2017 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 SUPERFAMILY SSF82693 793 837 7.06E-11 T 09-03-2017 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 SUPERFAMILY SSF82693 666 706 7.06E-11 T 09-03-2017 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.6E-78 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.6E-78 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.6E-78 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.6E-78 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.6E-78 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 1.6E-78 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.6E-78 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.6E-78 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 1.6E-78 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 Pfam PF00873 AcrB/AcrD/AcrF family 5 1013 0.0 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 SUPERFAMILY SSF82714 183 266 6.93E-17 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 Gene3D G3DSA:1.10.3850.10 798 1015 1.5E-55 T 09-03-2017 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 SUPERFAMILY SSF82693 40 134 2.56E-23 T 09-03-2017 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 Gene3D G3DSA:3.30.70.1430 40 141 3.4E-30 T 09-03-2017 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 SUPERFAMILY SSF82693 136 182 6.45E-22 T 09-03-2017 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 SUPERFAMILY SSF82693 268 324 6.45E-22 T 09-03-2017 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 SUPERFAMILY SSF82693 556 653 1.15E-13 T 09-03-2017 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 Gene3D G3DSA:3.30.70.1430 559 647 3.0E-7 T 09-03-2017 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 SUPERFAMILY SSF82714 708 790 1.28E-16 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 SUPERFAMILY SSF82866 816 1015 1.7E-44 T 09-03-2017 NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 Gene3D G3DSA:3.30.2090.10 183 265 6.2E-18 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 Gene3D G3DSA:3.30.2090.10 708 789 7.7E-17 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS19645 67c5a87455ca3a888a51b9673294ebea 1061 SUPERFAMILY SSF82866 290 491 1.7E-47 T 09-03-2017 NA29_RS20355 efc868f2cc10bac034e69981066da975 181 Gene3D G3DSA:3.90.20.20 29 122 1.0E-28 T 09-03-2017 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 NA29_RS20355 efc868f2cc10bac034e69981066da975 181 SUPERFAMILY SSF51064 125 179 3.53E-17 T 09-03-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 NA29_RS20355 efc868f2cc10bac034e69981066da975 181 Gene3D G3DSA:2.30.22.10 125 180 5.2E-25 T 09-03-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 NA29_RS20355 efc868f2cc10bac034e69981066da975 181 Pfam PF01025 GrpE 23 178 1.2E-49 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 NA29_RS20355 efc868f2cc10bac034e69981066da975 181 Hamap MF_01151 Protein GrpE [grpE]. 2 179 19.801 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 NA29_RS20355 efc868f2cc10bac034e69981066da975 181 PRINTS PR00773 GrpE protein signature 52 68 6.5E-27 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 NA29_RS20355 efc868f2cc10bac034e69981066da975 181 PRINTS PR00773 GrpE protein signature 158 177 6.5E-27 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 NA29_RS20355 efc868f2cc10bac034e69981066da975 181 PRINTS PR00773 GrpE protein signature 80 95 6.5E-27 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 NA29_RS20355 efc868f2cc10bac034e69981066da975 181 PRINTS PR00773 GrpE protein signature 132 147 6.5E-27 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 NA29_RS20355 efc868f2cc10bac034e69981066da975 181 SUPERFAMILY SSF58014 31 122 2.48E-24 T 09-03-2017 NA29_RS20355 efc868f2cc10bac034e69981066da975 181 ProSitePatterns PS01071 grpE protein signature. 135 177 - T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 NA29_RS08250 8b5597b72e527308e1a3df1b7c48119d 305 Gene3D G3DSA:3.40.50.300 1 220 1.7E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08250 8b5597b72e527308e1a3df1b7c48119d 305 SUPERFAMILY SSF52540 2 221 8.61E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08250 8b5597b72e527308e1a3df1b7c48119d 305 Pfam PF00005 ABC transporter 17 158 2.2E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS08250 8b5597b72e527308e1a3df1b7c48119d 305 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS08250 8b5597b72e527308e1a3df1b7c48119d 305 SMART SM00382 25 204 1.7E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS02255 d42cab5673eb2d04100642d42ffdbf4e 508 Pfam PF07690 Major Facilitator Superfamily 18 389 2.3E-33 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS02255 d42cab5673eb2d04100642d42ffdbf4e 508 Gene3D G3DSA:1.20.1250.20 264 380 2.4E-7 T 09-03-2017 NA29_RS02255 d42cab5673eb2d04100642d42ffdbf4e 508 Gene3D G3DSA:1.20.1250.20 8 194 4.9E-20 T 09-03-2017 NA29_RS02255 d42cab5673eb2d04100642d42ffdbf4e 508 SUPERFAMILY SSF103473 250 422 1.83E-39 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS02255 d42cab5673eb2d04100642d42ffdbf4e 508 SUPERFAMILY SSF103473 481 505 1.83E-39 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS02255 d42cab5673eb2d04100642d42ffdbf4e 508 SUPERFAMILY SSF103473 7 195 1.83E-39 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS04490 5873027561d855d51a6bec50a43a9849 302 SUPERFAMILY SSF53850 8 269 9.06E-62 T 09-03-2017 NA29_RS04490 5873027561d855d51a6bec50a43a9849 302 SMART SM00062 36 268 1.8E-51 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS04490 5873027561d855d51a6bec50a43a9849 302 Gene3D G3DSA:3.40.190.10 34 120 1.1E-28 T 09-03-2017 NA29_RS04490 5873027561d855d51a6bec50a43a9849 302 Gene3D G3DSA:3.40.190.10 229 269 1.1E-28 T 09-03-2017 NA29_RS04490 5873027561d855d51a6bec50a43a9849 302 Gene3D G3DSA:3.40.190.10 121 228 1.8E-28 T 09-03-2017 NA29_RS04490 5873027561d855d51a6bec50a43a9849 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 266 1.4E-46 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 Gene3D G3DSA:3.40.50.300 4 204 5.6E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.0E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.0E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.0E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 1.0E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.0E-14 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 SMART SM00838 400 485 0.0024 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 SUPERFAMILY SSF50447 151 301 7.57E-30 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 Gene3D G3DSA:3.30.70.870 306 401 1.7E-37 T 09-03-2017 NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 Pfam PF00009 Elongation factor Tu GTP binding domain 5 195 2.5E-56 T 09-03-2017 NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 SUPERFAMILY SSF52540 4 206 3.7E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 SUPERFAMILY SSF54980 304 389 9.59E-13 T 09-03-2017 IPR009022 Elongation factor G, III-V domain NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 Gene3D G3DSA:3.30.70.240 402 480 9.4E-32 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 134 7.8E-24 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 SUPERFAMILY SSF54980 400 515 6.23E-29 T 09-03-2017 IPR009022 Elongation factor G, III-V domain NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 Pfam PF00679 Elongation factor G C-terminus 399 479 1.9E-22 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 Gene3D G3DSA:2.40.30.10 205 305 4.5E-24 T 09-03-2017 NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 601 8.2E-290 T 09-03-2017 IPR006298 GTP-binding protein TypA GO:0005525 NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 Gene3D G3DSA:2.40.50.250 485 579 1.1E-41 T 09-03-2017 NA29_RS13685 27a2389e0d33a987b738fcb5aa50a2a9 607 Pfam PF03144 Elongation factor Tu domain 2 219 291 3.9E-8 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 NA29_RS08725 e8bd6ca1c2d7cf07767de258708bac2f 320 Gene3D G3DSA:3.40.50.2300 12 137 1.0E-38 T 09-03-2017 NA29_RS08725 e8bd6ca1c2d7cf07767de258708bac2f 320 Pfam PF00072 Response regulator receiver domain 16 127 6.9E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS08725 e8bd6ca1c2d7cf07767de258708bac2f 320 SUPERFAMILY SSF52172 11 137 1.28E-38 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS08725 e8bd6ca1c2d7cf07767de258708bac2f 320 Gene3D G3DSA:1.10.10.10 256 313 5.0E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08725 e8bd6ca1c2d7cf07767de258708bac2f 320 Pfam PF00196 Bacterial regulatory proteins, luxR family 257 311 3.0E-15 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS08725 e8bd6ca1c2d7cf07767de258708bac2f 320 SMART SM00421 254 311 3.0E-18 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS08725 e8bd6ca1c2d7cf07767de258708bac2f 320 SUPERFAMILY SSF46894 250 313 2.55E-15 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS08725 e8bd6ca1c2d7cf07767de258708bac2f 320 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 257 271 2.0E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS08725 e8bd6ca1c2d7cf07767de258708bac2f 320 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 287 299 2.0E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS08725 e8bd6ca1c2d7cf07767de258708bac2f 320 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 271 287 2.0E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS08725 e8bd6ca1c2d7cf07767de258708bac2f 320 SMART SM00448 14 127 2.7E-37 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 SUPERFAMILY SSF63380 99 197 2.33E-19 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 233 242 4.1E-19 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 145 152 4.1E-19 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 192 201 4.1E-19 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 298 306 4.1E-19 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 129 141 4.1E-19 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 208 227 4.1E-19 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 80 2.1E-13 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 SUPERFAMILY SSF54292 4 89 1.97E-22 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 Gene3D G3DSA:3.40.50.80 202 331 5.3E-43 T 09-03-2017 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 Gene3D G3DSA:3.10.20.30 9 89 3.9E-23 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 Gene3D G3DSA:2.40.30.10 101 197 2.5E-19 T 09-03-2017 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 129 139 7.2E-11 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 145 152 7.2E-11 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 208 227 7.2E-11 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 233 242 7.2E-11 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 298 306 7.2E-11 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 Pfam PF00175 Oxidoreductase NAD-binding domain 209 311 1.5E-27 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 Pfam PF00970 Oxidoreductase FAD-binding domain 102 199 1.2E-9 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 NA29_RS07650 0453748f3047c0a99ac179bffde2dd51 342 SUPERFAMILY SSF52343 202 332 9.95E-42 T 09-03-2017 NA29_RS00300 6a1c66d112b856ca988f0d6735a57eeb 287 Gene3D G3DSA:3.40.190.10 90 172 3.6E-17 T 09-03-2017 NA29_RS00300 6a1c66d112b856ca988f0d6735a57eeb 287 SUPERFAMILY SSF46785 1 85 2.97E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00300 6a1c66d112b856ca988f0d6735a57eeb 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00300 6a1c66d112b856ca988f0d6735a57eeb 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00300 6a1c66d112b856ca988f0d6735a57eeb 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00300 6a1c66d112b856ca988f0d6735a57eeb 287 SUPERFAMILY SSF53850 90 286 3.93E-38 T 09-03-2017 NA29_RS00300 6a1c66d112b856ca988f0d6735a57eeb 287 Gene3D G3DSA:3.40.190.10 173 255 2.1E-25 T 09-03-2017 NA29_RS00300 6a1c66d112b856ca988f0d6735a57eeb 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.1E-24 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00300 6a1c66d112b856ca988f0d6735a57eeb 287 Pfam PF03466 LysR substrate binding domain 89 283 6.1E-41 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS00300 6a1c66d112b856ca988f0d6735a57eeb 287 Gene3D G3DSA:1.10.10.10 1 84 1.4E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18980 8b1b73d8216ea386997e6d0c8c1f78c6 493 Gene3D G3DSA:3.40.640.10 151 368 2.9E-51 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS18980 8b1b73d8216ea386997e6d0c8c1f78c6 493 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 1.2E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS18980 8b1b73d8216ea386997e6d0c8c1f78c6 493 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 1.2E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS18980 8b1b73d8216ea386997e6d0c8c1f78c6 493 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 86 1.6E-12 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS18980 8b1b73d8216ea386997e6d0c8c1f78c6 493 SUPERFAMILY SSF53383 125 480 2.63E-75 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS18980 8b1b73d8216ea386997e6d0c8c1f78c6 493 Gene3D G3DSA:1.10.10.10 19 87 2.0E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18980 8b1b73d8216ea386997e6d0c8c1f78c6 493 SUPERFAMILY SSF46785 18 88 1.59E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18980 8b1b73d8216ea386997e6d0c8c1f78c6 493 SMART SM00345 27 86 1.8E-11 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS20310 1287e9c287de2a3e9784412ca877292e 455 SMART SM00388 238 303 1.3E-7 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS20310 1287e9c287de2a3e9784412ca877292e 455 Gene3D G3DSA:3.30.565.10 288 454 3.1E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS20310 1287e9c287de2a3e9784412ca877292e 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 453 1.4E-15 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS20310 1287e9c287de2a3e9784412ca877292e 455 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 295 4.0E-7 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS20310 1287e9c287de2a3e9784412ca877292e 455 Pfam PF08521 Two-component sensor kinase N-terminal 22 160 5.2E-29 T 09-03-2017 IPR013727 Two-component sensor kinase, N-terminal NA29_RS20310 1287e9c287de2a3e9784412ca877292e 455 Gene3D G3DSA:1.10.287.130 230 287 1.1E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS20310 1287e9c287de2a3e9784412ca877292e 455 SUPERFAMILY SSF47384 221 299 1.39E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS20310 1287e9c287de2a3e9784412ca877292e 455 SUPERFAMILY SSF55874 293 453 5.37E-30 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS20310 1287e9c287de2a3e9784412ca877292e 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 6.8E-7 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS20310 1287e9c287de2a3e9784412ca877292e 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 6.8E-7 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS20310 1287e9c287de2a3e9784412ca877292e 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 6.8E-7 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS20310 1287e9c287de2a3e9784412ca877292e 455 SMART SM00387 348 455 4.6E-17 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS02790 ea93f1a1f488d52ad1598f39c81bedd5 251 SUPERFAMILY SSF100950 77 232 8.72E-28 T 09-03-2017 NA29_RS02790 ea93f1a1f488d52ad1598f39c81bedd5 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 09-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 NA29_RS02790 ea93f1a1f488d52ad1598f39c81bedd5 251 SUPERFAMILY SSF46785 4 58 9.12E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS02790 ea93f1a1f488d52ad1598f39c81bedd5 251 SMART SM01134 71 232 9.1E-58 T 09-03-2017 NA29_RS02790 ea93f1a1f488d52ad1598f39c81bedd5 251 Gene3D G3DSA:3.40.50.1360 77 213 5.1E-12 T 09-03-2017 NA29_RS02790 ea93f1a1f488d52ad1598f39c81bedd5 251 Gene3D G3DSA:1.10.10.10 6 52 2.2E-9 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS02790 ea93f1a1f488d52ad1598f39c81bedd5 251 Pfam PF00455 DeoR C terminal sensor domain 73 230 2.3E-44 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain NA29_RS02790 ea93f1a1f488d52ad1598f39c81bedd5 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.9E-15 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NA29_RS02790 ea93f1a1f488d52ad1598f39c81bedd5 251 SMART SM00420 6 58 3.0E-15 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NA29_RS02790 ea93f1a1f488d52ad1598f39c81bedd5 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.8E-9 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NA29_RS02790 ea93f1a1f488d52ad1598f39c81bedd5 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.8E-9 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NA29_RS13890 3a738dd2ec75fb7c8e5b2f09ff9b74de 383 Gene3D G3DSA:1.10.540.10 3 108 1.2E-13 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS13890 3a738dd2ec75fb7c8e5b2f09ff9b74de 383 Gene3D G3DSA:2.40.110.10 150 231 1.3E-10 T 09-03-2017 NA29_RS13890 3a738dd2ec75fb7c8e5b2f09ff9b74de 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 21 114 2.7E-6 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS13890 3a738dd2ec75fb7c8e5b2f09ff9b74de 383 SUPERFAMILY SSF56645 14 232 2.49E-28 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NA29_RS14715 76180065912e18ef2b2bd064ea70905d 254 Gene3D G3DSA:1.10.10.60 203 250 2.2E-19 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS14715 76180065912e18ef2b2bd064ea70905d 254 SUPERFAMILY SSF46689 201 250 2.15E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS14715 76180065912e18ef2b2bd064ea70905d 254 SMART SM00342 165 248 3.3E-30 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS14715 76180065912e18ef2b2bd064ea70905d 254 Pfam PF12833 Helix-turn-helix domain 171 249 5.9E-26 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS14715 76180065912e18ef2b2bd064ea70905d 254 SUPERFAMILY SSF46689 153 199 7.17E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS14715 76180065912e18ef2b2bd064ea70905d 254 SUPERFAMILY SSF51182 19 83 6.08E-6 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS14715 76180065912e18ef2b2bd064ea70905d 254 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 200 244 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS14715 76180065912e18ef2b2bd064ea70905d 254 Gene3D G3DSA:2.60.120.10 18 74 1.7E-5 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS14715 76180065912e18ef2b2bd064ea70905d 254 Gene3D G3DSA:1.10.10.60 152 202 5.7E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 Gene3D G3DSA:2.30.42.10 425 512 6.1E-19 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 Gene3D G3DSA:2.30.42.10 320 414 1.0E-27 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 Gene3D G3DSA:2.40.10.10 68 207 3.4E-36 T 09-03-2017 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 Gene3D G3DSA:2.40.10.10 208 319 3.6E-43 T 09-03-2017 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 SMART SM00228 427 503 5.5E-11 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 SMART SM00228 317 399 8.1E-15 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 SUPERFAMILY SSF50156 275 399 2.23E-26 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 SUPERFAMILY SSF50494 66 309 6.12E-66 T 09-03-2017 IPR009003 Peptidase S1, PA clan NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 PRINTS PR00834 HtrA/DegQ protease family signature 249 266 2.2E-50 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 PRINTS PR00834 HtrA/DegQ protease family signature 154 166 2.2E-50 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 PRINTS PR00834 HtrA/DegQ protease family signature 271 288 2.2E-50 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 PRINTS PR00834 HtrA/DegQ protease family signature 357 369 2.2E-50 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 PRINTS PR00834 HtrA/DegQ protease family signature 175 195 2.2E-50 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 PRINTS PR00834 HtrA/DegQ protease family signature 215 239 2.2E-50 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 SUPERFAMILY SSF50156 426 511 9.46E-17 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 Pfam PF13365 Trypsin-like peptidase domain 145 278 3.0E-36 T 09-03-2017 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 Pfam PF13180 PDZ domain 428 510 1.3E-10 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 Pfam PF13180 PDZ domain 318 407 3.7E-19 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS05635 15586c1ac9f47bd6f5cc7fd856616b41 513 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 68 508 8.3E-151 T 09-03-2017 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 NA29_RS03385 5d1832a03512c47fcc7d0ef332fe7f45 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 120 133 2.8E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS03385 5d1832a03512c47fcc7d0ef332fe7f45 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 14 25 2.8E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS03385 5d1832a03512c47fcc7d0ef332fe7f45 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 195 208 2.8E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS03385 5d1832a03512c47fcc7d0ef332fe7f45 239 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 16 210 4.5E-39 T 09-03-2017 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 NA29_RS03385 5d1832a03512c47fcc7d0ef332fe7f45 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 70 206 6.6E-14 T 09-03-2017 IPR023214 HAD-like domain NA29_RS03385 5d1832a03512c47fcc7d0ef332fe7f45 239 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 17 196 4.3E-12 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS03385 5d1832a03512c47fcc7d0ef332fe7f45 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 121 186 8.5E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS03385 5d1832a03512c47fcc7d0ef332fe7f45 239 SUPERFAMILY SSF56784 14 235 3.28E-40 T 09-03-2017 IPR023214 HAD-like domain NA29_RS03385 5d1832a03512c47fcc7d0ef332fe7f45 239 Gene3D G3DSA:3.40.50.1000 14 230 1.2E-34 T 09-03-2017 IPR023214 HAD-like domain NA29_RS12200 af899baece7b02fbcb94e65dc5f9fe3c 286 SUPERFAMILY SSF53697 109 266 2.97E-15 T 09-03-2017 NA29_RS12200 af899baece7b02fbcb94e65dc5f9fe3c 286 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 75 1.7E-14 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 NA29_RS12200 af899baece7b02fbcb94e65dc5f9fe3c 286 Gene3D G3DSA:1.10.10.10 4 78 2.0E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12200 af899baece7b02fbcb94e65dc5f9fe3c 286 SUPERFAMILY SSF46689 4 77 9.32E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS12200 af899baece7b02fbcb94e65dc5f9fe3c 286 Pfam PF01380 SIS domain 134 255 2.9E-11 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 NA29_RS12200 af899baece7b02fbcb94e65dc5f9fe3c 286 Gene3D G3DSA:3.40.50.10490 112 269 2.7E-14 T 09-03-2017 NA29_RS02955 34bfc580f629e133bafa494d23abd061 346 SUPERFAMILY SSF53850 30 337 1.04E-68 T 09-03-2017 NA29_RS02955 34bfc580f629e133bafa494d23abd061 346 PIRSF PIRSF002825 4 340 7.0E-83 T 09-03-2017 IPR026045 Ferric binding protein NA29_RS02955 34bfc580f629e133bafa494d23abd061 346 Gene3D G3DSA:3.40.190.10 137 271 1.9E-43 T 09-03-2017 NA29_RS02955 34bfc580f629e133bafa494d23abd061 346 Gene3D G3DSA:3.40.190.10 272 329 3.8E-47 T 09-03-2017 NA29_RS02955 34bfc580f629e133bafa494d23abd061 346 Gene3D G3DSA:3.40.190.10 10 131 3.8E-47 T 09-03-2017 NA29_RS02955 34bfc580f629e133bafa494d23abd061 346 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 20 344 6.7E-150 T 09-03-2017 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative NA29_RS02955 34bfc580f629e133bafa494d23abd061 346 Pfam PF13343 Bacterial extracellular solute-binding protein 81 321 8.6E-34 T 09-03-2017 NA29_RS21915 099edf8645730e1576850bf413da0b15 170 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 9 153 22.26 T 09-03-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 NA29_RS21915 099edf8645730e1576850bf413da0b15 170 Pfam PF02130 Uncharacterized protein family UPF0054 32 148 2.7E-35 T 09-03-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 NA29_RS21915 099edf8645730e1576850bf413da0b15 170 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 119 129 - T 09-03-2017 IPR020549 Endoribonuclease YbeY, conserved site NA29_RS21915 099edf8645730e1576850bf413da0b15 170 SUPERFAMILY SSF55486 28 155 1.47E-43 T 09-03-2017 NA29_RS21915 099edf8645730e1576850bf413da0b15 170 Gene3D G3DSA:3.40.390.30 30 159 4.2E-46 T 09-03-2017 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 NA29_RS21915 099edf8645730e1576850bf413da0b15 170 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 47 149 3.6E-35 T 09-03-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 NA29_RS06585 5799a76b6dabb8ebd6459fa77411f52a 318 SUPERFAMILY SSF46785 6 124 1.48E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06585 5799a76b6dabb8ebd6459fa77411f52a 318 Gene3D G3DSA:3.40.190.10 204 278 1.7E-6 T 09-03-2017 NA29_RS06585 5799a76b6dabb8ebd6459fa77411f52a 318 Gene3D G3DSA:1.10.10.10 13 96 4.7E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06585 5799a76b6dabb8ebd6459fa77411f52a 318 SUPERFAMILY SSF53850 103 315 1.45E-27 T 09-03-2017 NA29_RS06585 5799a76b6dabb8ebd6459fa77411f52a 318 Gene3D G3DSA:3.40.190.10 103 203 1.1E-17 T 09-03-2017 NA29_RS06585 5799a76b6dabb8ebd6459fa77411f52a 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 76 1.6E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06585 5799a76b6dabb8ebd6459fa77411f52a 318 Pfam PF03466 LysR substrate binding domain 101 314 1.5E-25 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS20900 fb63b22874f36aa88029fefdf79f6a3a 304 Gene3D G3DSA:2.10.109.10 96 174 4.4E-58 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain NA29_RS20900 fb63b22874f36aa88029fefdf79f6a3a 304 Gene3D G3DSA:2.10.109.10 254 299 4.4E-58 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain NA29_RS20900 fb63b22874f36aa88029fefdf79f6a3a 304 Pfam PF00717 Peptidase S24-like 106 188 1.4E-22 T 09-03-2017 IPR019759 Peptidase S24/S26A/S26B NA29_RS20900 fb63b22874f36aa88029fefdf79f6a3a 304 SUPERFAMILY SSF51306 98 300 5.23E-72 T 09-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C NA29_RS20900 fb63b22874f36aa88029fefdf79f6a3a 304 ProSitePatterns PS00761 Signal peptidases I signature 3. 259 272 - T 09-03-2017 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 NA29_RS20900 fb63b22874f36aa88029fefdf79f6a3a 304 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 86 294 2.0E-53 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NA29_RS20900 fb63b22874f36aa88029fefdf79f6a3a 304 ProSitePatterns PS00501 Signal peptidases I serine active site. 109 116 - T 09-03-2017 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 NA29_RS20900 fb63b22874f36aa88029fefdf79f6a3a 304 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 164 176 1.0E-24 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NA29_RS20900 fb63b22874f36aa88029fefdf79f6a3a 304 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 254 273 1.0E-24 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NA29_RS20900 fb63b22874f36aa88029fefdf79f6a3a 304 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 100 116 1.0E-24 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 NA29_RS20900 fb63b22874f36aa88029fefdf79f6a3a 304 ProSitePatterns PS00760 Signal peptidases I lysine active site. 166 178 - T 09-03-2017 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 NA29_RS20900 fb63b22874f36aa88029fefdf79f6a3a 304 Pfam PF10502 Signal peptidase, peptidase S26 253 291 1.8E-6 T 09-03-2017 IPR019533 Peptidase S26 NA29_RS21290 20bdc58e76d67112bd11d3436479ec53 573 SUPERFAMILY SSF55073 148 300 1.18E-27 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS21290 20bdc58e76d67112bd11d3436479ec53 573 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 141 294 1.6E-20 T 09-03-2017 IPR000160 GGDEF domain NA29_RS21290 20bdc58e76d67112bd11d3436479ec53 573 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 294 6.1E-26 T 09-03-2017 IPR000160 GGDEF domain NA29_RS21290 20bdc58e76d67112bd11d3436479ec53 573 Gene3D G3DSA:3.30.70.270 143 308 1.7E-33 T 09-03-2017 NA29_RS21290 20bdc58e76d67112bd11d3436479ec53 573 Gene3D G3DSA:3.20.20.450 313 564 7.6E-95 T 09-03-2017 IPR001633 EAL domain NA29_RS21290 20bdc58e76d67112bd11d3436479ec53 573 SMART SM00267 131 301 4.2E-28 T 09-03-2017 IPR000160 GGDEF domain NA29_RS21290 20bdc58e76d67112bd11d3436479ec53 573 Pfam PF13426 PAS domain 25 130 5.0E-8 T 09-03-2017 IPR000014 PAS domain NA29_RS21290 20bdc58e76d67112bd11d3436479ec53 573 SUPERFAMILY SSF141868 326 564 9.29E-84 T 09-03-2017 IPR001633 EAL domain NA29_RS21290 20bdc58e76d67112bd11d3436479ec53 573 SMART SM00091 15 82 2.6E-8 T 09-03-2017 IPR000014 PAS domain NA29_RS21290 20bdc58e76d67112bd11d3436479ec53 573 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 137 6.5E-11 T 09-03-2017 IPR000014 PAS domain NA29_RS21290 20bdc58e76d67112bd11d3436479ec53 573 Pfam PF00563 EAL domain 323 554 2.1E-69 T 09-03-2017 IPR001633 EAL domain NA29_RS21290 20bdc58e76d67112bd11d3436479ec53 573 SMART SM00052 310 559 1.9E-116 T 09-03-2017 IPR001633 EAL domain NA29_RS21290 20bdc58e76d67112bd11d3436479ec53 573 SUPERFAMILY SSF55785 15 128 1.3E-15 T 09-03-2017 IPR000014 PAS domain NA29_RS21290 20bdc58e76d67112bd11d3436479ec53 573 Gene3D G3DSA:3.30.450.20 15 127 5.0E-16 T 09-03-2017 NA29_RS14615 e96fc8b3ddc3dee123dce0499e7a4c58 113 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 22 111 1.3E-37 T 09-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 NA29_RS14615 e96fc8b3ddc3dee123dce0499e7a4c58 113 Gene3D G3DSA:3.10.50.40 2 113 2.4E-53 T 09-03-2017 NA29_RS14615 e96fc8b3ddc3dee123dce0499e7a4c58 113 SUPERFAMILY SSF54534 2 113 5.5E-49 T 09-03-2017 NA29_RS11985 06159b15f4a93e46f7a4efe42cf4bc21 214 Gene3D G3DSA:1.10.10.10 121 210 2.1E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11985 06159b15f4a93e46f7a4efe42cf4bc21 214 Pfam PF00072 Response regulator receiver domain 4 116 1.5E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS11985 06159b15f4a93e46f7a4efe42cf4bc21 214 SMART SM00448 2 115 2.1E-32 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS11985 06159b15f4a93e46f7a4efe42cf4bc21 214 Gene3D G3DSA:3.40.50.2300 1 120 1.9E-37 T 09-03-2017 NA29_RS11985 06159b15f4a93e46f7a4efe42cf4bc21 214 SUPERFAMILY SSF46894 134 210 8.5E-20 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS11985 06159b15f4a93e46f7a4efe42cf4bc21 214 SMART SM00421 147 204 3.1E-20 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS11985 06159b15f4a93e46f7a4efe42cf4bc21 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 1.5E-16 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS11985 06159b15f4a93e46f7a4efe42cf4bc21 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.6E-9 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS11985 06159b15f4a93e46f7a4efe42cf4bc21 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.6E-9 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS11985 06159b15f4a93e46f7a4efe42cf4bc21 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.6E-9 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS11985 06159b15f4a93e46f7a4efe42cf4bc21 214 SUPERFAMILY SSF52172 1 132 3.7E-36 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS24555 27b83880f8049533537618df3e687afa 213 SUPERFAMILY SSF50685 93 187 2.83E-12 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain NA29_RS24555 27b83880f8049533537618df3e687afa 213 Gene3D G3DSA:2.40.40.10 134 186 1.4E-4 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain NA29_RS24555 27b83880f8049533537618df3e687afa 213 Pfam PF03330 Lytic transglycolase 97 185 1.9E-24 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain NA29_RS24555 27b83880f8049533537618df3e687afa 213 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 98 194 2.0E-40 T 09-03-2017 IPR012997 Rare lipoprotein A NA29_RS22680 d0fb34729aa987dd35834bbded28ed18 270 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 267 35.022 T 09-03-2017 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 NA29_RS22680 d0fb34729aa987dd35834bbded28ed18 270 SUPERFAMILY SSF51366 13 266 1.18E-83 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NA29_RS22680 d0fb34729aa987dd35834bbded28ed18 270 Gene3D G3DSA:3.20.20.70 1 266 1.9E-106 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS22680 d0fb34729aa987dd35834bbded28ed18 270 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 61 79 - T 09-03-2017 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 NA29_RS22680 d0fb34729aa987dd35834bbded28ed18 270 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 264 7.9E-93 T 09-03-2017 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 NA29_RS01160 0942ae5fa0963ad1fe459c946885c581 542 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 426 445 - T 09-03-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 NA29_RS01160 0942ae5fa0963ad1fe459c946885c581 542 SUPERFAMILY SSF52467 197 353 3.68E-58 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS01160 0942ae5fa0963ad1fe459c946885c581 542 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 397 538 1.2E-28 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NA29_RS01160 0942ae5fa0963ad1fe459c946885c581 542 SUPERFAMILY SSF52518 20 192 4.34E-40 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS01160 0942ae5fa0963ad1fe459c946885c581 542 Gene3D G3DSA:3.40.50.970 362 541 3.4E-44 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS01160 0942ae5fa0963ad1fe459c946885c581 542 SUPERFAMILY SSF52518 366 541 6.79E-42 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS01160 0942ae5fa0963ad1fe459c946885c581 542 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 20 185 7.8E-41 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 NA29_RS01160 0942ae5fa0963ad1fe459c946885c581 542 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 204 338 7.9E-17 T 09-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 NA29_RS01160 0942ae5fa0963ad1fe459c946885c581 542 Gene3D G3DSA:3.40.50.1220 194 351 5.0E-41 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS01160 0942ae5fa0963ad1fe459c946885c581 542 Gene3D G3DSA:3.40.50.970 20 190 3.9E-44 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS25075 c12a107f7a3c559c562c69a6d648281f 295 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 281 294 - T 09-03-2017 IPR023632 ATPase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210 NA29_RS25075 c12a107f7a3c559c562c69a6d648281f 295 SUPERFAMILY SSF52943 2 295 5.36E-91 T 09-03-2017 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 NA29_RS25075 c12a107f7a3c559c562c69a6d648281f 295 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 3.3E-35 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS25075 c12a107f7a3c559c562c69a6d648281f 295 PRINTS PR00126 ATP synthase gamma subunit signature 273 294 3.3E-35 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS25075 c12a107f7a3c559c562c69a6d648281f 295 PRINTS PR00126 ATP synthase gamma subunit signature 242 261 3.3E-35 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS25075 c12a107f7a3c559c562c69a6d648281f 295 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 3.3E-35 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS25075 c12a107f7a3c559c562c69a6d648281f 295 Gene3D G3DSA:3.40.1380.10 64 192 1.6E-38 T 09-03-2017 NA29_RS25075 c12a107f7a3c559c562c69a6d648281f 295 Gene3D G3DSA:1.10.287.80 210 243 1.6E-40 T 09-03-2017 NA29_RS25075 c12a107f7a3c559c562c69a6d648281f 295 Gene3D G3DSA:1.10.287.80 19 60 1.6E-40 T 09-03-2017 NA29_RS25075 c12a107f7a3c559c562c69a6d648281f 295 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 295 35.099 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS25075 c12a107f7a3c559c562c69a6d648281f 295 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 295 5.3E-103 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS25075 c12a107f7a3c559c562c69a6d648281f 295 Gene3D G3DSA:1.10.287.80 244 290 8.6E-28 T 09-03-2017 NA29_RS25075 c12a107f7a3c559c562c69a6d648281f 295 Pfam PF00231 ATP synthase 4 294 1.6E-87 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS17820 308fa5341865c68835531e5d5d725ba8 228 Hamap MF_00238 Cytidylate kinase [cmk]. 9 223 32.243 T 09-03-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 NA29_RS17820 308fa5341865c68835531e5d5d725ba8 228 TIGRFAM TIGR00017 cmk: cytidylate kinase 9 217 2.1E-70 T 09-03-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 NA29_RS17820 308fa5341865c68835531e5d5d725ba8 228 Pfam PF02224 Cytidylate kinase 11 219 7.4E-70 T 09-03-2017 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 NA29_RS17820 308fa5341865c68835531e5d5d725ba8 228 SUPERFAMILY SSF52540 9 221 4.53E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17820 308fa5341865c68835531e5d5d725ba8 228 Gene3D G3DSA:3.40.50.300 9 219 8.0E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10740 70ba1f6a4017ce49c555a844a3195abd 628 Pfam PF13515 Fusaric acid resistance protein-like 351 472 7.2E-15 T 09-03-2017 NA29_RS10740 70ba1f6a4017ce49c555a844a3195abd 628 Pfam PF12805 FUSC-like inner membrane protein yccS 70 185 1.3E-5 T 09-03-2017 IPR032692 Integral membrane protein YccS, N-terminal NA29_RS10740 70ba1f6a4017ce49c555a844a3195abd 628 SUPERFAMILY SSF103473 53 174 6.67E-8 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS10740 70ba1f6a4017ce49c555a844a3195abd 628 SUPERFAMILY SSF103473 323 451 6.67E-8 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS03235 daa8241ba4b45b33dd8ca69c942614ea 306 Pfam PF03466 LysR substrate binding domain 95 298 7.3E-21 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS03235 daa8241ba4b45b33dd8ca69c942614ea 306 Gene3D G3DSA:1.10.10.10 1 85 3.3E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03235 daa8241ba4b45b33dd8ca69c942614ea 306 SUPERFAMILY SSF46785 2 86 1.86E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03235 daa8241ba4b45b33dd8ca69c942614ea 306 Gene3D G3DSA:3.40.190.10 277 303 2.2E-29 T 09-03-2017 NA29_RS03235 daa8241ba4b45b33dd8ca69c942614ea 306 Gene3D G3DSA:3.40.190.10 90 172 2.2E-29 T 09-03-2017 NA29_RS03235 daa8241ba4b45b33dd8ca69c942614ea 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.9E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03235 daa8241ba4b45b33dd8ca69c942614ea 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.9E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03235 daa8241ba4b45b33dd8ca69c942614ea 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.9E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03235 daa8241ba4b45b33dd8ca69c942614ea 306 Gene3D G3DSA:3.40.190.10 173 271 2.3E-23 T 09-03-2017 NA29_RS03235 daa8241ba4b45b33dd8ca69c942614ea 306 SUPERFAMILY SSF53850 90 300 3.98E-39 T 09-03-2017 NA29_RS03235 daa8241ba4b45b33dd8ca69c942614ea 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.1E-14 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01250 9235fdaa448e2f879bf907a70d630a0e 156 Gene3D G3DSA:3.10.450.50 12 154 7.5E-28 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS01250 9235fdaa448e2f879bf907a70d630a0e 156 Pfam PF13577 SnoaL-like domain 17 146 2.0E-21 T 09-03-2017 IPR009959 Polyketide cyclase SnoaL-like domain NA29_RS01250 9235fdaa448e2f879bf907a70d630a0e 156 SUPERFAMILY SSF54427 13 154 2.54E-28 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS08695 acb22021a8deb16ebd87f8b8e67fe691 861 SUPERFAMILY SSF74778 1 160 1.01E-66 T 09-03-2017 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 NA29_RS08695 acb22021a8deb16ebd87f8b8e67fe691 861 Gene3D G3DSA:3.40.1060.10 521 683 5.5E-86 T 09-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08695 acb22021a8deb16ebd87f8b8e67fe691 861 Pfam PF00330 Aconitase family (aconitate hydratase) 464 815 3.2E-41 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08695 acb22021a8deb16ebd87f8b8e67fe691 861 Gene3D G3DSA:3.20.19.10 163 359 2.7E-88 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS08695 acb22021a8deb16ebd87f8b8e67fe691 861 ProSitePatterns PS00450 Aconitase family signature 1. 703 720 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 NA29_RS08695 acb22021a8deb16ebd87f8b8e67fe691 861 Gene3D G3DSA:3.30.499.10 403 520 2.0E-63 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08695 acb22021a8deb16ebd87f8b8e67fe691 861 Gene3D G3DSA:3.30.499.10 684 859 9.9E-53 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08695 acb22021a8deb16ebd87f8b8e67fe691 861 PIRSF PIRSF036687 1 859 0.0 T 09-03-2017 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 NA29_RS08695 acb22021a8deb16ebd87f8b8e67fe691 861 SUPERFAMILY SSF53732 377 854 2.88E-145 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS08695 acb22021a8deb16ebd87f8b8e67fe691 861 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 380 1.2E-93 T 09-03-2017 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 NA29_RS08695 acb22021a8deb16ebd87f8b8e67fe691 861 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 NA29_RS08695 acb22021a8deb16ebd87f8b8e67fe691 861 Pfam PF11791 Aconitate B N-terminal domain 4 156 2.8E-64 T 09-03-2017 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 NA29_RS08695 acb22021a8deb16ebd87f8b8e67fe691 861 SUPERFAMILY SSF52016 162 368 1.45E-65 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS08695 acb22021a8deb16ebd87f8b8e67fe691 861 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 09-03-2017 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 NA29_RS19430 165b6eb9a128d9865fcef3d52677e1a0 425 SUPERFAMILY SSF52440 1 101 4.89E-34 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS19430 165b6eb9a128d9865fcef3d52677e1a0 425 SUPERFAMILY SSF51246 327 420 2.9E-29 T 09-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 NA29_RS19430 165b6eb9a128d9865fcef3d52677e1a0 425 Gene3D G3DSA:3.30.1490.20 119 188 1.9E-33 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NA29_RS19430 165b6eb9a128d9865fcef3d52677e1a0 425 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 1.3E-34 T 09-03-2017 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 NA29_RS19430 165b6eb9a128d9865fcef3d52677e1a0 425 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 294 3.5E-78 T 09-03-2017 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 NA29_RS19430 165b6eb9a128d9865fcef3d52677e1a0 425 SMART SM01210 328 420 4.3E-45 T 09-03-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 NA29_RS19430 165b6eb9a128d9865fcef3d52677e1a0 425 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 1.8E-167 T 09-03-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 NA29_RS19430 165b6eb9a128d9865fcef3d52677e1a0 425 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 41.746 T 09-03-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 NA29_RS19430 165b6eb9a128d9865fcef3d52677e1a0 425 Gene3D G3DSA:3.40.50.20 2 93 1.7E-34 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS19430 165b6eb9a128d9865fcef3d52677e1a0 425 SUPERFAMILY SSF56059 102 324 2.47E-62 T 09-03-2017 NA29_RS19430 165b6eb9a128d9865fcef3d52677e1a0 425 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 418 2.4E-27 T 09-03-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 NA29_RS19430 165b6eb9a128d9865fcef3d52677e1a0 425 SMART SM01209 101 294 1.2E-137 T 09-03-2017 NA29_RS19430 165b6eb9a128d9865fcef3d52677e1a0 425 Gene3D G3DSA:3.30.470.20 189 326 9.3E-60 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS19430 165b6eb9a128d9865fcef3d52677e1a0 425 Gene3D G3DSA:3.90.600.10 329 419 2.8E-31 T 09-03-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 NA29_RS17740 b3840cb4a1a3389b9103fb835a928162 310 SUPERFAMILY SSF52467 188 310 4.52E-47 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS17740 b3840cb4a1a3389b9103fb835a928162 310 SMART SM00893 3 182 4.8E-58 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 NA29_RS17740 b3840cb4a1a3389b9103fb835a928162 310 Pfam PF01012 Electron transfer flavoprotein domain 4 170 1.9E-39 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 NA29_RS17740 b3840cb4a1a3389b9103fb835a928162 310 PIRSF PIRSF000089 1 310 5.5E-107 T 09-03-2017 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 NA29_RS17740 b3840cb4a1a3389b9103fb835a928162 310 SUPERFAMILY SSF52402 2 185 1.05E-58 T 09-03-2017 NA29_RS17740 b3840cb4a1a3389b9103fb835a928162 310 Gene3D G3DSA:3.40.50.1220 185 309 9.8E-61 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS17740 b3840cb4a1a3389b9103fb835a928162 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 09-03-2017 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 NA29_RS17740 b3840cb4a1a3389b9103fb835a928162 310 Gene3D G3DSA:3.40.50.620 1 182 3.6E-65 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS17740 b3840cb4a1a3389b9103fb835a928162 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 2.0E-35 T 09-03-2017 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 NA29_RS19005 06a4bab9b330488cda2da471e141d0ef 276 PIRSF PIRSF002854 1 276 1.1E-90 T 09-03-2017 IPR004872 Lipoprotein NlpA family NA29_RS19005 06a4bab9b330488cda2da471e141d0ef 276 SUPERFAMILY SSF53850 37 276 8.69E-77 T 09-03-2017 NA29_RS19005 06a4bab9b330488cda2da471e141d0ef 276 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 29 275 6.5E-70 T 09-03-2017 IPR004872 Lipoprotein NlpA family NA29_RS19005 06a4bab9b330488cda2da471e141d0ef 276 Gene3D G3DSA:3.40.190.10 34 164 7.4E-50 T 09-03-2017 NA29_RS19005 06a4bab9b330488cda2da471e141d0ef 276 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 72 - T 09-03-2017 IPR010916 TonB box, conserved site NA29_RS19005 06a4bab9b330488cda2da471e141d0ef 276 Pfam PF03180 NLPA lipoprotein 37 276 3.1E-81 T 09-03-2017 IPR004872 Lipoprotein NlpA family NA29_RS10275 2ffce33bf40ccdba568bc55339619322 237 SUPERFAMILY SSF51735 1 235 5.55E-47 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10275 2ffce33bf40ccdba568bc55339619322 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 233 3.2E-31 T 09-03-2017 NA29_RS10275 2ffce33bf40ccdba568bc55339619322 237 Gene3D G3DSA:3.40.50.720 1 233 1.6E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10275 2ffce33bf40ccdba568bc55339619322 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 1.0E-18 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10275 2ffce33bf40ccdba568bc55339619322 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 1.0E-18 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10275 2ffce33bf40ccdba568bc55339619322 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.0E-18 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10275 2ffce33bf40ccdba568bc55339619322 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 220 1.0E-18 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS04505 e9448250cab75aebc99882cd6d88abab 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS04505 e9448250cab75aebc99882cd6d88abab 241 SMART SM00382 26 208 2.1E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS04505 e9448250cab75aebc99882cd6d88abab 241 Gene3D G3DSA:3.40.50.300 1 236 5.7E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS04505 e9448250cab75aebc99882cd6d88abab 241 PIRSF PIRSF039085 1 241 1.5E-104 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 NA29_RS04505 e9448250cab75aebc99882cd6d88abab 241 SUPERFAMILY SSF52540 1 235 1.45E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS04505 e9448250cab75aebc99882cd6d88abab 241 Pfam PF00005 ABC transporter 17 165 4.0E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS16270 7b23f1a2ecea2b33aa9a8902ca1f102a 215 Pfam PF01810 LysE type translocator 16 207 5.3E-28 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS16270 7b23f1a2ecea2b33aa9a8902ca1f102a 215 PIRSF PIRSF006324 1 211 2.1E-52 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS14940 17ecdb9d576e524ac8fea2e7369bdc5d 251 SMART SM00855 23 180 7.1E-13 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 NA29_RS14940 17ecdb9d576e524ac8fea2e7369bdc5d 251 SUPERFAMILY SSF53254 22 221 1.26E-38 T 09-03-2017 IPR029033 Histidine phosphatase superfamily NA29_RS14940 17ecdb9d576e524ac8fea2e7369bdc5d 251 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 24 221 4.4E-37 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 NA29_RS14940 17ecdb9d576e524ac8fea2e7369bdc5d 251 Gene3D G3DSA:3.40.50.1240 22 186 1.6E-33 T 09-03-2017 IPR029033 Histidine phosphatase superfamily NA29_RS20305 c50e79152c2912c61446794826eba0f1 272 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 17 272 3.4E-98 T 09-03-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 NA29_RS20305 c50e79152c2912c61446794826eba0f1 272 SUPERFAMILY SSF51621 12 272 1.33E-101 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS20305 c50e79152c2912c61446794826eba0f1 272 Gene3D G3DSA:3.20.20.60 10 272 2.9E-109 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS20305 c50e79152c2912c61446794826eba0f1 272 PIRSF PIRSF000388 3 272 1.2E-98 T 09-03-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 NA29_RS20305 c50e79152c2912c61446794826eba0f1 272 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 12 272 41.777 T 09-03-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 NA29_RS20305 c50e79152c2912c61446794826eba0f1 272 Pfam PF02548 Ketopantoate hydroxymethyltransferase 12 267 3.8E-107 T 09-03-2017 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 NA29_RS03985 73bf3a4e419a72c197b85c1a3eaf41b7 209 Gene3D G3DSA:3.40.30.10 2 95 2.0E-21 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS03985 73bf3a4e419a72c197b85c1a3eaf41b7 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 77 1.7E-12 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS03985 73bf3a4e419a72c197b85c1a3eaf41b7 209 Gene3D G3DSA:1.20.1050.10 96 201 1.3E-29 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS03985 73bf3a4e419a72c197b85c1a3eaf41b7 209 SUPERFAMILY SSF47616 81 202 2.51E-25 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS03985 73bf3a4e419a72c197b85c1a3eaf41b7 209 SUPERFAMILY SSF52833 1 86 5.04E-18 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS12790 19f00fba5090645de0706d7f4eb2aded 256 Gene3D G3DSA:3.40.50.80 99 255 1.7E-47 T 09-03-2017 NA29_RS12790 19f00fba5090645de0706d7f4eb2aded 256 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 3.8E-7 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS12790 19f00fba5090645de0706d7f4eb2aded 256 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 3.8E-7 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS12790 19f00fba5090645de0706d7f4eb2aded 256 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 3.8E-7 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS12790 19f00fba5090645de0706d7f4eb2aded 256 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 3.8E-7 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS12790 19f00fba5090645de0706d7f4eb2aded 256 Gene3D G3DSA:2.40.30.10 5 98 8.8E-31 T 09-03-2017 NA29_RS12790 19f00fba5090645de0706d7f4eb2aded 256 SUPERFAMILY SSF52343 104 254 3.93E-43 T 09-03-2017 NA29_RS12790 19f00fba5090645de0706d7f4eb2aded 256 Pfam PF00175 Oxidoreductase NAD-binding domain 112 229 8.0E-10 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NA29_RS12790 19f00fba5090645de0706d7f4eb2aded 256 Pfam PF00970 Oxidoreductase FAD-binding domain 18 91 2.1E-8 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 NA29_RS12790 19f00fba5090645de0706d7f4eb2aded 256 PRINTS PR00410 Phenol hydroxylase reductase family signature 51 58 1.4E-5 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS12790 19f00fba5090645de0706d7f4eb2aded 256 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 1.4E-5 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS12790 19f00fba5090645de0706d7f4eb2aded 256 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 1.4E-5 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS12790 19f00fba5090645de0706d7f4eb2aded 256 SUPERFAMILY SSF63380 7 99 1.0E-24 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS16235 99f4daf27b2bd36f663774bd4bb1cb3e 313 Gene3D G3DSA:3.40.50.1980 49 135 2.3E-26 T 09-03-2017 NA29_RS16235 99f4daf27b2bd36f663774bd4bb1cb3e 313 Pfam PF01497 Periplasmic binding protein 52 282 6.0E-14 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 NA29_RS16235 99f4daf27b2bd36f663774bd4bb1cb3e 313 SUPERFAMILY SSF53807 51 304 9.03E-41 T 09-03-2017 NA29_RS16235 99f4daf27b2bd36f663774bd4bb1cb3e 313 Gene3D G3DSA:3.40.50.1980 143 310 2.0E-31 T 09-03-2017 NA29_RS00255 36127a383dbf0fddde322cc93d1646c4 522 Pfam PF00877 NlpC/P60 family 359 441 1.4E-7 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain NA29_RS00255 36127a383dbf0fddde322cc93d1646c4 522 SUPERFAMILY SSF54001 339 445 2.8E-14 T 09-03-2017 NA29_RS00255 36127a383dbf0fddde322cc93d1646c4 522 Gene3D G3DSA:3.90.1720.10 347 441 1.7E-13 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain NA29_RS00255 36127a383dbf0fddde322cc93d1646c4 522 Pfam PF12912 NLPC_P60 stabilising domain, N term 11 163 5.6E-25 T 09-03-2017 IPR025606 NLPC/P60, N-terminal domain NA29_RS00255 36127a383dbf0fddde322cc93d1646c4 522 Pfam PF12914 SH3 domain of SH3b2 type 256 307 6.8E-7 T 09-03-2017 IPR026864 SH3b2-type SH3 domain NA29_RS00255 36127a383dbf0fddde322cc93d1646c4 522 Pfam PF12913 SH3 domain (SH3b1 type) 196 248 2.2E-21 T 09-03-2017 NA29_RS00255 36127a383dbf0fddde322cc93d1646c4 522 PIRSF PIRSF019015 42 506 2.2E-131 T 09-03-2017 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type NA29_RS06630 1da6efb1eaaaad595dccd4c1df2e5f0b 184 Gene3D G3DSA:2.60.120.10 6 115 5.7E-16 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS06630 1da6efb1eaaaad595dccd4c1df2e5f0b 184 Pfam PF06052 3-hydroxyanthranilic acid dioxygenase 6 154 4.9E-43 T 09-03-2017 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 NA29_RS06630 1da6efb1eaaaad595dccd4c1df2e5f0b 184 TIGRFAM TIGR03037 anthran_nbaC: 3-hydroxyanthranilate 3,4-dioxygenase 8 167 2.1E-78 T 09-03-2017 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 NA29_RS06630 1da6efb1eaaaad595dccd4c1df2e5f0b 184 SUPERFAMILY SSF51182 4 171 6.99E-53 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS06630 1da6efb1eaaaad595dccd4c1df2e5f0b 184 Hamap MF_00825 3-hydroxyanthranilate 3,4-dioxygenase [nbaC]. 4 172 33.022 T 09-03-2017 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 NA29_RS01500 0fb49acf955fa3b931f5e337cf6c62ce 668 SUPERFAMILY SSF48435 52 500 7.19E-107 T 09-03-2017 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 NA29_RS01500 0fb49acf955fa3b931f5e337cf6c62ce 668 Pfam PF01464 Transglycosylase SLT domain 517 613 1.0E-20 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 NA29_RS01500 0fb49acf955fa3b931f5e337cf6c62ce 668 Pfam PF14718 Soluble lytic murein transglycosylase L domain 432 491 2.2E-6 T 09-03-2017 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 NA29_RS01500 0fb49acf955fa3b931f5e337cf6c62ce 668 SUPERFAMILY SSF53955 502 663 1.46E-45 T 09-03-2017 IPR023346 Lysozyme-like domain NA29_RS01500 0fb49acf955fa3b931f5e337cf6c62ce 668 Gene3D G3DSA:1.25.20.10 54 412 2.9E-92 T 09-03-2017 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 NA29_RS01500 0fb49acf955fa3b931f5e337cf6c62ce 668 Gene3D G3DSA:1.10.530.10 499 660 2.7E-45 T 09-03-2017 NA29_RS01500 0fb49acf955fa3b931f5e337cf6c62ce 668 Gene3D G3DSA:1.10.1240.20 431 487 1.8E-6 T 09-03-2017 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 NA29_RS06725 c5b93d204f34fb03d221bc519cab69e2 656 Pfam PF00694 Aconitase C-terminal domain 81 136 9.1E-14 T 09-03-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS06725 c5b93d204f34fb03d221bc519cab69e2 656 Gene3D G3DSA:3.20.19.10 29 137 2.9E-19 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS06725 c5b93d204f34fb03d221bc519cab69e2 656 Gene3D G3DSA:3.40.1060.10 383 491 1.7E-26 T 09-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS06725 c5b93d204f34fb03d221bc519cab69e2 656 Pfam PF00330 Aconitase family (aconitate hydratase) 320 642 2.9E-83 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS06725 c5b93d204f34fb03d221bc519cab69e2 656 SUPERFAMILY SSF53732 201 651 2.49E-105 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS06725 c5b93d204f34fb03d221bc519cab69e2 656 Gene3D G3DSA:3.30.499.10 204 381 4.8E-31 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS06725 c5b93d204f34fb03d221bc519cab69e2 656 SUPERFAMILY SSF52016 36 147 4.91E-24 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS06725 c5b93d204f34fb03d221bc519cab69e2 656 Gene3D G3DSA:3.30.499.10 500 652 7.2E-34 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS06725 c5b93d204f34fb03d221bc519cab69e2 656 PRINTS PR00415 Aconitase family signature 584 597 1.6E-19 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS06725 c5b93d204f34fb03d221bc519cab69e2 656 PRINTS PR00415 Aconitase family signature 413 426 1.6E-19 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS06725 c5b93d204f34fb03d221bc519cab69e2 656 PRINTS PR00415 Aconitase family signature 427 440 1.6E-19 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS06725 c5b93d204f34fb03d221bc519cab69e2 656 PRINTS PR00415 Aconitase family signature 335 348 1.6E-19 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS06725 c5b93d204f34fb03d221bc519cab69e2 656 PRINTS PR00415 Aconitase family signature 523 534 1.6E-19 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS06725 c5b93d204f34fb03d221bc519cab69e2 656 PRINTS PR00415 Aconitase family signature 349 364 1.6E-19 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS13155 e30afafc5611c8521bef9f7996c60874 324 Pfam PF16200 C-terminal region of band_7 243 300 9.0E-27 T 09-03-2017 IPR032435 Band 7, C-terminal extension NA29_RS13155 e30afafc5611c8521bef9f7996c60874 324 Pfam PF01145 SPFH domain / Band 7 family 23 193 3.1E-32 T 09-03-2017 IPR001107 Band 7 domain NA29_RS13155 e30afafc5611c8521bef9f7996c60874 324 SMART SM00244 19 177 2.9E-59 T 09-03-2017 IPR001107 Band 7 domain NA29_RS13155 e30afafc5611c8521bef9f7996c60874 324 SUPERFAMILY SSF117892 50 184 7.85E-40 T 09-03-2017 IPR001107 Band 7 domain NA29_RS13155 e30afafc5611c8521bef9f7996c60874 324 PRINTS PR00721 Stomatin signature 129 152 9.6E-32 T 09-03-2017 IPR001972 Stomatin family GO:0016020 NA29_RS13155 e30afafc5611c8521bef9f7996c60874 324 PRINTS PR00721 Stomatin signature 26 48 9.6E-32 T 09-03-2017 IPR001972 Stomatin family GO:0016020 NA29_RS13155 e30afafc5611c8521bef9f7996c60874 324 PRINTS PR00721 Stomatin signature 153 171 9.6E-32 T 09-03-2017 IPR001972 Stomatin family GO:0016020 NA29_RS13155 e30afafc5611c8521bef9f7996c60874 324 PRINTS PR00721 Stomatin signature 109 126 9.6E-32 T 09-03-2017 IPR001972 Stomatin family GO:0016020 NA29_RS13155 e30afafc5611c8521bef9f7996c60874 324 PRINTS PR00721 Stomatin signature 172 193 9.6E-32 T 09-03-2017 IPR001972 Stomatin family GO:0016020 NA29_RS13155 e30afafc5611c8521bef9f7996c60874 324 PRINTS PR00721 Stomatin signature 74 95 9.6E-32 T 09-03-2017 IPR001972 Stomatin family GO:0016020 NA29_RS17465 1d350db82833fe78dfa7ae9bcb1cd971 704 Gene3D G3DSA:3.60.110.10 14 291 2.9E-54 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NA29_RS17465 1d350db82833fe78dfa7ae9bcb1cd971 704 PIRSF PIRSF006630 11 691 1.1E-151 T 09-03-2017 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 NA29_RS17465 1d350db82833fe78dfa7ae9bcb1cd971 704 Pfam PF00795 Carbon-nitrogen hydrolase 18 282 4.3E-20 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NA29_RS17465 1d350db82833fe78dfa7ae9bcb1cd971 704 SUPERFAMILY SSF56317 13 293 6.28E-48 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NA29_RS17465 1d350db82833fe78dfa7ae9bcb1cd971 704 SUPERFAMILY SSF52402 327 524 1.15E-64 T 09-03-2017 NA29_RS17465 1d350db82833fe78dfa7ae9bcb1cd971 704 SUPERFAMILY SSF52402 555 598 1.15E-64 T 09-03-2017 NA29_RS17465 1d350db82833fe78dfa7ae9bcb1cd971 704 SUPERFAMILY SSF52402 639 670 1.15E-64 T 09-03-2017 NA29_RS17465 1d350db82833fe78dfa7ae9bcb1cd971 704 TIGRFAM TIGR00552 nadE: NAD+ synthetase 353 523 1.5E-21 T 09-03-2017 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 NA29_RS17465 1d350db82833fe78dfa7ae9bcb1cd971 704 Gene3D G3DSA:3.40.50.620 641 669 1.5E-58 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS17465 1d350db82833fe78dfa7ae9bcb1cd971 704 Gene3D G3DSA:3.40.50.620 329 601 1.5E-58 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS17465 1d350db82833fe78dfa7ae9bcb1cd971 704 Pfam PF02540 NAD synthase 349 523 8.5E-25 T 09-03-2017 IPR022310 NAD/GMP synthase NA29_RS07570 0cbf4e85e7796ced703b7fb904364184 525 Gene3D G3DSA:3.20.20.450 272 514 5.6E-78 T 09-03-2017 IPR001633 EAL domain NA29_RS07570 0cbf4e85e7796ced703b7fb904364184 525 Pfam PF00563 EAL domain 273 502 5.0E-60 T 09-03-2017 IPR001633 EAL domain NA29_RS07570 0cbf4e85e7796ced703b7fb904364184 525 SUPERFAMILY SSF141868 272 513 1.07E-71 T 09-03-2017 IPR001633 EAL domain NA29_RS07570 0cbf4e85e7796ced703b7fb904364184 525 SMART SM00052 266 508 6.9E-94 T 09-03-2017 IPR001633 EAL domain NA29_RS07570 0cbf4e85e7796ced703b7fb904364184 525 Pfam PF12792 CSS motif domain associated with EAL 40 234 2.2E-18 T 09-03-2017 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain NA29_RS13825 dea0966e16fc7bdd6881e92fb0867ae4 230 Gene3D G3DSA:3.40.50.1360 4 144 2.2E-54 T 09-03-2017 NA29_RS13825 dea0966e16fc7bdd6881e92fb0867ae4 230 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 12 223 1.2E-65 T 09-03-2017 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 NA29_RS13825 dea0966e16fc7bdd6881e92fb0867ae4 230 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 226 33.081 T 09-03-2017 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 NA29_RS13825 dea0966e16fc7bdd6881e92fb0867ae4 230 Pfam PF04198 Putative sugar-binding domain 4 45 6.7E-5 T 09-03-2017 IPR007324 Sugar-binding domain, putative GO:0030246 NA29_RS13825 dea0966e16fc7bdd6881e92fb0867ae4 230 Gene3D G3DSA:3.30.70.260 145 205 2.2E-25 T 09-03-2017 NA29_RS13825 dea0966e16fc7bdd6881e92fb0867ae4 230 SUPERFAMILY SSF100950 1 151 5.71E-42 T 09-03-2017 NA29_RS13825 dea0966e16fc7bdd6881e92fb0867ae4 230 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 222 5.4E-56 T 09-03-2017 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 NA29_RS13825 dea0966e16fc7bdd6881e92fb0867ae4 230 SUPERFAMILY SSF75445 130 207 9.29E-22 T 09-03-2017 NA29_RS09140 3e018ef9ca0e7056e3276fcc23d0fa73 424 SUPERFAMILY SSF53822 31 383 1.61E-59 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS09140 3e018ef9ca0e7056e3276fcc23d0fa73 424 Gene3D G3DSA:3.40.50.2300 314 373 5.0E-23 T 09-03-2017 NA29_RS09140 3e018ef9ca0e7056e3276fcc23d0fa73 424 Gene3D G3DSA:3.40.50.2300 27 165 5.0E-23 T 09-03-2017 NA29_RS09140 3e018ef9ca0e7056e3276fcc23d0fa73 424 Pfam PF13458 Periplasmic binding protein 31 381 7.3E-61 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS09140 3e018ef9ca0e7056e3276fcc23d0fa73 424 Gene3D G3DSA:3.40.50.2300 166 313 3.4E-24 T 09-03-2017 NA29_RS00390 7294ba1332bc311d2b9d58f91b873483 232 SUPERFAMILY SSF52317 2 213 2.75E-43 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS00390 7294ba1332bc311d2b9d58f91b873483 232 Gene3D G3DSA:3.40.50.880 1 225 8.2E-73 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS00390 7294ba1332bc311d2b9d58f91b873483 232 Pfam PF03575 Peptidase family S51 2 203 3.3E-58 T 09-03-2017 IPR005320 Peptidase S51 GO:0006508|GO:0008236 NA29_RS22320 b96ded46342dcb176d01b380f99bf12e 170 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.0E-8 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 NA29_RS22320 b96ded46342dcb176d01b380f99bf12e 170 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.0E-8 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 NA29_RS22320 b96ded46342dcb176d01b380f99bf12e 170 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.294 T 09-03-2017 IPR022927 RNA pyrophosphohydrolase RppH NA29_RS22320 b96ded46342dcb176d01b380f99bf12e 170 Gene3D G3DSA:3.90.79.10 7 152 4.3E-30 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS22320 b96ded46342dcb176d01b380f99bf12e 170 SUPERFAMILY SSF55811 6 155 4.33E-30 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS22320 b96ded46342dcb176d01b380f99bf12e 170 Pfam PF00293 NUDIX domain 7 136 4.7E-23 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 NA29_RS22320 b96ded46342dcb176d01b380f99bf12e 170 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 NA29_RS17315 63a11ecaf52c77d10191c77f5f3e683f 325 SUPERFAMILY SSF63380 7 102 2.92E-24 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS17315 63a11ecaf52c77d10191c77f5f3e683f 325 Pfam PF00175 Oxidoreductase NAD-binding domain 118 210 5.9E-5 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NA29_RS17315 63a11ecaf52c77d10191c77f5f3e683f 325 SUPERFAMILY SSF52343 100 232 1.13E-26 T 09-03-2017 NA29_RS17315 63a11ecaf52c77d10191c77f5f3e683f 325 SUPERFAMILY SSF54292 222 324 7.21E-28 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS17315 63a11ecaf52c77d10191c77f5f3e683f 325 Gene3D G3DSA:2.40.30.10 6 103 1.5E-31 T 09-03-2017 NA29_RS17315 63a11ecaf52c77d10191c77f5f3e683f 325 Gene3D G3DSA:3.40.50.80 112 225 7.9E-24 T 09-03-2017 NA29_RS17315 63a11ecaf52c77d10191c77f5f3e683f 325 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 274 282 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NA29_RS17315 63a11ecaf52c77d10191c77f5f3e683f 325 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 246 314 1.6E-13 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS17315 63a11ecaf52c77d10191c77f5f3e683f 325 Gene3D G3DSA:3.10.20.30 226 323 7.7E-28 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS17315 63a11ecaf52c77d10191c77f5f3e683f 325 PRINTS PR00409 Phthalate dioxygenase reductase family signature 78 92 1.2E-34 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS17315 63a11ecaf52c77d10191c77f5f3e683f 325 PRINTS PR00409 Phthalate dioxygenase reductase family signature 197 205 1.2E-34 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS17315 63a11ecaf52c77d10191c77f5f3e683f 325 PRINTS PR00409 Phthalate dioxygenase reductase family signature 32 42 1.2E-34 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS17315 63a11ecaf52c77d10191c77f5f3e683f 325 PRINTS PR00409 Phthalate dioxygenase reductase family signature 54 68 1.2E-34 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS17315 63a11ecaf52c77d10191c77f5f3e683f 325 PRINTS PR00409 Phthalate dioxygenase reductase family signature 92 106 1.2E-34 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS17315 63a11ecaf52c77d10191c77f5f3e683f 325 PRINTS PR00409 Phthalate dioxygenase reductase family signature 42 54 1.2E-34 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS17315 63a11ecaf52c77d10191c77f5f3e683f 325 PRINTS PR00409 Phthalate dioxygenase reductase family signature 142 151 1.2E-34 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS10210 f8bf91afd6c5cc071b64d450622af472 446 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 293 9.0E-18 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NA29_RS10210 f8bf91afd6c5cc071b64d450622af472 446 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 374 1.1E-87 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NA29_RS10210 f8bf91afd6c5cc071b64d450622af472 446 Gene3D G3DSA:2.40.50.100 70 103 3.7E-23 T 09-03-2017 NA29_RS10210 f8bf91afd6c5cc071b64d450622af472 446 Gene3D G3DSA:2.40.50.100 178 210 3.7E-23 T 09-03-2017 NA29_RS10210 f8bf91afd6c5cc071b64d450622af472 446 SUPERFAMILY SSF111369 59 298 1.7E-64 T 09-03-2017 NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 Pfam PF03929 PepSY-associated TM region 7 377 3.8E-56 T 09-03-2017 IPR005625 PepSY-associated TM protein NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 Gene3D G3DSA:3.40.50.360 419 559 7.4E-34 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 813 829 2.8E-8 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 769 778 2.8E-8 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 681 688 2.8E-8 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 836 844 2.8E-8 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 745 764 2.8E-8 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 Pfam PF00258 Flavodoxin 421 542 1.7E-20 T 09-03-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 Gene3D G3DSA:2.40.30.10 595 623 1.3E-8 T 09-03-2017 NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 Gene3D G3DSA:2.40.30.10 668 727 1.3E-8 T 09-03-2017 NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 SUPERFAMILY SSF63380 572 736 4.66E-20 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 SUPERFAMILY SSF52218 418 561 8.61E-37 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 Gene3D G3DSA:3.40.50.80 741 877 1.3E-30 T 09-03-2017 NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 PRINTS PR00369 Flavodoxin signature 468 479 3.1E-7 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 PRINTS PR00369 Flavodoxin signature 499 509 3.1E-7 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 PRINTS PR00369 Flavodoxin signature 420 433 3.1E-7 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 SUPERFAMILY SSF52343 735 877 1.57E-28 T 09-03-2017 NA29_RS10535 a38edfc176ffdbaca733af71dee055a9 877 Pfam PF00175 Oxidoreductase NAD-binding domain 746 850 4.5E-9 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NA29_RS11000 6a2aecf70280a9b6dc236ba3cc79bc07 194 Pfam PF13977 Bacterial transcriptional repressor 84 175 3.5E-7 T 09-03-2017 NA29_RS11000 6a2aecf70280a9b6dc236ba3cc79bc07 194 SUPERFAMILY SSF48498 78 192 1.18E-18 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS11000 6a2aecf70280a9b6dc236ba3cc79bc07 194 Gene3D G3DSA:1.10.10.60 2 65 1.7E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS11000 6a2aecf70280a9b6dc236ba3cc79bc07 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 4.1E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS11000 6a2aecf70280a9b6dc236ba3cc79bc07 194 Gene3D G3DSA:1.10.357.10 69 169 4.9E-17 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS11000 6a2aecf70280a9b6dc236ba3cc79bc07 194 SUPERFAMILY SSF46689 5 80 2.1E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS07680 f37536cdb724403aec9a5f9d9dffc78b 447 SUPERFAMILY SSF51338 374 438 2.51E-32 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS07680 f37536cdb724403aec9a5f9d9dffc78b 447 SUPERFAMILY SSF51338 10 62 2.51E-32 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS07680 f37536cdb724403aec9a5f9d9dffc78b 447 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 26 431 4.9E-96 T 09-03-2017 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 NA29_RS07680 f37536cdb724403aec9a5f9d9dffc78b 447 SUPERFAMILY SSF51556 63 375 5.68E-94 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS07680 f37536cdb724403aec9a5f9d9dffc78b 447 Gene3D G3DSA:3.20.20.140 76 413 3.2E-96 T 09-03-2017 NA29_RS07680 f37536cdb724403aec9a5f9d9dffc78b 447 Pfam PF01979 Amidohydrolase family 60 428 3.6E-26 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS07680 f37536cdb724403aec9a5f9d9dffc78b 447 Gene3D G3DSA:2.30.40.10 11 75 2.3E-20 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS07680 f37536cdb724403aec9a5f9d9dffc78b 447 ProSitePatterns PS00483 Dihydroorotase signature 2. 310 321 - T 09-03-2017 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 NA29_RS14315 771a1e2939a6f07027e6fa0449271ee1 551 SUPERFAMILY SSF51230 3 97 4.06E-22 T 09-03-2017 IPR011053 Single hybrid motif NA29_RS14315 771a1e2939a6f07027e6fa0449271ee1 551 Pfam PF00364 Biotin-requiring enzyme 120 191 1.3E-22 T 09-03-2017 IPR000089 Biotin/lipoyl attachment NA29_RS14315 771a1e2939a6f07027e6fa0449271ee1 551 Pfam PF00364 Biotin-requiring enzyme 6 77 9.0E-21 T 09-03-2017 IPR000089 Biotin/lipoyl attachment NA29_RS14315 771a1e2939a6f07027e6fa0449271ee1 551 SUPERFAMILY SSF47005 242 286 1.57E-12 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 NA29_RS14315 771a1e2939a6f07027e6fa0449271ee1 551 Gene3D G3DSA:3.30.559.10 312 550 5.2E-82 T 09-03-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 NA29_RS14315 771a1e2939a6f07027e6fa0449271ee1 551 Pfam PF02817 e3 binding domain 248 282 2.3E-14 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 NA29_RS14315 771a1e2939a6f07027e6fa0449271ee1 551 SUPERFAMILY SSF51230 118 210 1.57E-23 T 09-03-2017 IPR011053 Single hybrid motif NA29_RS14315 771a1e2939a6f07027e6fa0449271ee1 551 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 101 550 2.8E-196 T 09-03-2017 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 NA29_RS14315 771a1e2939a6f07027e6fa0449271ee1 551 SUPERFAMILY SSF52777 311 550 4.05E-81 T 09-03-2017 NA29_RS14315 771a1e2939a6f07027e6fa0449271ee1 551 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 142 171 - T 09-03-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 NA29_RS14315 771a1e2939a6f07027e6fa0449271ee1 551 Gene3D G3DSA:4.10.320.10 241 287 1.6E-18 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 NA29_RS14315 771a1e2939a6f07027e6fa0449271ee1 551 Gene3D G3DSA:2.40.50.100 5 81 6.2E-21 T 09-03-2017 NA29_RS14315 771a1e2939a6f07027e6fa0449271ee1 551 Gene3D G3DSA:2.40.50.100 119 193 8.2E-23 T 09-03-2017 NA29_RS14315 771a1e2939a6f07027e6fa0449271ee1 551 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 326 550 5.6E-77 T 09-03-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 NA29_RS14315 771a1e2939a6f07027e6fa0449271ee1 551 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 09-03-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 NA29_RS25305 3c8d89010de9b25f5ef7bcf9d2f0648c 281 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 26 259 2.4E-45 T 09-03-2017 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 NA29_RS25305 3c8d89010de9b25f5ef7bcf9d2f0648c 281 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 128 139 - T 09-03-2017 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 NA29_RS25305 3c8d89010de9b25f5ef7bcf9d2f0648c 281 SUPERFAMILY SSF56534 9 262 2.62E-102 T 09-03-2017 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 NA29_RS25305 3c8d89010de9b25f5ef7bcf9d2f0648c 281 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 222 241 3.4E-10 T 09-03-2017 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 NA29_RS25305 3c8d89010de9b25f5ef7bcf9d2f0648c 281 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 190 208 3.4E-10 T 09-03-2017 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 NA29_RS25305 3c8d89010de9b25f5ef7bcf9d2f0648c 281 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 85 107 3.4E-10 T 09-03-2017 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 NA29_RS25305 3c8d89010de9b25f5ef7bcf9d2f0648c 281 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 20 265 1.3E-109 T 09-03-2017 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 NA29_RS25305 3c8d89010de9b25f5ef7bcf9d2f0648c 281 Gene3D G3DSA:1.10.800.10 11 269 1.9E-96 T 09-03-2017 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 NA29_RS23460 a8701fbc4a6abffacdfce6cdf24dda7e 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 256 8.8E-113 T 09-03-2017 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 NA29_RS23460 a8701fbc4a6abffacdfce6cdf24dda7e 257 SUPERFAMILY SSF51366 3 256 6.67E-84 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NA29_RS23460 a8701fbc4a6abffacdfce6cdf24dda7e 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 48.514 T 09-03-2017 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 NA29_RS23460 a8701fbc4a6abffacdfce6cdf24dda7e 257 Pfam PF00977 Histidine biosynthesis protein 6 239 8.4E-91 T 09-03-2017 IPR006062 Histidine biosynthesis GO:0000105 NA29_RS23460 a8701fbc4a6abffacdfce6cdf24dda7e 257 Gene3D G3DSA:3.20.20.70 5 257 1.3E-108 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS16825 fc8f5d19d8f98284681c494773bd50aa 265 Gene3D G3DSA:3.40.190.10 219 262 6.8E-37 T 09-03-2017 NA29_RS16825 fc8f5d19d8f98284681c494773bd50aa 265 Gene3D G3DSA:3.40.190.10 38 118 6.8E-37 T 09-03-2017 NA29_RS16825 fc8f5d19d8f98284681c494773bd50aa 265 SMART SM00062 41 260 5.4E-50 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS16825 fc8f5d19d8f98284681c494773bd50aa 265 SUPERFAMILY SSF53850 16 260 1.43E-59 T 09-03-2017 NA29_RS16825 fc8f5d19d8f98284681c494773bd50aa 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 258 6.0E-55 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS16825 fc8f5d19d8f98284681c494773bd50aa 265 Gene3D G3DSA:3.40.190.10 119 208 1.1E-20 T 09-03-2017 NA29_RS11695 34710acdeac4c990862ca4ef8f9a49fe 543 ProSitePatterns PS00211 ABC transporters family signature. 452 466 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS11695 34710acdeac4c990862ca4ef8f9a49fe 543 Gene3D G3DSA:3.40.50.300 319 541 6.5E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11695 34710acdeac4c990862ca4ef8f9a49fe 543 SUPERFAMILY SSF90123 2 282 1.44E-31 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NA29_RS11695 34710acdeac4c990862ca4ef8f9a49fe 543 Pfam PF00664 ABC transporter transmembrane region 10 238 4.3E-12 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NA29_RS11695 34710acdeac4c990862ca4ef8f9a49fe 543 SMART SM00382 344 528 5.3E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS11695 34710acdeac4c990862ca4ef8f9a49fe 543 Pfam PF00005 ABC transporter 335 482 1.5E-25 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS11695 34710acdeac4c990862ca4ef8f9a49fe 543 SUPERFAMILY SSF52540 315 541 3.39E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11695 34710acdeac4c990862ca4ef8f9a49fe 543 Gene3D G3DSA:1.20.1560.10 2 287 1.4E-28 T 09-03-2017 NA29_RS15940 1d1dbc71ab40386c4b0432a40ad1ae89 308 SUPERFAMILY SSF48179 179 305 2.61E-41 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS15940 1d1dbc71ab40386c4b0432a40ad1ae89 308 Gene3D G3DSA:1.10.1040.10 181 303 4.9E-43 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS15940 1d1dbc71ab40386c4b0432a40ad1ae89 308 PIRSF PIRSF000103 11 308 5.5E-73 T 09-03-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 NA29_RS15940 1d1dbc71ab40386c4b0432a40ad1ae89 308 SUPERFAMILY SSF51735 17 179 1.31E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS15940 1d1dbc71ab40386c4b0432a40ad1ae89 308 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 19 178 1.6E-47 T 09-03-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 NA29_RS15940 1d1dbc71ab40386c4b0432a40ad1ae89 308 Gene3D G3DSA:3.40.50.720 16 179 1.6E-53 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS15940 1d1dbc71ab40386c4b0432a40ad1ae89 308 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 181 299 7.2E-34 T 09-03-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 NA29_RS15940 1d1dbc71ab40386c4b0432a40ad1ae89 308 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 21 34 - T 09-03-2017 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 NA29_RS03555 79a5cc9668e0846bd44c49520a64711f 261 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 102 259 1.1E-9 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS03555 79a5cc9668e0846bd44c49520a64711f 261 SUPERFAMILY SSF56529 5 260 4.06E-73 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS03555 79a5cc9668e0846bd44c49520a64711f 261 Gene3D G3DSA:3.90.850.10 5 260 6.6E-84 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS17190 2b87c147974259fb405b670c6e130c77 244 Gene3D G3DSA:3.40.50.720 5 232 2.1E-65 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17190 2b87c147974259fb405b670c6e130c77 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 180 0.0069 T 09-03-2017 NA29_RS17190 2b87c147974259fb405b670c6e130c77 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS17190 2b87c147974259fb405b670c6e130c77 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.2E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17190 2b87c147974259fb405b670c6e130c77 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.2E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17190 2b87c147974259fb405b670c6e130c77 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 1.2E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17190 2b87c147974259fb405b670c6e130c77 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.7E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17190 2b87c147974259fb405b670c6e130c77 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.7E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17190 2b87c147974259fb405b670c6e130c77 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 2.7E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17190 2b87c147974259fb405b670c6e130c77 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 2.7E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17190 2b87c147974259fb405b670c6e130c77 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 2.7E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17190 2b87c147974259fb405b670c6e130c77 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 2.7E-32 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17190 2b87c147974259fb405b670c6e130c77 244 SUPERFAMILY SSF51735 6 228 4.87E-64 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17190 2b87c147974259fb405b670c6e130c77 244 Pfam PF00106 short chain dehydrogenase 9 192 1.1E-51 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS22670 eb948fbb99133697876cbc051a17d15b 195 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 6.0E-79 T 09-03-2017 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 NA29_RS22670 eb948fbb99133697876cbc051a17d15b 195 Gene3D G3DSA:3.40.50.880 2 188 1.3E-68 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS22670 eb948fbb99133697876cbc051a17d15b 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 6.2E-6 T 09-03-2017 NA29_RS22670 eb948fbb99133697876cbc051a17d15b 195 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 6.2E-6 T 09-03-2017 NA29_RS22670 eb948fbb99133697876cbc051a17d15b 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 2.5E-13 T 09-03-2017 NA29_RS22670 eb948fbb99133697876cbc051a17d15b 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 2.5E-13 T 09-03-2017 NA29_RS22670 eb948fbb99133697876cbc051a17d15b 195 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 2.5E-13 T 09-03-2017 NA29_RS22670 eb948fbb99133697876cbc051a17d15b 195 PRINTS PR00097 Anthranilate synthase component II signature 2 16 9.8E-35 T 09-03-2017 NA29_RS22670 eb948fbb99133697876cbc051a17d15b 195 PRINTS PR00097 Anthranilate synthase component II signature 99 107 9.8E-35 T 09-03-2017 NA29_RS22670 eb948fbb99133697876cbc051a17d15b 195 PRINTS PR00097 Anthranilate synthase component II signature 47 56 9.8E-35 T 09-03-2017 NA29_RS22670 eb948fbb99133697876cbc051a17d15b 195 PRINTS PR00097 Anthranilate synthase component II signature 74 85 9.8E-35 T 09-03-2017 NA29_RS22670 eb948fbb99133697876cbc051a17d15b 195 PRINTS PR00097 Anthranilate synthase component II signature 164 177 9.8E-35 T 09-03-2017 NA29_RS22670 eb948fbb99133697876cbc051a17d15b 195 PRINTS PR00097 Anthranilate synthase component II signature 119 131 9.8E-35 T 09-03-2017 NA29_RS22670 eb948fbb99133697876cbc051a17d15b 195 Pfam PF00117 Glutamine amidotransferase class-I 4 185 3.1E-54 T 09-03-2017 IPR017926 Glutamine amidotransferase NA29_RS22670 eb948fbb99133697876cbc051a17d15b 195 SUPERFAMILY SSF52317 1 188 2.2E-57 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS04275 6a90955fd3b7ee44af6a6c6f4d695941 485 Gene3D G3DSA:3.90.1300.10 8 478 6.3E-104 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS04275 6a90955fd3b7ee44af6a6c6f4d695941 485 ProSitePatterns PS00571 Amidases signature. 156 187 - T 09-03-2017 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 NA29_RS04275 6a90955fd3b7ee44af6a6c6f4d695941 485 SUPERFAMILY SSF75304 11 470 3.53E-107 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS04275 6a90955fd3b7ee44af6a6c6f4d695941 485 Pfam PF01425 Amidase 34 462 6.2E-81 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS23655 e5f8091143c9d256b60866e5d11afd73 242 Gene3D G3DSA:3.40.50.300 3 171 3.9E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23655 e5f8091143c9d256b60866e5d11afd73 242 Pfam PF01202 Shikimate kinase 11 167 5.7E-52 T 09-03-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 NA29_RS23655 e5f8091143c9d256b60866e5d11afd73 242 Hamap MF_00109 Shikimate kinase [aroK]. 2 168 29.713 T 09-03-2017 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 NA29_RS23655 e5f8091143c9d256b60866e5d11afd73 242 ProSitePatterns PS01128 Shikimate kinase signature. 58 83 - T 09-03-2017 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 NA29_RS23655 e5f8091143c9d256b60866e5d11afd73 242 PRINTS PR01100 Shikimate kinase family signature 75 84 1.8E-22 T 09-03-2017 NA29_RS23655 e5f8091143c9d256b60866e5d11afd73 242 PRINTS PR01100 Shikimate kinase family signature 29 42 1.8E-22 T 09-03-2017 NA29_RS23655 e5f8091143c9d256b60866e5d11afd73 242 PRINTS PR01100 Shikimate kinase family signature 57 65 1.8E-22 T 09-03-2017 NA29_RS23655 e5f8091143c9d256b60866e5d11afd73 242 PRINTS PR01100 Shikimate kinase family signature 5 20 1.8E-22 T 09-03-2017 NA29_RS23655 e5f8091143c9d256b60866e5d11afd73 242 PRINTS PR01100 Shikimate kinase family signature 96 113 1.8E-22 T 09-03-2017 NA29_RS23655 e5f8091143c9d256b60866e5d11afd73 242 SUPERFAMILY SSF52540 4 166 1.93E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24390 a14e4e6f514ce81ba782ffb3b7e889e8 328 Gene3D G3DSA:3.90.25.10 211 224 2.0E-9 T 09-03-2017 NA29_RS24390 a14e4e6f514ce81ba782ffb3b7e889e8 328 Gene3D G3DSA:3.90.25.10 305 320 2.0E-9 T 09-03-2017 NA29_RS24390 a14e4e6f514ce81ba782ffb3b7e889e8 328 Gene3D G3DSA:3.90.25.10 264 304 2.4E-37 T 09-03-2017 NA29_RS24390 a14e4e6f514ce81ba782ffb3b7e889e8 328 Gene3D G3DSA:3.90.25.10 174 210 2.4E-37 T 09-03-2017 NA29_RS24390 a14e4e6f514ce81ba782ffb3b7e889e8 328 SUPERFAMILY SSF51735 4 320 9.79E-71 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS24390 a14e4e6f514ce81ba782ffb3b7e889e8 328 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 319 48.455 T 09-03-2017 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|Reactome: R-HSA-6787639 NA29_RS24390 a14e4e6f514ce81ba782ffb3b7e889e8 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 232 3.9E-76 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NA29_RS24390 a14e4e6f514ce81ba782ffb3b7e889e8 328 Gene3D G3DSA:3.40.50.720 5 173 4.5E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS24390 a14e4e6f514ce81ba782ffb3b7e889e8 328 Gene3D G3DSA:3.40.50.720 225 263 4.5E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13605 3da35b3bc3bf0be3e57607d7675946b2 346 SMART SM00870 21 340 1.7E-128 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 NA29_RS13605 3da35b3bc3bf0be3e57607d7675946b2 346 Gene3D G3DSA:3.40.50.40 234 344 2.0E-35 T 09-03-2017 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 NA29_RS13605 3da35b3bc3bf0be3e57607d7675946b2 346 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 103 113 - T 09-03-2017 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 NA29_RS13605 3da35b3bc3bf0be3e57607d7675946b2 346 Gene3D G3DSA:3.40.50.1170 19 225 1.1E-69 T 09-03-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 NA29_RS13605 3da35b3bc3bf0be3e57607d7675946b2 346 PIRSF PIRSF001220 16 346 3.8E-86 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 NA29_RS13605 3da35b3bc3bf0be3e57607d7675946b2 346 PRINTS PR00139 Asparaginase/glutaminase family signature 102 120 3.4E-21 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 NA29_RS13605 3da35b3bc3bf0be3e57607d7675946b2 346 PRINTS PR00139 Asparaginase/glutaminase family signature 22 33 3.4E-21 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 NA29_RS13605 3da35b3bc3bf0be3e57607d7675946b2 346 PRINTS PR00139 Asparaginase/glutaminase family signature 280 298 3.4E-21 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 NA29_RS13605 3da35b3bc3bf0be3e57607d7675946b2 346 PIRSF PIRSF500176 18 345 6.5E-76 T 09-03-2017 NA29_RS13605 3da35b3bc3bf0be3e57607d7675946b2 346 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 24 32 - T 09-03-2017 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 NA29_RS13605 3da35b3bc3bf0be3e57607d7675946b2 346 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 16 346 5.8E-120 T 09-03-2017 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 NA29_RS13605 3da35b3bc3bf0be3e57607d7675946b2 346 SUPERFAMILY SSF53774 12 345 3.4E-101 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 NA29_RS13605 3da35b3bc3bf0be3e57607d7675946b2 346 Pfam PF00710 Asparaginase, N-terminal 21 214 9.8E-58 T 09-03-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 NA29_RS03695 2a599ff03f484d8d1383779fbeaa9fc1 401 SUPERFAMILY SSF52283 3 176 1.42E-62 T 09-03-2017 NA29_RS03695 2a599ff03f484d8d1383779fbeaa9fc1 401 Hamap MF_03210 Formate dehydrogenase, mitochondrial. 2 383 55.947 T 09-03-2017 IPR033689 NAD-dependent formate dehydrogenase GO:0008863 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 NA29_RS03695 2a599ff03f484d8d1383779fbeaa9fc1 401 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 274 290 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NA29_RS03695 2a599ff03f484d8d1383779fbeaa9fc1 401 Gene3D G3DSA:3.40.50.720 187 344 2.5E-30 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS03695 2a599ff03f484d8d1383779fbeaa9fc1 401 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 156 335 5.3E-51 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NA29_RS03695 2a599ff03f484d8d1383779fbeaa9fc1 401 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 61 362 1.0E-18 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 NA29_RS03695 2a599ff03f484d8d1383779fbeaa9fc1 401 Gene3D G3DSA:3.40.50.720 2 184 1.6E-84 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS03695 2a599ff03f484d8d1383779fbeaa9fc1 401 SUPERFAMILY SSF51735 150 336 9.88E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS19810 fccbf96c0c19f09e0380ee2609b15de5 688 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS19810 fccbf96c0c19f09e0380ee2609b15de5 688 Pfam PF02687 FtsX-like permease family 567 681 1.0E-23 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 NA29_RS19810 fccbf96c0c19f09e0380ee2609b15de5 688 SMART SM00382 37 224 1.3E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS19810 fccbf96c0c19f09e0380ee2609b15de5 688 Pfam PF12704 MacB-like periplasmic core domain 312 530 2.7E-31 T 09-03-2017 IPR025857 MacB-like periplasmic core domain NA29_RS19810 fccbf96c0c19f09e0380ee2609b15de5 688 Pfam PF00005 ABC transporter 28 176 3.5E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS19810 fccbf96c0c19f09e0380ee2609b15de5 688 SUPERFAMILY SSF52540 8 227 2.66E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19810 fccbf96c0c19f09e0380ee2609b15de5 688 Gene3D G3DSA:3.40.50.300 7 228 3.9E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23970 a0dab35dad3b7b6b6a042e85095a2448 317 SUPERFAMILY SSF56529 61 268 3.14E-49 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS23970 a0dab35dad3b7b6b6a042e85095a2448 317 Gene3D G3DSA:3.90.850.10 57 269 5.9E-51 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS23970 a0dab35dad3b7b6b6a042e85095a2448 317 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 79 268 6.8E-43 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS05915 3bb20b643c54e3c8022eac7d02c98ae1 242 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 2.2E-13 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS05915 3bb20b643c54e3c8022eac7d02c98ae1 242 Gene3D G3DSA:1.10.10.60 17 63 2.1E-21 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS05915 3bb20b643c54e3c8022eac7d02c98ae1 242 SUPERFAMILY SSF46689 17 91 3.44E-19 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS05915 3bb20b643c54e3c8022eac7d02c98ae1 242 SUPERFAMILY SSF48498 124 230 4.4E-11 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS05915 3bb20b643c54e3c8022eac7d02c98ae1 242 Gene3D G3DSA:1.10.357.10 64 236 2.2E-28 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS05915 3bb20b643c54e3c8022eac7d02c98ae1 242 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 2.0E-6 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS05915 3bb20b643c54e3c8022eac7d02c98ae1 242 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 2.0E-6 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS05915 3bb20b643c54e3c8022eac7d02c98ae1 242 Pfam PF09209 Domain of unknown function (DUF1956) 109 230 3.7E-14 T 09-03-2017 IPR015292 Transcription regulator YbiH, C-terminal NA29_RS24440 255eb96b2599806b1be5a6057f150cd3 199 Pfam PF02397 Bacterial sugar transferase 5 198 6.8E-52 T 09-03-2017 IPR003362 Bacterial sugar transferase NA29_RS22920 dbf4734fabf337575fe887458cd17a1b 459 Pfam PF13727 CoA-binding domain 57 226 9.2E-14 T 09-03-2017 NA29_RS22920 dbf4734fabf337575fe887458cd17a1b 459 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 20 458 8.2E-123 T 09-03-2017 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase NA29_RS22920 dbf4734fabf337575fe887458cd17a1b 459 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 31 458 5.3E-136 T 09-03-2017 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 NA29_RS22920 dbf4734fabf337575fe887458cd17a1b 459 Pfam PF02397 Bacterial sugar transferase 262 453 1.4E-56 T 09-03-2017 IPR003362 Bacterial sugar transferase NA29_RS02435 4893eea35a37fe389aaea2acd57c2fb6 248 SUPERFAMILY SSF53254 1 244 8.98E-79 T 09-03-2017 IPR029033 Histidine phosphatase superfamily NA29_RS02435 4893eea35a37fe389aaea2acd57c2fb6 248 SMART SM00855 3 189 1.2E-27 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 NA29_RS02435 4893eea35a37fe389aaea2acd57c2fb6 248 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 46.3 T 09-03-2017 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 NA29_RS02435 4893eea35a37fe389aaea2acd57c2fb6 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 123 1.6E-29 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 NA29_RS02435 4893eea35a37fe389aaea2acd57c2fb6 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 141 219 8.4E-6 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 NA29_RS02435 4893eea35a37fe389aaea2acd57c2fb6 248 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 246 4.4E-121 T 09-03-2017 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 NA29_RS02435 4893eea35a37fe389aaea2acd57c2fb6 248 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 09-03-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 NA29_RS02435 4893eea35a37fe389aaea2acd57c2fb6 248 Gene3D G3DSA:3.40.50.1240 1 248 7.6E-100 T 09-03-2017 IPR029033 Histidine phosphatase superfamily NA29_RS22730 730736d3dc8f8e0de9101076fbbe2338 254 SUPERFAMILY SSF54423 48 98 1.96E-9 T 09-03-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal NA29_RS22730 730736d3dc8f8e0de9101076fbbe2338 254 Pfam PF10411 Disulfide bond isomerase protein N-terminus 41 96 2.4E-17 T 09-03-2017 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal NA29_RS22730 730736d3dc8f8e0de9101076fbbe2338 254 Gene3D G3DSA:3.40.30.10 121 252 2.8E-43 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS22730 730736d3dc8f8e0de9101076fbbe2338 254 Gene3D G3DSA:3.10.450.70 39 100 3.4E-14 T 09-03-2017 IPR009094 Disulphide bond isomerase, DsbC, N-terminal NA29_RS22730 730736d3dc8f8e0de9101076fbbe2338 254 SUPERFAMILY SSF52833 105 251 1.8E-39 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS22730 730736d3dc8f8e0de9101076fbbe2338 254 Pfam PF13098 Thioredoxin-like domain 124 250 2.4E-31 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS22730 730736d3dc8f8e0de9101076fbbe2338 254 ProSitePatterns PS00194 Thioredoxin family active site. 132 150 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 NA29_RS18655 b56612d969c289e1e47d19aaa68fc754 254 SUPERFAMILY SSF55781 86 247 1.18E-44 T 09-03-2017 IPR029016 GAF domain-like NA29_RS18655 b56612d969c289e1e47d19aaa68fc754 254 Gene3D G3DSA:1.10.10.10 9 80 2.0E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18655 b56612d969c289e1e47d19aaa68fc754 254 SUPERFAMILY SSF46785 11 79 8.14E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18655 b56612d969c289e1e47d19aaa68fc754 254 Pfam PF01614 Bacterial transcriptional regulator 127 248 4.4E-29 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS18655 b56612d969c289e1e47d19aaa68fc754 254 SMART SM00346 8 98 1.1E-8 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS18655 b56612d969c289e1e47d19aaa68fc754 254 Gene3D G3DSA:3.30.450.40 89 252 4.9E-51 T 09-03-2017 IPR029016 GAF domain-like NA29_RS18655 b56612d969c289e1e47d19aaa68fc754 254 Pfam PF09339 IclR helix-turn-helix domain 10 53 3.3E-10 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS22630 bb51c8a415d6ea2041f94cdbd7028cd7 357 Gene3D G3DSA:2.40.50.100 49 82 1.8E-13 T 09-03-2017 NA29_RS22630 bb51c8a415d6ea2041f94cdbd7028cd7 357 Gene3D G3DSA:2.40.50.100 213 246 1.8E-13 T 09-03-2017 NA29_RS22630 bb51c8a415d6ea2041f94cdbd7028cd7 357 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 300 5.4E-14 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NA29_RS22630 bb51c8a415d6ea2041f94cdbd7028cd7 357 SUPERFAMILY SSF111369 43 104 3.66E-7 T 09-03-2017 NA29_RS22630 bb51c8a415d6ea2041f94cdbd7028cd7 357 SUPERFAMILY SSF111369 192 294 5.89E-7 T 09-03-2017 NA29_RS22630 bb51c8a415d6ea2041f94cdbd7028cd7 357 SUPERFAMILY SSF111369 116 156 5.89E-7 T 09-03-2017 NA29_RS22630 bb51c8a415d6ea2041f94cdbd7028cd7 357 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 344 3.7E-8 T 09-03-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NA29_RS22630 bb51c8a415d6ea2041f94cdbd7028cd7 357 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 60 80 3.7E-8 T 09-03-2017 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 NA29_RS07435 60e6b4d9c0310100fbe04c09bcc698bd 389 SUPERFAMILY SSF54373 175 275 2.55E-8 T 09-03-2017 NA29_RS07435 60e6b4d9c0310100fbe04c09bcc698bd 389 Pfam PF01494 FAD binding domain 6 345 4.5E-26 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 NA29_RS07435 60e6b4d9c0310100fbe04c09bcc698bd 389 SUPERFAMILY SSF51905 270 369 4.4E-61 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07435 60e6b4d9c0310100fbe04c09bcc698bd 389 SUPERFAMILY SSF51905 4 171 4.4E-61 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07435 60e6b4d9c0310100fbe04c09bcc698bd 389 Gene3D G3DSA:3.50.50.60 270 353 4.4E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07435 60e6b4d9c0310100fbe04c09bcc698bd 389 Gene3D G3DSA:3.50.50.60 3 177 4.4E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07435 60e6b4d9c0310100fbe04c09bcc698bd 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 150 165 6.4E-20 T 09-03-2017 NA29_RS07435 60e6b4d9c0310100fbe04c09bcc698bd 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 6.4E-20 T 09-03-2017 NA29_RS07435 60e6b4d9c0310100fbe04c09bcc698bd 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 6.4E-20 T 09-03-2017 NA29_RS07435 60e6b4d9c0310100fbe04c09bcc698bd 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 333 349 6.4E-20 T 09-03-2017 NA29_RS07435 60e6b4d9c0310100fbe04c09bcc698bd 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 6.4E-20 T 09-03-2017 NA29_RS05080 1a41909db4baf783b8e23f58b5ed9d7e 280 Gene3D G3DSA:1.10.230.10 125 225 4.1E-13 T 09-03-2017 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 NA29_RS05080 1a41909db4baf783b8e23f58b5ed9d7e 280 Gene3D G3DSA:1.10.580.10 17 62 2.2E-9 T 09-03-2017 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 NA29_RS05080 1a41909db4baf783b8e23f58b5ed9d7e 280 SUPERFAMILY SSF48256 14 259 5.63E-50 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS05080 1a41909db4baf783b8e23f58b5ed9d7e 280 Pfam PF00285 Citrate synthase, C-terminal domain 58 255 2.9E-31 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS05080 1a41909db4baf783b8e23f58b5ed9d7e 280 Pfam PF00285 Citrate synthase, C-terminal domain 16 63 1.5E-6 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS05080 1a41909db4baf783b8e23f58b5ed9d7e 280 Gene3D G3DSA:1.10.580.10 63 124 6.3E-11 T 09-03-2017 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 NA29_RS10425 2c8654f6f745ef4f22516c3d1b57550a 140 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 37.917 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 NA29_RS10425 2c8654f6f745ef4f22516c3d1b57550a 140 SUPERFAMILY SSF51316 4 132 4.03E-59 T 09-03-2017 IPR011057 Mss4-like NA29_RS10425 2c8654f6f745ef4f22516c3d1b57550a 140 Gene3D G3DSA:2.170.150.20 3 132 3.2E-63 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 NA29_RS10425 2c8654f6f745ef4f22516c3d1b57550a 140 Pfam PF01641 SelR domain 10 128 6.5E-54 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 NA29_RS10425 2c8654f6f745ef4f22516c3d1b57550a 140 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 131 1.7E-58 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 Pfam PF00012 Hsp70 protein 21 605 1.2E-179 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 SUPERFAMILY SSF53067 19 195 1.88E-53 T 09-03-2017 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 620 1.1E-281 T 09-03-2017 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 204 217 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 PRINTS PR00301 70kDa heat shock protein signature 20 33 6.2E-57 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 PRINTS PR00301 70kDa heat shock protein signature 334 350 6.2E-57 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 PRINTS PR00301 70kDa heat shock protein signature 472 488 6.2E-57 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 PRINTS PR00301 70kDa heat shock protein signature 48 60 6.2E-57 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 PRINTS PR00301 70kDa heat shock protein signature 151 171 6.2E-57 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 PRINTS PR00301 70kDa heat shock protein signature 71 79 6.2E-57 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 PRINTS PR00301 70kDa heat shock protein signature 210 220 6.2E-57 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 PRINTS PR00301 70kDa heat shock protein signature 365 385 6.2E-57 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 PRINTS PR00301 70kDa heat shock protein signature 391 410 6.2E-57 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 Gene3D G3DSA:3.30.30.30 64 98 3.9E-7 T 09-03-2017 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 SUPERFAMILY SSF100934 510 620 7.06E-34 T 09-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 Gene3D G3DSA:3.30.420.40 205 237 6.4E-30 T 09-03-2017 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 Gene3D G3DSA:3.30.420.40 319 361 6.4E-30 T 09-03-2017 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 SUPERFAMILY SSF53067 200 381 1.22E-50 T 09-03-2017 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 Gene3D G3DSA:3.30.420.40 114 204 2.0E-52 T 09-03-2017 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 Gene3D G3DSA:3.30.420.40 9 48 2.0E-52 T 09-03-2017 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 Gene3D G3DSA:2.60.34.10 393 534 6.0E-51 T 09-03-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 SUPERFAMILY SSF100920 388 543 2.88E-47 T 09-03-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 Gene3D G3DSA:1.20.1270.10 535 619 7.3E-29 T 09-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 Gene3D G3DSA:3.90.640.10 238 315 1.2E-9 T 09-03-2017 NA29_RS15325 4d3feeafc88dfc36cd6c616a034e243b 625 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 622 43.681 T 09-03-2017 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 NA29_RS11815 f6c7c3ffe4fdc55d35c1bb8049bbb7a6 250 Gene3D G3DSA:1.10.10.10 18 78 1.4E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11815 f6c7c3ffe4fdc55d35c1bb8049bbb7a6 250 SUPERFAMILY SSF46785 16 95 9.7E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11815 f6c7c3ffe4fdc55d35c1bb8049bbb7a6 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 9.7E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS11815 f6c7c3ffe4fdc55d35c1bb8049bbb7a6 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 9.7E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS11815 f6c7c3ffe4fdc55d35c1bb8049bbb7a6 250 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 12 247 3.8E-72 T 09-03-2017 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF NA29_RS11815 f6c7c3ffe4fdc55d35c1bb8049bbb7a6 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 3.1E-15 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS11815 f6c7c3ffe4fdc55d35c1bb8049bbb7a6 250 SUPERFAMILY SSF64288 70 247 1.57E-38 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain NA29_RS11815 f6c7c3ffe4fdc55d35c1bb8049bbb7a6 250 SMART SM00866 103 243 1.7E-27 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 NA29_RS11815 f6c7c3ffe4fdc55d35c1bb8049bbb7a6 250 Pfam PF07702 UTRA domain 104 242 1.2E-25 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 NA29_RS11815 f6c7c3ffe4fdc55d35c1bb8049bbb7a6 250 Gene3D G3DSA:3.40.1410.10 79 247 7.3E-36 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain NA29_RS11815 f6c7c3ffe4fdc55d35c1bb8049bbb7a6 250 SMART SM00345 23 82 5.1E-15 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS00350 d18bf80cd011088528127804717112d7 463 Pfam PF00860 Permease family 46 405 1.5E-31 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 NA29_RS21700 3975cc8f7d31b2dcf66351929823bb9e 388 PIRSF PIRSF001554 1 388 1.1E-153 T 09-03-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 NA29_RS21700 3975cc8f7d31b2dcf66351929823bb9e 388 Pfam PF00549 CoA-ligase 262 382 2.4E-24 T 09-03-2017 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 NA29_RS21700 3975cc8f7d31b2dcf66351929823bb9e 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 41.451 T 09-03-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 NA29_RS21700 3975cc8f7d31b2dcf66351929823bb9e 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 09-03-2017 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 NA29_RS21700 3975cc8f7d31b2dcf66351929823bb9e 388 Gene3D G3DSA:3.30.1490.20 22 95 3.0E-36 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NA29_RS21700 3975cc8f7d31b2dcf66351929823bb9e 388 SUPERFAMILY SSF52210 239 384 1.11E-54 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 NA29_RS21700 3975cc8f7d31b2dcf66351929823bb9e 388 Pfam PF08442 ATP-grasp domain 2 202 6.2E-79 T 09-03-2017 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 NA29_RS21700 3975cc8f7d31b2dcf66351929823bb9e 388 Gene3D G3DSA:3.30.470.20 96 239 7.8E-57 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS21700 3975cc8f7d31b2dcf66351929823bb9e 388 Gene3D G3DSA:3.40.50.261 241 383 7.2E-66 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 NA29_RS21700 3975cc8f7d31b2dcf66351929823bb9e 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.4E-156 T 09-03-2017 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 NA29_RS21700 3975cc8f7d31b2dcf66351929823bb9e 388 SUPERFAMILY SSF56059 1 238 1.66E-82 T 09-03-2017 NA29_RS25215 8752ff890c6d2ddec2230f9cbb59b311 300 Gene3D G3DSA:3.40.190.10 96 178 2.3E-24 T 09-03-2017 NA29_RS25215 8752ff890c6d2ddec2230f9cbb59b311 300 SUPERFAMILY SSF53850 96 296 4.16E-39 T 09-03-2017 NA29_RS25215 8752ff890c6d2ddec2230f9cbb59b311 300 Pfam PF03466 LysR substrate binding domain 96 292 1.5E-35 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS25215 8752ff890c6d2ddec2230f9cbb59b311 300 Gene3D G3DSA:3.40.190.10 179 264 1.3E-13 T 09-03-2017 NA29_RS25215 8752ff890c6d2ddec2230f9cbb59b311 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 1.5E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS25215 8752ff890c6d2ddec2230f9cbb59b311 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 6.1E-11 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS25215 8752ff890c6d2ddec2230f9cbb59b311 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 6.1E-11 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS25215 8752ff890c6d2ddec2230f9cbb59b311 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 6.1E-11 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS25215 8752ff890c6d2ddec2230f9cbb59b311 300 Gene3D G3DSA:1.10.10.10 7 87 2.6E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS25215 8752ff890c6d2ddec2230f9cbb59b311 300 SUPERFAMILY SSF46785 6 86 2.02E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16080 42db11ab820aae4c9f9f9affe2db56ae 415 Pfam PF01547 Bacterial extracellular solute-binding protein 43 327 3.1E-34 T 09-03-2017 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 NA29_RS16080 42db11ab820aae4c9f9f9affe2db56ae 415 SUPERFAMILY SSF53850 39 406 1.98E-68 T 09-03-2017 NA29_RS16080 42db11ab820aae4c9f9f9affe2db56ae 415 Gene3D G3DSA:3.40.190.10 43 156 2.3E-17 T 09-03-2017 NA29_RS16080 42db11ab820aae4c9f9f9affe2db56ae 415 Gene3D G3DSA:3.40.190.10 157 347 9.3E-44 T 09-03-2017 NA29_RS14925 97d1936fe8b29bf663e3f30daa5245cb 215 SUPERFAMILY SSF52833 1 97 1.67E-19 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS14925 97d1936fe8b29bf663e3f30daa5245cb 215 Gene3D G3DSA:1.20.1050.10 81 210 4.8E-28 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS14925 97d1936fe8b29bf663e3f30daa5245cb 215 SUPERFAMILY SSF47616 74 207 3.55E-12 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS14925 97d1936fe8b29bf663e3f30daa5245cb 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 1.3E-18 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS14925 97d1936fe8b29bf663e3f30daa5245cb 215 Gene3D G3DSA:3.40.30.10 1 78 6.0E-22 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS14135 1c767cd52e4cda548620505d331d4db5 217 SUPERFAMILY SSF46689 27 106 1.54E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS14135 1c767cd52e4cda548620505d331d4db5 217 Gene3D G3DSA:1.10.357.10 31 213 1.7E-22 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS14135 1c767cd52e4cda548620505d331d4db5 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 37 81 4.3E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS14135 1c767cd52e4cda548620505d331d4db5 217 ProSitePatterns PS01081 TetR-type HTH domain signature. 49 80 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NA29_RS03225 4d74fda2c81e76d1a53f2f3b36baa629 223 SUPERFAMILY SSF47616 91 210 6.82E-10 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS03225 4d74fda2c81e76d1a53f2f3b36baa629 223 Pfam PF13417 Glutathione S-transferase, N-terminal domain 18 88 3.5E-13 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS03225 4d74fda2c81e76d1a53f2f3b36baa629 223 SUPERFAMILY SSF52833 16 93 6.23E-19 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS03225 4d74fda2c81e76d1a53f2f3b36baa629 223 Gene3D G3DSA:1.20.1050.10 105 209 2.2E-36 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS03225 4d74fda2c81e76d1a53f2f3b36baa629 223 Pfam PF14834 Glutathione S-transferase, C-terminal domain 95 208 1.1E-40 T 09-03-2017 NA29_RS03225 4d74fda2c81e76d1a53f2f3b36baa629 223 Gene3D G3DSA:3.40.30.10 7 104 1.1E-23 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS15270 a84c7fed576cb061f289b57a97b3aabd 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.9E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS15270 a84c7fed576cb061f289b57a97b3aabd 298 Gene3D G3DSA:1.10.10.10 1 84 3.6E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15270 a84c7fed576cb061f289b57a97b3aabd 298 Gene3D G3DSA:3.40.190.10 85 195 1.3E-26 T 09-03-2017 NA29_RS15270 a84c7fed576cb061f289b57a97b3aabd 298 Gene3D G3DSA:3.40.190.10 196 260 6.9E-10 T 09-03-2017 NA29_RS15270 a84c7fed576cb061f289b57a97b3aabd 298 Pfam PF03466 LysR substrate binding domain 86 291 4.4E-38 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS15270 a84c7fed576cb061f289b57a97b3aabd 298 SUPERFAMILY SSF53850 87 296 1.54E-37 T 09-03-2017 NA29_RS15270 a84c7fed576cb061f289b57a97b3aabd 298 SUPERFAMILY SSF46785 1 110 1.41E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17715 f77803b1a509b394f39cfe2ab3a20d3a 644 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 178 1.1E-28 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS17715 f77803b1a509b394f39cfe2ab3a20d3a 644 Gene3D G3DSA:2.40.170.20 184 642 9.0E-79 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS17715 f77803b1a509b394f39cfe2ab3a20d3a 644 Pfam PF00593 TonB dependent receptor 423 642 5.5E-31 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS17715 f77803b1a509b394f39cfe2ab3a20d3a 644 Gene3D G3DSA:2.170.130.10 49 183 1.8E-38 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS17715 f77803b1a509b394f39cfe2ab3a20d3a 644 SUPERFAMILY SSF56935 61 642 1.62E-114 T 09-03-2017 NA29_RS13405 e8310bf41a1756aa316dc6f0a22fb6b3 440 Pfam PF00463 Isocitrate lyase family 254 426 3.2E-45 T 09-03-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 NA29_RS13405 e8310bf41a1756aa316dc6f0a22fb6b3 440 Pfam PF00463 Isocitrate lyase family 13 253 2.7E-59 T 09-03-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 NA29_RS13405 e8310bf41a1756aa316dc6f0a22fb6b3 440 SUPERFAMILY SSF51621 4 429 1.03E-157 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS13405 e8310bf41a1756aa316dc6f0a22fb6b3 440 Gene3D G3DSA:3.20.20.60 4 412 1.2E-166 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS13405 e8310bf41a1756aa316dc6f0a22fb6b3 440 ProSitePatterns PS00161 Isocitrate lyase signature. 191 196 - T 09-03-2017 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 NA29_RS13405 e8310bf41a1756aa316dc6f0a22fb6b3 440 PIRSF PIRSF001362 1 432 8.5E-235 T 09-03-2017 NA29_RS13405 e8310bf41a1756aa316dc6f0a22fb6b3 440 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 253 5.6E-112 T 09-03-2017 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 NA29_RS20340 9c587745d03686431c2de23f33890d82 380 SUPERFAMILY SSF49493 264 350 9.29E-23 T 09-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 NA29_RS20340 9c587745d03686431c2de23f33890d82 380 Gene3D G3DSA:2.60.260.20 217 260 2.3E-20 T 09-03-2017 NA29_RS20340 9c587745d03686431c2de23f33890d82 380 Gene3D G3DSA:2.60.260.20 113 147 2.3E-20 T 09-03-2017 NA29_RS20340 9c587745d03686431c2de23f33890d82 380 SUPERFAMILY SSF57938 140 216 6.02E-22 T 09-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 NA29_RS20340 9c587745d03686431c2de23f33890d82 380 Gene3D G3DSA:2.60.260.20 262 339 1.8E-23 T 09-03-2017 NA29_RS20340 9c587745d03686431c2de23f33890d82 380 Gene3D G3DSA:2.10.230.10 148 216 2.2E-24 T 09-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 NA29_RS20340 9c587745d03686431c2de23f33890d82 380 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 354 1.4E-136 T 09-03-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 NA29_RS20340 9c587745d03686431c2de23f33890d82 380 SUPERFAMILY SSF49493 121 178 9.55E-19 T 09-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 NA29_RS20340 9c587745d03686431c2de23f33890d82 380 SUPERFAMILY SSF49493 220 262 9.55E-19 T 09-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 NA29_RS20340 9c587745d03686431c2de23f33890d82 380 Gene3D G3DSA:1.10.287.110 1 104 2.9E-39 T 09-03-2017 IPR001623 DnaJ domain NA29_RS20340 9c587745d03686431c2de23f33890d82 380 Pfam PF00226 DnaJ domain 5 67 3.4E-29 T 09-03-2017 IPR001623 DnaJ domain NA29_RS20340 9c587745d03686431c2de23f33890d82 380 SUPERFAMILY SSF46565 1 111 4.71E-38 T 09-03-2017 IPR001623 DnaJ domain NA29_RS20340 9c587745d03686431c2de23f33890d82 380 Pfam PF00684 DnaJ central domain 153 213 8.0E-15 T 09-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 NA29_RS20340 9c587745d03686431c2de23f33890d82 380 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 378 42.083 T 09-03-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 NA29_RS20340 9c587745d03686431c2de23f33890d82 380 PRINTS PR00625 DnaJ domain signature 25 40 1.3E-33 T 09-03-2017 IPR001623 DnaJ domain NA29_RS20340 9c587745d03686431c2de23f33890d82 380 PRINTS PR00625 DnaJ domain signature 42 62 1.3E-33 T 09-03-2017 IPR001623 DnaJ domain NA29_RS20340 9c587745d03686431c2de23f33890d82 380 PRINTS PR00625 DnaJ domain signature 7 25 1.3E-33 T 09-03-2017 IPR001623 DnaJ domain NA29_RS20340 9c587745d03686431c2de23f33890d82 380 PRINTS PR00625 DnaJ domain signature 62 81 1.3E-33 T 09-03-2017 IPR001623 DnaJ domain NA29_RS20340 9c587745d03686431c2de23f33890d82 380 Pfam PF01556 DnaJ C terminal domain 127 339 7.0E-42 T 09-03-2017 IPR002939 Chaperone DnaJ, C-terminal NA29_RS20340 9c587745d03686431c2de23f33890d82 380 SMART SM00271 4 62 2.2E-32 T 09-03-2017 IPR001623 DnaJ domain NA29_RS06015 08c594ef4b9a714528901e10ddd3272d 365 Pfam PF00296 Luciferase-like monooxygenase 15 323 7.1E-79 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS06015 08c594ef4b9a714528901e10ddd3272d 365 Gene3D G3DSA:3.20.20.30 1 356 5.3E-98 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS06015 08c594ef4b9a714528901e10ddd3272d 365 SUPERFAMILY SSF51679 1 355 3.93E-88 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS04960 7d88a93f566346462c3624f334086469 660 ProSitePatterns PS00455 Putative AMP-binding domain signature. 267 278 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS04960 7d88a93f566346462c3624f334086469 660 Pfam PF13193 AMP-binding enzyme C-terminal domain 544 625 3.2E-27 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS04960 7d88a93f566346462c3624f334086469 660 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 9 660 51.491 T 09-03-2017 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 NA29_RS04960 7d88a93f566346462c3624f334086469 660 Gene3D G3DSA:2.30.38.10 451 529 3.8E-8 T 09-03-2017 NA29_RS04960 7d88a93f566346462c3624f334086469 660 Gene3D G3DSA:3.30.300.30 530 638 1.4E-26 T 09-03-2017 NA29_RS04960 7d88a93f566346462c3624f334086469 660 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 32 87 3.2E-21 T 09-03-2017 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 NA29_RS04960 7d88a93f566346462c3624f334086469 660 Gene3D G3DSA:3.40.50.980 86 272 8.5E-40 T 09-03-2017 NA29_RS04960 7d88a93f566346462c3624f334086469 660 Gene3D G3DSA:3.40.50.980 273 435 4.0E-29 T 09-03-2017 NA29_RS04960 7d88a93f566346462c3624f334086469 660 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 28 658 2.4E-294 T 09-03-2017 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 NA29_RS04960 7d88a93f566346462c3624f334086469 660 Pfam PF00501 AMP-binding enzyme 96 535 2.5E-90 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS04960 7d88a93f566346462c3624f334086469 660 SUPERFAMILY SSF56801 15 656 4.84E-173 T 09-03-2017 NA29_RS06050 88e4c6dea2c0448884fb3f173dc723de 737 Pfam PF03212 Pertactin 316 429 3.7E-21 T 09-03-2017 IPR004899 Pertactin, central region NA29_RS06050 88e4c6dea2c0448884fb3f173dc723de 737 PRINTS PR01484 Pertactin virulence factor family signature 452 470 2.6E-25 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 NA29_RS06050 88e4c6dea2c0448884fb3f173dc723de 737 PRINTS PR01484 Pertactin virulence factor family signature 626 649 2.6E-25 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 NA29_RS06050 88e4c6dea2c0448884fb3f173dc723de 737 PRINTS PR01484 Pertactin virulence factor family signature 717 737 2.6E-25 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 NA29_RS06050 88e4c6dea2c0448884fb3f173dc723de 737 PRINTS PR01484 Pertactin virulence factor family signature 692 717 2.6E-25 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 NA29_RS06050 88e4c6dea2c0448884fb3f173dc723de 737 PRINTS PR01484 Pertactin virulence factor family signature 515 539 2.6E-25 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 NA29_RS06050 88e4c6dea2c0448884fb3f173dc723de 737 PRINTS PR01484 Pertactin virulence factor family signature 607 624 2.6E-25 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 NA29_RS06050 88e4c6dea2c0448884fb3f173dc723de 737 Pfam PF03797 Autotransporter beta-domain 473 719 4.1E-48 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS06050 88e4c6dea2c0448884fb3f173dc723de 737 SMART SM00869 473 726 2.9E-43 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS06050 88e4c6dea2c0448884fb3f173dc723de 737 Gene3D G3DSA:2.160.20.20 11 429 4.9E-40 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS06050 88e4c6dea2c0448884fb3f173dc723de 737 SUPERFAMILY SSF103515 447 737 7.19E-55 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS06050 88e4c6dea2c0448884fb3f173dc723de 737 Gene3D G3DSA:2.40.128.130 437 737 1.1E-80 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS06050 88e4c6dea2c0448884fb3f173dc723de 737 SUPERFAMILY SSF51126 11 430 1.18E-27 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS06050 88e4c6dea2c0448884fb3f173dc723de 737 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 330 737 2.4E-91 T 09-03-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 NA29_RS11920 0a656765dccc7c39072bf29c53f51172 571 Gene3D G3DSA:3.50.50.60 194 378 1.6E-23 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS11920 0a656765dccc7c39072bf29c53f51172 571 Gene3D G3DSA:3.50.50.60 52 119 1.6E-23 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS11920 0a656765dccc7c39072bf29c53f51172 571 SUPERFAMILY SSF51905 47 381 1.04E-24 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS11920 0a656765dccc7c39072bf29c53f51172 571 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 53 538 2.3E-200 T 09-03-2017 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 NA29_RS11920 0a656765dccc7c39072bf29c53f51172 571 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 49 540 51.504 T 09-03-2017 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 NA29_RS11920 0a656765dccc7c39072bf29c53f51172 571 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 52 540 7.7E-222 T 09-03-2017 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 Gene3D G3DSA:1.10.730.10 661 844 1.9E-40 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 SUPERFAMILY SSF52374 12 203 2.82E-128 T 09-03-2017 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 SUPERFAMILY SSF52374 412 668 2.82E-128 T 09-03-2017 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 6 936 20.209 T 09-03-2017 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 Pfam PF08264 Anticodon-binding domain of tRNA 705 857 2.8E-25 T 09-03-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 19 859 4.4E-260 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 SUPERFAMILY SSF47323 672 935 3.92E-70 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 Pfam PF06827 Zinc finger found in FPG and IleRS 906 933 2.3E-8 T 09-03-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 Gene3D G3DSA:3.90.740.10 209 398 5.2E-49 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 SUPERFAMILY SSF50677 207 412 3.27E-49 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 62 73 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 55 66 1.7E-31 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 581 590 1.7E-31 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 410 425 1.7E-31 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 240 263 1.7E-31 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 545 558 1.7E-31 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 Gene3D G3DSA:3.40.50.620 21 206 3.1E-127 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 Gene3D G3DSA:3.40.50.620 412 656 3.1E-127 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS19935 7d046f99d55f9ab2c2641157aa79558e 945 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 32 661 7.1E-209 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS18250 4c073bda01091d72c588eef3cedbd157 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 3.3E-34 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS18250 4c073bda01091d72c588eef3cedbd157 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 3.3E-34 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS18250 4c073bda01091d72c588eef3cedbd157 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 3.3E-34 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS18250 4c073bda01091d72c588eef3cedbd157 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 3.3E-34 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS18250 4c073bda01091d72c588eef3cedbd157 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 3.3E-34 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS18250 4c073bda01091d72c588eef3cedbd157 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 3.3E-34 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS18250 4c073bda01091d72c588eef3cedbd157 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS18250 4c073bda01091d72c588eef3cedbd157 257 Gene3D G3DSA:3.40.50.720 10 256 1.3E-79 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18250 4c073bda01091d72c588eef3cedbd157 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 3.4E-11 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS18250 4c073bda01091d72c588eef3cedbd157 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 3.4E-11 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS18250 4c073bda01091d72c588eef3cedbd157 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 3.4E-11 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS18250 4c073bda01091d72c588eef3cedbd157 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 254 4.2E-59 T 09-03-2017 NA29_RS18250 4c073bda01091d72c588eef3cedbd157 257 SUPERFAMILY SSF51735 12 256 2.44E-76 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18250 4c073bda01091d72c588eef3cedbd157 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 195 0.0031 T 09-03-2017 NA29_RS09440 70ffc6906e1d2be82a4d222c23e019c6 329 SUPERFAMILY SSF55073 171 328 9.42E-50 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS09440 70ffc6906e1d2be82a4d222c23e019c6 329 Pfam PF00990 Diguanylate cyclase, GGDEF domain 166 325 1.2E-46 T 09-03-2017 IPR000160 GGDEF domain NA29_RS09440 70ffc6906e1d2be82a4d222c23e019c6 329 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 164 328 5.5E-53 T 09-03-2017 IPR000160 GGDEF domain NA29_RS09440 70ffc6906e1d2be82a4d222c23e019c6 329 SMART SM00065 21 163 1.9E-10 T 09-03-2017 IPR003018 GAF domain GO:0005515 NA29_RS09440 70ffc6906e1d2be82a4d222c23e019c6 329 Gene3D G3DSA:3.30.450.40 20 156 2.4E-13 T 09-03-2017 IPR029016 GAF domain-like NA29_RS09440 70ffc6906e1d2be82a4d222c23e019c6 329 SMART SM00267 155 329 7.3E-63 T 09-03-2017 IPR000160 GGDEF domain NA29_RS09440 70ffc6906e1d2be82a4d222c23e019c6 329 Gene3D G3DSA:3.30.70.270 168 328 6.7E-54 T 09-03-2017 NA29_RS09440 70ffc6906e1d2be82a4d222c23e019c6 329 Pfam PF01590 GAF domain 23 149 3.4E-11 T 09-03-2017 IPR003018 GAF domain GO:0005515 NA29_RS09440 70ffc6906e1d2be82a4d222c23e019c6 329 SUPERFAMILY SSF55781 23 158 2.63E-27 T 09-03-2017 IPR029016 GAF domain-like NA29_RS18460 19a249c575bfb97e39a2ca5174f5ba3d 110 SMART SM00418 10 88 3.4E-17 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS18460 19a249c575bfb97e39a2ca5174f5ba3d 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 2.3E-11 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS18460 19a249c575bfb97e39a2ca5174f5ba3d 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 2.3E-11 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS18460 19a249c575bfb97e39a2ca5174f5ba3d 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 2.3E-11 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS18460 19a249c575bfb97e39a2ca5174f5ba3d 110 Gene3D G3DSA:1.10.10.10 6 108 4.1E-30 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18460 19a249c575bfb97e39a2ca5174f5ba3d 110 Pfam PF12840 Helix-turn-helix domain 9 68 4.6E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18460 19a249c575bfb97e39a2ca5174f5ba3d 110 SUPERFAMILY SSF46785 5 100 1.73E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04835 798982ca943bb7283d91413a51012931 325 Gene3D G3DSA:1.20.1640.10 101 301 3.0E-27 T 09-03-2017 NA29_RS04835 798982ca943bb7283d91413a51012931 325 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 103 285 1.4E-48 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NA29_RS04835 798982ca943bb7283d91413a51012931 325 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 288 3.3E-72 T 09-03-2017 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 NA29_RS04835 798982ca943bb7283d91413a51012931 325 Pfam PF02355 Protein export membrane protein 113 296 8.3E-63 T 09-03-2017 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial NA29_RS04835 798982ca943bb7283d91413a51012931 325 SUPERFAMILY SSF82866 72 299 9.94E-39 T 09-03-2017 NA29_RS04835 798982ca943bb7283d91413a51012931 325 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 1.4E-26 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NA29_RS04835 798982ca943bb7283d91413a51012931 325 PRINTS PR01755 Bacterial translocase SecF protein signature 236 251 1.4E-26 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NA29_RS04835 798982ca943bb7283d91413a51012931 325 PRINTS PR01755 Bacterial translocase SecF protein signature 156 170 1.4E-26 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NA29_RS04835 798982ca943bb7283d91413a51012931 325 PRINTS PR01755 Bacterial translocase SecF protein signature 204 222 1.4E-26 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NA29_RS04835 798982ca943bb7283d91413a51012931 325 Pfam PF07549 SecD/SecF GG Motif 32 59 2.8E-8 T 09-03-2017 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site NA29_RS04835 798982ca943bb7283d91413a51012931 325 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 299 28.766 T 09-03-2017 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 NA29_RS00555 42769e32a1a0389509c9be3dd496b6b1 420 Pfam PF07687 Peptidase dimerisation domain 221 320 4.5E-7 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS00555 42769e32a1a0389509c9be3dd496b6b1 420 SUPERFAMILY SSF55031 221 335 1.38E-30 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS00555 42769e32a1a0389509c9be3dd496b6b1 420 PIRSF PIRSF001235 10 420 7.6E-141 T 09-03-2017 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 NA29_RS00555 42769e32a1a0389509c9be3dd496b6b1 420 SUPERFAMILY SSF53187 343 415 3.83E-97 T 09-03-2017 NA29_RS00555 42769e32a1a0389509c9be3dd496b6b1 420 SUPERFAMILY SSF53187 7 231 3.83E-97 T 09-03-2017 NA29_RS00555 42769e32a1a0389509c9be3dd496b6b1 420 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 17 414 1.2E-134 T 09-03-2017 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 NA29_RS00555 42769e32a1a0389509c9be3dd496b6b1 420 Pfam PF01546 Peptidase family M20/M25/M40 86 413 1.1E-36 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NA29_RS00555 42769e32a1a0389509c9be3dd496b6b1 420 Gene3D G3DSA:3.40.630.10 358 416 2.4E-119 T 09-03-2017 NA29_RS00555 42769e32a1a0389509c9be3dd496b6b1 420 Gene3D G3DSA:3.40.630.10 10 233 2.4E-119 T 09-03-2017 NA29_RS00555 42769e32a1a0389509c9be3dd496b6b1 420 Gene3D G3DSA:3.30.70.360 234 335 1.8E-39 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS12160 cbe1eb10e75319913b55588d4bfd2669 334 SUPERFAMILY SSF53474 46 329 4.09E-50 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS12160 cbe1eb10e75319913b55588d4bfd2669 334 Pfam PF07859 alpha/beta hydrolase fold 108 306 2.0E-46 T 09-03-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NA29_RS12160 cbe1eb10e75319913b55588d4bfd2669 334 Gene3D G3DSA:3.40.50.1820 59 328 1.9E-55 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS14835 5670d4b2dc41fb7b28257872ba597c42 234 SUPERFAMILY SSF54292 3 103 2.01E-28 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS14835 5670d4b2dc41fb7b28257872ba597c42 234 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS14835 5670d4b2dc41fb7b28257872ba597c42 234 Pfam PF13534 4Fe-4S dicluster domain 144 217 2.6E-9 T 09-03-2017 NA29_RS14835 5670d4b2dc41fb7b28257872ba597c42 234 Gene3D G3DSA:1.10.1060.10 104 232 4.1E-47 T 09-03-2017 NA29_RS14835 5670d4b2dc41fb7b28257872ba597c42 234 Gene3D G3DSA:3.10.20.30 2 103 1.3E-37 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS14835 5670d4b2dc41fb7b28257872ba597c42 234 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 226 1.7E-85 T 09-03-2017 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS14835 5670d4b2dc41fb7b28257872ba597c42 234 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 6 109 7.8E-33 T 09-03-2017 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS14835 5670d4b2dc41fb7b28257872ba597c42 234 SUPERFAMILY SSF46548 104 231 5.06E-39 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 NA29_RS01985 2a630885621c58d081629d5fe540b248 267 Gene3D G3DSA:2.60.120.10 18 90 6.1E-11 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS01985 2a630885621c58d081629d5fe540b248 267 SMART SM00342 172 254 1.2E-18 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS01985 2a630885621c58d081629d5fe540b248 267 SUPERFAMILY SSF46689 209 258 1.03E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS01985 2a630885621c58d081629d5fe540b248 267 Pfam PF02311 AraC-like ligand binding domain 31 101 1.8E-6 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS01985 2a630885621c58d081629d5fe540b248 267 Gene3D G3DSA:1.10.10.60 209 256 4.8E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS01985 2a630885621c58d081629d5fe540b248 267 Pfam PF12833 Helix-turn-helix domain 178 256 1.3E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS01985 2a630885621c58d081629d5fe540b248 267 Gene3D G3DSA:1.10.10.60 152 208 7.5E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS01985 2a630885621c58d081629d5fe540b248 267 SUPERFAMILY SSF51182 4 181 1.25E-13 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS22910 ba89b3cceb12aba75db1591b889df549 486 SUPERFAMILY SSF103473 44 482 1.44E-53 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS22910 ba89b3cceb12aba75db1591b889df549 486 ProSitePatterns PS00217 Sugar transport proteins signature 2. 144 169 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS22910 ba89b3cceb12aba75db1591b889df549 486 Pfam PF00083 Sugar (and other) transporter 49 466 1.6E-32 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS22910 ba89b3cceb12aba75db1591b889df549 486 Gene3D G3DSA:1.20.1250.20 290 475 5.8E-7 T 09-03-2017 NA29_RS22910 ba89b3cceb12aba75db1591b889df549 486 Gene3D G3DSA:1.20.1250.20 47 232 6.9E-19 T 09-03-2017 NA29_RS03660 99818ee0743bb9e13a3eb69a94b83919 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 160 2.1E-14 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS03660 99818ee0743bb9e13a3eb69a94b83919 687 SUPERFAMILY SSF56935 24 687 2.44E-83 T 09-03-2017 NA29_RS03660 99818ee0743bb9e13a3eb69a94b83919 687 Gene3D G3DSA:2.170.130.10 20 161 1.2E-22 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS03660 99818ee0743bb9e13a3eb69a94b83919 687 Gene3D G3DSA:2.40.170.20 162 687 1.5E-68 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS03660 99818ee0743bb9e13a3eb69a94b83919 687 Pfam PF00593 TonB dependent receptor 433 685 2.0E-22 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS08985 9e811f69835beb4d67beb23bf9b9032e 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.3E-29 T 09-03-2017 IPR000390 Small multidrug resistance protein family GO:0016021 NA29_RS08985 9e811f69835beb4d67beb23bf9b9032e 105 SUPERFAMILY SSF103481 5 102 9.81E-18 T 09-03-2017 NA29_RS02620 e8aed455325e3bca79ab6e9add82f478 217 SUPERFAMILY SSF52833 1 88 8.63E-24 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS02620 e8aed455325e3bca79ab6e9add82f478 217 Gene3D G3DSA:1.20.1050.10 99 217 4.6E-56 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS02620 e8aed455325e3bca79ab6e9add82f478 217 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 5 216 4.2E-90 T 09-03-2017 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 NA29_RS02620 e8aed455325e3bca79ab6e9add82f478 217 Gene3D G3DSA:3.40.30.10 2 98 4.2E-28 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS02620 e8aed455325e3bca79ab6e9add82f478 217 Pfam PF13410 Glutathione S-transferase, C-terminal domain 139 200 1.2E-7 T 09-03-2017 NA29_RS02620 e8aed455325e3bca79ab6e9add82f478 217 SUPERFAMILY SSF47616 86 216 3.41E-34 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS02620 e8aed455325e3bca79ab6e9add82f478 217 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 84 6.6E-15 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS23595 b6d616b7f9352491a7078bce5ccd699f 310 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 21 273 2.8E-78 T 09-03-2017 IPR013658 SMP-30/Gluconolactonase/LRE-like region NA29_RS23595 b6d616b7f9352491a7078bce5ccd699f 310 SUPERFAMILY SSF63829 17 300 9.81E-65 T 09-03-2017 NA29_RS23595 b6d616b7f9352491a7078bce5ccd699f 310 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 255 273 9.2E-26 T 09-03-2017 IPR005511 Senescence marker protein-30 (SMP-30) NA29_RS23595 b6d616b7f9352491a7078bce5ccd699f 310 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 104 125 9.2E-26 T 09-03-2017 IPR005511 Senescence marker protein-30 (SMP-30) NA29_RS23595 b6d616b7f9352491a7078bce5ccd699f 310 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 148 170 9.2E-26 T 09-03-2017 IPR005511 Senescence marker protein-30 (SMP-30) NA29_RS23595 b6d616b7f9352491a7078bce5ccd699f 310 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 213 230 9.2E-26 T 09-03-2017 IPR005511 Senescence marker protein-30 (SMP-30) NA29_RS23595 b6d616b7f9352491a7078bce5ccd699f 310 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 22 39 9.2E-26 T 09-03-2017 IPR005511 Senescence marker protein-30 (SMP-30) NA29_RS23595 b6d616b7f9352491a7078bce5ccd699f 310 Gene3D G3DSA:2.120.10.30 16 301 1.3E-85 T 09-03-2017 IPR011042 Six-bladed beta-propeller, TolB-like NA29_RS05490 681aeec1489e702e2410a2a86c7d0ac7 96 SUPERFAMILY SSF50129 1 94 3.58E-34 T 09-03-2017 IPR011032 GroES-like NA29_RS05490 681aeec1489e702e2410a2a86c7d0ac7 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 09-03-2017 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 NA29_RS05490 681aeec1489e702e2410a2a86c7d0ac7 96 PRINTS PR00297 10kDa chaperonin signature 60 72 6.0E-33 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NA29_RS05490 681aeec1489e702e2410a2a86c7d0ac7 96 PRINTS PR00297 10kDa chaperonin signature 3 18 6.0E-33 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NA29_RS05490 681aeec1489e702e2410a2a86c7d0ac7 96 PRINTS PR00297 10kDa chaperonin signature 81 94 6.0E-33 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NA29_RS05490 681aeec1489e702e2410a2a86c7d0ac7 96 PRINTS PR00297 10kDa chaperonin signature 25 46 6.0E-33 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NA29_RS05490 681aeec1489e702e2410a2a86c7d0ac7 96 Gene3D G3DSA:2.30.33.40 1 94 4.0E-39 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NA29_RS05490 681aeec1489e702e2410a2a86c7d0ac7 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 6.6E-35 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NA29_RS05490 681aeec1489e702e2410a2a86c7d0ac7 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.482 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NA29_RS05490 681aeec1489e702e2410a2a86c7d0ac7 96 SMART SM00883 2 94 2.4E-56 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 NA29_RS23830 b8094690eeac09042039239b00c787f3 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 7.7E-20 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23830 b8094690eeac09042039239b00c787f3 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.356 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23830 b8094690eeac09042039239b00c787f3 64 Gene3D G3DSA:1.10.287.310 1 60 1.6E-25 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23830 b8094690eeac09042039239b00c787f3 64 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 09-03-2017 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23830 b8094690eeac09042039239b00c787f3 64 SUPERFAMILY SSF46561 1 61 6.67E-20 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23830 b8094690eeac09042039239b00c787f3 64 Pfam PF00831 Ribosomal L29 protein 4 60 3.6E-22 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS03825 959e1c6117306023c2cddad83ca78a4b 468 PIRSF PIRSF000337 3 444 3.7E-145 T 09-03-2017 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 NA29_RS03825 959e1c6117306023c2cddad83ca78a4b 468 SUPERFAMILY SSF51679 6 436 3.53E-122 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS03825 959e1c6117306023c2cddad83ca78a4b 468 Gene3D G3DSA:3.20.20.30 351 436 6.4E-129 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS03825 959e1c6117306023c2cddad83ca78a4b 468 Gene3D G3DSA:3.20.20.30 3 308 6.4E-129 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS03825 959e1c6117306023c2cddad83ca78a4b 468 Pfam PF00296 Luciferase-like monooxygenase 24 388 8.5E-59 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS03825 959e1c6117306023c2cddad83ca78a4b 468 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 10 432 1.1E-155 T 09-03-2017 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 NA29_RS01705 89a736ea8efdb388b6a37cbe62249d60 299 Pfam PF03466 LysR substrate binding domain 88 291 2.3E-43 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS01705 89a736ea8efdb388b6a37cbe62249d60 299 Gene3D G3DSA:3.40.190.10 178 257 2.9E-7 T 09-03-2017 NA29_RS01705 89a736ea8efdb388b6a37cbe62249d60 299 SUPERFAMILY SSF46785 3 111 8.26E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01705 89a736ea8efdb388b6a37cbe62249d60 299 SUPERFAMILY SSF53850 90 294 1.38E-44 T 09-03-2017 NA29_RS01705 89a736ea8efdb388b6a37cbe62249d60 299 Gene3D G3DSA:1.10.10.10 3 86 6.1E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01705 89a736ea8efdb388b6a37cbe62249d60 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.3E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01705 89a736ea8efdb388b6a37cbe62249d60 299 Gene3D G3DSA:3.40.190.10 92 177 7.0E-20 T 09-03-2017 NA29_RS20815 c90bb809d578069cd27c9e768b99e9f1 221 SUPERFAMILY SSF47616 85 214 2.23E-23 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS20815 c90bb809d578069cd27c9e768b99e9f1 221 Gene3D G3DSA:1.20.1050.10 96 204 1.2E-23 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS20815 c90bb809d578069cd27c9e768b99e9f1 221 Pfam PF14497 Glutathione S-transferase, C-terminal domain 136 213 5.2E-6 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal NA29_RS20815 c90bb809d578069cd27c9e768b99e9f1 221 SUPERFAMILY SSF52833 4 85 1.39E-23 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS20815 c90bb809d578069cd27c9e768b99e9f1 221 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 75 9.2E-15 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS20815 c90bb809d578069cd27c9e768b99e9f1 221 Gene3D G3DSA:3.40.30.10 5 95 9.9E-27 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS03130 e9efeea65a6302995af1077628e03797 379 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 193 356 4.8E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS03130 e9efeea65a6302995af1077628e03797 379 Gene3D G3DSA:1.10.3720.10 162 369 1.7E-34 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS03130 e9efeea65a6302995af1077628e03797 379 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 162 266 5.6E-16 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NA29_RS03130 e9efeea65a6302995af1077628e03797 379 SUPERFAMILY SSF161098 163 363 1.7E-33 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS00710 a831dbed36277964c1c837cb89ee809d 167 Pfam PF01327 Polypeptide deformylase 5 153 1.9E-51 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS00710 a831dbed36277964c1c837cb89ee809d 167 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 1.9E-58 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS00710 a831dbed36277964c1c837cb89ee809d 167 SUPERFAMILY SSF56420 3 163 2.22E-62 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS00710 a831dbed36277964c1c837cb89ee809d 167 PRINTS PR01576 Peptide deformylase signature 121 150 1.0E-36 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS00710 a831dbed36277964c1c837cb89ee809d 167 PRINTS PR01576 Peptide deformylase signature 33 62 1.0E-36 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS00710 a831dbed36277964c1c837cb89ee809d 167 PRINTS PR01576 Peptide deformylase signature 90 101 1.0E-36 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS00710 a831dbed36277964c1c837cb89ee809d 167 PRINTS PR01576 Peptide deformylase signature 102 120 1.0E-36 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS00710 a831dbed36277964c1c837cb89ee809d 167 PIRSF PIRSF004749 1 167 1.2E-57 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS00710 a831dbed36277964c1c837cb89ee809d 167 Hamap MF_00163 Peptide deformylase [def]. 2 163 30.969 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS00710 a831dbed36277964c1c837cb89ee809d 167 Gene3D G3DSA:3.90.45.10 5 165 8.8E-68 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS11500 27db981ca334faf6642b07b95bc2fa3c 296 SUPERFAMILY SSF53850 91 292 1.24E-38 T 09-03-2017 NA29_RS11500 27db981ca334faf6642b07b95bc2fa3c 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 64 2.0E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11500 27db981ca334faf6642b07b95bc2fa3c 296 Gene3D G3DSA:3.40.190.10 178 263 8.9E-19 T 09-03-2017 NA29_RS11500 27db981ca334faf6642b07b95bc2fa3c 296 Gene3D G3DSA:1.10.10.10 4 88 8.0E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11500 27db981ca334faf6642b07b95bc2fa3c 296 Gene3D G3DSA:3.40.190.10 92 177 9.7E-19 T 09-03-2017 NA29_RS11500 27db981ca334faf6642b07b95bc2fa3c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.5E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11500 27db981ca334faf6642b07b95bc2fa3c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.5E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11500 27db981ca334faf6642b07b95bc2fa3c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.5E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11500 27db981ca334faf6642b07b95bc2fa3c 296 SUPERFAMILY SSF46785 7 112 3.68E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11500 27db981ca334faf6642b07b95bc2fa3c 296 Pfam PF03466 LysR substrate binding domain 89 291 3.6E-39 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS13150 08411c2eef90fdc3842884fa8f34e590 148 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 09-03-2017 IPR020081 SsrA-binding protein, conserved site NA29_RS13150 08411c2eef90fdc3842884fa8f34e590 148 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 144 3.7E-54 T 09-03-2017 IPR000037 SsrA-binding protein GO:0003723 NA29_RS13150 08411c2eef90fdc3842884fa8f34e590 148 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 1.0E-60 T 09-03-2017 IPR000037 SsrA-binding protein GO:0003723 NA29_RS13150 08411c2eef90fdc3842884fa8f34e590 148 Gene3D G3DSA:2.40.280.10 3 122 5.1E-49 T 09-03-2017 IPR023620 Small protein B NA29_RS13150 08411c2eef90fdc3842884fa8f34e590 148 Hamap MF_00023 SsrA-binding protein [smpB]. 1 148 73.463 T 09-03-2017 IPR000037 SsrA-binding protein GO:0003723 NA29_RS13150 08411c2eef90fdc3842884fa8f34e590 148 Pfam PF01668 SmpB protein 3 65 2.3E-29 T 09-03-2017 IPR000037 SsrA-binding protein GO:0003723 NA29_RS13150 08411c2eef90fdc3842884fa8f34e590 148 SUPERFAMILY SSF74982 3 127 3.79E-50 T 09-03-2017 IPR023620 Small protein B NA29_RS02490 0c11f463c7f9a7338d425f46cfc10c05 461 SMART SM00788 1 444 4.8E-92 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 NA29_RS02490 0c11f463c7f9a7338d425f46cfc10c05 461 Pfam PF00709 Adenylosuccinate synthetase 1 442 1.5E-102 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 NA29_RS02490 0c11f463c7f9a7338d425f46cfc10c05 461 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 461 82.553 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 NA29_RS02490 0c11f463c7f9a7338d425f46cfc10c05 461 Gene3D G3DSA:3.40.440.10 2 85 2.5E-43 T 09-03-2017 NA29_RS02490 0c11f463c7f9a7338d425f46cfc10c05 461 Gene3D G3DSA:3.40.440.10 183 258 2.5E-43 T 09-03-2017 NA29_RS02490 0c11f463c7f9a7338d425f46cfc10c05 461 Gene3D G3DSA:1.10.300.10 94 148 1.2E-10 T 09-03-2017 NA29_RS02490 0c11f463c7f9a7338d425f46cfc10c05 461 Gene3D G3DSA:3.90.170.10 259 277 2.0E-22 T 09-03-2017 NA29_RS02490 0c11f463c7f9a7338d425f46cfc10c05 461 Gene3D G3DSA:3.90.170.10 314 444 2.0E-22 T 09-03-2017 NA29_RS02490 0c11f463c7f9a7338d425f46cfc10c05 461 SUPERFAMILY SSF52540 1 282 3.4E-90 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02490 0c11f463c7f9a7338d425f46cfc10c05 461 SUPERFAMILY SSF52540 319 445 3.4E-90 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS21515 e09f6799d28a04968330b54c7a230898 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 3.4E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS21515 e09f6799d28a04968330b54c7a230898 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 3.4E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS21515 e09f6799d28a04968330b54c7a230898 193 SUPERFAMILY SSF46689 4 85 3.79E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS21515 e09f6799d28a04968330b54c7a230898 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.5E-10 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS21515 e09f6799d28a04968330b54c7a230898 193 SUPERFAMILY SSF48498 79 192 1.19E-21 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS21515 e09f6799d28a04968330b54c7a230898 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 55 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NA29_RS21515 e09f6799d28a04968330b54c7a230898 193 Gene3D G3DSA:1.10.357.10 74 193 2.4E-15 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS21515 e09f6799d28a04968330b54c7a230898 193 Gene3D G3DSA:1.10.10.60 2 63 1.6E-19 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS13235 09a491f58210728d3d4c43a897d07d35 186 Gene3D G3DSA:1.10.132.20 68 186 8.5E-45 T 09-03-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 NA29_RS13235 09a491f58210728d3d4c43a897d07d35 186 Pfam PF01765 Ribosome recycling factor 21 184 5.2E-62 T 09-03-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 NA29_RS13235 09a491f58210728d3d4c43a897d07d35 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 12 186 4.2E-67 T 09-03-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 NA29_RS13235 09a491f58210728d3d4c43a897d07d35 186 SUPERFAMILY SSF55194 5 185 1.26E-70 T 09-03-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 NA29_RS13235 09a491f58210728d3d4c43a897d07d35 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 26.799 T 09-03-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 NA29_RS17665 2783804fbb769c4a0748367402e0fe69 326 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 317 97.764 T 09-03-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 NA29_RS17665 2783804fbb769c4a0748367402e0fe69 326 Pfam PF03186 CobD/Cbib protein 15 296 5.0E-90 T 09-03-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 NA29_RS17665 2783804fbb769c4a0748367402e0fe69 326 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 16 294 1.2E-52 T 09-03-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 NA29_RS09105 95a24a1b20fc917ed8b176ee157aacd7 162 Gene3D G3DSA:3.10.350.10 109 160 2.3E-11 T 09-03-2017 IPR018392 LysM domain NA29_RS09105 95a24a1b20fc917ed8b176ee157aacd7 162 SUPERFAMILY SSF54106 109 160 5.49E-8 T 09-03-2017 IPR018392 LysM domain NA29_RS09105 95a24a1b20fc917ed8b176ee157aacd7 162 Pfam PF04972 BON domain 47 103 1.1E-6 T 09-03-2017 IPR007055 BON domain NA29_RS09105 95a24a1b20fc917ed8b176ee157aacd7 162 Pfam PF01476 LysM domain 112 160 7.6E-11 T 09-03-2017 IPR018392 LysM domain NA29_RS09105 95a24a1b20fc917ed8b176ee157aacd7 162 SMART SM00257 111 160 2.2E-13 T 09-03-2017 IPR018392 LysM domain NA29_RS13275 660799dfb2da43714500f83fdd33617f 177 Hamap MF_00163 Peptide deformylase [def]. 1 166 26.64 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS13275 660799dfb2da43714500f83fdd33617f 177 Gene3D G3DSA:3.90.45.10 1 163 1.5E-54 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS13275 660799dfb2da43714500f83fdd33617f 177 SUPERFAMILY SSF56420 1 164 3.66E-57 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS13275 660799dfb2da43714500f83fdd33617f 177 PRINTS PR01576 Peptide deformylase signature 109 127 9.0E-28 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS13275 660799dfb2da43714500f83fdd33617f 177 PRINTS PR01576 Peptide deformylase signature 97 108 9.0E-28 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS13275 660799dfb2da43714500f83fdd33617f 177 PRINTS PR01576 Peptide deformylase signature 128 157 9.0E-28 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS13275 660799dfb2da43714500f83fdd33617f 177 PRINTS PR01576 Peptide deformylase signature 33 62 9.0E-28 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS13275 660799dfb2da43714500f83fdd33617f 177 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 158 1.2E-35 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS13275 660799dfb2da43714500f83fdd33617f 177 PIRSF PIRSF004749 1 167 4.3E-48 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS13275 660799dfb2da43714500f83fdd33617f 177 Pfam PF01327 Polypeptide deformylase 3 157 1.3E-48 T 09-03-2017 IPR023635 Peptide deformylase NA29_RS18860 0d7054ef0c4bc5d7ccb3923c25562973 380 Gene3D G3DSA:2.40.160.10 28 380 8.0E-88 T 09-03-2017 IPR023614 Porin domain NA29_RS18860 0d7054ef0c4bc5d7ccb3923c25562973 380 SUPERFAMILY SSF56935 28 380 2.75E-81 T 09-03-2017 NA29_RS18860 0d7054ef0c4bc5d7ccb3923c25562973 380 PRINTS PR00184 Neisseria sp. porin signature 62 87 5.0E-5 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS18860 0d7054ef0c4bc5d7ccb3923c25562973 380 PRINTS PR00184 Neisseria sp. porin signature 320 344 5.0E-5 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS18860 0d7054ef0c4bc5d7ccb3923c25562973 380 Pfam PF13609 Gram-negative porin 14 346 1.2E-52 T 09-03-2017 NA29_RS14290 7b9693c4169d6194d99a59df5741bc28 327 Pfam PF00892 EamA-like transporter family 180 313 2.8E-12 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS14290 7b9693c4169d6194d99a59df5741bc28 327 Pfam PF00892 EamA-like transporter family 20 167 9.9E-15 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS14290 7b9693c4169d6194d99a59df5741bc28 327 SUPERFAMILY SSF103481 218 314 3.92E-13 T 09-03-2017 NA29_RS14290 7b9693c4169d6194d99a59df5741bc28 327 SUPERFAMILY SSF103481 45 69 5.49E-10 T 09-03-2017 NA29_RS14290 7b9693c4169d6194d99a59df5741bc28 327 SUPERFAMILY SSF103481 96 169 5.49E-10 T 09-03-2017 NA29_RS02640 8a1bd5b078d33f79eeafd876455a576a 473 SUPERFAMILY SSF63411 271 450 2.5E-44 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NA29_RS02640 8a1bd5b078d33f79eeafd876455a576a 473 Pfam PF05193 Peptidase M16 inactive domain 206 382 5.9E-35 T 09-03-2017 IPR007863 Peptidase M16, C-terminal NA29_RS02640 8a1bd5b078d33f79eeafd876455a576a 473 Gene3D G3DSA:3.30.830.10 272 448 3.2E-32 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 NA29_RS02640 8a1bd5b078d33f79eeafd876455a576a 473 Gene3D G3DSA:3.30.830.10 39 233 1.3E-33 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 NA29_RS02640 8a1bd5b078d33f79eeafd876455a576a 473 SUPERFAMILY SSF63411 34 244 2.17E-37 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 NA29_RS02640 8a1bd5b078d33f79eeafd876455a576a 473 Pfam PF00675 Insulinase (Peptidase family M16) 48 194 2.0E-6 T 09-03-2017 IPR011765 Peptidase M16, N-terminal NA29_RS24030 16f6249d7e076e2debd1589dcfac2523 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 09-03-2017 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS24030 16f6249d7e076e2debd1589dcfac2523 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 23 143 4.0E-4 T 09-03-2017 NA29_RS24030 16f6249d7e076e2debd1589dcfac2523 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 27.854 T 09-03-2017 IPR022973 Ribosomal protein L10 NA29_RS24030 16f6249d7e076e2debd1589dcfac2523 165 Pfam PF00466 Ribosomal protein L10 6 100 6.7E-23 T 09-03-2017 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 NA29_RS24030 16f6249d7e076e2debd1589dcfac2523 165 SUPERFAMILY SSF160369 4 159 2.48E-51 T 09-03-2017 NA29_RS16705 936236d8b1149f76080f34fa109a2a61 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 4.1E-46 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 NA29_RS16705 936236d8b1149f76080f34fa109a2a61 249 SUPERFAMILY SSF52402 1 242 3.42E-87 T 09-03-2017 NA29_RS16705 936236d8b1149f76080f34fa109a2a61 249 Gene3D G3DSA:3.40.50.620 1 247 4.4E-106 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS16705 936236d8b1149f76080f34fa109a2a61 249 PIRSF PIRSF000090 1 249 9.1E-86 T 09-03-2017 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105 NA29_RS16705 936236d8b1149f76080f34fa109a2a61 249 SMART SM00893 23 211 4.8E-69 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 NA29_RS16705 936236d8b1149f76080f34fa109a2a61 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 09-03-2017 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105 NA29_RS17745 936236d8b1149f76080f34fa109a2a61 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 4.1E-46 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 NA29_RS17745 936236d8b1149f76080f34fa109a2a61 249 SUPERFAMILY SSF52402 1 242 3.42E-87 T 09-03-2017 NA29_RS17745 936236d8b1149f76080f34fa109a2a61 249 Gene3D G3DSA:3.40.50.620 1 247 4.4E-106 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS17745 936236d8b1149f76080f34fa109a2a61 249 PIRSF PIRSF000090 1 249 9.1E-86 T 09-03-2017 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105 NA29_RS17745 936236d8b1149f76080f34fa109a2a61 249 SMART SM00893 23 211 4.8E-69 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 NA29_RS17745 936236d8b1149f76080f34fa109a2a61 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 09-03-2017 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105 NA29_RS21985 7cfbe12bd2258f5a04ebd4d2c091c0a9 452 Gene3D G3DSA:3.10.50.40 189 295 1.2E-26 T 09-03-2017 NA29_RS21985 7cfbe12bd2258f5a04ebd4d2c091c0a9 452 Gene3D G3DSA:3.10.50.40 300 426 4.7E-37 T 09-03-2017 NA29_RS21985 7cfbe12bd2258f5a04ebd4d2c091c0a9 452 SUPERFAMILY SSF54534 190 294 8.5E-24 T 09-03-2017 NA29_RS21985 7cfbe12bd2258f5a04ebd4d2c091c0a9 452 SUPERFAMILY SSF54534 304 405 8.5E-32 T 09-03-2017 NA29_RS21985 7cfbe12bd2258f5a04ebd4d2c091c0a9 452 Pfam PF09312 SurA N-terminal domain 41 158 2.5E-36 T 09-03-2017 IPR015391 SurA N-terminal NA29_RS21985 7cfbe12bd2258f5a04ebd4d2c091c0a9 452 SUPERFAMILY SSF109998 41 219 1.33E-42 T 09-03-2017 IPR027304 Trigger factor/SurA domain NA29_RS21985 7cfbe12bd2258f5a04ebd4d2c091c0a9 452 Pfam PF00639 PPIC-type PPIASE domain 310 400 3.8E-25 T 09-03-2017 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 NA29_RS21985 7cfbe12bd2258f5a04ebd4d2c091c0a9 452 Pfam PF00639 PPIC-type PPIASE domain 197 290 2.2E-16 T 09-03-2017 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 NA29_RS21985 7cfbe12bd2258f5a04ebd4d2c091c0a9 452 Hamap MF_01183 Chaperone SurA [surA]. 8 448 31.952 T 09-03-2017 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 NA29_RS11220 043e248daecce93fb5e1e1abae8b9761 423 Gene3D G3DSA:3.20.20.140 59 355 1.6E-95 T 09-03-2017 NA29_RS11220 043e248daecce93fb5e1e1abae8b9761 423 Gene3D G3DSA:2.30.40.10 356 382 1.1E-5 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS11220 043e248daecce93fb5e1e1abae8b9761 423 SUPERFAMILY SSF51338 1 53 2.02E-18 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS11220 043e248daecce93fb5e1e1abae8b9761 423 SUPERFAMILY SSF51338 367 405 2.02E-18 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS11220 043e248daecce93fb5e1e1abae8b9761 423 SUPERFAMILY SSF51556 53 376 4.33E-85 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS11220 043e248daecce93fb5e1e1abae8b9761 423 Pfam PF07969 Amidohydrolase family 83 405 7.8E-29 T 09-03-2017 IPR013108 Amidohydrolase 3 NA29_RS11220 043e248daecce93fb5e1e1abae8b9761 423 Gene3D G3DSA:2.30.40.10 4 58 1.2E-13 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS08565 47a40ea67d55e162c75dbb1de9bb4183 564 Pfam PF00005 ABC transporter 345 484 4.9E-24 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS08565 47a40ea67d55e162c75dbb1de9bb4183 564 Gene3D G3DSA:1.20.1560.10 5 301 3.9E-25 T 09-03-2017 NA29_RS08565 47a40ea67d55e162c75dbb1de9bb4183 564 SUPERFAMILY SSF52540 306 551 7.03E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08565 47a40ea67d55e162c75dbb1de9bb4183 564 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 3 539 4.2E-140 T 09-03-2017 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 NA29_RS08565 47a40ea67d55e162c75dbb1de9bb4183 564 SMART SM00382 351 533 4.6E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS08565 47a40ea67d55e162c75dbb1de9bb4183 564 Gene3D G3DSA:3.40.50.300 313 555 1.1E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08565 47a40ea67d55e162c75dbb1de9bb4183 564 SUPERFAMILY SSF90123 3 297 1.57E-30 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NA29_RS04485 1281714d70cb4ca45618434903f473ae 428 Gene3D G3DSA:3.40.192.10 50 191 2.8E-58 T 09-03-2017 NA29_RS04485 1281714d70cb4ca45618434903f473ae 428 SMART SM00839 195 425 2.5E-107 T 09-03-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 NA29_RS04485 1281714d70cb4ca45618434903f473ae 428 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 226 246 6.5E-33 T 09-03-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 NA29_RS04485 1281714d70cb4ca45618434903f473ae 428 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 353 364 6.5E-33 T 09-03-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 NA29_RS04485 1281714d70cb4ca45618434903f473ae 428 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 104 118 6.5E-33 T 09-03-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 NA29_RS04485 1281714d70cb4ca45618434903f473ae 428 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 184 206 6.5E-33 T 09-03-2017 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 NA29_RS04485 1281714d70cb4ca45618434903f473ae 428 Gene3D G3DSA:3.40.50.720 193 427 2.5E-85 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS04485 1281714d70cb4ca45618434903f473ae 428 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 47 175 9.4E-55 T 09-03-2017 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 NA29_RS04485 1281714d70cb4ca45618434903f473ae 428 SUPERFAMILY SSF51735 193 427 1.32E-79 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS04485 1281714d70cb4ca45618434903f473ae 428 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 193 425 7.6E-79 T 09-03-2017 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 NA29_RS04485 1281714d70cb4ca45618434903f473ae 428 SUPERFAMILY SSF53223 7 195 4.8E-68 T 09-03-2017 NA29_RS04485 1281714d70cb4ca45618434903f473ae 428 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 112 125 - T 09-03-2017 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-70614 NA29_RS04485 1281714d70cb4ca45618434903f473ae 428 PIRSF PIRSF000185 15 428 9.3E-167 T 09-03-2017 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 NA29_RS07820 bcd39402f3a76c800a1e6ab745780dd6 477 Gene3D G3DSA:3.90.700.10 267 392 6.4E-17 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS07820 bcd39402f3a76c800a1e6ab745780dd6 477 SUPERFAMILY SSF56425 266 402 8.02E-22 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS07820 bcd39402f3a76c800a1e6ab745780dd6 477 Gene3D G3DSA:3.50.50.60 398 460 7.2E-61 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07820 bcd39402f3a76c800a1e6ab745780dd6 477 Gene3D G3DSA:3.50.50.60 21 254 7.2E-61 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07820 bcd39402f3a76c800a1e6ab745780dd6 477 SUPERFAMILY SSF51905 1 264 2.79E-36 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07820 bcd39402f3a76c800a1e6ab745780dd6 477 SUPERFAMILY SSF51905 401 465 2.79E-36 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07820 bcd39402f3a76c800a1e6ab745780dd6 477 Pfam PF00890 FAD binding domain 24 434 4.7E-47 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS13740 3b6678cbed0d5f7e1e788b54faa54fd5 147 SUPERFAMILY SSF89919 10 114 4.97E-32 T 09-03-2017 IPR023799 Ribosome-binding factor A domain NA29_RS13740 3b6678cbed0d5f7e1e788b54faa54fd5 147 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 10 113 4.1E-25 T 09-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 NA29_RS13740 3b6678cbed0d5f7e1e788b54faa54fd5 147 Gene3D G3DSA:3.30.300.20 10 118 2.1E-36 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta NA29_RS13740 3b6678cbed0d5f7e1e788b54faa54fd5 147 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 14 98 2.0E-36 T 09-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 NA29_RS13740 3b6678cbed0d5f7e1e788b54faa54fd5 147 Pfam PF02033 Ribosome-binding factor A 10 111 1.2E-29 T 09-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 NA29_RS13740 3b6678cbed0d5f7e1e788b54faa54fd5 147 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 118 20.467 T 09-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 NA29_RS21535 9f408ba92ee25cc0295a37a862341463 222 SUPERFAMILY SSF103088 87 207 8.63E-28 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS21535 9f408ba92ee25cc0295a37a862341463 222 Gene3D G3DSA:3.30.1330.60 88 206 1.2E-30 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS21535 9f408ba92ee25cc0295a37a862341463 222 Pfam PF00691 OmpA family 98 202 4.4E-18 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 SUPERFAMILY SSF46689 446 524 3.94E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 SMART SM00448 2 113 9.9E-28 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 SMART SM00382 156 299 1.7E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 Gene3D G3DSA:1.10.8.60 309 387 1.3E-23 T 09-03-2017 NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 Gene3D G3DSA:3.40.50.2300 3 124 8.7E-30 T 09-03-2017 NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 SUPERFAMILY SSF52172 2 181 1.42E-37 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 487 504 4.2E-9 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 504 524 4.2E-9 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 SUPERFAMILY SSF52540 135 379 1.55E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 Pfam PF00072 Response regulator receiver domain 4 112 1.7E-23 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 09-03-2017 IPR025944 Sigma-54 interaction domain, conserved site NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 Gene3D G3DSA:3.40.50.300 133 308 1.6E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 Pfam PF02954 Bacterial regulatory protein, Fis family 482 521 1.9E-9 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 389 2.7E-186 T 09-03-2017 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 Pfam PF00158 Sigma-54 interaction domain 136 302 1.2E-68 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NA29_RS13985 76824c3bf850df46f2dbab44127eddd0 525 Gene3D G3DSA:1.10.10.60 455 524 1.0E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS17330 0c43bf1e3f2ba6143b0c8825586b437c 340 Gene3D G3DSA:3.40.830.10 1 26 1.4E-68 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS17330 0c43bf1e3f2ba6143b0c8825586b437c 340 Gene3D G3DSA:3.40.830.10 67 338 1.4E-68 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS17330 0c43bf1e3f2ba6143b0c8825586b437c 340 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 80 285 2.2E-13 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS17330 0c43bf1e3f2ba6143b0c8825586b437c 340 SUPERFAMILY SSF53213 67 338 3.79E-46 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS17330 0c43bf1e3f2ba6143b0c8825586b437c 340 SUPERFAMILY SSF53213 2 26 3.79E-46 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS08845 c1902b4e51884d3ffce84e4598c01084 210 SUPERFAMILY SSF52499 19 204 7.72E-52 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS08845 c1902b4e51884d3ffce84e4598c01084 210 Gene3D G3DSA:3.40.50.850 23 204 2.1E-50 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS08845 c1902b4e51884d3ffce84e4598c01084 210 Pfam PF00857 Isochorismatase family 24 196 3.7E-41 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS20245 529803708a3c332b18dc65fcb9b1298c 350 SUPERFAMILY SSF50331 236 350 9.7E-15 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS20245 529803708a3c332b18dc65fcb9b1298c 350 Gene3D G3DSA:3.40.50.300 3 237 5.1E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20245 529803708a3c332b18dc65fcb9b1298c 350 Pfam PF08402 TOBE domain 269 348 4.0E-14 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 NA29_RS20245 529803708a3c332b18dc65fcb9b1298c 350 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS20245 529803708a3c332b18dc65fcb9b1298c 350 SUPERFAMILY SSF52540 4 241 1.05E-89 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20245 529803708a3c332b18dc65fcb9b1298c 350 Pfam PF00005 ABC transporter 21 161 2.8E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS20245 529803708a3c332b18dc65fcb9b1298c 350 SMART SM00382 28 211 3.3E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS04345 e2f6b7ab42b387e023c104b00c4c0062 509 Gene3D G3DSA:3.40.1020.10 397 508 3.5E-46 T 09-03-2017 NA29_RS04345 e2f6b7ab42b387e023c104b00c4c0062 509 Gene3D G3DSA:3.40.1020.10 218 396 7.3E-50 T 09-03-2017 NA29_RS04345 e2f6b7ab42b387e023c104b00c4c0062 509 SUPERFAMILY SSF55021 415 508 1.74E-29 T 09-03-2017 NA29_RS04345 e2f6b7ab42b387e023c104b00c4c0062 509 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 7 508 3.8E-246 T 09-03-2017 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 NA29_RS04345 e2f6b7ab42b387e023c104b00c4c0062 509 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 312 1.7E-78 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS04345 e2f6b7ab42b387e023c104b00c4c0062 509 SUPERFAMILY SSF53686 7 361 9.04E-98 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS04345 e2f6b7ab42b387e023c104b00c4c0062 509 Gene3D G3DSA:3.40.50.1100 53 152 7.7E-35 T 09-03-2017 NA29_RS04345 e2f6b7ab42b387e023c104b00c4c0062 509 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 421 508 1.1E-24 T 09-03-2017 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 NA29_RS04345 e2f6b7ab42b387e023c104b00c4c0062 509 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 325 414 1.2E-25 T 09-03-2017 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 NA29_RS04345 e2f6b7ab42b387e023c104b00c4c0062 509 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 45 58 - T 09-03-2017 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 NA29_RS23820 f240441d9360768df46c3889911bce66 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.0E-56 T 09-03-2017 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 NA29_RS23820 f240441d9360768df46c3889911bce66 122 SMART SM01374 1 122 2.1E-83 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NA29_RS23820 f240441d9360768df46c3889911bce66 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 8.8E-54 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NA29_RS23820 f240441d9360768df46c3889911bce66 122 SUPERFAMILY SSF50193 1 122 3.92E-50 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NA29_RS23820 f240441d9360768df46c3889911bce66 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.294 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NA29_RS23820 f240441d9360768df46c3889911bce66 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 09-03-2017 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23820 f240441d9360768df46c3889911bce66 122 Gene3D G3DSA:2.40.150.20 1 122 3.6E-54 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 NA29_RS21460 41c6bc4dd665c85a2ca4d7eb4e592a01 204 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 31 121 8.8E-16 T 09-03-2017 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 NA29_RS21460 41c6bc4dd665c85a2ca4d7eb4e592a01 204 SUPERFAMILY SSF50475 23 166 1.32E-21 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS21460 41c6bc4dd665c85a2ca4d7eb4e592a01 204 Gene3D G3DSA:2.30.110.10 27 147 1.6E-25 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS21460 41c6bc4dd665c85a2ca4d7eb4e592a01 204 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 9 204 3.4E-82 T 09-03-2017 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent NA29_RS11980 1e606e43898d316ac2b3bdc87e4e76fa 155 Pfam PF00582 Universal stress protein family 1 144 4.3E-36 T 09-03-2017 IPR006016 UspA GO:0006950 NA29_RS11980 1e606e43898d316ac2b3bdc87e4e76fa 155 Gene3D G3DSA:3.40.50.620 1 146 8.6E-39 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS11980 1e606e43898d316ac2b3bdc87e4e76fa 155 PRINTS PR01438 Universal stress protein signature 2 20 5.2E-18 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS11980 1e606e43898d316ac2b3bdc87e4e76fa 155 PRINTS PR01438 Universal stress protein signature 122 144 5.2E-18 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS11980 1e606e43898d316ac2b3bdc87e4e76fa 155 PRINTS PR01438 Universal stress protein signature 104 116 5.2E-18 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS11980 1e606e43898d316ac2b3bdc87e4e76fa 155 SUPERFAMILY SSF52402 2 147 1.0E-36 T 09-03-2017 NA29_RS11980 1e606e43898d316ac2b3bdc87e4e76fa 155 PIRSF PIRSF006276 1 146 4.6E-19 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS03705 c318d38182ad2752ed19d1f28e3cf3a5 275 Gene3D G3DSA:3.40.50.1820 2 272 1.4E-71 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS03705 c318d38182ad2752ed19d1f28e3cf3a5 275 SUPERFAMILY SSF53474 3 273 6.61E-66 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS03705 c318d38182ad2752ed19d1f28e3cf3a5 275 Pfam PF00561 alpha/beta hydrolase fold 22 255 4.1E-29 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS03705 c318d38182ad2752ed19d1f28e3cf3a5 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 230 6.5E-13 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS03705 c318d38182ad2752ed19d1f28e3cf3a5 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 6.5E-13 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS03705 c318d38182ad2752ed19d1f28e3cf3a5 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 6.5E-13 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS03705 c318d38182ad2752ed19d1f28e3cf3a5 275 PRINTS PR00412 Epoxide hydrolase signature 27 45 7.4E-8 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS03705 c318d38182ad2752ed19d1f28e3cf3a5 275 PRINTS PR00412 Epoxide hydrolase signature 248 270 7.4E-8 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS03705 c318d38182ad2752ed19d1f28e3cf3a5 275 PRINTS PR00412 Epoxide hydrolase signature 47 62 7.4E-8 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS03705 c318d38182ad2752ed19d1f28e3cf3a5 275 PRINTS PR00412 Epoxide hydrolase signature 214 230 7.4E-8 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS08425 dba45acaa869b5d1e4819846fd4b2c4d 571 Gene3D G3DSA:3.40.50.300 298 569 6.5E-94 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08425 dba45acaa869b5d1e4819846fd4b2c4d 571 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 387 401 - T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 NA29_RS08425 dba45acaa869b5d1e4819846fd4b2c4d 571 Gene3D G3DSA:3.30.450.90 172 287 2.0E-40 T 09-03-2017 NA29_RS08425 dba45acaa869b5d1e4819846fd4b2c4d 571 Pfam PF00437 Type II/IV secretion system protein 189 458 1.0E-70 T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 NA29_RS08425 dba45acaa869b5d1e4819846fd4b2c4d 571 SUPERFAMILY SSF52540 176 568 2.06E-93 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08425 dba45acaa869b5d1e4819846fd4b2c4d 571 SUPERFAMILY SSF160246 12 140 1.05E-8 T 09-03-2017 NA29_RS08425 dba45acaa869b5d1e4819846fd4b2c4d 571 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 49 145 1.4E-7 T 09-03-2017 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 NA29_RS24230 72d5488f80d2b00928faf44ede2176c9 132 TIGRFAM TIGR00494 crcB: protein CrcB 7 119 1.0E-30 T 09-03-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 NA29_RS24230 72d5488f80d2b00928faf44ede2176c9 132 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 18.532 T 09-03-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 NA29_RS24230 72d5488f80d2b00928faf44ede2176c9 132 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 1.4E-21 T 09-03-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 NA29_RS14440 fd3efc7b384db87a64c17e04b3ccdbeb 258 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 48 257 2.4E-94 T 09-03-2017 IPR019288 Predicted 3'-5' exonuclease, PolB-like NA29_RS14440 fd3efc7b384db87a64c17e04b3ccdbeb 258 SUPERFAMILY SSF53098 4 229 7.09E-43 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS14440 fd3efc7b384db87a64c17e04b3ccdbeb 258 Gene3D G3DSA:3.30.420.10 5 216 2.4E-31 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS04125 a4384f5f5748c52ebedc04571aaa4bc3 271 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 2 256 36.337 T 09-03-2017 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 NA29_RS04125 a4384f5f5748c52ebedc04571aaa4bc3 271 Pfam PF00149 Calcineurin-like phosphoesterase 3 199 3.7E-16 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NA29_RS04125 a4384f5f5748c52ebedc04571aaa4bc3 271 SUPERFAMILY SSF56300 3 256 5.77E-51 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS04125 a4384f5f5748c52ebedc04571aaa4bc3 271 Gene3D G3DSA:3.60.21.10 3 251 1.2E-35 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS02795 83ae0d9c9e0ed22edbf1b3d8e69345a7 289 Gene3D G3DSA:3.40.50.300 4 240 3.2E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02795 83ae0d9c9e0ed22edbf1b3d8e69345a7 289 SMART SM00382 29 231 2.5E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS02795 83ae0d9c9e0ed22edbf1b3d8e69345a7 289 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 5 249 7.2E-86 T 09-03-2017 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 NA29_RS02795 83ae0d9c9e0ed22edbf1b3d8e69345a7 289 SUPERFAMILY SSF52540 4 241 9.37E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02795 83ae0d9c9e0ed22edbf1b3d8e69345a7 289 Pfam PF00005 ABC transporter 20 180 1.2E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS02795 83ae0d9c9e0ed22edbf1b3d8e69345a7 289 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS24640 4f0d3f9f24c9de2785ee2dc7f1f945f5 504 Pfam PF01235 Sodium:alanine symporter family 56 453 3.1E-145 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 NA29_RS24640 4f0d3f9f24c9de2785ee2dc7f1f945f5 504 PRINTS PR00175 Sodium/alanine symporter signature 180 198 8.8E-47 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 NA29_RS24640 4f0d3f9f24c9de2785ee2dc7f1f945f5 504 PRINTS PR00175 Sodium/alanine symporter signature 349 371 8.8E-47 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 NA29_RS24640 4f0d3f9f24c9de2785ee2dc7f1f945f5 504 PRINTS PR00175 Sodium/alanine symporter signature 208 227 8.8E-47 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 NA29_RS24640 4f0d3f9f24c9de2785ee2dc7f1f945f5 504 PRINTS PR00175 Sodium/alanine symporter signature 89 111 8.8E-47 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 NA29_RS24640 4f0d3f9f24c9de2785ee2dc7f1f945f5 504 PRINTS PR00175 Sodium/alanine symporter signature 303 321 8.8E-47 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 NA29_RS24640 4f0d3f9f24c9de2785ee2dc7f1f945f5 504 PRINTS PR00175 Sodium/alanine symporter signature 409 429 8.8E-47 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 NA29_RS24640 4f0d3f9f24c9de2785ee2dc7f1f945f5 504 TIGRFAM TIGR00835 agcS: amino acid carrier protein 21 439 4.4E-144 T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 NA29_RS24640 4f0d3f9f24c9de2785ee2dc7f1f945f5 504 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 89 104 - T 09-03-2017 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 NA29_RS13785 c03c446951ae3e8b8f073371acf11bd6 338 Gene3D G3DSA:3.40.50.720 160 247 2.8E-15 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13785 c03c446951ae3e8b8f073371acf11bd6 338 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 338 5.0E-147 T 09-03-2017 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 NA29_RS13785 c03c446951ae3e8b8f073371acf11bd6 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 91 5.9E-8 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NA29_RS13785 c03c446951ae3e8b8f073371acf11bd6 338 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 150 171 - T 09-03-2017 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 NA29_RS13785 c03c446951ae3e8b8f073371acf11bd6 338 SUPERFAMILY SSF51735 117 288 1.03E-35 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13785 c03c446951ae3e8b8f073371acf11bd6 338 SMART SM00829 16 335 3.1E-12 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NA29_RS13785 c03c446951ae3e8b8f073371acf11bd6 338 Gene3D G3DSA:3.90.180.10 1 159 6.6E-37 T 09-03-2017 IPR011032 GroES-like NA29_RS13785 c03c446951ae3e8b8f073371acf11bd6 338 Pfam PF13602 Zinc-binding dehydrogenase 194 335 1.3E-22 T 09-03-2017 NA29_RS13785 c03c446951ae3e8b8f073371acf11bd6 338 SUPERFAMILY SSF50129 8 155 1.42E-34 T 09-03-2017 IPR011032 GroES-like NA29_RS05135 1772d85051db5cd0518301d3912854bd 590 Pfam PF10102 Domain of unknown function (DUF2341) 72 137 2.7E-18 T 09-03-2017 IPR018765 Domain of unknown function DUF2341 NA29_RS05135 1772d85051db5cd0518301d3912854bd 590 Gene3D G3DSA:2.60.120.200 142 331 3.8E-17 T 09-03-2017 IPR013320 Concanavalin A-like lectin/glucanase domain NA29_RS05135 1772d85051db5cd0518301d3912854bd 590 SMART SM00560 200 326 7.2E-4 T 09-03-2017 IPR006558 LamG-like jellyroll fold NA29_RS05135 1772d85051db5cd0518301d3912854bd 590 Pfam PF01618 MotA/TolQ/ExbB proton channel family 453 563 9.1E-28 T 09-03-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 NA29_RS05135 1772d85051db5cd0518301d3912854bd 590 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 192 328 1.8E-21 T 09-03-2017 NA29_RS05135 1772d85051db5cd0518301d3912854bd 590 SUPERFAMILY SSF49899 186 350 2.14E-24 T 09-03-2017 IPR013320 Concanavalin A-like lectin/glucanase domain NA29_RS16115 5a05f4e9ed71f1f03b6f6a2851317468 609 Gene3D G3DSA:3.60.20.10 2 235 1.3E-74 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS16115 5a05f4e9ed71f1f03b6f6a2851317468 609 Pfam PF13522 Glutamine amidotransferase domain 65 186 1.2E-21 T 09-03-2017 NA29_RS16115 5a05f4e9ed71f1f03b6f6a2851317468 609 Gene3D G3DSA:3.40.50.10490 246 442 5.7E-71 T 09-03-2017 NA29_RS16115 5a05f4e9ed71f1f03b6f6a2851317468 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.3E-239 T 09-03-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 NA29_RS16115 5a05f4e9ed71f1f03b6f6a2851317468 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 38.245 T 09-03-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 NA29_RS16115 5a05f4e9ed71f1f03b6f6a2851317468 609 Pfam PF01380 SIS domain 293 415 7.5E-28 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 NA29_RS16115 5a05f4e9ed71f1f03b6f6a2851317468 609 Pfam PF01380 SIS domain 462 591 5.1E-23 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 NA29_RS16115 5a05f4e9ed71f1f03b6f6a2851317468 609 SUPERFAMILY SSF56235 2 233 8.58E-69 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS16115 5a05f4e9ed71f1f03b6f6a2851317468 609 Gene3D G3DSA:3.40.50.10490 443 609 5.0E-62 T 09-03-2017 NA29_RS16115 5a05f4e9ed71f1f03b6f6a2851317468 609 SUPERFAMILY SSF53697 247 609 9.18E-110 T 09-03-2017 NA29_RS08055 411e9e2dbd171d52f9133acbad033ee4 300 SUPERFAMILY SSF53850 88 295 3.43E-35 T 09-03-2017 NA29_RS08055 411e9e2dbd171d52f9133acbad033ee4 300 Gene3D G3DSA:1.10.10.10 1 85 1.4E-30 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08055 411e9e2dbd171d52f9133acbad033ee4 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.3E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08055 411e9e2dbd171d52f9133acbad033ee4 300 Pfam PF03466 LysR substrate binding domain 87 293 8.9E-41 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS08055 411e9e2dbd171d52f9133acbad033ee4 300 SUPERFAMILY SSF46785 1 86 8.29E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08055 411e9e2dbd171d52f9133acbad033ee4 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08055 411e9e2dbd171d52f9133acbad033ee4 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08055 411e9e2dbd171d52f9133acbad033ee4 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08055 411e9e2dbd171d52f9133acbad033ee4 300 Gene3D G3DSA:3.40.190.10 88 177 2.6E-25 T 09-03-2017 NA29_RS08055 411e9e2dbd171d52f9133acbad033ee4 300 Gene3D G3DSA:3.40.190.10 178 264 2.5E-32 T 09-03-2017 NA29_RS24270 b42e6b554e83b39764437a0c8ab4df68 435 Pfam PF00860 Permease family 30 400 5.5E-94 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 NA29_RS24270 b42e6b554e83b39764437a0c8ab4df68 435 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 347 367 - T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 NA29_RS24270 b42e6b554e83b39764437a0c8ab4df68 435 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 25 422 5.4E-110 T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 NA29_RS19235 b3b19ec2db29332c674e5db2f33b6c9d 488 Pfam PF02321 Outer membrane efflux protein 286 463 1.6E-16 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS19235 b3b19ec2db29332c674e5db2f33b6c9d 488 Pfam PF02321 Outer membrane efflux protein 65 255 7.1E-15 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS19235 b3b19ec2db29332c674e5db2f33b6c9d 488 SUPERFAMILY SSF56954 3 24 2.09E-85 T 09-03-2017 NA29_RS19235 b3b19ec2db29332c674e5db2f33b6c9d 488 SUPERFAMILY SSF56954 56 467 2.09E-85 T 09-03-2017 NA29_RS19235 b3b19ec2db29332c674e5db2f33b6c9d 488 Gene3D G3DSA:2.20.200.10 101 142 1.1E-8 T 09-03-2017 NA29_RS19235 b3b19ec2db29332c674e5db2f33b6c9d 488 Gene3D G3DSA:2.20.200.10 317 349 1.1E-8 T 09-03-2017 NA29_RS19235 b3b19ec2db29332c674e5db2f33b6c9d 488 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 5 465 4.1E-87 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NA29_RS19235 b3b19ec2db29332c674e5db2f33b6c9d 488 Gene3D G3DSA:1.20.1600.10 352 466 2.2E-80 T 09-03-2017 NA29_RS19235 b3b19ec2db29332c674e5db2f33b6c9d 488 Gene3D G3DSA:1.20.1600.10 53 91 2.2E-80 T 09-03-2017 NA29_RS19235 b3b19ec2db29332c674e5db2f33b6c9d 488 Gene3D G3DSA:1.20.1600.10 143 316 2.2E-80 T 09-03-2017 NA29_RS15135 c2a2e031566efb3a4bf937dbe62874ed 263 SMART SM00849 11 196 1.4E-6 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS15135 c2a2e031566efb3a4bf937dbe62874ed 263 SUPERFAMILY SSF56281 3 238 2.36E-39 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS15135 c2a2e031566efb3a4bf937dbe62874ed 263 Gene3D G3DSA:3.60.15.10 3 239 8.5E-32 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS15135 c2a2e031566efb3a4bf937dbe62874ed 263 Pfam PF12706 Beta-lactamase superfamily domain 26 223 1.8E-23 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS19945 46a687752c4ea5259591a2119f37b521 401 Gene3D G3DSA:3.40.50.10300 189 399 2.4E-79 T 09-03-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 NA29_RS19945 46a687752c4ea5259591a2119f37b521 401 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 369 3.6E-64 T 09-03-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 NA29_RS19945 46a687752c4ea5259591a2119f37b521 401 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 393 5.8E-129 T 09-03-2017 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5 NA29_RS19945 46a687752c4ea5259591a2119f37b521 401 SUPERFAMILY SSF52507 6 183 2.49E-61 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 NA29_RS19945 46a687752c4ea5259591a2119f37b521 401 SUPERFAMILY SSF102645 175 397 3.14E-70 T 09-03-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 NA29_RS19945 46a687752c4ea5259591a2119f37b521 401 Gene3D G3DSA:3.40.50.1950 6 188 1.1E-65 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 NA29_RS19945 46a687752c4ea5259591a2119f37b521 401 Pfam PF02441 Flavoprotein 10 137 3.6E-35 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 NA29_RS25190 233c943bb9633255344c0b521e5ab98c 259 Pfam PF00005 ABC transporter 24 179 7.3E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS25190 233c943bb9633255344c0b521e5ab98c 259 SUPERFAMILY SSF52540 6 249 9.52E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25190 233c943bb9633255344c0b521e5ab98c 259 Gene3D G3DSA:3.40.50.300 3 246 5.0E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25190 233c943bb9633255344c0b521e5ab98c 259 SMART SM00382 32 226 1.6E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS25190 233c943bb9633255344c0b521e5ab98c 259 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 248 9.4E-8 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS08050 34fffaaba856d5d0eee26027ad5aee80 498 Gene3D G3DSA:3.40.810.20 227 490 2.6E-78 T 09-03-2017 NA29_RS08050 34fffaaba856d5d0eee26027ad5aee80 498 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 12 494 2.5E-226 T 09-03-2017 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 NA29_RS08050 34fffaaba856d5d0eee26027ad5aee80 498 SUPERFAMILY SSF100950 3 222 3.27E-73 T 09-03-2017 NA29_RS08050 34fffaaba856d5d0eee26027ad5aee80 498 Gene3D G3DSA:3.40.1080.10 11 221 3.2E-42 T 09-03-2017 NA29_RS08050 34fffaaba856d5d0eee26027ad5aee80 498 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 321 463 2.6E-42 T 09-03-2017 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain NA29_RS08050 34fffaaba856d5d0eee26027ad5aee80 498 SUPERFAMILY SSF100950 227 494 1.64E-80 T 09-03-2017 NA29_RS08050 34fffaaba856d5d0eee26027ad5aee80 498 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 14 215 1.7E-29 T 09-03-2017 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 NA29_RS12755 f4e1662da983bf3e1bb9a124054c5dc3 770 Gene3D G3DSA:3.40.228.10 183 394 3.9E-54 T 09-03-2017 NA29_RS12755 f4e1662da983bf3e1bb9a124054c5dc3 770 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 13 767 9.8E-294 T 09-03-2017 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 NA29_RS12755 f4e1662da983bf3e1bb9a124054c5dc3 770 Gene3D G3DSA:2.40.40.20 654 766 6.8E-5 T 09-03-2017 NA29_RS12755 f4e1662da983bf3e1bb9a124054c5dc3 770 SUPERFAMILY SSF50692 651 768 3.59E-12 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain NA29_RS12755 f4e1662da983bf3e1bb9a124054c5dc3 770 Gene3D G3DSA:3.40.50.740 109 182 5.9E-52 T 09-03-2017 NA29_RS12755 f4e1662da983bf3e1bb9a124054c5dc3 770 Gene3D G3DSA:3.40.50.740 395 629 5.9E-52 T 09-03-2017 NA29_RS12755 f4e1662da983bf3e1bb9a124054c5dc3 770 Pfam PF01568 Molydopterin dinucleotide binding domain 654 762 1.9E-7 T 09-03-2017 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 NA29_RS12755 f4e1662da983bf3e1bb9a124054c5dc3 770 Pfam PF00384 Molybdopterin oxidoreductase 311 418 1.1E-7 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS12755 f4e1662da983bf3e1bb9a124054c5dc3 770 Pfam PF00384 Molybdopterin oxidoreductase 109 245 3.3E-10 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS12755 f4e1662da983bf3e1bb9a124054c5dc3 770 SUPERFAMILY SSF53706 48 634 2.88E-143 T 09-03-2017 NA29_RS12755 f4e1662da983bf3e1bb9a124054c5dc3 770 PIRSF PIRSF000144 1 769 0.0 T 09-03-2017 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 NA29_RS20845 e235dbd1dd59e6746348f0b8db54fd85 197 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 76 3.0E-17 T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NA29_RS20845 e235dbd1dd59e6746348f0b8db54fd85 197 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 190 2.2E-52 T 09-03-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 NA29_RS20845 e235dbd1dd59e6746348f0b8db54fd85 197 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NA29_RS20845 e235dbd1dd59e6746348f0b8db54fd85 197 PIRSF PIRSF000847 1 197 3.1E-46 T 09-03-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 NA29_RS03680 c2a84ab383b6dee88786babc73b337b7 303 Pfam PF03466 LysR substrate binding domain 87 290 4.1E-28 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS03680 c2a84ab383b6dee88786babc73b337b7 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03680 c2a84ab383b6dee88786babc73b337b7 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03680 c2a84ab383b6dee88786babc73b337b7 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03680 c2a84ab383b6dee88786babc73b337b7 303 SUPERFAMILY SSF46785 3 103 7.86E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03680 c2a84ab383b6dee88786babc73b337b7 303 Gene3D G3DSA:3.40.190.10 176 261 1.7E-12 T 09-03-2017 NA29_RS03680 c2a84ab383b6dee88786babc73b337b7 303 SUPERFAMILY SSF53850 88 290 4.52E-30 T 09-03-2017 NA29_RS03680 c2a84ab383b6dee88786babc73b337b7 303 Gene3D G3DSA:1.10.10.10 1 84 3.3E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03680 c2a84ab383b6dee88786babc73b337b7 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 9.3E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03680 c2a84ab383b6dee88786babc73b337b7 303 Gene3D G3DSA:3.40.190.10 90 175 1.3E-10 T 09-03-2017 NA29_RS01255 109b5335025fc45a091606049838cfaf 357 Pfam PF13609 Gram-negative porin 6 327 1.2E-49 T 09-03-2017 NA29_RS01255 109b5335025fc45a091606049838cfaf 357 ProSitePatterns PS00151 Acylphosphatase signature 2. 322 338 - T 09-03-2017 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NA29_RS01255 109b5335025fc45a091606049838cfaf 357 Gene3D G3DSA:2.40.160.10 19 357 2.5E-72 T 09-03-2017 IPR023614 Porin domain NA29_RS01255 109b5335025fc45a091606049838cfaf 357 SUPERFAMILY SSF56935 19 357 2.75E-67 T 09-03-2017 NA29_RS01255 109b5335025fc45a091606049838cfaf 357 PRINTS PR00184 Neisseria sp. porin signature 300 324 2.1E-10 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS01255 109b5335025fc45a091606049838cfaf 357 PRINTS PR00184 Neisseria sp. porin signature 197 214 2.1E-10 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS01255 109b5335025fc45a091606049838cfaf 357 PRINTS PR00184 Neisseria sp. porin signature 53 78 2.1E-10 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS06785 a402f66c10368264e2d3db3f19eaeead 779 SUPERFAMILY SSF56003 140 773 1.31E-198 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS06785 a402f66c10368264e2d3db3f19eaeead 779 Gene3D G3DSA:3.30.365.10 453 608 1.6E-52 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS06785 a402f66c10368264e2d3db3f19eaeead 779 SUPERFAMILY SSF54665 10 141 7.59E-43 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS06785 a402f66c10368264e2d3db3f19eaeead 779 Gene3D G3DSA:3.30.365.10 284 359 2.8E-23 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS06785 a402f66c10368264e2d3db3f19eaeead 779 Gene3D G3DSA:3.30.365.10 143 175 2.8E-23 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS06785 a402f66c10368264e2d3db3f19eaeead 779 Gene3D G3DSA:3.30.365.10 618 772 1.0E-79 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS06785 a402f66c10368264e2d3db3f19eaeead 779 Gene3D G3DSA:3.30.365.10 360 452 1.0E-79 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS06785 a402f66c10368264e2d3db3f19eaeead 779 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 19 774 0.0 T 09-03-2017 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 NA29_RS06785 a402f66c10368264e2d3db3f19eaeead 779 SMART SM01008 33 140 4.2E-49 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS06785 a402f66c10368264e2d3db3f19eaeead 779 Gene3D G3DSA:3.90.1170.50 19 140 1.7E-43 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS06785 a402f66c10368264e2d3db3f19eaeead 779 Gene3D G3DSA:3.30.365.10 176 282 5.4E-34 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS06785 a402f66c10368264e2d3db3f19eaeead 779 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 161 703 1.6E-195 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS06785 a402f66c10368264e2d3db3f19eaeead 779 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 34 140 2.5E-26 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS07200 fc18a4d87e78714e09db4caaa560e031 547 Pfam PF00501 AMP-binding enzyme 49 449 3.8E-72 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS07200 fc18a4d87e78714e09db4caaa560e031 547 Pfam PF13193 AMP-binding enzyme C-terminal domain 458 536 4.7E-26 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS07200 fc18a4d87e78714e09db4caaa560e031 547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 208 219 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS07200 fc18a4d87e78714e09db4caaa560e031 547 Gene3D G3DSA:2.30.38.10 372 439 5.5E-14 T 09-03-2017 NA29_RS07200 fc18a4d87e78714e09db4caaa560e031 547 Gene3D G3DSA:3.40.50.980 214 371 3.0E-32 T 09-03-2017 NA29_RS07200 fc18a4d87e78714e09db4caaa560e031 547 Gene3D G3DSA:3.40.50.980 42 213 7.6E-31 T 09-03-2017 NA29_RS07200 fc18a4d87e78714e09db4caaa560e031 547 Gene3D G3DSA:3.30.300.30 444 546 7.8E-32 T 09-03-2017 NA29_RS07200 fc18a4d87e78714e09db4caaa560e031 547 SUPERFAMILY SSF56801 28 546 6.67E-131 T 09-03-2017 NA29_RS21540 30cc2554ef031f436815bad990014ee2 264 Pfam PF11445 Protein of unknown function (DUF2894) 11 239 4.6E-61 T 09-03-2017 IPR021549 Protein of unknown function DUF2894 NA29_RS15220 29ece572910f4dae627f6af18c55982a 276 Pfam PF12697 Alpha/beta hydrolase family 8 257 4.1E-15 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS15220 29ece572910f4dae627f6af18c55982a 276 Gene3D G3DSA:3.40.50.1820 7 265 3.1E-30 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS15220 29ece572910f4dae627f6af18c55982a 276 SUPERFAMILY SSF53474 5 265 3.16E-31 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS00105 a3aa9092ecee38e7fdb8a8e2a24c95d2 628 SMART SM00304 295 349 1.4E-8 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS00105 a3aa9092ecee38e7fdb8a8e2a24c95d2 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 410 596 3.9E-60 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS00105 a3aa9092ecee38e7fdb8a8e2a24c95d2 628 Gene3D G3DSA:3.30.450.20 133 271 2.6E-21 T 09-03-2017 NA29_RS00105 a3aa9092ecee38e7fdb8a8e2a24c95d2 628 SUPERFAMILY SSF103190 108 161 2.47E-7 T 09-03-2017 IPR029151 Periplasmic sensor domain-like NA29_RS00105 a3aa9092ecee38e7fdb8a8e2a24c95d2 628 SUPERFAMILY SSF58104 317 598 8.37E-72 T 09-03-2017 NA29_RS00105 a3aa9092ecee38e7fdb8a8e2a24c95d2 628 Pfam PF02743 Cache domain 103 257 6.7E-20 T 09-03-2017 IPR033479 Double Cache domain 1 NA29_RS00105 a3aa9092ecee38e7fdb8a8e2a24c95d2 628 Gene3D G3DSA:1.10.287.950 368 569 3.8E-58 T 09-03-2017 NA29_RS00105 a3aa9092ecee38e7fdb8a8e2a24c95d2 628 SMART SM00283 350 597 1.0E-84 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS00105 a3aa9092ecee38e7fdb8a8e2a24c95d2 628 Pfam PF00672 HAMP domain 276 344 3.8E-10 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS17695 6af18067e6388615269e50d349e4d901 356 Gene3D G3DSA:3.40.50.10210 76 335 1.8E-107 T 09-03-2017 NA29_RS17695 6af18067e6388615269e50d349e4d901 356 SUPERFAMILY SSF52733 12 353 1.31E-117 T 09-03-2017 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 NA29_RS17695 6af18067e6388615269e50d349e4d901 356 Gene3D G3DSA:1.10.1610.10 11 75 5.4E-29 T 09-03-2017 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 NA29_RS17695 6af18067e6388615269e50d349e4d901 356 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 19 352 5.3E-135 T 09-03-2017 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 NA29_RS17695 6af18067e6388615269e50d349e4d901 356 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 16 354 35.752 T 09-03-2017 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 NA29_RS17695 6af18067e6388615269e50d349e4d901 356 Pfam PF02277 Phosphoribosyltransferase 16 352 8.9E-130 T 09-03-2017 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 NA29_RS24655 7e31363e5c58c64a81b2f2ae2773b580 975 Gene3D G3DSA:3.40.640.10 519 793 6.5E-38 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS24655 7e31363e5c58c64a81b2f2ae2773b580 975 Gene3D G3DSA:3.40.640.10 102 327 2.0E-12 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS24655 7e31363e5c58c64a81b2f2ae2773b580 975 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 17 974 25.693 T 09-03-2017 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 NA29_RS24655 7e31363e5c58c64a81b2f2ae2773b580 975 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 26 968 0.0 T 09-03-2017 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 NA29_RS24655 7e31363e5c58c64a81b2f2ae2773b580 975 Pfam PF02347 Glycine cleavage system P-protein 470 766 2.6E-10 T 09-03-2017 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 NA29_RS24655 7e31363e5c58c64a81b2f2ae2773b580 975 Pfam PF02347 Glycine cleavage system P-protein 26 453 4.4E-177 T 09-03-2017 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 NA29_RS24655 7e31363e5c58c64a81b2f2ae2773b580 975 SUPERFAMILY SSF53383 947 969 7.06E-98 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS24655 7e31363e5c58c64a81b2f2ae2773b580 975 SUPERFAMILY SSF53383 495 904 7.06E-98 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS24655 7e31363e5c58c64a81b2f2ae2773b580 975 SUPERFAMILY SSF53383 26 456 2.51E-97 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS16800 74f4510194f6a596a393f8c1d8150fdd 314 PIRSF PIRSF015689 3 314 2.0E-133 T 09-03-2017 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 NA29_RS16800 74f4510194f6a596a393f8c1d8150fdd 314 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 314 144.551 T 09-03-2017 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 NA29_RS16800 74f4510194f6a596a393f8c1d8150fdd 314 Gene3D G3DSA:3.30.360.10 145 285 2.2E-73 T 09-03-2017 NA29_RS16800 74f4510194f6a596a393f8c1d8150fdd 314 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 121 9.1E-13 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 NA29_RS16800 74f4510194f6a596a393f8c1d8150fdd 314 Gene3D G3DSA:3.40.50.720 5 144 2.2E-74 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16800 74f4510194f6a596a393f8c1d8150fdd 314 SUPERFAMILY SSF51735 5 156 3.94E-28 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16800 74f4510194f6a596a393f8c1d8150fdd 314 SMART SM00859 8 124 2.1E-13 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 NA29_RS16800 74f4510194f6a596a393f8c1d8150fdd 314 SUPERFAMILY SSF55347 132 285 1.9E-65 T 09-03-2017 NA29_RS16800 74f4510194f6a596a393f8c1d8150fdd 314 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 132 285 1.7E-63 T 09-03-2017 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 NA29_RS16800 74f4510194f6a596a393f8c1d8150fdd 314 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 6 310 6.5E-144 T 09-03-2017 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 NA29_RS16300 96c3a588e7adfe99e5b5e4048cec14f5 340 PIRSF PIRSF018296 1 339 1.3E-101 T 09-03-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 NA29_RS16300 96c3a588e7adfe99e5b5e4048cec14f5 340 Hamap MF_00611 Protein FdhE [fdhE]. 2 336 33.424 T 09-03-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 NA29_RS16300 96c3a588e7adfe99e5b5e4048cec14f5 340 SUPERFAMILY SSF144020 275 335 4.45E-21 T 09-03-2017 IPR024064 FdhE-like NA29_RS16300 96c3a588e7adfe99e5b5e4048cec14f5 340 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 1 246 8.0E-64 T 09-03-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 NA29_RS16300 96c3a588e7adfe99e5b5e4048cec14f5 340 SUPERFAMILY SSF144020 18 242 2.35E-60 T 09-03-2017 IPR024064 FdhE-like NA29_RS16300 96c3a588e7adfe99e5b5e4048cec14f5 340 Pfam PF04216 Protein involved in formate dehydrogenase formation 14 334 1.9E-116 T 09-03-2017 IPR006452 Formate dehydrogenase accessory protein GO:0005737 NA29_RS16300 96c3a588e7adfe99e5b5e4048cec14f5 340 Gene3D G3DSA:3.90.1670.10 18 244 4.9E-92 T 09-03-2017 IPR024064 FdhE-like NA29_RS16300 96c3a588e7adfe99e5b5e4048cec14f5 340 Gene3D G3DSA:3.90.1670.10 279 336 4.9E-92 T 09-03-2017 IPR024064 FdhE-like NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 SUPERFAMILY SSF81767 227 371 1.96E-43 T 09-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 SUPERFAMILY SSF52540 4 228 5.93E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 SUPERFAMILY SSF52540 371 418 5.93E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 SMART SM00957 6 405 0.0 T 09-03-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 SUPERFAMILY SSF81886 912 924 5.1E-82 T 09-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 SUPERFAMILY SSF81886 632 850 5.1E-82 T 09-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 Pfam PF07517 SecA DEAD-like domain 6 405 5.4E-133 T 09-03-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 Gene3D G3DSA:1.10.3060.10 658 841 3.2E-59 T 09-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 Gene3D G3DSA:3.40.50.300 422 629 6.6E-92 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 Pfam PF02810 SEC-C motif 916 934 2.4E-10 T 09-03-2017 IPR004027 SEC-C motif NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 Gene3D G3DSA:3.90.1440.10 230 371 8.0E-45 T 09-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 Pfam PF01043 SecA preprotein cross-linking domain 232 361 2.8E-37 T 09-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 842 20.034 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 SMART SM00958 228 361 3.5E-79 T 09-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 SUPERFAMILY SSF52540 422 628 5.7E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 Pfam PF07516 SecA Wing and Scaffold domain 627 839 3.2E-65 T 09-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 Gene3D G3DSA:3.40.50.300 372 419 1.0E-128 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 Gene3D G3DSA:3.40.50.300 4 228 1.0E-128 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 ProSitePatterns PS01312 SecA family signature. 503 518 - T 09-03-2017 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 PRINTS PR00906 SecA protein signature 63 87 1.3E-68 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 PRINTS PR00906 SecA protein signature 170 190 1.3E-68 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 PRINTS PR00906 SecA protein signature 342 364 1.3E-68 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 PRINTS PR00906 SecA protein signature 416 429 1.3E-68 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 PRINTS PR00906 SecA protein signature 101 115 1.3E-68 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 PRINTS PR00906 SecA protein signature 379 396 1.3E-68 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 PRINTS PR00906 SecA protein signature 117 127 1.3E-68 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NA29_RS22410 4405ab4c981b7287a8907aa30761939e 936 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 828 0.0 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 NA29_RS15465 a04aa6bd2ebd9f68edca674b030a5687 475 SUPERFAMILY SSF53383 123 468 5.01E-75 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS15465 a04aa6bd2ebd9f68edca674b030a5687 475 SMART SM00345 23 82 1.5E-12 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS15465 a04aa6bd2ebd9f68edca674b030a5687 475 Gene3D G3DSA:3.40.640.10 146 370 4.5E-64 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS15465 a04aa6bd2ebd9f68edca674b030a5687 475 SUPERFAMILY SSF46785 15 86 1.03E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15465 a04aa6bd2ebd9f68edca674b030a5687 475 Pfam PF00155 Aminotransferase class I and II 166 462 2.2E-30 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS15465 a04aa6bd2ebd9f68edca674b030a5687 475 Gene3D G3DSA:1.10.10.10 16 85 1.2E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15465 a04aa6bd2ebd9f68edca674b030a5687 475 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 82 1.0E-12 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS20325 4ade54e49c5d025c4b7ab7871c093af5 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 289 4.6E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS20325 4ade54e49c5d025c4b7ab7871c093af5 302 SUPERFAMILY SSF161098 97 283 9.81E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS20325 4ade54e49c5d025c4b7ab7871c093af5 302 Gene3D G3DSA:1.10.3720.10 103 294 5.7E-17 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS20475 9b3bfaf520a23379f0a85a374bcb85fe 288 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 9 284 1.1E-96 T 09-03-2017 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 NA29_RS20475 9b3bfaf520a23379f0a85a374bcb85fe 288 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 2 285 27.875 T 09-03-2017 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 NA29_RS20475 9b3bfaf520a23379f0a85a374bcb85fe 288 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 64 86 - T 09-03-2017 IPR030470 UbiA prenyltransferase conserved site NA29_RS20475 9b3bfaf520a23379f0a85a374bcb85fe 288 Pfam PF01040 UbiA prenyltransferase family 25 269 7.0E-62 T 09-03-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 SUPERFAMILY SSF81442 43 558 4.19E-183 T 09-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 Gene3D G3DSA:1.20.210.10 40 588 1.1E-191 T 09-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 502 5.1E-143 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 646 0.0 T 09-03-2017 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 279 333 - T 09-03-2017 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 338 1.0E-96 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 410 429 1.0E-96 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 277 298 1.0E-96 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 123 147 1.0E-96 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 215 1.0E-96 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 382 400 1.0E-96 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 460 481 1.0E-96 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.0E-96 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 119 1.0E-96 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 226 245 1.0E-96 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 347 368 1.0E-96 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06385 c52207dc2e5dbc8162cbb50d28790e4c 659 PRINTS PR01165 Cytochrome c oxidase subunit I signature 165 177 1.0E-96 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS11370 30c8f307acab88fac482d9692199eebf 445 Pfam PF00672 HAMP domain 170 234 1.4E-11 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS11370 30c8f307acab88fac482d9692199eebf 445 SUPERFAMILY SSF47384 224 294 1.96E-8 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS11370 30c8f307acab88fac482d9692199eebf 445 SUPERFAMILY SSF55874 306 444 1.96E-30 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS11370 30c8f307acab88fac482d9692199eebf 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 1.6E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS11370 30c8f307acab88fac482d9692199eebf 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.6E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS11370 30c8f307acab88fac482d9692199eebf 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 1.6E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS11370 30c8f307acab88fac482d9692199eebf 445 Gene3D G3DSA:1.10.287.130 231 284 4.9E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS11370 30c8f307acab88fac482d9692199eebf 445 SMART SM00304 187 239 3.6E-7 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS11370 30c8f307acab88fac482d9692199eebf 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 444 1.3E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS11370 30c8f307acab88fac482d9692199eebf 445 SMART SM00387 338 445 3.0E-26 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS11370 30c8f307acab88fac482d9692199eebf 445 Gene3D G3DSA:3.30.565.10 285 444 9.3E-32 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS11370 30c8f307acab88fac482d9692199eebf 445 SMART SM00388 240 298 8.1E-5 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS22865 38a29dfa7748843cfe8c88b4c0c64ac8 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.8E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS22865 38a29dfa7748843cfe8c88b4c0c64ac8 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.8E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS22865 38a29dfa7748843cfe8c88b4c0c64ac8 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.8E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS22865 38a29dfa7748843cfe8c88b4c0c64ac8 261 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 7 261 1.5E-103 T 09-03-2017 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 NA29_RS22865 38a29dfa7748843cfe8c88b4c0c64ac8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.1E-29 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS22865 38a29dfa7748843cfe8c88b4c0c64ac8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.1E-29 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS22865 38a29dfa7748843cfe8c88b4c0c64ac8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.1E-29 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS22865 38a29dfa7748843cfe8c88b4c0c64ac8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 6.1E-29 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS22865 38a29dfa7748843cfe8c88b4c0c64ac8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.1E-29 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS22865 38a29dfa7748843cfe8c88b4c0c64ac8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.1E-29 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS22865 38a29dfa7748843cfe8c88b4c0c64ac8 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS22865 38a29dfa7748843cfe8c88b4c0c64ac8 261 Gene3D G3DSA:3.40.50.720 1 260 7.7E-76 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22865 38a29dfa7748843cfe8c88b4c0c64ac8 261 Pfam PF00106 short chain dehydrogenase 7 198 1.1E-52 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS22865 38a29dfa7748843cfe8c88b4c0c64ac8 261 SUPERFAMILY SSF51735 5 260 1.21E-72 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS20010 bb593d7ab49b4e2a043a234bb066e4e7 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 0.0012 T 09-03-2017 NA29_RS20010 bb593d7ab49b4e2a043a234bb066e4e7 247 SUPERFAMILY SSF51735 6 246 1.45E-77 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS20010 bb593d7ab49b4e2a043a234bb066e4e7 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.0E-37 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20010 bb593d7ab49b4e2a043a234bb066e4e7 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.0E-37 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20010 bb593d7ab49b4e2a043a234bb066e4e7 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.0E-37 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20010 bb593d7ab49b4e2a043a234bb066e4e7 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.0E-37 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20010 bb593d7ab49b4e2a043a234bb066e4e7 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.0E-37 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20010 bb593d7ab49b4e2a043a234bb066e4e7 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.0E-37 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20010 bb593d7ab49b4e2a043a234bb066e4e7 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 246 4.1E-61 T 09-03-2017 NA29_RS20010 bb593d7ab49b4e2a043a234bb066e4e7 247 Gene3D G3DSA:3.40.50.720 3 246 9.5E-79 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS20010 bb593d7ab49b4e2a043a234bb066e4e7 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 6.8E-12 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20010 bb593d7ab49b4e2a043a234bb066e4e7 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 6.8E-12 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20010 bb593d7ab49b4e2a043a234bb066e4e7 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 6.8E-12 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20690 c091c4f239cc909bfcafe08b1ee8853f 528 SMART SM00858 23 93 1.2E-11 T 09-03-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 NA29_RS20690 c091c4f239cc909bfcafe08b1ee8853f 528 Pfam PF08666 SAF domain 23 92 3.8E-11 T 09-03-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 NA29_RS20690 c091c4f239cc909bfcafe08b1ee8853f 528 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 16 528 4.3E-276 T 09-03-2017 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 NA29_RS20690 c091c4f239cc909bfcafe08b1ee8853f 528 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 120 525 2.9E-141 T 09-03-2017 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 NA29_RS00245 e9ac09b493191ab4a78e4e5801190228 117 Gene3D G3DSA:3.30.1330.40 12 116 6.0E-25 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS00245 e9ac09b493191ab4a78e4e5801190228 117 SUPERFAMILY SSF55298 5 116 9.9E-28 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS00245 e9ac09b493191ab4a78e4e5801190228 117 Pfam PF01042 Endoribonuclease L-PSP 6 116 5.4E-25 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family NA29_RS14805 8983af3618dba4a10b370174fd571b92 355 Gene3D G3DSA:3.40.718.10 2 355 7.9E-128 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 NA29_RS14805 8983af3618dba4a10b370174fd571b92 355 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 242 261 - T 09-03-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 NA29_RS14805 8983af3618dba4a10b370174fd571b92 355 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 351 2.3E-131 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 NA29_RS14805 8983af3618dba4a10b370174fd571b92 355 SMART SM01329 2 351 2.0E-203 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 NA29_RS14805 8983af3618dba4a10b370174fd571b92 355 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 2 349 1.2E-149 T 09-03-2017 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 NA29_RS14805 8983af3618dba4a10b370174fd571b92 355 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 355 50.67 T 09-03-2017 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 NA29_RS14805 8983af3618dba4a10b370174fd571b92 355 SUPERFAMILY SSF53659 1 355 7.02E-121 T 09-03-2017 NA29_RS08495 fa8614f9760907863dc04abd7327cd55 367 Pfam PF01266 FAD dependent oxidoreductase 6 345 2.9E-49 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS08495 fa8614f9760907863dc04abd7327cd55 367 Gene3D G3DSA:3.30.9.10 109 119 1.6E-10 T 09-03-2017 NA29_RS08495 fa8614f9760907863dc04abd7327cd55 367 Gene3D G3DSA:3.30.9.10 217 306 1.6E-10 T 09-03-2017 NA29_RS08495 fa8614f9760907863dc04abd7327cd55 367 SUPERFAMILY SSF54373 227 309 3.66E-14 T 09-03-2017 NA29_RS08495 fa8614f9760907863dc04abd7327cd55 367 SUPERFAMILY SSF51905 4 227 2.89E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08495 fa8614f9760907863dc04abd7327cd55 367 SUPERFAMILY SSF51905 310 365 2.89E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08495 fa8614f9760907863dc04abd7327cd55 367 Gene3D G3DSA:3.50.50.60 145 216 5.2E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08495 fa8614f9760907863dc04abd7327cd55 367 Gene3D G3DSA:3.50.50.60 1 84 5.2E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08495 fa8614f9760907863dc04abd7327cd55 367 Gene3D G3DSA:3.50.50.60 310 365 5.2E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS01375 d4e3e189667652ed89176672f7c4d533 266 Pfam PF02814 UreE urease accessory protein, N-terminal domain 34 89 9.3E-22 T 09-03-2017 IPR004029 UreE urease accessory, N-terminal NA29_RS01375 d4e3e189667652ed89176672f7c4d533 266 SUPERFAMILY SSF69287 35 94 1.7E-17 T 09-03-2017 IPR004029 UreE urease accessory, N-terminal NA29_RS01375 d4e3e189667652ed89176672f7c4d533 266 Gene3D G3DSA:3.30.70.790 97 167 4.0E-28 T 09-03-2017 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 NA29_RS01375 d4e3e189667652ed89176672f7c4d533 266 SMART SM00988 26 89 2.2E-21 T 09-03-2017 IPR004029 UreE urease accessory, N-terminal NA29_RS01375 d4e3e189667652ed89176672f7c4d533 266 Pfam PF05194 UreE urease accessory protein, C-terminal domain 96 202 5.4E-10 T 09-03-2017 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 NA29_RS01375 d4e3e189667652ed89176672f7c4d533 266 Gene3D G3DSA:2.60.260.20 37 93 2.7E-19 T 09-03-2017 NA29_RS01375 d4e3e189667652ed89176672f7c4d533 266 SUPERFAMILY SSF69737 96 162 8.63E-19 T 09-03-2017 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 NA29_RS01375 d4e3e189667652ed89176672f7c4d533 266 Hamap MF_00822 Urease accessory protein UreE [ureE]. 21 163 23.758 T 09-03-2017 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 NA29_RS09215 ac4fd39769e42c2b66b37360c002c2d0 504 Pfam PF07690 Major Facilitator Superfamily 19 407 4.2E-27 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS09215 ac4fd39769e42c2b66b37360c002c2d0 504 Gene3D G3DSA:1.20.1250.20 18 182 2.6E-22 T 09-03-2017 NA29_RS09215 ac4fd39769e42c2b66b37360c002c2d0 504 Gene3D G3DSA:1.20.1250.20 438 496 2.8E-5 T 09-03-2017 NA29_RS09215 ac4fd39769e42c2b66b37360c002c2d0 504 Gene3D G3DSA:1.20.1250.20 257 387 2.8E-5 T 09-03-2017 NA29_RS09215 ac4fd39769e42c2b66b37360c002c2d0 504 SUPERFAMILY SSF103473 477 499 2.88E-36 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS09215 ac4fd39769e42c2b66b37360c002c2d0 504 SUPERFAMILY SSF103473 10 189 2.88E-36 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS09215 ac4fd39769e42c2b66b37360c002c2d0 504 SUPERFAMILY SSF103473 245 417 2.88E-36 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS06750 9460a38503738f088d7635a6a09d4be9 903 Gene3D G3DSA:1.25.50.10 564 903 2.9E-131 T 09-03-2017 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal NA29_RS06750 9460a38503738f088d7635a6a09d4be9 903 Pfam PF11940 Domain of unknown function (DUF3458) 466 860 2.9E-151 T 09-03-2017 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal NA29_RS06750 9460a38503738f088d7635a6a09d4be9 903 Gene3D G3DSA:1.10.390.10 311 458 1.9E-30 T 09-03-2017 NA29_RS06750 9460a38503738f088d7635a6a09d4be9 903 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 129 144 4.0E-10 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NA29_RS06750 9460a38503738f088d7635a6a09d4be9 903 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 179 194 4.0E-10 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NA29_RS06750 9460a38503738f088d7635a6a09d4be9 903 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 297 312 4.0E-10 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NA29_RS06750 9460a38503738f088d7635a6a09d4be9 903 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 261 271 4.0E-10 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NA29_RS06750 9460a38503738f088d7635a6a09d4be9 903 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 316 328 4.0E-10 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NA29_RS06750 9460a38503738f088d7635a6a09d4be9 903 Pfam PF01433 Peptidase family M1 118 391 2.6E-59 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 NA29_RS06750 9460a38503738f088d7635a6a09d4be9 903 SUPERFAMILY SSF63737 8 195 4.45E-42 T 09-03-2017 NA29_RS06750 9460a38503738f088d7635a6a09d4be9 903 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 14 902 0.0 T 09-03-2017 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 NA29_RS06750 9460a38503738f088d7635a6a09d4be9 903 SUPERFAMILY SSF55486 209 458 8.27E-73 T 09-03-2017 NA29_RS24850 a40cccdfb312559187b66bbc32742efb 146 SUPERFAMILY SSF101801 62 144 1.44E-25 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) NA29_RS24850 a40cccdfb312559187b66bbc32742efb 146 PRINTS PR00956 Flagellar motor switch protein FliN signature 111 126 1.2E-28 T 09-03-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 NA29_RS24850 a40cccdfb312559187b66bbc32742efb 146 PRINTS PR00956 Flagellar motor switch protein FliN signature 82 98 1.2E-28 T 09-03-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 NA29_RS24850 a40cccdfb312559187b66bbc32742efb 146 PRINTS PR00956 Flagellar motor switch protein FliN signature 98 111 1.2E-28 T 09-03-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 NA29_RS24850 a40cccdfb312559187b66bbc32742efb 146 PRINTS PR00956 Flagellar motor switch protein FliN signature 65 81 1.2E-28 T 09-03-2017 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 NA29_RS24850 a40cccdfb312559187b66bbc32742efb 146 Gene3D G3DSA:2.30.330.10 59 145 5.3E-39 T 09-03-2017 NA29_RS24850 a40cccdfb312559187b66bbc32742efb 146 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 62 137 4.6E-32 T 09-03-2017 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 NA29_RS24850 a40cccdfb312559187b66bbc32742efb 146 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 65 135 7.3E-24 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) NA29_RS02965 8b84a3bf520a4d02022635dd3bc0a1a8 417 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 21 364 2.0E-26 T 09-03-2017 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 NA29_RS02965 8b84a3bf520a4d02022635dd3bc0a1a8 417 SUPERFAMILY SSF53649 7 413 4.06E-103 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NA29_RS02965 8b84a3bf520a4d02022635dd3bc0a1a8 417 Gene3D G3DSA:3.40.720.10 8 313 2.1E-62 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NA29_RS02965 8b84a3bf520a4d02022635dd3bc0a1a8 417 TIGRFAM TIGR02335 hydr_PhnA: phosphonoacetate hydrolase 7 417 3.5E-180 T 09-03-2017 IPR012710 Phosphonoacetate hydrolase GO:0047400 KEGG: 00440+3.11.1.2 NA29_RS07785 906bed4b52905719e208f2f99d6cbb32 258 Pfam PF00005 ABC transporter 22 165 2.1E-26 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS07785 906bed4b52905719e208f2f99d6cbb32 258 SUPERFAMILY SSF52540 4 237 6.71E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07785 906bed4b52905719e208f2f99d6cbb32 258 Gene3D G3DSA:3.40.50.300 3 233 2.0E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07785 906bed4b52905719e208f2f99d6cbb32 258 SMART SM00382 30 214 1.9E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS07785 906bed4b52905719e208f2f99d6cbb32 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 237 2.3E-10 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS16105 21158af832fdb306132602db32b9f4c6 217 Gene3D G3DSA:3.40.30.10 3 213 1.4E-48 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS16105 21158af832fdb306132602db32b9f4c6 217 Pfam PF01323 DSBA-like thioredoxin domain 6 210 3.6E-37 T 09-03-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 NA29_RS16105 21158af832fdb306132602db32b9f4c6 217 SUPERFAMILY SSF52833 1 215 1.17E-51 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS09330 461047a54841e55ea541f235a3783243 118 Gene3D G3DSA:3.30.1330.40 12 114 2.5E-25 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS09330 461047a54841e55ea541f235a3783243 118 Pfam PF01042 Endoribonuclease L-PSP 6 114 2.4E-25 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family NA29_RS09330 461047a54841e55ea541f235a3783243 118 SUPERFAMILY SSF55298 10 115 1.73E-29 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS21805 354a8df53084302884cccfd0b7d6c54b 540 Pfam PF17200 Single Cache domain 2 38 184 4.7E-37 T 09-03-2017 IPR033480 Single Cache domain 2 NA29_RS21805 354a8df53084302884cccfd0b7d6c54b 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 511 5.9E-61 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS21805 354a8df53084302884cccfd0b7d6c54b 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 7.1E-59 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS21805 354a8df53084302884cccfd0b7d6c54b 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 7.1E-59 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS21805 354a8df53084302884cccfd0b7d6c54b 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 7.1E-59 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS21805 354a8df53084302884cccfd0b7d6c54b 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 7.1E-59 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS21805 354a8df53084302884cccfd0b7d6c54b 540 SMART SM00283 265 512 7.2E-89 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS21805 354a8df53084302884cccfd0b7d6c54b 540 Gene3D G3DSA:3.30.450.20 21 179 3.6E-46 T 09-03-2017 NA29_RS21805 354a8df53084302884cccfd0b7d6c54b 540 Gene3D G3DSA:1.10.287.950 279 484 2.3E-62 T 09-03-2017 NA29_RS21805 354a8df53084302884cccfd0b7d6c54b 540 SMART SM01049 33 127 1.9E-32 T 09-03-2017 IPR033480 Single Cache domain 2 NA29_RS21805 354a8df53084302884cccfd0b7d6c54b 540 SUPERFAMILY SSF58104 244 513 2.49E-70 T 09-03-2017 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Gene3D G3DSA:3.90.1110.10 158 235 1.9E-63 T 09-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Gene3D G3DSA:3.90.1110.10 352 450 1.9E-63 T 09-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1368 12.188 T 09-03-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Pfam PF04560 RNA polymerase Rpb2, domain 7 1292 1365 1.6E-25 T 09-03-2017 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Pfam PF10385 RNA polymerase beta subunit external 1 domain 597 662 1.1E-23 T 09-03-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Pfam PF04565 RNA polymerase Rpb2, domain 3 519 586 9.2E-32 T 09-03-2017 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Pfam PF00562 RNA polymerase Rpb2, domain 6 726 1290 2.6E-157 T 09-03-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Gene3D G3DSA:2.40.270.10 1079 1268 2.7E-84 T 09-03-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Gene3D G3DSA:2.40.270.10 799 826 2.7E-84 T 09-03-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Gene3D G3DSA:2.30.150.10 598 662 1.4E-26 T 09-03-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Pfam PF04563 RNA polymerase beta subunit 27 506 3.0E-33 T 09-03-2017 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1082 1094 - T 09-03-2017 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Gene3D G3DSA:2.40.50.150 1064 1078 2.4E-57 T 09-03-2017 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Gene3D G3DSA:2.40.50.150 834 943 2.4E-57 T 09-03-2017 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 SUPERFAMILY SSF64484 12 232 0.0 T 09-03-2017 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 SUPERFAMILY SSF64484 349 945 0.0 T 09-03-2017 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 SUPERFAMILY SSF64484 1058 1366 0.0 T 09-03-2017 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1364 0.0 T 09-03-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Pfam PF04561 RNA polymerase Rpb2, domain 2 361 460 1.2E-13 T 09-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Pfam PF04561 RNA polymerase Rpb2, domain 2 156 228 6.6E-7 T 09-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Gene3D G3DSA:2.40.50.100 722 798 8.7E-28 T 09-03-2017 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Gene3D G3DSA:3.90.1100.10 21 156 1.6E-144 T 09-03-2017 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Gene3D G3DSA:3.90.1100.10 665 719 1.6E-144 T 09-03-2017 NA29_RS24020 ce709f75b361c8902920bdbb8557df18 1368 Gene3D G3DSA:3.90.1100.10 451 597 1.6E-144 T 09-03-2017 NA29_RS07725 a10d81fcdd3caf329f5bc12a5a9d11ed 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 4.0E-6 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS07725 a10d81fcdd3caf329f5bc12a5a9d11ed 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 59 2.1E-18 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS07725 a10d81fcdd3caf329f5bc12a5a9d11ed 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.2E-10 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS07725 a10d81fcdd3caf329f5bc12a5a9d11ed 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.2E-10 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS07725 a10d81fcdd3caf329f5bc12a5a9d11ed 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.2E-10 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS07725 a10d81fcdd3caf329f5bc12a5a9d11ed 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.2E-10 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS07725 a10d81fcdd3caf329f5bc12a5a9d11ed 70 Pfam PF01165 Ribosomal protein S21 4 57 7.0E-18 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS07725 a10d81fcdd3caf329f5bc12a5a9d11ed 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 18.156 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS15495 9f7cad411323a7252babc2ff343b4b30 425 Gene3D G3DSA:1.20.1250.20 238 414 3.4E-17 T 09-03-2017 NA29_RS15495 9f7cad411323a7252babc2ff343b4b30 425 Gene3D G3DSA:1.20.1250.20 41 217 2.2E-25 T 09-03-2017 NA29_RS15495 9f7cad411323a7252babc2ff343b4b30 425 SUPERFAMILY SSF103473 35 414 5.36E-61 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS15495 9f7cad411323a7252babc2ff343b4b30 425 Pfam PF07690 Major Facilitator Superfamily 42 266 8.8E-25 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS16810 bfa0d203921e1adcaf604f58c86e8287 418 Pfam PF07690 Major Facilitator Superfamily 13 335 7.1E-21 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS16810 bfa0d203921e1adcaf604f58c86e8287 418 Gene3D G3DSA:1.20.1250.20 220 400 4.3E-5 T 09-03-2017 NA29_RS16810 bfa0d203921e1adcaf604f58c86e8287 418 Gene3D G3DSA:1.20.1250.20 5 203 2.4E-19 T 09-03-2017 NA29_RS16810 bfa0d203921e1adcaf604f58c86e8287 418 SUPERFAMILY SSF103473 5 396 5.89E-38 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS16810 bfa0d203921e1adcaf604f58c86e8287 418 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 88 388 6.5E-80 T 09-03-2017 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 NA29_RS21085 f8c7a3b5a76386b3ec1b02ebe31efa15 239 Gene3D G3DSA:1.20.120.530 82 231 1.9E-28 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS21085 f8c7a3b5a76386b3ec1b02ebe31efa15 239 SMART SM00895 86 228 7.3E-22 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS21085 f8c7a3b5a76386b3ec1b02ebe31efa15 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 61 3.9E-20 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS21085 f8c7a3b5a76386b3ec1b02ebe31efa15 239 SUPERFAMILY SSF46785 2 65 3.62E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21085 f8c7a3b5a76386b3ec1b02ebe31efa15 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 51 2.9E-11 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS21085 f8c7a3b5a76386b3ec1b02ebe31efa15 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 21 35 2.9E-11 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS21085 f8c7a3b5a76386b3ec1b02ebe31efa15 239 SUPERFAMILY SSF48008 83 231 1.73E-23 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS21085 f8c7a3b5a76386b3ec1b02ebe31efa15 239 SMART SM00345 2 61 1.0E-21 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS21085 f8c7a3b5a76386b3ec1b02ebe31efa15 239 Pfam PF07729 FCD domain 86 226 6.9E-24 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS21085 f8c7a3b5a76386b3ec1b02ebe31efa15 239 Gene3D G3DSA:1.10.10.10 2 71 1.6E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01205 a0f7bc1d59c775246087c79204de9ca9 399 Gene3D G3DSA:3.40.50.2300 150 326 3.2E-42 T 09-03-2017 NA29_RS01205 a0f7bc1d59c775246087c79204de9ca9 399 Pfam PF13458 Periplasmic binding protein 28 373 3.6E-71 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS01205 a0f7bc1d59c775246087c79204de9ca9 399 SUPERFAMILY SSF53822 28 385 1.03E-80 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS01205 a0f7bc1d59c775246087c79204de9ca9 399 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 282 295 2.5E-7 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS01205 a0f7bc1d59c775246087c79204de9ca9 399 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 91 101 2.5E-7 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS01205 a0f7bc1d59c775246087c79204de9ca9 399 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 337 352 2.5E-7 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS01205 a0f7bc1d59c775246087c79204de9ca9 399 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 2.5E-7 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS00195 c40f2959475a6313c5fd3cf173de5dbd 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 119 1.2E-15 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NA29_RS00195 c40f2959475a6313c5fd3cf173de5dbd 230 Gene3D G3DSA:1.10.3720.10 15 223 5.8E-39 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS00195 c40f2959475a6313c5fd3cf173de5dbd 230 SUPERFAMILY SSF161098 16 210 7.06E-37 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS00195 c40f2959475a6313c5fd3cf173de5dbd 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 225 1.8E-14 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS13355 fe6bc0bd311ee79f19623bc46a06eaf9 280 Gene3D G3DSA:3.40.1190.20 15 274 6.6E-103 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS13355 fe6bc0bd311ee79f19623bc46a06eaf9 280 SUPERFAMILY SSF53613 14 277 1.71E-82 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS13355 fe6bc0bd311ee79f19623bc46a06eaf9 280 Pfam PF08543 Phosphomethylpyrimidine kinase 24 271 1.7E-93 T 09-03-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 NA29_RS13355 fe6bc0bd311ee79f19623bc46a06eaf9 280 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 17 273 2.5E-102 T 09-03-2017 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 NA29_RS06895 05c3bd6420c53117d65a557d6d444bc7 309 Gene3D G3DSA:3.40.50.300 47 188 7.6E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06895 05c3bd6420c53117d65a557d6d444bc7 309 SUPERFAMILY SSF52540 138 188 5.26E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06895 05c3bd6420c53117d65a557d6d444bc7 309 SUPERFAMILY SSF52540 47 106 6.9E-11 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23480 1af5b92364562706fb2cc653e07740e6 195 Gene3D G3DSA:3.30.230.40 1 88 3.7E-37 T 09-03-2017 NA29_RS23480 1af5b92364562706fb2cc653e07740e6 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 42.677 T 09-03-2017 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 NA29_RS23480 1af5b92364562706fb2cc653e07740e6 195 Gene3D G3DSA:3.30.230.40 90 195 5.7E-30 T 09-03-2017 NA29_RS23480 1af5b92364562706fb2cc653e07740e6 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 09-03-2017 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 NA29_RS23480 1af5b92364562706fb2cc653e07740e6 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 09-03-2017 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 NA29_RS23480 1af5b92364562706fb2cc653e07740e6 195 SUPERFAMILY SSF54211 2 86 3.92E-33 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS23480 1af5b92364562706fb2cc653e07740e6 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 9.5E-62 T 09-03-2017 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 NA29_RS23480 1af5b92364562706fb2cc653e07740e6 195 SUPERFAMILY SSF54211 87 179 3.03E-34 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS07235 dea6527afeac7068c27f5a838989cc66 467 ProSitePatterns PS00928 Trehalase signature 2. 366 375 - T 09-03-2017 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 NA29_RS07235 dea6527afeac7068c27f5a838989cc66 467 SUPERFAMILY SSF48208 18 453 2.21E-132 T 09-03-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 NA29_RS07235 dea6527afeac7068c27f5a838989cc66 467 PRINTS PR00744 Glycosyl hydrolase family 37 signature 112 130 9.2E-43 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 NA29_RS07235 dea6527afeac7068c27f5a838989cc66 467 PRINTS PR00744 Glycosyl hydrolase family 37 signature 252 269 9.2E-43 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 NA29_RS07235 dea6527afeac7068c27f5a838989cc66 467 PRINTS PR00744 Glycosyl hydrolase family 37 signature 220 237 9.2E-43 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 NA29_RS07235 dea6527afeac7068c27f5a838989cc66 467 PRINTS PR00744 Glycosyl hydrolase family 37 signature 440 453 9.2E-43 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 NA29_RS07235 dea6527afeac7068c27f5a838989cc66 467 PRINTS PR00744 Glycosyl hydrolase family 37 signature 186 203 9.2E-43 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 NA29_RS07235 dea6527afeac7068c27f5a838989cc66 467 PRINTS PR00744 Glycosyl hydrolase family 37 signature 295 311 9.2E-43 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 NA29_RS07235 dea6527afeac7068c27f5a838989cc66 467 PRINTS PR00744 Glycosyl hydrolase family 37 signature 359 375 9.2E-43 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 NA29_RS07235 dea6527afeac7068c27f5a838989cc66 467 ProSitePatterns PS00927 Trehalase signature 1. 70 83 - T 09-03-2017 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 NA29_RS07235 dea6527afeac7068c27f5a838989cc66 467 Pfam PF01204 Trehalase 50 454 3.9E-143 T 09-03-2017 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 NA29_RS23835 f03438997d6e552d3c2dbf82e449a621 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.4E-39 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23835 f03438997d6e552d3c2dbf82e449a621 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.4E-39 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23835 f03438997d6e552d3c2dbf82e449a621 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.4E-39 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23835 f03438997d6e552d3c2dbf82e449a621 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.4E-39 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23835 f03438997d6e552d3c2dbf82e449a621 138 SUPERFAMILY SSF54686 1 134 1.15E-53 T 09-03-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 NA29_RS23835 f03438997d6e552d3c2dbf82e449a621 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 2.0E-48 T 09-03-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 NA29_RS23835 f03438997d6e552d3c2dbf82e449a621 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 2.9E-59 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23835 f03438997d6e552d3c2dbf82e449a621 138 Gene3D G3DSA:3.90.1170.10 22 134 1.9E-51 T 09-03-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 NA29_RS23835 f03438997d6e552d3c2dbf82e449a621 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 09-03-2017 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23835 f03438997d6e552d3c2dbf82e449a621 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.193 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23365 2aa139425acf9e35cb4fcf29f63780e6 903 Pfam PF13155 Toprim-like 177 272 9.0E-17 T 09-03-2017 NA29_RS23365 2aa139425acf9e35cb4fcf29f63780e6 903 SUPERFAMILY SSF56731 173 262 6.28E-6 T 09-03-2017 NA29_RS23365 2aa139425acf9e35cb4fcf29f63780e6 903 Gene3D G3DSA:3.40.1360.10 174 262 2.8E-9 T 09-03-2017 NA29_RS09950 58e49872f550601f41fd4e9cb8825a90 246 Gene3D G3DSA:3.40.50.720 2 245 1.5E-78 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS09950 58e49872f550601f41fd4e9cb8825a90 246 Pfam PF00106 short chain dehydrogenase 5 197 1.5E-62 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09950 58e49872f550601f41fd4e9cb8825a90 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS09950 58e49872f550601f41fd4e9cb8825a90 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.6E-15 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09950 58e49872f550601f41fd4e9cb8825a90 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.6E-15 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09950 58e49872f550601f41fd4e9cb8825a90 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.6E-15 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09950 58e49872f550601f41fd4e9cb8825a90 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 0.0042 T 09-03-2017 NA29_RS09950 58e49872f550601f41fd4e9cb8825a90 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 3.0E-122 T 09-03-2017 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 NA29_RS09950 58e49872f550601f41fd4e9cb8825a90 246 SUPERFAMILY SSF51735 4 245 5.16E-75 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS09950 58e49872f550601f41fd4e9cb8825a90 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.0E-43 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09950 58e49872f550601f41fd4e9cb8825a90 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.0E-43 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09950 58e49872f550601f41fd4e9cb8825a90 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.0E-43 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09950 58e49872f550601f41fd4e9cb8825a90 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.0E-43 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09950 58e49872f550601f41fd4e9cb8825a90 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.0E-43 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09950 58e49872f550601f41fd4e9cb8825a90 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.0E-43 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11860 e9b9daf3d24f0e301401369fde7019b3 136 Gene3D G3DSA:3.90.1590.10 2 133 4.8E-39 T 09-03-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 NA29_RS11860 e9b9daf3d24f0e301401369fde7019b3 136 SUPERFAMILY SSF51316 2 132 3.87E-40 T 09-03-2017 IPR011057 Mss4-like NA29_RS11860 e9b9daf3d24f0e301401369fde7019b3 136 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 115 2.4E-24 T 09-03-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 NA29_RS16460 fc8186d87eb298dc22fc8277d20f2e72 416 Hamap MF_00742 Formyl-CoA:oxalate CoA-transferase [frc]. 1 416 64.331 T 09-03-2017 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695 NA29_RS16460 fc8186d87eb298dc22fc8277d20f2e72 416 SUPERFAMILY SSF89796 1 414 9.55E-127 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS16460 fc8186d87eb298dc22fc8277d20f2e72 416 Gene3D G3DSA:3.40.50.10540 327 416 2.1E-106 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS16460 fc8186d87eb298dc22fc8277d20f2e72 416 Gene3D G3DSA:3.40.50.10540 2 216 2.1E-106 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS16460 fc8186d87eb298dc22fc8277d20f2e72 416 Pfam PF02515 CoA-transferase family III 5 393 8.9E-97 T 09-03-2017 IPR003673 CoA-transferase family III GO:0003824 NA29_RS16460 fc8186d87eb298dc22fc8277d20f2e72 416 TIGRFAM TIGR03253 oxalate_frc: formyl-CoA transferase 3 415 5.9E-221 T 09-03-2017 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695 NA29_RS16460 fc8186d87eb298dc22fc8277d20f2e72 416 Gene3D G3DSA:3.30.1540.10 246 326 7.0E-30 T 09-03-2017 NA29_RS22785 37111addf330e048bf2e5c118651676b 499 Gene3D G3DSA:1.20.1250.20 259 414 9.8E-22 T 09-03-2017 NA29_RS22785 37111addf330e048bf2e5c118651676b 499 Gene3D G3DSA:1.20.1250.20 454 479 9.8E-22 T 09-03-2017 NA29_RS22785 37111addf330e048bf2e5c118651676b 499 Gene3D G3DSA:1.20.1250.20 15 191 1.7E-31 T 09-03-2017 NA29_RS22785 37111addf330e048bf2e5c118651676b 499 ProSitePatterns PS00217 Sugar transport proteins signature 2. 361 386 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS22785 37111addf330e048bf2e5c118651676b 499 PRINTS PR01036 Tetracycline resistance protein TetB signature 200 218 1.8E-10 T 09-03-2017 NA29_RS22785 37111addf330e048bf2e5c118651676b 499 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 1.8E-10 T 09-03-2017 NA29_RS22785 37111addf330e048bf2e5c118651676b 499 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 1.8E-10 T 09-03-2017 NA29_RS22785 37111addf330e048bf2e5c118651676b 499 PRINTS PR01036 Tetracycline resistance protein TetB signature 395 414 1.8E-10 T 09-03-2017 NA29_RS22785 37111addf330e048bf2e5c118651676b 499 Pfam PF07690 Major Facilitator Superfamily 17 405 2.9E-51 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS22785 37111addf330e048bf2e5c118651676b 499 SUPERFAMILY SSF103473 453 478 1.05E-68 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS22785 37111addf330e048bf2e5c118651676b 499 SUPERFAMILY SSF103473 9 200 1.05E-68 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS22785 37111addf330e048bf2e5c118651676b 499 SUPERFAMILY SSF103473 244 414 1.05E-68 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS12425 8b3ce6b4f1725c813ab11d8408c38910 224 Pfam PF00072 Response regulator receiver domain 3 111 6.1E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS12425 8b3ce6b4f1725c813ab11d8408c38910 224 SUPERFAMILY SSF52172 1 177 1.66E-39 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS12425 8b3ce6b4f1725c813ab11d8408c38910 224 Gene3D G3DSA:1.10.10.10 123 221 7.3E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12425 8b3ce6b4f1725c813ab11d8408c38910 224 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 219 2.6E-88 T 09-03-2017 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 NA29_RS12425 8b3ce6b4f1725c813ab11d8408c38910 224 SMART SM00448 1 111 9.7E-42 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS12425 8b3ce6b4f1725c813ab11d8408c38910 224 SMART SM00862 144 219 6.5E-22 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS12425 8b3ce6b4f1725c813ab11d8408c38910 224 Gene3D G3DSA:3.40.50.2300 1 122 5.4E-38 T 09-03-2017 NA29_RS12425 8b3ce6b4f1725c813ab11d8408c38910 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 219 1.9E-22 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS14780 f2c8cc40ba28676b8b1ba7e33920adab 400 Gene3D G3DSA:3.40.50.1100 100 179 2.3E-22 T 09-03-2017 NA29_RS14780 f2c8cc40ba28676b8b1ba7e33920adab 400 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 393 52.329 T 09-03-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 NA29_RS14780 f2c8cc40ba28676b8b1ba7e33920adab 400 SUPERFAMILY SSF53686 5 390 1.83E-150 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS14780 f2c8cc40ba28676b8b1ba7e33920adab 400 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 391 1.1E-194 T 09-03-2017 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 NA29_RS14780 f2c8cc40ba28676b8b1ba7e33920adab 400 Gene3D G3DSA:3.40.50.1100 180 392 7.0E-97 T 09-03-2017 NA29_RS14780 f2c8cc40ba28676b8b1ba7e33920adab 400 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 83 97 - T 09-03-2017 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 NA29_RS14780 f2c8cc40ba28676b8b1ba7e33920adab 400 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 380 8.7E-51 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS14780 f2c8cc40ba28676b8b1ba7e33920adab 400 PIRSF PIRSF001413 1 398 5.9E-164 T 09-03-2017 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 NA29_RS18035 17e30bc6bc20cd32213c334ab1dc7871 359 Gene3D G3DSA:1.10.443.10 190 351 7.0E-33 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS18035 17e30bc6bc20cd32213c334ab1dc7871 359 SUPERFAMILY SSF56349 67 351 5.89E-46 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NA29_RS18035 17e30bc6bc20cd32213c334ab1dc7871 359 Pfam PF00589 Phage integrase family 206 348 1.9E-19 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS18035 17e30bc6bc20cd32213c334ab1dc7871 359 Gene3D G3DSA:1.10.150.130 67 182 1.3E-6 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal NA29_RS18840 0d4651ce0a67cbe4efc4bcafc10371a7 578 Gene3D G3DSA:2.40.110.10 163 265 4.1E-26 T 09-03-2017 NA29_RS18840 0d4651ce0a67cbe4efc4bcafc10371a7 578 Gene3D G3DSA:1.20.140.10 266 454 1.4E-48 T 09-03-2017 NA29_RS18840 0d4651ce0a67cbe4efc4bcafc10371a7 578 Gene3D G3DSA:1.10.540.10 38 160 6.9E-16 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS18840 0d4651ce0a67cbe4efc4bcafc10371a7 578 SUPERFAMILY SSF47203 286 452 3.06E-42 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS18840 0d4651ce0a67cbe4efc4bcafc10371a7 578 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 270 4.2E-19 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NA29_RS18840 0d4651ce0a67cbe4efc4bcafc10371a7 578 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 447 1.5E-24 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS18840 0d4651ce0a67cbe4efc4bcafc10371a7 578 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 41 159 1.5E-10 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS18840 0d4651ce0a67cbe4efc4bcafc10371a7 578 SUPERFAMILY SSF56645 37 278 3.66E-56 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NA29_RS11825 9a40e0e40224fb167462c427bfb63dc9 239 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS11825 9a40e0e40224fb167462c427bfb63dc9 239 SMART SM00382 19 215 4.2E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS11825 9a40e0e40224fb167462c427bfb63dc9 239 Pfam PF00005 ABC transporter 10 166 6.5E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS11825 9a40e0e40224fb167462c427bfb63dc9 239 SUPERFAMILY SSF52540 4 226 1.7E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11825 9a40e0e40224fb167462c427bfb63dc9 239 Gene3D G3DSA:3.40.50.300 5 227 1.6E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS16785 3e1c287deac22cf25e57159e3d460121 310 SUPERFAMILY SSF141371 204 285 1.57E-6 T 09-03-2017 NA29_RS16785 3e1c287deac22cf25e57159e3d460121 310 SUPERFAMILY SSF141371 106 201 5.69E-11 T 09-03-2017 NA29_RS16785 3e1c287deac22cf25e57159e3d460121 310 Pfam PF07238 PilZ domain 201 301 2.4E-8 T 09-03-2017 IPR009875 PilZ domain GO:0035438 NA29_RS16785 3e1c287deac22cf25e57159e3d460121 310 Pfam PF12945 Flagellar protein YcgR 108 192 1.8E-14 T 09-03-2017 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal NA29_RS16785 3e1c287deac22cf25e57159e3d460121 310 Gene3D G3DSA:2.30.110.10 107 201 3.3E-6 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS21120 24ff0e95564d37466651100263e4c0d9 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.3E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21120 24ff0e95564d37466651100263e4c0d9 303 SUPERFAMILY SSF46785 3 110 3.63E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21120 24ff0e95564d37466651100263e4c0d9 303 SUPERFAMILY SSF53850 89 293 5.07E-52 T 09-03-2017 NA29_RS21120 24ff0e95564d37466651100263e4c0d9 303 Pfam PF03466 LysR substrate binding domain 88 292 3.9E-49 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS21120 24ff0e95564d37466651100263e4c0d9 303 Gene3D G3DSA:3.40.190.10 92 176 5.0E-26 T 09-03-2017 NA29_RS21120 24ff0e95564d37466651100263e4c0d9 303 Gene3D G3DSA:1.10.10.10 3 85 1.1E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21120 24ff0e95564d37466651100263e4c0d9 303 Gene3D G3DSA:3.40.190.10 177 260 1.9E-26 T 09-03-2017 NA29_RS17225 9004d859d54c6f1a2aed09e68a561fe1 338 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 7 115 1.2E-9 T 09-03-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain NA29_RS17225 9004d859d54c6f1a2aed09e68a561fe1 338 Gene3D G3DSA:3.30.390.10 6 97 3.9E-27 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS17225 9004d859d54c6f1a2aed09e68a561fe1 338 SUPERFAMILY SSF54826 7 115 9.03E-23 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS17225 9004d859d54c6f1a2aed09e68a561fe1 338 Gene3D G3DSA:3.30.390.10 98 132 1.5E-7 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 NA29_RS17225 9004d859d54c6f1a2aed09e68a561fe1 338 SUPERFAMILY SSF51604 121 322 8.52E-48 T 09-03-2017 IPR029065 Enolase C-terminal domain-like NA29_RS17225 9004d859d54c6f1a2aed09e68a561fe1 338 Pfam PF13378 Enolase C-terminal domain-like 136 320 2.9E-26 T 09-03-2017 IPR029065 Enolase C-terminal domain-like NA29_RS17225 9004d859d54c6f1a2aed09e68a561fe1 338 SMART SM00922 133 225 2.3E-13 T 09-03-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal NA29_RS17225 9004d859d54c6f1a2aed09e68a561fe1 338 Gene3D G3DSA:3.20.20.120 133 318 7.2E-53 T 09-03-2017 IPR029065 Enolase C-terminal domain-like NA29_RS24190 14bce578e37dab54c13bc788a5b7e977 218 Gene3D G3DSA:1.10.357.10 63 199 4.6E-40 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS24190 14bce578e37dab54c13bc788a5b7e977 218 SUPERFAMILY SSF48498 89 199 8.89E-12 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS24190 14bce578e37dab54c13bc788a5b7e977 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.1E-6 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS24190 14bce578e37dab54c13bc788a5b7e977 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.1E-6 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS24190 14bce578e37dab54c13bc788a5b7e977 218 SUPERFAMILY SSF46689 2 76 2.57E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS24190 14bce578e37dab54c13bc788a5b7e977 218 Gene3D G3DSA:1.10.10.60 3 62 1.3E-19 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS24190 14bce578e37dab54c13bc788a5b7e977 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 1.4E-12 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS20040 ced581b9ed55605e1c9a5527775ae3d7 417 Gene3D G3DSA:3.40.718.10 12 417 6.2E-163 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 NA29_RS20040 ced581b9ed55605e1c9a5527775ae3d7 417 SMART SM01329 29 413 6.7E-175 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 NA29_RS20040 ced581b9ed55605e1c9a5527775ae3d7 417 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 304 323 - T 09-03-2017 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 NA29_RS20040 ced581b9ed55605e1c9a5527775ae3d7 417 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 6 417 2.6E-222 T 09-03-2017 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 NA29_RS20040 ced581b9ed55605e1c9a5527775ae3d7 417 SUPERFAMILY SSF53659 3 417 1.71E-145 T 09-03-2017 NA29_RS20040 ced581b9ed55605e1c9a5527775ae3d7 417 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 411 2.5E-115 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 NA29_RS10435 701dd23bdc45e2ae9defcab5e62824aa 542 Pfam PF00501 AMP-binding enzyme 22 441 4.3E-79 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS10435 701dd23bdc45e2ae9defcab5e62824aa 542 Gene3D G3DSA:3.40.50.980 16 193 4.7E-27 T 09-03-2017 NA29_RS10435 701dd23bdc45e2ae9defcab5e62824aa 542 Gene3D G3DSA:3.30.300.30 436 534 9.6E-25 T 09-03-2017 NA29_RS10435 701dd23bdc45e2ae9defcab5e62824aa 542 Gene3D G3DSA:2.30.38.10 362 435 9.8E-14 T 09-03-2017 NA29_RS10435 701dd23bdc45e2ae9defcab5e62824aa 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS10435 701dd23bdc45e2ae9defcab5e62824aa 542 SUPERFAMILY SSF56801 8 537 1.7E-126 T 09-03-2017 NA29_RS10435 701dd23bdc45e2ae9defcab5e62824aa 542 Gene3D G3DSA:3.40.50.980 194 343 3.2E-31 T 09-03-2017 NA29_RS10435 701dd23bdc45e2ae9defcab5e62824aa 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 525 3.6E-14 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS13145 f1891f6e61e97ede0029aa0e30211364 144 SUPERFAMILY SSF55961 1 142 8.68E-33 T 09-03-2017 NA29_RS13145 f1891f6e61e97ede0029aa0e30211364 144 Gene3D G3DSA:3.30.530.20 1 143 1.0E-44 T 09-03-2017 IPR023393 START-like domain NA29_RS13145 f1891f6e61e97ede0029aa0e30211364 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 15 134 3.3E-28 T 09-03-2017 IPR005031 Coenzyme Q-binding protein COQ10, START domain NA29_RS07615 21e304e70db253248221163cae2956e1 312 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 156 269 2.7E-13 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NA29_RS07615 21e304e70db253248221163cae2956e1 312 Gene3D G3DSA:3.10.180.10 7 115 1.6E-15 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS07615 21e304e70db253248221163cae2956e1 312 SUPERFAMILY SSF54593 6 273 6.81E-33 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS07615 21e304e70db253248221163cae2956e1 312 Gene3D G3DSA:3.10.180.10 156 305 2.2E-35 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS08210 71a5af55c4db9806419cda96d898bef8 261 Pfam PF08220 DeoR-like helix-turn-helix domain 14 66 4.7E-17 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NA29_RS08210 71a5af55c4db9806419cda96d898bef8 261 SMART SM01134 80 241 2.8E-69 T 09-03-2017 NA29_RS08210 71a5af55c4db9806419cda96d898bef8 261 SUPERFAMILY SSF100950 82 242 3.65E-26 T 09-03-2017 NA29_RS08210 71a5af55c4db9806419cda96d898bef8 261 Pfam PF00455 DeoR C terminal sensor domain 83 240 1.9E-50 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain NA29_RS08210 71a5af55c4db9806419cda96d898bef8 261 SUPERFAMILY SSF46785 11 67 5.3E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08210 71a5af55c4db9806419cda96d898bef8 261 Gene3D G3DSA:3.30.750.70 79 173 1.1E-12 T 09-03-2017 NA29_RS08210 71a5af55c4db9806419cda96d898bef8 261 SMART SM00420 14 66 4.6E-19 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NA29_RS08210 71a5af55c4db9806419cda96d898bef8 261 ProSitePatterns PS00894 DeoR-type HTH domain signature. 14 48 - T 09-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 NA29_RS08210 71a5af55c4db9806419cda96d898bef8 261 Gene3D G3DSA:1.10.10.10 10 66 1.2E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08210 71a5af55c4db9806419cda96d898bef8 261 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 46 64 2.5E-8 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NA29_RS08210 71a5af55c4db9806419cda96d898bef8 261 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 32 46 2.5E-8 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NA29_RS14210 f474f665ceeec7850f75ca07f5b931ca 337 SUPERFAMILY SSF51395 7 318 2.77E-76 T 09-03-2017 NA29_RS14210 f474f665ceeec7850f75ca07f5b931ca 337 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 306 4.9E-137 T 09-03-2017 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 NA29_RS14210 f474f665ceeec7850f75ca07f5b931ca 337 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 52.02 T 09-03-2017 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 NA29_RS14210 f474f665ceeec7850f75ca07f5b931ca 337 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 89 107 - T 09-03-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 NA29_RS14210 f474f665ceeec7850f75ca07f5b931ca 337 PIRSF PIRSF006621 1 324 5.1E-76 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 NA29_RS14210 f474f665ceeec7850f75ca07f5b931ca 337 Gene3D G3DSA:3.20.20.70 5 251 6.0E-79 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS14210 f474f665ceeec7850f75ca07f5b931ca 337 Pfam PF01207 Dihydrouridine synthase (Dus) 10 309 3.4E-80 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 NA29_RS22365 d165e2e6a024d5ebc5cfa60af37ce535 379 SUPERFAMILY SSF52540 14 373 1.08E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22365 d165e2e6a024d5ebc5cfa60af37ce535 379 Gene3D G3DSA:3.30.450.90 14 117 3.4E-41 T 09-03-2017 NA29_RS22365 d165e2e6a024d5ebc5cfa60af37ce535 379 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 212 226 - T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 NA29_RS22365 d165e2e6a024d5ebc5cfa60af37ce535 379 SMART SM00382 145 266 1.9E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS22365 d165e2e6a024d5ebc5cfa60af37ce535 379 Pfam PF00437 Type II/IV secretion system protein 19 284 6.4E-76 T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 NA29_RS22365 d165e2e6a024d5ebc5cfa60af37ce535 379 Gene3D G3DSA:3.40.50.300 123 375 4.8E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22175 975af4cbbb99bb2212774ae64ef05526 252 Pfam PF00912 Transglycosylase 78 245 3.8E-52 T 09-03-2017 IPR001264 Glycosyl transferase, family 51 NA29_RS22175 975af4cbbb99bb2212774ae64ef05526 252 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 31 250 4.1E-93 T 09-03-2017 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 NA29_RS22175 975af4cbbb99bb2212774ae64ef05526 252 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 27 251 38.945 T 09-03-2017 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 NA29_RS22175 975af4cbbb99bb2212774ae64ef05526 252 SUPERFAMILY SSF53955 75 247 3.94E-58 T 09-03-2017 IPR023346 Lysozyme-like domain NA29_RS22175 975af4cbbb99bb2212774ae64ef05526 252 Gene3D G3DSA:1.10.3810.10 79 247 4.4E-65 T 09-03-2017 NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 600 2.9E-250 T 09-03-2017 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 Pfam PF00570 HRDC domain 534 599 8.7E-22 T 09-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 Pfam PF09382 RQC domain 401 509 2.1E-38 T 09-03-2017 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 Pfam PF00270 DEAD/DEAH box helicase 20 182 4.4E-16 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 SUPERFAMILY SSF52540 5 192 2.55E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 Gene3D G3DSA:1.10.150.80 532 600 1.6E-16 T 09-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 Gene3D G3DSA:3.40.50.300 4 196 1.2E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 Pfam PF16124 RecQ zinc-binding 338 399 1.3E-16 T 09-03-2017 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 Gene3D G3DSA:3.40.50.300 201 339 5.1E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 SMART SM00487 13 213 8.7E-29 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 SMART SM00490 245 326 1.3E-22 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 Gene3D G3DSA:1.10.10.10 340 511 8.4E-58 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 SUPERFAMILY SSF47819 527 601 1.1E-21 T 09-03-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 456 2.2E-153 T 09-03-2017 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 Pfam PF00271 Helicase conserved C-terminal domain 220 326 7.0E-15 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 SMART SM00341 530 602 9.5E-12 T 09-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 SMART SM00956 406 509 1.2E-51 T 09-03-2017 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 NA29_RS19530 6273d8366a67394f402679ed7f0a6488 602 SUPERFAMILY SSF52540 203 450 1.91E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22160 8faad8142e14c9d3eec8e6a8a36ba2e5 270 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 2 268 36.663 T 09-03-2017 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686 NA29_RS22160 8faad8142e14c9d3eec8e6a8a36ba2e5 270 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 3 255 3.7E-76 T 09-03-2017 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686 NA29_RS22160 8faad8142e14c9d3eec8e6a8a36ba2e5 270 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 17 250 7.5E-34 T 09-03-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS22160 8faad8142e14c9d3eec8e6a8a36ba2e5 270 SMART SM00934 17 255 2.4E-54 T 09-03-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS22160 8faad8142e14c9d3eec8e6a8a36ba2e5 270 Gene3D G3DSA:3.20.20.70 6 262 4.9E-70 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS22160 8faad8142e14c9d3eec8e6a8a36ba2e5 270 SUPERFAMILY SSF51366 3 263 1.05E-78 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NA29_RS22160 8faad8142e14c9d3eec8e6a8a36ba2e5 270 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 90 103 - T 09-03-2017 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS20380 fd4922751ea1c9f7b668a67ee02763aa 342 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 332 27.275 T 09-03-2017 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 NA29_RS20380 fd4922751ea1c9f7b668a67ee02763aa 342 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 338 1.2E-94 T 09-03-2017 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 NA29_RS20380 fd4922751ea1c9f7b668a67ee02763aa 342 PIRSF PIRSF005485 1 342 2.5E-108 T 09-03-2017 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 NA29_RS20380 fd4922751ea1c9f7b668a67ee02763aa 342 Gene3D G3DSA:1.10.10.10 1 84 3.4E-35 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20380 fd4922751ea1c9f7b668a67ee02763aa 342 SUPERFAMILY SSF55781 71 341 1.9E-60 T 09-03-2017 IPR029016 GAF domain-like NA29_RS20380 fd4922751ea1c9f7b668a67ee02763aa 342 Pfam PF01628 HrcA protein C terminal domain 105 325 2.1E-58 T 09-03-2017 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 NA29_RS20380 fd4922751ea1c9f7b668a67ee02763aa 342 SUPERFAMILY SSF46785 1 84 7.52E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20380 fd4922751ea1c9f7b668a67ee02763aa 342 Gene3D G3DSA:3.30.450.40 177 341 1.0E-40 T 09-03-2017 IPR029016 GAF domain-like NA29_RS20380 fd4922751ea1c9f7b668a67ee02763aa 342 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 2 73 5.8E-7 T 09-03-2017 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 NA29_RS14350 fc0ae14eed6d2d36dea3950a03a96ea1 178 Gene3D G3DSA:3.40.50.2020 9 167 3.5E-37 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS14350 fc0ae14eed6d2d36dea3950a03a96ea1 178 SUPERFAMILY SSF53271 5 176 7.21E-37 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS14350 fc0ae14eed6d2d36dea3950a03a96ea1 178 Pfam PF00156 Phosphoribosyl transferase domain 14 161 3.8E-25 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 NA29_RS15310 e45af8ffad8e448ee88816ad0f9171cc 231 Pfam PF05433 Glycine zipper 2TM domain 143 182 8.1E-9 T 09-03-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 NA29_RS04655 9917da47a0c6a33ba0efedb7f8f2ce3b 480 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 477 3.5E-187 T 09-03-2017 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 NA29_RS04655 9917da47a0c6a33ba0efedb7f8f2ce3b 480 SUPERFAMILY SSF52467 308 480 5.35E-75 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS04655 9917da47a0c6a33ba0efedb7f8f2ce3b 480 PIRSF PIRSF000204 1 480 1.5E-211 T 09-03-2017 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 NA29_RS04655 9917da47a0c6a33ba0efedb7f8f2ce3b 480 Gene3D G3DSA:3.40.50.1220 304 480 6.8E-86 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS02930 3006eb9cef8292705f55dc4a3222306b 35 Pfam PF12951 Passenger-associated-transport-repeat 7 35 8.5E-8 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02930 3006eb9cef8292705f55dc4a3222306b 35 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 6 34 2.9E-10 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02930 3006eb9cef8292705f55dc4a3222306b 35 SUPERFAMILY SSF51126 1 34 9.42E-5 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS24865 3ed6dc0ce404d1c7e76c0267b9e51c51 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 85 1.1E-32 T 09-03-2017 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 NA29_RS24865 3ed6dc0ce404d1c7e76c0267b9e51c51 89 PIRSF PIRSF004669 1 89 1.7E-33 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NA29_RS24865 3ed6dc0ce404d1c7e76c0267b9e51c51 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.2E-31 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NA29_RS24865 3ed6dc0ce404d1c7e76c0267b9e51c51 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.9E-25 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NA29_RS24865 3ed6dc0ce404d1c7e76c0267b9e51c51 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.9E-25 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NA29_RS24865 3ed6dc0ce404d1c7e76c0267b9e51c51 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.9E-25 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NA29_RS24490 795069079ab6cbaecd7e25dc1a40fb64 408 Pfam PF00034 Cytochrome c 101 197 5.1E-8 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24490 795069079ab6cbaecd7e25dc1a40fb64 408 Pfam PF00034 Cytochrome c 328 404 2.9E-6 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24490 795069079ab6cbaecd7e25dc1a40fb64 408 SUPERFAMILY SSF46626 81 217 2.82E-18 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24490 795069079ab6cbaecd7e25dc1a40fb64 408 Gene3D G3DSA:1.10.760.10 95 202 4.0E-14 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24490 795069079ab6cbaecd7e25dc1a40fb64 408 SUPERFAMILY SSF46626 329 404 5.47E-15 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24490 795069079ab6cbaecd7e25dc1a40fb64 408 Gene3D G3DSA:1.10.760.10 329 404 2.0E-26 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24490 795069079ab6cbaecd7e25dc1a40fb64 408 PRINTS PR00606 Class ID cytochrome C signature 368 381 4.3E-18 T 09-03-2017 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NA29_RS24490 795069079ab6cbaecd7e25dc1a40fb64 408 PRINTS PR00606 Class ID cytochrome C signature 395 405 4.3E-18 T 09-03-2017 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NA29_RS24490 795069079ab6cbaecd7e25dc1a40fb64 408 PRINTS PR00606 Class ID cytochrome C signature 330 343 4.3E-18 T 09-03-2017 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NA29_RS24490 795069079ab6cbaecd7e25dc1a40fb64 408 PRINTS PR00606 Class ID cytochrome C signature 383 393 4.3E-18 T 09-03-2017 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NA29_RS24490 795069079ab6cbaecd7e25dc1a40fb64 408 PRINTS PR00606 Class ID cytochrome C signature 345 358 4.3E-18 T 09-03-2017 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NA29_RS07825 f1bd1a694f83c27d14c861a61e6caacc 291 SUPERFAMILY SSF51621 12 290 6.73E-91 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS07825 f1bd1a694f83c27d14c861a61e6caacc 291 Pfam PF13714 Phosphoenolpyruvate phosphomutase 16 249 3.3E-52 T 09-03-2017 NA29_RS07825 f1bd1a694f83c27d14c861a61e6caacc 291 ProSitePatterns PS00161 Isocitrate lyase signature. 120 125 - T 09-03-2017 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 NA29_RS07825 f1bd1a694f83c27d14c861a61e6caacc 291 Gene3D G3DSA:3.20.20.60 10 290 2.0E-89 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS03175 c5f8d11ab17dc25e16858c1db396daba 392 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 378 7.0E-106 T 09-03-2017 IPR017439 Amidohydrolase GO:0016787 NA29_RS03175 c5f8d11ab17dc25e16858c1db396daba 392 SUPERFAMILY SSF55031 186 296 7.2E-26 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS03175 c5f8d11ab17dc25e16858c1db396daba 392 SUPERFAMILY SSF53187 13 199 5.43E-79 T 09-03-2017 NA29_RS03175 c5f8d11ab17dc25e16858c1db396daba 392 SUPERFAMILY SSF53187 300 389 5.43E-79 T 09-03-2017 NA29_RS03175 c5f8d11ab17dc25e16858c1db396daba 392 Gene3D G3DSA:3.30.70.360 183 299 2.9E-34 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS03175 c5f8d11ab17dc25e16858c1db396daba 392 PIRSF PIRSF005962 1 391 3.9E-122 T 09-03-2017 IPR017439 Amidohydrolase GO:0016787 NA29_RS03175 c5f8d11ab17dc25e16858c1db396daba 392 Gene3D G3DSA:3.40.630.10 12 180 6.8E-91 T 09-03-2017 NA29_RS03175 c5f8d11ab17dc25e16858c1db396daba 392 Gene3D G3DSA:3.40.630.10 300 390 6.8E-91 T 09-03-2017 NA29_RS03175 c5f8d11ab17dc25e16858c1db396daba 392 Pfam PF01546 Peptidase family M20/M25/M40 74 387 6.8E-34 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NA29_RS08930 143b878f77ec037cf0b7ccd3c82ac426 283 Gene3D G3DSA:1.25.40.10 197 282 1.3E-25 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS08930 143b878f77ec037cf0b7ccd3c82ac426 283 SUPERFAMILY SSF48452 106 172 3.8E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS08930 143b878f77ec037cf0b7ccd3c82ac426 283 SUPERFAMILY SSF52833 4 106 8.5E-33 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS08930 143b878f77ec037cf0b7ccd3c82ac426 283 Pfam PF14561 Tetratricopeptide repeat 193 282 4.0E-23 T 09-03-2017 NA29_RS08930 143b878f77ec037cf0b7ccd3c82ac426 283 Pfam PF14559 Tetratricopeptide repeat 119 184 1.2E-10 T 09-03-2017 NA29_RS08930 143b878f77ec037cf0b7ccd3c82ac426 283 Gene3D G3DSA:1.25.40.10 105 194 9.4E-10 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS08930 143b878f77ec037cf0b7ccd3c82ac426 283 Pfam PF00085 Thioredoxin 5 102 2.7E-25 T 09-03-2017 IPR013766 Thioredoxin domain GO:0045454 NA29_RS08930 143b878f77ec037cf0b7ccd3c82ac426 283 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 NA29_RS08930 143b878f77ec037cf0b7ccd3c82ac426 283 TIGRFAM TIGR01068 thioredoxin: thioredoxin 15 103 9.4E-30 T 09-03-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NA29_RS08930 143b878f77ec037cf0b7ccd3c82ac426 283 PRINTS PR00421 Thioredoxin family signature 29 38 4.3E-6 T 09-03-2017 NA29_RS08930 143b878f77ec037cf0b7ccd3c82ac426 283 PRINTS PR00421 Thioredoxin family signature 69 80 4.3E-6 T 09-03-2017 NA29_RS08930 143b878f77ec037cf0b7ccd3c82ac426 283 PRINTS PR00421 Thioredoxin family signature 21 29 4.3E-6 T 09-03-2017 NA29_RS08930 143b878f77ec037cf0b7ccd3c82ac426 283 Gene3D G3DSA:3.40.30.10 6 104 1.0E-31 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS11515 53251901528cf30dc1f77632c46f4c59 362 Pfam PF00296 Luciferase-like monooxygenase 19 322 2.4E-73 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS11515 53251901528cf30dc1f77632c46f4c59 362 Gene3D G3DSA:3.20.20.30 1 349 2.5E-86 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS11515 53251901528cf30dc1f77632c46f4c59 362 SUPERFAMILY SSF51679 2 349 7.46E-79 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS01805 76db37635e61b723739186500987f15c 289 Gene3D G3DSA:3.10.310.10 126 278 6.2E-34 T 09-03-2017 NA29_RS01805 76db37635e61b723739186500987f15c 289 Gene3D G3DSA:3.10.310.10 6 125 2.2E-37 T 09-03-2017 NA29_RS01805 76db37635e61b723739186500987f15c 289 SUPERFAMILY SSF54506 5 289 5.41E-65 T 09-03-2017 NA29_RS01805 76db37635e61b723739186500987f15c 289 PIRSF PIRSF016184 2 289 1.2E-67 T 09-03-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 NA29_RS01805 76db37635e61b723739186500987f15c 289 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 273 1.8E-53 T 09-03-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 NA29_RS01805 76db37635e61b723739186500987f15c 289 Pfam PF02567 Phenazine biosynthesis-like protein 10 278 1.3E-49 T 09-03-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 NA29_RS08025 68254dfbaf4e4ee42511666458bbdfba 302 Pfam PF04542 Sigma-70 region 2 18 81 6.1E-18 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08025 68254dfbaf4e4ee42511666458bbdfba 302 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 170 1.0E-18 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08025 68254dfbaf4e4ee42511666458bbdfba 302 Gene3D G3DSA:3.10.450.50 179 292 2.8E-8 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS08025 68254dfbaf4e4ee42511666458bbdfba 302 SUPERFAMILY SSF54427 181 297 1.15E-12 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS08025 68254dfbaf4e4ee42511666458bbdfba 302 Gene3D G3DSA:1.10.10.10 117 170 3.8E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08025 68254dfbaf4e4ee42511666458bbdfba 302 Pfam PF08281 Sigma-70, region 4 117 168 3.2E-14 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08025 68254dfbaf4e4ee42511666458bbdfba 302 SUPERFAMILY SSF88946 17 95 2.79E-15 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08025 68254dfbaf4e4ee42511666458bbdfba 302 TIGRFAM TIGR02957 SigX4: RNA polymerase sigma-70 factor, TIGR02957 family 17 295 1.5E-103 T 09-03-2017 IPR014303 RNA polymerase sigma-70, ECF type NA29_RS08025 68254dfbaf4e4ee42511666458bbdfba 302 SUPERFAMILY SSF88659 112 170 7.85E-13 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08025 68254dfbaf4e4ee42511666458bbdfba 302 Gene3D G3DSA:1.10.1740.10 17 83 8.2E-16 T 09-03-2017 NA29_RS23420 c671318b4f778ccc869a8ebc59c6df61 405 Gene3D G3DSA:2.40.10.10 63 178 2.6E-38 T 09-03-2017 NA29_RS23420 c671318b4f778ccc869a8ebc59c6df61 405 Pfam PF13180 PDZ domain 307 380 1.4E-17 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS23420 c671318b4f778ccc869a8ebc59c6df61 405 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 64 393 2.1E-130 T 09-03-2017 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 NA29_RS23420 c671318b4f778ccc869a8ebc59c6df61 405 Gene3D G3DSA:2.30.42.10 292 386 2.5E-29 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS23420 c671318b4f778ccc869a8ebc59c6df61 405 Pfam PF13365 Trypsin-like peptidase domain 117 251 1.1E-34 T 09-03-2017 NA29_RS23420 c671318b4f778ccc869a8ebc59c6df61 405 Gene3D G3DSA:2.40.10.10 179 291 1.4E-42 T 09-03-2017 NA29_RS23420 c671318b4f778ccc869a8ebc59c6df61 405 PRINTS PR00834 HtrA/DegQ protease family signature 126 138 2.3E-56 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS23420 c671318b4f778ccc869a8ebc59c6df61 405 PRINTS PR00834 HtrA/DegQ protease family signature 244 261 2.3E-56 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS23420 c671318b4f778ccc869a8ebc59c6df61 405 PRINTS PR00834 HtrA/DegQ protease family signature 147 167 2.3E-56 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS23420 c671318b4f778ccc869a8ebc59c6df61 405 PRINTS PR00834 HtrA/DegQ protease family signature 187 211 2.3E-56 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS23420 c671318b4f778ccc869a8ebc59c6df61 405 PRINTS PR00834 HtrA/DegQ protease family signature 330 342 2.3E-56 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS23420 c671318b4f778ccc869a8ebc59c6df61 405 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 2.3E-56 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS23420 c671318b4f778ccc869a8ebc59c6df61 405 SUPERFAMILY SSF50156 249 373 1.31E-25 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS23420 c671318b4f778ccc869a8ebc59c6df61 405 SUPERFAMILY SSF50494 63 285 4.5E-65 T 09-03-2017 IPR009003 Peptidase S1, PA clan NA29_RS23420 c671318b4f778ccc869a8ebc59c6df61 405 SMART SM00228 290 372 6.6E-14 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS20865 b82886f12661d3276039c9a9e36a2e07 185 SUPERFAMILY SSF50249 65 126 4.03E-14 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS20865 b82886f12661d3276039c9a9e36a2e07 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 1.5E-13 T 09-03-2017 IPR013185 Translation elongation factor, KOW-like NA29_RS20865 b82886f12661d3276039c9a9e36a2e07 185 Gene3D G3DSA:2.30.30.30 1 63 1.5E-15 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 NA29_RS20865 b82886f12661d3276039c9a9e36a2e07 185 SMART SM01185 67 120 9.9E-17 T 09-03-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 NA29_RS20865 b82886f12661d3276039c9a9e36a2e07 185 SUPERFAMILY SSF50104 1 63 8.53E-13 T 09-03-2017 IPR008991 Translation protein SH3-like domain NA29_RS20865 b82886f12661d3276039c9a9e36a2e07 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 4.2E-15 T 09-03-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 NA29_RS20865 b82886f12661d3276039c9a9e36a2e07 185 TIGRFAM TIGR00038 efp: translation elongation factor P 4 185 9.6E-58 T 09-03-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 NA29_RS20865 b82886f12661d3276039c9a9e36a2e07 185 SUPERFAMILY SSF50249 128 185 1.1E-12 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS20865 b82886f12661d3276039c9a9e36a2e07 185 Pfam PF09285 Elongation factor P, C-terminal 130 184 1.7E-22 T 09-03-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 NA29_RS20865 b82886f12661d3276039c9a9e36a2e07 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 43.253 T 09-03-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 NA29_RS20865 b82886f12661d3276039c9a9e36a2e07 185 Gene3D G3DSA:2.40.50.140 65 126 1.6E-17 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS20865 b82886f12661d3276039c9a9e36a2e07 185 Gene3D G3DSA:2.40.50.140 128 185 8.0E-24 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS20865 b82886f12661d3276039c9a9e36a2e07 185 PIRSF PIRSF005901 1 185 4.2E-50 T 09-03-2017 IPR020599 Translation elongation factor P/YeiP NA29_RS20865 b82886f12661d3276039c9a9e36a2e07 185 SMART SM00841 128 184 7.2E-24 T 09-03-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 NA29_RS24805 8667b28c834539438bfd1ec5e5bfe7cd 111 Pfam PF02049 Flagellar hook-basal body complex protein FliE 28 111 4.2E-28 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 NA29_RS24805 8667b28c834539438bfd1ec5e5bfe7cd 111 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 34 111 1.8E-23 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 NA29_RS24805 8667b28c834539438bfd1ec5e5bfe7cd 111 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 40 56 6.1E-14 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 NA29_RS24805 8667b28c834539438bfd1ec5e5bfe7cd 111 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 75 91 6.1E-14 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 NA29_RS24805 8667b28c834539438bfd1ec5e5bfe7cd 111 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 96 109 6.1E-14 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 NA29_RS24805 8667b28c834539438bfd1ec5e5bfe7cd 111 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 111 16.583 T 09-03-2017 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 NA29_RS14230 678f52ec3addd2ff0163fafd34779475 210 Pfam PF00293 NUDIX domain 52 147 1.8E-12 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 NA29_RS14230 678f52ec3addd2ff0163fafd34779475 210 ProSitePatterns PS00893 Nudix box signature. 76 97 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 NA29_RS14230 678f52ec3addd2ff0163fafd34779475 210 Gene3D G3DSA:2.20.70.10 7 41 1.8E-20 T 09-03-2017 NA29_RS14230 678f52ec3addd2ff0163fafd34779475 210 PRINTS PR00502 NUDIX hydrolase family signature 85 100 1.8E-5 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 NA29_RS14230 678f52ec3addd2ff0163fafd34779475 210 PRINTS PR00502 NUDIX hydrolase family signature 71 85 1.8E-5 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 NA29_RS14230 678f52ec3addd2ff0163fafd34779475 210 Gene3D G3DSA:3.90.79.10 43 176 1.9E-32 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS14230 678f52ec3addd2ff0163fafd34779475 210 Pfam PF14803 Nudix N-terminal 9 41 4.1E-19 T 09-03-2017 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 NA29_RS14230 678f52ec3addd2ff0163fafd34779475 210 SUPERFAMILY SSF55811 8 169 3.11E-40 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS07625 2cfd97cecbab8366d4ae29b9aa792af3 473 SUPERFAMILY SSF75304 4 465 2.09E-113 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS07625 2cfd97cecbab8366d4ae29b9aa792af3 473 Gene3D G3DSA:3.90.1300.10 3 466 7.8E-115 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS07625 2cfd97cecbab8366d4ae29b9aa792af3 473 Pfam PF01425 Amidase 17 452 2.5E-90 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS19630 e49319a0344279d5e17715e3bbbc357e 212 SMART SM00448 3 119 1.2E-10 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS19630 e49319a0344279d5e17715e3bbbc357e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 6.8E-9 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS19630 e49319a0344279d5e17715e3bbbc357e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 6.8E-9 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS19630 e49319a0344279d5e17715e3bbbc357e 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 6.8E-9 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS19630 e49319a0344279d5e17715e3bbbc357e 212 Gene3D G3DSA:3.40.50.2300 2 124 5.2E-21 T 09-03-2017 NA29_RS19630 e49319a0344279d5e17715e3bbbc357e 212 SMART SM00421 149 206 2.8E-16 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS19630 e49319a0344279d5e17715e3bbbc357e 212 Pfam PF00072 Response regulator receiver domain 5 113 1.1E-18 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS19630 e49319a0344279d5e17715e3bbbc357e 212 SUPERFAMILY SSF52172 2 133 1.85E-22 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS19630 e49319a0344279d5e17715e3bbbc357e 212 Gene3D G3DSA:1.10.10.10 125 211 2.9E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19630 e49319a0344279d5e17715e3bbbc357e 212 SUPERFAMILY SSF46894 145 211 4.08E-18 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS19630 e49319a0344279d5e17715e3bbbc357e 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 3.8E-15 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS03405 2caffabb4b67b88c2587a2cdf4b33a52 302 Pfam PF03466 LysR substrate binding domain 87 290 2.9E-26 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS03405 2caffabb4b67b88c2587a2cdf4b33a52 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.9E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03405 2caffabb4b67b88c2587a2cdf4b33a52 302 Gene3D G3DSA:1.10.10.10 2 79 2.2E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03405 2caffabb4b67b88c2587a2cdf4b33a52 302 Gene3D G3DSA:3.40.190.10 174 263 1.9E-13 T 09-03-2017 NA29_RS03405 2caffabb4b67b88c2587a2cdf4b33a52 302 SUPERFAMILY SSF46785 2 81 3.11E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03405 2caffabb4b67b88c2587a2cdf4b33a52 302 SUPERFAMILY SSF53850 90 291 7.82E-27 T 09-03-2017 NA29_RS03405 2caffabb4b67b88c2587a2cdf4b33a52 302 Gene3D G3DSA:3.40.190.10 88 173 5.5E-17 T 09-03-2017 NA29_RS22570 b393c7c16938e76d2f50562fbf65432f 564 TIGRFAM TIGR02288 PaaN_2: phenylacetic acid degradation protein paaN 3 555 6.3E-273 T 09-03-2017 IPR011975 Phenylacetic acid degradation protein PaaN2 NA29_RS22570 b393c7c16938e76d2f50562fbf65432f 564 Pfam PF00171 Aldehyde dehydrogenase family 88 473 6.5E-34 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS22570 b393c7c16938e76d2f50562fbf65432f 564 Gene3D G3DSA:3.40.605.10 88 302 2.5E-30 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS22570 b393c7c16938e76d2f50562fbf65432f 564 SUPERFAMILY SSF53720 83 527 1.7E-58 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS22570 b393c7c16938e76d2f50562fbf65432f 564 Gene3D G3DSA:3.40.309.10 312 516 3.1E-28 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS12570 d11dec10e6de28c0a2a78325fd27aafd 328 SUPERFAMILY SSF51735 119 290 1.77E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS12570 d11dec10e6de28c0a2a78325fd27aafd 328 SMART SM00829 13 324 9.8E-5 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NA29_RS12570 d11dec10e6de28c0a2a78325fd27aafd 328 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 4 326 4.6E-129 T 09-03-2017 IPR014188 Acrylyl-CoA reductase AcuI NA29_RS12570 d11dec10e6de28c0a2a78325fd27aafd 328 Gene3D G3DSA:3.40.50.720 133 294 2.5E-75 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS12570 d11dec10e6de28c0a2a78325fd27aafd 328 Gene3D G3DSA:3.90.180.10 24 132 3.4E-7 T 09-03-2017 IPR011032 GroES-like NA29_RS12570 d11dec10e6de28c0a2a78325fd27aafd 328 Pfam PF00107 Zinc-binding dehydrogenase 160 284 1.7E-14 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NA29_RS12570 d11dec10e6de28c0a2a78325fd27aafd 328 SUPERFAMILY SSF50129 2 144 1.02E-39 T 09-03-2017 IPR011032 GroES-like NA29_RS12570 d11dec10e6de28c0a2a78325fd27aafd 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 90 3.1E-5 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NA29_RS17640 d5a7974428678ec08072526a359dbeba 278 SUPERFAMILY SSF52374 1 278 1.13E-96 T 09-03-2017 NA29_RS17640 d5a7974428678ec08072526a359dbeba 278 Gene3D G3DSA:3.40.50.620 1 169 1.3E-70 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS17640 d5a7974428678ec08072526a359dbeba 278 Gene3D G3DSA:3.30.1300.10 176 278 6.6E-29 T 09-03-2017 NA29_RS17640 d5a7974428678ec08072526a359dbeba 278 Pfam PF02569 Pantoate-beta-alanine ligase 3 276 1.1E-95 T 09-03-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 NA29_RS17640 d5a7974428678ec08072526a359dbeba 278 Hamap MF_00158 Pantothenate synthetase [panC]. 2 278 36.992 T 09-03-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 NA29_RS17640 d5a7974428678ec08072526a359dbeba 278 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 277 6.6E-88 T 09-03-2017 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 NA29_RS17640 d5a7974428678ec08072526a359dbeba 278 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 19 64 5.1E-8 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NA29_RS02295 532ebf917491c225b1d749a6b73deae1 297 SUPERFAMILY SSF103481 189 285 1.26E-9 T 09-03-2017 NA29_RS02295 532ebf917491c225b1d749a6b73deae1 297 SUPERFAMILY SSF103481 42 145 8.5E-13 T 09-03-2017 NA29_RS02295 532ebf917491c225b1d749a6b73deae1 297 Pfam PF00892 EamA-like transporter family 10 141 1.4E-12 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS02295 532ebf917491c225b1d749a6b73deae1 297 Pfam PF00892 EamA-like transporter family 154 281 5.4E-15 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS12500 2bfa50aa2f54d0303951a6437cb9bc59 120 Pfam PF04972 BON domain 51 118 3.5E-18 T 09-03-2017 IPR007055 BON domain NA29_RS12500 2bfa50aa2f54d0303951a6437cb9bc59 120 SMART SM00749 56 119 1.5E-4 T 09-03-2017 IPR014004 Transport-associated and nodulation domain, bacteria NA29_RS09310 8e114a4df54b227527fec447baea99cf 232 SUPERFAMILY SSF100950 2 227 3.63E-91 T 09-03-2017 NA29_RS09310 8e114a4df54b227527fec447baea99cf 232 Gene3D G3DSA:3.40.1080.10 2 215 1.9E-104 T 09-03-2017 NA29_RS09310 8e114a4df54b227527fec447baea99cf 232 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 09-03-2017 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 NA29_RS09310 8e114a4df54b227527fec447baea99cf 232 SMART SM00882 5 217 9.0E-96 T 09-03-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NA29_RS09310 8e114a4df54b227527fec447baea99cf 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 216 1.0E-81 T 09-03-2017 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 NA29_RS09310 8e114a4df54b227527fec447baea99cf 232 Pfam PF01144 Coenzyme A transferase 6 217 9.6E-82 T 09-03-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NA29_RS00310 cfb81fc28ae813f5ec6e863f4bdd30f8 435 Pfam PF00083 Sugar (and other) transporter 25 236 3.5E-22 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS00310 cfb81fc28ae813f5ec6e863f4bdd30f8 435 Gene3D G3DSA:1.20.1250.20 247 426 1.5E-21 T 09-03-2017 NA29_RS00310 cfb81fc28ae813f5ec6e863f4bdd30f8 435 Gene3D G3DSA:1.20.1250.20 25 225 7.4E-23 T 09-03-2017 NA29_RS00310 cfb81fc28ae813f5ec6e863f4bdd30f8 435 SUPERFAMILY SSF103473 21 426 6.8E-62 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS00310 cfb81fc28ae813f5ec6e863f4bdd30f8 435 ProSitePatterns PS00216 Sugar transport proteins signature 1. 304 321 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS00310 cfb81fc28ae813f5ec6e863f4bdd30f8 435 Pfam PF07690 Major Facilitator Superfamily 266 425 6.0E-14 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS16555 b2adef244e26ee59d8c1b4b8a63fdce9 305 SUPERFAMILY SSF103481 190 286 1.07E-6 T 09-03-2017 NA29_RS16555 b2adef244e26ee59d8c1b4b8a63fdce9 305 SUPERFAMILY SSF103481 41 147 2.35E-6 T 09-03-2017 NA29_RS16555 b2adef244e26ee59d8c1b4b8a63fdce9 305 TIGRFAM TIGR00688 rarD: protein RarD 5 259 5.4E-51 T 09-03-2017 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 NA29_RS13980 432c68a1f0c62120cc5db193be21a3ad 296 SUPERFAMILY SSF51735 4 295 3.46E-95 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13980 432c68a1f0c62120cc5db193be21a3ad 296 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 4 295 1.7E-98 T 09-03-2017 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581 NA29_RS13980 432c68a1f0c62120cc5db193be21a3ad 296 Pfam PF04321 RmlD substrate binding domain 4 295 2.4E-104 T 09-03-2017 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581 NA29_RS13980 432c68a1f0c62120cc5db193be21a3ad 296 Gene3D G3DSA:3.40.50.720 220 243 5.0E-56 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13980 432c68a1f0c62120cc5db193be21a3ad 296 Gene3D G3DSA:3.40.50.720 4 185 5.0E-56 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS05230 f8ffc6252ef20f39a9d0d873e9ac3ec4 526 PIRSF PIRSF002741 2 522 4.8E-100 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 NA29_RS05230 f8ffc6252ef20f39a9d0d873e9ac3ec4 526 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 436 2.2E-90 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain NA29_RS05230 f8ffc6252ef20f39a9d0d873e9ac3ec4 526 SUPERFAMILY SSF53850 25 507 2.35E-128 T 09-03-2017 NA29_RS05230 f8ffc6252ef20f39a9d0d873e9ac3ec4 526 Gene3D G3DSA:3.40.190.10 182 301 5.6E-37 T 09-03-2017 NA29_RS05230 f8ffc6252ef20f39a9d0d873e9ac3ec4 526 Gene3D G3DSA:3.10.105.10 302 496 1.6E-56 T 09-03-2017 NA29_RS05230 f8ffc6252ef20f39a9d0d873e9ac3ec4 526 Gene3D G3DSA:3.90.76.10 38 181 9.0E-34 T 09-03-2017 NA29_RS09465 e9ee9b9acc2052142ac72a7fe0af9f67 289 Pfam PF01614 Bacterial transcriptional regulator 160 260 2.2E-15 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS09465 e9ee9b9acc2052142ac72a7fe0af9f67 289 Gene3D G3DSA:3.30.450.40 90 262 2.8E-36 T 09-03-2017 IPR029016 GAF domain-like NA29_RS09465 e9ee9b9acc2052142ac72a7fe0af9f67 289 Gene3D G3DSA:1.10.10.10 16 89 2.4E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS09465 e9ee9b9acc2052142ac72a7fe0af9f67 289 SMART SM00346 20 111 2.0E-11 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS09465 e9ee9b9acc2052142ac72a7fe0af9f67 289 Pfam PF09339 IclR helix-turn-helix domain 23 73 5.1E-12 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS09465 e9ee9b9acc2052142ac72a7fe0af9f67 289 SUPERFAMILY SSF46785 23 92 6.55E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS09465 e9ee9b9acc2052142ac72a7fe0af9f67 289 SUPERFAMILY SSF55781 97 262 4.45E-36 T 09-03-2017 IPR029016 GAF domain-like NA29_RS18485 79e398ce34ff1f5055df3ae59e8939c2 339 SUPERFAMILY SSF53955 154 265 3.13E-21 T 09-03-2017 IPR023346 Lysozyme-like domain NA29_RS18485 79e398ce34ff1f5055df3ae59e8939c2 339 Pfam PF01464 Transglycosylase SLT domain 164 240 3.9E-16 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 NA29_RS18485 79e398ce34ff1f5055df3ae59e8939c2 339 Gene3D G3DSA:1.10.530.10 163 252 9.5E-20 T 09-03-2017 NA29_RS16415 3e03a60acaacfe155dbf8a6eebe6391e 479 Gene3D G3DSA:3.40.50.1220 303 477 9.1E-85 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS16415 3e03a60acaacfe155dbf8a6eebe6391e 479 PIRSF PIRSF000204 1 479 1.7E-210 T 09-03-2017 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 NA29_RS16415 3e03a60acaacfe155dbf8a6eebe6391e 479 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 476 2.0E-186 T 09-03-2017 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 NA29_RS16415 3e03a60acaacfe155dbf8a6eebe6391e 479 SUPERFAMILY SSF52467 307 477 1.7E-73 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS18195 704234d159e0ee330ab1b26f58de3fbe 343 SUPERFAMILY SSF50022 14 127 1.7E-28 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS18195 704234d159e0ee330ab1b26f58de3fbe 343 Gene3D G3DSA:2.102.10.10 20 131 3.2E-26 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS18195 704234d159e0ee330ab1b26f58de3fbe 343 SUPERFAMILY SSF55961 135 336 1.54E-43 T 09-03-2017 NA29_RS18195 704234d159e0ee330ab1b26f58de3fbe 343 Pfam PF00355 Rieske [2Fe-2S] domain 22 100 5.5E-17 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS17515 028f70f337f57ab5bfab0f069f89e88b 347 Gene3D G3DSA:3.40.190.10 145 287 1.8E-38 T 09-03-2017 NA29_RS17515 028f70f337f57ab5bfab0f069f89e88b 347 Pfam PF13416 Bacterial extracellular solute-binding protein 45 289 1.6E-35 T 09-03-2017 NA29_RS17515 028f70f337f57ab5bfab0f069f89e88b 347 Gene3D G3DSA:3.40.190.10 43 144 3.4E-10 T 09-03-2017 NA29_RS17515 028f70f337f57ab5bfab0f069f89e88b 347 SUPERFAMILY SSF53850 35 345 2.33E-56 T 09-03-2017 NA29_RS00150 33659963c3a0405def87b15556bf1719 235 Gene3D G3DSA:3.40.50.850 32 232 2.5E-55 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS00150 33659963c3a0405def87b15556bf1719 235 SUPERFAMILY SSF52499 32 232 2.75E-52 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS00150 33659963c3a0405def87b15556bf1719 235 Pfam PF00857 Isochorismatase family 55 228 4.2E-41 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS23810 d847c930326375a621d934b1d57eee74 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 09-03-2017 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23810 d847c930326375a621d934b1d57eee74 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 4.9E-39 T 09-03-2017 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23810 d847c930326375a621d934b1d57eee74 179 Pfam PF00281 Ribosomal protein L5 24 80 1.0E-26 T 09-03-2017 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23810 d847c930326375a621d934b1d57eee74 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.304 T 09-03-2017 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23810 d847c930326375a621d934b1d57eee74 179 Gene3D G3DSA:3.30.1440.10 1 179 8.3E-76 T 09-03-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23810 d847c930326375a621d934b1d57eee74 179 SUPERFAMILY SSF55282 3 179 5.42E-76 T 09-03-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23810 d847c930326375a621d934b1d57eee74 179 PIRSF PIRSF002161 1 179 4.3E-62 T 09-03-2017 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS19960 39066db867222d34fc5d306ac54ae198 148 SUPERFAMILY SSF51283 7 147 9.81E-52 T 09-03-2017 IPR029054 dUTPase-like NA29_RS19960 39066db867222d34fc5d306ac54ae198 148 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 147 6.2E-48 T 09-03-2017 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|Reactome: R-HSA-500753 NA29_RS19960 39066db867222d34fc5d306ac54ae198 148 Pfam PF00692 dUTPase 15 146 4.0E-38 T 09-03-2017 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 NA29_RS19960 39066db867222d34fc5d306ac54ae198 148 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 147 33.687 T 09-03-2017 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|Reactome: R-HSA-500753 NA29_RS19960 39066db867222d34fc5d306ac54ae198 148 Gene3D G3DSA:2.70.40.10 3 147 2.3E-53 T 09-03-2017 IPR029054 dUTPase-like NA29_RS24615 205089261df6e9addc5e8fc93431c337 411 Gene3D G3DSA:3.90.420.10 53 280 4.8E-70 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 NA29_RS24615 205089261df6e9addc5e8fc93431c337 411 SUPERFAMILY SSF81296 297 409 1.82E-29 T 09-03-2017 IPR014756 Immunoglobulin E-set NA29_RS24615 205089261df6e9addc5e8fc93431c337 411 Pfam PF00174 Oxidoreductase molybdopterin binding domain 96 267 3.3E-49 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 NA29_RS24615 205089261df6e9addc5e8fc93431c337 411 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 294 402 3.1E-9 T 09-03-2017 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 NA29_RS24615 205089261df6e9addc5e8fc93431c337 411 Gene3D G3DSA:2.60.40.650 298 408 5.7E-26 T 09-03-2017 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 NA29_RS24615 205089261df6e9addc5e8fc93431c337 411 SUPERFAMILY SSF56524 58 327 6.41E-72 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 NA29_RS24615 205089261df6e9addc5e8fc93431c337 411 PRINTS PR00407 Eukaryotic molybdopterin domain signature 213 229 1.4E-12 T 09-03-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 NA29_RS24615 205089261df6e9addc5e8fc93431c337 411 PRINTS PR00407 Eukaryotic molybdopterin domain signature 333 345 1.4E-12 T 09-03-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 NA29_RS24615 205089261df6e9addc5e8fc93431c337 411 PRINTS PR00407 Eukaryotic molybdopterin domain signature 378 390 1.4E-12 T 09-03-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 NA29_RS24615 205089261df6e9addc5e8fc93431c337 411 PRINTS PR00407 Eukaryotic molybdopterin domain signature 80 96 1.4E-12 T 09-03-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 NA29_RS24615 205089261df6e9addc5e8fc93431c337 411 PRINTS PR00407 Eukaryotic molybdopterin domain signature 160 175 1.4E-12 T 09-03-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 NA29_RS24615 205089261df6e9addc5e8fc93431c337 411 PRINTS PR00407 Eukaryotic molybdopterin domain signature 230 243 1.4E-12 T 09-03-2017 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 NA29_RS22080 6fb458d1e2a5e8248c75830c23490419 265 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 263 35.264 T 09-03-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS22080 6fb458d1e2a5e8248c75830c23490419 265 Gene3D G3DSA:3.40.50.720 1 133 1.9E-17 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22080 6fb458d1e2a5e8248c75830c23490419 265 PIRSF PIRSF000161 1 265 5.3E-85 T 09-03-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS22080 6fb458d1e2a5e8248c75830c23490419 265 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 123 5.9E-38 T 09-03-2017 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS22080 6fb458d1e2a5e8248c75830c23490419 265 SUPERFAMILY SSF51735 234 264 2.87E-47 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22080 6fb458d1e2a5e8248c75830c23490419 265 SUPERFAMILY SSF51735 1 124 2.87E-47 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22080 6fb458d1e2a5e8248c75830c23490419 265 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 148 165 - T 09-03-2017 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS22080 6fb458d1e2a5e8248c75830c23490419 265 SUPERFAMILY SSF55347 125 234 3.05E-38 T 09-03-2017 NA29_RS22080 6fb458d1e2a5e8248c75830c23490419 265 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 126 262 2.2E-42 T 09-03-2017 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS22080 6fb458d1e2a5e8248c75830c23490419 265 Gene3D G3DSA:3.30.360.10 134 231 1.3E-40 T 09-03-2017 NA29_RS22080 6fb458d1e2a5e8248c75830c23490419 265 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 263 5.2E-97 T 09-03-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.3E-15 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.3E-15 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.3E-15 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.3E-15 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.3E-15 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 SUPERFAMILY SSF54211 484 605 7.84E-42 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 Gene3D G3DSA:3.40.50.300 6 293 1.8E-102 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 6.2E-32 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 2.3E-66 T 09-03-2017 NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 Gene3D G3DSA:2.40.30.10 312 409 1.1E-37 T 09-03-2017 NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 SUPERFAMILY SSF52540 6 288 1.69E-105 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 Gene3D G3DSA:3.30.70.240 605 692 5.3E-35 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 SUPERFAMILY SSF50447 271 407 1.44E-34 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 Gene3D G3DSA:3.30.230.10 489 604 2.2E-48 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 Pfam PF14492 Elongation Factor G, domain II 409 482 1.4E-34 T 09-03-2017 IPR009022 Elongation factor G, III-V domain NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 Gene3D G3DSA:3.30.70.870 410 485 2.3E-38 T 09-03-2017 NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 Pfam PF03764 Elongation factor G, domain IV 484 604 2.4E-45 T 09-03-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 SMART SM00838 606 694 5.1E-58 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 699 0.0 T 09-03-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 SUPERFAMILY SSF54980 609 696 1.15E-29 T 09-03-2017 IPR009022 Elongation factor G, III-V domain NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 SUPERFAMILY SSF54980 409 486 2.81E-25 T 09-03-2017 IPR009022 Elongation factor G, III-V domain NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 109.985 T 09-03-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 Pfam PF03144 Elongation factor Tu domain 2 329 396 3.6E-18 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 Pfam PF00679 Elongation factor G C-terminus 606 692 1.9E-32 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain NA29_RS23885 f214f138e6c0766d7bdbdc56adc97c64 700 SMART SM00889 485 604 1.9E-70 T 09-03-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 Pfam PF13424 Tetratricopeptide repeat 131 196 1.6E-8 T 09-03-2017 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 Pfam PF13374 Tetratricopeptide repeat 63 92 0.018 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 Gene3D G3DSA:3.40.50.2000 588 660 2.6E-10 T 09-03-2017 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 SMART SM00028 63 96 0.0027 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 SMART SM00028 233 266 40.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 SMART SM00028 29 62 27.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 SMART SM00028 97 130 2.4 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 SMART SM00028 165 198 0.073 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 SMART SM00028 131 164 8.6E-4 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 SUPERFAMILY SSF48452 294 391 3.8E-7 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 SUPERFAMILY SSF48452 232 267 3.8E-7 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 Gene3D G3DSA:1.25.40.10 1 187 1.4E-42 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 Gene3D G3DSA:1.25.40.10 188 397 2.6E-18 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 SUPERFAMILY SSF53756 426 662 5.34E-19 T 09-03-2017 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 Pfam PF13432 Tetratricopeptide repeat 1 55 2.3E-5 T 09-03-2017 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 Pfam PF13432 Tetratricopeptide repeat 311 372 0.0073 T 09-03-2017 NA29_RS18155 f2f366b731acf460e035376d016fe179 694 SUPERFAMILY SSF48452 5 221 1.33E-37 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS19195 43ad7440d708b57705e713878ac1c659 436 ProSitePatterns PS00217 Sugar transport proteins signature 2. 128 153 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS19195 43ad7440d708b57705e713878ac1c659 436 SUPERFAMILY SSF103473 9 427 1.03E-52 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS19195 43ad7440d708b57705e713878ac1c659 436 Pfam PF07690 Major Facilitator Superfamily 57 372 3.7E-20 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS19195 43ad7440d708b57705e713878ac1c659 436 Gene3D G3DSA:1.20.1250.20 242 429 3.8E-16 T 09-03-2017 NA29_RS19195 43ad7440d708b57705e713878ac1c659 436 Gene3D G3DSA:1.20.1250.20 12 212 4.7E-18 T 09-03-2017 NA29_RS19195 43ad7440d708b57705e713878ac1c659 436 ProSitePatterns PS00216 Sugar transport proteins signature 1. 296 313 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS25235 f9a430ca2da738c39c08f951cef9af6c 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 23 39 1.4E-20 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 NA29_RS25235 f9a430ca2da738c39c08f951cef9af6c 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 78 97 1.4E-20 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 NA29_RS25235 f9a430ca2da738c39c08f951cef9af6c 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 156 177 1.4E-20 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 NA29_RS25235 f9a430ca2da738c39c08f951cef9af6c 346 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 208 218 1.4E-20 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 NA29_RS25235 f9a430ca2da738c39c08f951cef9af6c 346 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 19 28 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS25235 f9a430ca2da738c39c08f951cef9af6c 346 Pfam PF00579 tRNA synthetases class I (W and Y) 12 296 2.4E-52 T 09-03-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS25235 f9a430ca2da738c39c08f951cef9af6c 346 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 10 338 1.4E-68 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 NA29_RS25235 f9a430ca2da738c39c08f951cef9af6c 346 Gene3D G3DSA:3.40.50.620 10 223 4.3E-66 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS25235 f9a430ca2da738c39c08f951cef9af6c 346 SUPERFAMILY SSF52374 12 338 1.87E-75 T 09-03-2017 NA29_RS25235 f9a430ca2da738c39c08f951cef9af6c 346 Gene3D G3DSA:1.10.240.10 224 330 7.5E-32 T 09-03-2017 NA29_RS15860 d48a465a01ff99a48f67e6e5afed5ac7 316 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 296 4.2E-94 T 09-03-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 NA29_RS15860 d48a465a01ff99a48f67e6e5afed5ac7 316 Gene3D G3DSA:3.20.20.70 2 297 1.3E-84 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS15860 d48a465a01ff99a48f67e6e5afed5ac7 316 PIRSF PIRSF000164 1 299 1.9E-71 T 09-03-2017 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 NA29_RS15860 d48a465a01ff99a48f67e6e5afed5ac7 316 SUPERFAMILY SSF51395 2 297 1.14E-77 T 09-03-2017 NA29_RS15860 d48a465a01ff99a48f67e6e5afed5ac7 316 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 298 34.86 T 09-03-2017 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 NA29_RS15860 d48a465a01ff99a48f67e6e5afed5ac7 316 Pfam PF01180 Dihydroorotate dehydrogenase 4 280 2.0E-67 T 09-03-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 NA29_RS15860 d48a465a01ff99a48f67e6e5afed5ac7 316 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 38 57 - T 09-03-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 NA29_RS15860 d48a465a01ff99a48f67e6e5afed5ac7 316 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 236 256 - T 09-03-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 NA29_RS24250 a5b0a37f8c1e608124a6c1cbd0f04db9 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 111 1.8E-7 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS24250 a5b0a37f8c1e608124a6c1cbd0f04db9 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 44 8.1E-6 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS24250 a5b0a37f8c1e608124a6c1cbd0f04db9 186 SUPERFAMILY SSF51161 7 139 1.39E-32 T 09-03-2017 IPR011004 Trimeric LpxA-like NA29_RS24250 a5b0a37f8c1e608124a6c1cbd0f04db9 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 87 115 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 NA29_RS24250 a5b0a37f8c1e608124a6c1cbd0f04db9 186 Gene3D G3DSA:2.160.10.10 8 183 9.0E-38 T 09-03-2017 NA29_RS03675 d7aa3d55eaa8ebb348ddf8cb5763952e 859 Pfam PF00905 Penicillin binding protein transpeptidase domain 423 662 2.9E-26 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NA29_RS03675 d7aa3d55eaa8ebb348ddf8cb5763952e 859 Gene3D G3DSA:1.10.3810.10 94 270 5.9E-67 T 09-03-2017 NA29_RS03675 d7aa3d55eaa8ebb348ddf8cb5763952e 859 SUPERFAMILY SSF53955 83 293 1.27E-67 T 09-03-2017 IPR023346 Lysozyme-like domain NA29_RS03675 d7aa3d55eaa8ebb348ddf8cb5763952e 859 Gene3D G3DSA:3.40.710.10 414 725 2.3E-110 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS03675 d7aa3d55eaa8ebb348ddf8cb5763952e 859 Gene3D G3DSA:3.40.710.10 271 357 2.3E-110 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS03675 d7aa3d55eaa8ebb348ddf8cb5763952e 859 Pfam PF00912 Transglycosylase 94 269 5.3E-60 T 09-03-2017 IPR001264 Glycosyl transferase, family 51 NA29_RS03675 d7aa3d55eaa8ebb348ddf8cb5763952e 859 SUPERFAMILY SSF56601 251 273 1.33E-109 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS03675 d7aa3d55eaa8ebb348ddf8cb5763952e 859 SUPERFAMILY SSF56601 303 357 1.33E-109 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS03675 d7aa3d55eaa8ebb348ddf8cb5763952e 859 SUPERFAMILY SSF56601 416 724 1.33E-109 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS05695 bd0e02ae7ea9077d78acf1e7a6aec297 413 Gene3D G3DSA:2.40.50.100 171 206 3.7E-21 T 09-03-2017 NA29_RS05695 bd0e02ae7ea9077d78acf1e7a6aec297 413 Gene3D G3DSA:2.40.50.100 63 96 3.7E-21 T 09-03-2017 NA29_RS05695 bd0e02ae7ea9077d78acf1e7a6aec297 413 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 292 3.7E-12 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NA29_RS05695 bd0e02ae7ea9077d78acf1e7a6aec297 413 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 373 3.8E-77 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NA29_RS05695 bd0e02ae7ea9077d78acf1e7a6aec297 413 SUPERFAMILY SSF111369 49 299 4.32E-86 T 09-03-2017 NA29_RS04455 023f23cd0c3a7f36d21f9ead9038d2f1 821 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 205 304 3.4E-13 T 09-03-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 NA29_RS04455 023f23cd0c3a7f36d21f9ead9038d2f1 821 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 19 202 6.7E-48 T 09-03-2017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 NA29_RS04455 023f23cd0c3a7f36d21f9ead9038d2f1 821 SUPERFAMILY SSF48179 354 472 9.35E-17 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS04455 023f23cd0c3a7f36d21f9ead9038d2f1 821 SUPERFAMILY SSF52096 505 817 4.42E-35 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS04455 023f23cd0c3a7f36d21f9ead9038d2f1 821 SUPERFAMILY SSF48179 203 322 3.23E-21 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS04455 023f23cd0c3a7f36d21f9ead9038d2f1 821 SUPERFAMILY SSF51735 17 203 2.11E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS04455 023f23cd0c3a7f36d21f9ead9038d2f1 821 Gene3D G3DSA:1.10.1040.10 206 305 1.2E-15 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS04455 023f23cd0c3a7f36d21f9ead9038d2f1 821 Gene3D G3DSA:1.10.1040.10 370 449 1.2E-5 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS04455 023f23cd0c3a7f36d21f9ead9038d2f1 821 Gene3D G3DSA:3.40.50.720 10 205 2.1E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS04455 023f23cd0c3a7f36d21f9ead9038d2f1 821 Pfam PF00378 Enoyl-CoA hydratase/isomerase 512 648 2.9E-14 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS04455 023f23cd0c3a7f36d21f9ead9038d2f1 821 Gene3D G3DSA:3.90.226.10 506 648 3.6E-25 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS04315 c80d9317c740f0d0c1fb5abc282d640a 499 Gene3D G3DSA:2.30.40.10 415 476 2.1E-12 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS04315 c80d9317c740f0d0c1fb5abc282d640a 499 SUPERFAMILY SSF51556 72 430 8.11E-91 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS04315 c80d9317c740f0d0c1fb5abc282d640a 499 Gene3D G3DSA:3.20.20.140 86 296 2.1E-118 T 09-03-2017 NA29_RS04315 c80d9317c740f0d0c1fb5abc282d640a 499 Gene3D G3DSA:3.20.20.140 355 414 2.1E-118 T 09-03-2017 NA29_RS04315 c80d9317c740f0d0c1fb5abc282d640a 499 SUPERFAMILY SSF51338 430 492 6.49E-16 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS04315 c80d9317c740f0d0c1fb5abc282d640a 499 SUPERFAMILY SSF51338 13 71 6.49E-16 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS04315 c80d9317c740f0d0c1fb5abc282d640a 499 Gene3D G3DSA:3.30.1490.130 299 354 8.3E-30 T 09-03-2017 IPR023100 D-aminoacylase, insert domain GO:0016811 NA29_RS04315 c80d9317c740f0d0c1fb5abc282d640a 499 Gene3D G3DSA:2.30.40.10 13 85 9.6E-12 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS04315 c80d9317c740f0d0c1fb5abc282d640a 499 Pfam PF07969 Amidohydrolase family 60 286 3.6E-23 T 09-03-2017 IPR013108 Amidohydrolase 3 NA29_RS04315 c80d9317c740f0d0c1fb5abc282d640a 499 Pfam PF07969 Amidohydrolase family 345 472 8.5E-19 T 09-03-2017 IPR013108 Amidohydrolase 3 NA29_RS09855 23e0a878674b557caf1e01697b0a795c 307 Pfam PF00482 Type II secretion system (T2SS), protein F 140 266 2.1E-14 T 09-03-2017 IPR018076 Type II secretion system F domain NA29_RS05850 08a4d6d9f65f14280e17c089c7834773 512 SUPERFAMILY SSF103473 471 495 5.49E-68 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS05850 08a4d6d9f65f14280e17c089c7834773 512 SUPERFAMILY SSF103473 236 407 5.49E-68 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS05850 08a4d6d9f65f14280e17c089c7834773 512 SUPERFAMILY SSF103473 2 189 5.49E-68 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS05850 08a4d6d9f65f14280e17c089c7834773 512 Gene3D G3DSA:1.20.1250.20 3 181 1.4E-30 T 09-03-2017 NA29_RS05850 08a4d6d9f65f14280e17c089c7834773 512 Gene3D G3DSA:1.20.1250.20 471 493 1.4E-22 T 09-03-2017 NA29_RS05850 08a4d6d9f65f14280e17c089c7834773 512 Gene3D G3DSA:1.20.1250.20 248 407 1.4E-22 T 09-03-2017 NA29_RS05850 08a4d6d9f65f14280e17c089c7834773 512 Pfam PF07690 Major Facilitator Superfamily 4 397 2.5E-52 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS19190 5e491b31d9bd04b096c3191b6f5e606b 335 SUPERFAMILY SSF53850 93 301 7.24E-39 T 09-03-2017 NA29_RS19190 5e491b31d9bd04b096c3191b6f5e606b 335 Pfam PF03466 LysR substrate binding domain 100 300 1.5E-27 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS19190 5e491b31d9bd04b096c3191b6f5e606b 335 SUPERFAMILY SSF46785 6 86 1.73E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19190 5e491b31d9bd04b096c3191b6f5e606b 335 Gene3D G3DSA:3.40.190.10 277 304 1.6E-26 T 09-03-2017 NA29_RS19190 5e491b31d9bd04b096c3191b6f5e606b 335 Gene3D G3DSA:3.40.190.10 93 175 1.6E-26 T 09-03-2017 NA29_RS19190 5e491b31d9bd04b096c3191b6f5e606b 335 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 4.3E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19190 5e491b31d9bd04b096c3191b6f5e606b 335 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 4.3E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19190 5e491b31d9bd04b096c3191b6f5e606b 335 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 4.3E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19190 5e491b31d9bd04b096c3191b6f5e606b 335 Gene3D G3DSA:3.40.190.10 176 273 7.1E-19 T 09-03-2017 NA29_RS19190 5e491b31d9bd04b096c3191b6f5e606b 335 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 9.2E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19190 5e491b31d9bd04b096c3191b6f5e606b 335 Gene3D G3DSA:1.10.10.10 3 87 4.2E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05355 f01f438516ec9883cb2bf2a362524d87 166 SUPERFAMILY SSF51316 40 164 1.62E-57 T 09-03-2017 IPR011057 Mss4-like NA29_RS05355 f01f438516ec9883cb2bf2a362524d87 166 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 42 164 4.4E-51 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 NA29_RS05355 f01f438516ec9883cb2bf2a362524d87 166 Pfam PF01641 SelR domain 45 163 1.8E-51 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 NA29_RS05355 f01f438516ec9883cb2bf2a362524d87 166 Gene3D G3DSA:2.170.150.20 36 164 2.6E-58 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 NA29_RS23750 89240ec103551ab8c36532c19d8d5e74 134 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 15 131 1.0E-55 T 09-03-2017 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23750 89240ec103551ab8c36532c19d8d5e74 134 Pfam PF00411 Ribosomal protein S11 24 133 5.9E-51 T 09-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 NA29_RS23750 89240ec103551ab8c36532c19d8d5e74 134 SUPERFAMILY SSF53137 21 134 1.37E-47 T 09-03-2017 NA29_RS23750 89240ec103551ab8c36532c19d8d5e74 134 PIRSF PIRSF002131 1 134 4.4E-53 T 09-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 NA29_RS23750 89240ec103551ab8c36532c19d8d5e74 134 ProSitePatterns PS00054 Ribosomal protein S11 signature. 102 124 - T 09-03-2017 IPR018102 Ribosomal S11, conserved site NA29_RS23750 89240ec103551ab8c36532c19d8d5e74 134 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 134 33.287 T 09-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 NA29_RS23750 89240ec103551ab8c36532c19d8d5e74 134 Gene3D G3DSA:3.30.420.80 11 134 7.7E-54 T 09-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 NA29_RS14120 d73ab9c2df86bd17742212f771ead84c 360 Pfam PF04340 Protein of unknown function, DUF484 11 178 6.4E-11 T 09-03-2017 IPR007435 Protein of unknown function DUF484 NA29_RS14120 d73ab9c2df86bd17742212f771ead84c 360 Gene3D G3DSA:3.30.70.270 189 354 2.5E-52 T 09-03-2017 NA29_RS14120 d73ab9c2df86bd17742212f771ead84c 360 Pfam PF00990 Diguanylate cyclase, GGDEF domain 189 350 1.1E-41 T 09-03-2017 IPR000160 GGDEF domain NA29_RS14120 d73ab9c2df86bd17742212f771ead84c 360 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 184 354 1.4E-46 T 09-03-2017 IPR000160 GGDEF domain NA29_RS14120 d73ab9c2df86bd17742212f771ead84c 360 SMART SM00267 176 354 1.1E-53 T 09-03-2017 IPR000160 GGDEF domain NA29_RS14120 d73ab9c2df86bd17742212f771ead84c 360 SUPERFAMILY SSF55073 192 353 6.91E-44 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS14120 d73ab9c2df86bd17742212f771ead84c 360 SUPERFAMILY SSF55781 20 182 1.13E-12 T 09-03-2017 IPR029016 GAF domain-like NA29_RS14120 d73ab9c2df86bd17742212f771ead84c 360 Gene3D G3DSA:3.30.450.40 16 185 1.9E-13 T 09-03-2017 IPR029016 GAF domain-like NA29_RS10785 9eb9fc1f1cde40de9026e3a036d9c5bb 332 Gene3D G3DSA:3.20.20.100 9 325 4.9E-98 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain NA29_RS10785 9eb9fc1f1cde40de9026e3a036d9c5bb 332 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 141 158 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 NA29_RS10785 9eb9fc1f1cde40de9026e3a036d9c5bb 332 SUPERFAMILY SSF51430 2 326 7.73E-99 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain NA29_RS10785 9eb9fc1f1cde40de9026e3a036d9c5bb 332 PRINTS PR00069 Aldo-keto reductase signature 110 128 4.0E-6 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NA29_RS10785 9eb9fc1f1cde40de9026e3a036d9c5bb 332 PRINTS PR00069 Aldo-keto reductase signature 141 158 4.0E-6 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NA29_RS10785 9eb9fc1f1cde40de9026e3a036d9c5bb 332 Pfam PF00248 Aldo/keto reductase family 15 320 1.4E-69 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain NA29_RS21965 6c2d061c32c58da2ee62e451fb27261b 148 Pfam PF00301 Rubredoxin 97 143 3.0E-22 T 09-03-2017 IPR024935 Rubredoxin domain GO:0005506 NA29_RS21965 6c2d061c32c58da2ee62e451fb27261b 148 SUPERFAMILY SSF57802 96 147 3.7E-22 T 09-03-2017 NA29_RS21965 6c2d061c32c58da2ee62e451fb27261b 148 ProSitePatterns PS00202 Rubredoxin signature. 127 137 - T 09-03-2017 IPR018527 Rubredoxin, iron-binding site GO:0046872 NA29_RS21965 6c2d061c32c58da2ee62e451fb27261b 148 PRINTS PR00163 Rubredoxin signature 127 143 8.5E-9 T 09-03-2017 IPR024935 Rubredoxin domain GO:0005506 NA29_RS21965 6c2d061c32c58da2ee62e451fb27261b 148 PRINTS PR00163 Rubredoxin signature 97 113 8.5E-9 T 09-03-2017 IPR024935 Rubredoxin domain GO:0005506 NA29_RS21965 6c2d061c32c58da2ee62e451fb27261b 148 Gene3D G3DSA:2.20.28.10 96 147 6.6E-25 T 09-03-2017 IPR004039 Rubredoxin-type fold NA29_RS19130 522f588422ec7d480317287d13a393be 113 SUPERFAMILY SSF82057 42 113 1.88E-27 T 09-03-2017 NA29_RS19130 522f588422ec7d480317287d13a393be 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 112 1.9E-46 T 09-03-2017 IPR004624 PhnA protein NA29_RS19130 522f588422ec7d480317287d13a393be 113 Pfam PF08274 PhnA Zinc-Ribbon 3 32 1.1E-13 T 09-03-2017 IPR013987 PhnA protein, N-terminal NA29_RS19130 522f588422ec7d480317287d13a393be 113 Gene3D G3DSA:2.30.30.40 45 113 2.0E-35 T 09-03-2017 NA29_RS19130 522f588422ec7d480317287d13a393be 113 SUPERFAMILY SSF57783 4 36 4.17E-13 T 09-03-2017 NA29_RS19130 522f588422ec7d480317287d13a393be 113 Pfam PF03831 PhnA domain 47 113 6.0E-32 T 09-03-2017 IPR013988 PhnA protein, C-terminal NA29_RS19130 522f588422ec7d480317287d13a393be 113 Gene3D G3DSA:2.20.25.10 1 40 4.8E-20 T 09-03-2017 NA29_RS09290 86941a7c3d1cc1d1a29bfb33a28fde71 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 255 6.4E-60 T 09-03-2017 NA29_RS09290 86941a7c3d1cc1d1a29bfb33a28fde71 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS09290 86941a7c3d1cc1d1a29bfb33a28fde71 258 SUPERFAMILY SSF51735 8 256 1.1E-79 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS09290 86941a7c3d1cc1d1a29bfb33a28fde71 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 3.1E-36 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09290 86941a7c3d1cc1d1a29bfb33a28fde71 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 3.1E-36 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09290 86941a7c3d1cc1d1a29bfb33a28fde71 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 3.1E-36 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09290 86941a7c3d1cc1d1a29bfb33a28fde71 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.1E-36 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09290 86941a7c3d1cc1d1a29bfb33a28fde71 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 3.1E-36 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09290 86941a7c3d1cc1d1a29bfb33a28fde71 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 3.1E-36 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09290 86941a7c3d1cc1d1a29bfb33a28fde71 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 209 0.0062 T 09-03-2017 NA29_RS09290 86941a7c3d1cc1d1a29bfb33a28fde71 258 Gene3D G3DSA:3.40.50.720 4 256 6.7E-84 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS09290 86941a7c3d1cc1d1a29bfb33a28fde71 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 3.5E-11 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09290 86941a7c3d1cc1d1a29bfb33a28fde71 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 3.5E-11 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09290 86941a7c3d1cc1d1a29bfb33a28fde71 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 3.5E-11 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS25345 0f8405cb091f4042c74ba6b7a8b76a90 151 SUPERFAMILY SSF46785 12 149 7.52E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS25345 0f8405cb091f4042c74ba6b7a8b76a90 151 Gene3D G3DSA:1.10.10.10 6 150 2.8E-38 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS25345 0f8405cb091f4042c74ba6b7a8b76a90 151 Pfam PF01047 MarR family 43 101 4.4E-13 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS25345 0f8405cb091f4042c74ba6b7a8b76a90 151 SMART SM00347 36 136 2.0E-18 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 SUPERFAMILY SSF88697 13 204 1.14E-52 T 09-03-2017 IPR015947 PUA-like domain NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 Gene3D G3DSA:3.40.50.300 313 503 5.1E-32 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 SMART SM00464 13 205 1.9E-71 T 09-03-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 PIRSF PIRSF001174 4 778 0.0 T 09-03-2017 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 SUPERFAMILY SSF52540 315 590 5.28E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 TIGRFAM TIGR00763 lon: endopeptidase La 15 774 2.5E-299 T 09-03-2017 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 Gene3D G3DSA:3.30.230.10 594 774 6.1E-77 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 5.8E-56 T 09-03-2017 NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 725 5.8E-56 T 09-03-2017 NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 5.8E-56 T 09-03-2017 NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 598 614 5.8E-56 T 09-03-2017 NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 729 747 5.8E-56 T 09-03-2017 NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 679 687 - T 09-03-2017 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 14 203 2.3E-43 T 09-03-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 Hamap MF_01973 Lon protease [lon]. 14 775 71.819 T 09-03-2017 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 572 775 1.2E-96 T 09-03-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 SMART SM00382 350 494 5.7E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 491 9.9E-17 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 Gene3D G3DSA:1.10.8.60 504 587 2.7E-32 T 09-03-2017 NA29_RS10350 378581e6d877bfc7f1d8827511e31371 806 SUPERFAMILY SSF54211 598 773 1.97E-59 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS23870 8778373abc57c226263a564df30f1b8b 218 SUPERFAMILY SSF50447 2 213 1.5E-75 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain NA29_RS23870 8778373abc57c226263a564df30f1b8b 218 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 09-03-2017 IPR019926 Ribosomal protein L3, conserved site NA29_RS23870 8778373abc57c226263a564df30f1b8b 218 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 206 1.4E-84 T 09-03-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23870 8778373abc57c226263a564df30f1b8b 218 Pfam PF00297 Ribosomal protein L3 50 185 1.1E-13 T 09-03-2017 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23870 8778373abc57c226263a564df30f1b8b 218 Gene3D G3DSA:4.10.960.10 81 160 5.5E-27 T 09-03-2017 NA29_RS23870 8778373abc57c226263a564df30f1b8b 218 Gene3D G3DSA:2.40.30.10 161 212 2.8E-7 T 09-03-2017 NA29_RS23870 8778373abc57c226263a564df30f1b8b 218 Gene3D G3DSA:2.40.30.10 4 33 2.8E-7 T 09-03-2017 NA29_RS23870 8778373abc57c226263a564df30f1b8b 218 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 37.616 T 09-03-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS08670 781ae0b0c4bb2d6699c662b7f7a4341a 270 Pfam PF00005 ABC transporter 21 172 3.3E-24 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS08670 781ae0b0c4bb2d6699c662b7f7a4341a 270 SMART SM00382 30 222 7.0E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS08670 781ae0b0c4bb2d6699c662b7f7a4341a 270 Gene3D G3DSA:3.40.50.300 2 241 1.9E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08670 781ae0b0c4bb2d6699c662b7f7a4341a 270 SUPERFAMILY SSF52540 4 244 4.02E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS12330 5ba91847e43ee511dd15948117952ff6 676 SUPERFAMILY SSF51971 337 530 6.36E-43 T 09-03-2017 NA29_RS12330 5ba91847e43ee511dd15948117952ff6 676 Gene3D G3DSA:3.20.20.70 7 364 5.9E-123 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS12330 5ba91847e43ee511dd15948117952ff6 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 381 400 1.8E-15 T 09-03-2017 NA29_RS12330 5ba91847e43ee511dd15948117952ff6 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 463 481 1.8E-15 T 09-03-2017 NA29_RS12330 5ba91847e43ee511dd15948117952ff6 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 622 638 1.8E-15 T 09-03-2017 NA29_RS12330 5ba91847e43ee511dd15948117952ff6 676 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 503 521 1.8E-15 T 09-03-2017 NA29_RS12330 5ba91847e43ee511dd15948117952ff6 676 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 333 6.8E-89 T 09-03-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 NA29_RS12330 5ba91847e43ee511dd15948117952ff6 676 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 380 656 1.7E-28 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS12330 5ba91847e43ee511dd15948117952ff6 676 Gene3D G3DSA:3.50.50.60 365 470 2.7E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS12330 5ba91847e43ee511dd15948117952ff6 676 Gene3D G3DSA:3.50.50.60 475 629 1.2E-51 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS12330 5ba91847e43ee511dd15948117952ff6 676 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 380 402 1.7E-8 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS12330 5ba91847e43ee511dd15948117952ff6 676 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 647 666 1.7E-8 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS12330 5ba91847e43ee511dd15948117952ff6 676 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 499 523 1.7E-8 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS12330 5ba91847e43ee511dd15948117952ff6 676 SUPERFAMILY SSF51395 7 365 7.33E-112 T 09-03-2017 NA29_RS12330 5ba91847e43ee511dd15948117952ff6 676 SUPERFAMILY SSF51905 466 533 3.17E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS12330 5ba91847e43ee511dd15948117952ff6 676 SUPERFAMILY SSF51905 570 654 3.17E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 SUPERFAMILY SSF46589 887 951 8.89E-17 T 09-03-2017 IPR010978 tRNA-binding arm GO:0000166 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 SUPERFAMILY SSF52374 8 198 1.76E-132 T 09-03-2017 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 SUPERFAMILY SSF52374 347 561 1.76E-132 T 09-03-2017 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 SUPERFAMILY SSF52374 599 631 1.76E-132 T 09-03-2017 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 PRINTS PR00986 Valyl-tRNA synthetase signature 496 514 3.8E-36 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 PRINTS PR00986 Valyl-tRNA synthetase signature 352 365 3.8E-36 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 3.8E-36 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 3.8E-36 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 PRINTS PR00986 Valyl-tRNA synthetase signature 465 486 3.8E-36 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 952 15.761 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 Gene3D G3DSA:1.10.287.380 882 951 2.3E-8 T 09-03-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 Gene3D G3DSA:1.10.730.10 621 821 2.0E-61 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 Gene3D G3DSA:3.90.740.10 200 343 4.2E-52 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 887 951 2.3E-20 T 09-03-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 SUPERFAMILY SSF50677 197 348 1.1E-64 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 Pfam PF08264 Anticodon-binding domain of tRNA 672 828 4.2E-39 T 09-03-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 SUPERFAMILY SSF47323 632 902 4.11E-61 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 TIGRFAM TIGR00422 valS: valine--tRNA ligase 9 933 0.0 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 24 621 1.6E-209 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 Gene3D G3DSA:3.40.50.620 10 199 9.9E-139 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 Gene3D G3DSA:3.40.50.620 347 561 9.9E-139 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS07880 acf98d567f7cf42d8551e989823db3ec 953 Gene3D G3DSA:3.40.50.620 599 620 9.9E-139 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS06675 026a2497add593fd61fd9ff9d0ea9762 347 SUPERFAMILY SSF50331 242 345 7.14E-12 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS06675 026a2497add593fd61fd9ff9d0ea9762 347 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS06675 026a2497add593fd61fd9ff9d0ea9762 347 Gene3D G3DSA:3.40.50.300 8 240 1.7E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06675 026a2497add593fd61fd9ff9d0ea9762 347 Pfam PF00005 ABC transporter 23 166 4.1E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS06675 026a2497add593fd61fd9ff9d0ea9762 347 SUPERFAMILY SSF52540 8 246 2.0E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06675 026a2497add593fd61fd9ff9d0ea9762 347 Pfam PF08402 TOBE domain 275 343 5.1E-8 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 NA29_RS06675 026a2497add593fd61fd9ff9d0ea9762 347 SMART SM00382 32 216 2.8E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS22880 3a03b783849b45548f8ae5a17553d784 117 SUPERFAMILY SSF101386 18 116 1.63E-32 T 09-03-2017 NA29_RS22880 3a03b783849b45548f8ae5a17553d784 117 Pfam PF12643 MazG-like family 43 116 1.4E-12 T 09-03-2017 IPR025984 MazG-like domain KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 NA29_RS22880 3a03b783849b45548f8ae5a17553d784 117 PIRSF PIRSF029826 6 117 1.0E-41 T 09-03-2017 IPR011394 NTP Pyrophosphohydrolase MazG-related, RS21-C6 NA29_RS22880 3a03b783849b45548f8ae5a17553d784 117 Gene3D G3DSA:1.10.287.1080 10 105 1.9E-23 T 09-03-2017 NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF03797 Autotransporter beta-domain 1740 2006 4.5E-42 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 SUPERFAMILY SSF103515 1677 1703 3.66E-55 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 SUPERFAMILY SSF103515 1737 2022 3.66E-55 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Gene3D G3DSA:2.40.128.130 1737 2022 1.7E-59 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Gene3D G3DSA:2.40.128.130 1669 1703 1.7E-59 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 SUPERFAMILY SSF51126 3 276 5.96E-17 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF12951 Passenger-associated-transport-repeat 21 50 1.3E-5 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF12951 Passenger-associated-transport-repeat 1170 1199 1.6E-6 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF12951 Passenger-associated-transport-repeat 302 330 1.9E-9 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF12951 Passenger-associated-transport-repeat 401 429 6.7E-4 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF12951 Passenger-associated-transport-repeat 119 148 0.0013 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF12951 Passenger-associated-transport-repeat 499 527 1.8E-5 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF12951 Passenger-associated-transport-repeat 1269 1298 2.5E-7 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF12951 Passenger-associated-transport-repeat 779 808 2.8E-9 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF12951 Passenger-associated-transport-repeat 1448 1475 1.6E-5 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF12951 Passenger-associated-transport-repeat 693 719 1.0E-5 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF12951 Passenger-associated-transport-repeat 976 1004 1.6E-5 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF12951 Passenger-associated-transport-repeat 876 905 4.6E-8 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF12951 Passenger-associated-transport-repeat 1366 1384 0.062 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF12951 Passenger-associated-transport-repeat 1073 1101 1.2E-7 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF12951 Passenger-associated-transport-repeat 595 624 0.0017 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Pfam PF12951 Passenger-associated-transport-repeat 205 234 4.0E-8 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 SUPERFAMILY SSF51126 860 1224 4.71E-15 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 118 149 3.0E-6 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1268 1299 3.9E-9 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 300 330 4.5E-10 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 20 51 1.5E-7 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 204 235 1.5E-8 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 399 430 2.9E-6 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 778 809 3.3E-10 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 692 723 1.1E-6 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1071 1102 5.8E-9 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1169 1200 2.4E-7 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 974 1005 5.3E-7 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 501 527 2.5E-7 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1447 1478 3.1E-7 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 875 906 4.5E-7 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 SUPERFAMILY SSF51126 660 855 2.39E-7 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Gene3D G3DSA:2.160.20.20 751 916 1.1E-8 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Gene3D G3DSA:2.160.20.20 8 98 2.4E-4 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Gene3D G3DSA:2.160.20.20 99 272 3.5E-12 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Gene3D G3DSA:2.160.20.20 273 382 8.5E-7 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Gene3D G3DSA:2.160.20.20 473 576 3.9E-4 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Gene3D G3DSA:2.160.20.20 930 1146 1.8E-9 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Gene3D G3DSA:2.160.20.20 1147 1600 4.8E-16 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Gene3D G3DSA:2.160.20.20 383 472 1.2E-5 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 Gene3D G3DSA:2.160.20.20 577 746 5.4E-6 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 SUPERFAMILY SSF51126 1244 1603 1.26E-24 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 SUPERFAMILY SSF51126 378 676 1.35E-15 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS02895 b8576e411dece6723885dcb9cfdbfb46 2022 SMART SM00869 1741 2012 1.5E-37 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS12850 477e0b808be54262575b87097194ac56 444 SMART SM00052 188 432 4.8E-90 T 09-03-2017 IPR001633 EAL domain NA29_RS12850 477e0b808be54262575b87097194ac56 444 Gene3D G3DSA:3.30.70.270 20 167 3.3E-8 T 09-03-2017 NA29_RS12850 477e0b808be54262575b87097194ac56 444 SUPERFAMILY SSF55073 17 161 1.96E-8 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS12850 477e0b808be54262575b87097194ac56 444 Gene3D G3DSA:3.20.20.450 192 440 2.4E-85 T 09-03-2017 IPR001633 EAL domain NA29_RS12850 477e0b808be54262575b87097194ac56 444 Pfam PF00563 EAL domain 195 427 2.0E-68 T 09-03-2017 IPR001633 EAL domain NA29_RS12850 477e0b808be54262575b87097194ac56 444 SUPERFAMILY SSF141868 195 440 1.96E-78 T 09-03-2017 IPR001633 EAL domain NA29_RS12850 477e0b808be54262575b87097194ac56 444 Pfam PF00990 Diguanylate cyclase, GGDEF domain 65 151 1.2E-5 T 09-03-2017 IPR000160 GGDEF domain NA29_RS07955 78cea4046bb443f7b152cad5e48d3e11 298 Gene3D G3DSA:1.10.600.10 5 294 1.9E-88 T 09-03-2017 IPR008949 Isoprenoid synthase domain NA29_RS07955 78cea4046bb443f7b152cad5e48d3e11 298 Pfam PF00348 Polyprenyl synthetase 35 264 3.9E-51 T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 NA29_RS07955 78cea4046bb443f7b152cad5e48d3e11 298 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 85 101 - T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 NA29_RS07955 78cea4046bb443f7b152cad5e48d3e11 298 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 218 230 - T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 NA29_RS07955 78cea4046bb443f7b152cad5e48d3e11 298 SUPERFAMILY SSF48576 7 289 5.14E-80 T 09-03-2017 IPR008949 Isoprenoid synthase domain NA29_RS05120 dd24e4cbb368979515845cb52bc34645 226 SMART SM00421 146 203 4.6E-23 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS05120 dd24e4cbb368979515845cb52bc34645 226 Gene3D G3DSA:1.10.10.10 155 209 4.2E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05120 dd24e4cbb368979515845cb52bc34645 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.2E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS05120 dd24e4cbb368979515845cb52bc34645 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.2E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS05120 dd24e4cbb368979515845cb52bc34645 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.2E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS05120 dd24e4cbb368979515845cb52bc34645 226 SUPERFAMILY SSF52172 10 170 3.84E-18 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS05120 dd24e4cbb368979515845cb52bc34645 226 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 2.1E-22 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS05120 dd24e4cbb368979515845cb52bc34645 226 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS05120 dd24e4cbb368979515845cb52bc34645 226 SMART SM00448 10 122 2.0E-7 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS05120 dd24e4cbb368979515845cb52bc34645 226 Pfam PF00072 Response regulator receiver domain 23 122 2.1E-9 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS05120 dd24e4cbb368979515845cb52bc34645 226 SUPERFAMILY SSF46894 135 209 6.8E-21 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS05120 dd24e4cbb368979515845cb52bc34645 226 Gene3D G3DSA:3.40.50.2300 12 154 8.5E-17 T 09-03-2017 NA29_RS08480 6d1d66686fc4c1f4f39aaa680faa8058 361 SUPERFAMILY SSF52540 8 245 1.3E-87 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08480 6d1d66686fc4c1f4f39aaa680faa8058 361 Pfam PF08402 TOBE domain 286 356 2.6E-12 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 NA29_RS08480 6d1d66686fc4c1f4f39aaa680faa8058 361 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS08480 6d1d66686fc4c1f4f39aaa680faa8058 361 SUPERFAMILY SSF50331 241 356 2.32E-11 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS08480 6d1d66686fc4c1f4f39aaa680faa8058 361 Gene3D G3DSA:3.40.50.300 3 241 6.9E-84 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08480 6d1d66686fc4c1f4f39aaa680faa8058 361 Pfam PF00005 ABC transporter 24 165 8.6E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS08480 6d1d66686fc4c1f4f39aaa680faa8058 361 SMART SM00382 32 215 5.1E-19 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS06300 e434c98e3b3b6530f32e476a175372dd 298 Gene3D G3DSA:3.40.190.10 179 260 4.1E-7 T 09-03-2017 NA29_RS06300 e434c98e3b3b6530f32e476a175372dd 298 Gene3D G3DSA:3.40.190.10 92 178 1.4E-28 T 09-03-2017 NA29_RS06300 e434c98e3b3b6530f32e476a175372dd 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.0E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06300 e434c98e3b3b6530f32e476a175372dd 298 SUPERFAMILY SSF53850 90 295 1.32E-45 T 09-03-2017 NA29_RS06300 e434c98e3b3b6530f32e476a175372dd 298 Gene3D G3DSA:1.10.10.10 3 81 1.8E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06300 e434c98e3b3b6530f32e476a175372dd 298 SUPERFAMILY SSF46785 3 111 2.64E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06300 e434c98e3b3b6530f32e476a175372dd 298 Pfam PF03466 LysR substrate binding domain 89 293 1.8E-41 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS04800 ba63443c0f337cbc797a1d8b1cd3eb63 371 SUPERFAMILY SSF160544 247 345 4.71E-27 T 09-03-2017 IPR029025 Type III secretion system substrate exporter, C-terminal NA29_RS04800 ba63443c0f337cbc797a1d8b1cd3eb63 371 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 2 341 3.1E-99 T 09-03-2017 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 NA29_RS04800 ba63443c0f337cbc797a1d8b1cd3eb63 371 Gene3D G3DSA:3.40.1690.10 211 344 1.5E-42 T 09-03-2017 IPR029025 Type III secretion system substrate exporter, C-terminal NA29_RS04800 ba63443c0f337cbc797a1d8b1cd3eb63 371 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 4.5E-30 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS04800 ba63443c0f337cbc797a1d8b1cd3eb63 371 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 221 238 4.5E-30 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS04800 ba63443c0f337cbc797a1d8b1cd3eb63 371 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 4.5E-30 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS04800 ba63443c0f337cbc797a1d8b1cd3eb63 371 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 5 27 4.5E-30 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS04800 ba63443c0f337cbc797a1d8b1cd3eb63 371 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 201 219 4.5E-30 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS04800 ba63443c0f337cbc797a1d8b1cd3eb63 371 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 339 3.5E-97 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS08005 6113f91f56194a1e6c1e84c3aa2f8f7b 314 Gene3D G3DSA:1.10.10.10 3 86 1.1E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08005 6113f91f56194a1e6c1e84c3aa2f8f7b 314 Pfam PF03466 LysR substrate binding domain 95 292 4.3E-22 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS08005 6113f91f56194a1e6c1e84c3aa2f8f7b 314 SUPERFAMILY SSF53850 95 296 6.52E-23 T 09-03-2017 NA29_RS08005 6113f91f56194a1e6c1e84c3aa2f8f7b 314 Gene3D G3DSA:3.40.190.10 179 255 2.0E-6 T 09-03-2017 NA29_RS08005 6113f91f56194a1e6c1e84c3aa2f8f7b 314 SUPERFAMILY SSF46785 6 86 2.46E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08005 6113f91f56194a1e6c1e84c3aa2f8f7b 314 Gene3D G3DSA:3.40.190.10 97 178 1.2E-9 T 09-03-2017 NA29_RS08005 6113f91f56194a1e6c1e84c3aa2f8f7b 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 4.1E-23 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08005 6113f91f56194a1e6c1e84c3aa2f8f7b 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.2E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08005 6113f91f56194a1e6c1e84c3aa2f8f7b 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.2E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08005 6113f91f56194a1e6c1e84c3aa2f8f7b 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.2E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS12750 475fd57d954d6670756f46ccf30edb51 357 Pfam PF12727 PBP superfamily domain 141 324 1.5E-48 T 09-03-2017 IPR024370 PBP domain NA29_RS12750 475fd57d954d6670756f46ccf30edb51 357 Gene3D G3DSA:1.10.10.10 1 127 1.5E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12750 475fd57d954d6670756f46ccf30edb51 357 SUPERFAMILY SSF53850 126 347 2.01E-13 T 09-03-2017 NA29_RS12750 475fd57d954d6670756f46ccf30edb51 357 Gene3D G3DSA:3.40.190.10 202 327 2.4E-10 T 09-03-2017 NA29_RS12750 475fd57d954d6670756f46ccf30edb51 357 SUPERFAMILY SSF46785 7 136 9.52E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12750 475fd57d954d6670756f46ccf30edb51 357 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 82 2.4E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS02340 8ff2231b35762dcaef8eb423b1ea3e86 666 Gene3D G3DSA:3.30.565.10 489 658 8.1E-34 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS02340 8ff2231b35762dcaef8eb423b1ea3e86 666 SMART SM00387 545 659 1.9E-27 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS02340 8ff2231b35762dcaef8eb423b1ea3e86 666 SMART SM00388 435 503 7.2E-6 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS02340 8ff2231b35762dcaef8eb423b1ea3e86 666 SUPERFAMILY SSF103190 97 230 6.67E-15 T 09-03-2017 IPR029151 Periplasmic sensor domain-like NA29_RS02340 8ff2231b35762dcaef8eb423b1ea3e86 666 Pfam PF02743 Cache domain 86 331 1.1E-17 T 09-03-2017 IPR033479 Double Cache domain 1 NA29_RS02340 8ff2231b35762dcaef8eb423b1ea3e86 666 SUPERFAMILY SSF47384 418 498 5.89E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS02340 8ff2231b35762dcaef8eb423b1ea3e86 666 Gene3D G3DSA:1.10.287.130 435 488 2.2E-6 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS02340 8ff2231b35762dcaef8eb423b1ea3e86 666 Gene3D G3DSA:3.30.450.20 134 224 2.1E-6 T 09-03-2017 NA29_RS02340 8ff2231b35762dcaef8eb423b1ea3e86 666 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 616 2.4E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS02340 8ff2231b35762dcaef8eb423b1ea3e86 666 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 602 2.4E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS02340 8ff2231b35762dcaef8eb423b1ea3e86 666 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 637 2.4E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS02340 8ff2231b35762dcaef8eb423b1ea3e86 666 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 656 2.4E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS02340 8ff2231b35762dcaef8eb423b1ea3e86 666 Pfam PF00512 His Kinase A (phospho-acceptor) domain 435 498 1.9E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS02340 8ff2231b35762dcaef8eb423b1ea3e86 666 PIRSF PIRSF036431 36 666 1.0E-219 T 09-03-2017 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) NA29_RS02340 8ff2231b35762dcaef8eb423b1ea3e86 666 SUPERFAMILY SSF55874 493 656 8.77E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS02340 8ff2231b35762dcaef8eb423b1ea3e86 666 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 548 656 1.3E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS05360 79df7dd722b834c4c76d17c273db3776 250 Gene3D G3DSA:3.40.50.2300 2 123 7.6E-39 T 09-03-2017 NA29_RS05360 79df7dd722b834c4c76d17c273db3776 250 SMART SM00862 155 231 4.5E-29 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS05360 79df7dd722b834c4c76d17c273db3776 250 SUPERFAMILY SSF52172 3 129 5.27E-39 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS05360 79df7dd722b834c4c76d17c273db3776 250 SMART SM00448 5 116 1.5E-38 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS05360 79df7dd722b834c4c76d17c273db3776 250 Pfam PF00072 Response regulator receiver domain 7 116 1.3E-23 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS05360 79df7dd722b834c4c76d17c273db3776 250 Gene3D G3DSA:1.10.10.10 136 233 4.5E-35 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05360 79df7dd722b834c4c76d17c273db3776 250 SUPERFAMILY SSF46894 128 232 5.72E-31 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS05360 79df7dd722b834c4c76d17c273db3776 250 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 1.8E-26 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS21425 1f8b3039bcc6f794d43526ffa9521c04 258 Pfam PF02525 Flavodoxin-like fold 1 203 2.7E-55 T 09-03-2017 IPR003680 Flavodoxin-like fold NA29_RS21425 1f8b3039bcc6f794d43526ffa9521c04 258 SUPERFAMILY SSF52218 1 243 1.15E-71 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS21425 1f8b3039bcc6f794d43526ffa9521c04 258 Gene3D G3DSA:3.40.50.360 1 234 1.9E-73 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS16865 a594d52c592ed8769a078d31d478fb11 254 SUPERFAMILY SSF53448 1 238 1.51E-26 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS16865 a594d52c592ed8769a078d31d478fb11 254 Pfam PF12804 MobA-like NTP transferase domain 3 124 1.5E-14 T 09-03-2017 IPR025877 MobA-like NTP transferase NA29_RS16865 a594d52c592ed8769a078d31d478fb11 254 Gene3D G3DSA:3.90.550.10 1 241 2.4E-24 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS15225 50cfb2c38042eb937fab31569d53a406 1003 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 374 501 2.1E-13 T 09-03-2017 IPR004477 ComEC/Rec2-related protein NA29_RS15225 50cfb2c38042eb937fab31569d53a406 1003 Pfam PF13567 Domain of unknown function (DUF4131) 248 299 7.2E-7 T 09-03-2017 IPR025405 Domain of unknown function DUF4131 NA29_RS15225 50cfb2c38042eb937fab31569d53a406 1003 Pfam PF13567 Domain of unknown function (DUF4131) 9 160 1.9E-8 T 09-03-2017 IPR025405 Domain of unknown function DUF4131 NA29_RS15225 50cfb2c38042eb937fab31569d53a406 1003 Pfam PF03772 Competence protein 353 697 1.6E-57 T 09-03-2017 IPR004477 ComEC/Rec2-related protein NA29_RS15225 50cfb2c38042eb937fab31569d53a406 1003 SMART SM00849 744 935 2.7E-14 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS15225 50cfb2c38042eb937fab31569d53a406 1003 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 591 964 1.6E-58 T 09-03-2017 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 NA29_RS15225 50cfb2c38042eb937fab31569d53a406 1003 Gene3D G3DSA:3.60.15.10 731 959 4.0E-33 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS15225 50cfb2c38042eb937fab31569d53a406 1003 Pfam PF00753 Metallo-beta-lactamase superfamily 743 994 3.4E-13 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS15225 50cfb2c38042eb937fab31569d53a406 1003 SUPERFAMILY SSF56281 733 995 8.65E-47 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS06790 8d49872cace67a3b1ead5e8e0010f736 490 SUPERFAMILY SSF55447 369 477 4.58E-36 T 09-03-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal NA29_RS06790 8d49872cace67a3b1ead5e8e0010f736 490 Gene3D G3DSA:1.10.150.120 88 180 8.3E-36 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS06790 8d49872cace67a3b1ead5e8e0010f736 490 PIRSF PIRSF036557 3 486 8.7E-218 T 09-03-2017 IPR012175 Xanthine dehydrogenase, small subunit, bacteria NA29_RS06790 8d49872cace67a3b1ead5e8e0010f736 490 Pfam PF01799 [2Fe-2S] binding domain 86 163 1.7E-29 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS06790 8d49872cace67a3b1ead5e8e0010f736 490 SUPERFAMILY SSF47741 98 209 1.7E-33 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS06790 8d49872cace67a3b1ead5e8e0010f736 490 Gene3D G3DSA:3.30.390.50 373 473 3.7E-39 T 09-03-2017 NA29_RS06790 8d49872cace67a3b1ead5e8e0010f736 490 SUPERFAMILY SSF54292 5 90 8.18E-16 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS06790 8d49872cace67a3b1ead5e8e0010f736 490 SUPERFAMILY SSF56176 186 364 5.18E-53 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS06790 8d49872cace67a3b1ead5e8e0010f736 490 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 201 364 5.2E-47 T 09-03-2017 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 NA29_RS06790 8d49872cace67a3b1ead5e8e0010f736 490 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 372 472 2.2E-32 T 09-03-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal NA29_RS06790 8d49872cace67a3b1ead5e8e0010f736 490 SMART SM01092 372 473 4.9E-37 T 09-03-2017 IPR005107 CO dehydrogenase flavoprotein, C-terminal NA29_RS06790 8d49872cace67a3b1ead5e8e0010f736 490 Gene3D G3DSA:3.30.465.10 251 364 3.2E-33 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS06790 8d49872cace67a3b1ead5e8e0010f736 490 Gene3D G3DSA:3.10.20.30 3 87 1.4E-24 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS06790 8d49872cace67a3b1ead5e8e0010f736 490 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 6 473 9.5E-209 T 09-03-2017 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259 NA29_RS06790 8d49872cace67a3b1ead5e8e0010f736 490 Gene3D G3DSA:3.30.43.10 202 250 2.5E-25 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NA29_RS06790 8d49872cace67a3b1ead5e8e0010f736 490 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 43 51 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NA29_RS03305 b26f004e62b1bc9b86e4dd749b344837 447 Pfam PF07690 Major Facilitator Superfamily 29 396 7.6E-47 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS03305 b26f004e62b1bc9b86e4dd749b344837 447 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS03305 b26f004e62b1bc9b86e4dd749b344837 447 Gene3D G3DSA:1.20.1250.20 246 435 4.2E-26 T 09-03-2017 NA29_RS03305 b26f004e62b1bc9b86e4dd749b344837 447 Gene3D G3DSA:1.20.1250.20 18 203 3.7E-37 T 09-03-2017 NA29_RS03305 b26f004e62b1bc9b86e4dd749b344837 447 SUPERFAMILY SSF103473 12 437 4.58E-81 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS20775 2392b73a3b53bd50e520ce21f2c549c1 110 Gene3D G3DSA:3.30.70.900 13 87 2.5E-5 T 09-03-2017 NA29_RS20775 2392b73a3b53bd50e520ce21f2c549c1 110 SUPERFAMILY SSF54909 2 97 3.58E-19 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS16480 f7b702a0b040f2cdda66648d0279c032 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 64 80 6.9E-6 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16480 f7b702a0b040f2cdda66648d0279c032 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 64 6.9E-6 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16480 f7b702a0b040f2cdda66648d0279c032 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 90 1.0E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16480 f7b702a0b040f2cdda66648d0279c032 237 Pfam PF07729 FCD domain 100 221 1.0E-25 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS16480 f7b702a0b040f2cdda66648d0279c032 237 SMART SM00345 29 90 2.2E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16480 f7b702a0b040f2cdda66648d0279c032 237 SUPERFAMILY SSF46785 22 94 1.34E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16480 f7b702a0b040f2cdda66648d0279c032 237 Gene3D G3DSA:1.20.120.530 95 231 1.5E-26 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS16480 f7b702a0b040f2cdda66648d0279c032 237 SUPERFAMILY SSF48008 96 230 1.65E-25 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS16480 f7b702a0b040f2cdda66648d0279c032 237 Gene3D G3DSA:1.10.10.10 17 90 2.9E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16480 f7b702a0b040f2cdda66648d0279c032 237 SMART SM00895 100 224 5.4E-20 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS16700 f8544d5fa20d901ec3e024a54625cd4d 310 SUPERFAMILY SSF52467 189 309 3.38E-47 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS16700 f8544d5fa20d901ec3e024a54625cd4d 310 SMART SM00893 3 182 4.8E-58 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 NA29_RS16700 f8544d5fa20d901ec3e024a54625cd4d 310 Pfam PF01012 Electron transfer flavoprotein domain 4 170 1.9E-39 T 09-03-2017 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 NA29_RS16700 f8544d5fa20d901ec3e024a54625cd4d 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 2.0E-35 T 09-03-2017 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 NA29_RS16700 f8544d5fa20d901ec3e024a54625cd4d 310 PIRSF PIRSF000089 1 310 3.3E-107 T 09-03-2017 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 NA29_RS16700 f8544d5fa20d901ec3e024a54625cd4d 310 SUPERFAMILY SSF52402 2 185 1.05E-58 T 09-03-2017 NA29_RS16700 f8544d5fa20d901ec3e024a54625cd4d 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 09-03-2017 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 NA29_RS16700 f8544d5fa20d901ec3e024a54625cd4d 310 Gene3D G3DSA:3.40.50.620 1 182 3.6E-65 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS16700 f8544d5fa20d901ec3e024a54625cd4d 310 Gene3D G3DSA:3.40.50.1220 185 310 5.0E-61 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS07445 3fa0946525e3a78453ef0cc6da1559b5 843 Gene3D G3DSA:1.10.760.10 733 821 3.6E-13 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS07445 3fa0946525e3a78453ef0cc6da1559b5 843 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 735 816 4.0E-10 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS07445 3fa0946525e3a78453ef0cc6da1559b5 843 Pfam PF00034 Cytochrome c 458 557 7.6E-9 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS07445 3fa0946525e3a78453ef0cc6da1559b5 843 SUPERFAMILY SSF46626 453 579 2.94E-23 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS07445 3fa0946525e3a78453ef0cc6da1559b5 843 SUPERFAMILY SSF56003 77 391 1.09E-27 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS07445 3fa0946525e3a78453ef0cc6da1559b5 843 Gene3D G3DSA:1.10.760.10 600 706 2.6E-7 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS07445 3fa0946525e3a78453ef0cc6da1559b5 843 Gene3D G3DSA:1.10.760.10 455 557 4.7E-15 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS07445 3fa0946525e3a78453ef0cc6da1559b5 843 Gene3D G3DSA:3.30.365.10 221 391 9.3E-15 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS07445 3fa0946525e3a78453ef0cc6da1559b5 843 Gene3D G3DSA:3.30.365.10 80 180 1.3E-5 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS07445 3fa0946525e3a78453ef0cc6da1559b5 843 SUPERFAMILY SSF46626 733 826 1.43E-15 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS07445 3fa0946525e3a78453ef0cc6da1559b5 843 SUPERFAMILY SSF46626 585 711 5.05E-14 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS00415 88464578d55d551123c093eeb8022d01 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00415 88464578d55d551123c093eeb8022d01 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00415 88464578d55d551123c093eeb8022d01 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00415 88464578d55d551123c093eeb8022d01 299 SUPERFAMILY SSF46785 5 113 1.04E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00415 88464578d55d551123c093eeb8022d01 299 Gene3D G3DSA:3.40.190.10 207 256 8.7E-7 T 09-03-2017 NA29_RS00415 88464578d55d551123c093eeb8022d01 299 SUPERFAMILY SSF53850 85 298 1.23E-17 T 09-03-2017 NA29_RS00415 88464578d55d551123c093eeb8022d01 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 4.3E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00415 88464578d55d551123c093eeb8022d01 299 Gene3D G3DSA:3.40.190.10 91 206 3.0E-10 T 09-03-2017 NA29_RS00415 88464578d55d551123c093eeb8022d01 299 Pfam PF03466 LysR substrate binding domain 92 257 4.8E-17 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS00415 88464578d55d551123c093eeb8022d01 299 Gene3D G3DSA:1.10.10.10 6 88 8.0E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08675 383d0dfc9121e4d0a13353faeffd4a47 412 Gene3D G3DSA:3.30.300.30 314 404 4.9E-9 T 09-03-2017 NA29_RS08675 383d0dfc9121e4d0a13353faeffd4a47 412 Gene3D G3DSA:3.40.50.980 116 237 2.1E-8 T 09-03-2017 NA29_RS08675 383d0dfc9121e4d0a13353faeffd4a47 412 Pfam PF00501 AMP-binding enzyme 119 276 2.0E-14 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS08675 383d0dfc9121e4d0a13353faeffd4a47 412 SUPERFAMILY SSF56801 111 349 3.66E-31 T 09-03-2017 NA29_RS19665 57cfa4594234acd895381964ba56b073 97 Pfam PF00816 H-NS histone family 6 88 8.5E-24 T 09-03-2017 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 NA29_RS19665 57cfa4594234acd895381964ba56b073 97 SMART SM00528 57 95 2.7E-10 T 09-03-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 NA29_RS19665 57cfa4594234acd895381964ba56b073 97 Gene3D G3DSA:4.10.430.10 61 95 1.9E-6 T 09-03-2017 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 NA29_RS19665 57cfa4594234acd895381964ba56b073 97 SUPERFAMILY SSF81273 60 95 1.26E-9 T 09-03-2017 NA29_RS09925 c0970cc6d39723bb28fd06a2a2a948d4 386 Gene3D G3DSA:3.10.290.10 73 123 4.1E-10 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS09925 c0970cc6d39723bb28fd06a2a2a948d4 386 Pfam PF00849 RNA pseudouridylate synthase 149 305 5.6E-31 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS09925 c0970cc6d39723bb28fd06a2a2a948d4 386 SUPERFAMILY SSF55174 74 124 6.73E-9 T 09-03-2017 NA29_RS09925 c0970cc6d39723bb28fd06a2a2a948d4 386 Pfam PF01479 S4 domain 74 119 7.6E-8 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS09925 c0970cc6d39723bb28fd06a2a2a948d4 386 SMART SM00363 74 139 6.0E-5 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS09925 c0970cc6d39723bb28fd06a2a2a948d4 386 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 192 206 - T 09-03-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS09925 c0970cc6d39723bb28fd06a2a2a948d4 386 SUPERFAMILY SSF55120 134 371 6.17E-70 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS09925 c0970cc6d39723bb28fd06a2a2a948d4 386 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 72 367 1.0E-84 T 09-03-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS00545 da52fd48be02dd94ff4bba427ac16ccd 394 PIRSF PIRSF000429 1 394 2.2E-117 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS00545 da52fd48be02dd94ff4bba427ac16ccd 394 SUPERFAMILY SSF53901 4 270 1.58E-71 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS00545 da52fd48be02dd94ff4bba427ac16ccd 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 392 1.2E-127 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS00545 da52fd48be02dd94ff4bba427ac16ccd 394 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 09-03-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 NA29_RS00545 da52fd48be02dd94ff4bba427ac16ccd 394 Pfam PF00108 Thiolase, N-terminal domain 5 262 8.7E-74 T 09-03-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 NA29_RS00545 da52fd48be02dd94ff4bba427ac16ccd 394 Pfam PF02803 Thiolase, C-terminal domain 272 393 1.6E-41 T 09-03-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 NA29_RS00545 da52fd48be02dd94ff4bba427ac16ccd 394 SUPERFAMILY SSF53901 272 393 4.74E-41 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS00545 da52fd48be02dd94ff4bba427ac16ccd 394 Gene3D G3DSA:3.40.47.10 4 125 2.9E-57 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS00545 da52fd48be02dd94ff4bba427ac16ccd 394 Gene3D G3DSA:3.40.47.10 195 276 2.9E-57 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS00545 da52fd48be02dd94ff4bba427ac16ccd 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 09-03-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 NA29_RS00545 da52fd48be02dd94ff4bba427ac16ccd 394 Gene3D G3DSA:3.40.47.10 145 194 1.7E-57 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS00545 da52fd48be02dd94ff4bba427ac16ccd 394 Gene3D G3DSA:3.40.47.10 278 393 1.7E-57 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS00295 a1f46929b6836bd96db713cd0661cf7a 283 Pfam PF02673 Bacitracin resistance protein BacA 7 274 8.0E-52 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 NA29_RS00295 a1f46929b6836bd96db713cd0661cf7a 283 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 280 13.061 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 NA29_RS03720 2d73126cf4fa564a1dee78de6bee305b 357 Gene3D G3DSA:3.10.180.10 157 356 4.8E-63 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS03720 2d73126cf4fa564a1dee78de6bee305b 357 Gene3D G3DSA:3.10.180.10 5 147 2.8E-45 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS03720 2d73126cf4fa564a1dee78de6bee305b 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 355 5.0E-118 T 09-03-2017 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 NA29_RS03720 2d73126cf4fa564a1dee78de6bee305b 357 SUPERFAMILY SSF54593 5 342 3.7E-84 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS03720 2d73126cf4fa564a1dee78de6bee305b 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 5 143 8.0E-70 T 09-03-2017 NA29_RS03720 2d73126cf4fa564a1dee78de6bee305b 357 PIRSF PIRSF009283 1 356 5.5E-110 T 09-03-2017 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 NA29_RS03720 2d73126cf4fa564a1dee78de6bee305b 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 160 277 2.3E-15 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 Gene3D G3DSA:1.10.220.30 73 184 2.9E-32 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 Gene3D G3DSA:1.10.220.30 194 331 1.8E-40 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 SUPERFAMILY SSF48029 114 324 1.44E-65 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 PIRSF PIRSF003161 1 332 1.3E-115 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 Pfam PF14841 FliG middle domain 116 187 1.6E-26 T 09-03-2017 IPR032779 Flagellar motor switch protein FliG, middle domain NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 331 6.4E-115 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 Pfam PF01706 FliG C-terminal domain 217 323 2.5E-38 T 09-03-2017 IPR023087 Flagellar motor switch protein FliG, C-terminal NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 Pfam PF14842 FliG N-terminal domain 6 104 9.7E-32 T 09-03-2017 IPR028263 Flagellar motor switch protein FliG, N-terminal domain NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 1.3E-65 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 4 20 1.3E-65 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 225 245 1.3E-65 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 247 267 1.3E-65 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 271 297 1.3E-65 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 33 59 1.3E-65 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 194 219 1.3E-65 T 09-03-2017 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 Gene3D G3DSA:1.10.220.30 4 71 2.4E-17 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical NA29_RS24815 b48264e0597a8538c86fab7e87cb2098 332 SUPERFAMILY SSF48029 4 122 1.26E-24 T 09-03-2017 IPR011002 Flagellar motor switch protein FliG, alpha-helical NA29_RS16135 668eeaae15f6df0c42bcc4efea3926b2 411 Pfam PF13609 Gram-negative porin 14 369 1.0E-44 T 09-03-2017 NA29_RS16135 668eeaae15f6df0c42bcc4efea3926b2 411 SUPERFAMILY SSF56935 28 234 5.19E-83 T 09-03-2017 NA29_RS16135 668eeaae15f6df0c42bcc4efea3926b2 411 SUPERFAMILY SSF56935 261 411 5.19E-83 T 09-03-2017 NA29_RS16135 668eeaae15f6df0c42bcc4efea3926b2 411 Gene3D G3DSA:2.40.160.10 28 411 1.7E-94 T 09-03-2017 IPR023614 Porin domain NA29_RS16135 668eeaae15f6df0c42bcc4efea3926b2 411 PRINTS PR00184 Neisseria sp. porin signature 342 366 4.3E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS16135 668eeaae15f6df0c42bcc4efea3926b2 411 PRINTS PR00184 Neisseria sp. porin signature 176 193 4.3E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS16135 668eeaae15f6df0c42bcc4efea3926b2 411 PRINTS PR00184 Neisseria sp. porin signature 75 100 4.3E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS21655 f6db46d62f358c36e29472145dba083a 146 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 13 141 2.6E-31 T 09-03-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 NA29_RS21655 f6db46d62f358c36e29472145dba083a 146 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 10 144 22.801 T 09-03-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 NA29_RS21655 f6db46d62f358c36e29472145dba083a 146 SUPERFAMILY SSF53098 11 142 1.67E-36 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS21655 f6db46d62f358c36e29472145dba083a 146 Gene3D G3DSA:3.30.420.140 10 143 8.4E-43 T 09-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 NA29_RS21655 f6db46d62f358c36e29472145dba083a 146 Pfam PF03652 Holliday junction resolvase 11 142 4.1E-38 T 09-03-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 NA29_RS21655 f6db46d62f358c36e29472145dba083a 146 SMART SM00732 10 110 5.3E-29 T 09-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 NA29_RS18525 01feddfd0f88430ceb252d01a2ced66f 140 Pfam PF00072 Response regulator receiver domain 18 130 1.4E-17 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS18525 01feddfd0f88430ceb252d01a2ced66f 140 Gene3D G3DSA:3.40.50.2300 14 138 1.7E-23 T 09-03-2017 NA29_RS18525 01feddfd0f88430ceb252d01a2ced66f 140 SMART SM00448 16 131 1.7E-17 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS18525 01feddfd0f88430ceb252d01a2ced66f 140 SUPERFAMILY SSF52172 15 136 2.56E-24 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS17365 28ea23373b75a3c6d0827b72c6918f9a 341 Gene3D G3DSA:3.40.830.10 1 26 5.4E-70 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS17365 28ea23373b75a3c6d0827b72c6918f9a 341 Gene3D G3DSA:3.40.830.10 69 337 5.4E-70 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS17365 28ea23373b75a3c6d0827b72c6918f9a 341 SUPERFAMILY SSF53213 69 322 7.98E-47 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS17365 28ea23373b75a3c6d0827b72c6918f9a 341 SUPERFAMILY SSF53213 2 26 7.98E-47 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS17365 28ea23373b75a3c6d0827b72c6918f9a 341 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 75 319 2.0E-15 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS24930 47d18c1c75f1013578392a7dc526d3d4 352 SMART SM00858 224 286 2.0E-8 T 09-03-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 NA29_RS24930 47d18c1c75f1013578392a7dc526d3d4 352 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 212 343 7.4E-36 T 09-03-2017 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal NA29_RS24930 47d18c1c75f1013578392a7dc526d3d4 352 Pfam PF13144 Chaperone for flagella basal body P-ring formation 149 342 1.1E-47 T 09-03-2017 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal NA29_RS12300 2b8d08abbfe3d3a761be649c375bca3c 484 Pfam PF13487 HD domain 295 357 1.6E-12 T 09-03-2017 NA29_RS12300 2b8d08abbfe3d3a761be649c375bca3c 484 SUPERFAMILY SSF109604 245 402 7.22E-9 T 09-03-2017 NA29_RS12300 2b8d08abbfe3d3a761be649c375bca3c 484 SMART SM00421 421 478 2.2E-20 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS12300 2b8d08abbfe3d3a761be649c375bca3c 484 SUPERFAMILY SSF46894 413 484 9.52E-19 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS12300 2b8d08abbfe3d3a761be649c375bca3c 484 Gene3D G3DSA:1.10.10.10 411 483 1.4E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12300 2b8d08abbfe3d3a761be649c375bca3c 484 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 424 438 1.4E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS12300 2b8d08abbfe3d3a761be649c375bca3c 484 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 454 466 1.4E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS12300 2b8d08abbfe3d3a761be649c375bca3c 484 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 438 454 1.4E-11 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS12300 2b8d08abbfe3d3a761be649c375bca3c 484 Pfam PF00196 Bacterial regulatory proteins, luxR family 423 477 1.5E-16 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS03310 38bf0d68afce96dd10a583f39402f696 405 Pfam PF01494 FAD binding domain 9 324 1.3E-27 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 NA29_RS03310 38bf0d68afce96dd10a583f39402f696 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 5.2E-16 T 09-03-2017 NA29_RS03310 38bf0d68afce96dd10a583f39402f696 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 5.2E-16 T 09-03-2017 NA29_RS03310 38bf0d68afce96dd10a583f39402f696 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 5.2E-16 T 09-03-2017 NA29_RS03310 38bf0d68afce96dd10a583f39402f696 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 5.2E-16 T 09-03-2017 NA29_RS03310 38bf0d68afce96dd10a583f39402f696 405 SUPERFAMILY SSF51905 8 177 1.88E-57 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03310 38bf0d68afce96dd10a583f39402f696 405 SUPERFAMILY SSF51905 274 364 1.88E-57 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03310 38bf0d68afce96dd10a583f39402f696 405 SUPERFAMILY SSF54373 181 280 1.61E-13 T 09-03-2017 NA29_RS03310 38bf0d68afce96dd10a583f39402f696 405 Gene3D G3DSA:3.50.50.60 8 182 4.0E-39 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03310 38bf0d68afce96dd10a583f39402f696 405 Gene3D G3DSA:3.50.50.60 274 358 4.0E-39 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS13805 05dc696f32251cd61814982456d44d22 1388 SMART SM00847 512 602 4.5E-34 T 09-03-2017 IPR007502 Helicase-associated domain GO:0004386 NA29_RS13805 05dc696f32251cd61814982456d44d22 1388 SUPERFAMILY SSF52540 694 728 1.0E-96 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13805 05dc696f32251cd61814982456d44d22 1388 SUPERFAMILY SSF52540 95 610 1.0E-96 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13805 05dc696f32251cd61814982456d44d22 1388 Gene3D G3DSA:3.40.50.300 98 259 2.6E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13805 05dc696f32251cd61814982456d44d22 1388 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 76 1056 0.0 T 09-03-2017 IPR010222 RNA helicase HrpA GO:0004004 NA29_RS13805 05dc696f32251cd61814982456d44d22 1388 SMART SM00382 113 418 3.6E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS13805 05dc696f32251cd61814982456d44d22 1388 SMART SM00487 96 292 1.0E-25 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain NA29_RS13805 05dc696f32251cd61814982456d44d22 1388 Pfam PF00270 DEAD/DEAH box helicase 106 258 8.9E-6 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NA29_RS13805 05dc696f32251cd61814982456d44d22 1388 Pfam PF11898 Domain of unknown function (DUF3418) 756 1384 3.6E-223 T 09-03-2017 IPR024590 RNA helicase HrpA, C-terminal NA29_RS13805 05dc696f32251cd61814982456d44d22 1388 Pfam PF04408 Helicase associated domain (HA2) 515 589 5.9E-18 T 09-03-2017 IPR007502 Helicase-associated domain GO:0004386 NA29_RS13805 05dc696f32251cd61814982456d44d22 1388 Pfam PF00271 Helicase conserved C-terminal domain 334 451 1.6E-9 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS13805 05dc696f32251cd61814982456d44d22 1388 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 652 742 3.8E-15 T 09-03-2017 IPR011709 Domain of unknown function DUF1605 NA29_RS13805 05dc696f32251cd61814982456d44d22 1388 Gene3D G3DSA:3.40.50.300 326 466 5.7E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13805 05dc696f32251cd61814982456d44d22 1388 SMART SM00490 352 452 3.1E-13 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS24830 472eb2e23d8839e688c8dbb4bee09db7 150 Pfam PF02050 Flagellar FliJ protein 19 141 3.2E-31 T 09-03-2017 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 NA29_RS24830 472eb2e23d8839e688c8dbb4bee09db7 150 Gene3D G3DSA:3.30.500.10 27 115 3.8E-4 T 09-03-2017 IPR011161 MHC class I-like antigen recognition-like GO:0006955 Reactome: R-HSA-1236974|Reactome: R-HSA-1236977|Reactome: R-HSA-198933|Reactome: R-HSA-877300|Reactome: R-HSA-909733|Reactome: R-HSA-983170 NA29_RS24830 472eb2e23d8839e688c8dbb4bee09db7 150 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 144 5.0E-27 T 09-03-2017 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 NA29_RS24830 472eb2e23d8839e688c8dbb4bee09db7 150 PRINTS PR01004 Flagellar FliJ protein signature 63 84 9.9E-17 T 09-03-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 NA29_RS24830 472eb2e23d8839e688c8dbb4bee09db7 150 PRINTS PR01004 Flagellar FliJ protein signature 126 146 9.9E-17 T 09-03-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 NA29_RS24830 472eb2e23d8839e688c8dbb4bee09db7 150 PRINTS PR01004 Flagellar FliJ protein signature 86 107 9.9E-17 T 09-03-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 NA29_RS24830 472eb2e23d8839e688c8dbb4bee09db7 150 PRINTS PR01004 Flagellar FliJ protein signature 4 26 9.9E-17 T 09-03-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 NA29_RS24830 472eb2e23d8839e688c8dbb4bee09db7 150 PRINTS PR01004 Flagellar FliJ protein signature 44 61 9.9E-17 T 09-03-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 NA29_RS24830 472eb2e23d8839e688c8dbb4bee09db7 150 PIRSF PIRSF019404 1 148 9.1E-48 T 09-03-2017 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 NA29_RS17335 56dc26a8ac1ae5c712afb8ebecdcad28 436 SUPERFAMILY SSF50022 18 144 1.79E-29 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS17335 56dc26a8ac1ae5c712afb8ebecdcad28 436 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 68 90 - T 09-03-2017 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 NA29_RS17335 56dc26a8ac1ae5c712afb8ebecdcad28 436 Gene3D G3DSA:2.102.10.10 24 144 1.4E-29 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS17335 56dc26a8ac1ae5c712afb8ebecdcad28 436 SUPERFAMILY SSF55961 130 359 7.42E-28 T 09-03-2017 NA29_RS17335 56dc26a8ac1ae5c712afb8ebecdcad28 436 Pfam PF00355 Rieske [2Fe-2S] domain 27 107 1.5E-15 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS22010 8d28a4894ebeb7fc7ca4b1cc24797732 434 SUPERFAMILY SSF51905 313 429 1.91E-41 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS22010 8d28a4894ebeb7fc7ca4b1cc24797732 434 SUPERFAMILY SSF51905 17 208 1.91E-41 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS22010 8d28a4894ebeb7fc7ca4b1cc24797732 434 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 331 344 - T 09-03-2017 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 NA29_RS22010 8d28a4894ebeb7fc7ca4b1cc24797732 434 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 332 348 2.5E-15 T 09-03-2017 NA29_RS22010 8d28a4894ebeb7fc7ca4b1cc24797732 434 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 317 332 2.5E-15 T 09-03-2017 NA29_RS22010 8d28a4894ebeb7fc7ca4b1cc24797732 434 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 19 41 2.5E-15 T 09-03-2017 NA29_RS22010 8d28a4894ebeb7fc7ca4b1cc24797732 434 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 19 429 1.9E-94 T 09-03-2017 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 NA29_RS22010 8d28a4894ebeb7fc7ca4b1cc24797732 434 Pfam PF01494 FAD binding domain 18 361 7.1E-23 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 NA29_RS22010 8d28a4894ebeb7fc7ca4b1cc24797732 434 Gene3D G3DSA:3.50.50.60 305 396 9.2E-29 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS22010 8d28a4894ebeb7fc7ca4b1cc24797732 434 Gene3D G3DSA:3.50.50.60 17 218 9.2E-29 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS06060 26871de38b6642e71b46b1dfb950f159 365 Gene3D G3DSA:1.10.10.10 11 104 1.0E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06060 26871de38b6642e71b46b1dfb950f159 365 SUPERFAMILY SSF46894 20 103 3.4E-12 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS06060 26871de38b6642e71b46b1dfb950f159 365 SMART SM00862 26 103 3.3E-12 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS06060 26871de38b6642e71b46b1dfb950f159 365 Pfam PF00486 Transcriptional regulatory protein, C terminal 30 103 6.1E-11 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS14085 126a393d597403793888a2258748748a 487 Gene3D G3DSA:3.20.20.80 423 473 4.6E-79 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NA29_RS14085 126a393d597403793888a2258748748a 487 Gene3D G3DSA:3.20.20.80 32 341 4.6E-79 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NA29_RS14085 126a393d597403793888a2258748748a 487 SMART SM00636 35 446 8.9E-59 T 09-03-2017 IPR011583 Chitinase II GO:0004568|GO:0006032 NA29_RS14085 126a393d597403793888a2258748748a 487 SUPERFAMILY SSF51445 418 448 6.99E-65 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily NA29_RS14085 126a393d597403793888a2258748748a 487 SUPERFAMILY SSF51445 35 337 6.99E-65 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily NA29_RS14085 126a393d597403793888a2258748748a 487 Pfam PF00704 Glycosyl hydrolases family 18 37 446 2.2E-58 T 09-03-2017 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 NA29_RS14085 126a393d597403793888a2258748748a 487 SUPERFAMILY SSF54556 359 416 1.89E-7 T 09-03-2017 IPR029070 Chitinase insertion domain NA29_RS14085 126a393d597403793888a2258748748a 487 Gene3D G3DSA:3.10.50.10 358 416 2.9E-10 T 09-03-2017 IPR029070 Chitinase insertion domain NA29_RS17430 d336bec64222a167c83a1f417a48d6aa 438 Gene3D G3DSA:1.10.8.60 151 213 9.7E-6 T 09-03-2017 NA29_RS17430 d336bec64222a167c83a1f417a48d6aa 438 Pfam PF16193 AAA C-terminal domain 181 256 7.1E-21 T 09-03-2017 IPR032423 AAA ATPase, C-terminal domain NA29_RS17430 d336bec64222a167c83a1f417a48d6aa 438 Gene3D G3DSA:1.20.272.10 238 336 1.2E-42 T 09-03-2017 NA29_RS17430 d336bec64222a167c83a1f417a48d6aa 438 SMART SM00382 46 162 1.1E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS17430 d336bec64222a167c83a1f417a48d6aa 438 SUPERFAMILY SSF48019 241 423 1.02E-71 T 09-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 NA29_RS17430 d336bec64222a167c83a1f417a48d6aa 438 SUPERFAMILY SSF52540 10 225 1.51E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17430 d336bec64222a167c83a1f417a48d6aa 438 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 50 156 3.9E-13 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 NA29_RS17430 d336bec64222a167c83a1f417a48d6aa 438 Gene3D G3DSA:1.10.3710.10 338 432 1.4E-33 T 09-03-2017 NA29_RS17430 d336bec64222a167c83a1f417a48d6aa 438 Gene3D G3DSA:3.40.50.300 10 150 2.8E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17430 d336bec64222a167c83a1f417a48d6aa 438 Pfam PF12002 MgsA AAA+ ATPase C terminal 257 423 9.5E-65 T 09-03-2017 IPR021886 MgsA AAA+ ATPase C-terminal NA29_RS12625 362a55054eb34274eebf6123de343422 162 Pfam PF01047 MarR family 35 92 1.4E-17 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS12625 362a55054eb34274eebf6123de343422 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 5.2E-12 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS12625 362a55054eb34274eebf6123de343422 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 5.2E-12 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS12625 362a55054eb34274eebf6123de343422 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 5.2E-12 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS12625 362a55054eb34274eebf6123de343422 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 5.2E-12 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS12625 362a55054eb34274eebf6123de343422 162 SUPERFAMILY SSF46785 7 144 9.0E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12625 362a55054eb34274eebf6123de343422 162 Gene3D G3DSA:1.10.10.10 9 143 1.4E-37 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12625 362a55054eb34274eebf6123de343422 162 SMART SM00347 28 128 2.2E-22 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS18005 5b82722cc24e7ee23b2ba03995600d92 315 PIRSF PIRSF002936 9 315 1.5E-135 T 09-03-2017 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 NA29_RS18005 5b82722cc24e7ee23b2ba03995600d92 315 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 39 268 1.3E-45 T 09-03-2017 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 NA29_RS18005 5b82722cc24e7ee23b2ba03995600d92 315 SUPERFAMILY SSF52402 15 222 8.84E-64 T 09-03-2017 NA29_RS18005 5b82722cc24e7ee23b2ba03995600d92 315 Gene3D G3DSA:3.40.50.620 256 264 1.3E-52 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS18005 5b82722cc24e7ee23b2ba03995600d92 315 Gene3D G3DSA:3.40.50.620 11 223 1.3E-52 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS19785 dacf8b611bb1216d5fe17f5f44e481e5 306 PIRSF PIRSF028756 17 306 2.9E-135 T 09-03-2017 IPR016898 Polyphosphate kinase 2 NA29_RS19785 dacf8b611bb1216d5fe17f5f44e481e5 306 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 53 277 1.2E-116 T 09-03-2017 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 NA29_RS19785 dacf8b611bb1216d5fe17f5f44e481e5 306 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 53 277 3.6E-114 T 09-03-2017 IPR022488 Polyphosphate kinase-2-related NA29_RS19785 dacf8b611bb1216d5fe17f5f44e481e5 306 Gene3D G3DSA:3.40.50.300 41 291 1.4E-108 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19785 dacf8b611bb1216d5fe17f5f44e481e5 306 SUPERFAMILY SSF52540 82 271 3.15E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13470 aa3db0a3d2246509f4f53c999c14e3a1 403 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 173 314 2.1E-25 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS13470 aa3db0a3d2246509f4f53c999c14e3a1 403 Pfam PF03454 MoeA C-terminal region (domain IV) 339 398 6.9E-10 T 09-03-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS13470 aa3db0a3d2246509f4f53c999c14e3a1 403 Gene3D G3DSA:2.170.190.11 45 137 5.8E-29 T 09-03-2017 NA29_RS13470 aa3db0a3d2246509f4f53c999c14e3a1 403 Gene3D G3DSA:2.40.340.10 333 400 7.4E-8 T 09-03-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS13470 aa3db0a3d2246509f4f53c999c14e3a1 403 SUPERFAMILY SSF53218 173 323 3.14E-42 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS13470 aa3db0a3d2246509f4f53c999c14e3a1 403 SMART SM00852 176 318 1.6E-44 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS13470 aa3db0a3d2246509f4f53c999c14e3a1 403 Gene3D G3DSA:3.40.980.10 159 332 1.1E-64 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS13470 aa3db0a3d2246509f4f53c999c14e3a1 403 Gene3D G3DSA:3.90.105.10 22 44 6.0E-20 T 09-03-2017 NA29_RS13470 aa3db0a3d2246509f4f53c999c14e3a1 403 Gene3D G3DSA:3.90.105.10 138 158 6.0E-20 T 09-03-2017 NA29_RS13470 aa3db0a3d2246509f4f53c999c14e3a1 403 SUPERFAMILY SSF63867 327 400 1.7E-13 T 09-03-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS13470 aa3db0a3d2246509f4f53c999c14e3a1 403 SUPERFAMILY SSF63882 1 172 2.62E-50 T 09-03-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS13470 aa3db0a3d2246509f4f53c999c14e3a1 403 Pfam PF00994 Probable molybdopterin binding domain 176 316 8.4E-27 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS13470 aa3db0a3d2246509f4f53c999c14e3a1 403 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 163 2.5E-36 T 09-03-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS04860 46dbc9664f60f8f9faa9bc87a23c520c 775 Gene3D G3DSA:2.40.50.140 122 213 7.2E-14 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS04860 46dbc9664f60f8f9faa9bc87a23c520c 775 SMART SM00487 344 542 3.8E-33 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain NA29_RS04860 46dbc9664f60f8f9faa9bc87a23c520c 775 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 109 747 5.0E-212 T 09-03-2017 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 NA29_RS04860 46dbc9664f60f8f9faa9bc87a23c520c 775 Pfam PF00271 Helicase conserved C-terminal domain 563 670 1.4E-17 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS04860 46dbc9664f60f8f9faa9bc87a23c520c 775 Pfam PF17191 RecG wedge domain 96 243 1.2E-9 T 09-03-2017 IPR033454 RecG, wedge domain NA29_RS04860 46dbc9664f60f8f9faa9bc87a23c520c 775 SUPERFAMILY SSF52540 291 536 1.56E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS04860 46dbc9664f60f8f9faa9bc87a23c520c 775 Gene3D G3DSA:3.40.50.300 334 536 7.1E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS04860 46dbc9664f60f8f9faa9bc87a23c520c 775 Pfam PF00270 DEAD/DEAH box helicase 370 517 1.8E-18 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NA29_RS04860 46dbc9664f60f8f9faa9bc87a23c520c 775 SMART SM00490 588 671 2.5E-21 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS04860 46dbc9664f60f8f9faa9bc87a23c520c 775 SUPERFAMILY SSF50249 95 247 2.57E-25 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS04860 46dbc9664f60f8f9faa9bc87a23c520c 775 SUPERFAMILY SSF52540 467 681 1.97E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS04860 46dbc9664f60f8f9faa9bc87a23c520c 775 Gene3D G3DSA:3.40.50.300 537 719 1.4E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14355 cf6c44763d1195ca1d77376e81ea35d8 446 Pfam PF00709 Adenylosuccinate synthetase 12 438 2.3E-174 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 NA29_RS14355 cf6c44763d1195ca1d77376e81ea35d8 446 SUPERFAMILY SSF52540 11 444 3.08E-172 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14355 cf6c44763d1195ca1d77376e81ea35d8 446 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 18 25 - T 09-03-2017 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 NA29_RS14355 cf6c44763d1195ca1d77376e81ea35d8 446 SMART SM00788 11 439 2.8E-296 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 NA29_RS14355 cf6c44763d1195ca1d77376e81ea35d8 446 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 140 151 - T 09-03-2017 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 NA29_RS14355 cf6c44763d1195ca1d77376e81ea35d8 446 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 13 444 5.5E-176 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 NA29_RS14355 cf6c44763d1195ca1d77376e81ea35d8 446 Gene3D G3DSA:1.10.300.10 110 203 2.2E-38 T 09-03-2017 NA29_RS14355 cf6c44763d1195ca1d77376e81ea35d8 446 Gene3D G3DSA:3.90.170.10 274 440 5.3E-64 T 09-03-2017 NA29_RS14355 cf6c44763d1195ca1d77376e81ea35d8 446 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 446 213.114 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 NA29_RS14355 cf6c44763d1195ca1d77376e81ea35d8 446 Gene3D G3DSA:3.40.440.10 11 101 2.9E-71 T 09-03-2017 NA29_RS14355 cf6c44763d1195ca1d77376e81ea35d8 446 Gene3D G3DSA:3.40.440.10 204 273 2.9E-71 T 09-03-2017 NA29_RS12110 ca7b0972eb27dace19c194a7123e019e 209 Pfam PF01694 Rhomboid family 50 200 3.5E-33 T 09-03-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 NA29_RS12110 ca7b0972eb27dace19c194a7123e019e 209 SMART SM01160 43 142 0.002 T 09-03-2017 NA29_RS12110 ca7b0972eb27dace19c194a7123e019e 209 SUPERFAMILY SSF144091 2 204 5.62E-40 T 09-03-2017 NA29_RS12110 ca7b0972eb27dace19c194a7123e019e 209 Gene3D G3DSA:1.20.1540.10 2 200 6.7E-41 T 09-03-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 NA29_RS12020 9bbe6c6d419cee7cdb7c81605be6f543 512 Pfam PF00591 Glycosyl transferase family, a/b domain 180 274 2.0E-7 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS12020 9bbe6c6d419cee7cdb7c81605be6f543 512 SUPERFAMILY SSF47648 110 174 4.97E-9 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS12020 9bbe6c6d419cee7cdb7c81605be6f543 512 SUPERFAMILY SSF52418 174 426 3.79E-59 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS12020 9bbe6c6d419cee7cdb7c81605be6f543 512 Pfam PF02885 Glycosyl transferase family, helical bundle domain 118 171 9.3E-8 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS12020 9bbe6c6d419cee7cdb7c81605be6f543 512 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 441 502 5.1E-10 T 09-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS12020 9bbe6c6d419cee7cdb7c81605be6f543 512 SMART SM00941 441 508 2.6E-17 T 09-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS12020 9bbe6c6d419cee7cdb7c81605be6f543 512 Gene3D G3DSA:2.40.40.20 70 100 5.8E-4 T 09-03-2017 NA29_RS12020 9bbe6c6d419cee7cdb7c81605be6f543 512 SUPERFAMILY SSF54680 428 504 8.63E-15 T 09-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS12020 9bbe6c6d419cee7cdb7c81605be6f543 512 TIGRFAM TIGR02645 ARCH_P_rylase: putative thymidine phosphorylase 20 507 1.5E-170 T 09-03-2017 IPR013466 Thymidine phosphorylase/AMP phosphorylase GO:0016763 NA29_RS12020 9bbe6c6d419cee7cdb7c81605be6f543 512 Gene3D G3DSA:3.90.1170.30 428 501 2.3E-13 T 09-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS12020 9bbe6c6d419cee7cdb7c81605be6f543 512 Hamap MF_00703 Putative thymidine phosphorylase. 20 512 54.248 T 09-03-2017 IPR028579 Putative thymidine phosphorylase KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 NA29_RS12020 9bbe6c6d419cee7cdb7c81605be6f543 512 Gene3D G3DSA:1.20.970.10 111 172 1.3E-7 T 09-03-2017 NA29_RS12020 9bbe6c6d419cee7cdb7c81605be6f543 512 Gene3D G3DSA:3.40.1030.10 174 425 1.3E-63 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS17935 2a4d2f622afb848e0e6a7168f79d5fa0 86 Pfam PF00034 Cytochrome c 3 79 3.2E-5 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS17935 2a4d2f622afb848e0e6a7168f79d5fa0 86 SUPERFAMILY SSF46626 3 79 1.65E-15 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS17935 2a4d2f622afb848e0e6a7168f79d5fa0 86 PRINTS PR00606 Class ID cytochrome C signature 42 55 6.2E-14 T 09-03-2017 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NA29_RS17935 2a4d2f622afb848e0e6a7168f79d5fa0 86 PRINTS PR00606 Class ID cytochrome C signature 19 32 6.2E-14 T 09-03-2017 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NA29_RS17935 2a4d2f622afb848e0e6a7168f79d5fa0 86 PRINTS PR00606 Class ID cytochrome C signature 57 67 6.2E-14 T 09-03-2017 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NA29_RS17935 2a4d2f622afb848e0e6a7168f79d5fa0 86 PRINTS PR00606 Class ID cytochrome C signature 69 79 6.2E-14 T 09-03-2017 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NA29_RS17935 2a4d2f622afb848e0e6a7168f79d5fa0 86 PRINTS PR00606 Class ID cytochrome C signature 4 17 6.2E-14 T 09-03-2017 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NA29_RS17935 2a4d2f622afb848e0e6a7168f79d5fa0 86 Gene3D G3DSA:1.10.760.10 1 80 6.7E-26 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS05170 82b60a6137e52a257f43fe10d1bfddbd 171 Gene3D G3DSA:1.10.1740.10 8 79 5.0E-9 T 09-03-2017 NA29_RS05170 82b60a6137e52a257f43fe10d1bfddbd 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 161 1.3E-19 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS05170 82b60a6137e52a257f43fe10d1bfddbd 171 Pfam PF04542 Sigma-70 region 2 15 79 5.9E-8 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS05170 82b60a6137e52a257f43fe10d1bfddbd 171 SUPERFAMILY SSF88946 7 96 6.67E-11 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS05170 82b60a6137e52a257f43fe10d1bfddbd 171 Pfam PF08281 Sigma-70, region 4 113 159 4.6E-11 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS05170 82b60a6137e52a257f43fe10d1bfddbd 171 Gene3D G3DSA:1.10.10.10 104 162 3.5E-9 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05170 82b60a6137e52a257f43fe10d1bfddbd 171 SUPERFAMILY SSF88659 83 166 1.31E-12 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS13175 6930f5c9b9dd2456757c0807f94c6b14 259 Gene3D G3DSA:3.40.1280.10 114 257 1.0E-44 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NA29_RS13175 6930f5c9b9dd2456757c0807f94c6b14 259 Gene3D G3DSA:3.30.1330.30 3 104 1.3E-11 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like NA29_RS13175 6930f5c9b9dd2456757c0807f94c6b14 259 Pfam PF00588 SpoU rRNA Methylase family 116 251 5.2E-31 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 NA29_RS13175 6930f5c9b9dd2456757c0807f94c6b14 259 SUPERFAMILY SSF75217 110 258 9.81E-41 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases NA29_RS13175 6930f5c9b9dd2456757c0807f94c6b14 259 SUPERFAMILY SSF55315 3 103 1.37E-11 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like NA29_RS16040 e83e963f2cd47a69f2e85283f5762ad4 200 Pfam PF04542 Sigma-70 region 2 41 109 1.3E-15 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS16040 e83e963f2cd47a69f2e85283f5762ad4 200 Gene3D G3DSA:1.10.10.10 140 200 1.0E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16040 e83e963f2cd47a69f2e85283f5762ad4 200 Gene3D G3DSA:1.10.1740.10 20 127 4.9E-23 T 09-03-2017 NA29_RS16040 e83e963f2cd47a69f2e85283f5762ad4 200 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 37 199 1.0E-19 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS16040 e83e963f2cd47a69f2e85283f5762ad4 200 Pfam PF08281 Sigma-70, region 4 144 195 3.4E-10 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS16040 e83e963f2cd47a69f2e85283f5762ad4 200 SUPERFAMILY SSF88659 141 200 1.0E-12 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS16040 e83e963f2cd47a69f2e85283f5762ad4 200 SUPERFAMILY SSF88946 17 120 2.35E-21 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SUPERFAMILY SSF49785 1607 1739 4.04E-23 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SUPERFAMILY SSF48726 2156 2244 1.4E-7 T 09-03-2017 IPR007110 Immunoglobulin-like domain GO:0005515 NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Pfam PF00703 Glycosyl hydrolases family 2 230 343 5.6E-9 T 09-03-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Gene3D G3DSA:2.60.40.10 1743 1825 6.9E-9 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Gene3D G3DSA:2.60.40.10 2155 2241 8.1E-9 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Gene3D G3DSA:2.60.40.10 1058 1137 3.6E-9 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Gene3D G3DSA:2.60.40.10 1512 1596 6.9E-9 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Pfam PF00754 F5/8 type C domain 1154 1269 8.5E-24 T 09-03-2017 IPR000421 Coagulation factor 5/8 C-terminal domain NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Pfam PF00754 F5/8 type C domain 1616 1733 2.1E-18 T 09-03-2017 IPR000421 Coagulation factor 5/8 C-terminal domain NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Pfam PF00754 F5/8 type C domain 1882 1990 1.4E-24 T 09-03-2017 IPR000421 Coagulation factor 5/8 C-terminal domain NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Pfam PF00754 F5/8 type C domain 2027 2137 9.1E-25 T 09-03-2017 IPR000421 Coagulation factor 5/8 C-terminal domain NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SUPERFAMILY SSF49785 1150 1275 5.95E-28 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SUPERFAMILY SSF48726 946 1045 6.92E-8 T 09-03-2017 IPR007110 Immunoglobulin-like domain GO:0005515 NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Gene3D G3DSA:2.60.40.10 881 965 4.9E-11 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 39 202 8.6E-14 T 09-03-2017 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SUPERFAMILY SSF49303 227 343 8.63E-11 T 09-03-2017 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SUPERFAMILY SSF49785 1868 1996 1.35E-27 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Pfam PF13927 Immunoglobulin domain 1058 1124 3.4E-7 T 09-03-2017 NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Gene3D G3DSA:2.60.40.1560 648 748 8.3E-5 T 09-03-2017 NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Pfam PF07679 Immunoglobulin I-set domain 1743 1784 3.0E-6 T 09-03-2017 IPR013098 Immunoglobulin I-set NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SUPERFAMILY SSF48726 1743 1828 3.16E-8 T 09-03-2017 IPR007110 Immunoglobulin-like domain GO:0005515 NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SUPERFAMILY SSF48726 1476 1580 4.42E-10 T 09-03-2017 IPR007110 Immunoglobulin-like domain GO:0005515 NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Gene3D G3DSA:2.60.120.260 28 194 1.0E-32 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Gene3D G3DSA:2.60.40.10 975 1053 1.6E-10 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SUPERFAMILY SSF48726 1406 1499 4.24E-10 T 09-03-2017 IPR007110 Immunoglobulin-like domain GO:0005515 NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SMART SM00231 1604 1740 0.48 T 09-03-2017 IPR000421 Coagulation factor 5/8 C-terminal domain NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SMART SM00231 1867 1996 0.0069 T 09-03-2017 IPR000421 Coagulation factor 5/8 C-terminal domain NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SMART SM00231 1143 1275 0.12 T 09-03-2017 IPR000421 Coagulation factor 5/8 C-terminal domain NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Gene3D G3DSA:2.60.40.320 195 344 1.5E-19 T 09-03-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Gene3D G3DSA:2.60.120.260 1866 2002 5.8E-31 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Gene3D G3DSA:2.60.120.260 1601 1742 1.3E-27 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Gene3D G3DSA:2.60.120.260 2013 2148 1.6E-33 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Pfam PF16483 Beta-1,3-glucanase 2263 2631 3.1E-80 T 09-03-2017 IPR032477 Beta-1,3-glucanase, N-terminal KEGG: 00500+3.2.1.39 NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SUPERFAMILY SSF49785 2018 2144 7.85E-30 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Gene3D G3DSA:3.20.20.80 353 636 1.4E-27 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Gene3D G3DSA:2.60.120.260 1144 1274 1.6E-28 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 371 498 4.1E-8 T 09-03-2017 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 Gene3D G3DSA:2.60.40.10 1405 1501 2.6E-10 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SUPERFAMILY SSF49785 22 204 1.56E-30 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SUPERFAMILY SSF51445 345 635 2.26E-28 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SUPERFAMILY SSF48726 1057 1131 3.1E-9 T 09-03-2017 IPR007110 Immunoglobulin-like domain GO:0005515 NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SMART SM00409 1748 1825 0.035 T 09-03-2017 IPR003599 Immunoglobulin subtype NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SMART SM00409 976 1053 0.2 T 09-03-2017 IPR003599 Immunoglobulin subtype NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SMART SM00409 1064 1140 3.7E-5 T 09-03-2017 IPR003599 Immunoglobulin subtype NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SMART SM00409 888 965 4.1 T 09-03-2017 IPR003599 Immunoglobulin subtype NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SMART SM00409 1520 1597 0.03 T 09-03-2017 IPR003599 Immunoglobulin subtype NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SMART SM00409 1413 1497 0.037 T 09-03-2017 IPR003599 Immunoglobulin subtype NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SMART SM00409 2162 2240 6.6 T 09-03-2017 IPR003599 Immunoglobulin subtype NA29_RS08440 dbfba776bfe5cdb578eb9af8f53c077b 2635 SUPERFAMILY SSF48726 881 965 2.73E-8 T 09-03-2017 IPR007110 Immunoglobulin-like domain GO:0005515 NA29_RS13655 4eadcc64a7be50d8306198efa4688f30 420 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 187 402 1.6E-37 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NA29_RS13655 4eadcc64a7be50d8306198efa4688f30 420 Gene3D G3DSA:2.40.50.100 349 383 3.3E-7 T 09-03-2017 NA29_RS13655 4eadcc64a7be50d8306198efa4688f30 420 Gene3D G3DSA:2.40.50.100 216 252 3.3E-7 T 09-03-2017 NA29_RS13655 4eadcc64a7be50d8306198efa4688f30 420 SUPERFAMILY SSF111369 188 331 1.16E-12 T 09-03-2017 NA29_RS13655 4eadcc64a7be50d8306198efa4688f30 420 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 120 327 1.2E-60 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NA29_RS07260 919f4ea81e3b32f94573bef79ced1bc1 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 1.4E-31 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 NA29_RS07260 919f4ea81e3b32f94573bef79ced1bc1 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 3.2E-27 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 NA29_RS07260 919f4ea81e3b32f94573bef79ced1bc1 158 SUPERFAMILY SSF54534 83 157 3.66E-23 T 09-03-2017 NA29_RS07260 919f4ea81e3b32f94573bef79ced1bc1 158 PIRSF PIRSF006092 1 158 1.2E-51 T 09-03-2017 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 NA29_RS07260 919f4ea81e3b32f94573bef79ced1bc1 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 2.1E-55 T 09-03-2017 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 NA29_RS07260 919f4ea81e3b32f94573bef79ced1bc1 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 09-03-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 NA29_RS07260 919f4ea81e3b32f94573bef79ced1bc1 158 SUPERFAMILY SSF46557 3 78 1.1E-27 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 NA29_RS07260 919f4ea81e3b32f94573bef79ced1bc1 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 09-03-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 NA29_RS07260 919f4ea81e3b32f94573bef79ced1bc1 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.309 T 09-03-2017 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 NA29_RS07260 919f4ea81e3b32f94573bef79ced1bc1 158 Gene3D G3DSA:1.10.287.180 1 75 3.8E-34 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 NA29_RS07260 919f4ea81e3b32f94573bef79ced1bc1 158 Gene3D G3DSA:3.10.50.30 82 157 1.9E-29 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 NA29_RS16275 dccedc3c60b211a326857c65e9f3b02b 257 SMART SM01007 29 210 1.7E-54 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS16275 dccedc3c60b211a326857c65e9f3b02b 257 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 29 210 1.8E-42 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS16275 dccedc3c60b211a326857c65e9f3b02b 257 Gene3D G3DSA:3.40.225.10 24 232 7.8E-57 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS16275 dccedc3c60b211a326857c65e9f3b02b 257 SUPERFAMILY SSF53639 20 232 3.73E-57 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS03455 857131382bdcc246af3601c902ce751c 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 4.2E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS03455 857131382bdcc246af3601c902ce751c 237 Gene3D G3DSA:1.10.3720.10 13 211 3.8E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS03455 857131382bdcc246af3601c902ce751c 237 SUPERFAMILY SSF161098 13 199 2.62E-35 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS03455 857131382bdcc246af3601c902ce751c 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 108 2.2E-20 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NA29_RS09770 c9fb0bf9e4065528bca437db6a101f4d 209 Pfam PF11159 Protein of unknown function (DUF2939) 11 102 1.1E-24 T 09-03-2017 IPR021330 Protein of unknown function DUF2939 NA29_RS13730 e8b41550c5a56ebffc55e7e03245b3f6 71 Gene3D G3DSA:2.40.50.140 1 65 7.0E-19 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS13730 e8b41550c5a56ebffc55e7e03245b3f6 71 PIRSF PIRSF002599 1 70 1.3E-14 T 09-03-2017 IPR012156 Cold shock, CspA GO:0003676 NA29_RS13730 e8b41550c5a56ebffc55e7e03245b3f6 71 SMART SM00357 3 67 2.5E-9 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 NA29_RS13730 e8b41550c5a56ebffc55e7e03245b3f6 71 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 6.2E-16 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS13730 e8b41550c5a56ebffc55e7e03245b3f6 71 PRINTS PR00050 Cold shock protein signature 40 58 8.2E-7 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS13730 e8b41550c5a56ebffc55e7e03245b3f6 71 PRINTS PR00050 Cold shock protein signature 25 34 8.2E-7 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS13730 e8b41550c5a56ebffc55e7e03245b3f6 71 PRINTS PR00050 Cold shock protein signature 4 19 8.2E-7 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS13730 e8b41550c5a56ebffc55e7e03245b3f6 71 SUPERFAMILY SSF50249 1 65 6.37E-16 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS11365 22ba8f4ba85a1a07355441af2aacd742 246 SMART SM00448 5 117 1.8E-39 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS11365 22ba8f4ba85a1a07355441af2aacd742 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 235 4.9E-21 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS11365 22ba8f4ba85a1a07355441af2aacd742 246 SUPERFAMILY SSF52172 6 133 8.82E-41 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS11365 22ba8f4ba85a1a07355441af2aacd742 246 Gene3D G3DSA:1.10.10.10 136 236 3.1E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11365 22ba8f4ba85a1a07355441af2aacd742 246 SUPERFAMILY SSF46894 136 236 1.5E-23 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS11365 22ba8f4ba85a1a07355441af2aacd742 246 SMART SM00862 159 235 3.7E-19 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS11365 22ba8f4ba85a1a07355441af2aacd742 246 Pfam PF00072 Response regulator receiver domain 7 118 6.8E-30 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS11365 22ba8f4ba85a1a07355441af2aacd742 246 Gene3D G3DSA:3.40.50.2300 6 126 8.5E-41 T 09-03-2017 NA29_RS14255 ba21608d8ed7e063bd3952eb6a4e9e50 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 213 7.2E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS14255 ba21608d8ed7e063bd3952eb6a4e9e50 219 SUPERFAMILY SSF161098 12 210 3.4E-46 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS14255 ba21608d8ed7e063bd3952eb6a4e9e50 219 Gene3D G3DSA:1.10.3720.10 11 213 1.2E-51 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS14255 ba21608d8ed7e063bd3952eb6a4e9e50 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 108 1.7E-30 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NA29_RS21400 f58c659db7b4dd2e1535aa08a2602ea6 286 SUPERFAMILY SSF54001 4 272 2.55E-75 T 09-03-2017 NA29_RS21400 f58c659db7b4dd2e1535aa08a2602ea6 286 PRINTS PR01543 Arylamine N-acetyltransferase signature 23 46 6.6E-13 T 09-03-2017 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 NA29_RS21400 f58c659db7b4dd2e1535aa08a2602ea6 286 PRINTS PR01543 Arylamine N-acetyltransferase signature 47 70 6.6E-13 T 09-03-2017 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 NA29_RS21400 f58c659db7b4dd2e1535aa08a2602ea6 286 PRINTS PR01543 Arylamine N-acetyltransferase signature 104 129 6.6E-13 T 09-03-2017 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 NA29_RS21400 f58c659db7b4dd2e1535aa08a2602ea6 286 PRINTS PR01543 Arylamine N-acetyltransferase signature 71 93 6.6E-13 T 09-03-2017 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 NA29_RS21400 f58c659db7b4dd2e1535aa08a2602ea6 286 Pfam PF00797 N-acetyltransferase 23 265 1.2E-70 T 09-03-2017 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 NA29_RS21400 f58c659db7b4dd2e1535aa08a2602ea6 286 Gene3D G3DSA:3.30.2140.10 192 271 3.3E-48 T 09-03-2017 NA29_RS21400 f58c659db7b4dd2e1535aa08a2602ea6 286 Gene3D G3DSA:3.30.2140.10 4 87 3.3E-48 T 09-03-2017 NA29_RS13375 036d85e8b910c3252843b0402b5f1f02 253 SUPERFAMILY SSF53067 6 113 9.71E-25 T 09-03-2017 NA29_RS13375 036d85e8b910c3252843b0402b5f1f02 253 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 6 227 6.2E-56 T 09-03-2017 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 NA29_RS13375 036d85e8b910c3252843b0402b5f1f02 253 SUPERFAMILY SSF53067 120 225 1.1E-21 T 09-03-2017 NA29_RS13375 036d85e8b910c3252843b0402b5f1f02 253 Pfam PF00814 Glycoprotease family 45 211 4.9E-25 T 09-03-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NA29_RS13375 036d85e8b910c3252843b0402b5f1f02 253 Gene3D G3DSA:3.30.420.40 6 144 3.7E-37 T 09-03-2017 NA29_RS12390 9feee8d18611881f041517e7f4b5e794 473 SMART SM00388 214 283 7.5E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS12390 9feee8d18611881f041517e7f4b5e794 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 336 450 1.9E-21 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS12390 9feee8d18611881f041517e7f4b5e794 473 SUPERFAMILY SSF47384 198 282 3.53E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS12390 9feee8d18611881f041517e7f4b5e794 473 Gene3D G3DSA:1.10.287.130 206 279 4.3E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS12390 9feee8d18611881f041517e7f4b5e794 473 SUPERFAMILY SSF55874 273 450 2.26E-31 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS12390 9feee8d18611881f041517e7f4b5e794 473 SMART SM00387 334 452 2.2E-31 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS12390 9feee8d18611881f041517e7f4b5e794 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 282 3.9E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS12390 9feee8d18611881f041517e7f4b5e794 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 385 4.0E-10 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS12390 9feee8d18611881f041517e7f4b5e794 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 4.0E-10 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS12390 9feee8d18611881f041517e7f4b5e794 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 4.0E-10 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS12390 9feee8d18611881f041517e7f4b5e794 473 Gene3D G3DSA:3.30.565.10 290 452 8.1E-33 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS21730 b7fe040087920aac829442ca570ef99b 552 Gene3D G3DSA:1.20.1250.20 18 225 1.2E-19 T 09-03-2017 NA29_RS21730 b7fe040087920aac829442ca570ef99b 552 Gene3D G3DSA:1.20.1250.20 449 544 4.8E-25 T 09-03-2017 NA29_RS21730 b7fe040087920aac829442ca570ef99b 552 Gene3D G3DSA:1.20.1250.20 249 337 4.8E-25 T 09-03-2017 NA29_RS21730 b7fe040087920aac829442ca570ef99b 552 SUPERFAMILY SSF103473 13 338 1.48E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS21730 b7fe040087920aac829442ca570ef99b 552 SUPERFAMILY SSF103473 453 546 1.48E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS21730 b7fe040087920aac829442ca570ef99b 552 ProSitePatterns PS00217 Sugar transport proteins signature 2. 130 155 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS21730 b7fe040087920aac829442ca570ef99b 552 Pfam PF00083 Sugar (and other) transporter 449 547 1.5E-6 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS21730 b7fe040087920aac829442ca570ef99b 552 Pfam PF00083 Sugar (and other) transporter 22 237 6.1E-28 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS22565 0eafabd52cb2e4246299b1e04297c4da 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 09-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 NA29_RS22565 0eafabd52cb2e4246299b1e04297c4da 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 257 1.4E-81 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS22565 0eafabd52cb2e4246299b1e04297c4da 258 SUPERFAMILY SSF52096 1 258 6.45E-90 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS22565 0eafabd52cb2e4246299b1e04297c4da 258 Gene3D G3DSA:3.90.226.10 1 256 9.8E-100 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS04150 ea0fe5f2510d2db2ebc207dc66e61db4 204 Gene3D G3DSA:1.10.10.10 140 203 1.6E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04150 ea0fe5f2510d2db2ebc207dc66e61db4 204 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 44 201 1.5E-31 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS04150 ea0fe5f2510d2db2ebc207dc66e61db4 204 SUPERFAMILY SSF88659 128 203 3.05E-14 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS04150 ea0fe5f2510d2db2ebc207dc66e61db4 204 Pfam PF08281 Sigma-70, region 4 145 198 2.4E-11 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS04150 ea0fe5f2510d2db2ebc207dc66e61db4 204 Gene3D G3DSA:1.10.1740.10 30 138 2.2E-24 T 09-03-2017 NA29_RS04150 ea0fe5f2510d2db2ebc207dc66e61db4 204 Pfam PF04542 Sigma-70 region 2 49 116 2.2E-17 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS04150 ea0fe5f2510d2db2ebc207dc66e61db4 204 SUPERFAMILY SSF88946 28 131 6.28E-24 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS22335 bb1d34f98e8d1bdcb40ad87ca478b9bb 376 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 4.5E-142 T 09-03-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 NA29_RS22335 bb1d34f98e8d1bdcb40ad87ca478b9bb 376 SUPERFAMILY SSF82051 2 158 2.22E-56 T 09-03-2017 IPR006169 GTP1/OBG domain GO:0005525 NA29_RS22335 bb1d34f98e8d1bdcb40ad87ca478b9bb 376 Hamap MF_01454 GTPase Obg [obg]. 2 334 47.525 T 09-03-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 NA29_RS22335 bb1d34f98e8d1bdcb40ad87ca478b9bb 376 Pfam PF01926 50S ribosome-binding GTPase 161 285 4.5E-24 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS22335 bb1d34f98e8d1bdcb40ad87ca478b9bb 376 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 09-03-2017 IPR006074 GTP1/OBG, conserved site GO:0005525 NA29_RS22335 bb1d34f98e8d1bdcb40ad87ca478b9bb 376 Pfam PF01018 GTP1/OBG 3 158 5.2E-59 T 09-03-2017 IPR006169 GTP1/OBG domain GO:0005525 NA29_RS22335 bb1d34f98e8d1bdcb40ad87ca478b9bb 376 SUPERFAMILY SSF52540 152 337 6.35E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22335 bb1d34f98e8d1bdcb40ad87ca478b9bb 376 Gene3D G3DSA:2.70.210.12 2 156 2.2E-57 T 09-03-2017 IPR006169 GTP1/OBG domain GO:0005525 NA29_RS22335 bb1d34f98e8d1bdcb40ad87ca478b9bb 376 PIRSF PIRSF002401 1 362 3.1E-133 T 09-03-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 NA29_RS22335 bb1d34f98e8d1bdcb40ad87ca478b9bb 376 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 2.0E-35 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS22335 bb1d34f98e8d1bdcb40ad87ca478b9bb 376 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 2.0E-35 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS22335 bb1d34f98e8d1bdcb40ad87ca478b9bb 376 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.0E-35 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS22335 bb1d34f98e8d1bdcb40ad87ca478b9bb 376 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.0E-35 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS22335 bb1d34f98e8d1bdcb40ad87ca478b9bb 376 Gene3D G3DSA:3.40.50.300 160 343 8.0E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07970 59cf6db505395270272c658ebf16c1a3 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 6.3E-52 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NA29_RS07970 59cf6db505395270272c658ebf16c1a3 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 6.3E-52 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NA29_RS07970 59cf6db505395270272c658ebf16c1a3 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 265 274 6.3E-52 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NA29_RS07970 59cf6db505395270272c658ebf16c1a3 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 6.3E-52 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NA29_RS07970 59cf6db505395270272c658ebf16c1a3 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 6.3E-52 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NA29_RS07970 59cf6db505395270272c658ebf16c1a3 343 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 6.3E-52 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NA29_RS07970 59cf6db505395270272c658ebf16c1a3 343 SUPERFAMILY SSF53067 3 121 1.29E-28 T 09-03-2017 NA29_RS07970 59cf6db505395270272c658ebf16c1a3 343 SUPERFAMILY SSF53067 101 311 2.78E-43 T 09-03-2017 NA29_RS07970 59cf6db505395270272c658ebf16c1a3 343 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 308 1.0E-112 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NA29_RS07970 59cf6db505395270272c658ebf16c1a3 343 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 336 60.711 T 09-03-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NA29_RS07970 59cf6db505395270272c658ebf16c1a3 343 Pfam PF00814 Glycoprotease family 24 309 4.3E-98 T 09-03-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NA29_RS07970 59cf6db505395270272c658ebf16c1a3 343 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 315 4.6E-131 T 09-03-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 NA29_RS07970 59cf6db505395270272c658ebf16c1a3 343 Gene3D G3DSA:3.30.420.40 1 159 6.3E-46 T 09-03-2017 NA29_RS16205 e19eaf1dc4f72f3104a5694c6beee9ef 218 SUPERFAMILY SSF142695 18 191 1.31E-61 T 09-03-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 NA29_RS16205 e19eaf1dc4f72f3104a5694c6beee9ef 218 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 17 216 40.852 T 09-03-2017 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 NA29_RS16205 e19eaf1dc4f72f3104a5694c6beee9ef 218 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 21 213 8.0E-71 T 09-03-2017 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 NA29_RS16205 e19eaf1dc4f72f3104a5694c6beee9ef 218 Pfam PF00925 GTP cyclohydrolase II 22 189 3.3E-68 T 09-03-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 428 1.6E-23 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 5.0E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 5.0E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 5.0E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 5.0E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 Gene3D G3DSA:3.30.450.20 93 189 4.8E-11 T 09-03-2017 NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 Gene3D G3DSA:1.10.287.130 197 257 6.1E-22 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 SUPERFAMILY SSF55874 261 427 6.55E-39 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 SMART SM00387 316 429 8.8E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 271 4.9E-20 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 Gene3D G3DSA:3.30.565.10 258 426 3.2E-40 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 425 3.1E-130 T 09-03-2017 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 SUPERFAMILY SSF55785 90 189 1.53E-6 T 09-03-2017 IPR000014 PAS domain NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 SUPERFAMILY SSF47384 196 271 1.75E-20 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 Pfam PF13188 PAS domain 99 143 1.5E-4 T 09-03-2017 IPR000014 PAS domain NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 SMART SM00388 206 272 4.5E-23 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS07325 abd9c2696cb8745e0033ad6d1e1c6637 446 Pfam PF11808 Domain of unknown function (DUF3329) 5 90 5.5E-18 T 09-03-2017 IPR021766 Protein of unknown function DUF3329 GO:0004673 NA29_RS06560 c20dbb49cb02c93ff672941730bad77e 452 Pfam PF11299 Protein of unknown function (DUF3100) 28 268 4.9E-95 T 09-03-2017 IPR021450 Protein of unknown function DUF3100 NA29_RS04870 9f5b4cbcbf6676cf1aa7dd322f0adff7 482 PIRSF PIRSF038928 1 482 7.0E-228 T 09-03-2017 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS04870 9f5b4cbcbf6676cf1aa7dd322f0adff7 482 Gene3D G3DSA:2.40.180.10 3 358 4.1E-180 T 09-03-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS04870 9f5b4cbcbf6676cf1aa7dd322f0adff7 482 PRINTS PR00067 Catalase signature 124 142 1.2E-74 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS04870 9f5b4cbcbf6676cf1aa7dd322f0adff7 482 PRINTS PR00067 Catalase signature 21 44 1.2E-74 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS04870 9f5b4cbcbf6676cf1aa7dd322f0adff7 482 PRINTS PR00067 Catalase signature 105 122 1.2E-74 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS04870 9f5b4cbcbf6676cf1aa7dd322f0adff7 482 PRINTS PR00067 Catalase signature 321 347 1.2E-74 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS04870 9f5b4cbcbf6676cf1aa7dd322f0adff7 482 PRINTS PR00067 Catalase signature 84 102 1.2E-74 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS04870 9f5b4cbcbf6676cf1aa7dd322f0adff7 482 PRINTS PR00067 Catalase signature 289 316 1.2E-74 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS04870 9f5b4cbcbf6676cf1aa7dd322f0adff7 482 SUPERFAMILY SSF56634 3 477 7.2E-212 T 09-03-2017 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS04870 9f5b4cbcbf6676cf1aa7dd322f0adff7 482 Pfam PF06628 Catalase-related immune-responsive 416 474 4.9E-21 T 09-03-2017 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS04870 9f5b4cbcbf6676cf1aa7dd322f0adff7 482 SMART SM01060 8 393 6.3E-291 T 09-03-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS04870 9f5b4cbcbf6676cf1aa7dd322f0adff7 482 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 09-03-2017 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS04870 9f5b4cbcbf6676cf1aa7dd322f0adff7 482 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 09-03-2017 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS04870 9f5b4cbcbf6676cf1aa7dd322f0adff7 482 Pfam PF00199 Catalase 8 389 1.2E-192 T 09-03-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS19165 f1db50c37b307c60a770939f77fb0f57 121 Pfam PF13806 Rieske-like [2Fe-2S] domain 9 105 4.5E-14 T 09-03-2017 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 NA29_RS19165 f1db50c37b307c60a770939f77fb0f57 121 SUPERFAMILY SSF50022 9 109 6.15E-32 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS19165 f1db50c37b307c60a770939f77fb0f57 121 Gene3D G3DSA:2.102.10.10 9 109 1.8E-28 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS19165 f1db50c37b307c60a770939f77fb0f57 121 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 9 106 2.1E-27 T 09-03-2017 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 NA29_RS21530 5910c0f888f7e500cf495f5c89b5c01f 1077 Pfam PF05650 Domain of unknown function (DUF802) 500 559 1.1E-13 T 09-03-2017 IPR008520 Domain of unknown function DUF802 NA29_RS21530 5910c0f888f7e500cf495f5c89b5c01f 1077 Pfam PF05650 Domain of unknown function (DUF802) 748 800 1.9E-13 T 09-03-2017 IPR008520 Domain of unknown function DUF802 NA29_RS21530 5910c0f888f7e500cf495f5c89b5c01f 1077 Pfam PF05650 Domain of unknown function (DUF802) 321 372 1.3E-16 T 09-03-2017 IPR008520 Domain of unknown function DUF802 NA29_RS21530 5910c0f888f7e500cf495f5c89b5c01f 1077 Pfam PF05650 Domain of unknown function (DUF802) 574 621 7.1E-13 T 09-03-2017 IPR008520 Domain of unknown function DUF802 NA29_RS21530 5910c0f888f7e500cf495f5c89b5c01f 1077 Pfam PF05650 Domain of unknown function (DUF802) 447 497 2.0E-14 T 09-03-2017 IPR008520 Domain of unknown function DUF802 NA29_RS21530 5910c0f888f7e500cf495f5c89b5c01f 1077 Pfam PF05650 Domain of unknown function (DUF802) 635 683 5.5E-11 T 09-03-2017 IPR008520 Domain of unknown function DUF802 NA29_RS21530 5910c0f888f7e500cf495f5c89b5c01f 1077 Pfam PF05650 Domain of unknown function (DUF802) 383 435 2.2E-14 T 09-03-2017 IPR008520 Domain of unknown function DUF802 NA29_RS21530 5910c0f888f7e500cf495f5c89b5c01f 1077 Pfam PF05650 Domain of unknown function (DUF802) 698 745 6.4E-11 T 09-03-2017 IPR008520 Domain of unknown function DUF802 NA29_RS14405 c9c2f6599f4203b69a08688d1accd2d9 458 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 10 433 32.381 T 09-03-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 NA29_RS14405 c9c2f6599f4203b69a08688d1accd2d9 458 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 15 417 2.0E-151 T 09-03-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 NA29_RS14405 c9c2f6599f4203b69a08688d1accd2d9 458 Pfam PF03129 Anticodon binding domain 337 432 2.4E-9 T 09-03-2017 IPR004154 Anticodon-binding NA29_RS14405 c9c2f6599f4203b69a08688d1accd2d9 458 SUPERFAMILY SSF55681 15 325 8.36E-100 T 09-03-2017 NA29_RS14405 c9c2f6599f4203b69a08688d1accd2d9 458 Gene3D G3DSA:3.40.50.800 332 432 1.0E-28 T 09-03-2017 IPR004154 Anticodon-binding NA29_RS14405 c9c2f6599f4203b69a08688d1accd2d9 458 SUPERFAMILY SSF52954 335 434 1.64E-19 T 09-03-2017 IPR004154 Anticodon-binding NA29_RS14405 c9c2f6599f4203b69a08688d1accd2d9 458 Pfam PF13393 Histidyl-tRNA synthetase 17 319 1.4E-48 T 09-03-2017 NA29_RS14405 c9c2f6599f4203b69a08688d1accd2d9 458 Gene3D G3DSA:3.30.930.10 14 192 6.5E-90 T 09-03-2017 NA29_RS14405 c9c2f6599f4203b69a08688d1accd2d9 458 Gene3D G3DSA:3.30.930.10 228 330 6.5E-90 T 09-03-2017 NA29_RS14405 c9c2f6599f4203b69a08688d1accd2d9 458 PIRSF PIRSF001549 9 435 1.5E-113 T 09-03-2017 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 NA29_RS06405 6f795a5f8718673919f10c0b948eee21 250 Pfam PF11249 Protein of unknown function (DUF3047) 48 245 5.8E-60 T 09-03-2017 IPR021409 Protein of unknown function DUF3047 NA29_RS09915 601a50f034e4f8aaff076ae28728e109 239 Gene3D G3DSA:3.40.50.880 8 234 8.2E-53 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS09915 601a50f034e4f8aaff076ae28728e109 239 SUPERFAMILY SSF52317 27 236 9.62E-44 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS09915 601a50f034e4f8aaff076ae28728e109 239 Pfam PF00117 Glutamine amidotransferase class-I 28 186 1.4E-16 T 09-03-2017 IPR017926 Glutamine amidotransferase NA29_RS07280 ddf8df2f3744dfb96c75c76659d6a11a 624 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 597 37.13 T 09-03-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 NA29_RS07280 ddf8df2f3744dfb96c75c76659d6a11a 624 SMART SM00382 186 325 1.3E-26 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS07280 ddf8df2f3744dfb96c75c76659d6a11a 624 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 09-03-2017 IPR003960 ATPase, AAA-type, conserved site GO:0005524 NA29_RS07280 ddf8df2f3744dfb96c75c76659d6a11a 624 SUPERFAMILY SSF52540 146 393 5.63E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07280 ddf8df2f3744dfb96c75c76659d6a11a 624 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 591 4.2E-232 T 09-03-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 NA29_RS07280 ddf8df2f3744dfb96c75c76659d6a11a 624 Pfam PF06480 FtsH Extracellular 11 78 9.5E-8 T 09-03-2017 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 NA29_RS07280 ddf8df2f3744dfb96c75c76659d6a11a 624 SUPERFAMILY SSF140990 404 600 2.09E-75 T 09-03-2017 NA29_RS07280 ddf8df2f3744dfb96c75c76659d6a11a 624 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 4.3E-46 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 NA29_RS07280 ddf8df2f3744dfb96c75c76659d6a11a 624 Gene3D G3DSA:3.40.50.300 146 332 6.8E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07280 ddf8df2f3744dfb96c75c76659d6a11a 624 Gene3D G3DSA:1.10.8.60 333 397 9.1E-28 T 09-03-2017 NA29_RS07280 ddf8df2f3744dfb96c75c76659d6a11a 624 Pfam PF01434 Peptidase family M41 384 589 4.7E-78 T 09-03-2017 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 NA29_RS12010 87b9df1d8f539acf4ed28348f2eddedc 347 Gene3D G3DSA:3.40.50.720 172 287 7.9E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS12010 87b9df1d8f539acf4ed28348f2eddedc 347 SUPERFAMILY SSF51735 139 305 5.85E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS12010 87b9df1d8f539acf4ed28348f2eddedc 347 Gene3D G3DSA:3.90.180.10 1 171 1.4E-55 T 09-03-2017 IPR011032 GroES-like NA29_RS12010 87b9df1d8f539acf4ed28348f2eddedc 347 Pfam PF00107 Zinc-binding dehydrogenase 177 292 8.7E-22 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NA29_RS12010 87b9df1d8f539acf4ed28348f2eddedc 347 SMART SM00829 8 343 0.0012 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NA29_RS12010 87b9df1d8f539acf4ed28348f2eddedc 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 129 3.5E-30 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NA29_RS12010 87b9df1d8f539acf4ed28348f2eddedc 347 SUPERFAMILY SSF50129 1 155 6.7E-56 T 09-03-2017 IPR011032 GroES-like NA29_RS12010 87b9df1d8f539acf4ed28348f2eddedc 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 09-03-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 SUPERFAMILY SSF52540 587 817 6.48E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 Pfam PF01624 MutS domain I 21 132 7.7E-42 T 09-03-2017 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 Pfam PF00488 MutS domain V 630 815 1.5E-82 T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 Gene3D G3DSA:3.30.420.110 140 273 2.3E-34 T 09-03-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 SMART SM00533 301 611 7.4E-89 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 SUPERFAMILY SSF48334 285 585 6.02E-83 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 21 895 0.0 T 09-03-2017 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 707 723 - T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 Gene3D G3DSA:3.40.50.300 587 817 2.7E-79 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 Gene3D G3DSA:1.10.1420.10 281 488 4.0E-47 T 09-03-2017 NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 SMART SM00534 626 813 8.5E-115 T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 Pfam PF05188 MutS domain II 141 270 3.4E-20 T 09-03-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 Gene3D G3DSA:3.40.1170.10 16 133 2.5E-49 T 09-03-2017 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 Pfam PF05192 MutS domain III 287 579 6.8E-34 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 20 890 24.487 T 09-03-2017 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 SUPERFAMILY SSF55271 16 128 3.79E-42 T 09-03-2017 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 Pfam PF05190 MutS family domain IV 449 539 7.5E-30 T 09-03-2017 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 NA29_RS15110 2d9e0bb59c6ee6659fc2aef764b14866 904 SUPERFAMILY SSF53150 130 298 5.23E-33 T 09-03-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 NA29_RS22115 238a4367362947b0413423e7021bdd14 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 131 1.1E-12 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NA29_RS22115 238a4367362947b0413423e7021bdd14 140 Gene3D G3DSA:3.10.180.10 14 137 9.0E-31 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS22115 238a4367362947b0413423e7021bdd14 140 SUPERFAMILY SSF54593 10 133 1.88E-29 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS19280 0717098d70f3f869ecaeb67605578c62 357 SUPERFAMILY SSF111369 33 281 4.32E-67 T 09-03-2017 NA29_RS19280 0717098d70f3f869ecaeb67605578c62 357 Pfam PF00529 HlyD membrane-fusion protein of T1SS 185 342 1.2E-6 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NA29_RS19280 0717098d70f3f869ecaeb67605578c62 357 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 23 356 4.0E-75 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NA29_RS19280 0717098d70f3f869ecaeb67605578c62 357 Gene3D G3DSA:2.40.50.100 46 79 9.6E-20 T 09-03-2017 NA29_RS19280 0717098d70f3f869ecaeb67605578c62 357 Gene3D G3DSA:2.40.50.100 154 186 9.6E-20 T 09-03-2017 NA29_RS19280 0717098d70f3f869ecaeb67605578c62 357 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 276 1.4E-14 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NA29_RS21370 4879cdf7208910717fa41a6bc280297e 309 SUPERFAMILY SSF48179 170 297 2.72E-40 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS21370 4879cdf7208910717fa41a6bc280297e 309 PIRSF PIRSF000103 4 301 6.3E-77 T 09-03-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 NA29_RS21370 4879cdf7208910717fa41a6bc280297e 309 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 14 27 - T 09-03-2017 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 NA29_RS21370 4879cdf7208910717fa41a6bc280297e 309 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 172 296 3.2E-33 T 09-03-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 NA29_RS21370 4879cdf7208910717fa41a6bc280297e 309 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 12 167 1.6E-46 T 09-03-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 NA29_RS21370 4879cdf7208910717fa41a6bc280297e 309 Gene3D G3DSA:1.10.1040.10 172 297 2.3E-41 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS21370 4879cdf7208910717fa41a6bc280297e 309 SUPERFAMILY SSF51735 11 169 1.46E-42 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS21370 4879cdf7208910717fa41a6bc280297e 309 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 14 297 1.2E-117 T 09-03-2017 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 NA29_RS21370 4879cdf7208910717fa41a6bc280297e 309 Gene3D G3DSA:3.40.50.720 9 170 1.1E-53 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS07620 6129f822e4757c4422aab4dbad04708a 318 Pfam PF04909 Amidohydrolase 9 316 1.5E-20 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS07620 6129f822e4757c4422aab4dbad04708a 318 SUPERFAMILY SSF51556 9 317 2.38E-50 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS07620 6129f822e4757c4422aab4dbad04708a 318 Gene3D G3DSA:3.20.20.140 9 317 2.7E-54 T 09-03-2017 NA29_RS13965 cb61bff8a93da180347fdb26d6daf29f 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 258 3.4E-75 T 09-03-2017 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 NA29_RS13965 cb61bff8a93da180347fdb26d6daf29f 259 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 214 225 - T 09-03-2017 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 NA29_RS13965 cb61bff8a93da180347fdb26d6daf29f 259 SUPERFAMILY SSF56219 1 258 4.97E-77 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase NA29_RS13965 cb61bff8a93da180347fdb26d6daf29f 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 250 1.8E-26 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase NA29_RS13965 cb61bff8a93da180347fdb26d6daf29f 259 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 257 5.0E-78 T 09-03-2017 NA29_RS13965 cb61bff8a93da180347fdb26d6daf29f 259 Gene3D G3DSA:3.60.10.10 1 258 1.4E-81 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase NA29_RS10775 977315443d0ed720463dbc94db330471 900 Gene3D G3DSA:3.90.550.10 310 544 2.0E-22 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS10775 977315443d0ed720463dbc94db330471 900 PRINTS PR01439 Cellulose synthase subunit A signature 704 725 7.6E-48 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 NA29_RS10775 977315443d0ed720463dbc94db330471 900 PRINTS PR01439 Cellulose synthase subunit A signature 400 424 7.6E-48 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 NA29_RS10775 977315443d0ed720463dbc94db330471 900 PRINTS PR01439 Cellulose synthase subunit A signature 319 338 7.6E-48 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 NA29_RS10775 977315443d0ed720463dbc94db330471 900 PRINTS PR01439 Cellulose synthase subunit A signature 590 609 7.6E-48 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 NA29_RS10775 977315443d0ed720463dbc94db330471 900 PRINTS PR01439 Cellulose synthase subunit A signature 236 256 7.6E-48 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 NA29_RS10775 977315443d0ed720463dbc94db330471 900 PRINTS PR01439 Cellulose synthase subunit A signature 264 289 7.6E-48 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 NA29_RS10775 977315443d0ed720463dbc94db330471 900 PRINTS PR01439 Cellulose synthase subunit A signature 630 649 7.6E-48 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 NA29_RS10775 977315443d0ed720463dbc94db330471 900 PRINTS PR01439 Cellulose synthase subunit A signature 561 587 7.6E-48 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 NA29_RS10775 977315443d0ed720463dbc94db330471 900 SUPERFAMILY SSF141371 732 822 8.63E-7 T 09-03-2017 NA29_RS10775 977315443d0ed720463dbc94db330471 900 SUPERFAMILY SSF53448 309 589 2.88E-51 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS10775 977315443d0ed720463dbc94db330471 900 Pfam PF00535 Glycosyl transferase family 2 313 484 9.0E-35 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 NA29_RS10775 977315443d0ed720463dbc94db330471 900 Pfam PF03552 Cellulose synthase 485 604 1.2E-13 T 09-03-2017 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 NA29_RS10775 977315443d0ed720463dbc94db330471 900 Pfam PF07238 PilZ domain 731 827 1.1E-11 T 09-03-2017 IPR009875 PilZ domain GO:0035438 NA29_RS10775 977315443d0ed720463dbc94db330471 900 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 186 867 1.5E-271 T 09-03-2017 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 NA29_RS25035 166b6136eedfe69b8b463413a142d7f4 336 SUPERFAMILY SSF103088 154 271 1.02E-18 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS25035 166b6136eedfe69b8b463413a142d7f4 336 Pfam PF00691 OmpA family 167 258 2.2E-12 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS25035 166b6136eedfe69b8b463413a142d7f4 336 Gene3D G3DSA:3.30.1330.60 163 271 1.9E-16 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS25035 166b6136eedfe69b8b463413a142d7f4 336 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 66 1.0E-20 T 09-03-2017 IPR025713 Motility protein B, N-terminal domain NA29_RS10665 8b452c60e3fbfd7454b59ae6313c3ec1 303 Pfam PF03466 LysR substrate binding domain 99 301 1.2E-17 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS10665 8b452c60e3fbfd7454b59ae6313c3ec1 303 SUPERFAMILY SSF53850 93 300 2.93E-35 T 09-03-2017 NA29_RS10665 8b452c60e3fbfd7454b59ae6313c3ec1 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.4E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10665 8b452c60e3fbfd7454b59ae6313c3ec1 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.4E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10665 8b452c60e3fbfd7454b59ae6313c3ec1 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.4E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10665 8b452c60e3fbfd7454b59ae6313c3ec1 303 Gene3D G3DSA:3.40.190.10 176 272 2.0E-16 T 09-03-2017 NA29_RS10665 8b452c60e3fbfd7454b59ae6313c3ec1 303 SUPERFAMILY SSF46785 7 88 4.35E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10665 8b452c60e3fbfd7454b59ae6313c3ec1 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 1.0E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10665 8b452c60e3fbfd7454b59ae6313c3ec1 303 Gene3D G3DSA:1.10.10.10 4 89 1.8E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10665 8b452c60e3fbfd7454b59ae6313c3ec1 303 Gene3D G3DSA:3.40.190.10 276 301 3.0E-29 T 09-03-2017 NA29_RS10665 8b452c60e3fbfd7454b59ae6313c3ec1 303 Gene3D G3DSA:3.40.190.10 93 175 3.0E-29 T 09-03-2017 NA29_RS17560 8c8d061e8632c884313e5d8e7dba486c 999 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 311 326 1.7E-54 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NA29_RS17560 8c8d061e8632c884313e5d8e7dba486c 999 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 818 844 1.7E-54 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NA29_RS17560 8c8d061e8632c884313e5d8e7dba486c 999 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 199 212 1.7E-54 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NA29_RS17560 8c8d061e8632c884313e5d8e7dba486c 999 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 251 267 1.7E-54 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NA29_RS17560 8c8d061e8632c884313e5d8e7dba486c 999 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 637 657 1.7E-54 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NA29_RS17560 8c8d061e8632c884313e5d8e7dba486c 999 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 462 482 1.7E-54 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NA29_RS17560 8c8d061e8632c884313e5d8e7dba486c 999 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 679 708 1.7E-54 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NA29_RS17560 8c8d061e8632c884313e5d8e7dba486c 999 Pfam PF00311 Phosphoenolpyruvate carboxylase 196 999 1.1E-289 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NA29_RS17560 8c8d061e8632c884313e5d8e7dba486c 999 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 61 999 19.389 T 09-03-2017 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NA29_RS17560 8c8d061e8632c884313e5d8e7dba486c 999 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 200 211 - T 09-03-2017 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NA29_RS17560 8c8d061e8632c884313e5d8e7dba486c 999 Gene3D G3DSA:1.20.1440.90 341 465 5.7E-21 T 09-03-2017 NA29_RS17560 8c8d061e8632c884313e5d8e7dba486c 999 SUPERFAMILY SSF51621 69 999 2.04E-299 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS17560 8c8d061e8632c884313e5d8e7dba486c 999 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 639 651 - T 09-03-2017 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 NA29_RS22045 c85eb8dc982d648a5f903c7884434a01 147 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NA29_RS22045 c85eb8dc982d648a5f903c7884434a01 147 SUPERFAMILY SSF54292 2 76 1.84E-23 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS22045 c85eb8dc982d648a5f903c7884434a01 147 SUPERFAMILY SSF47741 71 146 5.5E-30 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS22045 c85eb8dc982d648a5f903c7884434a01 147 Gene3D G3DSA:3.10.20.30 2 72 3.1E-26 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS22045 c85eb8dc982d648a5f903c7884434a01 147 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 50 1.7E-7 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS22045 c85eb8dc982d648a5f903c7884434a01 147 Gene3D G3DSA:1.10.150.120 73 146 1.0E-29 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS22045 c85eb8dc982d648a5f903c7884434a01 147 Pfam PF01799 [2Fe-2S] binding domain 71 141 5.9E-27 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS24290 da6ee387732239b3e8c19244c831480a 119 SUPERFAMILY SSF82771 8 77 1.44E-10 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily NA29_RS24290 da6ee387732239b3e8c19244c831480a 119 Pfam PF01541 GIY-YIG catalytic domain 9 79 2.3E-9 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily NA29_RS14125 78aa7139980eee894e384531a550fe62 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 09-03-2017 IPR019844 Cold-shock conserved site NA29_RS14125 78aa7139980eee894e384531a550fe62 67 SUPERFAMILY SSF50249 1 66 2.36E-25 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS14125 78aa7139980eee894e384531a550fe62 67 Gene3D G3DSA:2.40.50.140 1 66 2.4E-31 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS14125 78aa7139980eee894e384531a550fe62 67 SMART SM00357 3 67 1.5E-30 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 NA29_RS14125 78aa7139980eee894e384531a550fe62 67 PRINTS PR00050 Cold shock protein signature 40 58 1.3E-15 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS14125 78aa7139980eee894e384531a550fe62 67 PRINTS PR00050 Cold shock protein signature 4 19 1.3E-15 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS14125 78aa7139980eee894e384531a550fe62 67 PRINTS PR00050 Cold shock protein signature 25 34 1.3E-15 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS14125 78aa7139980eee894e384531a550fe62 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 3.7E-30 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS14125 78aa7139980eee894e384531a550fe62 67 PIRSF PIRSF002599 1 67 2.4E-24 T 09-03-2017 IPR012156 Cold shock, CspA GO:0003676 NA29_RS19895 8579916d1ea1249665dc403236e8a7e4 534 Gene3D G3DSA:1.20.58.100 411 516 2.9E-33 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS19895 8579916d1ea1249665dc403236e8a7e4 534 Pfam PF02910 Fumarate reductase flavoprotein C-term 435 515 1.0E-13 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS19895 8579916d1ea1249665dc403236e8a7e4 534 SUPERFAMILY SSF56425 232 347 6.73E-44 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS19895 8579916d1ea1249665dc403236e8a7e4 534 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 2 514 3.3E-201 T 09-03-2017 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 NA29_RS19895 8579916d1ea1249665dc403236e8a7e4 534 PIRSF PIRSF000171 1 525 2.6E-33 T 09-03-2017 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS19895 8579916d1ea1249665dc403236e8a7e4 534 SUPERFAMILY SSF51905 350 442 5.36E-77 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS19895 8579916d1ea1249665dc403236e8a7e4 534 SUPERFAMILY SSF51905 2 249 5.36E-77 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS19895 8579916d1ea1249665dc403236e8a7e4 534 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 349 371 2.2E-9 T 09-03-2017 NA29_RS19895 8579916d1ea1249665dc403236e8a7e4 534 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.2E-9 T 09-03-2017 NA29_RS19895 8579916d1ea1249665dc403236e8a7e4 534 Gene3D G3DSA:3.90.700.10 238 342 2.0E-40 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS19895 8579916d1ea1249665dc403236e8a7e4 534 SUPERFAMILY SSF46977 420 520 1.07E-30 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS19895 8579916d1ea1249665dc403236e8a7e4 534 Pfam PF00890 FAD binding domain 4 386 2.0E-105 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS19895 8579916d1ea1249665dc403236e8a7e4 534 Gene3D G3DSA:3.50.50.60 2 237 1.9E-104 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS19895 8579916d1ea1249665dc403236e8a7e4 534 Gene3D G3DSA:3.50.50.60 343 402 1.9E-104 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS04005 92e69b936bc9a052673486d1a31eca24 318 SUPERFAMILY SSF51569 2 301 6.04E-56 T 09-03-2017 NA29_RS04005 92e69b936bc9a052673486d1a31eca24 318 Gene3D G3DSA:3.20.20.70 4 296 1.3E-60 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS04005 92e69b936bc9a052673486d1a31eca24 318 Pfam PF00682 HMGL-like 5 283 6.1E-40 T 09-03-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 NA29_RS14845 45f7548cb361a63772fec49e936a6330 121 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 15 119 1.2E-37 T 09-03-2017 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 NA29_RS14845 45f7548cb361a63772fec49e936a6330 121 PIRSF PIRSF000169 7 121 1.9E-38 T 09-03-2017 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 NA29_RS14845 45f7548cb361a63772fec49e936a6330 121 SUPERFAMILY SSF81343 10 121 2.4E-31 T 09-03-2017 NA29_RS14845 45f7548cb361a63772fec49e936a6330 121 Gene3D G3DSA:1.20.1300.10 9 121 2.9E-36 T 09-03-2017 NA29_RS14845 45f7548cb361a63772fec49e936a6330 121 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 106 1.1E-15 T 09-03-2017 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS17950 91f9f080dd4b41077c2cfc68f67c92c1 503 PRINTS PR00481 Cytosol aminopeptidase signature 269 286 6.6E-55 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 NA29_RS17950 91f9f080dd4b41077c2cfc68f67c92c1 503 PRINTS PR00481 Cytosol aminopeptidase signature 350 370 6.6E-55 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 NA29_RS17950 91f9f080dd4b41077c2cfc68f67c92c1 503 PRINTS PR00481 Cytosol aminopeptidase signature 291 312 6.6E-55 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 NA29_RS17950 91f9f080dd4b41077c2cfc68f67c92c1 503 PRINTS PR00481 Cytosol aminopeptidase signature 378 393 6.6E-55 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 NA29_RS17950 91f9f080dd4b41077c2cfc68f67c92c1 503 PRINTS PR00481 Cytosol aminopeptidase signature 328 349 6.6E-55 T 09-03-2017 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 NA29_RS17950 91f9f080dd4b41077c2cfc68f67c92c1 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 11 502 38.464 T 09-03-2017 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 NA29_RS17950 91f9f080dd4b41077c2cfc68f67c92c1 503 Gene3D G3DSA:3.40.630.10 180 500 2.6E-140 T 09-03-2017 NA29_RS17950 91f9f080dd4b41077c2cfc68f67c92c1 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 354 361 - T 09-03-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 NA29_RS17950 91f9f080dd4b41077c2cfc68f67c92c1 503 SUPERFAMILY SSF52949 15 191 1.0E-39 T 09-03-2017 NA29_RS17950 91f9f080dd4b41077c2cfc68f67c92c1 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 193 493 1.1E-121 T 09-03-2017 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 NA29_RS17950 91f9f080dd4b41077c2cfc68f67c92c1 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 27 154 5.6E-26 T 09-03-2017 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 NA29_RS17950 91f9f080dd4b41077c2cfc68f67c92c1 503 SUPERFAMILY SSF53187 186 499 5.34E-125 T 09-03-2017 NA29_RS17950 91f9f080dd4b41077c2cfc68f67c92c1 503 Gene3D G3DSA:3.40.220.10 1 169 5.0E-48 T 09-03-2017 NA29_RS07360 8feed148ccccbbb2a69b7d3f15f368e7 87 Pfam PF01527 Transposase 2 70 2.8E-20 T 09-03-2017 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 NA29_RS07360 8feed148ccccbbb2a69b7d3f15f368e7 87 SUPERFAMILY SSF46689 1 70 5.11E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS07360 8feed148ccccbbb2a69b7d3f15f368e7 87 Gene3D G3DSA:1.10.10.60 7 83 2.5E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS07535 21447a7e86b9613f45e4c357847d7fad 435 Gene3D G3DSA:1.20.1250.20 14 220 3.6E-25 T 09-03-2017 NA29_RS07535 21447a7e86b9613f45e4c357847d7fad 435 Gene3D G3DSA:1.20.1250.20 243 422 1.1E-17 T 09-03-2017 NA29_RS07535 21447a7e86b9613f45e4c357847d7fad 435 ProSitePatterns PS00217 Sugar transport proteins signature 2. 131 156 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS07535 21447a7e86b9613f45e4c357847d7fad 435 SUPERFAMILY SSF103473 16 425 4.05E-67 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS07535 21447a7e86b9613f45e4c357847d7fad 435 ProSitePatterns PS00216 Sugar transport proteins signature 1. 298 315 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS07535 21447a7e86b9613f45e4c357847d7fad 435 Pfam PF07690 Major Facilitator Superfamily 36 380 1.8E-28 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS07535 21447a7e86b9613f45e4c357847d7fad 435 ProSitePatterns PS00216 Sugar transport proteins signature 1. 81 97 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS01350 16ecabe4c6027a4815557f14188d6415 334 SMART SM00382 28 235 1.6E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS01350 16ecabe4c6027a4815557f14188d6415 334 Pfam PF00005 ABC transporter 20 177 6.4E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS01350 16ecabe4c6027a4815557f14188d6415 334 Gene3D G3DSA:3.40.50.300 3 256 5.5E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01350 16ecabe4c6027a4815557f14188d6415 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 227 301 4.6E-20 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS01350 16ecabe4c6027a4815557f14188d6415 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 229 293 4.0E-17 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS01350 16ecabe4c6027a4815557f14188d6415 334 SUPERFAMILY SSF52540 28 300 8.59E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03585 e5abfe952c99b7bea146a4a563ffc20f 388 Gene3D G3DSA:3.40.47.10 25 114 1.0E-12 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS03585 e5abfe952c99b7bea146a4a563ffc20f 388 Gene3D G3DSA:3.40.47.10 196 225 1.0E-12 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS03585 e5abfe952c99b7bea146a4a563ffc20f 388 Gene3D G3DSA:3.40.47.10 150 184 2.0E-9 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS03585 e5abfe952c99b7bea146a4a563ffc20f 388 Gene3D G3DSA:3.40.47.10 239 366 2.0E-9 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS03585 e5abfe952c99b7bea146a4a563ffc20f 388 SUPERFAMILY SSF53901 182 350 2.79E-18 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS03585 e5abfe952c99b7bea146a4a563ffc20f 388 SUPERFAMILY SSF53901 23 120 2.79E-18 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS03585 e5abfe952c99b7bea146a4a563ffc20f 388 SUPERFAMILY SSF53901 251 368 6.09E-18 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS03585 e5abfe952c99b7bea146a4a563ffc20f 388 PIRSF PIRSF000429 8 367 2.7E-15 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS24485 3e775824b47aa5f7c6231d5e971f51ef 109 Pfam PF00034 Cytochrome c 24 102 4.8E-5 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24485 3e775824b47aa5f7c6231d5e971f51ef 109 Gene3D G3DSA:1.10.760.10 26 103 1.4E-32 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24485 3e775824b47aa5f7c6231d5e971f51ef 109 SUPERFAMILY SSF46626 29 103 2.4E-17 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24485 3e775824b47aa5f7c6231d5e971f51ef 109 PRINTS PR00606 Class ID cytochrome C signature 94 104 1.8E-21 T 09-03-2017 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NA29_RS24485 3e775824b47aa5f7c6231d5e971f51ef 109 PRINTS PR00606 Class ID cytochrome C signature 44 57 1.8E-21 T 09-03-2017 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NA29_RS24485 3e775824b47aa5f7c6231d5e971f51ef 109 PRINTS PR00606 Class ID cytochrome C signature 29 42 1.8E-21 T 09-03-2017 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NA29_RS24485 3e775824b47aa5f7c6231d5e971f51ef 109 PRINTS PR00606 Class ID cytochrome C signature 82 92 1.8E-21 T 09-03-2017 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NA29_RS24485 3e775824b47aa5f7c6231d5e971f51ef 109 PRINTS PR00606 Class ID cytochrome C signature 67 80 1.8E-21 T 09-03-2017 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 NA29_RS16450 49c3dc904a9184003bbab9c43e742a23 415 TIGRFAM TIGR03253 oxalate_frc: formyl-CoA transferase 3 414 6.8E-219 T 09-03-2017 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695 NA29_RS16450 49c3dc904a9184003bbab9c43e742a23 415 Gene3D G3DSA:3.40.50.10540 326 415 8.9E-105 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS16450 49c3dc904a9184003bbab9c43e742a23 415 Gene3D G3DSA:3.40.50.10540 3 215 8.9E-105 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS16450 49c3dc904a9184003bbab9c43e742a23 415 Hamap MF_00742 Formyl-CoA:oxalate CoA-transferase [frc]. 1 415 64.628 T 09-03-2017 IPR017659 Formyl-CoA:oxalate CoA-transferase GO:0008152|GO:0033608 MetaCyc: PWY-6695 NA29_RS16450 49c3dc904a9184003bbab9c43e742a23 415 Gene3D G3DSA:3.30.1540.10 245 325 2.3E-27 T 09-03-2017 NA29_RS16450 49c3dc904a9184003bbab9c43e742a23 415 Pfam PF02515 CoA-transferase family III 5 392 1.6E-98 T 09-03-2017 IPR003673 CoA-transferase family III GO:0003824 NA29_RS16450 49c3dc904a9184003bbab9c43e742a23 415 SUPERFAMILY SSF89796 2 415 5.76E-123 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 09-03-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 21 427 2.8E-132 T 09-03-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 Pfam PF00344 SecY translocase 77 415 4.9E-118 T 09-03-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 117 140 1.1E-95 T 09-03-2017 NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.1E-95 T 09-03-2017 NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 24 42 1.1E-95 T 09-03-2017 NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 313 335 1.1E-95 T 09-03-2017 NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 368 386 1.1E-95 T 09-03-2017 NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.1E-95 T 09-03-2017 NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 76 96 1.1E-95 T 09-03-2017 NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 400 418 1.1E-95 T 09-03-2017 NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.1E-95 T 09-03-2017 NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 SUPERFAMILY SSF103491 15 422 7.32E-133 T 09-03-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 Gene3D G3DSA:1.10.3370.10 16 435 1.1E-168 T 09-03-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 ProSitePatterns PS00755 Protein secY signature 1. 77 96 - T 09-03-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 PIRSF PIRSF004557 6 438 1.4E-127 T 09-03-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 NA29_RS23770 11f8af7cd72cc850b2c2e2eeb83bc934 445 Hamap MF_01465 Protein translocase subunit SecY [secY]. 11 431 29.471 T 09-03-2017 IPR026593 Protein translocase subunit SecY NA29_RS14650 1e364065131dbccf7b85bb23b7383590 224 SUPERFAMILY SSF48452 58 179 1.59E-24 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS14650 1e364065131dbccf7b85bb23b7383590 224 Pfam PF14559 Tetratricopeptide repeat 94 152 3.4E-8 T 09-03-2017 NA29_RS14650 1e364065131dbccf7b85bb23b7383590 224 SMART SM00028 118 151 4.8E-5 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS14650 1e364065131dbccf7b85bb23b7383590 224 SMART SM00028 84 117 34.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS14650 1e364065131dbccf7b85bb23b7383590 224 SMART SM00028 152 180 37.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS14650 1e364065131dbccf7b85bb23b7383590 224 Gene3D G3DSA:1.25.40.10 57 179 2.7E-27 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS18685 1c7eccbb97e95ade6ccce985672f1fe3 304 SUPERFAMILY SSF46785 1 83 1.43E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18685 1c7eccbb97e95ade6ccce985672f1fe3 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18685 1c7eccbb97e95ade6ccce985672f1fe3 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18685 1c7eccbb97e95ade6ccce985672f1fe3 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18685 1c7eccbb97e95ade6ccce985672f1fe3 304 Gene3D G3DSA:1.10.10.10 1 84 4.1E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18685 1c7eccbb97e95ade6ccce985672f1fe3 304 Gene3D G3DSA:3.40.190.10 175 263 1.3E-28 T 09-03-2017 NA29_RS18685 1c7eccbb97e95ade6ccce985672f1fe3 304 SUPERFAMILY SSF53850 90 289 1.05E-32 T 09-03-2017 NA29_RS18685 1c7eccbb97e95ade6ccce985672f1fe3 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.0E-22 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18685 1c7eccbb97e95ade6ccce985672f1fe3 304 Pfam PF03466 LysR substrate binding domain 89 288 4.4E-39 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS18685 1c7eccbb97e95ade6ccce985672f1fe3 304 Gene3D G3DSA:3.40.190.10 88 174 2.0E-22 T 09-03-2017 NA29_RS10200 fe654148c8d2326e5ac5ffa442c50a98 515 Pfam PF02321 Outer membrane efflux protein 81 273 3.0E-24 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS10200 fe654148c8d2326e5ac5ffa442c50a98 515 Pfam PF02321 Outer membrane efflux protein 297 484 1.6E-30 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS10200 fe654148c8d2326e5ac5ffa442c50a98 515 Gene3D G3DSA:1.20.1600.10 70 107 6.7E-106 T 09-03-2017 NA29_RS10200 fe654148c8d2326e5ac5ffa442c50a98 515 Gene3D G3DSA:1.20.1600.10 373 487 6.7E-106 T 09-03-2017 NA29_RS10200 fe654148c8d2326e5ac5ffa442c50a98 515 Gene3D G3DSA:1.20.1600.10 161 331 6.7E-106 T 09-03-2017 NA29_RS10200 fe654148c8d2326e5ac5ffa442c50a98 515 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 17 486 3.6E-118 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NA29_RS10200 fe654148c8d2326e5ac5ffa442c50a98 515 Gene3D G3DSA:2.20.200.10 332 363 1.7E-14 T 09-03-2017 NA29_RS10200 fe654148c8d2326e5ac5ffa442c50a98 515 Gene3D G3DSA:2.20.200.10 117 160 1.7E-14 T 09-03-2017 NA29_RS10200 fe654148c8d2326e5ac5ffa442c50a98 515 SUPERFAMILY SSF56954 72 488 1.02E-114 T 09-03-2017 NA29_RS10200 fe654148c8d2326e5ac5ffa442c50a98 515 SUPERFAMILY SSF56954 5 34 1.02E-114 T 09-03-2017 NA29_RS22635 85a1af2fba3425e70dcca5f4c7879210 899 SUPERFAMILY SSF52540 5 221 7.4E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22635 85a1af2fba3425e70dcca5f4c7879210 899 Pfam PF12698 ABC-2 family transporter protein 554 887 8.0E-36 T 09-03-2017 NA29_RS22635 85a1af2fba3425e70dcca5f4c7879210 899 SMART SM00382 284 475 8.2E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS22635 85a1af2fba3425e70dcca5f4c7879210 899 SMART SM00382 19 240 1.2E-4 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS22635 85a1af2fba3425e70dcca5f4c7879210 899 Gene3D G3DSA:3.40.50.300 3 222 3.7E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22635 85a1af2fba3425e70dcca5f4c7879210 899 Gene3D G3DSA:3.40.50.300 254 484 2.0E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22635 85a1af2fba3425e70dcca5f4c7879210 899 Pfam PF00005 ABC transporter 10 157 6.7E-26 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS22635 85a1af2fba3425e70dcca5f4c7879210 899 Pfam PF00005 ABC transporter 276 419 6.1E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS22635 85a1af2fba3425e70dcca5f4c7879210 899 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS22635 85a1af2fba3425e70dcca5f4c7879210 899 SUPERFAMILY SSF52540 250 482 7.38E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS12255 5b35d990aa6e9e22589c18484da19c0c 217 Gene3D G3DSA:1.20.1050.10 93 210 1.1E-29 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS12255 5b35d990aa6e9e22589c18484da19c0c 217 SUPERFAMILY SSF52833 1 86 1.08E-22 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS12255 5b35d990aa6e9e22589c18484da19c0c 217 SUPERFAMILY SSF47616 82 211 4.26E-21 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS12255 5b35d990aa6e9e22589c18484da19c0c 217 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 4 211 6.4E-57 T 09-03-2017 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 NA29_RS12255 5b35d990aa6e9e22589c18484da19c0c 217 Gene3D G3DSA:3.40.30.10 3 92 7.4E-26 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS12255 5b35d990aa6e9e22589c18484da19c0c 217 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 76 2.0E-16 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS23650 0193bf9e185fb488834c924960745c0c 358 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 357 42.295 T 09-03-2017 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 NA29_RS23650 0193bf9e185fb488834c924960745c0c 358 Pfam PF01761 3-dehydroquinate synthase 68 324 3.6E-108 T 09-03-2017 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 NA29_RS23650 0193bf9e185fb488834c924960745c0c 358 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 351 5.4E-121 T 09-03-2017 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 NA29_RS23650 0193bf9e185fb488834c924960745c0c 358 SUPERFAMILY SSF56796 5 351 1.83E-116 T 09-03-2017 NA29_RS23650 0193bf9e185fb488834c924960745c0c 358 PIRSF PIRSF001455 5 357 2.4E-110 T 09-03-2017 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 NA29_RS23650 0193bf9e185fb488834c924960745c0c 358 Gene3D G3DSA:1.20.1090.10 173 355 1.1E-68 T 09-03-2017 NA29_RS23650 0193bf9e185fb488834c924960745c0c 358 Gene3D G3DSA:3.40.50.1970 3 172 4.5E-67 T 09-03-2017 NA29_RS13770 b17cb08fec83039f774e1947764539a5 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 3.7E-10 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NA29_RS13770 b17cb08fec83039f774e1947764539a5 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 3.7E-10 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NA29_RS13770 b17cb08fec83039f774e1947764539a5 248 SUPERFAMILY SSF51206 23 163 4.45E-30 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like NA29_RS13770 b17cb08fec83039f774e1947764539a5 248 Gene3D G3DSA:2.60.120.10 20 170 1.3E-28 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS13770 b17cb08fec83039f774e1947764539a5 248 SMART SM00419 187 235 6.1E-13 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NA29_RS13770 b17cb08fec83039f774e1947764539a5 248 Pfam PF00027 Cyclic nucleotide-binding domain 49 131 1.9E-14 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain NA29_RS13770 b17cb08fec83039f774e1947764539a5 248 Gene3D G3DSA:1.10.10.10 171 244 2.2E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13770 b17cb08fec83039f774e1947764539a5 248 SMART SM00100 30 148 1.1E-17 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain NA29_RS13770 b17cb08fec83039f774e1947764539a5 248 SUPERFAMILY SSF46785 166 244 8.02E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13770 b17cb08fec83039f774e1947764539a5 248 Pfam PF13545 Crp-like helix-turn-helix domain 168 242 2.6E-17 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NA29_RS03760 87b3a8796cdaa37461ae6d65af741637 577 SUPERFAMILY SSF51905 295 406 2.21E-61 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03760 87b3a8796cdaa37461ae6d65af741637 577 SUPERFAMILY SSF51905 29 204 2.21E-61 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03760 87b3a8796cdaa37461ae6d65af741637 577 Gene3D G3DSA:3.30.9.10 356 386 6.5E-13 T 09-03-2017 NA29_RS03760 87b3a8796cdaa37461ae6d65af741637 577 Gene3D G3DSA:3.30.9.10 196 301 6.5E-13 T 09-03-2017 NA29_RS03760 87b3a8796cdaa37461ae6d65af741637 577 Gene3D G3DSA:3.50.50.60 306 345 3.5E-48 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03760 87b3a8796cdaa37461ae6d65af741637 577 Gene3D G3DSA:3.50.50.60 28 195 3.5E-48 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03760 87b3a8796cdaa37461ae6d65af741637 577 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 183 198 1.8E-34 T 09-03-2017 NA29_RS03760 87b3a8796cdaa37461ae6d65af741637 577 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 29 51 1.8E-34 T 09-03-2017 NA29_RS03760 87b3a8796cdaa37461ae6d65af741637 577 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 341 359 1.8E-34 T 09-03-2017 NA29_RS03760 87b3a8796cdaa37461ae6d65af741637 577 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 323 339 1.8E-34 T 09-03-2017 NA29_RS03760 87b3a8796cdaa37461ae6d65af741637 577 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 308 323 1.8E-34 T 09-03-2017 NA29_RS03760 87b3a8796cdaa37461ae6d65af741637 577 Pfam PF01494 FAD binding domain 29 373 3.5E-62 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 NA29_RS15260 b353f0903bc311d00099182f3ae05ee2 727 Gene3D G3DSA:2.170.130.10 66 190 4.6E-26 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS15260 b353f0903bc311d00099182f3ae05ee2 727 Pfam PF00593 TonB dependent receptor 487 725 5.9E-34 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS15260 b353f0903bc311d00099182f3ae05ee2 727 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 86 726 1.1E-124 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NA29_RS15260 b353f0903bc311d00099182f3ae05ee2 727 Gene3D G3DSA:2.40.170.20 198 727 6.1E-129 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS15260 b353f0903bc311d00099182f3ae05ee2 727 SUPERFAMILY SSF56935 79 727 1.75E-118 T 09-03-2017 NA29_RS15260 b353f0903bc311d00099182f3ae05ee2 727 Pfam PF07715 TonB-dependent Receptor Plug Domain 84 182 2.9E-10 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS03790 ef2c7725eb88babafb130c233806e162 137 SMART SM00347 19 119 1.4E-12 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS03790 ef2c7725eb88babafb130c233806e162 137 Pfam PF12802 MarR family 25 83 7.0E-13 T 09-03-2017 NA29_RS03790 ef2c7725eb88babafb130c233806e162 137 Gene3D G3DSA:1.10.10.10 1 132 2.1E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03790 ef2c7725eb88babafb130c233806e162 137 ProSitePatterns PS01117 MarR-type HTH domain signature. 58 92 - T 09-03-2017 IPR023187 Transcriptional regulator MarR-type, conserved site NA29_RS03790 ef2c7725eb88babafb130c233806e162 137 SUPERFAMILY SSF46785 1 131 4.37E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13310 9228a32dd0274da09473dfe5826c94fc 115 Pfam PF03960 ArsC family 6 112 5.2E-17 T 09-03-2017 IPR006660 Arsenate reductase-like NA29_RS13310 9228a32dd0274da09473dfe5826c94fc 115 SUPERFAMILY SSF52833 4 113 3.66E-32 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS13310 9228a32dd0274da09473dfe5826c94fc 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 112 1.6E-28 T 09-03-2017 IPR006504 Transcriptional regulator Spx/MgsR NA29_RS13310 9228a32dd0274da09473dfe5826c94fc 115 Gene3D G3DSA:3.40.30.10 4 113 2.6E-40 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS19210 22e35a3f056a3949dfdbaee46182c844 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 120 2.0E-26 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS19210 22e35a3f056a3949dfdbaee46182c844 389 Gene3D G3DSA:2.40.110.10 124 218 7.2E-38 T 09-03-2017 NA29_RS19210 22e35a3f056a3949dfdbaee46182c844 389 SUPERFAMILY SSF56645 8 244 1.31E-70 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NA29_RS19210 22e35a3f056a3949dfdbaee46182c844 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 216 3.5E-27 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NA29_RS19210 22e35a3f056a3949dfdbaee46182c844 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 385 1.7E-44 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS19210 22e35a3f056a3949dfdbaee46182c844 389 Gene3D G3DSA:1.20.140.10 219 387 6.2E-61 T 09-03-2017 NA29_RS19210 22e35a3f056a3949dfdbaee46182c844 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 09-03-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NA29_RS19210 22e35a3f056a3949dfdbaee46182c844 389 Gene3D G3DSA:1.10.540.10 8 121 3.5E-27 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS19210 22e35a3f056a3949dfdbaee46182c844 389 SUPERFAMILY SSF47203 229 387 6.6E-54 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS06835 09110b597f335cdd0e03c8d41b75356e 66 ProSitePatterns PS01047 Heavy-metal-associated domain. 5 34 - T 09-03-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 NA29_RS06835 09110b597f335cdd0e03c8d41b75356e 66 Gene3D G3DSA:3.30.70.100 1 61 3.1E-21 T 09-03-2017 NA29_RS06835 09110b597f335cdd0e03c8d41b75356e 66 Pfam PF00403 Heavy-metal-associated domain 3 60 3.6E-14 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NA29_RS06835 09110b597f335cdd0e03c8d41b75356e 66 SUPERFAMILY SSF55008 2 61 2.23E-16 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 NA29_RS05760 8100c13a71dd771fda6c7bf6832bb5ac 275 SUPERFAMILY SSF55781 89 272 2.88E-36 T 09-03-2017 IPR029016 GAF domain-like NA29_RS05760 8100c13a71dd771fda6c7bf6832bb5ac 275 SMART SM00346 22 112 2.2E-22 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS05760 8100c13a71dd771fda6c7bf6832bb5ac 275 SUPERFAMILY SSF46785 22 95 2.47E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05760 8100c13a71dd771fda6c7bf6832bb5ac 275 Pfam PF01614 Bacterial transcriptional regulator 142 272 2.8E-13 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS05760 8100c13a71dd771fda6c7bf6832bb5ac 275 Gene3D G3DSA:3.30.450.40 92 273 5.5E-37 T 09-03-2017 IPR029016 GAF domain-like NA29_RS05760 8100c13a71dd771fda6c7bf6832bb5ac 275 Gene3D G3DSA:1.10.10.10 16 91 4.0E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05760 8100c13a71dd771fda6c7bf6832bb5ac 275 Pfam PF09339 IclR helix-turn-helix domain 24 74 3.6E-14 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS15510 467bb564357f7fe4e2dde468e373343c 778 SUPERFAMILY SSF56719 37 511 1.57E-149 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 NA29_RS15510 467bb564357f7fe4e2dde468e373343c 778 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 38 495 5.8E-130 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15510 467bb564357f7fe4e2dde468e373343c 778 Gene3D G3DSA:2.120.10.90 520 719 6.3E-29 T 09-03-2017 NA29_RS15510 467bb564357f7fe4e2dde468e373343c 778 SUPERFAMILY SSF101904 526 753 1.02E-46 T 09-03-2017 NA29_RS15510 467bb564357f7fe4e2dde468e373343c 778 Gene3D G3DSA:3.30.1360.40 243 359 3.3E-20 T 09-03-2017 IPR024946 Arginine repressor C-terminal-like domain NA29_RS15510 467bb564357f7fe4e2dde468e373343c 778 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 673 716 0.055 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NA29_RS15510 467bb564357f7fe4e2dde468e373343c 778 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 622 655 2.8 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NA29_RS15510 467bb564357f7fe4e2dde468e373343c 778 Gene3D G3DSA:3.90.199.10 37 242 1.7E-109 T 09-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15510 467bb564357f7fe4e2dde468e373343c 778 Gene3D G3DSA:3.90.199.10 361 426 1.7E-109 T 09-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15510 467bb564357f7fe4e2dde468e373343c 778 SMART SM00434 17 489 4.3E-220 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15510 467bb564357f7fe4e2dde468e373343c 778 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 16 753 3.9E-234 T 09-03-2017 NA29_RS15510 467bb564357f7fe4e2dde468e373343c 778 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 10 766 33.218 T 09-03-2017 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NA29_RS01400 ba2e458ef421f3cdf8b9d525c2b60df2 240 Pfam PF00005 ABC transporter 19 167 3.8E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS01400 ba2e458ef421f3cdf8b9d525c2b60df2 240 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS01400 ba2e458ef421f3cdf8b9d525c2b60df2 240 SMART SM00382 28 215 8.5E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS01400 ba2e458ef421f3cdf8b9d525c2b60df2 240 Gene3D G3DSA:3.40.50.300 2 238 1.7E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01400 ba2e458ef421f3cdf8b9d525c2b60df2 240 PIRSF PIRSF039085 1 240 2.3E-107 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 NA29_RS01400 ba2e458ef421f3cdf8b9d525c2b60df2 240 SUPERFAMILY SSF52540 3 237 7.45E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 Pfam PF00667 FAD binding domain 248 444 1.9E-32 T 09-03-2017 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 PIRSF PIRSF000207 1 619 6.8E-250 T 09-03-2017 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 Pfam PF00175 Oxidoreductase NAD-binding domain 477 583 5.7E-19 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 SUPERFAMILY SSF63380 246 465 5.24E-63 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 3 619 5.0E-234 T 09-03-2017 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 Gene3D G3DSA:3.40.50.80 475 618 4.2E-59 T 09-03-2017 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 PRINTS PR00369 Flavodoxin signature 142 152 2.2E-15 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 PRINTS PR00369 Flavodoxin signature 62 75 2.2E-15 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 PRINTS PR00369 Flavodoxin signature 166 185 2.2E-15 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 PRINTS PR00369 Flavodoxin signature 110 121 2.2E-15 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 Gene3D G3DSA:1.20.990.10 298 403 9.2E-29 T 09-03-2017 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 Gene3D G3DSA:2.40.30.10 404 474 1.0E-39 T 09-03-2017 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 Gene3D G3DSA:2.40.30.10 246 297 1.0E-39 T 09-03-2017 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 Pfam PF00258 Flavodoxin 63 185 1.5E-34 T 09-03-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 SUPERFAMILY SSF52343 464 619 5.24E-52 T 09-03-2017 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 Gene3D G3DSA:3.40.50.360 55 204 1.4E-49 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 SUPERFAMILY SSF52218 59 207 4.01E-48 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 406 413 2.9E-30 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 514 525 2.9E-30 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 439 448 2.9E-30 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 568 576 2.9E-30 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 545 561 2.9E-30 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 287 297 2.9E-30 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 501 510 2.9E-30 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS09745 18df7db3afd790b25729f63db2cebf18 619 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 476 495 2.9E-30 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS07545 638988ffc9e562cfab483c3db730c17b 237 Gene3D G3DSA:3.40.50.1000 14 230 5.9E-29 T 09-03-2017 IPR023214 HAD-like domain NA29_RS07545 638988ffc9e562cfab483c3db730c17b 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 18 201 1.6E-11 T 09-03-2017 IPR023214 HAD-like domain NA29_RS07545 638988ffc9e562cfab483c3db730c17b 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 190 203 3.5E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS07545 638988ffc9e562cfab483c3db730c17b 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 12 23 3.5E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS07545 638988ffc9e562cfab483c3db730c17b 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 3.5E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS07545 638988ffc9e562cfab483c3db730c17b 237 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 15 187 1.3E-12 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS07545 638988ffc9e562cfab483c3db730c17b 237 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 14 206 1.4E-40 T 09-03-2017 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 NA29_RS07545 638988ffc9e562cfab483c3db730c17b 237 SUPERFAMILY SSF56784 15 234 4.67E-40 T 09-03-2017 IPR023214 HAD-like domain NA29_RS18310 c38c5501285e3c02d73c011cce4726ff 499 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 18 499 9.4E-197 T 09-03-2017 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 NA29_RS18310 c38c5501285e3c02d73c011cce4726ff 499 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 18 171 2.6E-52 T 09-03-2017 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 NA29_RS18310 c38c5501285e3c02d73c011cce4726ff 499 Hamap MF_01932 AMP nucleosidase [amn]. 9 499 61.385 T 09-03-2017 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 NA29_RS18310 c38c5501285e3c02d73c011cce4726ff 499 Pfam PF01048 Phosphorylase superfamily 283 444 1.2E-12 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NA29_RS18310 c38c5501285e3c02d73c011cce4726ff 499 SUPERFAMILY SSF53167 15 499 3.14E-148 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NA29_RS18310 c38c5501285e3c02d73c011cce4726ff 499 Gene3D G3DSA:3.40.50.1580 179 480 7.9E-114 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NA29_RS18310 c38c5501285e3c02d73c011cce4726ff 499 Gene3D G3DSA:3.30.1730.10 10 173 7.3E-57 T 09-03-2017 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 NA29_RS19090 fed8aca11326f2ce3684ee23b7493174 166 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 41 152 1.6E-20 T 09-03-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 NA29_RS19090 fed8aca11326f2ce3684ee23b7493174 166 SUPERFAMILY SSF54637 39 159 3.82E-26 T 09-03-2017 IPR029069 HotDog domain NA29_RS19090 fed8aca11326f2ce3684ee23b7493174 166 Pfam PF03061 Thioesterase superfamily 72 149 2.3E-14 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 NA29_RS19090 fed8aca11326f2ce3684ee23b7493174 166 Gene3D G3DSA:3.10.129.10 33 158 3.4E-31 T 09-03-2017 IPR029069 HotDog domain NA29_RS12910 615881b11ddc7e417c9213e6cf524fba 452 SUPERFAMILY SSF51556 60 373 4.99E-101 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS12910 615881b11ddc7e417c9213e6cf524fba 452 Pfam PF01979 Amidohydrolase family 57 422 2.4E-63 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS12910 615881b11ddc7e417c9213e6cf524fba 452 SUPERFAMILY SSF51338 373 447 1.36E-23 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS12910 615881b11ddc7e417c9213e6cf524fba 452 SUPERFAMILY SSF51338 6 60 1.36E-23 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS12910 615881b11ddc7e417c9213e6cf524fba 452 Gene3D G3DSA:2.30.40.10 1 68 2.1E-17 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS12910 615881b11ddc7e417c9213e6cf524fba 452 Gene3D G3DSA:3.20.20.140 69 390 6.0E-114 T 09-03-2017 NA29_RS06505 d12a46df16d2122b01c60d860bf727ca 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 91 2.2E-11 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NA29_RS06505 d12a46df16d2122b01c60d860bf727ca 336 SUPERFAMILY SSF50129 10 164 1.27E-37 T 09-03-2017 IPR011032 GroES-like NA29_RS06505 d12a46df16d2122b01c60d860bf727ca 336 Gene3D G3DSA:3.90.180.10 1 166 9.9E-39 T 09-03-2017 IPR011032 GroES-like NA29_RS06505 d12a46df16d2122b01c60d860bf727ca 336 Gene3D G3DSA:3.40.50.720 167 278 8.5E-27 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS06505 d12a46df16d2122b01c60d860bf727ca 336 SMART SM00829 10 329 2.0E-13 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NA29_RS06505 d12a46df16d2122b01c60d860bf727ca 336 Pfam PF00107 Zinc-binding dehydrogenase 170 290 2.4E-23 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NA29_RS06505 d12a46df16d2122b01c60d860bf727ca 336 SUPERFAMILY SSF51735 136 305 1.1E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS23960 650a78d0c16f8c70c087eebc4a251a71 428 Pfam PF07690 Major Facilitator Superfamily 282 422 1.6E-10 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS23960 650a78d0c16f8c70c087eebc4a251a71 428 Pfam PF00083 Sugar (and other) transporter 24 223 3.4E-19 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS23960 650a78d0c16f8c70c087eebc4a251a71 428 SUPERFAMILY SSF103473 19 422 2.62E-64 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS23960 650a78d0c16f8c70c087eebc4a251a71 428 Gene3D G3DSA:1.20.1250.20 21 221 4.7E-22 T 09-03-2017 NA29_RS23960 650a78d0c16f8c70c087eebc4a251a71 428 Gene3D G3DSA:1.20.1250.20 240 419 9.1E-24 T 09-03-2017 NA29_RS07835 6f70f4c0c5cd5e702b08c6d11110777a 874 Pfam PF01411 tRNA synthetases class II (A) 5 554 3.6E-224 T 09-03-2017 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 NA29_RS07835 6f70f4c0c5cd5e702b08c6d11110777a 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 853 0.0 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 NA29_RS07835 6f70f4c0c5cd5e702b08c6d11110777a 874 Pfam PF02272 DHHA1 domain 800 866 1.1E-14 T 09-03-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 NA29_RS07835 6f70f4c0c5cd5e702b08c6d11110777a 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 205.609 T 09-03-2017 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 NA29_RS07835 6f70f4c0c5cd5e702b08c6d11110777a 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 1.3E-32 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 NA29_RS07835 6f70f4c0c5cd5e702b08c6d11110777a 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 1.3E-32 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 NA29_RS07835 6f70f4c0c5cd5e702b08c6d11110777a 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 205 216 1.3E-32 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 NA29_RS07835 6f70f4c0c5cd5e702b08c6d11110777a 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 1.3E-32 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 NA29_RS07835 6f70f4c0c5cd5e702b08c6d11110777a 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 232 245 1.3E-32 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 NA29_RS07835 6f70f4c0c5cd5e702b08c6d11110777a 874 SMART SM00863 653 695 2.4E-18 T 09-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 NA29_RS07835 6f70f4c0c5cd5e702b08c6d11110777a 874 SUPERFAMILY SSF50447 453 552 5.65E-18 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain NA29_RS07835 6f70f4c0c5cd5e702b08c6d11110777a 874 SUPERFAMILY SSF55681 2 251 1.64E-109 T 09-03-2017 NA29_RS07835 6f70f4c0c5cd5e702b08c6d11110777a 874 Gene3D G3DSA:3.30.930.10 1 247 2.3E-125 T 09-03-2017 NA29_RS07835 6f70f4c0c5cd5e702b08c6d11110777a 874 SUPERFAMILY SSF101353 252 448 3.14E-62 T 09-03-2017 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 NA29_RS07835 6f70f4c0c5cd5e702b08c6d11110777a 874 SUPERFAMILY SSF55186 552 707 1.57E-46 T 09-03-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 NA29_RS07835 6f70f4c0c5cd5e702b08c6d11110777a 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 695 1.2E-15 T 09-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 NA29_RS14275 61c0b8ec863beb599c8ac10b49845761 275 Pfam PF09339 IclR helix-turn-helix domain 18 66 5.5E-15 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS14275 61c0b8ec863beb599c8ac10b49845761 275 Pfam PF01614 Bacterial transcriptional regulator 133 252 5.8E-33 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS14275 61c0b8ec863beb599c8ac10b49845761 275 SMART SM00346 15 104 1.0E-20 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS14275 61c0b8ec863beb599c8ac10b49845761 275 SUPERFAMILY SSF55781 72 257 1.24E-44 T 09-03-2017 IPR029016 GAF domain-like NA29_RS14275 61c0b8ec863beb599c8ac10b49845761 275 SUPERFAMILY SSF46785 15 86 2.93E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14275 61c0b8ec863beb599c8ac10b49845761 275 Gene3D G3DSA:1.10.10.10 14 84 1.8E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14275 61c0b8ec863beb599c8ac10b49845761 275 Gene3D G3DSA:3.30.450.40 85 260 3.8E-51 T 09-03-2017 IPR029016 GAF domain-like NA29_RS00250 7946e944cf17b2b4a98b975d70907587 410 Gene3D G3DSA:3.50.50.60 109 131 4.2E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS00250 7946e944cf17b2b4a98b975d70907587 410 Gene3D G3DSA:3.50.50.60 191 264 4.2E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS00250 7946e944cf17b2b4a98b975d70907587 410 Gene3D G3DSA:3.50.50.60 2 59 4.2E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS00250 7946e944cf17b2b4a98b975d70907587 410 Gene3D G3DSA:3.50.50.60 353 410 4.2E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS00250 7946e944cf17b2b4a98b975d70907587 410 Gene3D G3DSA:3.30.9.10 265 305 5.4E-4 T 09-03-2017 NA29_RS00250 7946e944cf17b2b4a98b975d70907587 410 Gene3D G3DSA:3.30.9.10 137 190 5.4E-4 T 09-03-2017 NA29_RS00250 7946e944cf17b2b4a98b975d70907587 410 SUPERFAMILY SSF54373 268 353 3.02E-8 T 09-03-2017 NA29_RS00250 7946e944cf17b2b4a98b975d70907587 410 SUPERFAMILY SSF51905 108 265 3.24E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS00250 7946e944cf17b2b4a98b975d70907587 410 SUPERFAMILY SSF51905 353 410 3.24E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS00250 7946e944cf17b2b4a98b975d70907587 410 SUPERFAMILY SSF51905 2 55 3.24E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS00250 7946e944cf17b2b4a98b975d70907587 410 Pfam PF01266 FAD dependent oxidoreductase 4 392 6.8E-53 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS03095 1bd8a836e6c66b1a65e89191ffcb009f 379 Pfam PF00512 His Kinase A (phospho-acceptor) domain 153 216 1.6E-10 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS03095 1bd8a836e6c66b1a65e89191ffcb009f 379 Gene3D G3DSA:3.30.565.10 228 368 4.4E-31 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS03095 1bd8a836e6c66b1a65e89191ffcb009f 379 SMART SM00387 263 370 1.4E-25 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS03095 1bd8a836e6c66b1a65e89191ffcb009f 379 SMART SM00388 152 218 2.5E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS03095 1bd8a836e6c66b1a65e89191ffcb009f 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 326 6.2E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS03095 1bd8a836e6c66b1a65e89191ffcb009f 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 347 6.2E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS03095 1bd8a836e6c66b1a65e89191ffcb009f 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 312 6.2E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS03095 1bd8a836e6c66b1a65e89191ffcb009f 379 Gene3D G3DSA:1.10.287.130 143 214 8.7E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS03095 1bd8a836e6c66b1a65e89191ffcb009f 379 SUPERFAMILY SSF47384 135 217 7.46E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS03095 1bd8a836e6c66b1a65e89191ffcb009f 379 SUPERFAMILY SSF55874 210 369 1.96E-34 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS03095 1bd8a836e6c66b1a65e89191ffcb009f 379 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 266 366 4.2E-14 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS06830 162f07fd16dac2c8db5d3ad869d50d9b 217 SUPERFAMILY SSF55821 16 211 1.85E-81 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain NA29_RS06830 162f07fd16dac2c8db5d3ad869d50d9b 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 17 210 5.4E-74 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS06830 162f07fd16dac2c8db5d3ad869d50d9b 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 19 209 9.8E-82 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS06830 162f07fd16dac2c8db5d3ad869d50d9b 217 Gene3D G3DSA:3.90.870.10 17 212 3.1E-90 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain NA29_RS06830 162f07fd16dac2c8db5d3ad869d50d9b 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.368 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS22420 10ae66844224044190d8e2770d3c2969 304 Gene3D G3DSA:3.30.230.20 3 125 2.3E-44 T 09-03-2017 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 NA29_RS22420 10ae66844224044190d8e2770d3c2969 304 SUPERFAMILY SSF54211 3 123 6.9E-41 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS22420 10ae66844224044190d8e2770d3c2969 304 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 3.1E-108 T 09-03-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 NA29_RS22420 10ae66844224044190d8e2770d3c2969 304 Gene3D G3DSA:3.30.1700.10 128 278 4.8E-60 T 09-03-2017 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 NA29_RS22420 10ae66844224044190d8e2770d3c2969 304 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 46.606 T 09-03-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 NA29_RS22420 10ae66844224044190d8e2770d3c2969 304 SUPERFAMILY SSF54211 133 277 6.6E-53 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS22420 10ae66844224044190d8e2770d3c2969 304 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 295 1.3E-122 T 09-03-2017 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 NA29_RS14825 0a34db4b233501d19d8764c2b4938f4e 433 PRINTS PR00143 Citrate synthase signature 364 380 2.6E-55 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS14825 0a34db4b233501d19d8764c2b4938f4e 433 PRINTS PR00143 Citrate synthase signature 384 398 2.6E-55 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS14825 0a34db4b233501d19d8764c2b4938f4e 433 PRINTS PR00143 Citrate synthase signature 223 238 2.6E-55 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS14825 0a34db4b233501d19d8764c2b4938f4e 433 PRINTS PR00143 Citrate synthase signature 245 273 2.6E-55 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS14825 0a34db4b233501d19d8764c2b4938f4e 433 PRINTS PR00143 Citrate synthase signature 300 320 2.6E-55 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS14825 0a34db4b233501d19d8764c2b4938f4e 433 PRINTS PR00143 Citrate synthase signature 169 182 2.6E-55 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS14825 0a34db4b233501d19d8764c2b4938f4e 433 Gene3D G3DSA:1.10.580.10 56 284 1.1E-98 T 09-03-2017 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 NA29_RS14825 0a34db4b233501d19d8764c2b4938f4e 433 Gene3D G3DSA:1.10.230.10 285 378 3.5E-41 T 09-03-2017 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 NA29_RS14825 0a34db4b233501d19d8764c2b4938f4e 433 ProSitePatterns PS00480 Citrate synthase signature. 307 319 - T 09-03-2017 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 NA29_RS14825 0a34db4b233501d19d8764c2b4938f4e 433 PIRSF PIRSF001369 41 433 3.5E-166 T 09-03-2017 IPR024176 Citrate synthase, bacterial-type NA29_RS14825 0a34db4b233501d19d8764c2b4938f4e 433 SUPERFAMILY SSF48256 9 433 1.83E-168 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS14825 0a34db4b233501d19d8764c2b4938f4e 433 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 18 427 8.8E-242 T 09-03-2017 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 NA29_RS14825 0a34db4b233501d19d8764c2b4938f4e 433 Pfam PF00285 Citrate synthase, C-terminal domain 50 416 2.0E-134 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS04440 3896c24dac3318ddb5be072f60e4d987 387 Pfam PF13091 PLD-like domain 26 133 1.9E-14 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 NA29_RS04440 3896c24dac3318ddb5be072f60e4d987 387 Pfam PF13091 PLD-like domain 221 341 5.3E-23 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 NA29_RS04440 3896c24dac3318ddb5be072f60e4d987 387 SUPERFAMILY SSF56024 193 364 3.14E-36 T 09-03-2017 NA29_RS04440 3896c24dac3318ddb5be072f60e4d987 387 Gene3D G3DSA:3.30.870.10 211 375 1.7E-33 T 09-03-2017 NA29_RS04440 3896c24dac3318ddb5be072f60e4d987 387 Gene3D G3DSA:3.30.870.10 6 171 3.9E-33 T 09-03-2017 NA29_RS04440 3896c24dac3318ddb5be072f60e4d987 387 Hamap MF_01917 Cardiolipin synthase B [clsB]. 4 387 41.413 T 09-03-2017 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 NA29_RS04440 3896c24dac3318ddb5be072f60e4d987 387 SUPERFAMILY SSF56024 4 176 2.62E-35 T 09-03-2017 NA29_RS04440 3896c24dac3318ddb5be072f60e4d987 387 SMART SM00155 105 132 0.015 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 NA29_RS04440 3896c24dac3318ddb5be072f60e4d987 387 SMART SM00155 290 317 0.085 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 NA29_RS11470 52d9999510721ebf523a5338b7488435 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 259 3.7E-10 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS11470 52d9999510721ebf523a5338b7488435 273 SUPERFAMILY SSF161098 6 265 1.31E-41 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS11470 52d9999510721ebf523a5338b7488435 273 Gene3D G3DSA:1.10.3720.10 12 271 4.4E-37 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS12155 ae38b3d958906b2e1f9f52d40baeb3d1 124 Pfam PF05957 Bacterial protein of unknown function (DUF883) 14 100 5.3E-14 T 09-03-2017 IPR010279 Protein of unknown function DUF883, ElaB NA29_RS11100 4ed06dca19d7857b7c7c1cbe9ee70d5c 156 Gene3D G3DSA:1.10.1660.10 2 56 1.9E-17 T 09-03-2017 NA29_RS11100 4ed06dca19d7857b7c7c1cbe9ee70d5c 156 SMART SM00422 3 71 2.3E-11 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS11100 4ed06dca19d7857b7c7c1cbe9ee70d5c 156 Gene3D G3DSA:1.10.1660.10 57 123 2.5E-10 T 09-03-2017 NA29_RS11100 4ed06dca19d7857b7c7c1cbe9ee70d5c 156 SUPERFAMILY SSF46955 4 122 5.49E-22 T 09-03-2017 IPR009061 Putative DNA-binding domain NA29_RS11100 4ed06dca19d7857b7c7c1cbe9ee70d5c 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 4.4E-6 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS11100 4ed06dca19d7857b7c7c1cbe9ee70d5c 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 4.4E-6 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS11100 4ed06dca19d7857b7c7c1cbe9ee70d5c 156 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 4.4E-6 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS11100 4ed06dca19d7857b7c7c1cbe9ee70d5c 156 Pfam PF13411 MerR HTH family regulatory protein 5 68 1.2E-12 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS02890 d0288c7fff01422b450e3e841b414b5c 147 Pfam PF04343 Protein of unknown function, DUF488 29 144 5.0E-23 T 09-03-2017 IPR007438 Protein of unknown function DUF488 NA29_RS22065 d615c91b54337a97ce1ec17ba745d98d 359 SUPERFAMILY SSF52540 1 214 5.66E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22065 d615c91b54337a97ce1ec17ba745d98d 359 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 219 319 4.7E-10 T 09-03-2017 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS22065 d615c91b54337a97ce1ec17ba745d98d 359 Gene3D G3DSA:3.40.50.300 1 138 1.2E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22065 d615c91b54337a97ce1ec17ba745d98d 359 Pfam PF06144 DNA polymerase III, delta subunit 20 193 1.5E-21 T 09-03-2017 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 NA29_RS22065 d615c91b54337a97ce1ec17ba745d98d 359 SUPERFAMILY SSF48019 216 343 1.09E-30 T 09-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 NA29_RS22065 d615c91b54337a97ce1ec17ba745d98d 359 Gene3D G3DSA:1.10.8.60 143 226 3.8E-34 T 09-03-2017 NA29_RS22065 d615c91b54337a97ce1ec17ba745d98d 359 Gene3D G3DSA:1.20.272.20 227 344 1.2E-38 T 09-03-2017 NA29_RS22065 d615c91b54337a97ce1ec17ba745d98d 359 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 340 4.1E-85 T 09-03-2017 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 NA29_RS12795 c53d0ab990184c6eeae712def9e551b4 340 Gene3D G3DSA:3.40.50.720 5 182 1.1E-47 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS12795 c53d0ab990184c6eeae712def9e551b4 340 SUPERFAMILY SSF51735 6 339 3.78E-90 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS12795 c53d0ab990184c6eeae712def9e551b4 340 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 154 0.0016 T 09-03-2017 NA29_RS12795 c53d0ab990184c6eeae712def9e551b4 340 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 7 338 2.5E-126 T 09-03-2017 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 NA29_RS12795 c53d0ab990184c6eeae712def9e551b4 340 Gene3D G3DSA:3.90.25.10 183 235 9.7E-48 T 09-03-2017 NA29_RS12795 c53d0ab990184c6eeae712def9e551b4 340 Gene3D G3DSA:3.90.25.10 267 340 9.7E-48 T 09-03-2017 NA29_RS12795 c53d0ab990184c6eeae712def9e551b4 340 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 265 2.4E-52 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NA29_RS07330 f7b29a469c1b6f2b9361ac022f8e64c1 704 Gene3D G3DSA:3.30.870.10 517 699 5.1E-71 T 09-03-2017 NA29_RS07330 f7b29a469c1b6f2b9361ac022f8e64c1 704 SUPERFAMILY SSF56024 518 699 1.5E-67 T 09-03-2017 NA29_RS07330 f7b29a469c1b6f2b9361ac022f8e64c1 704 Gene3D G3DSA:3.30.1840.10 120 313 3.2E-63 T 09-03-2017 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 NA29_RS07330 f7b29a469c1b6f2b9361ac022f8e64c1 704 SUPERFAMILY SSF140356 19 118 1.15E-32 T 09-03-2017 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 NA29_RS07330 f7b29a469c1b6f2b9361ac022f8e64c1 704 PIRSF PIRSF015589 2 704 7.6E-259 T 09-03-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 NA29_RS07330 f7b29a469c1b6f2b9361ac022f8e64c1 704 Pfam PF13089 Polyphosphate kinase N-terminal domain 20 123 7.8E-33 T 09-03-2017 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 NA29_RS07330 f7b29a469c1b6f2b9361ac022f8e64c1 704 Gene3D G3DSA:3.30.870.10 328 516 3.8E-76 T 09-03-2017 NA29_RS07330 f7b29a469c1b6f2b9361ac022f8e64c1 704 SUPERFAMILY SSF143724 121 326 6.08E-61 T 09-03-2017 NA29_RS07330 f7b29a469c1b6f2b9361ac022f8e64c1 704 SUPERFAMILY SSF56024 328 513 6.95E-56 T 09-03-2017 NA29_RS07330 f7b29a469c1b6f2b9361ac022f8e64c1 704 Pfam PF13090 Polyphosphate kinase C-terminal domain 343 694 1.8E-150 T 09-03-2017 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 NA29_RS07330 f7b29a469c1b6f2b9361ac022f8e64c1 704 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 19 694 8.4E-284 T 09-03-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 NA29_RS07330 f7b29a469c1b6f2b9361ac022f8e64c1 704 Hamap MF_00347 Polyphosphate kinase [ppk]. 16 699 31.209 T 09-03-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 NA29_RS07330 f7b29a469c1b6f2b9361ac022f8e64c1 704 Pfam PF02503 Polyphosphate kinase middle domain 133 334 5.9E-57 T 09-03-2017 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 NA29_RS19570 cbc7cd9cbe359d088daf69247686b63e 316 Pfam PF03466 LysR substrate binding domain 89 300 1.6E-44 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS19570 cbc7cd9cbe359d088daf69247686b63e 316 SUPERFAMILY SSF46785 3 112 3.47E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19570 cbc7cd9cbe359d088daf69247686b63e 316 SUPERFAMILY SSF53850 90 306 1.55E-43 T 09-03-2017 NA29_RS19570 cbc7cd9cbe359d088daf69247686b63e 316 Gene3D G3DSA:1.10.10.10 1 83 1.0E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19570 cbc7cd9cbe359d088daf69247686b63e 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.6E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19570 cbc7cd9cbe359d088daf69247686b63e 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.6E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19570 cbc7cd9cbe359d088daf69247686b63e 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.6E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19570 cbc7cd9cbe359d088daf69247686b63e 316 Gene3D G3DSA:3.40.190.10 91 177 2.4E-17 T 09-03-2017 NA29_RS19570 cbc7cd9cbe359d088daf69247686b63e 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.0E-22 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19570 cbc7cd9cbe359d088daf69247686b63e 316 Gene3D G3DSA:3.40.190.10 178 271 6.7E-23 T 09-03-2017 NA29_RS05690 89bbcb0fee37ab27b8288ba59fbbfe4a 218 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 85 203 1.4E-35 T 09-03-2017 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 NA29_RS05690 89bbcb0fee37ab27b8288ba59fbbfe4a 218 SUPERFAMILY SSF48498 84 203 1.75E-15 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS05690 89bbcb0fee37ab27b8288ba59fbbfe4a 218 SUPERFAMILY SSF46689 1 75 5.13E-19 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS05690 89bbcb0fee37ab27b8288ba59fbbfe4a 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 9.4E-11 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS05690 89bbcb0fee37ab27b8288ba59fbbfe4a 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 9.4E-11 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS05690 89bbcb0fee37ab27b8288ba59fbbfe4a 218 Gene3D G3DSA:1.10.357.10 61 206 1.6E-24 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS05690 89bbcb0fee37ab27b8288ba59fbbfe4a 218 Gene3D G3DSA:1.10.10.60 2 60 9.0E-22 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS05690 89bbcb0fee37ab27b8288ba59fbbfe4a 218 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NA29_RS05690 89bbcb0fee37ab27b8288ba59fbbfe4a 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 4.1E-18 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS10970 2d25594791046c7ef4394dfe4a876164 223 Gene3D G3DSA:3.40.30.10 2 87 7.7E-24 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS10970 2d25594791046c7ef4394dfe4a876164 223 SUPERFAMILY SSF47616 85 213 8.91E-20 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS10970 2d25594791046c7ef4394dfe4a876164 223 Pfam PF00043 Glutathione S-transferase, C-terminal domain 144 207 4.2E-6 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal NA29_RS10970 2d25594791046c7ef4394dfe4a876164 223 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 74 3.0E-14 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS10970 2d25594791046c7ef4394dfe4a876164 223 Gene3D G3DSA:1.20.1050.10 88 216 2.9E-18 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS10970 2d25594791046c7ef4394dfe4a876164 223 SUPERFAMILY SSF52833 1 84 3.04E-22 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS03735 8cfe44a49beaae56d440037b50ed1d26 400 Pfam PF02803 Thiolase, C-terminal domain 276 398 3.6E-43 T 09-03-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 NA29_RS03735 8cfe44a49beaae56d440037b50ed1d26 400 PIRSF PIRSF000429 1 400 2.2E-130 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS03735 8cfe44a49beaae56d440037b50ed1d26 400 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 400 5.8E-220 T 09-03-2017 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 NA29_RS03735 8cfe44a49beaae56d440037b50ed1d26 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 09-03-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 NA29_RS03735 8cfe44a49beaae56d440037b50ed1d26 400 Gene3D G3DSA:3.40.47.10 3 125 3.1E-66 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS03735 8cfe44a49beaae56d440037b50ed1d26 400 Gene3D G3DSA:3.40.47.10 200 281 3.1E-66 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS03735 8cfe44a49beaae56d440037b50ed1d26 400 Gene3D G3DSA:3.40.47.10 282 398 1.1E-58 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS03735 8cfe44a49beaae56d440037b50ed1d26 400 Gene3D G3DSA:3.40.47.10 154 199 1.1E-58 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS03735 8cfe44a49beaae56d440037b50ed1d26 400 SUPERFAMILY SSF53901 276 398 2.64E-44 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS03735 8cfe44a49beaae56d440037b50ed1d26 400 SUPERFAMILY SSF53901 3 275 7.07E-77 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS03735 8cfe44a49beaae56d440037b50ed1d26 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 09-03-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 NA29_RS03735 8cfe44a49beaae56d440037b50ed1d26 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 4.1E-132 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS03735 8cfe44a49beaae56d440037b50ed1d26 400 Pfam PF00108 Thiolase, N-terminal domain 4 267 2.0E-73 T 09-03-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 NA29_RS03735 8cfe44a49beaae56d440037b50ed1d26 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 09-03-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 NA29_RS05820 a5bb38c7ddb6e45b2bfadb951d3318f0 222 SUPERFAMILY SSF161098 13 201 7.46E-46 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS05820 a5bb38c7ddb6e45b2bfadb951d3318f0 222 Gene3D G3DSA:1.10.3720.10 10 216 7.5E-53 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS05820 a5bb38c7ddb6e45b2bfadb951d3318f0 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 1.6E-29 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NA29_RS05820 a5bb38c7ddb6e45b2bfadb951d3318f0 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 216 4.3E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS04900 feac5b926fb4522694994f1446782d83 158 SUPERFAMILY SSF55961 4 153 1.24E-44 T 09-03-2017 NA29_RS04900 feac5b926fb4522694994f1446782d83 158 Gene3D G3DSA:3.30.530.20 4 157 4.6E-57 T 09-03-2017 IPR023393 START-like domain NA29_RS04900 feac5b926fb4522694994f1446782d83 158 Pfam PF08982 Domain of unknown function (DUF1857) 9 155 1.6E-33 T 09-03-2017 IPR015075 Protein of unknown function DUF1857 NA29_RS01425 c129cd72a93bc9d573a552cc540508f4 288 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 44 288 2.8E-108 T 09-03-2017 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD NA29_RS01425 c129cd72a93bc9d573a552cc540508f4 288 Gene3D G3DSA:3.40.50.300 44 283 1.7E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01425 c129cd72a93bc9d573a552cc540508f4 288 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 265 287 2.4E-8 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS01425 c129cd72a93bc9d573a552cc540508f4 288 Pfam PF00005 ABC transporter 60 214 1.0E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS01425 c129cd72a93bc9d573a552cc540508f4 288 SUPERFAMILY SSF52540 44 285 1.22E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01425 c129cd72a93bc9d573a552cc540508f4 288 ProSitePatterns PS00211 ABC transporters family signature. 187 201 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS05835 1eafee6e0b346d1f134ece597648465e 190 Pfam PF01625 Peptide methionine sulfoxide reductase 16 167 7.3E-66 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 NA29_RS05835 1eafee6e0b346d1f134ece597648465e 190 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 14 167 3.0E-61 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 NA29_RS05835 1eafee6e0b346d1f134ece597648465e 190 SUPERFAMILY SSF55068 8 179 8.5E-76 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 NA29_RS05835 1eafee6e0b346d1f134ece597648465e 190 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 13 172 38.163 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 NA29_RS05835 1eafee6e0b346d1f134ece597648465e 190 Gene3D G3DSA:3.30.1060.10 4 167 8.8E-75 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 NA29_RS11450 b718b82ac073604c0df801760baf5a7e 559 Gene3D G3DSA:3.40.50.10730 142 349 3.9E-96 T 09-03-2017 NA29_RS11450 b718b82ac073604c0df801760baf5a7e 559 ProSitePatterns PS01233 Urocanase signature. 442 457 - T 09-03-2017 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 NA29_RS11450 b718b82ac073604c0df801760baf5a7e 559 SUPERFAMILY SSF111326 7 556 4.58E-262 T 09-03-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 NA29_RS11450 b718b82ac073604c0df801760baf5a7e 559 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 554 0.0 T 09-03-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 NA29_RS11450 b718b82ac073604c0df801760baf5a7e 559 Hamap MF_00577 Urocanate hydratase [hutU]. 2 556 50.432 T 09-03-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 NA29_RS11450 b718b82ac073604c0df801760baf5a7e 559 Gene3D G3DSA:3.40.1770.10 9 141 1.9E-162 T 09-03-2017 NA29_RS11450 b718b82ac073604c0df801760baf5a7e 559 Gene3D G3DSA:3.40.1770.10 360 555 1.9E-162 T 09-03-2017 NA29_RS11450 b718b82ac073604c0df801760baf5a7e 559 Pfam PF01175 Urocanase 12 547 3.5E-260 T 09-03-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 NA29_RS11450 b718b82ac073604c0df801760baf5a7e 559 PIRSF PIRSF001423 2 559 1.1E-294 T 09-03-2017 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 NA29_RS16635 be09b6690e6bb2b94744f72f307f6816 354 Pfam PF01418 Helix-turn-helix domain, rpiR family 13 80 1.2E-12 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 NA29_RS16635 be09b6690e6bb2b94744f72f307f6816 354 Pfam PF01380 SIS domain 138 261 1.7E-14 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 NA29_RS16635 be09b6690e6bb2b94744f72f307f6816 354 Gene3D G3DSA:3.40.50.10490 112 276 1.0E-21 T 09-03-2017 NA29_RS16635 be09b6690e6bb2b94744f72f307f6816 354 SUPERFAMILY SSF53697 105 270 1.05E-23 T 09-03-2017 NA29_RS16635 be09b6690e6bb2b94744f72f307f6816 354 SUPERFAMILY SSF46689 13 84 2.33E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS16635 be09b6690e6bb2b94744f72f307f6816 354 Gene3D G3DSA:1.10.10.10 13 85 2.2E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 Gene3D G3DSA:3.40.50.620 246 365 1.4E-7 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 Gene3D G3DSA:3.30.450.40 515 660 5.4E-6 T 09-03-2017 IPR029016 GAF domain-like NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 SUPERFAMILY SSF52540 27 173 3.47E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 790 898 1.4E-22 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 SMART SM00388 677 744 5.0E-18 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 Gene3D G3DSA:1.20.120.620 407 511 7.3E-38 T 09-03-2017 NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 SUPERFAMILY SSF47384 669 744 1.12E-17 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 SMART SM00387 788 899 2.7E-34 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 SUPERFAMILY SSF55781 519 673 1.83E-7 T 09-03-2017 IPR029016 GAF domain-like NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 230 8.5E-98 T 09-03-2017 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 Pfam PF00512 His Kinase A (phospho-acceptor) domain 678 744 7.5E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 Gene3D G3DSA:1.10.287.130 673 729 9.5E-24 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 843 853 4.8E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 858 876 4.8E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 883 896 4.8E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 PRINTS PR00344 Bacterial sensor protein C-terminal signature 825 839 4.8E-14 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 Gene3D G3DSA:3.40.50.300 20 229 3.4E-100 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 SUPERFAMILY SSF55874 734 900 2.1E-38 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 Pfam PF13492 GAF domain 539 658 4.5E-13 T 09-03-2017 IPR003018 GAF domain GO:0005515 NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 Pfam PF13493 Domain of unknown function (DUF4118) 411 515 3.0E-31 T 09-03-2017 IPR025201 Sensor protein KdpD, transmembrane domain NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 SUPERFAMILY SSF52402 251 372 3.0E-8 T 09-03-2017 NA29_RS08975 64f0f216a1eb1b446282f25255c8b283 949 Gene3D G3DSA:3.30.565.10 730 898 5.2E-38 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS04450 f2d14a0e0c3cfbc6b3611cc0837720b4 595 SUPERFAMILY SSF47203 288 467 3.06E-50 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS04450 f2d14a0e0c3cfbc6b3611cc0837720b4 595 Gene3D G3DSA:1.10.540.10 38 161 3.3E-18 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS04450 f2d14a0e0c3cfbc6b3611cc0837720b4 595 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 7.9E-14 T 09-03-2017 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria NA29_RS04450 f2d14a0e0c3cfbc6b3611cc0837720b4 595 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 272 4.1E-18 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NA29_RS04450 f2d14a0e0c3cfbc6b3611cc0837720b4 595 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 159 1.7E-12 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS04450 f2d14a0e0c3cfbc6b3611cc0837720b4 595 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 2.4E-20 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS04450 f2d14a0e0c3cfbc6b3611cc0837720b4 595 SUPERFAMILY SSF56645 38 281 1.44E-61 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NA29_RS04450 f2d14a0e0c3cfbc6b3611cc0837720b4 595 Gene3D G3DSA:1.20.140.10 270 466 1.5E-52 T 09-03-2017 NA29_RS04450 f2d14a0e0c3cfbc6b3611cc0837720b4 595 Gene3D G3DSA:2.40.110.10 162 269 7.9E-28 T 09-03-2017 NA29_RS04450 f2d14a0e0c3cfbc6b3611cc0837720b4 595 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 471 591 1.6E-33 T 09-03-2017 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain NA29_RS13895 ccf5d8dc03bd98b7b3863ace6362af13 262 SMART SM00382 25 208 1.0E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS13895 ccf5d8dc03bd98b7b3863ace6362af13 262 SUPERFAMILY SSF52540 1 210 1.65E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13895 ccf5d8dc03bd98b7b3863ace6362af13 262 Gene3D G3DSA:3.40.50.300 1 213 4.6E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13895 ccf5d8dc03bd98b7b3863ace6362af13 262 Pfam PF00005 ABC transporter 16 158 1.2E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS13895 ccf5d8dc03bd98b7b3863ace6362af13 262 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS19100 afb1117916e73c436f356d327ccdb343 182 Gene3D G3DSA:3.90.1340.10 2 66 7.5E-25 T 09-03-2017 IPR011083 Phage tail collar domain NA29_RS19100 afb1117916e73c436f356d327ccdb343 182 SUPERFAMILY SSF88874 3 176 1.7E-40 T 09-03-2017 NA29_RS19100 afb1117916e73c436f356d327ccdb343 182 Pfam PF07484 Phage Tail Collar Domain 7 62 1.9E-23 T 09-03-2017 IPR011083 Phage tail collar domain NA29_RS22915 afd0a9e0af65eff2e8937793eb7fc3a5 171 Pfam PF05433 Glycine zipper 2TM domain 83 122 5.2E-9 T 09-03-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 NA29_RS04320 1bf4caac94d6079111db98d7eba5ca26 128 SUPERFAMILY SSF55298 15 124 1.01E-33 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS04320 1bf4caac94d6079111db98d7eba5ca26 128 Gene3D G3DSA:3.30.1330.40 13 125 3.9E-32 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS04320 1bf4caac94d6079111db98d7eba5ca26 128 Pfam PF01042 Endoribonuclease L-PSP 18 123 1.7E-23 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family NA29_RS13050 1f50a19aab1442cc38816c9d5af6f8d3 64 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 2.8E-20 T 09-03-2017 IPR012451 Protein of unknown function DUF1656 NA29_RS16695 da50d48f81b6a2e4fbf1c4a90bbba53e 368 Pfam PF01266 FAD dependent oxidoreductase 5 363 2.4E-65 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS16695 da50d48f81b6a2e4fbf1c4a90bbba53e 368 SUPERFAMILY SSF51905 273 322 1.51E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS16695 da50d48f81b6a2e4fbf1c4a90bbba53e 368 SUPERFAMILY SSF51905 4 223 1.51E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS16695 da50d48f81b6a2e4fbf1c4a90bbba53e 368 Gene3D G3DSA:3.30.9.10 86 138 2.8E-9 T 09-03-2017 NA29_RS16695 da50d48f81b6a2e4fbf1c4a90bbba53e 368 Gene3D G3DSA:3.50.50.60 3 84 2.2E-27 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS16695 da50d48f81b6a2e4fbf1c4a90bbba53e 368 Gene3D G3DSA:3.50.50.60 139 221 2.2E-27 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS16695 da50d48f81b6a2e4fbf1c4a90bbba53e 368 Gene3D G3DSA:3.50.50.60 325 365 2.2E-27 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS01775 46804140c438b765c40317b2fcf97ce0 378 Gene3D G3DSA:1.10.10.60 98 150 1.3E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS01775 46804140c438b765c40317b2fcf97ce0 378 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 202 276 2.7E-6 T 09-03-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 NA29_RS01775 46804140c438b765c40317b2fcf97ce0 378 Gene3D G3DSA:3.30.160.70 186 278 6.7E-36 T 09-03-2017 NA29_RS01775 46804140c438b765c40317b2fcf97ce0 378 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 330 336 - T 09-03-2017 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 NA29_RS01775 46804140c438b765c40317b2fcf97ce0 378 SUPERFAMILY SSF57884 15 102 1.96E-32 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 NA29_RS01775 46804140c438b765c40317b2fcf97ce0 378 SUPERFAMILY SSF53155 200 278 1.96E-23 T 09-03-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 NA29_RS01775 46804140c438b765c40317b2fcf97ce0 378 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 281 360 2.1E-31 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 NA29_RS01775 46804140c438b765c40317b2fcf97ce0 378 SUPERFAMILY SSF46767 279 360 7.06E-30 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 NA29_RS01775 46804140c438b765c40317b2fcf97ce0 378 Gene3D G3DSA:1.10.10.10 279 361 1.6E-33 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01775 46804140c438b765c40317b2fcf97ce0 378 Gene3D G3DSA:3.40.10.10 15 97 6.5E-33 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 NA29_RS01775 46804140c438b765c40317b2fcf97ce0 378 Pfam PF02805 Metal binding domain of Ada 22 85 3.8E-31 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 NA29_RS01775 46804140c438b765c40317b2fcf97ce0 378 PIRSF PIRSF000409 7 369 9.6E-144 T 09-03-2017 IPR016221 Bifunctional regulatory protein Ada NA29_RS01775 46804140c438b765c40317b2fcf97ce0 378 Pfam PF12833 Helix-turn-helix domain 116 193 3.3E-18 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS01775 46804140c438b765c40317b2fcf97ce0 378 SMART SM00342 110 192 4.1E-15 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS01775 46804140c438b765c40317b2fcf97ce0 378 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 280 359 6.4E-35 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 NA29_RS01775 46804140c438b765c40317b2fcf97ce0 378 SUPERFAMILY SSF46689 97 142 6.36E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS05905 caf3c44acd82e8ccf10519a8660605cf 528 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 31 511 1.2E-106 T 09-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 NA29_RS05905 caf3c44acd82e8ccf10519a8660605cf 528 Gene3D G3DSA:1.20.1250.20 24 205 7.4E-24 T 09-03-2017 NA29_RS05905 caf3c44acd82e8ccf10519a8660605cf 528 Pfam PF07690 Major Facilitator Superfamily 31 424 4.0E-45 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS05905 caf3c44acd82e8ccf10519a8660605cf 528 Gene3D G3DSA:1.20.1250.20 495 520 6.3E-20 T 09-03-2017 NA29_RS05905 caf3c44acd82e8ccf10519a8660605cf 528 Gene3D G3DSA:1.20.1250.20 278 436 6.3E-20 T 09-03-2017 NA29_RS05905 caf3c44acd82e8ccf10519a8660605cf 528 SUPERFAMILY SSF103473 263 434 3.53E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS05905 caf3c44acd82e8ccf10519a8660605cf 528 SUPERFAMILY SSF103473 19 210 3.53E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS05905 caf3c44acd82e8ccf10519a8660605cf 528 SUPERFAMILY SSF103473 494 518 3.53E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS03895 b8bfd7b88d27672e4537be803a919dbb 588 SUPERFAMILY SSF52467 177 361 1.38E-42 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS03895 b8bfd7b88d27672e4537be803a919dbb 588 SUPERFAMILY SSF52518 1 173 5.4E-42 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS03895 b8bfd7b88d27672e4537be803a919dbb 588 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 408 559 4.0E-36 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NA29_RS03895 b8bfd7b88d27672e4537be803a919dbb 588 SUPERFAMILY SSF52518 386 585 1.43E-50 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS03895 b8bfd7b88d27672e4537be803a919dbb 588 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 9.8E-44 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 NA29_RS03895 b8bfd7b88d27672e4537be803a919dbb 588 Gene3D G3DSA:3.40.50.1220 178 331 4.1E-52 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS03895 b8bfd7b88d27672e4537be803a919dbb 588 Gene3D G3DSA:3.40.50.970 350 564 1.5E-54 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS03895 b8bfd7b88d27672e4537be803a919dbb 588 Gene3D G3DSA:3.40.50.970 1 174 2.6E-47 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS03895 b8bfd7b88d27672e4537be803a919dbb 588 TIGRFAM TIGR03457 sulphoacet_xsc: sulfoacetaldehyde acetyltransferase 1 584 0.0 T 09-03-2017 IPR017820 Sulphoacetaldehyde acetyltransferase GO:0000287|GO:0005737|GO:0019529|GO:0030976|GO:0050487 KEGG: 00430+2.3.3.15|MetaCyc: PWY-1281|MetaCyc: PWY-6637 NA29_RS03895 b8bfd7b88d27672e4537be803a919dbb 588 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 323 8.1E-35 T 09-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 NA29_RS19815 1f71c2dc422a1ba6a73d8444d6719680 489 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 22 483 1.1E-76 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NA29_RS19815 1f71c2dc422a1ba6a73d8444d6719680 489 SUPERFAMILY SSF56954 16 45 5.75E-85 T 09-03-2017 NA29_RS19815 1f71c2dc422a1ba6a73d8444d6719680 489 SUPERFAMILY SSF56954 76 485 5.75E-85 T 09-03-2017 NA29_RS19815 1f71c2dc422a1ba6a73d8444d6719680 489 Gene3D G3DSA:1.20.1600.10 75 485 4.1E-84 T 09-03-2017 NA29_RS19815 1f71c2dc422a1ba6a73d8444d6719680 489 Pfam PF02321 Outer membrane efflux protein 85 276 1.6E-18 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS19815 1f71c2dc422a1ba6a73d8444d6719680 489 Pfam PF02321 Outer membrane efflux protein 302 482 2.9E-20 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS09400 350758c1a44c069242ffc34fc221d97d 64 Gene3D G3DSA:2.20.28.10 10 61 2.1E-24 T 09-03-2017 IPR004039 Rubredoxin-type fold NA29_RS09400 350758c1a44c069242ffc34fc221d97d 64 SUPERFAMILY SSF57802 10 62 1.41E-21 T 09-03-2017 NA29_RS09400 350758c1a44c069242ffc34fc221d97d 64 ProSitePatterns PS00202 Rubredoxin signature. 43 53 - T 09-03-2017 IPR018527 Rubredoxin, iron-binding site GO:0046872 NA29_RS09400 350758c1a44c069242ffc34fc221d97d 64 PRINTS PR00163 Rubredoxin signature 43 59 3.9E-8 T 09-03-2017 IPR024935 Rubredoxin domain GO:0005506 NA29_RS09400 350758c1a44c069242ffc34fc221d97d 64 PRINTS PR00163 Rubredoxin signature 13 29 3.9E-8 T 09-03-2017 IPR024935 Rubredoxin domain GO:0005506 NA29_RS09400 350758c1a44c069242ffc34fc221d97d 64 Pfam PF00301 Rubredoxin 14 59 7.2E-22 T 09-03-2017 IPR024935 Rubredoxin domain GO:0005506 NA29_RS01980 c63a92e81dbfdc4e2aff127468f70872 302 PIRSF PIRSF000103 1 293 3.2E-76 T 09-03-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 NA29_RS01980 c63a92e81dbfdc4e2aff127468f70872 302 Gene3D G3DSA:3.40.50.720 1 161 1.0E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS01980 c63a92e81dbfdc4e2aff127468f70872 302 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 283 9.7E-14 T 09-03-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 NA29_RS01980 c63a92e81dbfdc4e2aff127468f70872 302 SUPERFAMILY SSF48179 166 292 1.7E-22 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS01980 c63a92e81dbfdc4e2aff127468f70872 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 156 5.6E-37 T 09-03-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 NA29_RS01980 c63a92e81dbfdc4e2aff127468f70872 302 SUPERFAMILY SSF51735 1 161 2.84E-40 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS01980 c63a92e81dbfdc4e2aff127468f70872 302 Gene3D G3DSA:1.10.1040.10 165 290 2.6E-24 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS01980 c63a92e81dbfdc4e2aff127468f70872 302 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 09-03-2017 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 NA29_RS18325 1af2c3e804c0fab6888ee69b5b6bbe8b 623 Pfam PF02685 Glucokinase 17 325 3.0E-105 T 09-03-2017 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 NA29_RS18325 1af2c3e804c0fab6888ee69b5b6bbe8b 623 SUPERFAMILY SSF46689 338 411 2.51E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS18325 1af2c3e804c0fab6888ee69b5b6bbe8b 623 TIGRFAM TIGR00749 glk: glucokinase 17 320 2.1E-92 T 09-03-2017 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 NA29_RS18325 1af2c3e804c0fab6888ee69b5b6bbe8b 623 SUPERFAMILY SSF53067 19 328 1.81E-57 T 09-03-2017 NA29_RS18325 1af2c3e804c0fab6888ee69b5b6bbe8b 623 Pfam PF01418 Helix-turn-helix domain, rpiR family 340 409 3.3E-17 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 NA29_RS18325 1af2c3e804c0fab6888ee69b5b6bbe8b 623 Gene3D G3DSA:1.10.10.10 338 413 3.5E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18325 1af2c3e804c0fab6888ee69b5b6bbe8b 623 ProSitePatterns PS00356 LacI-type HTH domain signature. 372 390 - T 09-03-2017 NA29_RS18325 1af2c3e804c0fab6888ee69b5b6bbe8b 623 Gene3D G3DSA:3.40.50.10490 440 593 2.1E-33 T 09-03-2017 NA29_RS18325 1af2c3e804c0fab6888ee69b5b6bbe8b 623 Pfam PF01380 SIS domain 460 586 3.6E-18 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 NA29_RS18325 1af2c3e804c0fab6888ee69b5b6bbe8b 623 SUPERFAMILY SSF53697 429 593 4.65E-36 T 09-03-2017 NA29_RS18325 1af2c3e804c0fab6888ee69b5b6bbe8b 623 Gene3D G3DSA:3.40.367.20 112 310 1.1E-67 T 09-03-2017 NA29_RS18325 1af2c3e804c0fab6888ee69b5b6bbe8b 623 Hamap MF_00524 Glucokinase [glk]. 13 327 35.822 T 09-03-2017 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 NA29_RS10635 d9c62f93c724ce8a2f94d52931b4f405 325 Gene3D G3DSA:1.20.58.340 131 246 1.9E-36 T 09-03-2017 NA29_RS10635 d9c62f93c724ce8a2f94d52931b4f405 325 SUPERFAMILY SSF143865 2 258 3.14E-67 T 09-03-2017 NA29_RS10635 d9c62f93c724ce8a2f94d52931b4f405 325 Pfam PF01544 CorA-like Mg2+ transporter protein 31 321 1.5E-66 T 09-03-2017 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 NA29_RS10635 d9c62f93c724ce8a2f94d52931b4f405 325 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 31 325 4.1E-64 T 09-03-2017 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 NA29_RS10635 d9c62f93c724ce8a2f94d52931b4f405 325 Gene3D G3DSA:3.30.460.20 3 130 2.2E-33 T 09-03-2017 NA29_RS10635 d9c62f93c724ce8a2f94d52931b4f405 325 Gene3D G3DSA:1.20.58.340 250 325 1.8E-21 T 09-03-2017 NA29_RS10635 d9c62f93c724ce8a2f94d52931b4f405 325 SUPERFAMILY SSF144083 262 322 2.22E-16 T 09-03-2017 NA29_RS16000 dc47812e6986f75f54b12660ff459f42 304 Pfam PF03466 LysR substrate binding domain 104 291 4.6E-30 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS16000 dc47812e6986f75f54b12660ff459f42 304 SUPERFAMILY SSF53850 104 295 1.99E-36 T 09-03-2017 NA29_RS16000 dc47812e6986f75f54b12660ff459f42 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 78 9.1E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16000 dc47812e6986f75f54b12660ff459f42 304 Gene3D G3DSA:3.40.190.10 205 251 1.7E-5 T 09-03-2017 NA29_RS16000 dc47812e6986f75f54b12660ff459f42 304 Gene3D G3DSA:1.10.10.10 16 95 5.6E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16000 dc47812e6986f75f54b12660ff459f42 304 SUPERFAMILY SSF46785 13 126 1.13E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16000 dc47812e6986f75f54b12660ff459f42 304 Gene3D G3DSA:3.40.190.10 106 190 1.7E-17 T 09-03-2017 NA29_RS02120 e615944ddaa6f372b05a639300c96c9c 913 Pfam PF00809 Pterin binding enzyme 33 271 1.2E-60 T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS02120 e615944ddaa6f372b05a639300c96c9c 913 SUPERFAMILY SSF47644 322 413 1.44E-26 T 09-03-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS02120 e615944ddaa6f372b05a639300c96c9c 913 Gene3D G3DSA:3.20.20.20 29 309 1.0E-117 T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS02120 e615944ddaa6f372b05a639300c96c9c 913 Gene3D G3DSA:3.40.50.280 425 580 9.7E-65 T 09-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 NA29_RS02120 e615944ddaa6f372b05a639300c96c9c 913 Pfam PF02310 B12 binding domain 429 522 2.0E-17 T 09-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 NA29_RS02120 e615944ddaa6f372b05a639300c96c9c 913 SUPERFAMILY SSF56507 586 912 1.31E-121 T 09-03-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS02120 e615944ddaa6f372b05a639300c96c9c 913 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 622 898 1.2E-115 T 09-03-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS02120 e615944ddaa6f372b05a639300c96c9c 913 SMART SM01018 327 414 1.6E-41 T 09-03-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS02120 e615944ddaa6f372b05a639300c96c9c 913 PIRSF PIRSF000381 2 885 0.0 T 09-03-2017 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS02120 e615944ddaa6f372b05a639300c96c9c 913 SUPERFAMILY SSF51717 29 303 1.16E-90 T 09-03-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS02120 e615944ddaa6f372b05a639300c96c9c 913 TIGRFAM TIGR02082 metH: methionine synthase 11 882 0.0 T 09-03-2017 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS02120 e615944ddaa6f372b05a639300c96c9c 913 Gene3D G3DSA:3.10.196.10 642 912 1.6E-97 T 09-03-2017 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS02120 e615944ddaa6f372b05a639300c96c9c 913 Gene3D G3DSA:1.10.1240.10 320 411 1.2E-36 T 09-03-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS02120 e615944ddaa6f372b05a639300c96c9c 913 Pfam PF02607 B12 binding domain 330 406 4.1E-25 T 09-03-2017 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS02120 e615944ddaa6f372b05a639300c96c9c 913 SUPERFAMILY SSF52242 423 579 4.58E-44 T 09-03-2017 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 NA29_RS25185 542b3498b3a1528f0fe5c91003c307af 257 SUPERFAMILY SSF52540 18 248 5.23E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25185 542b3498b3a1528f0fe5c91003c307af 257 Gene3D G3DSA:3.40.50.300 18 244 6.6E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25185 542b3498b3a1528f0fe5c91003c307af 257 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS25185 542b3498b3a1528f0fe5c91003c307af 257 Pfam PF00005 ABC transporter 35 184 1.1E-24 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS25185 542b3498b3a1528f0fe5c91003c307af 257 SMART SM00382 44 217 2.2E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS15915 651df7cc52e8a5021e7703e95d0abaf0 253 Pfam PF01925 Sulfite exporter TauE/SafE 13 241 1.6E-25 T 09-03-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 NA29_RS14880 19e8f5ce3e87133a2a1e75b582f139d7 191 Gene3D G3DSA:1.10.10.10 81 164 4.1E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14880 19e8f5ce3e87133a2a1e75b582f139d7 191 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 83 162 5.8E-32 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 NA29_RS14880 19e8f5ce3e87133a2a1e75b582f139d7 191 SUPERFAMILY SSF53155 8 86 2.35E-18 T 09-03-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 NA29_RS14880 19e8f5ce3e87133a2a1e75b582f139d7 191 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 82 161 3.9E-33 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 NA29_RS14880 19e8f5ce3e87133a2a1e75b582f139d7 191 SUPERFAMILY SSF46767 81 163 8.89E-31 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 NA29_RS14880 19e8f5ce3e87133a2a1e75b582f139d7 191 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 132 138 - T 09-03-2017 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 NA29_RS14880 19e8f5ce3e87133a2a1e75b582f139d7 191 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 164 35.826 T 09-03-2017 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 NA29_RS17470 2eb531155bada951c75b35f743b6ee0d 378 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 12 375 1.3E-153 T 09-03-2017 IPR007434 Peptidogalycan biosysnthesis/recognition NA29_RS17470 2eb531155bada951c75b35f743b6ee0d 378 SUPERFAMILY SSF55729 177 345 2.54E-36 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS17470 2eb531155bada951c75b35f743b6ee0d 378 Gene3D G3DSA:3.40.630.30 177 329 4.8E-29 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS02520 5829c6353300703e13068dee3fd8b3f3 304 SUPERFAMILY SSF75516 14 146 3.79E-29 T 09-03-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain NA29_RS02520 5829c6353300703e13068dee3fd8b3f3 304 Gene3D G3DSA:1.10.10.10 218 274 3.2E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS02520 5829c6353300703e13068dee3fd8b3f3 304 Pfam PF03472 Autoinducer binding domain 28 145 2.3E-26 T 09-03-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain NA29_RS02520 5829c6353300703e13068dee3fd8b3f3 304 Pfam PF00196 Bacterial regulatory proteins, luxR family 214 269 9.0E-18 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS02520 5829c6353300703e13068dee3fd8b3f3 304 Gene3D G3DSA:3.30.450.80 12 217 4.4E-27 T 09-03-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain NA29_RS02520 5829c6353300703e13068dee3fd8b3f3 304 SMART SM00421 212 269 5.7E-17 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS02520 5829c6353300703e13068dee3fd8b3f3 304 SUPERFAMILY SSF46894 196 276 4.08E-18 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS01110 af6f4c7ba356cfc749c0c1206e4e6fdf 676 Pfam PF00593 TonB dependent receptor 426 674 5.1E-23 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS01110 af6f4c7ba356cfc749c0c1206e4e6fdf 676 Gene3D G3DSA:2.40.170.20 154 676 1.4E-65 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS01110 af6f4c7ba356cfc749c0c1206e4e6fdf 676 SUPERFAMILY SSF56935 37 676 5.49E-91 T 09-03-2017 NA29_RS01110 af6f4c7ba356cfc749c0c1206e4e6fdf 676 Gene3D G3DSA:2.170.130.10 27 153 1.8E-27 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS01110 af6f4c7ba356cfc749c0c1206e4e6fdf 676 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 152 7.5E-17 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS00240 587b88304ee2aade6cb07a95e21b4c81 219 SUPERFAMILY SSF46689 30 94 3.44E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS00240 587b88304ee2aade6cb07a95e21b4c81 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 45 8.5E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS00240 587b88304ee2aade6cb07a95e21b4c81 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 53 76 8.5E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS00240 587b88304ee2aade6cb07a95e21b4c81 219 Gene3D G3DSA:1.10.357.10 13 218 1.1E-36 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS00240 587b88304ee2aade6cb07a95e21b4c81 219 SUPERFAMILY SSF48498 101 198 9.39E-8 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS00240 587b88304ee2aade6cb07a95e21b4c81 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 77 2.8E-14 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS18950 f65a7e8089fd6b36ef5323f2d620d231 444 SUPERFAMILY SSF103473 34 434 3.4E-41 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS18950 f65a7e8089fd6b36ef5323f2d620d231 444 Pfam PF07690 Major Facilitator Superfamily 81 404 1.6E-18 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS18950 f65a7e8089fd6b36ef5323f2d620d231 444 Gene3D G3DSA:1.20.1250.20 268 432 1.1E-7 T 09-03-2017 NA29_RS18950 f65a7e8089fd6b36ef5323f2d620d231 444 Gene3D G3DSA:1.20.1250.20 49 233 2.1E-16 T 09-03-2017 NA29_RS18950 f65a7e8089fd6b36ef5323f2d620d231 444 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 332 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS18245 801a63790ecb04228ee54af588480c67 185 Pfam PF07883 Cupin domain 88 157 3.7E-11 T 09-03-2017 IPR013096 Cupin 2, conserved barrel NA29_RS18245 801a63790ecb04228ee54af588480c67 185 Gene3D G3DSA:2.60.120.10 40 178 3.0E-18 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS18245 801a63790ecb04228ee54af588480c67 185 SUPERFAMILY SSF51182 16 174 5.35E-24 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS08690 18a9b7b519d2ee629ff8c5f0e328f775 206 Gene3D G3DSA:3.30.420.10 3 168 4.8E-51 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS08690 18a9b7b519d2ee629ff8c5f0e328f775 206 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 172 2.1E-21 T 09-03-2017 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS08690 18a9b7b519d2ee629ff8c5f0e328f775 206 SMART SM00479 3 170 1.9E-30 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III NA29_RS08690 18a9b7b519d2ee629ff8c5f0e328f775 206 SUPERFAMILY SSF53098 2 177 4.75E-49 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS08690 18a9b7b519d2ee629ff8c5f0e328f775 206 Pfam PF00929 Exonuclease 6 159 1.4E-25 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III NA29_RS04825 99ca8b93aca916fb8f988542ccfe9005 231 Pfam PF01292 Prokaryotic cytochrome b561 7 183 2.6E-15 T 09-03-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 NA29_RS04825 99ca8b93aca916fb8f988542ccfe9005 231 SUPERFAMILY SSF81342 1 188 2.28E-32 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 NA29_RS16470 a64d65669651c41181d052c81343c321 448 TIGRFAM TIGR04259 oxa_formateAnti: oxalate/formate antiporter 22 423 7.1E-193 T 09-03-2017 IPR026355 Oxalate/formate antiporter GO:0005215|GO:0006810|GO:0016021 NA29_RS16470 a64d65669651c41181d052c81343c321 448 Gene3D G3DSA:1.20.1250.20 22 205 5.8E-25 T 09-03-2017 NA29_RS16470 a64d65669651c41181d052c81343c321 448 Gene3D G3DSA:1.20.1250.20 226 424 5.4E-20 T 09-03-2017 NA29_RS16470 a64d65669651c41181d052c81343c321 448 Pfam PF07690 Major Facilitator Superfamily 30 279 5.9E-25 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS16470 a64d65669651c41181d052c81343c321 448 SUPERFAMILY SSF103473 16 420 1.16E-54 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS18115 edd589929c54f1ec4574b63b750b410c 514 SUPERFAMILY SSF56601 33 195 1.04E-16 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS18115 edd589929c54f1ec4574b63b750b410c 514 Gene3D G3DSA:3.40.710.10 46 192 6.8E-18 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS18115 edd589929c54f1ec4574b63b750b410c 514 Gene3D G3DSA:3.40.710.10 259 380 4.2E-11 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS18115 edd589929c54f1ec4574b63b750b410c 514 SUPERFAMILY SSF56601 259 379 2.25E-8 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS18115 edd589929c54f1ec4574b63b750b410c 514 Pfam PF04960 Glutaminase 259 380 4.2E-10 T 09-03-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 NA29_RS18115 edd589929c54f1ec4574b63b750b410c 514 Pfam PF04960 Glutaminase 64 218 2.5E-17 T 09-03-2017 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 NA29_RS04565 0e2a3cefb050bcf156424038722ecb5a 414 Gene3D G3DSA:3.40.50.620 24 246 2.7E-79 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS04565 0e2a3cefb050bcf156424038722ecb5a 414 Pfam PF13275 S4 domain 350 401 1.4E-6 T 09-03-2017 NA29_RS04565 0e2a3cefb050bcf156424038722ecb5a 414 Gene3D G3DSA:3.10.290.10 345 413 4.6E-26 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS04565 0e2a3cefb050bcf156424038722ecb5a 414 Pfam PF00579 tRNA synthetases class I (W and Y) 51 333 1.6E-74 T 09-03-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS04565 0e2a3cefb050bcf156424038722ecb5a 414 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 17 413 47.863 T 09-03-2017 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 NA29_RS04565 0e2a3cefb050bcf156424038722ecb5a 414 SUPERFAMILY SSF55174 335 410 4.06E-19 T 09-03-2017 NA29_RS04565 0e2a3cefb050bcf156424038722ecb5a 414 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 23 412 3.5E-121 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 NA29_RS04565 0e2a3cefb050bcf156424038722ecb5a 414 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 61 71 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS04565 0e2a3cefb050bcf156424038722ecb5a 414 SUPERFAMILY SSF52374 25 332 9.58E-91 T 09-03-2017 NA29_RS04565 0e2a3cefb050bcf156424038722ecb5a 414 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 197 219 4.8E-25 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 NA29_RS04565 0e2a3cefb050bcf156424038722ecb5a 414 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 65 87 4.8E-25 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 NA29_RS04565 0e2a3cefb050bcf156424038722ecb5a 414 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 180 195 4.8E-25 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 NA29_RS04565 0e2a3cefb050bcf156424038722ecb5a 414 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 230 242 4.8E-25 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 NA29_RS04565 0e2a3cefb050bcf156424038722ecb5a 414 SMART SM00363 353 414 6.7E-5 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS04565 0e2a3cefb050bcf156424038722ecb5a 414 Gene3D G3DSA:1.10.240.10 247 344 2.4E-35 T 09-03-2017 NA29_RS06390 2c7c9fbc54dc5e7662fe34943cf6d83a 208 SUPERFAMILY SSF81452 13 206 2.09E-57 T 09-03-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06390 2c7c9fbc54dc5e7662fe34943cf6d83a 208 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 29 208 2.8E-83 T 09-03-2017 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 NA29_RS06390 2c7c9fbc54dc5e7662fe34943cf6d83a 208 Gene3D G3DSA:1.20.120.80 29 206 3.3E-51 T 09-03-2017 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06390 2c7c9fbc54dc5e7662fe34943cf6d83a 208 Pfam PF00510 Cytochrome c oxidase subunit III 30 206 2.3E-15 T 09-03-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS07795 1677050dd4bb298630e10ae357ae0c3a 422 Gene3D G3DSA:3.40.1060.10 150 239 2.6E-29 T 09-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS07795 1677050dd4bb298630e10ae357ae0c3a 422 PRINTS PR00415 Aconitase family signature 128 143 1.4E-22 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS07795 1677050dd4bb298630e10ae357ae0c3a 422 PRINTS PR00415 Aconitase family signature 190 203 1.4E-22 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS07795 1677050dd4bb298630e10ae357ae0c3a 422 PRINTS PR00415 Aconitase family signature 103 111 1.4E-22 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS07795 1677050dd4bb298630e10ae357ae0c3a 422 PRINTS PR00415 Aconitase family signature 272 286 1.4E-22 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS07795 1677050dd4bb298630e10ae357ae0c3a 422 PRINTS PR00415 Aconitase family signature 114 127 1.4E-22 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS07795 1677050dd4bb298630e10ae357ae0c3a 422 PRINTS PR00415 Aconitase family signature 204 217 1.4E-22 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS07795 1677050dd4bb298630e10ae357ae0c3a 422 PRINTS PR00415 Aconitase family signature 354 367 1.4E-22 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS07795 1677050dd4bb298630e10ae357ae0c3a 422 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 5 419 1.1E-123 T 09-03-2017 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 NA29_RS07795 1677050dd4bb298630e10ae357ae0c3a 422 Gene3D G3DSA:3.30.499.10 4 149 1.1E-24 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS07795 1677050dd4bb298630e10ae357ae0c3a 422 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 6 418 2.4E-124 T 09-03-2017 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 NA29_RS07795 1677050dd4bb298630e10ae357ae0c3a 422 SUPERFAMILY SSF53732 3 421 3.01E-123 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS07795 1677050dd4bb298630e10ae357ae0c3a 422 Gene3D G3DSA:3.30.499.10 276 421 2.1E-47 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS07795 1677050dd4bb298630e10ae357ae0c3a 422 Pfam PF00330 Aconitase family (aconitate hydratase) 31 412 1.5E-85 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS19605 03bf2a9fe79e1b3b017ea35f8703c699 453 SMART SM00116 223 272 35.0 T 09-03-2017 IPR000644 CBS domain NA29_RS19605 03bf2a9fe79e1b3b017ea35f8703c699 453 SMART SM00116 290 338 0.018 T 09-03-2017 IPR000644 CBS domain NA29_RS19605 03bf2a9fe79e1b3b017ea35f8703c699 453 SMART SM01091 351 431 5.3E-28 T 09-03-2017 IPR005170 Transporter-associated domain NA29_RS19605 03bf2a9fe79e1b3b017ea35f8703c699 453 Pfam PF00571 CBS domain 289 338 3.3E-6 T 09-03-2017 IPR000644 CBS domain NA29_RS19605 03bf2a9fe79e1b3b017ea35f8703c699 453 SUPERFAMILY SSF54631 201 340 1.42E-23 T 09-03-2017 NA29_RS19605 03bf2a9fe79e1b3b017ea35f8703c699 453 SUPERFAMILY SSF56176 349 433 2.54E-22 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS19605 03bf2a9fe79e1b3b017ea35f8703c699 453 Pfam PF03471 Transporter associated domain 352 429 4.7E-21 T 09-03-2017 IPR005170 Transporter-associated domain NA29_RS19605 03bf2a9fe79e1b3b017ea35f8703c699 453 Pfam PF01595 Domain of unknown function DUF21 10 199 6.1E-37 T 09-03-2017 IPR002550 Domain of unknown function DUF21 NA29_RS19605 03bf2a9fe79e1b3b017ea35f8703c699 453 Gene3D G3DSA:3.10.580.10 202 341 2.1E-13 T 09-03-2017 NA29_RS19605 03bf2a9fe79e1b3b017ea35f8703c699 453 Gene3D G3DSA:3.30.465.10 345 430 4.6E-27 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS18385 7e82da136e6782eee3866f1b2111d8d9 434 Gene3D G3DSA:3.90.1150.10 327 430 3.3E-39 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS18385 7e82da136e6782eee3866f1b2111d8d9 434 Gene3D G3DSA:3.90.1150.10 4 72 3.3E-39 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS18385 7e82da136e6782eee3866f1b2111d8d9 434 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 433 101.684 T 09-03-2017 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 NA29_RS18385 7e82da136e6782eee3866f1b2111d8d9 434 Pfam PF00202 Aminotransferase class-III 35 405 3.1E-75 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS18385 7e82da136e6782eee3866f1b2111d8d9 434 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 278 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS18385 7e82da136e6782eee3866f1b2111d8d9 434 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 9 431 1.7E-182 T 09-03-2017 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 NA29_RS18385 7e82da136e6782eee3866f1b2111d8d9 434 Gene3D G3DSA:3.40.640.10 73 324 6.5E-77 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS18385 7e82da136e6782eee3866f1b2111d8d9 434 SUPERFAMILY SSF53383 5 431 8.35E-124 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS04725 d1d6d08ccf12b39ba027512b47fdf325 160 Gene3D G3DSA:3.30.1460.10 26 156 1.0E-26 T 09-03-2017 NA29_RS04725 d1d6d08ccf12b39ba027512b47fdf325 160 SUPERFAMILY SSF69635 24 156 3.77E-24 T 09-03-2017 NA29_RS04725 d1d6d08ccf12b39ba027512b47fdf325 160 PRINTS PR01305 Invasion protein B family signature 54 64 5.9E-10 T 09-03-2017 IPR003065 Surface presentation of antigens protein SpaK NA29_RS04725 d1d6d08ccf12b39ba027512b47fdf325 160 PRINTS PR01305 Invasion protein B family signature 136 148 5.9E-10 T 09-03-2017 IPR003065 Surface presentation of antigens protein SpaK NA29_RS04725 d1d6d08ccf12b39ba027512b47fdf325 160 PRINTS PR01305 Invasion protein B family signature 64 78 5.9E-10 T 09-03-2017 IPR003065 Surface presentation of antigens protein SpaK NA29_RS04725 d1d6d08ccf12b39ba027512b47fdf325 160 PRINTS PR01305 Invasion protein B family signature 123 136 5.9E-10 T 09-03-2017 IPR003065 Surface presentation of antigens protein SpaK NA29_RS04725 d1d6d08ccf12b39ba027512b47fdf325 160 PRINTS PR01305 Invasion protein B family signature 41 54 5.9E-10 T 09-03-2017 IPR003065 Surface presentation of antigens protein SpaK NA29_RS04725 d1d6d08ccf12b39ba027512b47fdf325 160 Pfam PF03519 Invasion protein B family 41 120 5.4E-23 T 09-03-2017 IPR003065 Surface presentation of antigens protein SpaK NA29_RS21990 b0eebe5f314c4565f8795a25620a91c4 787 Gene3D G3DSA:2.60.450.10 185 220 4.0E-7 T 09-03-2017 NA29_RS21990 b0eebe5f314c4565f8795a25620a91c4 787 Gene3D G3DSA:2.60.450.10 77 151 4.0E-7 T 09-03-2017 NA29_RS21990 b0eebe5f314c4565f8795a25620a91c4 787 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 25 755 19.453 T 09-03-2017 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 NA29_RS21990 b0eebe5f314c4565f8795a25620a91c4 787 Pfam PF04453 Organic solvent tolerance protein 320 694 1.5E-86 T 09-03-2017 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 NA29_RS17250 92fb36155716504f74c9af0b080685fc 485 PIRSF PIRSF012702 1 484 4.7E-166 T 09-03-2017 IPR009197 Microcystin LR degradation protein MlrC NA29_RS17250 92fb36155716504f74c9af0b080685fc 485 Pfam PF07171 MlrC C-terminus 297 471 3.7E-49 T 09-03-2017 IPR010799 Microcystin LR degradation protein MlrC, C-terminal NA29_RS17250 92fb36155716504f74c9af0b080685fc 485 Pfam PF07364 Metallopeptidase family M81 2 287 1.1E-89 T 09-03-2017 IPR015995 Microcystin LR degradation protein MlrC, N-terminal NA29_RS11545 39243aa5ab1c2b087b7db2b3833eab67 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 240 3.4E-52 T 09-03-2017 NA29_RS11545 39243aa5ab1c2b087b7db2b3833eab67 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.4E-36 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11545 39243aa5ab1c2b087b7db2b3833eab67 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.4E-36 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11545 39243aa5ab1c2b087b7db2b3833eab67 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.4E-36 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11545 39243aa5ab1c2b087b7db2b3833eab67 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 5.4E-36 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11545 39243aa5ab1c2b087b7db2b3833eab67 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.4E-36 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11545 39243aa5ab1c2b087b7db2b3833eab67 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 5.4E-36 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11545 39243aa5ab1c2b087b7db2b3833eab67 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 6.2E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11545 39243aa5ab1c2b087b7db2b3833eab67 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.2E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11545 39243aa5ab1c2b087b7db2b3833eab67 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.2E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11545 39243aa5ab1c2b087b7db2b3833eab67 244 Gene3D G3DSA:3.40.50.720 5 242 5.4E-75 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11545 39243aa5ab1c2b087b7db2b3833eab67 244 SUPERFAMILY SSF51735 4 242 2.36E-70 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS15950 7fa21c86efa349305ce55943a24d746b 224 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 209 4.1E-42 T 09-03-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 NA29_RS15950 7fa21c86efa349305ce55943a24d746b 224 TIGRFAM TIGR02796 tolQ: protein TolQ 7 221 2.2E-87 T 09-03-2017 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 SUPERFAMILY SSF48452 126 253 2.16E-18 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 Pfam PF13191 AAA ATPase domain 442 607 6.1E-19 T 09-03-2017 NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 SUPERFAMILY SSF48452 939 1069 2.71E-9 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 SMART SM00028 168 201 35.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 SMART SM00028 817 850 300.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 SMART SM00028 943 976 12.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 SUPERFAMILY SSF52540 432 517 4.98E-14 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 SUPERFAMILY SSF52540 572 678 4.98E-14 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 Gene3D G3DSA:3.40.50.300 542 612 2.8E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 Gene3D G3DSA:3.40.50.300 437 505 2.8E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 Pfam PF03704 Bacterial transcriptional activator domain 99 248 3.8E-19 T 09-03-2017 IPR005158 Bacterial transcriptional activator domain NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 SMART SM01043 98 252 4.5E-26 T 09-03-2017 IPR005158 Bacterial transcriptional activator domain NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 SUPERFAMILY SSF48452 892 976 1.06E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 SUPERFAMILY SSF48452 817 851 1.06E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 Gene3D G3DSA:1.25.40.10 174 231 6.6E-5 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 Gene3D G3DSA:1.25.40.10 1107 1193 1.3E-12 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 Gene3D G3DSA:1.25.40.10 822 852 1.3E-12 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 Gene3D G3DSA:1.25.40.10 900 1068 1.3E-12 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS00600 fb88269c59ee3bb6b6e7322942d1dd96 1258 SUPERFAMILY SSF55073 257 435 2.35E-13 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS01565 52c427280889b574f880fab9bf0dcd40 141 Pfam PF11528 Protein of unknown function (DUF3224) 5 128 2.9E-39 T 09-03-2017 IPR021607 Protein of unknown function DUF3224 NA29_RS01565 52c427280889b574f880fab9bf0dcd40 141 SUPERFAMILY SSF159238 3 131 5.89E-38 T 09-03-2017 IPR023159 SO1590-like domain NA29_RS01565 52c427280889b574f880fab9bf0dcd40 141 Gene3D G3DSA:2.40.350.10 3 134 1.1E-46 T 09-03-2017 IPR023159 SO1590-like domain NA29_RS21210 2bc8b059b1ba5b0b684754922bd7fe65 225 Gene3D G3DSA:1.20.120.530 62 200 1.5E-22 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS21210 2bc8b059b1ba5b0b684754922bd7fe65 225 Pfam PF07729 FCD domain 70 191 1.7E-14 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS21210 2bc8b059b1ba5b0b684754922bd7fe65 225 SMART SM00345 1 59 4.0E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS21210 2bc8b059b1ba5b0b684754922bd7fe65 225 SMART SM00895 69 192 2.6E-8 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS21210 2bc8b059b1ba5b0b684754922bd7fe65 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 1 59 6.0E-13 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS21210 2bc8b059b1ba5b0b684754922bd7fe65 225 SUPERFAMILY SSF46785 1 69 5.81E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21210 2bc8b059b1ba5b0b684754922bd7fe65 225 SUPERFAMILY SSF48008 64 198 2.04E-19 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS21210 2bc8b059b1ba5b0b684754922bd7fe65 225 Gene3D G3DSA:1.10.10.10 1 59 2.6E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS25280 c42ed7c4b406b3a56cdcc42c968395d3 753 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 26 644 3.5E-182 T 09-03-2017 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 NA29_RS25280 c42ed7c4b406b3a56cdcc42c968395d3 753 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 658 735 3.0E-20 T 09-03-2017 IPR009647 Penicillin-binding, C-terminal NA29_RS25280 c42ed7c4b406b3a56cdcc42c968395d3 753 Pfam PF00905 Penicillin binding protein transpeptidase domain 306 597 6.9E-16 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NA29_RS25280 c42ed7c4b406b3a56cdcc42c968395d3 753 Gene3D G3DSA:3.40.710.10 265 642 1.5E-78 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS25280 c42ed7c4b406b3a56cdcc42c968395d3 753 Gene3D G3DSA:1.10.3810.10 50 212 1.5E-42 T 09-03-2017 NA29_RS25280 c42ed7c4b406b3a56cdcc42c968395d3 753 SUPERFAMILY SSF53955 36 204 2.56E-42 T 09-03-2017 IPR023346 Lysozyme-like domain NA29_RS25280 c42ed7c4b406b3a56cdcc42c968395d3 753 SUPERFAMILY SSF56601 210 223 1.62E-85 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS25280 c42ed7c4b406b3a56cdcc42c968395d3 753 SUPERFAMILY SSF56601 507 641 1.62E-85 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS25280 c42ed7c4b406b3a56cdcc42c968395d3 753 SUPERFAMILY SSF56601 253 478 1.62E-85 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS25280 c42ed7c4b406b3a56cdcc42c968395d3 753 Pfam PF00912 Transglycosylase 44 219 1.2E-43 T 09-03-2017 IPR001264 Glycosyl transferase, family 51 NA29_RS03270 5c36d76efb4413cb6a3dcc41a62f4cfe 100 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 90 2.2E-8 T 09-03-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family NA29_RS03270 5c36d76efb4413cb6a3dcc41a62f4cfe 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 90 5.4E-13 T 09-03-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family NA29_RS11345 a4eb88f2c2090f0f376a9ba3f5b3c239 147 Pfam PF02082 Transcriptional regulator 1 81 1.3E-21 T 09-03-2017 IPR000944 Transcription regulator Rrf2-type NA29_RS11345 a4eb88f2c2090f0f376a9ba3f5b3c239 147 SUPERFAMILY SSF46785 4 136 1.56E-30 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11345 a4eb88f2c2090f0f376a9ba3f5b3c239 147 Gene3D G3DSA:1.10.10.10 1 140 5.2E-44 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 SUPERFAMILY SSF55874 491 649 4.32E-38 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 Gene3D G3DSA:3.40.50.2300 675 815 2.3E-26 T 09-03-2017 NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 535 649 3.9E-26 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 591 2.8E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 628 2.8E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 647 2.8E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 605 2.8E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 Pfam PF07695 7TM diverse intracellular signalling 173 367 1.5E-12 T 09-03-2017 IPR011623 7TM-DISM receptor, extracellular domain, type 1 NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 SUPERFAMILY SSF47384 410 483 7.65E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 Gene3D G3DSA:3.30.565.10 491 654 6.2E-40 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 Pfam PF00512 His Kinase A (phospho-acceptor) domain 425 483 4.1E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 Gene3D G3DSA:1.10.287.130 420 483 2.4E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 SUPERFAMILY SSF52172 674 812 7.26E-27 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 Pfam PF00072 Response regulator receiver domain 678 794 1.1E-14 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 SMART SM00448 676 794 3.7E-18 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 Pfam PF07696 7TMR-DISM extracellular 2 27 159 6.1E-22 T 09-03-2017 IPR011622 7TM-DISM receptor, extracellular domain, type 2 NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 SMART SM00387 534 650 3.3E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS21225 6ae90afa7d52204908c91c87fe0c7589 880 SMART SM00388 425 488 5.6E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS03750 570a9230227f7018fd3fa4fbf666d9a5 266 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 18 263 3.5E-105 T 09-03-2017 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 NA29_RS03750 570a9230227f7018fd3fa4fbf666d9a5 266 Pfam PF01614 Bacterial transcriptional regulator 136 262 5.4E-39 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS03750 570a9230227f7018fd3fa4fbf666d9a5 266 SMART SM00346 21 109 5.8E-24 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS03750 570a9230227f7018fd3fa4fbf666d9a5 266 SUPERFAMILY SSF46785 21 93 9.1E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03750 570a9230227f7018fd3fa4fbf666d9a5 266 Pfam PF09339 IclR helix-turn-helix domain 25 73 4.4E-13 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS03750 570a9230227f7018fd3fa4fbf666d9a5 266 SUPERFAMILY SSF55781 86 263 3.86E-52 T 09-03-2017 IPR029016 GAF domain-like NA29_RS03750 570a9230227f7018fd3fa4fbf666d9a5 266 Gene3D G3DSA:1.10.10.10 11 80 1.9E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03750 570a9230227f7018fd3fa4fbf666d9a5 266 Gene3D G3DSA:3.30.450.40 87 263 2.4E-59 T 09-03-2017 IPR029016 GAF domain-like NA29_RS19795 8a92d4926891941ed8b2361e13822c58 285 SUPERFAMILY SSF52172 2 125 7.68E-41 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS19795 8a92d4926891941ed8b2361e13822c58 285 Pfam PF00072 Response regulator receiver domain 5 114 5.5E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS19795 8a92d4926891941ed8b2361e13822c58 285 SMART SM00448 3 114 4.2E-40 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS19795 8a92d4926891941ed8b2361e13822c58 285 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 7.2E-18 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS19795 8a92d4926891941ed8b2361e13822c58 285 SMART SM00862 153 229 2.7E-15 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS19795 8a92d4926891941ed8b2361e13822c58 285 Gene3D G3DSA:1.10.10.10 131 231 2.2E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19795 8a92d4926891941ed8b2361e13822c58 285 SUPERFAMILY SSF46894 132 230 1.59E-22 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS19795 8a92d4926891941ed8b2361e13822c58 285 Gene3D G3DSA:3.40.50.2300 3 122 1.4E-41 T 09-03-2017 NA29_RS13930 4b159c89bdbca2b948945f089352df20 286 Gene3D G3DSA:3.90.850.10 71 279 4.2E-83 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS13930 4b159c89bdbca2b948945f089352df20 286 SUPERFAMILY SSF56529 60 279 1.7E-79 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS13930 4b159c89bdbca2b948945f089352df20 286 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 73 277 5.6E-68 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS19285 5806a53f02f64357aac0b63833913ab5 290 SUPERFAMILY SSF53850 91 285 4.71E-21 T 09-03-2017 NA29_RS19285 5806a53f02f64357aac0b63833913ab5 290 Gene3D G3DSA:3.40.190.10 181 247 1.6E-4 T 09-03-2017 NA29_RS19285 5806a53f02f64357aac0b63833913ab5 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.5E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19285 5806a53f02f64357aac0b63833913ab5 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.5E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19285 5806a53f02f64357aac0b63833913ab5 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.5E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19285 5806a53f02f64357aac0b63833913ab5 290 Gene3D G3DSA:3.40.190.10 92 180 1.3E-6 T 09-03-2017 NA29_RS19285 5806a53f02f64357aac0b63833913ab5 290 Pfam PF03466 LysR substrate binding domain 91 276 5.1E-14 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS19285 5806a53f02f64357aac0b63833913ab5 290 Gene3D G3DSA:1.10.10.10 2 81 3.8E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19285 5806a53f02f64357aac0b63833913ab5 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.9E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19285 5806a53f02f64357aac0b63833913ab5 290 SUPERFAMILY SSF46785 4 85 9.59E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS25090 84dbb4003f4e5832a0775b70756c25a1 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.313 T 09-03-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 NA29_RS25090 84dbb4003f4e5832a0775b70756c25a1 156 Gene3D G3DSA:1.20.5.620 63 122 1.6E-11 T 09-03-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain NA29_RS25090 84dbb4003f4e5832a0775b70756c25a1 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 2.0E-30 T 09-03-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 NA29_RS25090 84dbb4003f4e5832a0775b70756c25a1 156 SUPERFAMILY SSF81573 63 121 2.09E-10 T 09-03-2017 IPR028987 F-type ATP synthase subunit B-like, membrane domain NA29_RS25090 84dbb4003f4e5832a0775b70756c25a1 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 5.0E-43 T 09-03-2017 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 NA29_RS24710 20cfbf9cd178850f49d515f42a7a6cde 346 Gene3D G3DSA:3.30.565.10 182 340 2.4E-39 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS24710 20cfbf9cd178850f49d515f42a7a6cde 346 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 226 336 3.3E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS24710 20cfbf9cd178850f49d515f42a7a6cde 346 SUPERFAMILY SSF55874 169 336 5.37E-40 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS24710 20cfbf9cd178850f49d515f42a7a6cde 346 Pfam PF00512 His Kinase A (phospho-acceptor) domain 117 178 8.7E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS24710 20cfbf9cd178850f49d515f42a7a6cde 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 335 5.6E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS24710 20cfbf9cd178850f49d515f42a7a6cde 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 263 277 5.6E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS24710 20cfbf9cd178850f49d515f42a7a6cde 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 291 5.6E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS24710 20cfbf9cd178850f49d515f42a7a6cde 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 316 5.6E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS24710 20cfbf9cd178850f49d515f42a7a6cde 346 Gene3D G3DSA:1.10.287.130 108 175 4.0E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS24710 20cfbf9cd178850f49d515f42a7a6cde 346 SMART SM00388 116 180 9.3E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS24710 20cfbf9cd178850f49d515f42a7a6cde 346 SUPERFAMILY SSF47384 99 178 7.06E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS24710 20cfbf9cd178850f49d515f42a7a6cde 346 SMART SM00387 226 338 4.5E-31 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS24710 20cfbf9cd178850f49d515f42a7a6cde 346 Pfam PF00672 HAMP domain 45 111 1.4E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS24710 20cfbf9cd178850f49d515f42a7a6cde 346 SUPERFAMILY SSF158472 65 111 6.15E-7 T 09-03-2017 NA29_RS24710 20cfbf9cd178850f49d515f42a7a6cde 346 SMART SM00304 63 115 6.8E-8 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS11805 16f4fe1164b73c5fc1e41146b346b0aa 379 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 NA29_RS11805 16f4fe1164b73c5fc1e41146b346b0aa 379 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 370 4.5E-104 T 09-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 NA29_RS11805 16f4fe1164b73c5fc1e41146b346b0aa 379 Gene3D G3DSA:3.40.50.1970 6 184 8.6E-51 T 09-03-2017 NA29_RS11805 16f4fe1164b73c5fc1e41146b346b0aa 379 SUPERFAMILY SSF56796 4 377 3.93E-109 T 09-03-2017 NA29_RS11805 16f4fe1164b73c5fc1e41146b346b0aa 379 Gene3D G3DSA:1.20.1090.10 185 379 7.9E-54 T 09-03-2017 NA29_RS00215 fe489c482f72a0fcaaf130ae05cba5a5 533 Pfam PF00581 Rhodanese-like domain 133 227 6.3E-9 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS00215 fe489c482f72a0fcaaf130ae05cba5a5 533 Pfam PF00581 Rhodanese-like domain 10 104 1.1E-7 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS00215 fe489c482f72a0fcaaf130ae05cba5a5 533 Pfam PF00581 Rhodanese-like domain 279 358 6.3E-8 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS00215 fe489c482f72a0fcaaf130ae05cba5a5 533 SMART SM00450 270 366 1.1E-6 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS00215 fe489c482f72a0fcaaf130ae05cba5a5 533 SMART SM00450 10 107 8.2E-11 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS00215 fe489c482f72a0fcaaf130ae05cba5a5 533 SMART SM00450 133 231 2.2E-7 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS00215 fe489c482f72a0fcaaf130ae05cba5a5 533 SMART SM00450 377 471 0.085 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS00215 fe489c482f72a0fcaaf130ae05cba5a5 533 SUPERFAMILY SSF52821 5 125 4.45E-27 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS00215 fe489c482f72a0fcaaf130ae05cba5a5 533 Gene3D G3DSA:3.40.250.10 368 479 3.1E-11 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS00215 fe489c482f72a0fcaaf130ae05cba5a5 533 Gene3D G3DSA:3.40.250.10 260 358 4.2E-18 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS00215 fe489c482f72a0fcaaf130ae05cba5a5 533 Gene3D G3DSA:3.40.250.10 127 237 5.3E-19 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS00215 fe489c482f72a0fcaaf130ae05cba5a5 533 Gene3D G3DSA:3.40.250.10 6 113 8.4E-21 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS00215 fe489c482f72a0fcaaf130ae05cba5a5 533 SUPERFAMILY SSF52821 373 521 2.36E-20 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS00215 fe489c482f72a0fcaaf130ae05cba5a5 533 SUPERFAMILY SSF52821 108 237 1.02E-30 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS00215 fe489c482f72a0fcaaf130ae05cba5a5 533 SUPERFAMILY SSF52821 259 358 1.83E-23 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS07365 acaf074161d64c3248df107c61a2f943 246 Pfam PF13276 HTH-like domain 14 70 2.3E-13 T 09-03-2017 IPR025948 HTH-like domain NA29_RS07365 acaf074161d64c3248df107c61a2f943 246 SUPERFAMILY SSF53098 79 239 8.98E-35 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS07365 acaf074161d64c3248df107c61a2f943 246 Pfam PF13683 Integrase core domain 170 235 6.5E-30 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 NA29_RS07365 acaf074161d64c3248df107c61a2f943 246 Gene3D G3DSA:3.30.420.10 82 236 3.5E-36 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS10335 33c99bfcd88a779b71c76f09852b005b 446 Hamap MF_00303 Trigger factor [tig]. 1 431 20.62 T 09-03-2017 IPR005215 Trigger factor GO:0015031 NA29_RS10335 33c99bfcd88a779b71c76f09852b005b 446 Gene3D G3DSA:3.30.70.1050 1 118 9.1E-34 T 09-03-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 NA29_RS10335 33c99bfcd88a779b71c76f09852b005b 446 TIGRFAM TIGR00115 tig: trigger factor 11 425 9.0E-125 T 09-03-2017 IPR005215 Trigger factor GO:0015031 NA29_RS10335 33c99bfcd88a779b71c76f09852b005b 446 SUPERFAMILY SSF109998 258 441 6.97E-49 T 09-03-2017 IPR027304 Trigger factor/SurA domain NA29_RS10335 33c99bfcd88a779b71c76f09852b005b 446 PIRSF PIRSF003095 1 446 1.1E-121 T 09-03-2017 IPR005215 Trigger factor GO:0015031 NA29_RS10335 33c99bfcd88a779b71c76f09852b005b 446 SUPERFAMILY SSF54534 89 251 4.52E-31 T 09-03-2017 NA29_RS10335 33c99bfcd88a779b71c76f09852b005b 446 Gene3D G3DSA:1.10.3120.10 214 402 1.6E-59 T 09-03-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 NA29_RS10335 33c99bfcd88a779b71c76f09852b005b 446 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 165 247 1.6E-15 T 09-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 NA29_RS10335 33c99bfcd88a779b71c76f09852b005b 446 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 272 425 6.0E-36 T 09-03-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 NA29_RS10335 33c99bfcd88a779b71c76f09852b005b 446 Pfam PF05697 Bacterial trigger factor protein (TF) 1 142 1.7E-35 T 09-03-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 NA29_RS10335 33c99bfcd88a779b71c76f09852b005b 446 SUPERFAMILY SSF102735 1 129 3.4E-32 T 09-03-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 NA29_RS12575 da18e7ab26b06e4297e1e40e39a63cd2 450 Pfam PF06441 Epoxide hydrolase N terminus 52 156 3.3E-35 T 09-03-2017 IPR010497 Epoxide hydrolase, N-terminal KEGG: 00980+3.3.2.9|Reactome: R-HSA-211945 NA29_RS12575 da18e7ab26b06e4297e1e40e39a63cd2 450 PIRSF PIRSF001112 3 450 1.4E-140 T 09-03-2017 IPR016292 Epoxide hydrolase GO:0033961 KEGG: 00980+3.3.2.9|Reactome: R-HSA-211945 NA29_RS12575 da18e7ab26b06e4297e1e40e39a63cd2 450 Gene3D G3DSA:3.40.50.1820 44 448 1.2E-129 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS12575 da18e7ab26b06e4297e1e40e39a63cd2 450 PRINTS PR00412 Epoxide hydrolase signature 148 166 2.2E-8 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS12575 da18e7ab26b06e4297e1e40e39a63cd2 450 PRINTS PR00412 Epoxide hydrolase signature 177 192 2.2E-8 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS12575 da18e7ab26b06e4297e1e40e39a63cd2 450 PRINTS PR00412 Epoxide hydrolase signature 390 406 2.2E-8 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS12575 da18e7ab26b06e4297e1e40e39a63cd2 450 PRINTS PR00412 Epoxide hydrolase signature 422 444 2.2E-8 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS12575 da18e7ab26b06e4297e1e40e39a63cd2 450 SUPERFAMILY SSF53474 47 446 1.21E-86 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS07525 c7a030546f09b172e14c86fa41b0b757 240 SUPERFAMILY SSF52540 4 236 1.7E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07525 c7a030546f09b172e14c86fa41b0b757 240 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS07525 c7a030546f09b172e14c86fa41b0b757 240 Gene3D G3DSA:3.40.50.300 2 235 1.5E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07525 c7a030546f09b172e14c86fa41b0b757 240 PIRSF PIRSF039137 1 238 4.4E-107 T 09-03-2017 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 NA29_RS07525 c7a030546f09b172e14c86fa41b0b757 240 SMART SM00382 29 216 1.3E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS07525 c7a030546f09b172e14c86fa41b0b757 240 Pfam PF00005 ABC transporter 21 165 1.3E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS21260 16a1cc1627c38bead7cf0ec66f1bf3b8 350 Pfam PF03601 Conserved hypothetical protein 698 29 329 3.0E-81 T 09-03-2017 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 NA29_RS22885 2590fdea600122b69eaf7ff9cb3b1bef 370 Pfam PF00149 Calcineurin-like phosphoesterase 143 310 3.0E-11 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NA29_RS22885 2590fdea600122b69eaf7ff9cb3b1bef 370 Gene3D G3DSA:3.60.21.10 143 316 2.4E-26 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS22885 2590fdea600122b69eaf7ff9cb3b1bef 370 SUPERFAMILY SSF56300 143 368 1.01E-38 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS13615 bf520327030946d1b52676b458480d8a 358 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS13615 bf520327030946d1b52676b458480d8a 358 SUPERFAMILY SSF52540 3 244 1.73E-86 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13615 bf520327030946d1b52676b458480d8a 358 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 1.3E-118 T 09-03-2017 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 NA29_RS13615 bf520327030946d1b52676b458480d8a 358 Gene3D G3DSA:3.40.50.300 3 245 1.5E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13615 bf520327030946d1b52676b458480d8a 358 SMART SM00382 27 214 7.4E-21 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS13615 bf520327030946d1b52676b458480d8a 358 Pfam PF12857 TOBE-like domain 294 349 2.6E-11 T 09-03-2017 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 NA29_RS13615 bf520327030946d1b52676b458480d8a 358 Pfam PF00005 ABC transporter 18 164 4.7E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS13615 bf520327030946d1b52676b458480d8a 358 SUPERFAMILY SSF50331 240 351 3.57E-8 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS16375 a69d3c4972da31d4f90801927c2f86a1 625 Pfam PF00723 Glycosyl hydrolases family 15 228 532 1.5E-61 T 09-03-2017 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: R-HSA-70221 NA29_RS16375 a69d3c4972da31d4f90801927c2f86a1 625 SUPERFAMILY SSF48208 197 591 5.1E-111 T 09-03-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 NA29_RS16375 a69d3c4972da31d4f90801927c2f86a1 625 Gene3D G3DSA:1.50.10.10 216 601 2.9E-88 T 09-03-2017 IPR012341 Six-hairpin glycosidase GO:0003824 NA29_RS10885 9b88fc596d7fc873b1b8439dfe91beca 271 Gene3D G3DSA:1.10.150.290 196 252 5.4E-30 T 09-03-2017 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 NA29_RS10885 9b88fc596d7fc873b1b8439dfe91beca 271 Gene3D G3DSA:3.40.50.150 18 175 3.1E-37 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS10885 9b88fc596d7fc873b1b8439dfe91beca 271 Pfam PF13489 Methyltransferase domain 29 181 1.9E-18 T 09-03-2017 NA29_RS10885 9b88fc596d7fc873b1b8439dfe91beca 271 SUPERFAMILY SSF53335 20 271 1.28E-33 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS00440 d533a364289db6c401b66f8e6730cccd 528 Pfam PF12792 CSS motif domain associated with EAL 35 218 4.8E-30 T 09-03-2017 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain NA29_RS00440 d533a364289db6c401b66f8e6730cccd 528 SMART SM00052 252 495 9.5E-78 T 09-03-2017 IPR001633 EAL domain NA29_RS00440 d533a364289db6c401b66f8e6730cccd 528 SUPERFAMILY SSF141868 259 502 6.93E-68 T 09-03-2017 IPR001633 EAL domain NA29_RS00440 d533a364289db6c401b66f8e6730cccd 528 Gene3D G3DSA:3.20.20.450 257 500 1.2E-71 T 09-03-2017 IPR001633 EAL domain NA29_RS00440 d533a364289db6c401b66f8e6730cccd 528 Pfam PF00563 EAL domain 258 490 1.6E-61 T 09-03-2017 IPR001633 EAL domain NA29_RS05145 8a51a3e7ea2c1ce8d36ecd3fd1b58bc3 246 Gene3D G3DSA:3.30.1150.10 141 235 3.2E-9 T 09-03-2017 NA29_RS05145 8a51a3e7ea2c1ce8d36ecd3fd1b58bc3 246 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 186 232 2.6E-7 T 09-03-2017 IPR006260 TonB, C-terminal GO:0006810 NA29_RS05145 8a51a3e7ea2c1ce8d36ecd3fd1b58bc3 246 SUPERFAMILY SSF74653 147 233 1.11E-8 T 09-03-2017 NA29_RS05145 8a51a3e7ea2c1ce8d36ecd3fd1b58bc3 246 SUPERFAMILY SSF74653 73 86 1.11E-8 T 09-03-2017 NA29_RS21770 3122ae8004920739c64fc3679703ded0 523 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 425 483 2.8E-7 T 09-03-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 NA29_RS21770 3122ae8004920739c64fc3679703ded0 523 SUPERFAMILY SSF48452 6 107 8.95E-12 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS21770 3122ae8004920739c64fc3679703ded0 523 Pfam PF13432 Tetratricopeptide repeat 120 176 1.0E-6 T 09-03-2017 NA29_RS21770 3122ae8004920739c64fc3679703ded0 523 Pfam PF13432 Tetratricopeptide repeat 181 227 0.0017 T 09-03-2017 NA29_RS21770 3122ae8004920739c64fc3679703ded0 523 Pfam PF13432 Tetratricopeptide repeat 11 70 7.6E-6 T 09-03-2017 NA29_RS21770 3122ae8004920739c64fc3679703ded0 523 Gene3D G3DSA:1.25.40.10 6 234 5.1E-42 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS21770 3122ae8004920739c64fc3679703ded0 523 SMART SM00028 176 209 0.017 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS21770 3122ae8004920739c64fc3679703ded0 523 SMART SM00028 5 38 1.5 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS21770 3122ae8004920739c64fc3679703ded0 523 SMART SM00028 142 175 0.097 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS21770 3122ae8004920739c64fc3679703ded0 523 SMART SM00028 39 72 110.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS21770 3122ae8004920739c64fc3679703ded0 523 SMART SM00028 74 107 260.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS21770 3122ae8004920739c64fc3679703ded0 523 Gene3D G3DSA:3.40.50.2000 374 486 3.7E-16 T 09-03-2017 NA29_RS21770 3122ae8004920739c64fc3679703ded0 523 SUPERFAMILY SSF48452 74 236 7.59E-26 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS21770 3122ae8004920739c64fc3679703ded0 523 SUPERFAMILY SSF53756 260 485 6.28E-21 T 09-03-2017 NA29_RS15715 eca4239a3318903dd1a1ca4e65201e49 256 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 226 1.1E-54 T 09-03-2017 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 NA29_RS15715 eca4239a3318903dd1a1ca4e65201e49 256 SUPERFAMILY SSF75217 1 236 1.64E-92 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases NA29_RS15715 eca4239a3318903dd1a1ca4e65201e49 256 PIRSF PIRSF000386 1 253 2.0E-89 T 09-03-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 NA29_RS15715 eca4239a3318903dd1a1ca4e65201e49 256 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 233 1.5E-88 T 09-03-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 NA29_RS15715 eca4239a3318903dd1a1ca4e65201e49 256 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 256 107.08 T 09-03-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 NA29_RS15715 eca4239a3318903dd1a1ca4e65201e49 256 Gene3D G3DSA:1.10.1270.20 167 252 3.5E-33 T 09-03-2017 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 NA29_RS15715 eca4239a3318903dd1a1ca4e65201e49 256 Gene3D G3DSA:3.40.1280.10 1 165 4.5E-59 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NA29_RS17395 4c4a33efc334976e6866142ea00bda64 263 SUPERFAMILY SSF51735 6 247 9.4E-64 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17395 4c4a33efc334976e6866142ea00bda64 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 7.9E-5 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17395 4c4a33efc334976e6866142ea00bda64 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 7.9E-5 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17395 4c4a33efc334976e6866142ea00bda64 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 7.9E-5 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17395 4c4a33efc334976e6866142ea00bda64 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 1.3E-49 T 09-03-2017 NA29_RS17395 4c4a33efc334976e6866142ea00bda64 263 Gene3D G3DSA:3.40.50.720 3 247 1.0E-64 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17395 4c4a33efc334976e6866142ea00bda64 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.6E-29 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17395 4c4a33efc334976e6866142ea00bda64 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.6E-29 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17395 4c4a33efc334976e6866142ea00bda64 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.6E-29 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17395 4c4a33efc334976e6866142ea00bda64 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.6E-29 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17395 4c4a33efc334976e6866142ea00bda64 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.6E-29 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS17395 4c4a33efc334976e6866142ea00bda64 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.6E-29 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS00850 a01404cacff726d1d3ebd21721810a57 323 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 236 304 8.0E-16 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) NA29_RS00850 a01404cacff726d1d3ebd21721810a57 323 Gene3D G3DSA:2.30.330.10 235 305 7.8E-19 T 09-03-2017 NA29_RS00850 a01404cacff726d1d3ebd21721810a57 323 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 238 250 3.1E-11 T 09-03-2017 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 NA29_RS00850 a01404cacff726d1d3ebd21721810a57 323 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 282 299 3.1E-11 T 09-03-2017 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 NA29_RS00850 a01404cacff726d1d3ebd21721810a57 323 PRINTS PR01339 Type III secretion system outer membrane O protein family signature 165 175 3.1E-11 T 09-03-2017 IPR003283 Type III secretion system outer membrane, SpaO GO:0009306 NA29_RS00850 a01404cacff726d1d3ebd21721810a57 323 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 30 305 2.1E-37 T 09-03-2017 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 NA29_RS00850 a01404cacff726d1d3ebd21721810a57 323 SUPERFAMILY SSF101801 236 306 7.85E-16 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) NA29_RS24445 97ce7ec0218e4b5b46dde0d88a9f3228 399 Pfam PF04932 O-Antigen ligase 160 316 1.8E-20 T 09-03-2017 IPR007016 O-antigen ligase-related NA29_RS01395 b2d2a1a16ddc2c3923283046f5171dee 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 8.0E-35 T 09-03-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01395 b2d2a1a16ddc2c3923283046f5171dee 100 Gene3D G3DSA:3.30.280.10 1 99 2.2E-50 T 09-03-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01395 b2d2a1a16ddc2c3923283046f5171dee 100 PIRSF PIRSF001223 1 100 8.5E-52 T 09-03-2017 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01395 b2d2a1a16ddc2c3923283046f5171dee 100 Pfam PF00547 Urease, gamma subunit 1 99 7.9E-48 T 09-03-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01395 b2d2a1a16ddc2c3923283046f5171dee 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 35.594 T 09-03-2017 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01395 b2d2a1a16ddc2c3923283046f5171dee 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 8.9E-54 T 09-03-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01395 b2d2a1a16ddc2c3923283046f5171dee 100 SUPERFAMILY SSF54111 1 99 1.05E-47 T 09-03-2017 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01515 628ee8543b784e89b060a758bd08878c 416 SUPERFAMILY SSF81301 1 125 4.03E-29 T 09-03-2017 NA29_RS01515 628ee8543b784e89b060a758bd08878c 416 Gene3D G3DSA:1.10.3090.10 128 359 1.7E-49 T 09-03-2017 NA29_RS01515 628ee8543b784e89b060a758bd08878c 416 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 413 49.88 T 09-03-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 NA29_RS01515 628ee8543b784e89b060a758bd08878c 416 Gene3D G3DSA:3.30.460.10 1 127 7.7E-29 T 09-03-2017 NA29_RS01515 628ee8543b784e89b060a758bd08878c 416 SUPERFAMILY SSF81891 127 358 1.83E-48 T 09-03-2017 NA29_RS01515 628ee8543b784e89b060a758bd08878c 416 Pfam PF01966 HD domain 235 349 1.3E-6 T 09-03-2017 IPR006674 HD domain NA29_RS01515 628ee8543b784e89b060a758bd08878c 416 Pfam PF01743 Poly A polymerase head domain 3 127 4.3E-16 T 09-03-2017 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 NA29_RS01515 628ee8543b784e89b060a758bd08878c 416 PIRSF PIRSF000813 1 412 5.9E-184 T 09-03-2017 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 NA29_RS01515 628ee8543b784e89b060a758bd08878c 416 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 153 215 2.6E-10 T 09-03-2017 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 NA29_RS03125 9fc7f5e7c163571e6af2e689460c6272 274 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 65 258 4.0E-39 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS03125 9fc7f5e7c163571e6af2e689460c6272 274 Gene3D G3DSA:3.40.190.10 154 215 2.3E-9 T 09-03-2017 NA29_RS03125 9fc7f5e7c163571e6af2e689460c6272 274 Gene3D G3DSA:3.40.190.10 217 258 4.0E-15 T 09-03-2017 NA29_RS03125 9fc7f5e7c163571e6af2e689460c6272 274 Gene3D G3DSA:3.40.190.10 65 112 4.0E-15 T 09-03-2017 NA29_RS03125 9fc7f5e7c163571e6af2e689460c6272 274 SUPERFAMILY SSF53850 54 259 1.09E-38 T 09-03-2017 NA29_RS03125 9fc7f5e7c163571e6af2e689460c6272 274 SMART SM00062 62 261 5.2E-20 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS03125 9fc7f5e7c163571e6af2e689460c6272 274 Gene3D G3DSA:3.40.190.10 113 153 1.7E-12 T 09-03-2017 NA29_RS21065 a53b8ed30af4ca523d365597c8d9da08 107 Gene3D G3DSA:3.30.70.20 4 102 1.0E-22 T 09-03-2017 NA29_RS21065 a53b8ed30af4ca523d365597c8d9da08 107 Pfam PF00037 4Fe-4S binding domain 34 56 1.8E-7 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NA29_RS21065 a53b8ed30af4ca523d365597c8d9da08 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS21065 a53b8ed30af4ca523d365597c8d9da08 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 1.3E-19 T 09-03-2017 IPR022569 Ferredoxin, C-terminal NA29_RS21065 a53b8ed30af4ca523d365597c8d9da08 107 SUPERFAMILY SSF54862 3 100 6.65E-25 T 09-03-2017 NA29_RS21065 a53b8ed30af4ca523d365597c8d9da08 107 Pfam PF12800 4Fe-4S binding domain 7 23 0.25 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NA29_RS21065 a53b8ed30af4ca523d365597c8d9da08 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.3E-14 T 09-03-2017 IPR000813 7Fe ferredoxin GO:0009055 NA29_RS21065 a53b8ed30af4ca523d365597c8d9da08 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.3E-14 T 09-03-2017 IPR000813 7Fe ferredoxin GO:0009055 NA29_RS21065 a53b8ed30af4ca523d365597c8d9da08 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.3E-14 T 09-03-2017 IPR000813 7Fe ferredoxin GO:0009055 NA29_RS15040 22b018500e2e2f35c554cc7236aa95ef 354 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 20 349 25.18 T 09-03-2017 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15040 22b018500e2e2f35c554cc7236aa95ef 354 Pfam PF00146 NADH dehydrogenase 27 342 2.1E-128 T 09-03-2017 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15040 22b018500e2e2f35c554cc7236aa95ef 354 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 232 245 - T 09-03-2017 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS01680 502aa8cf994cbeb0925d58f73dd51567 444 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 09-03-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 NA29_RS01680 502aa8cf994cbeb0925d58f73dd51567 444 Gene3D G3DSA:3.40.50.620 4 174 4.1E-43 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS01680 502aa8cf994cbeb0925d58f73dd51567 444 SUPERFAMILY SSF69864 190 442 1.44E-80 T 09-03-2017 NA29_RS01680 502aa8cf994cbeb0925d58f73dd51567 444 Pfam PF00764 Arginosuccinate synthase 16 406 8.5E-58 T 09-03-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 NA29_RS01680 502aa8cf994cbeb0925d58f73dd51567 444 Gene3D G3DSA:1.10.287.400 377 440 1.1E-32 T 09-03-2017 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 NA29_RS01680 502aa8cf994cbeb0925d58f73dd51567 444 Gene3D G3DSA:3.90.1260.10 175 373 2.3E-65 T 09-03-2017 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 NA29_RS01680 502aa8cf994cbeb0925d58f73dd51567 444 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 444 71.037 T 09-03-2017 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 NA29_RS01680 502aa8cf994cbeb0925d58f73dd51567 444 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 09-03-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 NA29_RS01680 502aa8cf994cbeb0925d58f73dd51567 444 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 7.4E-157 T 09-03-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 NA29_RS01680 502aa8cf994cbeb0925d58f73dd51567 444 SUPERFAMILY SSF52402 3 187 6.41E-34 T 09-03-2017 NA29_RS16110 7afcf56cc595dde3f96c506b1f289c8f 472 Gene3D G3DSA:1.20.1250.20 281 460 2.8E-20 T 09-03-2017 NA29_RS16110 7afcf56cc595dde3f96c506b1f289c8f 472 Pfam PF07690 Major Facilitator Superfamily 39 428 2.1E-52 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS16110 7afcf56cc595dde3f96c506b1f289c8f 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 129 149 1.4E-5 T 09-03-2017 NA29_RS16110 7afcf56cc595dde3f96c506b1f289c8f 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 159 183 1.4E-5 T 09-03-2017 NA29_RS16110 7afcf56cc595dde3f96c506b1f289c8f 472 PRINTS PR01036 Tetracycline resistance protein TetB signature 419 438 1.4E-5 T 09-03-2017 NA29_RS16110 7afcf56cc595dde3f96c506b1f289c8f 472 Gene3D G3DSA:1.20.1250.20 37 218 6.0E-25 T 09-03-2017 NA29_RS16110 7afcf56cc595dde3f96c506b1f289c8f 472 SUPERFAMILY SSF103473 24 218 6.41E-67 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS16110 7afcf56cc595dde3f96c506b1f289c8f 472 SUPERFAMILY SSF103473 267 462 6.41E-67 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS02025 cc5e81c851bede209a27bf0d97ce9aa7 135 SUPERFAMILY SSF54427 34 133 1.24E-32 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS02025 cc5e81c851bede209a27bf0d97ce9aa7 135 Gene3D G3DSA:3.10.450.50 15 133 3.3E-39 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS00360 96cea1a8078ec63c157471ae4c06409a 374 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 68 78 - T 09-03-2017 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 NA29_RS00360 96cea1a8078ec63c157471ae4c06409a 374 Gene3D G3DSA:3.90.245.10 62 372 1.4E-97 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain NA29_RS00360 96cea1a8078ec63c157471ae4c06409a 374 SUPERFAMILY SSF53590 63 372 1.57E-93 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain NA29_RS00360 96cea1a8078ec63c157471ae4c06409a 374 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 64 363 5.4E-66 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain NA29_RS06805 e1bf5c00a410f0acfe953cfe2d87b34b 458 Pfam PF01425 Amidase 29 443 1.0E-89 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS06805 e1bf5c00a410f0acfe953cfe2d87b34b 458 SUPERFAMILY SSF75304 11 455 4.84E-118 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS06805 e1bf5c00a410f0acfe953cfe2d87b34b 458 ProSitePatterns PS00571 Amidases signature. 160 191 - T 09-03-2017 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 NA29_RS06805 e1bf5c00a410f0acfe953cfe2d87b34b 458 Gene3D G3DSA:3.90.1300.10 11 455 2.8E-123 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS24315 270df102bea36681ae153986e52b7e03 169 SUPERFAMILY SSF48452 31 146 4.81E-12 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS24315 270df102bea36681ae153986e52b7e03 169 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 28 51 6.6E-5 T 09-03-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 NA29_RS24315 270df102bea36681ae153986e52b7e03 169 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 53 72 6.6E-5 T 09-03-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 NA29_RS24315 270df102bea36681ae153986e52b7e03 169 PRINTS PR01595 Gram-negative bacterial type III secretion SycD chaperone signature 77 99 6.6E-5 T 09-03-2017 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD GO:0006950 NA29_RS24315 270df102bea36681ae153986e52b7e03 169 Gene3D G3DSA:1.25.40.10 35 145 8.7E-11 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS24315 270df102bea36681ae153986e52b7e03 169 PIRSF PIRSF003165 5 166 7.8E-38 T 09-03-2017 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup NA29_RS10975 f3e3fbe71e7de69bb3f3218ae913b2e4 154 Gene3D G3DSA:3.10.450.50 34 140 1.1E-13 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS10975 f3e3fbe71e7de69bb3f3218ae913b2e4 154 SUPERFAMILY SSF54427 34 144 7.9E-26 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS10975 f3e3fbe71e7de69bb3f3218ae913b2e4 154 Pfam PF12680 SnoaL-like domain 39 136 9.4E-16 T 09-03-2017 IPR009959 Polyketide cyclase SnoaL-like domain NA29_RS24900 68004fefde3638baa9860d4a5132bf1b 260 SUPERFAMILY SSF117143 94 222 3.66E-36 T 09-03-2017 NA29_RS24900 68004fefde3638baa9860d4a5132bf1b 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 2.0E-118 T 09-03-2017 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 NA29_RS24900 68004fefde3638baa9860d4a5132bf1b 260 Pfam PF00460 Flagella basal body rod protein 5 35 3.0E-12 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 NA29_RS24900 68004fefde3638baa9860d4a5132bf1b 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 2.8E-25 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NA29_RS24900 68004fefde3638baa9860d4a5132bf1b 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 09-03-2017 IPR019776 Flagellar basal body rod protein, conserved site NA29_RS24900 68004fefde3638baa9860d4a5132bf1b 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 4.2E-30 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G NA29_RS24900 68004fefde3638baa9860d4a5132bf1b 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 3.1E-50 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G NA29_RS23520 546a7395984663ecfa3cf9e44bb077de 308 Pfam PF00005 ABC transporter 19 161 2.8E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS23520 546a7395984663ecfa3cf9e44bb077de 308 SMART SM00382 28 209 5.0E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS23520 546a7395984663ecfa3cf9e44bb077de 308 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS23520 546a7395984663ecfa3cf9e44bb077de 308 SUPERFAMILY SSF52540 3 227 1.33E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23520 546a7395984663ecfa3cf9e44bb077de 308 Gene3D G3DSA:3.40.50.300 3 226 2.2E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02675 3c3c8d1020581c2ae69e1f6e19bf2dea 198 SUPERFAMILY SSF53178 1 193 7.59E-68 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NA29_RS02675 3c3c8d1020581c2ae69e1f6e19bf2dea 198 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 193 2.7E-62 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NA29_RS02675 3c3c8d1020581c2ae69e1f6e19bf2dea 198 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 109 119 - T 09-03-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 NA29_RS02675 3c3c8d1020581c2ae69e1f6e19bf2dea 198 Pfam PF01195 Peptidyl-tRNA hydrolase 4 191 1.7E-58 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NA29_RS02675 3c3c8d1020581c2ae69e1f6e19bf2dea 198 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 186 35.856 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NA29_RS02675 3c3c8d1020581c2ae69e1f6e19bf2dea 198 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 09-03-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 NA29_RS02675 3c3c8d1020581c2ae69e1f6e19bf2dea 198 Gene3D G3DSA:3.40.50.1470 1 194 6.1E-73 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 NA29_RS19850 6c3e144eeefa11268b3e8bf7fbdfbe33 257 SUPERFAMILY SSF52540 5 253 4.0E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19850 6c3e144eeefa11268b3e8bf7fbdfbe33 257 Pfam PF00005 ABC transporter 22 182 4.9E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS19850 6c3e144eeefa11268b3e8bf7fbdfbe33 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 253 1.5E-11 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS19850 6c3e144eeefa11268b3e8bf7fbdfbe33 257 SMART SM00382 31 230 3.9E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS19850 6c3e144eeefa11268b3e8bf7fbdfbe33 257 Gene3D G3DSA:3.40.50.300 3 251 3.1E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07520 6c3e144eeefa11268b3e8bf7fbdfbe33 257 SUPERFAMILY SSF52540 5 253 4.0E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07520 6c3e144eeefa11268b3e8bf7fbdfbe33 257 Pfam PF00005 ABC transporter 22 182 4.9E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS07520 6c3e144eeefa11268b3e8bf7fbdfbe33 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 253 1.5E-11 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS07520 6c3e144eeefa11268b3e8bf7fbdfbe33 257 SMART SM00382 31 230 3.9E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS07520 6c3e144eeefa11268b3e8bf7fbdfbe33 257 Gene3D G3DSA:3.40.50.300 3 251 3.1E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20695 9dfaa2f4f3225ba90c6519bc3dc1eb07 303 Gene3D G3DSA:3.20.20.70 13 301 2.2E-74 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS20695 9dfaa2f4f3225ba90c6519bc3dc1eb07 303 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 5 303 50.044 T 09-03-2017 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 NA29_RS20695 9dfaa2f4f3225ba90c6519bc3dc1eb07 303 SUPERFAMILY SSF51569 13 300 8.58E-67 T 09-03-2017 NA29_RS20695 9dfaa2f4f3225ba90c6519bc3dc1eb07 303 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 4 301 1.1E-132 T 09-03-2017 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 NA29_RS20695 9dfaa2f4f3225ba90c6519bc3dc1eb07 303 SMART SM01130 11 302 1.1E-74 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS20695 9dfaa2f4f3225ba90c6519bc3dc1eb07 303 Pfam PF00701 Dihydrodipicolinate synthetase family 13 300 2.5E-50 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS20695 9dfaa2f4f3225ba90c6519bc3dc1eb07 303 PIRSF PIRSF001365 7 302 7.9E-56 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS13010 2cf55ed9db65ede658f6b5c028561347 239 Pfam PF00005 ABC transporter 18 164 2.9E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS13010 2cf55ed9db65ede658f6b5c028561347 239 SMART SM00382 27 212 2.9E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS13010 2cf55ed9db65ede658f6b5c028561347 239 Gene3D G3DSA:3.40.50.300 1 232 2.4E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13010 2cf55ed9db65ede658f6b5c028561347 239 SUPERFAMILY SSF52540 2 234 1.93E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14645 9d2d6658e8ae5a247573367b6e441cfa 467 Pfam PF09190 DALR domain 347 402 3.4E-16 T 09-03-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 NA29_RS14645 9d2d6658e8ae5a247573367b6e441cfa 467 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 466 2.2E-171 T 09-03-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 NA29_RS14645 9d2d6658e8ae5a247573367b6e441cfa 467 SMART SM00840 347 402 9.7E-23 T 09-03-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 NA29_RS14645 9d2d6658e8ae5a247573367b6e441cfa 467 SUPERFAMILY SSF52374 4 318 1.21E-96 T 09-03-2017 NA29_RS14645 9d2d6658e8ae5a247573367b6e441cfa 467 Gene3D G3DSA:3.40.50.620 22 310 1.9E-110 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS14645 9d2d6658e8ae5a247573367b6e441cfa 467 SUPERFAMILY SSF47323 321 465 2.22E-33 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS14645 9d2d6658e8ae5a247573367b6e441cfa 467 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 317 4.5E-132 T 09-03-2017 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 NA29_RS14645 9d2d6658e8ae5a247573367b6e441cfa 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 196 214 7.6E-30 T 09-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 NA29_RS14645 9d2d6658e8ae5a247573367b6e441cfa 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 227 248 7.6E-30 T 09-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 NA29_RS14645 9d2d6658e8ae5a247573367b6e441cfa 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 7.6E-30 T 09-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 NA29_RS14645 9d2d6658e8ae5a247573367b6e441cfa 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 7.6E-30 T 09-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 NA29_RS14645 9d2d6658e8ae5a247573367b6e441cfa 467 Gene3D G3DSA:1.20.120.640 312 391 1.9E-21 T 09-03-2017 NA29_RS14645 9d2d6658e8ae5a247573367b6e441cfa 467 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 466 38.892 T 09-03-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 NA29_RS19400 00314d9554647e5bbc1e67e1be461048 137 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 9 128 31.224 T 09-03-2017 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 NA29_RS19400 00314d9554647e5bbc1e67e1be461048 137 PIRSF PIRSF006614 5 136 5.8E-52 T 09-03-2017 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 NA29_RS19400 00314d9554647e5bbc1e67e1be461048 137 Pfam PF02142 MGS-like domain 22 115 4.0E-16 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain NA29_RS19400 00314d9554647e5bbc1e67e1be461048 137 Gene3D G3DSA:3.40.50.1380 6 128 5.1E-55 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain NA29_RS19400 00314d9554647e5bbc1e67e1be461048 137 SMART SM00851 22 115 1.3E-25 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain NA29_RS19400 00314d9554647e5bbc1e67e1be461048 137 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 9 127 3.1E-47 T 09-03-2017 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 NA29_RS19400 00314d9554647e5bbc1e67e1be461048 137 SUPERFAMILY SSF52335 5 128 1.7E-48 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain NA29_RS10455 74f2bd0e8e31406bb21ee7e9d46ccdc2 238 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS10455 74f2bd0e8e31406bb21ee7e9d46ccdc2 238 SUPERFAMILY SSF52540 2 230 2.51E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10455 74f2bd0e8e31406bb21ee7e9d46ccdc2 238 Gene3D G3DSA:3.40.50.300 1 229 1.9E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10455 74f2bd0e8e31406bb21ee7e9d46ccdc2 238 SMART SM00382 26 215 9.9E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS10455 74f2bd0e8e31406bb21ee7e9d46ccdc2 238 Pfam PF00005 ABC transporter 17 166 2.4E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS12415 e02369ce13f614bf0970e4687e6bd246 415 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 100 315 4.4E-29 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NA29_RS12415 e02369ce13f614bf0970e4687e6bd246 415 SUPERFAMILY SSF111369 90 320 2.35E-36 T 09-03-2017 NA29_RS12415 e02369ce13f614bf0970e4687e6bd246 415 Gene3D G3DSA:2.40.50.100 205 234 1.7E-14 T 09-03-2017 NA29_RS12415 e02369ce13f614bf0970e4687e6bd246 415 Gene3D G3DSA:2.40.50.100 100 130 1.7E-14 T 09-03-2017 NA29_RS12415 e02369ce13f614bf0970e4687e6bd246 415 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 73 395 1.4E-67 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NA29_RS24535 3cce1413db6a561dc97702227f3675cb 294 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 18 216 8.8E-29 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 NA29_RS24535 3cce1413db6a561dc97702227f3675cb 294 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 96 107 - T 09-03-2017 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS24535 3cce1413db6a561dc97702227f3675cb 294 SUPERFAMILY SSF53790 17 237 1.57E-72 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 NA29_RS24535 3cce1413db6a561dc97702227f3675cb 294 Gene3D G3DSA:3.30.950.10 127 240 1.1E-33 T 09-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 NA29_RS24535 3cce1413db6a561dc97702227f3675cb 294 PIRSF PIRSF005917 7 294 4.9E-95 T 09-03-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS24535 3cce1413db6a561dc97702227f3675cb 294 Gene3D G3DSA:3.40.1010.10 17 126 1.6E-16 T 09-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 NA29_RS24535 3cce1413db6a561dc97702227f3675cb 294 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 18 239 34.157 T 09-03-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS24535 3cce1413db6a561dc97702227f3675cb 294 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 19 289 2.1E-72 T 09-03-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS01865 ff5d3dce482df8d6059ce9c9b07f9922 282 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 4.9E-35 T 09-03-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 NA29_RS01865 ff5d3dce482df8d6059ce9c9b07f9922 282 SUPERFAMILY SSF51735 1 185 7.02E-62 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS01865 ff5d3dce482df8d6059ce9c9b07f9922 282 SUPERFAMILY SSF48179 185 282 4.17E-32 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS01865 ff5d3dce482df8d6059ce9c9b07f9922 282 PIRSF PIRSF000105 1 282 2.1E-87 T 09-03-2017 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 NA29_RS01865 ff5d3dce482df8d6059ce9c9b07f9922 282 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 2.4E-66 T 09-03-2017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 NA29_RS01865 ff5d3dce482df8d6059ce9c9b07f9922 282 Gene3D G3DSA:3.40.50.720 1 187 3.8E-64 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS01865 ff5d3dce482df8d6059ce9c9b07f9922 282 Gene3D G3DSA:1.10.1040.10 188 282 2.4E-34 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS13535 25b86b54b83f824a9d71ef1fe4a55f48 581 Gene3D G3DSA:3.40.50.300 365 580 1.8E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13535 25b86b54b83f824a9d71ef1fe4a55f48 581 Pfam PF13638 PIN domain 121 267 4.3E-38 T 09-03-2017 IPR002716 PIN domain NA29_RS13535 25b86b54b83f824a9d71ef1fe4a55f48 581 SUPERFAMILY SSF88723 119 180 1.49E-11 T 09-03-2017 IPR029060 PIN domain-like NA29_RS13535 25b86b54b83f824a9d71ef1fe4a55f48 581 SUPERFAMILY SSF88723 218 272 1.49E-11 T 09-03-2017 IPR029060 PIN domain-like NA29_RS13535 25b86b54b83f824a9d71ef1fe4a55f48 581 SMART SM00670 119 255 4.5E-11 T 09-03-2017 IPR002716 PIN domain NA29_RS13535 25b86b54b83f824a9d71ef1fe4a55f48 581 Gene3D G3DSA:3.40.50.1010 120 179 1.1E-8 T 09-03-2017 IPR029060 PIN domain-like NA29_RS13535 25b86b54b83f824a9d71ef1fe4a55f48 581 Gene3D G3DSA:3.40.50.1010 218 274 1.1E-8 T 09-03-2017 IPR029060 PIN domain-like NA29_RS13535 25b86b54b83f824a9d71ef1fe4a55f48 581 Pfam PF02562 PhoH-like protein 368 573 2.0E-53 T 09-03-2017 IPR003714 PhoH-like protein GO:0005524 NA29_RS13535 25b86b54b83f824a9d71ef1fe4a55f48 581 SUPERFAMILY SSF52540 367 453 5.71E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13535 25b86b54b83f824a9d71ef1fe4a55f48 581 SUPERFAMILY SSF52540 486 559 5.71E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07000 7f95cd2d8dbcd0f6da545e93cb0e4740 279 PIRSF PIRSF007580 1 278 2.7E-61 T 09-03-2017 IPR016516 Uncharacterised conserved protein UCP07580 NA29_RS07000 7f95cd2d8dbcd0f6da545e93cb0e4740 279 Pfam PF10118 Predicted metal-dependent hydrolase 10 258 4.6E-72 T 09-03-2017 IPR016516 Uncharacterised conserved protein UCP07580 NA29_RS12000 0fdcc6b6b4480de4d0925b9fafaa10a4 660 Gene3D G3DSA:3.30.450.20 306 425 2.7E-22 T 09-03-2017 NA29_RS12000 0fdcc6b6b4480de4d0925b9fafaa10a4 660 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 562 650 6.6E-9 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS12000 0fdcc6b6b4480de4d0925b9fafaa10a4 660 Pfam PF07730 Histidine kinase 455 520 3.1E-15 T 09-03-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NA29_RS12000 0fdcc6b6b4480de4d0925b9fafaa10a4 660 SUPERFAMILY SSF55785 321 435 3.87E-23 T 09-03-2017 IPR000014 PAS domain NA29_RS12000 0fdcc6b6b4480de4d0925b9fafaa10a4 660 SUPERFAMILY SSF55874 542 650 4.32E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS12000 0fdcc6b6b4480de4d0925b9fafaa10a4 660 SMART SM00387 559 651 2.8E-12 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS12000 0fdcc6b6b4480de4d0925b9fafaa10a4 660 Gene3D G3DSA:3.30.565.10 543 651 1.7E-10 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS12000 0fdcc6b6b4480de4d0925b9fafaa10a4 660 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 307 433 1.2E-15 T 09-03-2017 IPR000014 PAS domain NA29_RS12000 0fdcc6b6b4480de4d0925b9fafaa10a4 660 SMART SM00091 310 376 1.6E-7 T 09-03-2017 IPR000014 PAS domain NA29_RS12000 0fdcc6b6b4480de4d0925b9fafaa10a4 660 Pfam PF08448 PAS fold 318 429 7.0E-10 T 09-03-2017 IPR013656 PAS fold-4 NA29_RS15120 91a5658c40a06c6747a55b6882311671 175 Gene3D G3DSA:3.10.50.40 2 69 7.1E-9 T 09-03-2017 NA29_RS15120 91a5658c40a06c6747a55b6882311671 175 Gene3D G3DSA:3.10.50.40 125 144 7.1E-9 T 09-03-2017 NA29_RS15120 91a5658c40a06c6747a55b6882311671 175 SUPERFAMILY SSF54534 2 143 4.52E-28 T 09-03-2017 NA29_RS18900 43250305d15dc1af6b9a56bf44d7cba4 313 Gene3D G3DSA:3.40.190.10 200 271 1.9E-9 T 09-03-2017 NA29_RS18900 43250305d15dc1af6b9a56bf44d7cba4 313 SUPERFAMILY SSF53850 92 304 1.25E-29 T 09-03-2017 NA29_RS18900 43250305d15dc1af6b9a56bf44d7cba4 313 Gene3D G3DSA:3.40.190.10 93 199 7.7E-18 T 09-03-2017 NA29_RS18900 43250305d15dc1af6b9a56bf44d7cba4 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.6E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18900 43250305d15dc1af6b9a56bf44d7cba4 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.9E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18900 43250305d15dc1af6b9a56bf44d7cba4 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.9E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18900 43250305d15dc1af6b9a56bf44d7cba4 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.9E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18900 43250305d15dc1af6b9a56bf44d7cba4 313 Gene3D G3DSA:1.10.10.10 1 83 1.2E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18900 43250305d15dc1af6b9a56bf44d7cba4 313 SUPERFAMILY SSF46785 3 112 7.14E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18900 43250305d15dc1af6b9a56bf44d7cba4 313 Pfam PF03466 LysR substrate binding domain 91 301 7.4E-32 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS20765 be7cdd569f642ab21a2232b59a12a051 282 Gene3D G3DSA:2.60.120.10 37 92 5.8E-5 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS20765 be7cdd569f642ab21a2232b59a12a051 282 SMART SM00342 178 260 2.5E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS20765 be7cdd569f642ab21a2232b59a12a051 282 Pfam PF12833 Helix-turn-helix domain 184 260 1.9E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS20765 be7cdd569f642ab21a2232b59a12a051 282 Gene3D G3DSA:1.10.10.60 157 215 7.1E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS20765 be7cdd569f642ab21a2232b59a12a051 282 SUPERFAMILY SSF51182 38 195 1.07E-10 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS20765 be7cdd569f642ab21a2232b59a12a051 282 SUPERFAMILY SSF46689 215 259 3.81E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS20765 be7cdd569f642ab21a2232b59a12a051 282 Gene3D G3DSA:1.10.10.60 216 259 5.3E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS06550 722b44b67e821807f2c312ad229e6cf9 293 Gene3D G3DSA:3.40.50.720 3 163 3.5E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS06550 722b44b67e821807f2c312ad229e6cf9 293 Gene3D G3DSA:1.10.1040.10 164 289 1.5E-35 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS06550 722b44b67e821807f2c312ad229e6cf9 293 PIRSF PIRSF000103 1 292 1.2E-66 T 09-03-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 NA29_RS06550 722b44b67e821807f2c312ad229e6cf9 293 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 09-03-2017 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 NA29_RS06550 722b44b67e821807f2c312ad229e6cf9 293 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 162 6.7E-40 T 09-03-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 NA29_RS06550 722b44b67e821807f2c312ad229e6cf9 293 SUPERFAMILY SSF48179 164 289 1.59E-30 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS06550 722b44b67e821807f2c312ad229e6cf9 293 SUPERFAMILY SSF51735 1 162 4.2E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS06550 722b44b67e821807f2c312ad229e6cf9 293 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 287 6.2E-35 T 09-03-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 NA29_RS17995 73822b125241718a39b4b102295a8632 268 Gene3D G3DSA:3.30.950.10 128 254 1.2E-27 T 09-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 NA29_RS17995 73822b125241718a39b4b102295a8632 268 Gene3D G3DSA:3.40.1010.10 12 127 9.4E-42 T 09-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 NA29_RS17995 73822b125241718a39b4b102295a8632 268 SUPERFAMILY SSF53790 11 248 1.83E-62 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 NA29_RS17995 73822b125241718a39b4b102295a8632 268 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 220 1.9E-44 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 NA29_RS17995 73822b125241718a39b4b102295a8632 268 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 13 244 4.9E-81 T 09-03-2017 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 NA29_RS17995 73822b125241718a39b4b102295a8632 268 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 92 125 - T 09-03-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 NA29_RS17995 73822b125241718a39b4b102295a8632 268 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 18 32 - T 09-03-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 09-03-2017 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 SUPERFAMILY SSF81442 43 558 1.31E-175 T 09-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 8.3E-136 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 Gene3D G3DSA:1.20.210.10 39 589 9.5E-186 T 09-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 6.1E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 6.1E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 6.1E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 6.1E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 6.1E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 6.1E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 6.1E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 6.1E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 6.1E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 6.1E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 6.1E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 6.1E-94 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16975 6adcbaf4fdfcc788d26c767834afe068 668 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 09-03-2017 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 NA29_RS23400 693469dc7f46de5fac56e22fab271192 461 PIRSF PIRSF038885 4 461 2.4E-153 T 09-03-2017 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 NA29_RS23400 693469dc7f46de5fac56e22fab271192 461 SUPERFAMILY SSF81648 360 446 2.22E-21 T 09-03-2017 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 NA29_RS23400 693469dc7f46de5fac56e22fab271192 461 SUPERFAMILY SSF81648 288 312 2.22E-21 T 09-03-2017 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 NA29_RS23400 693469dc7f46de5fac56e22fab271192 461 SUPERFAMILY SSF81342 16 286 7.53E-98 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 NA29_RS23400 693469dc7f46de5fac56e22fab271192 461 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 285 434 2.8E-41 T 09-03-2017 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 NA29_RS23400 693469dc7f46de5fac56e22fab271192 461 Gene3D G3DSA:1.20.810.10 362 450 7.2E-159 T 09-03-2017 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 NA29_RS23400 693469dc7f46de5fac56e22fab271192 461 Gene3D G3DSA:1.20.810.10 14 314 7.2E-159 T 09-03-2017 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 NA29_RS23400 693469dc7f46de5fac56e22fab271192 461 Pfam PF00033 Cytochrome b/b6/petB 32 219 1.3E-68 T 09-03-2017 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 NA29_RS25055 a90be37485674612f175f56282450ab5 410 Gene3D G3DSA:1.20.1250.20 14 198 2.4E-31 T 09-03-2017 NA29_RS25055 a90be37485674612f175f56282450ab5 410 Gene3D G3DSA:1.20.1250.20 214 402 3.6E-5 T 09-03-2017 NA29_RS25055 a90be37485674612f175f56282450ab5 410 Pfam PF07690 Major Facilitator Superfamily 21 361 4.9E-41 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS25055 a90be37485674612f175f56282450ab5 410 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 12 388 1.3E-100 T 09-03-2017 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 NA29_RS25055 a90be37485674612f175f56282450ab5 410 SUPERFAMILY SSF103473 10 402 6.67E-62 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 Hamap MF_01953 Urease subunit alpha [ureC]. 1 566 57.904 T 09-03-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 SUPERFAMILY SSF51338 2 176 3.89E-64 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 SUPERFAMILY SSF51338 421 476 2.5E-6 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 Pfam PF01979 Amidohydrolase family 124 452 1.4E-80 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 ProSitePatterns PS00145 Urease active site. 316 332 - T 09-03-2017 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 294 311 6.4E-35 T 09-03-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 426 439 6.4E-35 T 09-03-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 333 349 6.4E-35 T 09-03-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 400 415 6.4E-35 T 09-03-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 ProSitePatterns PS01120 Urease nickel ligands signature. 126 139 - T 09-03-2017 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 Gene3D G3DSA:2.30.40.10 67 142 5.5E-14 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 Pfam PF00449 Urease alpha-subunit, N-terminal domain 1 118 1.2E-55 T 09-03-2017 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 SUPERFAMILY SSF51556 128 431 1.15E-202 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 SUPERFAMILY SSF51556 480 566 1.15E-202 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 Gene3D G3DSA:3.20.20.140 487 564 4.0E-214 T 09-03-2017 NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 Gene3D G3DSA:3.20.20.140 143 428 4.0E-214 T 09-03-2017 NA29_RS01380 308815a4553311c5b9d9e17c8a994b4e 566 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 2 566 1.5E-299 T 09-03-2017 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS17850 f00ea5d4daefa2ac3a6b9e2ee02948b4 195 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 116 168 4.1E-12 T 09-03-2017 IPR018637 Domain of unknown function DUF2059 NA29_RS16360 a5b0601ebf8215ffca7c3d3c1c126364 185 Pfam PF14282 FlxA-like protein 109 167 2.8E-6 T 09-03-2017 IPR025577 FlxA-like protein NA29_RS17010 24219e3ebd5939b2fbcec77804cb7d8d 307 Gene3D G3DSA:1.10.10.10 9 86 4.3E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17010 24219e3ebd5939b2fbcec77804cb7d8d 307 Gene3D G3DSA:3.40.190.10 98 183 1.2E-17 T 09-03-2017 NA29_RS17010 24219e3ebd5939b2fbcec77804cb7d8d 307 Pfam PF03466 LysR substrate binding domain 94 300 1.4E-36 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS17010 24219e3ebd5939b2fbcec77804cb7d8d 307 SUPERFAMILY SSF53850 94 303 9.62E-39 T 09-03-2017 NA29_RS17010 24219e3ebd5939b2fbcec77804cb7d8d 307 Gene3D G3DSA:3.40.190.10 184 266 1.5E-16 T 09-03-2017 NA29_RS17010 24219e3ebd5939b2fbcec77804cb7d8d 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 4.1E-13 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS17010 24219e3ebd5939b2fbcec77804cb7d8d 307 SUPERFAMILY SSF46785 8 117 3.18E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11425 8262950d9fb42c64e3e288d9fafb828c 320 SUPERFAMILY SSF46785 5 116 5.34E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11425 8262950d9fb42c64e3e288d9fafb828c 320 Pfam PF03466 LysR substrate binding domain 97 292 9.1E-23 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS11425 8262950d9fb42c64e3e288d9fafb828c 320 SUPERFAMILY SSF53850 98 294 1.52E-24 T 09-03-2017 NA29_RS11425 8262950d9fb42c64e3e288d9fafb828c 320 Gene3D G3DSA:1.10.10.10 7 88 1.6E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11425 8262950d9fb42c64e3e288d9fafb828c 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.9E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11425 8262950d9fb42c64e3e288d9fafb828c 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.9E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11425 8262950d9fb42c64e3e288d9fafb828c 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.9E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11425 8262950d9fb42c64e3e288d9fafb828c 320 Gene3D G3DSA:3.40.190.10 98 184 9.2E-9 T 09-03-2017 NA29_RS11425 8262950d9fb42c64e3e288d9fafb828c 320 Gene3D G3DSA:3.40.190.10 185 268 5.6E-10 T 09-03-2017 NA29_RS11425 8262950d9fb42c64e3e288d9fafb828c 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 1.2E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16660 9cd8e7e11dd53be8337729a9398404ca 553 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 531 1.2E-24 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS16660 9cd8e7e11dd53be8337729a9398404ca 553 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS16660 9cd8e7e11dd53be8337729a9398404ca 553 Pfam PF00501 AMP-binding enzyme 42 443 6.1E-76 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS16660 9cd8e7e11dd53be8337729a9398404ca 553 SUPERFAMILY SSF56801 29 543 6.67E-140 T 09-03-2017 NA29_RS16660 9cd8e7e11dd53be8337729a9398404ca 553 Gene3D G3DSA:3.40.50.980 42 200 4.9E-36 T 09-03-2017 NA29_RS16660 9cd8e7e11dd53be8337729a9398404ca 553 Gene3D G3DSA:3.30.300.30 439 540 7.0E-30 T 09-03-2017 NA29_RS16660 9cd8e7e11dd53be8337729a9398404ca 553 Gene3D G3DSA:2.30.38.10 363 437 4.1E-10 T 09-03-2017 NA29_RS16660 9cd8e7e11dd53be8337729a9398404ca 553 Gene3D G3DSA:3.40.50.980 201 355 3.4E-29 T 09-03-2017 NA29_RS17040 aa9d37a5a50fe8691ab1bcd43f3f3037 671 SMART SM00382 30 217 4.7E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS17040 aa9d37a5a50fe8691ab1bcd43f3f3037 671 Pfam PF02687 FtsX-like permease family 550 664 8.1E-19 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 NA29_RS17040 aa9d37a5a50fe8691ab1bcd43f3f3037 671 Gene3D G3DSA:3.40.50.300 1 222 1.5E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17040 aa9d37a5a50fe8691ab1bcd43f3f3037 671 Pfam PF12704 MacB-like periplasmic core domain 295 514 2.2E-39 T 09-03-2017 IPR025857 MacB-like periplasmic core domain NA29_RS17040 aa9d37a5a50fe8691ab1bcd43f3f3037 671 Pfam PF00005 ABC transporter 21 169 2.1E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS17040 aa9d37a5a50fe8691ab1bcd43f3f3037 671 SUPERFAMILY SSF52540 1 230 1.86E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17040 aa9d37a5a50fe8691ab1bcd43f3f3037 671 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS20395 689b38249e4437eb61c4acddf8a9b7f8 954 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 2 950 18.733 T 09-03-2017 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 NA29_RS20395 689b38249e4437eb61c4acddf8a9b7f8 954 Gene3D G3DSA:3.30.460.10 656 816 1.2E-47 T 09-03-2017 NA29_RS20395 689b38249e4437eb61c4acddf8a9b7f8 954 Gene3D G3DSA:3.30.460.10 99 280 6.3E-55 T 09-03-2017 NA29_RS20395 689b38249e4437eb61c4acddf8a9b7f8 954 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 69 263 8.9E-55 T 09-03-2017 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 NA29_RS20395 689b38249e4437eb61c4acddf8a9b7f8 954 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 569 810 1.4E-58 T 09-03-2017 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 NA29_RS20395 689b38249e4437eb61c4acddf8a9b7f8 954 SUPERFAMILY SSF81301 542 820 1.14E-71 T 09-03-2017 NA29_RS20395 689b38249e4437eb61c4acddf8a9b7f8 954 SUPERFAMILY SSF81301 8 287 3.84E-65 T 09-03-2017 NA29_RS20395 689b38249e4437eb61c4acddf8a9b7f8 954 SUPERFAMILY SSF81593 288 442 1.18E-42 T 09-03-2017 NA29_RS20395 689b38249e4437eb61c4acddf8a9b7f8 954 Pfam PF08335 GlnD PII-uridylyltransferase 832 920 1.0E-9 T 09-03-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 NA29_RS20395 689b38249e4437eb61c4acddf8a9b7f8 954 Pfam PF08335 GlnD PII-uridylyltransferase 298 442 6.8E-43 T 09-03-2017 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 NA29_RS20395 689b38249e4437eb61c4acddf8a9b7f8 954 SUPERFAMILY SSF81593 822 948 6.91E-31 T 09-03-2017 NA29_RS07090 96e634f2b56fb93eb19fc77d19e48ac4 405 SUPERFAMILY SSF52402 9 142 2.33E-12 T 09-03-2017 NA29_RS07090 96e634f2b56fb93eb19fc77d19e48ac4 405 SUPERFAMILY SSF52402 241 340 2.33E-12 T 09-03-2017 NA29_RS07090 96e634f2b56fb93eb19fc77d19e48ac4 405 Pfam PF00733 Asparagine synthase 10 87 2.3E-5 T 09-03-2017 IPR001962 Asparagine synthase GO:0004066|GO:0006529 NA29_RS07090 96e634f2b56fb93eb19fc77d19e48ac4 405 Gene3D G3DSA:3.40.50.620 236 355 5.1E-11 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS07090 96e634f2b56fb93eb19fc77d19e48ac4 405 Gene3D G3DSA:3.40.50.620 11 155 5.1E-11 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS04255 7f02d1e85f4b6563b9b96196b89d258e 377 Gene3D G3DSA:3.20.20.140 5 374 4.7E-104 T 09-03-2017 NA29_RS04255 7f02d1e85f4b6563b9b96196b89d258e 377 Pfam PF04909 Amidohydrolase 177 374 3.0E-6 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS04255 7f02d1e85f4b6563b9b96196b89d258e 377 SUPERFAMILY SSF51556 7 171 8.5E-11 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS04255 7f02d1e85f4b6563b9b96196b89d258e 377 SUPERFAMILY SSF51556 198 373 8.5E-11 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS22165 8924dd8a74eff417aa280b0b27074095 320 Gene3D G3DSA:1.20.58.340 243 319 3.7E-26 T 09-03-2017 NA29_RS22165 8924dd8a74eff417aa280b0b27074095 320 Pfam PF01544 CorA-like Mg2+ transporter protein 29 314 3.9E-55 T 09-03-2017 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 NA29_RS22165 8924dd8a74eff417aa280b0b27074095 320 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 14 319 9.8E-68 T 09-03-2017 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 NA29_RS22165 8924dd8a74eff417aa280b0b27074095 320 SUPERFAMILY SSF143865 1 258 1.44E-38 T 09-03-2017 NA29_RS22165 8924dd8a74eff417aa280b0b27074095 320 SUPERFAMILY SSF144083 254 316 8.37E-20 T 09-03-2017 NA29_RS23245 3935f705109c343db6f7f066b34f1745 318 Pfam PF04865 Baseplate J-like protein 120 264 2.1E-20 T 09-03-2017 IPR006949 Baseplate protein J-like NA29_RS23245 3935f705109c343db6f7f066b34f1745 318 PIRSF PIRSF020481 2 303 3.2E-95 T 09-03-2017 IPR014507 Baseplate assembly protein J, predicted NA29_RS23680 4f2002b8a7b16d9340bdd5a49b73c09e 110 Gene3D G3DSA:3.30.920.10 1 107 2.8E-30 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 NA29_RS23680 4f2002b8a7b16d9340bdd5a49b73c09e 110 Pfam PF01491 Frataxin-like domain 1 104 1.2E-26 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 NA29_RS23680 4f2002b8a7b16d9340bdd5a49b73c09e 110 SUPERFAMILY SSF55387 1 107 1.59E-34 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 NA29_RS23680 4f2002b8a7b16d9340bdd5a49b73c09e 110 SMART SM01219 1 108 2.1E-50 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 NA29_RS23680 4f2002b8a7b16d9340bdd5a49b73c09e 110 Hamap MF_00142 Protein CyaY [cyaY]. 1 107 26.889 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 NA29_RS23680 4f2002b8a7b16d9340bdd5a49b73c09e 110 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 106 2.5E-38 T 09-03-2017 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 NA29_RS23680 4f2002b8a7b16d9340bdd5a49b73c09e 110 ProSitePatterns PS01344 Frataxin family signature. 52 66 - T 09-03-2017 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 NA29_RS10890 86693496afaf951243b07f09df959357 437 PRINTS PR00762 Chloride channel signature 361 377 6.9E-10 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS10890 86693496afaf951243b07f09df959357 437 PRINTS PR00762 Chloride channel signature 113 132 6.9E-10 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS10890 86693496afaf951243b07f09df959357 437 PRINTS PR00762 Chloride channel signature 164 183 6.9E-10 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS10890 86693496afaf951243b07f09df959357 437 PRINTS PR00762 Chloride channel signature 334 354 6.9E-10 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS10890 86693496afaf951243b07f09df959357 437 Gene3D G3DSA:1.10.3080.10 10 420 2.1E-48 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 NA29_RS10890 86693496afaf951243b07f09df959357 437 SUPERFAMILY SSF81340 11 414 2.62E-67 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 NA29_RS10890 86693496afaf951243b07f09df959357 437 Pfam PF00654 Voltage gated chloride channel 74 413 1.0E-63 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS24730 511a51a8d146698b4f3cd01fad1be651 293 SUPERFAMILY SSF161098 89 275 1.11E-28 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS24730 511a51a8d146698b4f3cd01fad1be651 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 283 1.0E-24 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS24730 511a51a8d146698b4f3cd01fad1be651 293 Gene3D G3DSA:1.10.3720.10 87 283 3.9E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS03980 e5a7576e5717b3d152b32b28b26b04f3 536 Gene3D G3DSA:1.10.10.10 19 88 1.2E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03980 e5a7576e5717b3d152b32b28b26b04f3 536 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 87 2.6E-12 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS03980 e5a7576e5717b3d152b32b28b26b04f3 536 Gene3D G3DSA:3.40.640.10 212 415 2.2E-50 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS03980 e5a7576e5717b3d152b32b28b26b04f3 536 SMART SM00345 28 87 1.2E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS03980 e5a7576e5717b3d152b32b28b26b04f3 536 SUPERFAMILY SSF46785 18 88 4.0E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03980 e5a7576e5717b3d152b32b28b26b04f3 536 Pfam PF00155 Aminotransferase class I and II 230 508 1.2E-13 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS03980 e5a7576e5717b3d152b32b28b26b04f3 536 SUPERFAMILY SSF53383 151 527 1.94E-80 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS03980 e5a7576e5717b3d152b32b28b26b04f3 536 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 8.2E-6 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS03980 e5a7576e5717b3d152b32b28b26b04f3 536 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 8.2E-6 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS13780 1932caf90d6c239049c8a601b877759f 306 Gene3D G3DSA:3.40.190.10 178 257 2.3E-25 T 09-03-2017 NA29_RS13780 1932caf90d6c239049c8a601b877759f 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.3E-14 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13780 1932caf90d6c239049c8a601b877759f 306 Gene3D G3DSA:1.10.10.10 3 85 5.0E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13780 1932caf90d6c239049c8a601b877759f 306 SUPERFAMILY SSF53850 91 295 2.33E-51 T 09-03-2017 NA29_RS13780 1932caf90d6c239049c8a601b877759f 306 Gene3D G3DSA:3.40.190.10 93 177 5.6E-30 T 09-03-2017 NA29_RS13780 1932caf90d6c239049c8a601b877759f 306 SUPERFAMILY SSF46785 2 113 8.71E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13780 1932caf90d6c239049c8a601b877759f 306 Pfam PF03466 LysR substrate binding domain 90 291 3.9E-48 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS08900 88d6456c28dae79df36e0393109982b8 225 SMART SM00382 17 224 0.0032 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS08900 88d6456c28dae79df36e0393109982b8 225 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 18 196 7.6E-71 T 09-03-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 NA29_RS08900 88d6456c28dae79df36e0393109982b8 225 Gene3D G3DSA:3.30.63.10 58 99 1.9E-25 T 09-03-2017 NA29_RS08900 88d6456c28dae79df36e0393109982b8 225 Gene3D G3DSA:3.40.50.300 100 214 9.3E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08900 88d6456c28dae79df36e0393109982b8 225 Pfam PF00625 Guanylate kinase 20 196 6.0E-47 T 09-03-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit NA29_RS08900 88d6456c28dae79df36e0393109982b8 225 Hamap MF_00328 Guanylate kinase [gmk]. 16 199 35.2 T 09-03-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 NA29_RS08900 88d6456c28dae79df36e0393109982b8 225 Gene3D G3DSA:3.40.50.300 17 57 1.3E-4 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08900 88d6456c28dae79df36e0393109982b8 225 SUPERFAMILY SSF52540 16 201 3.3E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08900 88d6456c28dae79df36e0393109982b8 225 ProSitePatterns PS00856 Guanylate kinase-like signature. 52 69 - T 09-03-2017 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 NA29_RS08900 88d6456c28dae79df36e0393109982b8 225 SMART SM00072 17 199 1.7E-58 T 09-03-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit NA29_RS15020 092ad3314b3437238893cb1f9a1b4e53 683 Pfam PF00361 Proton-conducting membrane transporter 137 420 8.2E-86 T 09-03-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15020 092ad3314b3437238893cb1f9a1b4e53 683 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 68 125 1.3E-26 T 09-03-2017 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15020 092ad3314b3437238893cb1f9a1b4e53 683 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 491 512 1.8E-17 T 09-03-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NA29_RS15020 092ad3314b3437238893cb1f9a1b4e53 683 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 88 108 1.8E-17 T 09-03-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NA29_RS15020 092ad3314b3437238893cb1f9a1b4e53 683 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 428 450 1.8E-17 T 09-03-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NA29_RS15020 092ad3314b3437238893cb1f9a1b4e53 683 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 62 86 1.8E-17 T 09-03-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NA29_RS15020 092ad3314b3437238893cb1f9a1b4e53 683 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 274 296 1.8E-17 T 09-03-2017 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 NA29_RS15020 092ad3314b3437238893cb1f9a1b4e53 683 Pfam PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus 484 610 1.3E-6 T 09-03-2017 IPR002128 NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal NA29_RS15020 092ad3314b3437238893cb1f9a1b4e53 683 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 114 134 1.2E-66 T 09-03-2017 NA29_RS15020 092ad3314b3437238893cb1f9a1b4e53 683 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 324 336 1.2E-66 T 09-03-2017 NA29_RS15020 092ad3314b3437238893cb1f9a1b4e53 683 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 429 448 1.2E-66 T 09-03-2017 NA29_RS15020 092ad3314b3437238893cb1f9a1b4e53 683 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 256 282 1.2E-66 T 09-03-2017 NA29_RS15020 092ad3314b3437238893cb1f9a1b4e53 683 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 86 111 1.2E-66 T 09-03-2017 NA29_RS15020 092ad3314b3437238893cb1f9a1b4e53 683 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 161 182 1.2E-66 T 09-03-2017 NA29_RS15020 092ad3314b3437238893cb1f9a1b4e53 683 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 234 255 1.2E-66 T 09-03-2017 NA29_RS15020 092ad3314b3437238893cb1f9a1b4e53 683 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 677 9.0E-248 T 09-03-2017 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS08705 8b7d8dc6eb8ac8a9270010e205964b7d 433 Pfam PF00083 Sugar (and other) transporter 276 433 2.0E-11 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS08705 8b7d8dc6eb8ac8a9270010e205964b7d 433 Pfam PF00083 Sugar (and other) transporter 24 225 1.0E-21 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS08705 8b7d8dc6eb8ac8a9270010e205964b7d 433 Gene3D G3DSA:1.20.1250.20 21 225 2.2E-28 T 09-03-2017 NA29_RS08705 8b7d8dc6eb8ac8a9270010e205964b7d 433 Gene3D G3DSA:1.20.1250.20 249 429 9.3E-20 T 09-03-2017 NA29_RS08705 8b7d8dc6eb8ac8a9270010e205964b7d 433 SUPERFAMILY SSF103473 18 431 1.29E-61 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS08705 8b7d8dc6eb8ac8a9270010e205964b7d 433 ProSitePatterns PS00217 Sugar transport proteins signature 2. 130 155 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 465 573 2.5E-32 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 Pfam PF00364 Biotin-requiring enzyme 5 74 2.7E-18 T 09-03-2017 IPR000089 Biotin/lipoyl attachment NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 124 575 1.2E-140 T 09-03-2017 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 PIRSF PIRSF000350 36 584 4.2E-80 T 09-03-2017 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 SUPERFAMILY SSF51230 2 94 1.81E-21 T 09-03-2017 IPR011053 Single hybrid motif NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 159 169 - T 09-03-2017 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 526 541 8.6E-69 T 09-03-2017 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 125 147 8.6E-69 T 09-03-2017 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 383 397 8.6E-69 T 09-03-2017 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 173 8.6E-69 T 09-03-2017 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 294 319 8.6E-69 T 09-03-2017 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 259 268 8.6E-69 T 09-03-2017 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 548 568 8.6E-69 T 09-03-2017 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 426 433 8.6E-69 T 09-03-2017 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 461 482 8.6E-69 T 09-03-2017 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 Gene3D G3DSA:3.50.50.60 386 460 4.5E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 Gene3D G3DSA:2.40.50.100 5 79 5.4E-20 T 09-03-2017 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 SUPERFAMILY SSF55424 464 580 2.41E-36 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 Gene3D G3DSA:3.50.50.60 123 267 1.8E-37 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 Gene3D G3DSA:3.30.390.30 461 576 7.4E-43 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 125 446 6.7E-56 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 SUPERFAMILY SSF51905 121 455 3.09E-53 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 382 398 1.2E-39 T 09-03-2017 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 126 145 1.2E-39 T 09-03-2017 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 274 1.2E-39 T 09-03-2017 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 312 1.2E-39 T 09-03-2017 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 411 433 1.2E-39 T 09-03-2017 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 09-03-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 NA29_RS14305 bdda3cdc5ecca4b4111929f88eadf8e7 590 Gene3D G3DSA:3.50.50.60 275 385 7.5E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS19520 629c23bcc46ce0b6aef36494b2192b9b 194 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 64 96 7.9E-11 T 09-03-2017 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS19520 629c23bcc46ce0b6aef36494b2192b9b 194 Pfam PF02627 Carboxymuconolactone decarboxylase family 46 131 1.6E-13 T 09-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS19520 629c23bcc46ce0b6aef36494b2192b9b 194 SUPERFAMILY SSF69118 5 191 8.77E-58 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS19520 629c23bcc46ce0b6aef36494b2192b9b 194 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 7 183 6.1E-70 T 09-03-2017 IPR010195 Uncharacterised peroxidase-related NA29_RS19520 629c23bcc46ce0b6aef36494b2192b9b 194 Gene3D G3DSA:1.20.1290.10 66 186 7.8E-35 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS19520 629c23bcc46ce0b6aef36494b2192b9b 194 Gene3D G3DSA:1.20.5.810 14 65 1.8E-29 T 09-03-2017 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 711 725 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 844 851 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 SUPERFAMILY SSF52440 558 677 8.2E-50 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 171 185 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 304 311 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 Gene3D G3DSA:3.30.470.20 747 940 7.9E-79 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 Gene3D G3DSA:3.30.470.20 207 406 1.4E-75 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1074 13.39 T 09-03-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 429 549 5.4E-39 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 Gene3D G3DSA:3.30.1490.20 689 746 5.8E-26 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 387 405 7.6E-66 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 175 187 7.6E-66 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 246 263 7.6E-66 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 304 333 7.6E-66 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 7.6E-66 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 211 230 7.6E-66 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 7.6E-66 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 SUPERFAMILY SSF56059 128 408 6.36E-106 T 09-03-2017 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 SUPERFAMILY SSF52335 941 1076 1.83E-38 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 Gene3D G3DSA:3.40.50.1380 943 1077 2.6E-41 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 SMART SM01096 426 549 3.1E-72 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1058 0.0 T 09-03-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1069 13.193 T 09-03-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 SMART SM00851 961 1048 1.4E-30 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 SUPERFAMILY SSF48108 403 556 2.22E-52 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 Gene3D G3DSA:1.10.1030.10 407 540 3.4E-51 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 Gene3D G3DSA:3.30.1490.20 143 206 4.4E-24 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 SUPERFAMILY SSF56059 675 939 6.72E-103 T 09-03-2017 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 Pfam PF02142 MGS-like domain 962 1048 1.9E-20 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 675 880 3.6E-35 T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 341 7.3E-70 T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 Gene3D G3DSA:3.40.50.20 3 108 5.6E-46 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 Gene3D G3DSA:3.40.50.20 541 664 4.7E-62 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS07255 80bad87b104d61ead7f7217ed1f8afa3 1080 SUPERFAMILY SSF52440 1 127 4.32E-52 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS07505 7145fde083aa2641a5d647786b6a0304 302 SUPERFAMILY SSF90002 225 293 1.16E-10 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS07505 7145fde083aa2641a5d647786b6a0304 302 Gene3D G3DSA:3.30.1220.10 222 284 3.8E-10 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS07505 7145fde083aa2641a5d647786b6a0304 302 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 173 2.2E-33 T 09-03-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain NA29_RS07505 7145fde083aa2641a5d647786b6a0304 302 Gene3D G3DSA:3.40.50.300 9 192 5.4E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07505 7145fde083aa2641a5d647786b6a0304 302 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 226 284 7.8E-8 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS07505 7145fde083aa2641a5d647786b6a0304 302 SUPERFAMILY SSF52540 8 181 2.49E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02950 a85f93057078f97b584feaf7b8659d11 366 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS02950 a85f93057078f97b584feaf7b8659d11 366 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 11 363 4.5E-155 T 09-03-2017 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 NA29_RS02950 a85f93057078f97b584feaf7b8659d11 366 Gene3D G3DSA:3.40.50.300 5 246 4.2E-80 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02950 a85f93057078f97b584feaf7b8659d11 366 Pfam PF00005 ABC transporter 28 170 2.4E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS02950 a85f93057078f97b584feaf7b8659d11 366 Pfam PF08402 TOBE domain 284 363 3.8E-8 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 NA29_RS02950 a85f93057078f97b584feaf7b8659d11 366 SUPERFAMILY SSF52540 13 251 5.46E-86 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02950 a85f93057078f97b584feaf7b8659d11 366 SMART SM00382 37 220 1.2E-19 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS02950 a85f93057078f97b584feaf7b8659d11 366 SUPERFAMILY SSF50331 246 363 1.36E-13 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS02950 a85f93057078f97b584feaf7b8659d11 366 Gene3D G3DSA:2.40.50.100 302 362 4.3E-4 T 09-03-2017 NA29_RS10905 deeb068b1c4022516dbbbc7363745efb 385 SUPERFAMILY SSF53807 39 353 4.32E-47 T 09-03-2017 NA29_RS10905 deeb068b1c4022516dbbbc7363745efb 385 Gene3D G3DSA:3.40.50.1980 202 350 1.9E-23 T 09-03-2017 NA29_RS10905 deeb068b1c4022516dbbbc7363745efb 385 Pfam PF01497 Periplasmic binding protein 102 327 2.7E-20 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 NA29_RS10905 deeb068b1c4022516dbbbc7363745efb 385 Gene3D G3DSA:3.40.50.1980 56 194 2.0E-15 T 09-03-2017 NA29_RS14775 5327b50dba03a0d3ea87c67aa463094c 290 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 209 226 2.3E-30 T 09-03-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NA29_RS14775 5327b50dba03a0d3ea87c67aa463094c 290 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 251 271 2.3E-30 T 09-03-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NA29_RS14775 5327b50dba03a0d3ea87c67aa463094c 290 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 228 246 2.3E-30 T 09-03-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NA29_RS14775 5327b50dba03a0d3ea87c67aa463094c 290 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 47 61 2.3E-30 T 09-03-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NA29_RS14775 5327b50dba03a0d3ea87c67aa463094c 290 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 82 102 2.3E-30 T 09-03-2017 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 NA29_RS14775 5327b50dba03a0d3ea87c67aa463094c 290 Gene3D G3DSA:3.40.50.150 28 275 1.1E-68 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS14775 5327b50dba03a0d3ea87c67aa463094c 290 SUPERFAMILY SSF53335 24 271 1.37E-68 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS14775 5327b50dba03a0d3ea87c67aa463094c 290 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 51 57 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NA29_RS14775 5327b50dba03a0d3ea87c67aa463094c 290 Pfam PF01555 DNA methylase 48 267 3.8E-50 T 09-03-2017 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 NA29_RS09985 7437cbd5608d17a076009f5271f29936 272 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 64 236 1.6E-29 T 09-03-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 NA29_RS09985 7437cbd5608d17a076009f5271f29936 272 Gene3D G3DSA:1.10.150.210 74 125 2.9E-26 T 09-03-2017 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 NA29_RS09985 7437cbd5608d17a076009f5271f29936 272 Pfam PF12710 haloacid dehalogenase-like hydrolase 66 234 1.8E-17 T 09-03-2017 NA29_RS09985 7437cbd5608d17a076009f5271f29936 272 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 50 268 3.1E-68 T 09-03-2017 NA29_RS09985 7437cbd5608d17a076009f5271f29936 272 SUPERFAMILY SSF56784 61 269 1.14E-45 T 09-03-2017 IPR023214 HAD-like domain NA29_RS09985 7437cbd5608d17a076009f5271f29936 272 Gene3D G3DSA:3.40.50.1000 126 256 6.9E-39 T 09-03-2017 IPR023214 HAD-like domain NA29_RS07870 ae31860d33863d1df304739a2a925d54 75 SUPERFAMILY SSF64307 3 74 5.23E-24 T 09-03-2017 IPR001455 TusA-like domain NA29_RS07870 ae31860d33863d1df304739a2a925d54 75 Pfam PF01206 Sulfurtransferase TusA 5 74 8.8E-23 T 09-03-2017 IPR001455 TusA-like domain NA29_RS07870 ae31860d33863d1df304739a2a925d54 75 Gene3D G3DSA:3.30.110.40 1 74 2.2E-30 T 09-03-2017 IPR001455 TusA-like domain NA29_RS07870 ae31860d33863d1df304739a2a925d54 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 09-03-2017 IPR001455 TusA-like domain NA29_RS24950 0df89fb60836c452038c7a9753756ef8 225 Pfam PF13353 4Fe-4S single cluster domain 25 123 5.6E-6 T 09-03-2017 NA29_RS24950 0df89fb60836c452038c7a9753756ef8 225 SUPERFAMILY SSF102114 21 222 1.28E-32 T 09-03-2017 NA29_RS24950 0df89fb60836c452038c7a9753756ef8 225 Pfam PF04055 Radical SAM superfamily 22 189 2.0E-14 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 NA29_RS24950 0df89fb60836c452038c7a9753756ef8 225 Gene3D G3DSA:3.20.20.70 21 224 1.7E-34 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS16885 e4ec70f61c1e4ce470aed360e18fcdb5 634 Gene3D G3DSA:3.40.50.970 334 493 4.1E-39 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS16885 e4ec70f61c1e4ce470aed360e18fcdb5 634 Pfam PF02779 Transketolase, pyrimidine binding domain 319 477 9.1E-41 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain NA29_RS16885 e4ec70f61c1e4ce470aed360e18fcdb5 634 Gene3D G3DSA:3.40.50.970 239 333 8.3E-80 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS16885 e4ec70f61c1e4ce470aed360e18fcdb5 634 Gene3D G3DSA:3.40.50.970 20 196 8.3E-80 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS16885 e4ec70f61c1e4ce470aed360e18fcdb5 634 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 6 623 1.4E-255 T 09-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 NA29_RS16885 e4ec70f61c1e4ce470aed360e18fcdb5 634 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 4 624 45.903 T 09-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 NA29_RS16885 e4ec70f61c1e4ce470aed360e18fcdb5 634 SUPERFAMILY SSF52518 317 501 7.36E-60 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS16885 e4ec70f61c1e4ce470aed360e18fcdb5 634 ProSitePatterns PS00802 Transketolase signature 2. 424 440 - T 09-03-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 NA29_RS16885 e4ec70f61c1e4ce470aed360e18fcdb5 634 ProSitePatterns PS00801 Transketolase signature 1. 30 49 - T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 NA29_RS16885 e4ec70f61c1e4ce470aed360e18fcdb5 634 Gene3D G3DSA:3.40.50.920 494 623 1.2E-31 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NA29_RS16885 e4ec70f61c1e4ce470aed360e18fcdb5 634 SUPERFAMILY SSF52518 240 380 3.67E-80 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS16885 e4ec70f61c1e4ce470aed360e18fcdb5 634 SUPERFAMILY SSF52518 2 194 3.67E-80 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS16885 e4ec70f61c1e4ce470aed360e18fcdb5 634 SMART SM00861 318 482 1.7E-73 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain NA29_RS16885 e4ec70f61c1e4ce470aed360e18fcdb5 634 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 279 3.6E-119 T 09-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 NA29_RS16885 e4ec70f61c1e4ce470aed360e18fcdb5 634 SUPERFAMILY SSF52922 490 623 3.27E-28 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NA29_RS16885 e4ec70f61c1e4ce470aed360e18fcdb5 634 Pfam PF02780 Transketolase, C-terminal domain 506 615 6.0E-24 T 09-03-2017 IPR033248 Transketolase, C-terminal domain NA29_RS23020 ac9ed1440fe57b86ffa093c43c08a19c 506 SUPERFAMILY SSF53720 13 497 6.81E-160 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS23020 ac9ed1440fe57b86ffa093c43c08a19c 506 Gene3D G3DSA:3.40.309.10 270 469 2.6E-59 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS23020 ac9ed1440fe57b86ffa093c43c08a19c 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS23020 ac9ed1440fe57b86ffa093c43c08a19c 506 Pfam PF00171 Aldehyde dehydrogenase family 32 493 2.3E-160 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS23020 ac9ed1440fe57b86ffa093c43c08a19c 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS23020 ac9ed1440fe57b86ffa093c43c08a19c 506 Gene3D G3DSA:3.40.605.10 18 269 5.0E-92 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS15060 520598c351718b071205a5cf975e7af0 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 49.879 T 09-03-2017 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15060 520598c351718b071205a5cf975e7af0 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 09-03-2017 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15060 520598c351718b071205a5cf975e7af0 417 Gene3D G3DSA:1.10.645.10 6 404 3.4E-63 T 09-03-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15060 520598c351718b071205a5cf975e7af0 417 SUPERFAMILY SSF56762 16 417 2.49E-137 T 09-03-2017 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15060 520598c351718b071205a5cf975e7af0 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 9.5E-124 T 09-03-2017 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15060 520598c351718b071205a5cf975e7af0 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 1.5E-186 T 09-03-2017 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS18290 baf5d3eed4bb4f584922bcf0e3f93bc9 401 SUPERFAMILY SSF48264 25 378 4.45E-24 T 09-03-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 NA29_RS18290 baf5d3eed4bb4f584922bcf0e3f93bc9 401 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 348 357 - T 09-03-2017 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 NA29_RS18290 baf5d3eed4bb4f584922bcf0e3f93bc9 401 Gene3D G3DSA:1.10.630.10 24 373 2.5E-26 T 09-03-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 NA29_RS13920 14d02ab82e06cbbc7e22d3c4bd80405e 220 Pfam PF03352 Methyladenine glycosylase 6 181 1.7E-75 T 09-03-2017 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 NA29_RS13920 14d02ab82e06cbbc7e22d3c4bd80405e 220 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 2 180 1.7E-73 T 09-03-2017 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 NA29_RS13920 14d02ab82e06cbbc7e22d3c4bd80405e 220 Gene3D G3DSA:1.10.340.30 1 182 1.9E-78 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 NA29_RS13920 14d02ab82e06cbbc7e22d3c4bd80405e 220 SUPERFAMILY SSF48150 2 184 9.42E-75 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 NA29_RS12855 3a14358eefb4fb7b4cc30162a2eb6136 558 Gene3D G3DSA:3.30.70.270 389 545 3.1E-49 T 09-03-2017 NA29_RS12855 3a14358eefb4fb7b4cc30162a2eb6136 558 SUPERFAMILY SSF55073 392 545 1.73E-43 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS12855 3a14358eefb4fb7b4cc30162a2eb6136 558 SUPERFAMILY SSF103190 107 220 2.35E-7 T 09-03-2017 IPR029151 Periplasmic sensor domain-like NA29_RS12855 3a14358eefb4fb7b4cc30162a2eb6136 558 Gene3D G3DSA:3.30.450.20 133 210 1.0E-5 T 09-03-2017 NA29_RS12855 3a14358eefb4fb7b4cc30162a2eb6136 558 SMART SM00267 376 547 4.0E-48 T 09-03-2017 IPR000160 GGDEF domain NA29_RS12855 3a14358eefb4fb7b4cc30162a2eb6136 558 Pfam PF00990 Diguanylate cyclase, GGDEF domain 388 542 4.3E-40 T 09-03-2017 IPR000160 GGDEF domain NA29_RS12855 3a14358eefb4fb7b4cc30162a2eb6136 558 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 383 543 1.7E-44 T 09-03-2017 IPR000160 GGDEF domain NA29_RS10590 5d6f4fc45780018d4a79e6cd14656f65 413 Gene3D G3DSA:3.90.1150.10 9 59 3.4E-33 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS10590 5d6f4fc45780018d4a79e6cd14656f65 413 Gene3D G3DSA:3.90.1150.10 310 404 3.4E-33 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS10590 5d6f4fc45780018d4a79e6cd14656f65 413 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 226 263 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS10590 5d6f4fc45780018d4a79e6cd14656f65 413 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 406 1.6E-203 T 09-03-2017 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 NA29_RS10590 5d6f4fc45780018d4a79e6cd14656f65 413 SUPERFAMILY SSF53383 16 403 1.88E-124 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS10590 5d6f4fc45780018d4a79e6cd14656f65 413 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 404 45.144 T 09-03-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 NA29_RS10590 5d6f4fc45780018d4a79e6cd14656f65 413 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 403 3.9E-147 T 09-03-2017 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 NA29_RS10590 5d6f4fc45780018d4a79e6cd14656f65 413 Pfam PF00202 Aminotransferase class-III 20 403 8.0E-121 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS10590 5d6f4fc45780018d4a79e6cd14656f65 413 Gene3D G3DSA:3.40.640.10 60 306 1.2E-91 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS04530 7b5591e945a81050fe455db5d658422c 140 Gene3D G3DSA:3.30.300.20 41 138 1.1E-43 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta NA29_RS04530 7b5591e945a81050fe455db5d658422c 140 Gene3D G3DSA:2.20.25.10 1 35 2.9E-15 T 09-03-2017 NA29_RS04530 7b5591e945a81050fe455db5d658422c 140 SUPERFAMILY SSF82784 1 139 3.01E-39 T 09-03-2017 IPR003718 OsmC/Ohr family NA29_RS04530 7b5591e945a81050fe455db5d658422c 140 Pfam PF02566 OsmC-like protein 35 132 1.6E-17 T 09-03-2017 IPR003718 OsmC/Ohr family NA29_RS12985 4d0c83a6f834efaf8af7a57fe040f8c5 223 Gene3D G3DSA:1.10.10.10 4 72 2.1E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12985 4d0c83a6f834efaf8af7a57fe040f8c5 223 Gene3D G3DSA:1.20.120.530 75 213 1.8E-33 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS12985 4d0c83a6f834efaf8af7a57fe040f8c5 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 8.8E-15 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS12985 4d0c83a6f834efaf8af7a57fe040f8c5 223 SMART SM00895 81 202 8.9E-18 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS12985 4d0c83a6f834efaf8af7a57fe040f8c5 223 SUPERFAMILY SSF48008 77 208 6.28E-22 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS12985 4d0c83a6f834efaf8af7a57fe040f8c5 223 SMART SM00345 13 71 5.1E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS12985 4d0c83a6f834efaf8af7a57fe040f8c5 223 Pfam PF07729 FCD domain 81 200 1.7E-22 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS12985 4d0c83a6f834efaf8af7a57fe040f8c5 223 SUPERFAMILY SSF46785 4 75 5.82E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12985 4d0c83a6f834efaf8af7a57fe040f8c5 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 4.8E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS12985 4d0c83a6f834efaf8af7a57fe040f8c5 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 4.8E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS17590 d25e4c6b388de759a626af6228df14d1 360 SUPERFAMILY SSF117916 4 83 2.13E-14 T 09-03-2017 NA29_RS17590 d25e4c6b388de759a626af6228df14d1 360 Pfam PF01883 Domain of unknown function DUF59 4 76 1.9E-16 T 09-03-2017 IPR002744 Domain of unknown function DUF59 NA29_RS17590 d25e4c6b388de759a626af6228df14d1 360 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 5.7E-100 T 09-03-2017 IPR019591 Mrp/NBP35 ATP-binding protein NA29_RS17590 d25e4c6b388de759a626af6228df14d1 360 Gene3D G3DSA:3.40.50.300 91 337 2.0E-103 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17590 d25e4c6b388de759a626af6228df14d1 360 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 09-03-2017 IPR000808 Mrp, conserved site GO:0005524 NA29_RS17590 d25e4c6b388de759a626af6228df14d1 360 Hamap MF_02040 Iron-sulfur cluster carrier protein. 90 338 37.127 T 09-03-2017 IPR019591 Mrp/NBP35 ATP-binding protein NA29_RS17590 d25e4c6b388de759a626af6228df14d1 360 SUPERFAMILY SSF52540 85 321 1.14E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13190 527b55255b0b1aa0e11c94995e0db1ed 263 Gene3D G3DSA:2.160.10.10 3 190 7.8E-49 T 09-03-2017 NA29_RS13190 527b55255b0b1aa0e11c94995e0db1ed 263 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 262 4.2E-102 T 09-03-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 NA29_RS13190 527b55255b0b1aa0e11c94995e0db1ed 263 PIRSF PIRSF000456 1 263 2.1E-102 T 09-03-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 NA29_RS13190 527b55255b0b1aa0e11c94995e0db1ed 263 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 149 177 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 NA29_RS13190 527b55255b0b1aa0e11c94995e0db1ed 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 138 1.0E-7 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS13190 527b55255b0b1aa0e11c94995e0db1ed 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 35 1.8E-6 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS13190 527b55255b0b1aa0e11c94995e0db1ed 263 SUPERFAMILY SSF51161 2 262 4.99E-76 T 09-03-2017 IPR011004 Trimeric LpxA-like NA29_RS13190 527b55255b0b1aa0e11c94995e0db1ed 263 Gene3D G3DSA:1.20.1180.10 193 263 6.6E-24 T 09-03-2017 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 NA29_RS13190 527b55255b0b1aa0e11c94995e0db1ed 263 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 262 5.6E-26 T 09-03-2017 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 NA29_RS13190 527b55255b0b1aa0e11c94995e0db1ed 263 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 263 46.086 T 09-03-2017 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 NA29_RS23640 c42099d649c4edc9a8f97717de840937 111 Pfam PF05957 Bacterial protein of unknown function (DUF883) 22 110 1.4E-20 T 09-03-2017 IPR010279 Protein of unknown function DUF883, ElaB NA29_RS17825 02daf0f7807933ddf92c770263738f4c 441 PRINTS PR00447 Natural resistance-associated macrophage protein signature 162 183 4.5E-50 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 NA29_RS17825 02daf0f7807933ddf92c770263738f4c 441 PRINTS PR00447 Natural resistance-associated macrophage protein signature 109 135 4.5E-50 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 NA29_RS17825 02daf0f7807933ddf92c770263738f4c 441 PRINTS PR00447 Natural resistance-associated macrophage protein signature 381 400 4.5E-50 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 NA29_RS17825 02daf0f7807933ddf92c770263738f4c 441 PRINTS PR00447 Natural resistance-associated macrophage protein signature 214 237 4.5E-50 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 NA29_RS17825 02daf0f7807933ddf92c770263738f4c 441 PRINTS PR00447 Natural resistance-associated macrophage protein signature 349 366 4.5E-50 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 NA29_RS17825 02daf0f7807933ddf92c770263738f4c 441 PRINTS PR00447 Natural resistance-associated macrophage protein signature 321 340 4.5E-50 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 NA29_RS17825 02daf0f7807933ddf92c770263738f4c 441 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 30 405 2.9E-99 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 NA29_RS17825 02daf0f7807933ddf92c770263738f4c 441 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 17 437 34.406 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 NA29_RS17825 02daf0f7807933ddf92c770263738f4c 441 Pfam PF01566 Natural resistance-associated macrophage protein 50 411 3.3E-123 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 NA29_RS15535 77a1fe503dd1f61bf5f4f88e28e3c9ca 165 Gene3D G3DSA:3.40.630.30 7 159 2.2E-46 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS15535 77a1fe503dd1f61bf5f4f88e28e3c9ca 165 Pfam PF13673 Acetyltransferase (GNAT) domain 83 159 9.2E-13 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS15535 77a1fe503dd1f61bf5f4f88e28e3c9ca 165 SUPERFAMILY SSF55729 6 161 3.01E-32 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS01070 66ad3a0c6ff7e42a7880bfa5c736a7ee 222 Pfam PF04340 Protein of unknown function, DUF484 2 211 1.1E-30 T 09-03-2017 IPR007435 Protein of unknown function DUF484 NA29_RS17700 7c2eca870deda4db647eafb4f0187a49 221 PIRSF PIRSF015617 24 221 3.8E-66 T 09-03-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 NA29_RS17700 7c2eca870deda4db647eafb4f0187a49 221 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 52 220 3.3E-55 T 09-03-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 NA29_RS17700 7c2eca870deda4db647eafb4f0187a49 221 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 22 44 2.0E-7 T 09-03-2017 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 NA29_RS17700 7c2eca870deda4db647eafb4f0187a49 221 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 47 220 4.0E-67 T 09-03-2017 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 NA29_RS17700 7c2eca870deda4db647eafb4f0187a49 221 SUPERFAMILY SSF52540 31 220 4.46E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17700 7c2eca870deda4db647eafb4f0187a49 221 Gene3D G3DSA:3.40.50.300 26 221 3.5E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23565 a7c45864ee5725ebaa8ba967db845167 281 Gene3D G3DSA:3.20.20.70 19 278 1.2E-48 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS23565 a7c45864ee5725ebaa8ba967db845167 281 Hamap MF_00443 Thiazole synthase [thiG]. 18 275 41.053 T 09-03-2017 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 NA29_RS23565 a7c45864ee5725ebaa8ba967db845167 281 Pfam PF05690 Thiazole biosynthesis protein ThiG 21 269 4.7E-104 T 09-03-2017 NA29_RS23565 a7c45864ee5725ebaa8ba967db845167 281 SUPERFAMILY SSF110399 17 260 4.32E-78 T 09-03-2017 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 NA29_RS15055 92c6306f65ce46ff4bf977a57347c80a 166 Gene3D G3DSA:3.40.30.10 76 161 3.0E-8 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS15055 92c6306f65ce46ff4bf977a57347c80a 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 11 156 1.3E-49 T 09-03-2017 NA29_RS15055 92c6306f65ce46ff4bf977a57347c80a 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 9 156 2.6E-59 T 09-03-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15055 92c6306f65ce46ff4bf977a57347c80a 166 PIRSF PIRSF000216 1 166 1.7E-58 T 09-03-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15055 92c6306f65ce46ff4bf977a57347c80a 166 SUPERFAMILY SSF52833 2 158 5.93E-51 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS15055 92c6306f65ce46ff4bf977a57347c80a 166 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 113 131 - T 09-03-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS07180 68cc5fc57ca484b859569ed9e9f89be1 780 SUPERFAMILY SSF51395 405 766 3.66E-120 T 09-03-2017 NA29_RS07180 68cc5fc57ca484b859569ed9e9f89be1 780 Gene3D G3DSA:3.20.20.70 405 766 4.3E-126 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS07180 68cc5fc57ca484b859569ed9e9f89be1 780 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 131 146 4.7E-8 T 09-03-2017 NA29_RS07180 68cc5fc57ca484b859569ed9e9f89be1 780 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 4.7E-8 T 09-03-2017 NA29_RS07180 68cc5fc57ca484b859569ed9e9f89be1 780 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 306 4.7E-8 T 09-03-2017 NA29_RS07180 68cc5fc57ca484b859569ed9e9f89be1 780 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 275 290 4.7E-8 T 09-03-2017 NA29_RS07180 68cc5fc57ca484b859569ed9e9f89be1 780 Gene3D G3DSA:3.50.50.60 263 391 6.0E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07180 68cc5fc57ca484b859569ed9e9f89be1 780 Gene3D G3DSA:3.50.50.60 1 42 6.0E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07180 68cc5fc57ca484b859569ed9e9f89be1 780 Gene3D G3DSA:3.50.50.60 96 168 6.0E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07180 68cc5fc57ca484b859569ed9e9f89be1 780 SUPERFAMILY SSF51905 1 152 2.27E-38 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07180 68cc5fc57ca484b859569ed9e9f89be1 780 SUPERFAMILY SSF51905 254 360 2.27E-38 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07180 68cc5fc57ca484b859569ed9e9f89be1 780 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 410 739 2.5E-66 T 09-03-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 NA29_RS03655 d11908c5acd15339e9b561218ab84820 190 SUPERFAMILY SSF81342 15 190 7.61E-31 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 NA29_RS03655 d11908c5acd15339e9b561218ab84820 190 Pfam PF01292 Prokaryotic cytochrome b561 19 190 1.0E-28 T 09-03-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 NA29_RS03655 d11908c5acd15339e9b561218ab84820 190 Gene3D G3DSA:1.20.950.20 17 177 9.5E-6 T 09-03-2017 NA29_RS24025 3579f0b98e3f6e755f9125c8b8440169 125 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 59 125 1.7E-30 T 09-03-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS24025 3579f0b98e3f6e755f9125c8b8440169 125 SUPERFAMILY SSF48300 4 61 3.01E-16 T 09-03-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS24025 3579f0b98e3f6e755f9125c8b8440169 125 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 52 2.8E-18 T 09-03-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS24025 3579f0b98e3f6e755f9125c8b8440169 125 Gene3D G3DSA:3.30.1390.10 53 125 1.2E-33 T 09-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NA29_RS24025 3579f0b98e3f6e755f9125c8b8440169 125 SUPERFAMILY SSF54736 54 125 5.76E-25 T 09-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NA29_RS24025 3579f0b98e3f6e755f9125c8b8440169 125 Gene3D G3DSA:1.20.5.710 2 52 3.1E-23 T 09-03-2017 NA29_RS24025 3579f0b98e3f6e755f9125c8b8440169 125 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 125 25.845 T 09-03-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS24025 3579f0b98e3f6e755f9125c8b8440169 125 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 125 3.9E-50 T 09-03-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS24025 3579f0b98e3f6e755f9125c8b8440169 125 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 61 96 2.0E-12 T 09-03-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS20425 d84d017298c893b601f4c4b5485ed899 473 Gene3D G3DSA:3.30.465.10 108 226 4.4E-47 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS20425 d84d017298c893b601f4c4b5485ed899 473 Pfam PF01565 FAD binding domain 52 189 3.1E-39 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NA29_RS20425 d84d017298c893b601f4c4b5485ed899 473 SUPERFAMILY SSF55103 229 467 1.8E-73 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NA29_RS20425 d84d017298c893b601f4c4b5485ed899 473 Gene3D G3DSA:1.10.45.10 427 466 1.0E-13 T 09-03-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 NA29_RS20425 d84d017298c893b601f4c4b5485ed899 473 SUPERFAMILY SSF56176 12 226 6.07E-72 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS20425 d84d017298c893b601f4c4b5485ed899 473 Pfam PF02913 FAD linked oxidases, C-terminal domain 226 466 2.5E-66 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 NA29_RS20425 d84d017298c893b601f4c4b5485ed899 473 Gene3D G3DSA:3.30.43.10 4 107 4.8E-31 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NA29_RS01925 49887d0632d25857ff4b63c104e2dff7 311 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 236 245 - T 09-03-2017 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111 NA29_RS01925 49887d0632d25857ff4b63c104e2dff7 311 Gene3D G3DSA:3.20.20.70 8 294 1.2E-88 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS01925 49887d0632d25857ff4b63c104e2dff7 311 SUPERFAMILY SSF51569 5 294 2.34E-72 T 09-03-2017 NA29_RS01925 49887d0632d25857ff4b63c104e2dff7 311 Pfam PF00682 HMGL-like 9 283 2.3E-54 T 09-03-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 NA29_RS03025 ba7510c1eeb4378e11a1b878a1ff00ce 78 SUPERFAMILY SSF47413 13 77 2.59E-14 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS03025 ba7510c1eeb4378e11a1b878a1ff00ce 78 Pfam PF01381 Helix-turn-helix 21 75 6.7E-13 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS03025 ba7510c1eeb4378e11a1b878a1ff00ce 78 Gene3D G3DSA:1.10.260.40 13 77 9.0E-18 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS03025 ba7510c1eeb4378e11a1b878a1ff00ce 78 SMART SM00530 20 75 8.6E-11 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS22245 279429c60b39f76223d1df6243342ef9 166 Gene3D G3DSA:3.40.30.10 3 165 3.4E-47 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS22245 279429c60b39f76223d1df6243342ef9 166 Pfam PF08534 Redoxin 19 162 6.4E-29 T 09-03-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 NA29_RS22245 279429c60b39f76223d1df6243342ef9 166 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 166 38.004 T 09-03-2017 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 NA29_RS22245 279429c60b39f76223d1df6243342ef9 166 SUPERFAMILY SSF52833 1 163 1.25E-44 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS22245 279429c60b39f76223d1df6243342ef9 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 09-03-2017 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 NA29_RS02480 bbdadcfab698467907243836d4bc4fcf 323 SUPERFAMILY SSF53686 6 293 7.46E-66 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS02480 bbdadcfab698467907243836d4bc4fcf 323 Gene3D G3DSA:3.40.50.1100 17 119 4.1E-24 T 09-03-2017 NA29_RS02480 bbdadcfab698467907243836d4bc4fcf 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 275 7.0E-51 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS02480 bbdadcfab698467907243836d4bc4fcf 323 TIGRFAM TIGR03945 PLP_SbnA_fam: 2,3-diaminopropionate biosynthesis protein SbnA 7 290 1.9E-113 T 09-03-2017 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA NA29_RS02480 bbdadcfab698467907243836d4bc4fcf 323 Gene3D G3DSA:3.40.50.1100 120 289 2.9E-41 T 09-03-2017 NA29_RS02750 2c2c0d99482f888d55ba44a7ceb49a4c 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 251 3.0E-7 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS02750 2c2c0d99482f888d55ba44a7ceb49a4c 256 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 14 256 5.2E-118 T 09-03-2017 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 NA29_RS02750 2c2c0d99482f888d55ba44a7ceb49a4c 256 SUPERFAMILY SSF52540 14 252 1.36E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02750 2c2c0d99482f888d55ba44a7ceb49a4c 256 SMART SM00382 38 237 6.7E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS02750 2c2c0d99482f888d55ba44a7ceb49a4c 256 Gene3D G3DSA:3.40.50.300 12 249 3.1E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02750 2c2c0d99482f888d55ba44a7ceb49a4c 256 Pfam PF00005 ABC transporter 29 181 1.5E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS02750 2c2c0d99482f888d55ba44a7ceb49a4c 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS15005 f937db85c1d8ef03bfcdd91d303a46fe 103 PIRSF PIRSF019883 1 100 4.0E-43 T 09-03-2017 IPR016768 Uncharacterised conserved protein UCP019883, membrane NA29_RS15005 f937db85c1d8ef03bfcdd91d303a46fe 103 Pfam PF10993 Protein of unknown function (DUF2818) 6 96 7.8E-38 T 09-03-2017 IPR016768 Uncharacterised conserved protein UCP019883, membrane NA29_RS15185 c4a6f29affd1a860483b129fe56efa29 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 5.7E-9 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS15185 c4a6f29affd1a860483b129fe56efa29 174 SUPERFAMILY SSF51161 1 170 1.22E-45 T 09-03-2017 IPR011004 Trimeric LpxA-like NA29_RS15185 c4a6f29affd1a860483b129fe56efa29 174 Gene3D G3DSA:2.160.10.10 2 167 1.2E-43 T 09-03-2017 NA29_RS18135 fc3dc1081bb8665479095e5539e60182 281 Gene3D G3DSA:1.10.10.60 164 221 2.0E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS18135 fc3dc1081bb8665479095e5539e60182 281 SUPERFAMILY SSF46689 221 269 3.19E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS18135 fc3dc1081bb8665479095e5539e60182 281 Gene3D G3DSA:1.10.10.60 222 267 3.6E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS18135 fc3dc1081bb8665479095e5539e60182 281 SMART SM00342 184 266 2.1E-24 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS18135 fc3dc1081bb8665479095e5539e60182 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 262 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS18135 fc3dc1081bb8665479095e5539e60182 281 Pfam PF12833 Helix-turn-helix domain 190 267 2.0E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS18135 fc3dc1081bb8665479095e5539e60182 281 Gene3D G3DSA:2.60.120.10 42 101 5.5E-4 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS18135 fc3dc1081bb8665479095e5539e60182 281 SUPERFAMILY SSF51182 38 200 2.76E-7 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS20535 bc000d624f9ed8a0084740e859864932 502 Pfam PF00916 Sulfate permease family 16 366 5.2E-50 T 09-03-2017 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 NA29_RS20535 bc000d624f9ed8a0084740e859864932 502 Gene3D G3DSA:3.30.750.24 419 498 1.3E-10 T 09-03-2017 IPR002645 STAS domain NA29_RS20535 bc000d624f9ed8a0084740e859864932 502 Pfam PF13466 STAS domain 422 497 5.6E-8 T 09-03-2017 IPR002645 STAS domain NA29_RS20535 bc000d624f9ed8a0084740e859864932 502 SUPERFAMILY SSF52091 418 497 2.35E-12 T 09-03-2017 IPR002645 STAS domain NA29_RS08640 176b9d3cf98419d47893fcfa32ba07c9 223 Gene3D G3DSA:2.60.120.10 7 141 2.4E-23 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS08640 176b9d3cf98419d47893fcfa32ba07c9 223 SMART SM00100 12 133 1.7E-8 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain NA29_RS08640 176b9d3cf98419d47893fcfa32ba07c9 223 SUPERFAMILY SSF46785 148 221 1.27E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08640 176b9d3cf98419d47893fcfa32ba07c9 223 Gene3D G3DSA:1.10.10.10 147 221 5.7E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08640 176b9d3cf98419d47893fcfa32ba07c9 223 Pfam PF13545 Crp-like helix-turn-helix domain 150 221 2.9E-11 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 NA29_RS08640 176b9d3cf98419d47893fcfa32ba07c9 223 Pfam PF00027 Cyclic nucleotide-binding domain 31 117 9.8E-15 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain NA29_RS08640 176b9d3cf98419d47893fcfa32ba07c9 223 SUPERFAMILY SSF51206 6 138 5.5E-26 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like NA29_RS24605 6c5f992316d71e8ac9687cc7749bfad6 369 SUPERFAMILY SSF51726 18 365 9.94E-117 T 09-03-2017 NA29_RS24605 6c5f992316d71e8ac9687cc7749bfad6 369 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 19 361 5.6E-134 T 09-03-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS24605 6c5f992316d71e8ac9687cc7749bfad6 369 Gene3D G3DSA:3.20.20.210 16 366 6.0E-148 T 09-03-2017 NA29_RS24605 6c5f992316d71e8ac9687cc7749bfad6 369 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 36 45 - T 09-03-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS24605 6c5f992316d71e8ac9687cc7749bfad6 369 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 155 171 - T 09-03-2017 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS24605 6c5f992316d71e8ac9687cc7749bfad6 369 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 20 362 47.995 T 09-03-2017 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS24605 6c5f992316d71e8ac9687cc7749bfad6 369 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 23 360 2.3E-123 T 09-03-2017 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS06680 22b55c824094da1c9b25c947991c1376 275 Pfam PF00149 Calcineurin-like phosphoesterase 3 200 1.0E-20 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NA29_RS06680 22b55c824094da1c9b25c947991c1376 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 257 38.191 T 09-03-2017 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 NA29_RS06680 22b55c824094da1c9b25c947991c1376 275 SUPERFAMILY SSF56300 1 250 5.01E-57 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS06680 22b55c824094da1c9b25c947991c1376 275 Gene3D G3DSA:3.60.21.10 3 250 2.0E-41 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS17565 09887a4198d1dbb3bf7f4dd8f27048fa 193 SMART SM00830 15 95 2.1E-10 T 09-03-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 NA29_RS17565 09887a4198d1dbb3bf7f4dd8f27048fa 193 SUPERFAMILY SSF48600 18 176 1.17E-29 T 09-03-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 NA29_RS17565 09887a4198d1dbb3bf7f4dd8f27048fa 193 Gene3D G3DSA:1.20.59.10 24 100 6.0E-9 T 09-03-2017 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 NA29_RS17565 09887a4198d1dbb3bf7f4dd8f27048fa 193 Pfam PF01817 Chorismate mutase type II 23 92 2.1E-6 T 09-03-2017 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 NA29_RS17565 09887a4198d1dbb3bf7f4dd8f27048fa 193 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 22 130 7.3E-27 T 09-03-2017 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 NA29_RS17180 657847e54273b32a92ad5a46af774b5d 197 Gene3D G3DSA:1.10.357.10 10 191 3.1E-35 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS17180 657847e54273b32a92ad5a46af774b5d 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 56 2.4E-11 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS17180 657847e54273b32a92ad5a46af774b5d 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.2E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS17180 657847e54273b32a92ad5a46af774b5d 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.2E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS17180 657847e54273b32a92ad5a46af774b5d 197 SUPERFAMILY SSF46689 8 71 2.15E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS17180 657847e54273b32a92ad5a46af774b5d 197 SUPERFAMILY SSF48498 79 191 1.15E-27 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS08925 30a40709ad94e330cf26f6ec6aefb0cc 826 Pfam PF00582 Universal stress protein family 690 824 1.3E-15 T 09-03-2017 IPR006016 UspA GO:0006950 NA29_RS08925 30a40709ad94e330cf26f6ec6aefb0cc 826 Pfam PF00999 Sodium/hydrogen exchanger family 14 408 1.5E-57 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 NA29_RS08925 30a40709ad94e330cf26f6ec6aefb0cc 826 SUPERFAMILY SSF52402 690 823 5.19E-17 T 09-03-2017 NA29_RS08925 30a40709ad94e330cf26f6ec6aefb0cc 826 Gene3D G3DSA:3.40.50.620 684 823 1.0E-17 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS23725 2165974ad0a11802cf510b33f37b34cb 640 SUPERFAMILY SSF74863 29 145 4.32E-35 T 09-03-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain NA29_RS23725 2165974ad0a11802cf510b33f37b34cb 640 Gene3D G3DSA:3.40.30.10 536 635 5.9E-33 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS23725 2165974ad0a11802cf510b33f37b34cb 640 Gene3D G3DSA:2.60.40.1250 28 148 4.2E-38 T 09-03-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain NA29_RS23725 2165974ad0a11802cf510b33f37b34cb 640 Pfam PF11412 Disulphide bond corrector protein DsbC 31 142 2.0E-31 T 09-03-2017 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain NA29_RS23725 2165974ad0a11802cf510b33f37b34cb 640 Pfam PF13899 Thioredoxin-like 531 608 4.7E-12 T 09-03-2017 NA29_RS23725 2165974ad0a11802cf510b33f37b34cb 640 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 226 397 2.3E-18 T 09-03-2017 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 NA29_RS23725 2165974ad0a11802cf510b33f37b34cb 640 SUPERFAMILY SSF52833 526 634 1.52E-22 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS23725 2165974ad0a11802cf510b33f37b34cb 640 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 5 636 34.179 T 09-03-2017 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 NA29_RS18235 e0d5f71d5531877bd8eea9f1be3c88d7 292 Gene3D G3DSA:1.10.10.10 20 94 1.1E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18235 e0d5f71d5531877bd8eea9f1be3c88d7 292 SMART SM00346 25 115 9.0E-26 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS18235 e0d5f71d5531877bd8eea9f1be3c88d7 292 Pfam PF01614 Bacterial transcriptional regulator 146 270 3.9E-23 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS18235 e0d5f71d5531877bd8eea9f1be3c88d7 292 Gene3D G3DSA:3.30.450.40 95 276 1.2E-46 T 09-03-2017 IPR029016 GAF domain-like NA29_RS18235 e0d5f71d5531877bd8eea9f1be3c88d7 292 SUPERFAMILY SSF46785 25 99 1.67E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18235 e0d5f71d5531877bd8eea9f1be3c88d7 292 Pfam PF09339 IclR helix-turn-helix domain 28 76 4.7E-14 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS18235 e0d5f71d5531877bd8eea9f1be3c88d7 292 SUPERFAMILY SSF55781 91 275 1.57E-40 T 09-03-2017 IPR029016 GAF domain-like NA29_RS11155 b8c51960b94f7149e2573fefdd7dbdf5 420 Gene3D G3DSA:1.20.1250.20 236 415 1.3E-19 T 09-03-2017 NA29_RS11155 b8c51960b94f7149e2573fefdd7dbdf5 420 Gene3D G3DSA:1.20.1250.20 26 206 2.0E-37 T 09-03-2017 NA29_RS11155 b8c51960b94f7149e2573fefdd7dbdf5 420 SUPERFAMILY SSF103473 20 416 7.32E-74 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS11155 b8c51960b94f7149e2573fefdd7dbdf5 420 ProSitePatterns PS00217 Sugar transport proteins signature 2. 125 150 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS11155 b8c51960b94f7149e2573fefdd7dbdf5 420 Pfam PF07690 Major Facilitator Superfamily 277 415 5.4E-11 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS11155 b8c51960b94f7149e2573fefdd7dbdf5 420 Pfam PF07690 Major Facilitator Superfamily 38 259 2.5E-37 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS05240 9491f6b9d4694c32bced0a5ce64ba5a0 340 SUPERFAMILY SSF52540 14 274 1.3E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05240 9491f6b9d4694c32bced0a5ce64ba5a0 340 Gene3D G3DSA:3.40.50.300 18 269 7.4E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05240 9491f6b9d4694c32bced0a5ce64ba5a0 340 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS05240 9491f6b9d4694c32bced0a5ce64ba5a0 340 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 247 311 5.1E-20 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS05240 9491f6b9d4694c32bced0a5ce64ba5a0 340 Pfam PF00005 ABC transporter 38 195 4.7E-26 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS05240 9491f6b9d4694c32bced0a5ce64ba5a0 340 SMART SM00382 46 253 4.4E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS05240 9491f6b9d4694c32bced0a5ce64ba5a0 340 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 245 329 1.2E-25 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS23495 19910c59dbd9d6d57335b27b82034f0c 440 SUPERFAMILY SSF53720 31 436 5.69E-86 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS23495 19910c59dbd9d6d57335b27b82034f0c 440 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 3 436 41.868 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 NA29_RS23495 19910c59dbd9d6d57335b27b82034f0c 440 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 238 270 - T 09-03-2017 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 NA29_RS23495 19910c59dbd9d6d57335b27b82034f0c 440 PRINTS PR00083 Histidinol dehydrogenase signature 145 171 2.3E-84 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 NA29_RS23495 19910c59dbd9d6d57335b27b82034f0c 440 PRINTS PR00083 Histidinol dehydrogenase signature 179 205 2.3E-84 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 NA29_RS23495 19910c59dbd9d6d57335b27b82034f0c 440 PRINTS PR00083 Histidinol dehydrogenase signature 238 259 2.3E-84 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 NA29_RS23495 19910c59dbd9d6d57335b27b82034f0c 440 PRINTS PR00083 Histidinol dehydrogenase signature 209 234 2.3E-84 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 NA29_RS23495 19910c59dbd9d6d57335b27b82034f0c 440 PRINTS PR00083 Histidinol dehydrogenase signature 260 279 2.3E-84 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 NA29_RS23495 19910c59dbd9d6d57335b27b82034f0c 440 PRINTS PR00083 Histidinol dehydrogenase signature 370 388 2.3E-84 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 NA29_RS23495 19910c59dbd9d6d57335b27b82034f0c 440 PRINTS PR00083 Histidinol dehydrogenase signature 329 354 2.3E-84 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 NA29_RS23495 19910c59dbd9d6d57335b27b82034f0c 440 PRINTS PR00083 Histidinol dehydrogenase signature 37 61 2.3E-84 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 NA29_RS23495 19910c59dbd9d6d57335b27b82034f0c 440 Pfam PF00815 Histidinol dehydrogenase 28 436 1.2E-166 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 NA29_RS23495 19910c59dbd9d6d57335b27b82034f0c 440 PIRSF PIRSF000099 3 439 1.2E-157 T 09-03-2017 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 NA29_RS23495 19910c59dbd9d6d57335b27b82034f0c 440 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 38 435 5.0E-159 T 09-03-2017 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 NA29_RS23495 19910c59dbd9d6d57335b27b82034f0c 440 Gene3D G3DSA:3.40.50.1980 32 248 5.9E-80 T 09-03-2017 NA29_RS21045 4e6fbf5a85ec748ddf49dc05f2517217 330 SUPERFAMILY SSF52283 3 136 2.34E-34 T 09-03-2017 NA29_RS21045 4e6fbf5a85ec748ddf49dc05f2517217 330 Gene3D G3DSA:3.40.50.720 3 116 5.3E-35 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS21045 4e6fbf5a85ec748ddf49dc05f2517217 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 288 2.3E-58 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NA29_RS21045 4e6fbf5a85ec748ddf49dc05f2517217 330 SUPERFAMILY SSF51735 102 289 8.86E-59 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS21045 4e6fbf5a85ec748ddf49dc05f2517217 330 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 150 177 - T 09-03-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 NA29_RS21045 4e6fbf5a85ec748ddf49dc05f2517217 330 Gene3D G3DSA:3.40.50.720 117 290 5.3E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS21045 4e6fbf5a85ec748ddf49dc05f2517217 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 310 5.5E-23 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 NA29_RS21130 d2db47f248738bf8165bc670c307dec0 379 SUPERFAMILY SSF46894 298 369 7.48E-10 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS21130 d2db47f248738bf8165bc670c307dec0 379 SMART SM00421 310 367 1.8E-4 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS21130 d2db47f248738bf8165bc670c307dec0 379 Gene3D G3DSA:3.30.450.20 178 276 9.9E-7 T 09-03-2017 NA29_RS21130 d2db47f248738bf8165bc670c307dec0 379 SUPERFAMILY SSF55785 178 276 4.76E-5 T 09-03-2017 IPR000014 PAS domain NA29_RS21130 d2db47f248738bf8165bc670c307dec0 379 Gene3D G3DSA:1.10.10.10 311 368 1.8E-8 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16890 cb545058b52e2f4688d249cf89c679a6 878 TIGRFAM TIGR03480 HpnN: hopanoid biosynthesis associated RND transporter like protein HpnN 6 870 5.4E-295 T 09-03-2017 IPR017841 Hopanoid biosynthesis associated RND transporter-like protein HpnN NA29_RS16890 cb545058b52e2f4688d249cf89c679a6 878 Gene3D G3DSA:1.20.1640.10 231 442 4.5E-27 T 09-03-2017 NA29_RS16890 cb545058b52e2f4688d249cf89c679a6 878 Gene3D G3DSA:1.20.1640.10 718 867 5.0E-14 T 09-03-2017 NA29_RS16890 cb545058b52e2f4688d249cf89c679a6 878 SUPERFAMILY SSF82866 667 867 1.7E-20 T 09-03-2017 NA29_RS16890 cb545058b52e2f4688d249cf89c679a6 878 Pfam PF03176 MMPL family 172 434 6.6E-20 T 09-03-2017 IPR004869 Membrane transport protein, MMPL domain GO:0016020 NA29_RS16890 cb545058b52e2f4688d249cf89c679a6 878 SUPERFAMILY SSF82866 228 437 1.83E-23 T 09-03-2017 NA29_RS21925 942d61d50b50f5b8aa353dd90f6bd5f8 291 Pfam PF03471 Transporter associated domain 208 282 3.2E-20 T 09-03-2017 IPR005170 Transporter-associated domain NA29_RS21925 942d61d50b50f5b8aa353dd90f6bd5f8 291 Pfam PF00571 CBS domain 134 188 2.8E-5 T 09-03-2017 IPR000644 CBS domain NA29_RS21925 942d61d50b50f5b8aa353dd90f6bd5f8 291 Pfam PF00571 CBS domain 66 128 1.7E-4 T 09-03-2017 IPR000644 CBS domain NA29_RS21925 942d61d50b50f5b8aa353dd90f6bd5f8 291 SUPERFAMILY SSF54631 67 200 1.77E-31 T 09-03-2017 NA29_RS21925 942d61d50b50f5b8aa353dd90f6bd5f8 291 Gene3D G3DSA:3.30.465.10 196 283 2.2E-27 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS21925 942d61d50b50f5b8aa353dd90f6bd5f8 291 Gene3D G3DSA:3.10.580.10 58 195 8.3E-19 T 09-03-2017 NA29_RS21925 942d61d50b50f5b8aa353dd90f6bd5f8 291 SUPERFAMILY SSF56176 203 285 1.06E-22 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS21925 942d61d50b50f5b8aa353dd90f6bd5f8 291 SMART SM01091 205 283 2.4E-29 T 09-03-2017 IPR005170 Transporter-associated domain NA29_RS02075 cdc56086c69e05a6f9ee8753bd2a8de0 439 SUPERFAMILY SSF103473 16 432 6.93E-66 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS02075 cdc56086c69e05a6f9ee8753bd2a8de0 439 Gene3D G3DSA:1.20.1250.20 244 430 1.1E-21 T 09-03-2017 NA29_RS02075 cdc56086c69e05a6f9ee8753bd2a8de0 439 Gene3D G3DSA:1.20.1250.20 16 219 5.2E-24 T 09-03-2017 NA29_RS02075 cdc56086c69e05a6f9ee8753bd2a8de0 439 Pfam PF07690 Major Facilitator Superfamily 30 391 1.9E-26 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS00665 a2fdbab65687b69914a52fcc041fa551 210 Pfam PF00072 Response regulator receiver domain 10 121 1.6E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS00665 a2fdbab65687b69914a52fcc041fa551 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 1.4E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS00665 a2fdbab65687b69914a52fcc041fa551 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 1.4E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS00665 a2fdbab65687b69914a52fcc041fa551 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 1.4E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS00665 a2fdbab65687b69914a52fcc041fa551 210 Gene3D G3DSA:1.10.10.10 125 210 3.4E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00665 a2fdbab65687b69914a52fcc041fa551 210 SUPERFAMILY SSF52172 6 135 4.98E-33 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS00665 a2fdbab65687b69914a52fcc041fa551 210 SMART SM00421 148 205 1.6E-22 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS00665 a2fdbab65687b69914a52fcc041fa551 210 SUPERFAMILY SSF46894 135 209 1.46E-21 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS00665 a2fdbab65687b69914a52fcc041fa551 210 Gene3D G3DSA:3.40.50.2300 5 124 8.5E-35 T 09-03-2017 NA29_RS00665 a2fdbab65687b69914a52fcc041fa551 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 205 1.2E-19 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS00665 a2fdbab65687b69914a52fcc041fa551 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS00665 a2fdbab65687b69914a52fcc041fa551 210 SMART SM00448 7 120 8.7E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS03530 6a55a684f1a70ab6fcdf64e491c9be4a 469 SUPERFAMILY SSF51905 394 459 3.33E-37 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03530 6a55a684f1a70ab6fcdf64e491c9be4a 469 SUPERFAMILY SSF51905 2 230 3.33E-37 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03530 6a55a684f1a70ab6fcdf64e491c9be4a 469 SUPERFAMILY SSF56425 263 400 2.89E-24 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS03530 6a55a684f1a70ab6fcdf64e491c9be4a 469 Pfam PF00890 FAD binding domain 3 431 8.3E-32 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS03530 6a55a684f1a70ab6fcdf64e491c9be4a 469 Gene3D G3DSA:3.90.700.10 254 392 5.3E-21 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS03530 6a55a684f1a70ab6fcdf64e491c9be4a 469 TIGRFAM TIGR02485 CobZ_N-term: precorrin 3B synthase CobZ 2 458 8.0E-208 T 09-03-2017 IPR012831 Precorrin 3B synthase CobZ NA29_RS03530 6a55a684f1a70ab6fcdf64e491c9be4a 469 Gene3D G3DSA:3.50.50.60 396 456 4.1E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03530 6a55a684f1a70ab6fcdf64e491c9be4a 469 Gene3D G3DSA:3.50.50.60 2 233 4.1E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17705 be449a64efbe1a3294248e8a787b523a 270 Gene3D G3DSA:3.40.50.300 1 242 1.5E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17705 be449a64efbe1a3294248e8a787b523a 270 SMART SM00382 26 228 4.9E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS17705 be449a64efbe1a3294248e8a787b523a 270 SUPERFAMILY SSF52540 2 242 4.63E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17705 be449a64efbe1a3294248e8a787b523a 270 Pfam PF00005 ABC transporter 20 179 1.7E-22 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS17705 be449a64efbe1a3294248e8a787b523a 270 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS23550 63edaee98d2f513771aed28ee9ce3bd5 272 SMART SM00382 34 231 4.4E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS23550 63edaee98d2f513771aed28ee9ce3bd5 272 Gene3D G3DSA:3.40.50.300 4 245 3.0E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23550 63edaee98d2f513771aed28ee9ce3bd5 272 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS23550 63edaee98d2f513771aed28ee9ce3bd5 272 Pfam PF00005 ABC transporter 25 173 7.4E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS23550 63edaee98d2f513771aed28ee9ce3bd5 272 SUPERFAMILY SSF52540 9 238 4.09E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01745 d999ac79d1dbab3fd8175988aba74afd 573 TIGRFAM TIGR03397 acid_phos_Burk: acid phosphatase, Burkholderia-type 81 572 2.6E-244 T 09-03-2017 IPR017768 Acid phosphatase, AcpA NA29_RS01745 d999ac79d1dbab3fd8175988aba74afd 573 SUPERFAMILY SSF53649 209 268 2.83E-26 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NA29_RS01745 d999ac79d1dbab3fd8175988aba74afd 573 SUPERFAMILY SSF53649 339 543 2.83E-26 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NA29_RS01745 d999ac79d1dbab3fd8175988aba74afd 573 Pfam PF04185 Phosphoesterase family 81 543 6.8E-108 T 09-03-2017 IPR007312 Phosphoesterase GO:0016788 NA29_RS01745 d999ac79d1dbab3fd8175988aba74afd 573 Gene3D G3DSA:3.40.720.10 359 543 1.2E-6 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NA29_RS16210 b81e1451bd3e46ccf4794d82e585780a 662 Gene3D G3DSA:2.170.130.10 7 129 1.3E-32 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS16210 b81e1451bd3e46ccf4794d82e585780a 662 Gene3D G3DSA:2.40.170.20 140 662 4.4E-122 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS16210 b81e1451bd3e46ccf4794d82e585780a 662 SUPERFAMILY SSF56935 19 662 4.71E-112 T 09-03-2017 NA29_RS16210 b81e1451bd3e46ccf4794d82e585780a 662 Pfam PF00593 TonB dependent receptor 429 660 2.0E-26 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS16210 b81e1451bd3e46ccf4794d82e585780a 662 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 26 661 3.7E-93 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NA29_RS16210 b81e1451bd3e46ccf4794d82e585780a 662 Pfam PF07715 TonB-dependent Receptor Plug Domain 24 122 2.0E-15 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS17770 6787287689a00c10268d70cfac0ace40 410 Pfam PF13406 Transglycosylase SLT domain 94 402 3.5E-89 T 09-03-2017 IPR031304 Transglycosylase SLT domain 2 NA29_RS17770 6787287689a00c10268d70cfac0ace40 410 SUPERFAMILY SSF53955 89 406 3.19E-79 T 09-03-2017 IPR023346 Lysozyme-like domain NA29_RS17770 6787287689a00c10268d70cfac0ace40 410 Gene3D G3DSA:1.10.530.10 283 407 1.1E-51 T 09-03-2017 NA29_RS17770 6787287689a00c10268d70cfac0ace40 410 Gene3D G3DSA:1.10.530.10 140 195 1.1E-51 T 09-03-2017 NA29_RS17770 6787287689a00c10268d70cfac0ace40 410 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 99 404 8.1E-109 T 09-03-2017 IPR011757 Lytic transglycosylase MltB NA29_RS08455 a27791af64fddee43530476f422a58f4 399 SUPERFAMILY SSF48264 9 398 9.17E-86 T 09-03-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 NA29_RS08455 a27791af64fddee43530476f422a58f4 399 Gene3D G3DSA:1.10.630.10 5 396 1.4E-106 T 09-03-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 NA29_RS08455 a27791af64fddee43530476f422a58f4 399 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 342 351 - T 09-03-2017 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 NA29_RS08455 a27791af64fddee43530476f422a58f4 399 Pfam PF00067 Cytochrome P450 198 370 8.4E-29 T 09-03-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 NA29_RS08455 a27791af64fddee43530476f422a58f4 399 PRINTS PR00359 B-class P450 signature 349 360 3.5E-42 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08455 a27791af64fddee43530476f422a58f4 399 PRINTS PR00359 B-class P450 signature 148 163 3.5E-42 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08455 a27791af64fddee43530476f422a58f4 399 PRINTS PR00359 B-class P450 signature 192 214 3.5E-42 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08455 a27791af64fddee43530476f422a58f4 399 PRINTS PR00359 B-class P450 signature 340 349 3.5E-42 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08455 a27791af64fddee43530476f422a58f4 399 PRINTS PR00359 B-class P450 signature 85 96 3.5E-42 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08455 a27791af64fddee43530476f422a58f4 399 PRINTS PR00359 B-class P450 signature 290 317 3.5E-42 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08455 a27791af64fddee43530476f422a58f4 399 PRINTS PR00359 B-class P450 signature 131 147 3.5E-42 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08455 a27791af64fddee43530476f422a58f4 399 PRINTS PR00359 B-class P450 signature 318 333 3.5E-42 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08455 a27791af64fddee43530476f422a58f4 399 PRINTS PR00359 B-class P450 signature 273 284 3.5E-42 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08920 1f5af3f040abfe852337e1c366176e10 299 PIRSF PIRSF006232 5 287 4.1E-88 T 09-03-2017 IPR012093 Pirin NA29_RS08920 1f5af3f040abfe852337e1c366176e10 299 Pfam PF02678 Pirin 24 127 8.4E-34 T 09-03-2017 IPR003829 Pirin, N-terminal domain NA29_RS08920 1f5af3f040abfe852337e1c366176e10 299 SUPERFAMILY SSF51182 13 291 7.42E-80 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS08920 1f5af3f040abfe852337e1c366176e10 299 Pfam PF05726 Pirin C-terminal cupin domain 180 279 1.5E-25 T 09-03-2017 IPR008778 Pirin, C-terminal domain NA29_RS08920 1f5af3f040abfe852337e1c366176e10 299 Gene3D G3DSA:2.60.120.10 13 250 3.2E-69 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS15070 c722ece9770c8d07b095f5906ab88988 159 Gene3D G3DSA:3.40.50.700 21 150 2.1E-32 T 09-03-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15070 c722ece9770c8d07b095f5906ab88988 159 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.163 T 09-03-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15070 c722ece9770c8d07b095f5906ab88988 159 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 1.8E-22 T 09-03-2017 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15070 c722ece9770c8d07b095f5906ab88988 159 SUPERFAMILY SSF56770 9 153 2.62E-67 T 09-03-2017 NA29_RS15070 c722ece9770c8d07b095f5906ab88988 159 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 7.7E-78 T 09-03-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15070 c722ece9770c8d07b095f5906ab88988 159 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 09-03-2017 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS11785 fa6909caad23a4d79021116d6711aa27 401 Pfam PF00990 Diguanylate cyclase, GGDEF domain 218 373 1.2E-37 T 09-03-2017 IPR000160 GGDEF domain NA29_RS11785 fa6909caad23a4d79021116d6711aa27 401 Gene3D G3DSA:3.30.70.270 220 379 1.1E-47 T 09-03-2017 NA29_RS11785 fa6909caad23a4d79021116d6711aa27 401 SUPERFAMILY SSF55073 223 378 9.42E-43 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS11785 fa6909caad23a4d79021116d6711aa27 401 SMART SM00267 207 378 3.9E-53 T 09-03-2017 IPR000160 GGDEF domain NA29_RS11785 fa6909caad23a4d79021116d6711aa27 401 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 214 377 8.1E-42 T 09-03-2017 IPR000160 GGDEF domain NA29_RS03370 18aaefa551fefffe637840d54d62066c 323 Gene3D G3DSA:3.40.190.10 94 175 7.4E-10 T 09-03-2017 NA29_RS03370 18aaefa551fefffe637840d54d62066c 323 SUPERFAMILY SSF46785 1 80 1.36E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03370 18aaefa551fefffe637840d54d62066c 323 Pfam PF03466 LysR substrate binding domain 91 295 5.4E-28 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS03370 18aaefa551fefffe637840d54d62066c 323 SUPERFAMILY SSF53850 91 297 6.33E-31 T 09-03-2017 NA29_RS03370 18aaefa551fefffe637840d54d62066c 323 Gene3D G3DSA:3.40.190.10 182 262 3.0E-7 T 09-03-2017 NA29_RS03370 18aaefa551fefffe637840d54d62066c 323 Gene3D G3DSA:1.10.10.10 1 80 1.4E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03370 18aaefa551fefffe637840d54d62066c 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 62 8.8E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS15685 3f2007f82c528660d3d4ab4af2671d23 205 SMART SM00479 24 197 2.2E-23 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III NA29_RS15685 3f2007f82c528660d3d4ab4af2671d23 205 Pfam PF00929 Exonuclease 26 187 1.4E-33 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III NA29_RS15685 3f2007f82c528660d3d4ab4af2671d23 205 SUPERFAMILY SSF53098 22 197 2.85E-46 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS15685 3f2007f82c528660d3d4ab4af2671d23 205 Gene3D G3DSA:3.30.420.10 22 197 4.1E-70 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS15685 3f2007f82c528660d3d4ab4af2671d23 205 Hamap MF_00045 Oligoribonuclease [orn]. 20 198 42.353 T 09-03-2017 IPR022894 Oligoribonuclease GO:0016788 NA29_RS11110 815d0c7ab5a6ed977ba54573c1647750 822 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 183 822 6.2E-110 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NA29_RS11110 815d0c7ab5a6ed977ba54573c1647750 822 SUPERFAMILY SSF56935 138 822 1.68E-100 T 09-03-2017 NA29_RS11110 815d0c7ab5a6ed977ba54573c1647750 822 Pfam PF00593 TonB dependent receptor 584 820 4.4E-25 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS11110 815d0c7ab5a6ed977ba54573c1647750 822 Gene3D G3DSA:2.40.170.20 297 822 6.1E-96 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS11110 815d0c7ab5a6ed977ba54573c1647750 822 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 805 822 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site NA29_RS11110 815d0c7ab5a6ed977ba54573c1647750 822 Pfam PF07715 TonB-dependent Receptor Plug Domain 182 280 5.1E-16 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS11110 815d0c7ab5a6ed977ba54573c1647750 822 SMART SM00965 80 131 1.6E-10 T 09-03-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NA29_RS11110 815d0c7ab5a6ed977ba54573c1647750 822 Gene3D G3DSA:2.170.130.10 140 293 3.0E-29 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS19455 26740b3a733c72611ee7a393f7fb7409 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 1.1E-45 T 09-03-2017 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS19455 26740b3a733c72611ee7a393f7fb7409 156 PIRSF PIRSF004505 1 155 4.9E-48 T 09-03-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS19455 26740b3a733c72611ee7a393f7fb7409 156 Gene3D G3DSA:3.40.1280.10 1 155 3.2E-57 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NA29_RS19455 26740b3a733c72611ee7a393f7fb7409 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 5.0E-51 T 09-03-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS19455 26740b3a733c72611ee7a393f7fb7409 156 SUPERFAMILY SSF75217 1 154 1.78E-50 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases NA29_RS19455 26740b3a733c72611ee7a393f7fb7409 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.914 T 09-03-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS05995 81db4b6cf33380f3be88ee43bc348ca1 266 SMART SM00382 48 228 1.6E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS05995 81db4b6cf33380f3be88ee43bc348ca1 266 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS05995 81db4b6cf33380f3be88ee43bc348ca1 266 Pfam PF00005 ABC transporter 39 177 4.9E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS05995 81db4b6cf33380f3be88ee43bc348ca1 266 SUPERFAMILY SSF52540 20 250 4.62E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05995 81db4b6cf33380f3be88ee43bc348ca1 266 Gene3D G3DSA:3.40.50.300 12 224 1.1E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13500 fc066c65b2a068ab6c878cf4d1a9391a 123 Pfam PF00893 Small Multidrug Resistance protein 47 113 8.0E-9 T 09-03-2017 IPR000390 Small multidrug resistance protein family GO:0016021 NA29_RS13500 fc066c65b2a068ab6c878cf4d1a9391a 123 SUPERFAMILY SSF103481 48 122 1.01E-11 T 09-03-2017 NA29_RS01125 46caa022dbbd0f60ee23ff0ad938444b 180 SMART SM00448 4 115 5.2E-17 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS01125 46caa022dbbd0f60ee23ff0ad938444b 180 SUPERFAMILY SSF52172 4 164 1.15E-28 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS01125 46caa022dbbd0f60ee23ff0ad938444b 180 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 142 159 4.0E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS01125 46caa022dbbd0f60ee23ff0ad938444b 180 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 159 179 4.0E-5 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS01125 46caa022dbbd0f60ee23ff0ad938444b 180 Pfam PF02954 Bacterial regulatory protein, Fis family 136 175 4.0E-11 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS01125 46caa022dbbd0f60ee23ff0ad938444b 180 Gene3D G3DSA:1.10.10.60 126 178 1.6E-27 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS01125 46caa022dbbd0f60ee23ff0ad938444b 180 Gene3D G3DSA:3.40.50.2300 6 123 1.8E-27 T 09-03-2017 NA29_RS01125 46caa022dbbd0f60ee23ff0ad938444b 180 Pfam PF00072 Response regulator receiver domain 7 115 6.2E-20 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS19185 8a6d0a3e078c6bb9c89cdd5c115ddf02 241 SUPERFAMILY SSF54909 132 223 1.29E-13 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS19185 8a6d0a3e078c6bb9c89cdd5c115ddf02 241 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 135 218 1.3E-9 T 09-03-2017 IPR009799 EthD domain NA29_RS19185 8a6d0a3e078c6bb9c89cdd5c115ddf02 241 Gene3D G3DSA:3.30.70.900 130 234 5.9E-23 T 09-03-2017 NA29_RS21135 2f3b7247e3f23d6b61999b7609131fef 255 Gene3D G3DSA:2.40.10.220 132 248 3.0E-20 T 09-03-2017 NA29_RS21135 2f3b7247e3f23d6b61999b7609131fef 255 Gene3D G3DSA:2.30.110.10 24 131 8.6E-13 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS21135 2f3b7247e3f23d6b61999b7609131fef 255 Pfam PF07238 PilZ domain 131 243 9.3E-11 T 09-03-2017 IPR009875 PilZ domain GO:0035438 NA29_RS21135 2f3b7247e3f23d6b61999b7609131fef 255 SUPERFAMILY SSF141371 132 245 1.69E-6 T 09-03-2017 NA29_RS21135 2f3b7247e3f23d6b61999b7609131fef 255 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 18 253 30.497 T 09-03-2017 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 NA29_RS21135 2f3b7247e3f23d6b61999b7609131fef 255 Pfam PF07317 Flagellar regulator YcgR 23 129 5.2E-29 T 09-03-2017 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal NA29_RS10135 b6d3a3a47dbf06f2f354f42cc1564b59 104 SUPERFAMILY SSF103481 5 103 3.01E-18 T 09-03-2017 NA29_RS10135 b6d3a3a47dbf06f2f354f42cc1564b59 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 7.7E-26 T 09-03-2017 IPR000390 Small multidrug resistance protein family GO:0016021 NA29_RS00010 f91702fd46e469feae35c0011cdbdda4 368 Gene3D G3DSA:3.10.150.10 127 250 3.5E-36 T 09-03-2017 NA29_RS00010 f91702fd46e469feae35c0011cdbdda4 368 SMART SM00480 18 364 2.2E-118 T 09-03-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS00010 f91702fd46e469feae35c0011cdbdda4 368 SUPERFAMILY SSF55979 128 246 1.14E-25 T 09-03-2017 NA29_RS00010 f91702fd46e469feae35c0011cdbdda4 368 SUPERFAMILY SSF55979 248 368 2.38E-38 T 09-03-2017 NA29_RS00010 f91702fd46e469feae35c0011cdbdda4 368 Gene3D G3DSA:3.10.150.10 251 368 7.8E-40 T 09-03-2017 NA29_RS00010 f91702fd46e469feae35c0011cdbdda4 368 SUPERFAMILY SSF55979 6 117 1.79E-20 T 09-03-2017 NA29_RS00010 f91702fd46e469feae35c0011cdbdda4 368 PIRSF PIRSF000804 1 368 1.4E-114 T 09-03-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS00010 f91702fd46e469feae35c0011cdbdda4 368 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 245 3.3E-34 T 09-03-2017 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS00010 f91702fd46e469feae35c0011cdbdda4 368 Gene3D G3DSA:3.10.150.10 5 119 5.9E-25 T 09-03-2017 NA29_RS00010 f91702fd46e469feae35c0011cdbdda4 368 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 248 367 1.4E-35 T 09-03-2017 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS00010 f91702fd46e469feae35c0011cdbdda4 368 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 6 119 2.5E-28 T 09-03-2017 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS00010 f91702fd46e469feae35c0011cdbdda4 368 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 6 367 3.2E-99 T 09-03-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS10175 fc485b274ac77ab202dd8b08ff93c3dd 84 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 58 7.6E-27 T 09-03-2017 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system NA29_RS05010 338f7f14ea0294b61f2946cb703e9f28 200 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 36 199 4.1E-20 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS05010 338f7f14ea0294b61f2946cb703e9f28 200 SUPERFAMILY SSF88946 19 119 5.1E-19 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS05010 338f7f14ea0294b61f2946cb703e9f28 200 SUPERFAMILY SSF88659 141 200 2.4E-12 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS05010 338f7f14ea0294b61f2946cb703e9f28 200 Pfam PF04542 Sigma-70 region 2 41 108 3.8E-14 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS05010 338f7f14ea0294b61f2946cb703e9f28 200 Gene3D G3DSA:1.10.1740.10 21 126 2.5E-20 T 09-03-2017 NA29_RS05010 338f7f14ea0294b61f2946cb703e9f28 200 Pfam PF08281 Sigma-70, region 4 144 195 1.6E-10 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS05010 338f7f14ea0294b61f2946cb703e9f28 200 Gene3D G3DSA:1.10.10.10 141 200 4.5E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13760 c44fa4237a861157c7a5f75d380060ed 597 SUPERFAMILY SSF55174 216 307 1.1E-14 T 09-03-2017 NA29_RS13760 c44fa4237a861157c7a5f75d380060ed 597 Gene3D G3DSA:3.10.290.10 216 268 2.5E-14 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS13760 c44fa4237a861157c7a5f75d380060ed 597 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 281 441 1.7E-48 T 09-03-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 NA29_RS13760 c44fa4237a861157c7a5f75d380060ed 597 Pfam PF01479 S4 domain 216 259 2.1E-7 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS13760 c44fa4237a861157c7a5f75d380060ed 597 SUPERFAMILY SSF55120 275 445 9.6E-39 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS13760 c44fa4237a861157c7a5f75d380060ed 597 SMART SM00363 214 275 2.6E-7 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS13760 c44fa4237a861157c7a5f75d380060ed 597 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 315 329 - T 09-03-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 NA29_RS13760 c44fa4237a861157c7a5f75d380060ed 597 Pfam PF00849 RNA pseudouridylate synthase 277 408 1.5E-13 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS01735 b8b31f460177099d04cc25c780e70533 562 Gene3D G3DSA:3.30.9.10 358 384 6.7E-15 T 09-03-2017 NA29_RS01735 b8b31f460177099d04cc25c780e70533 562 Gene3D G3DSA:3.30.9.10 194 303 6.7E-15 T 09-03-2017 NA29_RS01735 b8b31f460177099d04cc25c780e70533 562 SUPERFAMILY SSF51905 297 408 4.46E-55 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS01735 b8b31f460177099d04cc25c780e70533 562 SUPERFAMILY SSF51905 32 202 4.46E-55 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS01735 b8b31f460177099d04cc25c780e70533 562 Gene3D G3DSA:3.50.50.60 308 348 5.4E-41 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS01735 b8b31f460177099d04cc25c780e70533 562 Gene3D G3DSA:3.50.50.60 31 193 5.4E-41 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS01735 b8b31f460177099d04cc25c780e70533 562 Pfam PF01494 FAD binding domain 31 374 3.7E-60 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 NA29_RS01735 b8b31f460177099d04cc25c780e70533 562 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 325 341 1.6E-31 T 09-03-2017 NA29_RS01735 b8b31f460177099d04cc25c780e70533 562 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 32 54 1.6E-31 T 09-03-2017 NA29_RS01735 b8b31f460177099d04cc25c780e70533 562 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 181 196 1.6E-31 T 09-03-2017 NA29_RS01735 b8b31f460177099d04cc25c780e70533 562 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 343 361 1.6E-31 T 09-03-2017 NA29_RS01735 b8b31f460177099d04cc25c780e70533 562 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 325 1.6E-31 T 09-03-2017 NA29_RS01735 b8b31f460177099d04cc25c780e70533 562 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 361 377 1.6E-31 T 09-03-2017 NA29_RS21740 3d73b640296a0c99f6234c01f45e3715 285 SUPERFAMILY SSF46785 5 112 1.09E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21740 3d73b640296a0c99f6234c01f45e3715 285 Gene3D G3DSA:3.40.190.10 190 237 1.5E-7 T 09-03-2017 NA29_RS21740 3d73b640296a0c99f6234c01f45e3715 285 Gene3D G3DSA:1.10.10.10 6 85 7.7E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21740 3d73b640296a0c99f6234c01f45e3715 285 SUPERFAMILY SSF53850 90 280 2.17E-22 T 09-03-2017 NA29_RS21740 3d73b640296a0c99f6234c01f45e3715 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.9E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21740 3d73b640296a0c99f6234c01f45e3715 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.9E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21740 3d73b640296a0c99f6234c01f45e3715 285 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.9E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21740 3d73b640296a0c99f6234c01f45e3715 285 Pfam PF03466 LysR substrate binding domain 89 269 1.9E-22 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS21740 3d73b640296a0c99f6234c01f45e3715 285 Gene3D G3DSA:3.40.190.10 86 189 1.1E-15 T 09-03-2017 NA29_RS21740 3d73b640296a0c99f6234c01f45e3715 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.6E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13460 3dea2b6b236352365b7ee6e03bf9a801 151 SUPERFAMILY SSF54690 3 148 1.31E-54 T 09-03-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS13460 3dea2b6b236352365b7ee6e03bf9a801 151 Pfam PF02391 MoaE protein 5 119 2.2E-38 T 09-03-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS13460 3dea2b6b236352365b7ee6e03bf9a801 151 Gene3D G3DSA:3.90.1170.40 3 148 3.0E-58 T 09-03-2017 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 SUPERFAMILY SSF50156 253 378 2.89E-24 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 49 493 2.5E-159 T 09-03-2017 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 Pfam PF13180 PDZ domain 295 385 3.5E-18 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 Pfam PF13180 PDZ domain 412 491 1.4E-6 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 Gene3D G3DSA:2.40.10.10 48 186 4.0E-40 T 09-03-2017 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 Pfam PF13365 Trypsin-like peptidase domain 125 256 4.1E-37 T 09-03-2017 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 PRINTS PR00834 HtrA/DegQ protease family signature 227 244 3.0E-52 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 PRINTS PR00834 HtrA/DegQ protease family signature 249 266 3.0E-52 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 PRINTS PR00834 HtrA/DegQ protease family signature 155 175 3.0E-52 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 PRINTS PR00834 HtrA/DegQ protease family signature 195 219 3.0E-52 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 PRINTS PR00834 HtrA/DegQ protease family signature 134 146 3.0E-52 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 PRINTS PR00834 HtrA/DegQ protease family signature 335 347 3.0E-52 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 SUPERFAMILY SSF50494 48 287 1.31E-69 T 09-03-2017 IPR009003 Peptidase S1, PA clan NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 Gene3D G3DSA:2.40.10.10 187 297 6.8E-47 T 09-03-2017 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 Gene3D G3DSA:2.30.42.10 412 498 5.1E-15 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 Gene3D G3DSA:2.30.42.10 298 391 6.0E-30 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 SUPERFAMILY SSF50156 411 498 1.14E-12 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 SMART SM00228 295 377 1.6E-12 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS20915 731a0ac0992abdb4a1c6c82f9175684d 503 SMART SM00228 410 488 2.9E-4 T 09-03-2017 IPR001478 PDZ domain GO:0005515 NA29_RS02710 8956f2eb114ec5d2cd318d81da5b2c4a 276 ProSitePatterns PS01242 Zinc finger FPG-type signature. 251 275 - T 09-03-2017 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 NA29_RS02710 8956f2eb114ec5d2cd318d81da5b2c4a 276 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 275 7.7E-86 T 09-03-2017 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 NA29_RS02710 8956f2eb114ec5d2cd318d81da5b2c4a 276 SUPERFAMILY SSF57716 224 276 4.04E-19 T 09-03-2017 NA29_RS02710 8956f2eb114ec5d2cd318d81da5b2c4a 276 SUPERFAMILY SSF81624 2 145 1.57E-36 T 09-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 NA29_RS02710 8956f2eb114ec5d2cd318d81da5b2c4a 276 Gene3D G3DSA:3.20.190.10 2 136 1.1E-35 T 09-03-2017 NA29_RS02710 8956f2eb114ec5d2cd318d81da5b2c4a 276 SUPERFAMILY SSF46946 137 228 7.65E-27 T 09-03-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 NA29_RS02710 8956f2eb114ec5d2cd318d81da5b2c4a 276 Gene3D G3DSA:1.10.8.50 137 276 9.3E-51 T 09-03-2017 NA29_RS02710 8956f2eb114ec5d2cd318d81da5b2c4a 276 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 117 3.7E-31 T 09-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 NA29_RS02710 8956f2eb114ec5d2cd318d81da5b2c4a 276 Pfam PF06827 Zinc finger found in FPG and IleRS 248 276 2.8E-12 T 09-03-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 NA29_RS02710 8956f2eb114ec5d2cd318d81da5b2c4a 276 SMART SM00898 2 118 1.4E-47 T 09-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 NA29_RS02710 8956f2eb114ec5d2cd318d81da5b2c4a 276 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 136 225 2.4E-21 T 09-03-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 NA29_RS02710 8956f2eb114ec5d2cd318d81da5b2c4a 276 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 276 42.998 T 09-03-2017 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 NA29_RS02710 8956f2eb114ec5d2cd318d81da5b2c4a 276 SMART SM01232 136 228 1.2E-44 T 09-03-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 NA29_RS05680 1f425923acde326075da9db344b38242 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 219 1.6E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS05680 1f425923acde326075da9db344b38242 232 Gene3D G3DSA:1.10.3720.10 13 226 6.2E-42 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS05680 1f425923acde326075da9db344b38242 232 SUPERFAMILY SSF161098 5 222 5.89E-47 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS05680 1f425923acde326075da9db344b38242 232 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 13 219 7.6E-65 T 09-03-2017 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 NA29_RS20685 6c481aec80e690b4f3f3a19f1638bdd6 158 Pfam PF09655 Conserved nitrate reductase-associated protein (Nitr_red_assoc) 9 149 1.1E-36 T 09-03-2017 IPR013481 Conserved hypothetical protein CHP02664, nitrate reductase-associated NA29_RS17400 34af93b667554f57c92ad341e6d08ab2 232 Gene3D G3DSA:1.10.10.60 12 68 3.6E-22 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS17400 34af93b667554f57c92ad341e6d08ab2 232 SUPERFAMILY SSF46689 17 82 1.75E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS17400 34af93b667554f57c92ad341e6d08ab2 232 SUPERFAMILY SSF48498 97 198 4.11E-23 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS17400 34af93b667554f57c92ad341e6d08ab2 232 Gene3D G3DSA:1.10.357.10 69 198 2.9E-31 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS17400 34af93b667554f57c92ad341e6d08ab2 232 Pfam PF16859 Bacterial transcriptional repressor C-terminal 100 193 1.9E-24 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS17400 34af93b667554f57c92ad341e6d08ab2 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 6.0E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS17400 34af93b667554f57c92ad341e6d08ab2 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 6.0E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS17400 34af93b667554f57c92ad341e6d08ab2 232 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 67 9.3E-14 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS03540 a15ba67785cc91dd7b3659d568ba6583 266 SUPERFAMILY SSF46785 8 77 2.91E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03540 a15ba67785cc91dd7b3659d568ba6583 266 Gene3D G3DSA:3.30.450.40 82 258 1.2E-24 T 09-03-2017 IPR029016 GAF domain-like NA29_RS03540 a15ba67785cc91dd7b3659d568ba6583 266 Pfam PF09339 IclR helix-turn-helix domain 10 59 1.6E-11 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS03540 a15ba67785cc91dd7b3659d568ba6583 266 SMART SM00346 7 98 1.7E-18 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS03540 a15ba67785cc91dd7b3659d568ba6583 266 Pfam PF01614 Bacterial transcriptional regulator 131 255 3.7E-8 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS03540 a15ba67785cc91dd7b3659d568ba6583 266 Gene3D G3DSA:1.10.10.10 6 76 1.7E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03540 a15ba67785cc91dd7b3659d568ba6583 266 SUPERFAMILY SSF55781 80 258 6.54E-26 T 09-03-2017 IPR029016 GAF domain-like NA29_RS13365 ce33fa916f049b8246a3ca0102c3e31d 369 Gene3D G3DSA:3.40.470.10 176 359 2.3E-70 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 NA29_RS13365 ce33fa916f049b8246a3ca0102c3e31d 369 SUPERFAMILY SSF52141 176 355 7.52E-61 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 NA29_RS13365 ce33fa916f049b8246a3ca0102c3e31d 369 Pfam PF03167 Uracil DNA glycosylase superfamily 201 347 9.4E-44 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 NA29_RS13365 ce33fa916f049b8246a3ca0102c3e31d 369 SMART SM00986 201 348 6.4E-41 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 NA29_RS13365 ce33fa916f049b8246a3ca0102c3e31d 369 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 187 347 9.3E-62 T 09-03-2017 IPR005273 Uracil-DNA glycosylase, family 4 domain NA29_RS13365 ce33fa916f049b8246a3ca0102c3e31d 369 SMART SM00987 201 348 6.4E-41 T 09-03-2017 NA29_RS02975 36da0f152bcb1216edcfc83837986649 608 Pfam PF02690 Na+/Pi-cotransporter 13 147 1.0E-33 T 09-03-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 NA29_RS02975 36da0f152bcb1216edcfc83837986649 608 Pfam PF02690 Na+/Pi-cotransporter 159 255 2.0E-10 T 09-03-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 NA29_RS02975 36da0f152bcb1216edcfc83837986649 608 Gene3D G3DSA:1.20.58.220 326 423 3.3E-13 T 09-03-2017 NA29_RS02975 36da0f152bcb1216edcfc83837986649 608 Pfam PF01895 PhoU domain 340 423 2.0E-12 T 09-03-2017 IPR026022 PhoU domain NA29_RS02975 36da0f152bcb1216edcfc83837986649 608 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 306 8.8E-102 T 09-03-2017 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 NA29_RS02975 36da0f152bcb1216edcfc83837986649 608 SUPERFAMILY SSF109755 320 532 4.4E-34 T 09-03-2017 NA29_RS02975 36da0f152bcb1216edcfc83837986649 608 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 68 521 8.2E-108 T 09-03-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 NA29_RS24970 5ed56cd84abae109c7ed262e8923660b 701 PIRSF PIRSF005419 10 700 1.8E-253 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS24970 5ed56cd84abae109c7ed262e8923660b 701 Pfam PF00771 FHIPEP family 34 688 3.8E-276 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS24970 5ed56cd84abae109c7ed262e8923660b 701 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 164 182 8.6E-57 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS24970 5ed56cd84abae109c7ed262e8923660b 701 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 194 211 8.6E-57 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS24970 5ed56cd84abae109c7ed262e8923660b 701 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 245 259 8.6E-57 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS24970 5ed56cd84abae109c7ed262e8923660b 701 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 41 54 8.6E-57 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS24970 5ed56cd84abae109c7ed262e8923660b 701 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 145 161 8.6E-57 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS24970 5ed56cd84abae109c7ed262e8923660b 701 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 78 97 8.6E-57 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS24970 5ed56cd84abae109c7ed262e8923660b 701 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 150 173 - T 09-03-2017 IPR025505 FHIPEP conserved site NA29_RS24970 5ed56cd84abae109c7ed262e8923660b 701 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 24 697 1.0E-278 T 09-03-2017 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 NA29_RS11670 3e782e00f05cb7ec303fdf25674d7789 313 SUPERFAMILY SSF51161 106 289 1.32E-46 T 09-03-2017 IPR011004 Trimeric LpxA-like NA29_RS11670 3e782e00f05cb7ec303fdf25674d7789 313 Gene3D G3DSA:1.10.3130.10 34 182 2.3E-43 T 09-03-2017 NA29_RS11670 3e782e00f05cb7ec303fdf25674d7789 313 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 248 282 1.8E-7 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS11670 3e782e00f05cb7ec303fdf25674d7789 313 Gene3D G3DSA:2.160.10.10 183 294 3.3E-27 T 09-03-2017 NA29_RS19205 aefd951c2638b6b9da6a81dff41c92c5 308 Gene3D G3DSA:3.40.190.10 174 271 1.7E-24 T 09-03-2017 NA29_RS19205 aefd951c2638b6b9da6a81dff41c92c5 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 5.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19205 aefd951c2638b6b9da6a81dff41c92c5 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 5.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19205 aefd951c2638b6b9da6a81dff41c92c5 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 5.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19205 aefd951c2638b6b9da6a81dff41c92c5 308 Gene3D G3DSA:3.40.190.10 275 302 1.1E-27 T 09-03-2017 NA29_RS19205 aefd951c2638b6b9da6a81dff41c92c5 308 Gene3D G3DSA:3.40.190.10 91 173 1.1E-27 T 09-03-2017 NA29_RS19205 aefd951c2638b6b9da6a81dff41c92c5 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.3E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19205 aefd951c2638b6b9da6a81dff41c92c5 308 Pfam PF03466 LysR substrate binding domain 97 298 2.4E-23 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS19205 aefd951c2638b6b9da6a81dff41c92c5 308 Gene3D G3DSA:1.10.10.10 2 85 2.1E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19205 aefd951c2638b6b9da6a81dff41c92c5 308 SUPERFAMILY SSF46785 7 86 8.5E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19205 aefd951c2638b6b9da6a81dff41c92c5 308 SUPERFAMILY SSF53850 91 298 3.41E-42 T 09-03-2017 NA29_RS11285 fdd9e66a2c977a969ac2390206defacb 322 SUPERFAMILY SSF51735 101 282 2.21E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11285 fdd9e66a2c977a969ac2390206defacb 322 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 281 1.0E-49 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NA29_RS11285 fdd9e66a2c977a969ac2390206defacb 322 SUPERFAMILY SSF52283 45 135 8.69E-27 T 09-03-2017 NA29_RS11285 fdd9e66a2c977a969ac2390206defacb 322 Gene3D G3DSA:3.40.50.720 47 116 5.9E-25 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11285 fdd9e66a2c977a969ac2390206defacb 322 Gene3D G3DSA:3.40.50.720 117 282 3.2E-57 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11285 fdd9e66a2c977a969ac2390206defacb 322 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 46 313 7.8E-21 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 NA29_RS07850 6d0b7c3854c6d587941136de039fa77c 64 Pfam PF01361 Tautomerase enzyme 5 57 1.9E-12 T 09-03-2017 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 NA29_RS07850 6d0b7c3854c6d587941136de039fa77c 64 Gene3D G3DSA:3.30.429.20 1 62 5.8E-24 T 09-03-2017 NA29_RS07850 6d0b7c3854c6d587941136de039fa77c 64 SUPERFAMILY SSF55331 2 62 2.36E-18 T 09-03-2017 IPR014347 Tautomerase/MIF superfamily NA29_RS24965 f7dae027698fce47e58867b2bbb480bd 421 SMART SM00382 180 352 2.0E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS24965 f7dae027698fce47e58867b2bbb480bd 421 Pfam PF00448 SRP54-type protein, GTPase domain 183 377 2.8E-33 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 NA29_RS24965 f7dae027698fce47e58867b2bbb480bd 421 Gene3D G3DSA:1.20.120.140 127 192 1.2E-5 T 09-03-2017 NA29_RS24965 f7dae027698fce47e58867b2bbb480bd 421 SUPERFAMILY SSF52540 178 365 1.23E-29 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24965 f7dae027698fce47e58867b2bbb480bd 421 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 269 4.3E-83 T 09-03-2017 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 NA29_RS24965 f7dae027698fce47e58867b2bbb480bd 421 Gene3D G3DSA:3.40.50.300 193 376 8.9E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24965 f7dae027698fce47e58867b2bbb480bd 421 SMART SM00962 181 379 8.3E-51 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 NA29_RS11380 33d9fc2c5c88764a67398e3bcb4afa55 323 Pfam PF06719 AraC-type transcriptional regulator N-terminus 39 189 1.6E-39 T 09-03-2017 IPR009594 Transcription regulator HTH, AraC, N-terminal NA29_RS11380 33d9fc2c5c88764a67398e3bcb4afa55 323 SUPERFAMILY SSF46689 202 252 1.23E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS11380 33d9fc2c5c88764a67398e3bcb4afa55 323 Gene3D G3DSA:1.10.10.60 256 300 3.9E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS11380 33d9fc2c5c88764a67398e3bcb4afa55 323 SMART SM00342 218 302 6.5E-23 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS11380 33d9fc2c5c88764a67398e3bcb4afa55 323 Gene3D G3DSA:1.10.10.60 203 255 1.1E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS11380 33d9fc2c5c88764a67398e3bcb4afa55 323 SUPERFAMILY SSF46689 255 305 1.48E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS11380 33d9fc2c5c88764a67398e3bcb4afa55 323 Pfam PF12833 Helix-turn-helix domain 224 299 2.6E-19 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS09390 2acac2b09c86f354ebc150efe6d56f72 512 SMART SM00267 341 512 7.0E-59 T 09-03-2017 IPR000160 GGDEF domain NA29_RS09390 2acac2b09c86f354ebc150efe6d56f72 512 SUPERFAMILY SSF55073 357 511 5.1E-47 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS09390 2acac2b09c86f354ebc150efe6d56f72 512 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 349 510 2.0E-45 T 09-03-2017 IPR000160 GGDEF domain NA29_RS09390 2acac2b09c86f354ebc150efe6d56f72 512 Pfam PF00990 Diguanylate cyclase, GGDEF domain 352 508 2.9E-42 T 09-03-2017 IPR000160 GGDEF domain NA29_RS09390 2acac2b09c86f354ebc150efe6d56f72 512 Gene3D G3DSA:3.30.70.270 354 511 9.6E-53 T 09-03-2017 NA29_RS09390 2acac2b09c86f354ebc150efe6d56f72 512 SUPERFAMILY SSF103190 52 183 7.32E-6 T 09-03-2017 IPR029151 Periplasmic sensor domain-like NA29_RS01765 75416c911853d4e2c29fbf8467fb4c53 219 SUPERFAMILY SSF51197 23 218 3.16E-54 T 09-03-2017 NA29_RS01765 75416c911853d4e2c29fbf8467fb4c53 219 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 39 216 2.1E-50 T 09-03-2017 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like NA29_RS01765 75416c911853d4e2c29fbf8467fb4c53 219 Gene3D G3DSA:2.60.120.590 24 218 8.6E-50 T 09-03-2017 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like NA29_RS04830 fee2d0d09306003919ea5ed3d5eb3666 680 Pfam PF00884 Sulfatase 296 590 4.7E-18 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NA29_RS04830 fee2d0d09306003919ea5ed3d5eb3666 680 SUPERFAMILY SSF53649 294 619 1.74E-27 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NA29_RS04830 fee2d0d09306003919ea5ed3d5eb3666 680 Gene3D G3DSA:3.40.720.10 374 595 1.5E-20 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NA29_RS20290 a8f9c0cb13bf88cf3b2cf28604745728 508 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 232 292 1.2E-20 T 09-03-2017 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 NA29_RS20290 a8f9c0cb13bf88cf3b2cf28604745728 508 Pfam PF01743 Poly A polymerase head domain 61 205 2.2E-33 T 09-03-2017 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 NA29_RS20290 a8f9c0cb13bf88cf3b2cf28604745728 508 Gene3D G3DSA:3.30.460.10 43 204 2.7E-48 T 09-03-2017 NA29_RS20290 a8f9c0cb13bf88cf3b2cf28604745728 508 SUPERFAMILY SSF81301 32 202 3.49E-37 T 09-03-2017 NA29_RS20290 a8f9c0cb13bf88cf3b2cf28604745728 508 SUPERFAMILY SSF81891 203 436 1.16E-53 T 09-03-2017 NA29_RS20290 a8f9c0cb13bf88cf3b2cf28604745728 508 Pfam PF12626 Polymerase A arginine-rich C-terminus 346 464 5.6E-41 T 09-03-2017 IPR025866 Polymerase A arginine-rich C-terminal domain NA29_RS20290 a8f9c0cb13bf88cf3b2cf28604745728 508 Gene3D G3DSA:1.10.3090.10 205 434 2.7E-48 T 09-03-2017 NA29_RS20290 a8f9c0cb13bf88cf3b2cf28604745728 508 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 30 468 6.2E-148 T 09-03-2017 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 NA29_RS20290 a8f9c0cb13bf88cf3b2cf28604745728 508 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 22 467 36.398 T 09-03-2017 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 NA29_RS24345 27887de9c7a5c956bbded5bba4f4bef9 257 Hamap MF_01830 UPF0317 protein . 2 256 52.12 T 09-03-2017 IPR016938 Uncharacterised protein family UPF0317 NA29_RS24345 27887de9c7a5c956bbded5bba4f4bef9 257 Gene3D G3DSA:3.40.1640.10 2 158 1.3E-61 T 09-03-2017 NA29_RS24345 27887de9c7a5c956bbded5bba4f4bef9 257 PIRSF PIRSF029755 1 257 1.6E-112 T 09-03-2017 IPR016938 Uncharacterised protein family UPF0317 NA29_RS24345 27887de9c7a5c956bbded5bba4f4bef9 257 Pfam PF07286 Protein of unknown function (DUF1445) 106 248 2.0E-64 T 09-03-2017 IPR009906 Protein of unknown function DUF1445 NA29_RS24345 27887de9c7a5c956bbded5bba4f4bef9 257 SUPERFAMILY SSF160920 2 249 2.22E-109 T 09-03-2017 NA29_RS00885 65668e8315e8215b3820641a38c70178 363 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 122 141 8.0E-18 T 09-03-2017 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 NA29_RS00885 65668e8315e8215b3820641a38c70178 363 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 141 164 8.0E-18 T 09-03-2017 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 NA29_RS00885 65668e8315e8215b3820641a38c70178 363 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 307 329 8.0E-18 T 09-03-2017 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 NA29_RS00885 65668e8315e8215b3820641a38c70178 363 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 169 190 8.0E-18 T 09-03-2017 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 NA29_RS00885 65668e8315e8215b3820641a38c70178 363 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 335 362 8.0E-18 T 09-03-2017 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 NA29_RS00885 65668e8315e8215b3820641a38c70178 363 Pfam PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) 92 179 5.4E-12 T 09-03-2017 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 NA29_RS00565 285f372cea952d3f947f1c6f4f4ccf3f 255 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS00565 285f372cea952d3f947f1c6f4f4ccf3f 255 Pfam PF00005 ABC transporter 21 178 4.5E-26 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS00565 285f372cea952d3f947f1c6f4f4ccf3f 255 Gene3D G3DSA:3.40.50.300 2 245 1.9E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00565 285f372cea952d3f947f1c6f4f4ccf3f 255 SUPERFAMILY SSF52540 5 246 8.38E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00565 285f372cea952d3f947f1c6f4f4ccf3f 255 SMART SM00382 30 225 1.1E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS00565 285f372cea952d3f947f1c6f4f4ccf3f 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 225 247 1.9E-8 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS12260 6b4d022c38e432ab770565a511ab8a30 238 Pfam PF03358 NADPH-dependent FMN reductase 23 166 2.4E-28 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 NA29_RS12260 6b4d022c38e432ab770565a511ab8a30 238 Gene3D G3DSA:3.40.50.360 18 216 2.5E-101 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS12260 6b4d022c38e432ab770565a511ab8a30 238 SUPERFAMILY SSF52218 18 216 1.26E-63 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS12260 6b4d022c38e432ab770565a511ab8a30 238 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 17 215 3.7E-116 T 09-03-2017 IPR014063 Arsenate resistance ArsH NA29_RS06470 9cfdd72bb3cb2ef13a70f9b139bccf0f 304 Hamap MF_00109 Shikimate kinase [aroK]. 131 298 19.812 T 09-03-2017 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 NA29_RS06470 9cfdd72bb3cb2ef13a70f9b139bccf0f 304 Pfam PF13560 Helix-turn-helix domain 25 83 3.7E-11 T 09-03-2017 NA29_RS06470 9cfdd72bb3cb2ef13a70f9b139bccf0f 304 SMART SM00530 29 84 1.6E-12 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS06470 9cfdd72bb3cb2ef13a70f9b139bccf0f 304 Pfam PF01202 Shikimate kinase 140 281 2.4E-31 T 09-03-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 NA29_RS06470 9cfdd72bb3cb2ef13a70f9b139bccf0f 304 Gene3D G3DSA:3.40.50.300 146 288 2.6E-35 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06470 9cfdd72bb3cb2ef13a70f9b139bccf0f 304 Gene3D G3DSA:3.40.50.300 108 145 1.6E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06470 9cfdd72bb3cb2ef13a70f9b139bccf0f 304 Gene3D G3DSA:1.10.260.40 21 90 9.2E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS06470 9cfdd72bb3cb2ef13a70f9b139bccf0f 304 SUPERFAMILY SSF52540 133 294 4.46E-21 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06470 9cfdd72bb3cb2ef13a70f9b139bccf0f 304 SUPERFAMILY SSF47413 21 89 1.29E-14 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS06470 9cfdd72bb3cb2ef13a70f9b139bccf0f 304 PRINTS PR01100 Shikimate kinase family signature 134 149 1.0E-13 T 09-03-2017 NA29_RS06470 9cfdd72bb3cb2ef13a70f9b139bccf0f 304 PRINTS PR01100 Shikimate kinase family signature 158 171 1.0E-13 T 09-03-2017 NA29_RS06470 9cfdd72bb3cb2ef13a70f9b139bccf0f 304 PRINTS PR01100 Shikimate kinase family signature 186 194 1.0E-13 T 09-03-2017 NA29_RS06470 9cfdd72bb3cb2ef13a70f9b139bccf0f 304 PRINTS PR01100 Shikimate kinase family signature 205 214 1.0E-13 T 09-03-2017 NA29_RS06470 9cfdd72bb3cb2ef13a70f9b139bccf0f 304 PRINTS PR01100 Shikimate kinase family signature 226 243 1.0E-13 T 09-03-2017 NA29_RS03575 7863f94c1d3e9dd5874d79e5badc30f6 541 SUPERFAMILY SSF56801 15 524 2.88E-118 T 09-03-2017 NA29_RS03575 7863f94c1d3e9dd5874d79e5badc30f6 541 Pfam PF13193 AMP-binding enzyme C-terminal domain 438 513 3.1E-14 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS03575 7863f94c1d3e9dd5874d79e5badc30f6 541 Gene3D G3DSA:3.40.50.980 22 191 4.4E-30 T 09-03-2017 NA29_RS03575 7863f94c1d3e9dd5874d79e5badc30f6 541 Gene3D G3DSA:3.30.300.30 424 521 1.8E-25 T 09-03-2017 NA29_RS03575 7863f94c1d3e9dd5874d79e5badc30f6 541 Pfam PF00501 AMP-binding enzyme 30 429 2.6E-65 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS03575 7863f94c1d3e9dd5874d79e5badc30f6 541 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS03575 7863f94c1d3e9dd5874d79e5badc30f6 541 Gene3D G3DSA:2.30.38.10 346 422 2.9E-19 T 09-03-2017 NA29_RS03575 7863f94c1d3e9dd5874d79e5badc30f6 541 Gene3D G3DSA:3.40.50.980 192 334 2.5E-20 T 09-03-2017 NA29_RS03575 7863f94c1d3e9dd5874d79e5badc30f6 541 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 264 275 - T 09-03-2017 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 Gene3D G3DSA:3.30.2090.10 185 266 3.6E-14 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 Gene3D G3DSA:3.30.2090.10 726 818 1.3E-7 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 SUPERFAMILY SSF82866 291 489 6.54E-41 T 09-03-2017 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 SUPERFAMILY SSF82714 185 265 1.1E-14 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 SUPERFAMILY SSF82693 137 182 1.36E-15 T 09-03-2017 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 SUPERFAMILY SSF82693 268 324 1.36E-15 T 09-03-2017 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 SUPERFAMILY SSF82693 40 135 4.81E-14 T 09-03-2017 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 SUPERFAMILY SSF82714 726 818 2.35E-7 T 09-03-2017 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 Gene3D G3DSA:3.30.70.1430 40 141 5.2E-14 T 09-03-2017 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 Pfam PF00873 AcrB/AcrD/AcrF family 3 1039 2.5E-199 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 Gene3D G3DSA:1.10.3850.10 272 490 1.5E-54 T 09-03-2017 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 Gene3D G3DSA:1.10.3850.10 825 1038 6.6E-54 T 09-03-2017 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 SUPERFAMILY SSF82866 817 1041 1.7E-47 T 09-03-2017 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 8.6E-41 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 8.6E-41 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 8.6E-41 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 8.6E-41 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 8.6E-41 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 8.6E-41 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 8.6E-41 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS12410 3ec801998e589b2d8a957bdbf6476164 1070 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 8.6E-41 T 09-03-2017 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 NA29_RS21785 17244ff0f0c13cfbb7695bd81f10ffea 322 Gene3D G3DSA:2.40.160.20 251 322 7.5E-4 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NA29_RS21785 17244ff0f0c13cfbb7695bd81f10ffea 322 SUPERFAMILY SSF103515 71 322 1.83E-5 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS04540 a34aa7545edc21675d0ba3faf9b40407 131 ProSitePatterns PS00360 Ribosomal protein S9 signature. 70 88 - T 09-03-2017 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 NA29_RS04540 a34aa7545edc21675d0ba3faf9b40407 131 Pfam PF00380 Ribosomal protein S9/S16 11 131 7.0E-46 T 09-03-2017 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 NA29_RS04540 a34aa7545edc21675d0ba3faf9b40407 131 SUPERFAMILY SSF54211 7 131 9.48E-45 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS04540 a34aa7545edc21675d0ba3faf9b40407 131 Gene3D G3DSA:3.30.230.10 8 131 3.3E-50 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NA29_RS04540 a34aa7545edc21675d0ba3faf9b40407 131 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 2 131 30.963 T 09-03-2017 IPR023035 Ribosomal protein S9, bacterial/plastid NA29_RS24245 c7adf03a4922736440cc3ae9b4707116 261 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 135 155 - T 09-03-2017 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 NA29_RS24245 c7adf03a4922736440cc3ae9b4707116 261 Gene3D G3DSA:3.10.50.40 90 220 2.3E-23 T 09-03-2017 NA29_RS24245 c7adf03a4922736440cc3ae9b4707116 261 Pfam PF00639 PPIC-type PPIASE domain 103 195 1.9E-13 T 09-03-2017 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 NA29_RS24245 c7adf03a4922736440cc3ae9b4707116 261 SUPERFAMILY SSF54534 93 197 3.6E-17 T 09-03-2017 NA29_RS00530 c58ea0f0e6c948e4753f8eec7024ad8b 306 SUPERFAMILY SSF46785 11 119 9.99E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00530 c58ea0f0e6c948e4753f8eec7024ad8b 306 Pfam PF03466 LysR substrate binding domain 98 303 3.2E-40 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS00530 c58ea0f0e6c948e4753f8eec7024ad8b 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 71 1.2E-14 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00530 c58ea0f0e6c948e4753f8eec7024ad8b 306 Gene3D G3DSA:3.40.190.10 185 272 3.1E-18 T 09-03-2017 NA29_RS00530 c58ea0f0e6c948e4753f8eec7024ad8b 306 Gene3D G3DSA:1.10.10.10 14 95 1.6E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00530 c58ea0f0e6c948e4753f8eec7024ad8b 306 Gene3D G3DSA:3.40.190.10 98 184 1.0E-13 T 09-03-2017 NA29_RS00530 c58ea0f0e6c948e4753f8eec7024ad8b 306 SUPERFAMILY SSF53850 99 305 7.36E-38 T 09-03-2017 NA29_RS24585 3161d6204f988de95e69ee31487f5ef8 264 SUPERFAMILY SSF51658 1 259 3.04E-84 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain NA29_RS24585 3161d6204f988de95e69ee31487f5ef8 264 PIRSF PIRSF006241 1 261 7.8E-97 T 09-03-2017 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 NA29_RS24585 3161d6204f988de95e69ee31487f5ef8 264 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 4.5E-35 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain NA29_RS24585 3161d6204f988de95e69ee31487f5ef8 264 Gene3D G3DSA:3.20.20.150 1 259 2.5E-92 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain NA29_RS19940 35de27d3b3718907a18055897b7a3305 180 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 25 179 17.582 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 NA29_RS19940 35de27d3b3718907a18055897b7a3305 180 ProSitePatterns PS00855 Signal peptidases II signature. 121 133 - T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 NA29_RS19940 35de27d3b3718907a18055897b7a3305 180 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 118 133 3.8E-19 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 NA29_RS19940 35de27d3b3718907a18055897b7a3305 180 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 71 79 3.8E-19 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 NA29_RS19940 35de27d3b3718907a18055897b7a3305 180 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 154 170 3.8E-19 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 NA29_RS19940 35de27d3b3718907a18055897b7a3305 180 TIGRFAM TIGR00077 lspA: signal peptidase II 32 176 6.4E-43 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 NA29_RS19940 35de27d3b3718907a18055897b7a3305 180 Pfam PF01252 Signal peptidase (SPase) II 33 173 2.3E-40 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 NA29_RS01220 d7c5b2fc9bf89cfdef80c75a30dad2f5 250 SMART SM00382 29 222 2.7E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS01220 d7c5b2fc9bf89cfdef80c75a30dad2f5 250 Pfam PF00005 ABC transporter 21 176 1.6E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS01220 d7c5b2fc9bf89cfdef80c75a30dad2f5 250 SUPERFAMILY SSF52540 4 246 9.84E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01220 d7c5b2fc9bf89cfdef80c75a30dad2f5 250 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 245 1.7E-4 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS01220 d7c5b2fc9bf89cfdef80c75a30dad2f5 250 Gene3D G3DSA:3.40.50.300 4 242 8.3E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02090 6405db79a1a3bf90741707c1d08fe0b5 226 Gene3D G3DSA:3.40.30.10 28 192 4.2E-49 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS02090 6405db79a1a3bf90741707c1d08fe0b5 226 Pfam PF01323 DSBA-like thioredoxin domain 49 195 3.5E-11 T 09-03-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 NA29_RS02090 6405db79a1a3bf90741707c1d08fe0b5 226 ProSitePatterns PS00194 Thioredoxin family active site. 49 67 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 NA29_RS02090 6405db79a1a3bf90741707c1d08fe0b5 226 PIRSF PIRSF001488 1 225 3.9E-45 T 09-03-2017 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL NA29_RS02090 6405db79a1a3bf90741707c1d08fe0b5 226 SUPERFAMILY SSF52833 26 186 4.35E-36 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS01135 e6d147e8fa25908cf082d9d6b69762c7 166 Pfam PF04314 Protein of unknown function (DUF461) 28 131 3.5E-33 T 09-03-2017 IPR007410 DR1885-like metal-binding protein NA29_RS01135 e6d147e8fa25908cf082d9d6b69762c7 166 SUPERFAMILY SSF110087 4 141 1.44E-41 T 09-03-2017 IPR007410 DR1885-like metal-binding protein NA29_RS19740 30dcc08dc8cbb8c6a4e4cb985389e94e 438 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 247 364 2.7E-10 T 09-03-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 NA29_RS19740 30dcc08dc8cbb8c6a4e4cb985389e94e 438 TIGRFAM TIGR04414 hepto_Aah_TibC: autotransporter strand-loop-strand O-heptosyltransferase 51 426 7.1E-161 T 09-03-2017 IPR030929 Glycosyltransferase Aah/TibC GO:0016757 NA29_RS19740 30dcc08dc8cbb8c6a4e4cb985389e94e 438 Gene3D G3DSA:3.40.50.2000 251 426 3.7E-24 T 09-03-2017 NA29_RS19740 30dcc08dc8cbb8c6a4e4cb985389e94e 438 SUPERFAMILY SSF53756 142 426 6.59E-23 T 09-03-2017 NA29_RS24385 c1d5d981ae49f3859ae13896822a66b0 482 Gene3D G3DSA:3.90.550.10 10 279 8.9E-79 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS24385 c1d5d981ae49f3859ae13896822a66b0 482 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 11 477 2.3E-173 T 09-03-2017 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 NA29_RS24385 c1d5d981ae49f3859ae13896822a66b0 482 SUPERFAMILY SSF51182 195 477 8.91E-75 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS24385 c1d5d981ae49f3859ae13896822a66b0 482 SUPERFAMILY SSF53448 11 288 1.36E-61 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS24385 c1d5d981ae49f3859ae13896822a66b0 482 Gene3D G3DSA:2.60.120.10 365 480 7.2E-47 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS24385 c1d5d981ae49f3859ae13896822a66b0 482 Pfam PF00483 Nucleotidyl transferase 13 293 1.2E-49 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 NA29_RS24385 c1d5d981ae49f3859ae13896822a66b0 482 Pfam PF01050 Mannose-6-phosphate isomerase 323 473 1.4E-68 T 09-03-2017 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 NA29_RS10040 64a03a2420c98f6cd02bf9b276a2c677 173 SUPERFAMILY SSF69765 17 171 1.2E-66 T 09-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 NA29_RS10040 64a03a2420c98f6cd02bf9b276a2c677 173 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 17 172 36.89 T 09-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 NA29_RS10040 64a03a2420c98f6cd02bf9b276a2c677 173 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 18 171 3.5E-67 T 09-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 NA29_RS10040 64a03a2420c98f6cd02bf9b276a2c677 173 Gene3D G3DSA:3.30.1330.50 16 171 5.6E-72 T 09-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 NA29_RS10040 64a03a2420c98f6cd02bf9b276a2c677 173 Pfam PF02542 YgbB family 18 170 1.9E-65 T 09-03-2017 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 NA29_RS10040 64a03a2420c98f6cd02bf9b276a2c677 173 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 51 66 - T 09-03-2017 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 NA29_RS12615 dd992d45fbbbca717a747619c212a735 1004 Gene3D G3DSA:3.30.450.20 430 538 1.1E-7 T 09-03-2017 NA29_RS12615 dd992d45fbbbca717a747619c212a735 1004 Gene3D G3DSA:3.20.20.450 723 968 6.3E-73 T 09-03-2017 IPR001633 EAL domain NA29_RS12615 dd992d45fbbbca717a747619c212a735 1004 SMART SM00052 719 966 1.9E-65 T 09-03-2017 IPR001633 EAL domain NA29_RS12615 dd992d45fbbbca717a747619c212a735 1004 SMART SM00267 538 707 3.0E-43 T 09-03-2017 IPR000160 GGDEF domain NA29_RS12615 dd992d45fbbbca717a747619c212a735 1004 SUPERFAMILY SSF141868 725 968 1.31E-67 T 09-03-2017 IPR001633 EAL domain NA29_RS12615 dd992d45fbbbca717a747619c212a735 1004 SUPERFAMILY SSF55073 554 707 6.59E-36 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS12615 dd992d45fbbbca717a747619c212a735 1004 SUPERFAMILY SSF55785 436 538 1.43E-5 T 09-03-2017 IPR000014 PAS domain NA29_RS12615 dd992d45fbbbca717a747619c212a735 1004 Pfam PF00990 Diguanylate cyclase, GGDEF domain 550 702 6.2E-33 T 09-03-2017 IPR000160 GGDEF domain NA29_RS12615 dd992d45fbbbca717a747619c212a735 1004 Gene3D G3DSA:3.30.70.270 551 708 7.4E-43 T 09-03-2017 NA29_RS12615 dd992d45fbbbca717a747619c212a735 1004 Pfam PF00563 EAL domain 726 961 3.4E-61 T 09-03-2017 IPR001633 EAL domain NA29_RS12615 dd992d45fbbbca717a747619c212a735 1004 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 547 707 3.8E-34 T 09-03-2017 IPR000160 GGDEF domain NA29_RS24810 64b30e00a359bdc4107adff6221a65d8 565 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 16 558 1.6E-131 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 NA29_RS24810 64b30e00a359bdc4107adff6221a65d8 565 Pfam PF01514 Secretory protein of YscJ/FliF family 33 221 1.5E-78 T 09-03-2017 IPR006182 Secretory protein YscJ/FliF NA29_RS24810 64b30e00a359bdc4107adff6221a65d8 565 PRINTS PR01009 Flagellar M-ring protein signature 122 140 4.3E-41 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 NA29_RS24810 64b30e00a359bdc4107adff6221a65d8 565 PRINTS PR01009 Flagellar M-ring protein signature 154 168 4.3E-41 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 NA29_RS24810 64b30e00a359bdc4107adff6221a65d8 565 PRINTS PR01009 Flagellar M-ring protein signature 197 215 4.3E-41 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 NA29_RS24810 64b30e00a359bdc4107adff6221a65d8 565 PRINTS PR01009 Flagellar M-ring protein signature 362 386 4.3E-41 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 NA29_RS24810 64b30e00a359bdc4107adff6221a65d8 565 PRINTS PR01009 Flagellar M-ring protein signature 266 284 4.3E-41 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 NA29_RS24810 64b30e00a359bdc4107adff6221a65d8 565 PIRSF PIRSF004862 12 563 2.6E-156 T 09-03-2017 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 NA29_RS24810 64b30e00a359bdc4107adff6221a65d8 565 Pfam PF08345 Flagellar M-ring protein C-terminal 253 438 1.3E-50 T 09-03-2017 IPR013556 Flagellar M-ring C-terminal NA29_RS04940 5b8cb49225d207e0f4515bd1a906b447 159 SUPERFAMILY SSF47240 1 154 2.92E-52 T 09-03-2017 IPR009078 Ferritin-like superfamily NA29_RS04940 5b8cb49225d207e0f4515bd1a906b447 159 PRINTS PR00601 Bacterioferritin signature 3 22 7.1E-66 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NA29_RS04940 5b8cb49225d207e0f4515bd1a906b447 159 PRINTS PR00601 Bacterioferritin signature 128 149 7.1E-66 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NA29_RS04940 5b8cb49225d207e0f4515bd1a906b447 159 PRINTS PR00601 Bacterioferritin signature 44 64 7.1E-66 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NA29_RS04940 5b8cb49225d207e0f4515bd1a906b447 159 PRINTS PR00601 Bacterioferritin signature 65 85 7.1E-66 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NA29_RS04940 5b8cb49225d207e0f4515bd1a906b447 159 PRINTS PR00601 Bacterioferritin signature 107 127 7.1E-66 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NA29_RS04940 5b8cb49225d207e0f4515bd1a906b447 159 PRINTS PR00601 Bacterioferritin signature 23 43 7.1E-66 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NA29_RS04940 5b8cb49225d207e0f4515bd1a906b447 159 PRINTS PR00601 Bacterioferritin signature 86 106 7.1E-66 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NA29_RS04940 5b8cb49225d207e0f4515bd1a906b447 159 Gene3D G3DSA:1.20.1260.10 1 155 9.4E-62 T 09-03-2017 IPR012347 Ferritin-related NA29_RS04940 5b8cb49225d207e0f4515bd1a906b447 159 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NA29_RS04940 5b8cb49225d207e0f4515bd1a906b447 159 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 2.9E-70 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NA29_RS04940 5b8cb49225d207e0f4515bd1a906b447 159 PIRSF PIRSF002560 1 156 9.0E-70 T 09-03-2017 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 NA29_RS04940 5b8cb49225d207e0f4515bd1a906b447 159 Pfam PF00210 Ferritin-like domain 9 142 2.8E-38 T 09-03-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 NA29_RS12950 27d843eaccbf420021f077fe28f5bdfd 474 Pfam PF14403 Circularly permuted ATP-grasp type 2 71 450 2.2E-165 T 09-03-2017 IPR025841 Circularly permuted ATP-grasp type 2 NA29_RS12950 27d843eaccbf420021f077fe28f5bdfd 474 PIRSF PIRSF005522 1 474 2.9E-230 T 09-03-2017 IPR016450 Uncharacterised conserved protein UCP005522 NA29_RS12950 27d843eaccbf420021f077fe28f5bdfd 474 SUPERFAMILY SSF56059 15 212 2.54E-63 T 09-03-2017 NA29_RS12950 27d843eaccbf420021f077fe28f5bdfd 474 SUPERFAMILY SSF56059 319 465 2.54E-63 T 09-03-2017 NA29_RS01270 074f5d3119e7ae7747310d2f67b2ad69 220 Gene3D G3DSA:1.10.357.10 30 219 3.3E-47 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS01270 074f5d3119e7ae7747310d2f67b2ad69 220 SUPERFAMILY SSF46689 28 102 7.98E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS01270 074f5d3119e7ae7747310d2f67b2ad69 220 SUPERFAMILY SSF48498 108 220 3.56E-12 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS01270 074f5d3119e7ae7747310d2f67b2ad69 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 57 85 2.5E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS22640 05c534c63f1f30b79f10fedd6eac6a55 374 Pfam PF12698 ABC-2 family transporter protein 24 363 1.2E-30 T 09-03-2017 NA29_RS08510 021ddbb2032f389ab90a4103e0c7c863 118 Pfam PF01042 Endoribonuclease L-PSP 9 116 1.4E-21 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family NA29_RS08510 021ddbb2032f389ab90a4103e0c7c863 118 SUPERFAMILY SSF55298 9 117 3.14E-29 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS08510 021ddbb2032f389ab90a4103e0c7c863 118 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 93 111 - T 09-03-2017 IPR019897 RidA, conserved site NA29_RS08510 021ddbb2032f389ab90a4103e0c7c863 118 Gene3D G3DSA:3.30.1330.40 9 117 4.1E-23 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS19085 1951d591347db54cdbe355d5dc62fbd6 461 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 74 3.9E-12 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS19085 1951d591347db54cdbe355d5dc62fbd6 461 Gene3D G3DSA:1.10.10.10 15 81 1.9E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19085 1951d591347db54cdbe355d5dc62fbd6 461 Pfam PF00155 Aminotransferase class I and II 96 449 1.5E-35 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS19085 1951d591347db54cdbe355d5dc62fbd6 461 SMART SM00345 15 74 4.1E-13 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS19085 1951d591347db54cdbe355d5dc62fbd6 461 SUPERFAMILY SSF46785 6 78 1.12E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19085 1951d591347db54cdbe355d5dc62fbd6 461 Gene3D G3DSA:3.40.640.10 124 353 6.6E-59 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS19085 1951d591347db54cdbe355d5dc62fbd6 461 SUPERFAMILY SSF53383 68 458 3.4E-79 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS21640 c743429546a6f4af685aa264bb47f25c 276 SUPERFAMILY SSF69593 22 222 1.31E-28 T 09-03-2017 NA29_RS21640 c743429546a6f4af685aa264bb47f25c 276 Gene3D G3DSA:3.40.1130.10 38 181 4.8E-14 T 09-03-2017 NA29_RS21640 c743429546a6f4af685aa264bb47f25c 276 SMART SM00563 64 176 1.4E-29 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 NA29_RS21640 c743429546a6f4af685aa264bb47f25c 276 Pfam PF01553 Acyltransferase 51 172 3.7E-23 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 NA29_RS07340 3e1f3c44d500a1123a38e521412fae71 275 Gene3D G3DSA:3.40.630.30 35 236 2.6E-42 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS07340 3e1f3c44d500a1123a38e521412fae71 275 Pfam PF13444 Acetyltransferase (GNAT) domain 50 149 2.5E-36 T 09-03-2017 NA29_RS07340 3e1f3c44d500a1123a38e521412fae71 275 SUPERFAMILY SSF55729 33 239 5.76E-47 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS09450 d81afae03ddc727128ea63b4b49e6a92 298 Gene3D G3DSA:3.20.20.410 2 297 8.9E-88 T 09-03-2017 IPR002763 Protein of unknown function DUF72 NA29_RS09450 d81afae03ddc727128ea63b4b49e6a92 298 Pfam PF01904 Protein of unknown function DUF72 23 294 1.2E-58 T 09-03-2017 IPR002763 Protein of unknown function DUF72 NA29_RS09450 d81afae03ddc727128ea63b4b49e6a92 298 SUPERFAMILY SSF117396 2 297 9.55E-71 T 09-03-2017 IPR002763 Protein of unknown function DUF72 NA29_RS21020 6b3ec65293963abfec65fc337074ee2f 214 SUPERFAMILY SSF53448 10 206 1.98E-33 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS21020 6b3ec65293963abfec65fc337074ee2f 214 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 9 209 28.186 T 09-03-2017 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 NA29_RS21020 6b3ec65293963abfec65fc337074ee2f 214 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 11 206 1.1E-65 T 09-03-2017 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 NA29_RS21020 6b3ec65293963abfec65fc337074ee2f 214 Gene3D G3DSA:3.90.550.10 9 206 1.4E-53 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS21020 6b3ec65293963abfec65fc337074ee2f 214 Pfam PF12804 MobA-like NTP transferase domain 13 186 2.3E-31 T 09-03-2017 IPR025877 MobA-like NTP transferase NA29_RS20505 33dd118a1a67bbe9b74401efdf07efc1 271 Gene3D G3DSA:1.10.3720.10 13 210 9.8E-48 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS20505 33dd118a1a67bbe9b74401efdf07efc1 271 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 4.7E-31 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NA29_RS20505 33dd118a1a67bbe9b74401efdf07efc1 271 SUPERFAMILY SSF161098 14 202 3.53E-46 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS20505 33dd118a1a67bbe9b74401efdf07efc1 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 208 1.1E-21 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16940 b755be6b22cca253a4e740094ba175b7 284 SUPERFAMILY SSF48576 8 276 4.32E-69 T 09-03-2017 IPR008949 Isoprenoid synthase domain NA29_RS16940 b755be6b22cca253a4e740094ba175b7 284 TIGRFAM TIGR03464 HpnC: squalene synthase HpnC 6 273 3.6E-107 T 09-03-2017 IPR017827 Squalene synthase HpnC NA29_RS16940 b755be6b22cca253a4e740094ba175b7 284 Pfam PF00494 Squalene/phytoene synthase 9 262 1.5E-62 T 09-03-2017 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 NA29_RS16940 b755be6b22cca253a4e740094ba175b7 284 Gene3D G3DSA:1.10.600.10 11 276 3.2E-61 T 09-03-2017 IPR008949 Isoprenoid synthase domain NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 709 719 2.4E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 691 705 2.4E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 PRINTS PR00344 Bacterial sensor protein C-terminal signature 720 738 2.4E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 Pfam PF00512 His Kinase A (phospho-acceptor) domain 530 596 4.2E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 SUPERFAMILY SSF55874 603 745 1.7E-27 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 SMART SM00091 390 453 0.0073 T 09-03-2017 IPR000014 PAS domain NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 SUPERFAMILY SSF158472 326 373 1.44E-8 T 09-03-2017 NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 PIRSF PIRSF037532 4 770 4.9E-224 T 09-03-2017 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 SMART SM00304 324 376 1.1E-8 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 SMART SM00388 527 599 1.7E-8 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 639 752 1.2E-16 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 Pfam PF00672 HAMP domain 306 372 6.3E-13 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 Gene3D G3DSA:3.30.450.20 382 518 2.6E-10 T 09-03-2017 NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 SUPERFAMILY SSF55785 380 439 2.09E-7 T 09-03-2017 IPR000014 PAS domain NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 Gene3D G3DSA:3.30.565.10 586 752 8.4E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 SUPERFAMILY SSF47384 525 596 8.24E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 Gene3D G3DSA:1.10.287.130 528 585 3.0E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS00740 9494d028a92863922236a08c0be9cb73 783 SMART SM00387 639 766 1.4E-26 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS13415 04e26ad1efa74f8926389adb164e6314 270 Gene3D G3DSA:3.30.1130.10 165 270 1.7E-27 T 09-03-2017 NA29_RS13415 04e26ad1efa74f8926389adb164e6314 270 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 12 112 1.9E-16 T 09-03-2017 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 NA29_RS13415 04e26ad1efa74f8926389adb164e6314 270 Gene3D G3DSA:3.30.1130.10 13 117 6.8E-18 T 09-03-2017 NA29_RS13415 04e26ad1efa74f8926389adb164e6314 270 Pfam PF14489 QueF-like protein 185 258 6.1E-16 T 09-03-2017 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 NA29_RS02880 c764c64d19042002c0c97f83f12e3b93 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 263 288 1.3E-52 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 NA29_RS02880 c764c64d19042002c0c97f83f12e3b93 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 92 114 1.3E-52 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 NA29_RS02880 c764c64d19042002c0c97f83f12e3b93 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 10 36 1.3E-52 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 NA29_RS02880 c764c64d19042002c0c97f83f12e3b93 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 42 54 1.3E-52 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 NA29_RS02880 c764c64d19042002c0c97f83f12e3b93 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 114 141 1.3E-52 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 NA29_RS02880 c764c64d19042002c0c97f83f12e3b93 290 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 241 263 1.3E-52 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 NA29_RS02880 c764c64d19042002c0c97f83f12e3b93 290 Gene3D G3DSA:3.40.50.170 91 285 3.9E-55 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS02880 c764c64d19042002c0c97f83f12e3b93 290 SUPERFAMILY SSF55021 7 89 4.58E-18 T 09-03-2017 NA29_RS02880 c764c64d19042002c0c97f83f12e3b93 290 Gene3D G3DSA:3.30.70.260 5 86 4.0E-26 T 09-03-2017 NA29_RS02880 c764c64d19042002c0c97f83f12e3b93 290 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 5 289 47.57 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 NA29_RS02880 c764c64d19042002c0c97f83f12e3b93 290 PIRSF PIRSF036480 5 290 1.2E-108 T 09-03-2017 NA29_RS02880 c764c64d19042002c0c97f83f12e3b93 290 Pfam PF00551 Formyl transferase 92 271 1.6E-38 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS02880 c764c64d19042002c0c97f83f12e3b93 290 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 9 289 1.3E-101 T 09-03-2017 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 NA29_RS02880 c764c64d19042002c0c97f83f12e3b93 290 SUPERFAMILY SSF53328 92 289 2.62E-60 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS18270 ac81fef5b0f2e03c954cb58e599d375f 385 Gene3D G3DSA:3.50.50.60 276 362 2.7E-33 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18270 ac81fef5b0f2e03c954cb58e599d375f 385 Gene3D G3DSA:3.50.50.60 6 181 2.7E-33 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18270 ac81fef5b0f2e03c954cb58e599d375f 385 SUPERFAMILY SSF51905 276 378 1.41E-56 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18270 ac81fef5b0f2e03c954cb58e599d375f 385 SUPERFAMILY SSF51905 8 175 1.41E-56 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18270 ac81fef5b0f2e03c954cb58e599d375f 385 Pfam PF01494 FAD binding domain 8 354 1.2E-24 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 NA29_RS18270 ac81fef5b0f2e03c954cb58e599d375f 385 SUPERFAMILY SSF54373 180 273 5.1E-11 T 09-03-2017 NA29_RS18270 ac81fef5b0f2e03c954cb58e599d375f 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 1.2E-14 T 09-03-2017 NA29_RS18270 ac81fef5b0f2e03c954cb58e599d375f 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 1.2E-14 T 09-03-2017 NA29_RS18270 ac81fef5b0f2e03c954cb58e599d375f 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 320 1.2E-14 T 09-03-2017 NA29_RS18270 ac81fef5b0f2e03c954cb58e599d375f 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.2E-14 T 09-03-2017 NA29_RS21905 f9ad8dbbe0464e6fe9b0bc6c8b6fa489 447 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 444 1.8E-176 T 09-03-2017 NA29_RS21905 f9ad8dbbe0464e6fe9b0bc6c8b6fa489 447 SUPERFAMILY SSF102114 130 372 6.67E-58 T 09-03-2017 NA29_RS21905 f9ad8dbbe0464e6fe9b0bc6c8b6fa489 447 SMART SM00729 147 363 1.1E-55 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NA29_RS21905 f9ad8dbbe0464e6fe9b0bc6c8b6fa489 447 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 445 73.749 T 09-03-2017 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 NA29_RS21905 f9ad8dbbe0464e6fe9b0bc6c8b6fa489 447 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 5.8E-30 T 09-03-2017 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 NA29_RS21905 f9ad8dbbe0464e6fe9b0bc6c8b6fa489 447 Pfam PF04055 Radical SAM superfamily 151 324 5.5E-28 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 NA29_RS21905 f9ad8dbbe0464e6fe9b0bc6c8b6fa489 447 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 441 2.9E-146 T 09-03-2017 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 NA29_RS21905 f9ad8dbbe0464e6fe9b0bc6c8b6fa489 447 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 09-03-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 NA29_RS21905 f9ad8dbbe0464e6fe9b0bc6c8b6fa489 447 Pfam PF01938 TRAM domain 378 444 4.0E-15 T 09-03-2017 IPR002792 TRAM domain NA29_RS21905 f9ad8dbbe0464e6fe9b0bc6c8b6fa489 447 Gene3D G3DSA:3.80.30.20 147 380 1.9E-78 T 09-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe NA29_RS22360 30cdd4bcdc3c5f43c8758a923a1d9344 430 Pfam PF03471 Transporter associated domain 349 420 8.8E-14 T 09-03-2017 IPR005170 Transporter-associated domain NA29_RS22360 30cdd4bcdc3c5f43c8758a923a1d9344 430 SUPERFAMILY SSF56176 348 423 4.64E-18 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS22360 30cdd4bcdc3c5f43c8758a923a1d9344 430 Gene3D G3DSA:3.30.465.10 321 420 9.5E-21 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS22360 30cdd4bcdc3c5f43c8758a923a1d9344 430 Gene3D G3DSA:3.10.580.10 198 320 5.5E-14 T 09-03-2017 NA29_RS22360 30cdd4bcdc3c5f43c8758a923a1d9344 430 Pfam PF01595 Domain of unknown function DUF21 13 184 2.0E-42 T 09-03-2017 IPR002550 Domain of unknown function DUF21 NA29_RS22360 30cdd4bcdc3c5f43c8758a923a1d9344 430 SMART SM01091 345 423 1.2E-17 T 09-03-2017 IPR005170 Transporter-associated domain NA29_RS22360 30cdd4bcdc3c5f43c8758a923a1d9344 430 SUPERFAMILY SSF54631 196 332 1.64E-24 T 09-03-2017 NA29_RS22360 30cdd4bcdc3c5f43c8758a923a1d9344 430 Pfam PF00571 CBS domain 282 328 2.7E-5 T 09-03-2017 IPR000644 CBS domain NA29_RS17875 84616432ed642de177589d0918aaa979 235 Pfam PF04402 Protein of unknown function (DUF541) 38 231 1.9E-30 T 09-03-2017 IPR007497 Protein of unknown function DUF541 NA29_RS19325 b15ad1ff2a2be767454a75f36312344a 259 Pfam PF12833 Helix-turn-helix domain 179 255 1.0E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS19325 b15ad1ff2a2be767454a75f36312344a 259 SMART SM00342 173 255 1.6E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS19325 b15ad1ff2a2be767454a75f36312344a 259 SUPERFAMILY SSF51182 13 207 8.45E-12 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS19325 b15ad1ff2a2be767454a75f36312344a 259 Gene3D G3DSA:1.10.10.60 213 254 2.9E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS19325 b15ad1ff2a2be767454a75f36312344a 259 SUPERFAMILY SSF46689 212 255 1.51E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS19325 b15ad1ff2a2be767454a75f36312344a 259 Gene3D G3DSA:1.10.10.60 154 209 1.2E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS19325 b15ad1ff2a2be767454a75f36312344a 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 255 4.5E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS19325 b15ad1ff2a2be767454a75f36312344a 259 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 239 4.5E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS19325 b15ad1ff2a2be767454a75f36312344a 259 Gene3D G3DSA:2.60.120.10 13 89 5.9E-9 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS21885 2f21612dd88adc061617adb4f883d911 640 SUPERFAMILY SSF52540 75 370 2.65E-17 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS21885 2f21612dd88adc061617adb4f883d911 640 Pfam PF08298 PrkA AAA domain 20 376 6.0E-172 T 09-03-2017 IPR013153 PrkA AAA domain NA29_RS21885 2f21612dd88adc061617adb4f883d911 640 Gene3D G3DSA:3.40.50.300 239 325 9.1E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS21885 2f21612dd88adc061617adb4f883d911 640 Gene3D G3DSA:3.40.50.300 75 154 9.1E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS21885 2f21612dd88adc061617adb4f883d911 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 6.2E-71 T 09-03-2017 IPR010650 PrkA C-terminal domain NA29_RS21885 2f21612dd88adc061617adb4f883d911 640 SMART SM00763 19 376 4.6E-209 T 09-03-2017 IPR013153 PrkA AAA domain NA29_RS21885 2f21612dd88adc061617adb4f883d911 640 PIRSF PIRSF000549 1 640 3.7E-283 T 09-03-2017 IPR016230 Serine-protein kinase, PrkA GO:0004672 NA29_RS02835 e5db0a810eb21489062d5ba4d37fd617 210 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 15 206 2.1E-52 T 09-03-2017 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 NA29_RS02835 e5db0a810eb21489062d5ba4d37fd617 210 SUPERFAMILY SSF159709 21 209 1.96E-48 T 09-03-2017 NA29_RS02835 e5db0a810eb21489062d5ba4d37fd617 210 PIRSF PIRSF020680 6 210 7.0E-57 T 09-03-2017 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 NA29_RS02835 e5db0a810eb21489062d5ba4d37fd617 210 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 14 208 4.3E-60 T 09-03-2017 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 NA29_RS23965 d843150dfe45dd10eaf174f2bd3c7f60 329 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 171 2.1E-18 T 09-03-2017 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 NA29_RS23965 d843150dfe45dd10eaf174f2bd3c7f60 329 SUPERFAMILY SSF51735 1 187 3.44E-16 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS23965 d843150dfe45dd10eaf174f2bd3c7f60 329 Gene3D G3DSA:1.10.1040.10 199 318 1.7E-27 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS23965 d843150dfe45dd10eaf174f2bd3c7f60 329 Gene3D G3DSA:3.40.50.720 1 197 6.5E-47 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS23965 d843150dfe45dd10eaf174f2bd3c7f60 329 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 199 318 1.4E-25 T 09-03-2017 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 NA29_RS23965 d843150dfe45dd10eaf174f2bd3c7f60 329 SUPERFAMILY SSF48179 199 318 1.12E-28 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS18620 ff0808e4e38c332497a7ebff73135b63 378 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 63 74 2.0E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS18620 ff0808e4e38c332497a7ebff73135b63 378 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 323 340 2.0E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS18620 ff0808e4e38c332497a7ebff73135b63 378 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 200 212 2.0E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS18620 ff0808e4e38c332497a7ebff73135b63 378 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 107 117 2.0E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS18620 ff0808e4e38c332497a7ebff73135b63 378 PRINTS PR00184 Neisseria sp. porin signature 65 90 4.2E-6 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS18620 ff0808e4e38c332497a7ebff73135b63 378 PRINTS PR00184 Neisseria sp. porin signature 320 344 4.2E-6 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS18620 ff0808e4e38c332497a7ebff73135b63 378 Pfam PF13609 Gram-negative porin 17 348 7.1E-42 T 09-03-2017 NA29_RS18620 ff0808e4e38c332497a7ebff73135b63 378 Gene3D G3DSA:2.40.160.10 27 378 2.1E-77 T 09-03-2017 IPR023614 Porin domain NA29_RS18620 ff0808e4e38c332497a7ebff73135b63 378 SUPERFAMILY SSF56935 27 378 1.53E-69 T 09-03-2017 NA29_RS15775 f9a758567f035f67971628f6e62b394a 240 Gene3D G3DSA:3.40.50.1000 103 235 7.3E-42 T 09-03-2017 IPR023214 HAD-like domain NA29_RS15775 f9a758567f035f67971628f6e62b394a 240 Gene3D G3DSA:3.40.50.1000 18 39 7.3E-42 T 09-03-2017 IPR023214 HAD-like domain NA29_RS15775 f9a758567f035f67971628f6e62b394a 240 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 26 227 2.1E-52 T 09-03-2017 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 NA29_RS15775 f9a758567f035f67971628f6e62b394a 240 Gene3D G3DSA:1.10.150.240 40 102 3.9E-7 T 09-03-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 NA29_RS15775 f9a758567f035f67971628f6e62b394a 240 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 114 204 3.9E-8 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS15775 f9a758567f035f67971628f6e62b394a 240 SUPERFAMILY SSF56784 23 235 2.44E-57 T 09-03-2017 IPR023214 HAD-like domain NA29_RS15775 f9a758567f035f67971628f6e62b394a 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 119 132 7.3E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS15775 f9a758567f035f67971628f6e62b394a 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 7.3E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS15775 f9a758567f035f67971628f6e62b394a 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 168 188 7.3E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS15775 f9a758567f035f67971628f6e62b394a 240 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 23 34 7.3E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS15775 f9a758567f035f67971628f6e62b394a 240 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 121 200 1.4E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS15775 f9a758567f035f67971628f6e62b394a 240 Pfam PF13419 Haloacid dehalogenase-like hydrolase 26 205 8.9E-30 T 09-03-2017 IPR023214 HAD-like domain NA29_RS21145 79eb0a877411f6267db4f9c353ae5c84 67 SUPERFAMILY SSF50249 1 66 4.71E-25 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS21145 79eb0a877411f6267db4f9c353ae5c84 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 09-03-2017 IPR019844 Cold-shock conserved site NA29_RS21145 79eb0a877411f6267db4f9c353ae5c84 67 Gene3D G3DSA:2.40.50.140 1 65 2.3E-30 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS21145 79eb0a877411f6267db4f9c353ae5c84 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.4E-29 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS21145 79eb0a877411f6267db4f9c353ae5c84 67 PIRSF PIRSF002599 1 67 5.7E-24 T 09-03-2017 IPR012156 Cold shock, CspA GO:0003676 NA29_RS21145 79eb0a877411f6267db4f9c353ae5c84 67 SMART SM00357 3 67 1.1E-27 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 NA29_RS21145 79eb0a877411f6267db4f9c353ae5c84 67 PRINTS PR00050 Cold shock protein signature 4 19 1.2E-15 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS21145 79eb0a877411f6267db4f9c353ae5c84 67 PRINTS PR00050 Cold shock protein signature 25 34 1.2E-15 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS21145 79eb0a877411f6267db4f9c353ae5c84 67 PRINTS PR00050 Cold shock protein signature 40 58 1.2E-15 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS18825 7998481f0460566c713ded7014d85d5d 236 Gene3D G3DSA:2.60.130.10 11 235 8.5E-72 T 09-03-2017 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 NA29_RS18825 7998481f0460566c713ded7014d85d5d 236 SUPERFAMILY SSF49482 7 235 1.28E-70 T 09-03-2017 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 NA29_RS18825 7998481f0460566c713ded7014d85d5d 236 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 80 108 - T 09-03-2017 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 NA29_RS18825 7998481f0460566c713ded7014d85d5d 236 Pfam PF00775 Dioxygenase 47 228 3.7E-59 T 09-03-2017 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 NA29_RS18825 7998481f0460566c713ded7014d85d5d 236 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 16 235 1.5E-103 T 09-03-2017 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 NA29_RS18825 7998481f0460566c713ded7014d85d5d 236 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 10 41 3.2E-12 T 09-03-2017 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 NA29_RS23590 7d69373684b99e95bbaff8a3e1b29538 419 Gene3D G3DSA:1.20.1250.20 15 187 5.8E-32 T 09-03-2017 NA29_RS23590 7d69373684b99e95bbaff8a3e1b29538 419 Gene3D G3DSA:1.20.1250.20 227 409 5.9E-22 T 09-03-2017 NA29_RS23590 7d69373684b99e95bbaff8a3e1b29538 419 SUPERFAMILY SSF103473 12 412 9.16E-74 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS23590 7d69373684b99e95bbaff8a3e1b29538 419 Pfam PF07690 Major Facilitator Superfamily 23 368 5.4E-39 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS23590 7d69373684b99e95bbaff8a3e1b29538 419 ProSitePatterns PS00216 Sugar transport proteins signature 1. 283 300 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS10330 85fac960fe6098cc1c207393cd2f3b51 274 SUPERFAMILY SSF48498 91 221 1.02E-37 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS10330 85fac960fe6098cc1c207393cd2f3b51 274 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 61 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NA29_RS10330 85fac960fe6098cc1c207393cd2f3b51 274 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 1.4E-14 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS10330 85fac960fe6098cc1c207393cd2f3b51 274 Gene3D G3DSA:1.10.357.10 9 217 5.9E-41 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS10330 85fac960fe6098cc1c207393cd2f3b51 274 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.6E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS10330 85fac960fe6098cc1c207393cd2f3b51 274 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.6E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS10330 85fac960fe6098cc1c207393cd2f3b51 274 SUPERFAMILY SSF46689 7 83 3.08E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS21325 3b50701d71fb13195aa3060669a63c0c 212 SUPERFAMILY SSF52218 1 171 1.53E-44 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS21325 3b50701d71fb13195aa3060669a63c0c 212 Pfam PF02525 Flavodoxin-like fold 1 161 5.3E-38 T 09-03-2017 IPR003680 Flavodoxin-like fold NA29_RS21325 3b50701d71fb13195aa3060669a63c0c 212 Gene3D G3DSA:3.40.50.360 1 168 2.7E-43 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS01630 dbfc5ee1cb9c4e5638b9d9ee86acfb00 489 SMART SM01060 13 395 2.6E-269 T 09-03-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS01630 dbfc5ee1cb9c4e5638b9d9ee86acfb00 489 SUPERFAMILY SSF56634 11 485 7.07E-197 T 09-03-2017 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS01630 dbfc5ee1cb9c4e5638b9d9ee86acfb00 489 Gene3D G3DSA:2.40.180.10 10 362 2.8E-169 T 09-03-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS01630 dbfc5ee1cb9c4e5638b9d9ee86acfb00 489 PIRSF PIRSF038928 2 489 2.4E-232 T 09-03-2017 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS01630 dbfc5ee1cb9c4e5638b9d9ee86acfb00 489 Pfam PF00199 Catalase 13 390 1.9E-182 T 09-03-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS01630 dbfc5ee1cb9c4e5638b9d9ee86acfb00 489 Pfam PF06628 Catalase-related immune-responsive 422 484 7.1E-16 T 09-03-2017 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS01630 dbfc5ee1cb9c4e5638b9d9ee86acfb00 489 ProSitePatterns PS00438 Catalase proximal active site signature. 49 65 - T 09-03-2017 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS01630 dbfc5ee1cb9c4e5638b9d9ee86acfb00 489 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 338 346 - T 09-03-2017 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS01630 dbfc5ee1cb9c4e5638b9d9ee86acfb00 489 PRINTS PR00067 Catalase signature 325 351 3.9E-67 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS01630 dbfc5ee1cb9c4e5638b9d9ee86acfb00 489 PRINTS PR00067 Catalase signature 88 106 3.9E-67 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS01630 dbfc5ee1cb9c4e5638b9d9ee86acfb00 489 PRINTS PR00067 Catalase signature 128 146 3.9E-67 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS01630 dbfc5ee1cb9c4e5638b9d9ee86acfb00 489 PRINTS PR00067 Catalase signature 293 320 3.9E-67 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS01630 dbfc5ee1cb9c4e5638b9d9ee86acfb00 489 PRINTS PR00067 Catalase signature 26 49 3.9E-67 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS01630 dbfc5ee1cb9c4e5638b9d9ee86acfb00 489 PRINTS PR00067 Catalase signature 109 126 3.9E-67 T 09-03-2017 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS18020 22f04457e2942cf4992f0bda86f55c29 313 SUPERFAMILY SSF46785 2 85 1.2E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18020 22f04457e2942cf4992f0bda86f55c29 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.1E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18020 22f04457e2942cf4992f0bda86f55c29 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.1E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18020 22f04457e2942cf4992f0bda86f55c29 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.1E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18020 22f04457e2942cf4992f0bda86f55c29 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 64 9.8E-14 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18020 22f04457e2942cf4992f0bda86f55c29 313 Gene3D G3DSA:3.40.190.10 91 179 6.9E-21 T 09-03-2017 NA29_RS18020 22f04457e2942cf4992f0bda86f55c29 313 Pfam PF03466 LysR substrate binding domain 89 263 2.4E-40 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS18020 22f04457e2942cf4992f0bda86f55c29 313 Gene3D G3DSA:3.40.190.10 180 261 2.3E-27 T 09-03-2017 NA29_RS18020 22f04457e2942cf4992f0bda86f55c29 313 Gene3D G3DSA:1.10.10.10 1 81 6.1E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18020 22f04457e2942cf4992f0bda86f55c29 313 SUPERFAMILY SSF53850 91 299 2.17E-40 T 09-03-2017 NA29_RS21760 73d85981b034c81e4c56daadccc08395 324 Gene3D G3DSA:1.10.10.10 1 84 3.5E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21760 73d85981b034c81e4c56daadccc08395 324 Gene3D G3DSA:3.40.190.10 85 200 1.0E-8 T 09-03-2017 NA29_RS21760 73d85981b034c81e4c56daadccc08395 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.4E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21760 73d85981b034c81e4c56daadccc08395 324 SUPERFAMILY SSF53850 98 293 9.23E-21 T 09-03-2017 NA29_RS21760 73d85981b034c81e4c56daadccc08395 324 Pfam PF03466 LysR substrate binding domain 109 293 1.9E-17 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS21760 73d85981b034c81e4c56daadccc08395 324 SUPERFAMILY SSF46785 2 86 3.97E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21760 73d85981b034c81e4c56daadccc08395 324 Gene3D G3DSA:3.40.190.10 201 250 6.6E-8 T 09-03-2017 NA29_RS06315 dfdf6ad918e76ea32c83ff89772bec55 162 SUPERFAMILY SSF46785 2 62 4.12E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06315 dfdf6ad918e76ea32c83ff89772bec55 162 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 6.0E-26 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS06315 dfdf6ad918e76ea32c83ff89772bec55 162 Gene3D G3DSA:3.30.70.920 56 140 1.5E-32 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS06315 dfdf6ad918e76ea32c83ff89772bec55 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 8.6E-16 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS06315 dfdf6ad918e76ea32c83ff89772bec55 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 8.6E-16 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS06315 dfdf6ad918e76ea32c83ff89772bec55 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 8.6E-16 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS06315 dfdf6ad918e76ea32c83ff89772bec55 162 SUPERFAMILY SSF54909 63 152 9.79E-24 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS06315 dfdf6ad918e76ea32c83ff89772bec55 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 09-03-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NA29_RS06315 dfdf6ad918e76ea32c83ff89772bec55 162 Gene3D G3DSA:1.10.10.10 1 52 4.5E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06315 dfdf6ad918e76ea32c83ff89772bec55 162 SMART SM00344 3 112 3.4E-51 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NA29_RS06315 dfdf6ad918e76ea32c83ff89772bec55 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 2.6E-20 T 09-03-2017 NA29_RS20660 64880aa9ba697379a73b37d1bfce093a 415 SUPERFAMILY SSF56436 181 414 1.04E-65 T 09-03-2017 IPR016187 C-type lectin fold NA29_RS20660 64880aa9ba697379a73b37d1bfce093a 415 Pfam PF03781 Sulfatase-modifying factor enzyme 1 340 412 6.3E-5 T 09-03-2017 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 NA29_RS20660 64880aa9ba697379a73b37d1bfce093a 415 Pfam PF03781 Sulfatase-modifying factor enzyme 1 189 329 3.4E-27 T 09-03-2017 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 NA29_RS20660 64880aa9ba697379a73b37d1bfce093a 415 Pfam PF12867 DinB superfamily 12 152 2.4E-14 T 09-03-2017 IPR024775 DinB-like domain NA29_RS20660 64880aa9ba697379a73b37d1bfce093a 415 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 9 412 9.0E-161 T 09-03-2017 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 NA29_RS20660 64880aa9ba697379a73b37d1bfce093a 415 SUPERFAMILY SSF109854 4 131 5.04E-8 T 09-03-2017 NA29_RS20660 64880aa9ba697379a73b37d1bfce093a 415 Gene3D G3DSA:3.90.1580.10 174 414 1.8E-54 T 09-03-2017 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 NA29_RS22955 a65dc16ed946335c8242f2fc227a1266 236 Pfam PF10531 SLBB domain 120 171 2.6E-8 T 09-03-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS22955 a65dc16ed946335c8242f2fc227a1266 236 Gene3D G3DSA:3.30.1950.10 46 112 1.5E-8 T 09-03-2017 NA29_RS22955 a65dc16ed946335c8242f2fc227a1266 236 Gene3D G3DSA:3.10.560.10 113 202 7.8E-20 T 09-03-2017 NA29_RS22955 a65dc16ed946335c8242f2fc227a1266 236 Pfam PF02563 Polysaccharide biosynthesis/export protein 37 107 6.1E-10 T 09-03-2017 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 NA29_RS15630 fe55be2627ec64b33b78405e348c21a8 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 2.6E-48 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 NA29_RS15630 fe55be2627ec64b33b78405e348c21a8 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.6E-48 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 NA29_RS15630 fe55be2627ec64b33b78405e348c21a8 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 2.6E-48 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 NA29_RS15630 fe55be2627ec64b33b78405e348c21a8 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.6E-48 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 NA29_RS15630 fe55be2627ec64b33b78405e348c21a8 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 2.6E-48 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 NA29_RS15630 fe55be2627ec64b33b78405e348c21a8 264 SUPERFAMILY SSF55831 1 264 6.41E-131 T 09-03-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 NA29_RS15630 fe55be2627ec64b33b78405e348c21a8 264 Gene3D G3DSA:3.30.572.10 1 264 1.1E-135 T 09-03-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 NA29_RS15630 fe55be2627ec64b33b78405e348c21a8 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.403 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 NA29_RS15630 fe55be2627ec64b33b78405e348c21a8 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 09-03-2017 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 NA29_RS15630 fe55be2627ec64b33b78405e348c21a8 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 1.3E-95 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 NA29_RS15630 fe55be2627ec64b33b78405e348c21a8 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 2.1E-42 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 NA29_RS15630 fe55be2627ec64b33b78405e348c21a8 264 Pfam PF00303 Thymidylate synthase 2 264 3.8E-124 T 09-03-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 NA29_RS08905 d2296b2200d04112607ca55071d793ab 68 SUPERFAMILY SSF63562 1 64 6.28E-22 T 09-03-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 NA29_RS08905 d2296b2200d04112607ca55071d793ab 68 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 16.837 T 09-03-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS08905 d2296b2200d04112607ca55071d793ab 68 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 2.2E-19 T 09-03-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 NA29_RS08905 d2296b2200d04112607ca55071d793ab 68 SMART SM01409 8 60 8.8E-17 T 09-03-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 NA29_RS08905 d2296b2200d04112607ca55071d793ab 68 Pfam PF01192 RNA polymerase Rpb6 8 59 1.3E-16 T 09-03-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 NA29_RS08905 d2296b2200d04112607ca55071d793ab 68 Gene3D G3DSA:3.90.940.10 1 64 3.1E-13 T 09-03-2017 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 NA29_RS15245 27affb6f7b2e539a277ea3bf06c0bccd 359 PIRSF PIRSF015283 2 348 1.9E-100 T 09-03-2017 IPR016631 Regulatory, RpfE NA29_RS14580 d2470b44a18ca9a307b36ef6b1bcd20f 223 Pfam PF00877 NlpC/P60 family 93 200 6.2E-30 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain NA29_RS14580 d2470b44a18ca9a307b36ef6b1bcd20f 223 Gene3D G3DSA:3.90.1720.10 77 203 5.0E-45 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain NA29_RS14580 d2470b44a18ca9a307b36ef6b1bcd20f 223 SUPERFAMILY SSF54001 74 201 7.11E-41 T 09-03-2017 NA29_RS20825 798eef6041b33adaeb7b9ce2547726b7 261 SUPERFAMILY SSF47413 4 63 2.31E-14 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS20825 798eef6041b33adaeb7b9ce2547726b7 261 Gene3D G3DSA:1.10.260.40 6 63 2.2E-14 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS20825 798eef6041b33adaeb7b9ce2547726b7 261 Pfam PF13560 Helix-turn-helix domain 5 67 1.2E-11 T 09-03-2017 NA29_RS20825 798eef6041b33adaeb7b9ce2547726b7 261 SMART SM00530 9 64 1.5E-9 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS20515 37f61baa8af7f07980e35d5a282a5add 242 Pfam PF00005 ABC transporter 20 168 2.2E-36 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS20515 37f61baa8af7f07980e35d5a282a5add 242 SMART SM00382 29 216 3.1E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS20515 37f61baa8af7f07980e35d5a282a5add 242 SUPERFAMILY SSF52540 4 236 1.45E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20515 37f61baa8af7f07980e35d5a282a5add 242 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS20515 37f61baa8af7f07980e35d5a282a5add 242 Gene3D G3DSA:3.40.50.300 4 238 9.3E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20515 37f61baa8af7f07980e35d5a282a5add 242 PIRSF PIRSF039085 1 242 4.3E-102 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 NA29_RS01545 be3ee74f144ae6b9fbbc86664368eecd 318 Pfam PF01171 PP-loop family 57 219 7.2E-16 T 09-03-2017 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 NA29_RS01545 be3ee74f144ae6b9fbbc86664368eecd 318 SUPERFAMILY SSF52402 32 251 2.03E-54 T 09-03-2017 NA29_RS01545 be3ee74f144ae6b9fbbc86664368eecd 318 PIRSF PIRSF004976 9 287 6.0E-71 T 09-03-2017 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 NA29_RS01545 be3ee74f144ae6b9fbbc86664368eecd 318 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 23 286 56.486 T 09-03-2017 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 NA29_RS01545 be3ee74f144ae6b9fbbc86664368eecd 318 Gene3D G3DSA:3.40.50.620 43 222 4.8E-22 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS06440 1c8bf69d339e847099c8c165fbf14360 382 Pfam PF01841 Transglutaminase-like superfamily 170 289 6.0E-25 T 09-03-2017 IPR002931 Transglutaminase-like NA29_RS06440 1c8bf69d339e847099c8c165fbf14360 382 SUPERFAMILY SSF54001 163 290 2.1E-24 T 09-03-2017 NA29_RS06440 1c8bf69d339e847099c8c165fbf14360 382 Gene3D G3DSA:3.90.260.10 222 330 1.6E-5 T 09-03-2017 IPR002931 Transglutaminase-like NA29_RS06440 1c8bf69d339e847099c8c165fbf14360 382 SMART SM00460 217 291 1.3E-12 T 09-03-2017 IPR002931 Transglutaminase-like NA29_RS14890 2effd2d6913a96177a87a6db3379c81c 228 Pfam PF02390 Putative methyltransferase 57 220 1.1E-12 T 09-03-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 NA29_RS14890 2effd2d6913a96177a87a6db3379c81c 228 SUPERFAMILY SSF53335 53 221 1.44E-15 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS14890 2effd2d6913a96177a87a6db3379c81c 228 Gene3D G3DSA:3.40.50.150 24 73 2.1E-6 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS14890 2effd2d6913a96177a87a6db3379c81c 228 Gene3D G3DSA:3.40.50.150 74 118 1.3E-6 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS04635 bb66af30aed5e862323733ba7b7268cc 177 Pfam PF01202 Shikimate kinase 9 159 9.6E-16 T 09-03-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 NA29_RS04635 bb66af30aed5e862323733ba7b7268cc 177 Gene3D G3DSA:3.40.50.300 1 160 7.4E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS04635 bb66af30aed5e862323733ba7b7268cc 177 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 3 139 6.3E-48 T 09-03-2017 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 NA29_RS04635 bb66af30aed5e862323733ba7b7268cc 177 SUPERFAMILY SSF52540 1 160 1.07E-24 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20565 006c874ee79417781df73c1394a97b2e 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 250 1.6E-57 T 09-03-2017 NA29_RS20565 006c874ee79417781df73c1394a97b2e 254 Gene3D G3DSA:3.40.50.720 3 251 5.3E-77 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS20565 006c874ee79417781df73c1394a97b2e 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 9.3E-4 T 09-03-2017 NA29_RS20565 006c874ee79417781df73c1394a97b2e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.6E-34 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20565 006c874ee79417781df73c1394a97b2e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.6E-34 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20565 006c874ee79417781df73c1394a97b2e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.6E-34 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20565 006c874ee79417781df73c1394a97b2e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.6E-34 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20565 006c874ee79417781df73c1394a97b2e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.6E-34 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20565 006c874ee79417781df73c1394a97b2e 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 2.6E-34 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20565 006c874ee79417781df73c1394a97b2e 254 SUPERFAMILY SSF51735 6 251 7.39E-77 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11405 3be09d91e31393eda717955bf53da54e 442 Gene3D G3DSA:3.50.50.60 187 265 1.9E-32 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS11405 3be09d91e31393eda717955bf53da54e 442 Gene3D G3DSA:3.50.50.60 359 412 1.9E-32 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS11405 3be09d91e31393eda717955bf53da54e 442 Gene3D G3DSA:3.50.50.60 35 134 1.9E-32 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS11405 3be09d91e31393eda717955bf53da54e 442 Pfam PF01266 FAD dependent oxidoreductase 44 395 2.0E-37 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS11405 3be09d91e31393eda717955bf53da54e 442 SUPERFAMILY SSF51905 359 414 5.61E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS11405 3be09d91e31393eda717955bf53da54e 442 SUPERFAMILY SSF51905 43 266 5.61E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS21310 ba64d13eddb6eb76bfbc2994c9bf4875 464 PIRSF PIRSF006060 6 462 2.8E-90 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NA29_RS21310 ba64d13eddb6eb76bfbc2994c9bf4875 464 Pfam PF13520 Amino acid permease 25 430 7.1E-62 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NA29_RS01895 78ab453b22f39e9d0144c125800d7486 315 SUPERFAMILY SSF51412 8 297 3.85E-62 T 09-03-2017 NA29_RS01895 78ab453b22f39e9d0144c125800d7486 315 Gene3D G3DSA:3.20.20.70 9 299 3.5E-49 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS01895 78ab453b22f39e9d0144c125800d7486 315 Pfam PF03060 Nitronate monooxygenase 79 304 1.8E-24 T 09-03-2017 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 NA29_RS02990 b3087cda03742a51ae92fcf9047c2e38 132 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 20 130 1.8E-31 T 09-03-2017 IPR006056 RidA family NA29_RS02990 b3087cda03742a51ae92fcf9047c2e38 132 Pfam PF01042 Endoribonuclease L-PSP 19 130 1.9E-33 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family NA29_RS02990 b3087cda03742a51ae92fcf9047c2e38 132 SUPERFAMILY SSF55298 10 131 2.83E-38 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS02990 b3087cda03742a51ae92fcf9047c2e38 132 Gene3D G3DSA:3.30.1330.40 8 130 1.8E-38 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS15330 dbd0a3b64ac62694206ab7075b32df7d 176 Gene3D G3DSA:1.10.287.110 5 77 1.2E-26 T 09-03-2017 IPR001623 DnaJ domain NA29_RS15330 dbd0a3b64ac62694206ab7075b32df7d 176 SUPERFAMILY SSF47144 82 173 1.07E-21 T 09-03-2017 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 NA29_RS15330 dbd0a3b64ac62694206ab7075b32df7d 176 SMART SM00271 6 71 2.7E-6 T 09-03-2017 IPR001623 DnaJ domain NA29_RS15330 dbd0a3b64ac62694206ab7075b32df7d 176 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 6 174 23.784 T 09-03-2017 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 Reactome: R-HSA-1268020 NA29_RS15330 dbd0a3b64ac62694206ab7075b32df7d 176 SUPERFAMILY SSF46565 7 79 2.22E-17 T 09-03-2017 IPR001623 DnaJ domain NA29_RS15330 dbd0a3b64ac62694206ab7075b32df7d 176 Gene3D G3DSA:1.20.1280.20 86 173 2.0E-25 T 09-03-2017 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 NA29_RS15330 dbd0a3b64ac62694206ab7075b32df7d 176 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 18 171 3.9E-32 T 09-03-2017 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 Reactome: R-HSA-1268020 NA29_RS15330 dbd0a3b64ac62694206ab7075b32df7d 176 Pfam PF07743 HSCB C-terminal oligomerisation domain 92 166 9.5E-18 T 09-03-2017 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020 NA29_RS21340 d90d7a411e476db00489b44adb7b8e27 300 SUPERFAMILY SSF47240 51 218 1.31E-17 T 09-03-2017 IPR009078 Ferritin-like superfamily NA29_RS13665 bfc2de7f985809521bc416fe271417be 116 Pfam PF11604 Copper binding periplasmic protein CusF 50 115 3.9E-20 T 09-03-2017 IPR021647 Copper binding periplasmic protein CusF NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 Pfam PF01297 Zinc-uptake complex component A periplasmic 32 297 1.6E-74 T 09-03-2017 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 Gene3D G3DSA:3.40.50.1980 178 299 4.3E-42 T 09-03-2017 NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 SUPERFAMILY SSF53807 25 299 2.31E-81 T 09-03-2017 NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 Gene3D G3DSA:3.40.50.1980 22 177 1.1E-46 T 09-03-2017 NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 PRINTS PR00691 Adhesin B signature 185 202 9.2E-30 T 09-03-2017 IPR006129 Adhesin B GO:0007155 NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 PRINTS PR00691 Adhesin B signature 277 295 9.2E-30 T 09-03-2017 IPR006129 Adhesin B GO:0007155 NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 PRINTS PR00691 Adhesin B signature 256 274 9.2E-30 T 09-03-2017 IPR006129 Adhesin B GO:0007155 NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 PRINTS PR00691 Adhesin B signature 127 146 9.2E-30 T 09-03-2017 IPR006129 Adhesin B GO:0007155 NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 PRINTS PR00691 Adhesin B signature 234 251 9.2E-30 T 09-03-2017 IPR006129 Adhesin B GO:0007155 NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 PRINTS PR00691 Adhesin B signature 54 72 9.2E-30 T 09-03-2017 IPR006129 Adhesin B GO:0007155 NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 PRINTS PR00691 Adhesin B signature 29 50 9.2E-30 T 09-03-2017 IPR006129 Adhesin B GO:0007155 NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 PRINTS PR00690 Adhesin family signature 264 283 2.2E-26 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 PRINTS PR00690 Adhesin family signature 29 47 2.2E-26 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 PRINTS PR00690 Adhesin family signature 238 256 2.2E-26 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 PRINTS PR00690 Adhesin family signature 185 206 2.2E-26 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 PRINTS PR00690 Adhesin family signature 60 73 2.2E-26 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 NA29_RS07675 1f3d3abd4e8f5318d4284ce01abf97f4 308 PRINTS PR00690 Adhesin family signature 73 90 2.2E-26 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 NA29_RS12955 935b268e1202a25558eb5602a3e7fffd 177 Gene3D G3DSA:2.60.120.480 6 160 3.2E-60 T 09-03-2017 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 NA29_RS12955 935b268e1202a25558eb5602a3e7fffd 177 SUPERFAMILY SSF51182 5 158 4.45E-58 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS12955 935b268e1202a25558eb5602a3e7fffd 177 Pfam PF04115 Ureidoglycolate lyase 6 156 5.9E-54 T 09-03-2017 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 NA29_RS12955 935b268e1202a25558eb5602a3e7fffd 177 Hamap MF_00616 Ureidoglycolate lyase [allA]. 4 164 41.017 T 09-03-2017 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 NA29_RS12955 935b268e1202a25558eb5602a3e7fffd 177 PIRSF PIRSF017306 5 163 1.2E-45 T 09-03-2017 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 NA29_RS07215 935b268e1202a25558eb5602a3e7fffd 177 Gene3D G3DSA:2.60.120.480 6 160 3.2E-60 T 09-03-2017 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 NA29_RS07215 935b268e1202a25558eb5602a3e7fffd 177 SUPERFAMILY SSF51182 5 158 4.45E-58 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS07215 935b268e1202a25558eb5602a3e7fffd 177 Pfam PF04115 Ureidoglycolate lyase 6 156 5.9E-54 T 09-03-2017 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 NA29_RS07215 935b268e1202a25558eb5602a3e7fffd 177 Hamap MF_00616 Ureidoglycolate lyase [allA]. 4 164 41.017 T 09-03-2017 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 NA29_RS07215 935b268e1202a25558eb5602a3e7fffd 177 PIRSF PIRSF017306 5 163 1.2E-45 T 09-03-2017 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 NA29_RS17585 ad7e3350f45b0c90de8106bbc0fef4d7 189 Pfam PF00692 dUTPase 81 185 9.4E-7 T 09-03-2017 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 NA29_RS17585 ad7e3350f45b0c90de8106bbc0fef4d7 189 SUPERFAMILY SSF51283 3 188 1.31E-52 T 09-03-2017 IPR029054 dUTPase-like NA29_RS17585 ad7e3350f45b0c90de8106bbc0fef4d7 189 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 189 28.602 T 09-03-2017 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 NA29_RS17585 ad7e3350f45b0c90de8106bbc0fef4d7 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 188 1.2E-49 T 09-03-2017 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 NA29_RS17585 ad7e3350f45b0c90de8106bbc0fef4d7 189 Gene3D G3DSA:2.70.40.10 3 188 4.3E-69 T 09-03-2017 IPR029054 dUTPase-like NA29_RS09515 6d51bdb2c8483ac547e5059ebbc53a0f 521 Pfam PF02743 Cache domain 68 239 2.7E-13 T 09-03-2017 IPR033479 Double Cache domain 1 NA29_RS09515 6d51bdb2c8483ac547e5059ebbc53a0f 521 Gene3D G3DSA:3.30.450.20 125 207 3.6E-8 T 09-03-2017 NA29_RS09515 6d51bdb2c8483ac547e5059ebbc53a0f 521 SMART SM00267 335 510 1.3E-58 T 09-03-2017 IPR000160 GGDEF domain NA29_RS09515 6d51bdb2c8483ac547e5059ebbc53a0f 521 SUPERFAMILY SSF55073 351 509 1.26E-45 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS09515 6d51bdb2c8483ac547e5059ebbc53a0f 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 344 510 6.4E-52 T 09-03-2017 IPR000160 GGDEF domain NA29_RS09515 6d51bdb2c8483ac547e5059ebbc53a0f 521 Gene3D G3DSA:3.30.70.270 348 510 1.5E-52 T 09-03-2017 NA29_RS09515 6d51bdb2c8483ac547e5059ebbc53a0f 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 347 506 1.6E-47 T 09-03-2017 IPR000160 GGDEF domain NA29_RS03315 c02849c06f5f0772b129d310ff9cac76 213 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 211 3.7E-77 T 09-03-2017 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 NA29_RS03315 c02849c06f5f0772b129d310ff9cac76 213 SUPERFAMILY SSF47616 81 210 5.26E-31 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS03315 c02849c06f5f0772b129d310ff9cac76 213 Pfam PF14497 Glutathione S-transferase, C-terminal domain 125 199 3.9E-6 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal NA29_RS03315 c02849c06f5f0772b129d310ff9cac76 213 Gene3D G3DSA:3.40.30.10 1 89 6.4E-25 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS03315 c02849c06f5f0772b129d310ff9cac76 213 SUPERFAMILY SSF52833 1 85 2.02E-20 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS03315 c02849c06f5f0772b129d310ff9cac76 213 Gene3D G3DSA:1.20.1050.10 90 210 5.9E-48 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS03315 c02849c06f5f0772b129d310ff9cac76 213 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 8.0E-13 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS18775 5e8442fc755beaaa75df6c99b927a799 584 Gene3D G3DSA:1.10.3080.10 18 429 2.9E-66 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 NA29_RS18775 5e8442fc755beaaa75df6c99b927a799 584 Pfam PF00571 CBS domain 443 498 1.6E-5 T 09-03-2017 IPR000644 CBS domain NA29_RS18775 5e8442fc755beaaa75df6c99b927a799 584 Pfam PF00571 CBS domain 517 561 6.5E-4 T 09-03-2017 IPR000644 CBS domain NA29_RS18775 5e8442fc755beaaa75df6c99b927a799 584 Gene3D G3DSA:3.10.580.10 437 566 1.5E-14 T 09-03-2017 NA29_RS18775 5e8442fc755beaaa75df6c99b927a799 584 SUPERFAMILY SSF54631 434 561 9.98E-17 T 09-03-2017 NA29_RS18775 5e8442fc755beaaa75df6c99b927a799 584 SUPERFAMILY SSF81340 15 431 4.84E-90 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 NA29_RS18775 5e8442fc755beaaa75df6c99b927a799 584 Pfam PF00654 Voltage gated chloride channel 75 409 1.4E-69 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS18775 5e8442fc755beaaa75df6c99b927a799 584 PRINTS PR00762 Chloride channel signature 378 397 6.4E-12 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS18775 5e8442fc755beaaa75df6c99b927a799 584 PRINTS PR00762 Chloride channel signature 169 188 6.4E-12 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS18775 5e8442fc755beaaa75df6c99b927a799 584 PRINTS PR00762 Chloride channel signature 360 376 6.4E-12 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS18775 5e8442fc755beaaa75df6c99b927a799 584 PRINTS PR00762 Chloride channel signature 118 137 6.4E-12 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS18775 5e8442fc755beaaa75df6c99b927a799 584 SMART SM00116 514 564 1.0E-4 T 09-03-2017 IPR000644 CBS domain NA29_RS18775 5e8442fc755beaaa75df6c99b927a799 584 SMART SM00116 450 500 25.0 T 09-03-2017 IPR000644 CBS domain NA29_RS19175 81ec47bb839f79a544f5e11eadbc32c1 392 SUPERFAMILY SSF47203 236 376 6.66E-13 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS19175 81ec47bb839f79a544f5e11eadbc32c1 392 Gene3D G3DSA:1.10.540.10 17 118 4.5E-30 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS19175 81ec47bb839f79a544f5e11eadbc32c1 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 27 95 2.6E-6 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS19175 81ec47bb839f79a544f5e11eadbc32c1 392 Gene3D G3DSA:1.20.140.10 214 391 3.4E-33 T 09-03-2017 NA29_RS19175 81ec47bb839f79a544f5e11eadbc32c1 392 PIRSF PIRSF016578 2 391 9.1E-92 T 09-03-2017 NA29_RS19175 81ec47bb839f79a544f5e11eadbc32c1 392 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 240 370 3.8E-26 T 09-03-2017 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain NA29_RS19175 81ec47bb839f79a544f5e11eadbc32c1 392 SUPERFAMILY SSF56645 20 216 1.14E-21 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NA29_RS19175 81ec47bb839f79a544f5e11eadbc32c1 392 Gene3D G3DSA:2.40.110.10 125 213 4.3E-19 T 09-03-2017 NA29_RS22815 45106ff99c7471a6ddd0887c7a2a6039 208 SUPERFAMILY SSF52507 18 201 5.89E-61 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 NA29_RS22815 45106ff99c7471a6ddd0887c7a2a6039 208 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 17 201 36.696 T 09-03-2017 IPR004507 Flavin prenyltransferase UbiX/Pad1 NA29_RS22815 45106ff99c7471a6ddd0887c7a2a6039 208 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 18 199 1.5E-73 T 09-03-2017 IPR004507 Flavin prenyltransferase UbiX/Pad1 NA29_RS22815 45106ff99c7471a6ddd0887c7a2a6039 208 Gene3D G3DSA:3.40.50.1950 18 201 6.0E-76 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 NA29_RS22815 45106ff99c7471a6ddd0887c7a2a6039 208 Pfam PF02441 Flavoprotein 18 142 8.9E-27 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 NA29_RS06600 82134c9b09370e01ada30e91446df80a 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 244 1.4E-5 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS06600 82134c9b09370e01ada30e91446df80a 256 SUPERFAMILY SSF52540 3 245 1.78E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06600 82134c9b09370e01ada30e91446df80a 256 Gene3D G3DSA:3.40.50.300 3 242 1.8E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06600 82134c9b09370e01ada30e91446df80a 256 Pfam PF00005 ABC transporter 23 175 3.5E-25 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS06600 82134c9b09370e01ada30e91446df80a 256 SMART SM00382 28 222 8.5E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS08045 0722928a7697e5842445e53d32eaead5 531 Gene3D G3DSA:1.10.287.950 282 487 3.2E-62 T 09-03-2017 NA29_RS08045 0722928a7697e5842445e53d32eaead5 531 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 514 9.7E-59 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS08045 0722928a7697e5842445e53d32eaead5 531 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 188 2.4E-20 T 09-03-2017 IPR024478 4HB MCP domain NA29_RS08045 0722928a7697e5842445e53d32eaead5 531 SMART SM00304 215 267 4.1E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS08045 0722928a7697e5842445e53d32eaead5 531 SUPERFAMILY SSF58104 235 516 1.57E-73 T 09-03-2017 NA29_RS08045 0722928a7697e5842445e53d32eaead5 531 Pfam PF00672 HAMP domain 196 262 1.3E-13 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS08045 0722928a7697e5842445e53d32eaead5 531 SMART SM00283 268 515 1.1E-88 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS08045 0722928a7697e5842445e53d32eaead5 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 4.5E-61 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS08045 0722928a7697e5842445e53d32eaead5 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 424 4.5E-61 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS08045 0722928a7697e5842445e53d32eaead5 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 472 4.5E-61 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS08045 0722928a7697e5842445e53d32eaead5 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 4.5E-61 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS08045 0722928a7697e5842445e53d32eaead5 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 289 318 4.5E-61 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS08045 0722928a7697e5842445e53d32eaead5 531 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 393 4.5E-61 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS22375 9046fa97fd022d35d4585c46a682dc3d 286 Pfam PF01478 Type IV leader peptidase family 137 243 1.8E-25 T 09-03-2017 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 NA29_RS22375 9046fa97fd022d35d4585c46a682dc3d 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 1.4E-21 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial NA29_RS22375 9046fa97fd022d35d4585c46a682dc3d 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 144 161 1.4E-21 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial NA29_RS22375 9046fa97fd022d35d4585c46a682dc3d 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 1.4E-21 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial NA29_RS22375 9046fa97fd022d35d4585c46a682dc3d 286 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 1.4E-21 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial NA29_RS11175 d3d3be8c8b8b542f188d6515749527c4 337 Gene3D G3DSA:3.40.50.720 10 319 1.7E-27 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11175 d3d3be8c8b8b542f188d6515749527c4 337 SUPERFAMILY SSF51735 11 321 1.54E-41 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11175 d3d3be8c8b8b542f188d6515749527c4 337 Pfam PF13460 NAD(P)H-binding 16 166 2.1E-12 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10300 e5e88a9fe26611f09f76a5aeca1e0c68 299 Gene3D G3DSA:2.50.20.10 224 288 3.9E-4 T 09-03-2017 NA29_RS10300 e5e88a9fe26611f09f76a5aeca1e0c68 299 Gene3D G3DSA:2.50.20.10 97 109 3.9E-4 T 09-03-2017 NA29_RS10300 e5e88a9fe26611f09f76a5aeca1e0c68 299 Pfam PF07608 Protein of unknown function (DUF1571) 98 299 6.1E-58 T 09-03-2017 IPR011465 Protein of unknown function DUF1571 NA29_RS05550 646f5ef13b7eafe7c14e25155d5f1fd9 64 Pfam PF10276 Zinc-finger domain 32 53 5.0E-7 T 09-03-2017 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS05550 646f5ef13b7eafe7c14e25155d5f1fd9 64 Gene3D G3DSA:2.60.260.40 6 61 6.6E-19 T 09-03-2017 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS00140 8ee7cb6010b8e68ddfa04e815bf95fc1 89 Pfam PF02583 Metal-sensitive transcriptional repressor 6 85 9.7E-21 T 09-03-2017 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 NA29_RS07635 822fc1f0d3f0a661fec085f06710b904 243 SMART SM01236 78 181 3.8E-24 T 09-03-2017 NA29_RS07635 822fc1f0d3f0a661fec085f06710b904 243 SUPERFAMILY SSF48613 10 226 6.83E-50 T 09-03-2017 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 NA29_RS07635 822fc1f0d3f0a661fec085f06710b904 243 Pfam PF14518 Iron-containing redox enzyme 44 212 1.6E-32 T 09-03-2017 IPR028201 PqqC-like protein NA29_RS07635 822fc1f0d3f0a661fec085f06710b904 243 Gene3D G3DSA:1.20.910.10 2 238 7.2E-61 T 09-03-2017 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 NA29_RS23645 64ee55e28fea12cc21c51b6422b5b688 378 SUPERFAMILY SSF109604 19 373 4.52E-92 T 09-03-2017 NA29_RS23645 64ee55e28fea12cc21c51b6422b5b688 378 Gene3D G3DSA:1.10.3210.10 274 373 1.7E-82 T 09-03-2017 IPR006674 HD domain NA29_RS23645 64ee55e28fea12cc21c51b6422b5b688 378 Gene3D G3DSA:1.10.3210.10 30 217 1.7E-82 T 09-03-2017 IPR006674 HD domain NA29_RS23645 64ee55e28fea12cc21c51b6422b5b688 378 Pfam PF13286 Phosphohydrolase-associated domain 284 370 1.2E-27 T 09-03-2017 IPR026875 Phosphohydrolase-associated domain NA29_RS23645 64ee55e28fea12cc21c51b6422b5b688 378 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 165 2.4E-58 T 09-03-2017 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 NA29_RS23645 64ee55e28fea12cc21c51b6422b5b688 378 Pfam PF01966 HD domain 68 198 2.5E-14 T 09-03-2017 IPR006674 HD domain NA29_RS23645 64ee55e28fea12cc21c51b6422b5b688 378 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 8 372 38.518 T 09-03-2017 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 NA29_RS23645 64ee55e28fea12cc21c51b6422b5b688 378 SMART SM00471 64 208 5.8E-11 T 09-03-2017 IPR003607 HD/PDEase domain NA29_RS21930 c5f9dc08d07ff1456d47247b58dab3a5 515 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 67 462 8.9E-102 T 09-03-2017 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 NA29_RS21930 c5f9dc08d07ff1456d47247b58dab3a5 515 Gene3D G3DSA:3.60.110.10 223 480 4.4E-26 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NA29_RS21930 c5f9dc08d07ff1456d47247b58dab3a5 515 Pfam PF00795 Carbon-nitrogen hydrolase 250 484 8.6E-24 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NA29_RS21930 c5f9dc08d07ff1456d47247b58dab3a5 515 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 13 500 22.559 T 09-03-2017 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 NA29_RS21930 c5f9dc08d07ff1456d47247b58dab3a5 515 SUPERFAMILY SSF56317 225 494 1.22E-38 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NA29_RS14250 261332bb883846f5c3b3fee0f840df54 265 SMART SM00079 38 258 4.1E-4 T 09-03-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 NA29_RS14250 261332bb883846f5c3b3fee0f840df54 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 258 1.1E-69 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS14250 261332bb883846f5c3b3fee0f840df54 265 SUPERFAMILY SSF53850 11 259 2.85E-74 T 09-03-2017 NA29_RS14250 261332bb883846f5c3b3fee0f840df54 265 Gene3D G3DSA:3.40.190.10 116 206 3.5E-23 T 09-03-2017 NA29_RS14250 261332bb883846f5c3b3fee0f840df54 265 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 61 74 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 NA29_RS14250 261332bb883846f5c3b3fee0f840df54 265 SMART SM00062 38 259 5.0E-77 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS14250 261332bb883846f5c3b3fee0f840df54 265 Gene3D G3DSA:3.40.190.10 35 115 3.2E-48 T 09-03-2017 NA29_RS14250 261332bb883846f5c3b3fee0f840df54 265 Gene3D G3DSA:3.40.190.10 218 260 3.2E-48 T 09-03-2017 NA29_RS08590 3f8e044e9917945f682140e8ee7baae5 719 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 78 717 5.3E-119 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NA29_RS08590 3f8e044e9917945f682140e8ee7baae5 719 Gene3D G3DSA:2.40.170.20 189 719 7.8E-156 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS08590 3f8e044e9917945f682140e8ee7baae5 719 SUPERFAMILY SSF56935 57 719 5.5E-142 T 09-03-2017 NA29_RS08590 3f8e044e9917945f682140e8ee7baae5 719 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 174 1.3E-21 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS08590 3f8e044e9917945f682140e8ee7baae5 719 Gene3D G3DSA:2.170.130.10 57 182 3.0E-38 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS08590 3f8e044e9917945f682140e8ee7baae5 719 Pfam PF00593 TonB dependent receptor 484 717 3.8E-30 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS21080 e3a8ea2ac927207f245bc04ff781e5ca 441 Gene3D G3DSA:1.20.1250.20 17 199 2.1E-26 T 09-03-2017 NA29_RS21080 e3a8ea2ac927207f245bc04ff781e5ca 441 Gene3D G3DSA:1.20.1250.20 222 414 7.8E-16 T 09-03-2017 NA29_RS21080 e3a8ea2ac927207f245bc04ff781e5ca 441 Pfam PF07690 Major Facilitator Superfamily 26 273 3.5E-24 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS21080 e3a8ea2ac927207f245bc04ff781e5ca 441 SUPERFAMILY SSF103473 8 418 1.96E-49 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS21080 e3a8ea2ac927207f245bc04ff781e5ca 441 TIGRFAM TIGR04259 oxa_formateAnti: oxalate/formate antiporter 17 420 1.9E-191 T 09-03-2017 IPR026355 Oxalate/formate antiporter GO:0005215|GO:0006810|GO:0016021 NA29_RS06940 ef4786ddc151f2e319003fdf8de02d69 300 Gene3D G3DSA:3.40.190.10 36 123 7.6E-28 T 09-03-2017 NA29_RS06940 ef4786ddc151f2e319003fdf8de02d69 300 Gene3D G3DSA:3.40.190.10 232 273 7.6E-28 T 09-03-2017 NA29_RS06940 ef4786ddc151f2e319003fdf8de02d69 300 SMART SM00062 39 271 3.1E-47 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS06940 ef4786ddc151f2e319003fdf8de02d69 300 Gene3D G3DSA:3.40.190.10 124 231 6.5E-21 T 09-03-2017 NA29_RS06940 ef4786ddc151f2e319003fdf8de02d69 300 SUPERFAMILY SSF53850 1 272 3.73E-60 T 09-03-2017 NA29_RS06940 ef4786ddc151f2e319003fdf8de02d69 300 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 269 2.8E-45 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS20910 25615d47f8af2ae8be0863240fe7e988 81 Pfam PF05768 Glutaredoxin-like domain (DUF836) 7 75 7.0E-16 T 09-03-2017 IPR008554 Glutaredoxin-like NA29_RS20910 25615d47f8af2ae8be0863240fe7e988 81 SUPERFAMILY SSF52833 4 76 1.05E-15 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS20910 25615d47f8af2ae8be0863240fe7e988 81 Gene3D G3DSA:3.40.30.10 5 76 4.0E-23 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS17060 d34aec44903e49cfec19010e45c1e4fa 444 SUPERFAMILY SSF48256 34 421 1.09E-44 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS17060 d34aec44903e49cfec19010e45c1e4fa 444 Pfam PF12728 Helix-turn-helix domain 7 58 1.3E-6 T 09-03-2017 NA29_RS17060 d34aec44903e49cfec19010e45c1e4fa 444 Gene3D G3DSA:1.10.230.10 297 347 1.4E-5 T 09-03-2017 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 NA29_RS17060 d34aec44903e49cfec19010e45c1e4fa 444 Gene3D G3DSA:1.10.580.10 77 287 3.2E-21 T 09-03-2017 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 NA29_RS17060 d34aec44903e49cfec19010e45c1e4fa 444 Gene3D G3DSA:1.10.1660.10 8 61 3.9E-4 T 09-03-2017 NA29_RS17060 d34aec44903e49cfec19010e45c1e4fa 444 Pfam PF00285 Citrate synthase, C-terminal domain 77 418 4.2E-45 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS07630 d86bb588c93fa82a5c2f48ad6ea95fbe 443 Gene3D G3DSA:1.20.1250.20 226 398 6.4E-21 T 09-03-2017 NA29_RS07630 d86bb588c93fa82a5c2f48ad6ea95fbe 443 Gene3D G3DSA:1.20.1250.20 13 195 8.3E-29 T 09-03-2017 NA29_RS07630 d86bb588c93fa82a5c2f48ad6ea95fbe 443 SUPERFAMILY SSF103473 8 413 7.19E-74 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS07630 d86bb588c93fa82a5c2f48ad6ea95fbe 443 Pfam PF07690 Major Facilitator Superfamily 19 313 5.9E-35 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS14555 35f3bcddc2897ec96be83192b2c3706c 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 105 5.4E-40 T 09-03-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NA29_RS14555 35f3bcddc2897ec96be83192b2c3706c 108 Gene3D G3DSA:3.40.30.10 2 106 2.0E-41 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS14555 35f3bcddc2897ec96be83192b2c3706c 108 PRINTS PR00421 Thioredoxin family signature 72 83 9.6E-10 T 09-03-2017 NA29_RS14555 35f3bcddc2897ec96be83192b2c3706c 108 PRINTS PR00421 Thioredoxin family signature 24 32 9.6E-10 T 09-03-2017 NA29_RS14555 35f3bcddc2897ec96be83192b2c3706c 108 PRINTS PR00421 Thioredoxin family signature 32 41 9.6E-10 T 09-03-2017 NA29_RS14555 35f3bcddc2897ec96be83192b2c3706c 108 SUPERFAMILY SSF52833 3 107 1.74E-41 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS14555 35f3bcddc2897ec96be83192b2c3706c 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 NA29_RS14555 35f3bcddc2897ec96be83192b2c3706c 108 Pfam PF00085 Thioredoxin 5 105 7.8E-35 T 09-03-2017 IPR013766 Thioredoxin domain GO:0045454 NA29_RS14555 35f3bcddc2897ec96be83192b2c3706c 108 PIRSF PIRSF000077 2 108 4.1E-44 T 09-03-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 NA29_RS06515 78eae0d2e16b40fbdf9ea00b95c97c09 160 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 7.7E-59 T 09-03-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 NA29_RS06515 78eae0d2e16b40fbdf9ea00b95c97c09 160 Pfam PF03477 ATP cone domain 50 136 6.5E-12 T 09-03-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 NA29_RS06515 78eae0d2e16b40fbdf9ea00b95c97c09 160 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 155 85.698 T 09-03-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 NA29_RS11040 5629e1f83fe3014cf4548ae4fc57e293 326 Gene3D G3DSA:3.20.20.70 15 307 2.2E-81 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS11040 5629e1f83fe3014cf4548ae4fc57e293 326 PIRSF PIRSF001365 18 318 1.4E-67 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS11040 5629e1f83fe3014cf4548ae4fc57e293 326 SMART SM01130 21 309 6.0E-87 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS11040 5629e1f83fe3014cf4548ae4fc57e293 326 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 155 185 - T 09-03-2017 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS11040 5629e1f83fe3014cf4548ae4fc57e293 326 Pfam PF00701 Dihydrodipicolinate synthetase family 22 306 1.4E-57 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS11040 5629e1f83fe3014cf4548ae4fc57e293 326 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 29 305 8.9E-68 T 09-03-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS11040 5629e1f83fe3014cf4548ae4fc57e293 326 SUPERFAMILY SSF51569 20 308 1.36E-75 T 09-03-2017 NA29_RS11040 5629e1f83fe3014cf4548ae4fc57e293 326 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 21 307 42.84 T 09-03-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS11040 5629e1f83fe3014cf4548ae4fc57e293 326 PRINTS PR00146 Dihydrodipicolinate synthase signature 125 141 6.1E-17 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS11040 5629e1f83fe3014cf4548ae4fc57e293 326 PRINTS PR00146 Dihydrodipicolinate synthase signature 93 111 6.1E-17 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS11040 5629e1f83fe3014cf4548ae4fc57e293 326 PRINTS PR00146 Dihydrodipicolinate synthase signature 150 167 6.1E-17 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS11040 5629e1f83fe3014cf4548ae4fc57e293 326 PRINTS PR00146 Dihydrodipicolinate synthase signature 58 79 6.1E-17 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS23430 33148c2ec519924d736e810882e98f36 180 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 7.4E-15 T 09-03-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 NA29_RS23430 33148c2ec519924d736e810882e98f36 180 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 7.4E-15 T 09-03-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 NA29_RS23430 33148c2ec519924d736e810882e98f36 180 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 7.4E-15 T 09-03-2017 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 NA29_RS23430 33148c2ec519924d736e810882e98f36 180 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 77 1.1E-19 T 09-03-2017 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 NA29_RS23430 33148c2ec519924d736e810882e98f36 180 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 179 16.284 T 09-03-2017 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 NA29_RS23430 33148c2ec519924d736e810882e98f36 180 Pfam PF02416 mttA/Hcf106 family 4 34 7.4E-7 T 09-03-2017 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 NA29_RS02610 8437b2c69760b3a20e9fcbcb7d4b65bb 129 Pfam PF14534 Domain of unknown function (DUF4440) 9 116 1.7E-18 T 09-03-2017 IPR027843 Domain of unknown function DUF4440 NA29_RS02610 8437b2c69760b3a20e9fcbcb7d4b65bb 129 SUPERFAMILY SSF54427 6 124 7.21E-26 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS02610 8437b2c69760b3a20e9fcbcb7d4b65bb 129 Gene3D G3DSA:3.10.450.50 7 125 1.1E-31 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS08595 7e6bb0706950c4d4d5a2f48728e12342 852 SUPERFAMILY SSF56235 44 210 3.09E-111 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS08595 7e6bb0706950c4d4d5a2f48728e12342 852 SUPERFAMILY SSF56235 259 850 3.09E-111 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS08595 7e6bb0706950c4d4d5a2f48728e12342 852 Gene3D G3DSA:3.60.20.10 258 342 5.6E-58 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS08595 7e6bb0706950c4d4d5a2f48728e12342 852 Gene3D G3DSA:3.60.20.10 425 672 5.6E-58 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS08595 7e6bb0706950c4d4d5a2f48728e12342 852 Gene3D G3DSA:3.60.20.10 185 216 5.6E-58 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS08595 7e6bb0706950c4d4d5a2f48728e12342 852 Gene3D G3DSA:1.10.439.10 44 184 5.9E-29 T 09-03-2017 IPR023343 Penicillin amidase type, domain1 GO:0016811 NA29_RS08595 7e6bb0706950c4d4d5a2f48728e12342 852 Pfam PF01804 Penicillin amidase 47 841 2.1E-97 T 09-03-2017 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 NA29_RS08595 7e6bb0706950c4d4d5a2f48728e12342 852 Gene3D G3DSA:2.30.120.10 343 394 1.3E-11 T 09-03-2017 NA29_RS14735 7127633ea48253f53e9bd3572ff9b1c2 356 Pfam PF00155 Aminotransferase class I and II 26 350 3.8E-61 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS14735 7127633ea48253f53e9bd3572ff9b1c2 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 354 57.334 T 09-03-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 NA29_RS14735 7127633ea48253f53e9bd3572ff9b1c2 356 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 210 219 - T 09-03-2017 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 NA29_RS14735 7127633ea48253f53e9bd3572ff9b1c2 356 SUPERFAMILY SSF53383 21 351 1.41E-77 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS14735 7127633ea48253f53e9bd3572ff9b1c2 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 353 3.2E-93 T 09-03-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 NA29_RS14735 7127633ea48253f53e9bd3572ff9b1c2 356 Gene3D G3DSA:3.40.640.10 38 255 4.8E-63 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS14735 7127633ea48253f53e9bd3572ff9b1c2 356 Gene3D G3DSA:3.90.1150.10 256 354 2.0E-29 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS04095 58607131a61847afe792090482ff1aad 371 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 343 4.2E-82 T 09-03-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 NA29_RS04095 58607131a61847afe792090482ff1aad 371 SUPERFAMILY SSF51395 1 366 6.72E-119 T 09-03-2017 NA29_RS04095 58607131a61847afe792090482ff1aad 371 Gene3D G3DSA:3.20.20.70 4 365 5.1E-125 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS06070 8fbbef22e5eb03554df21b049468a4fc 1661 SUPERFAMILY SSF50985 1488 1622 9.81E-18 T 09-03-2017 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II NA29_RS06070 8fbbef22e5eb03554df21b049468a4fc 1661 SUPERFAMILY SSF50985 1269 1499 2.62E-21 T 09-03-2017 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II NA29_RS06070 8fbbef22e5eb03554df21b049468a4fc 1661 Gene3D G3DSA:2.130.10.30 1487 1622 2.0E-14 T 09-03-2017 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II NA29_RS06070 8fbbef22e5eb03554df21b049468a4fc 1661 Gene3D G3DSA:2.130.10.30 1282 1486 2.2E-15 T 09-03-2017 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II NA29_RS10165 145b6ee874f8c1a3e4f1105f901b9dd7 711 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 711 7.9E-85 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NA29_RS10165 145b6ee874f8c1a3e4f1105f901b9dd7 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 169 2.0E-21 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS10165 145b6ee874f8c1a3e4f1105f901b9dd7 711 SUPERFAMILY SSF56935 47 711 1.25E-128 T 09-03-2017 NA29_RS10165 145b6ee874f8c1a3e4f1105f901b9dd7 711 Gene3D G3DSA:2.40.170.20 184 711 4.1E-124 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS10165 145b6ee874f8c1a3e4f1105f901b9dd7 711 Pfam PF00593 TonB dependent receptor 471 708 1.7E-26 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS10165 145b6ee874f8c1a3e4f1105f901b9dd7 711 Gene3D G3DSA:2.170.130.10 34 179 3.9E-35 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS04680 ef69db76fd2b80b1c1982261be3753b2 533 SUPERFAMILY SSF51395 16 490 1.47E-132 T 09-03-2017 NA29_RS04680 ef69db76fd2b80b1c1982261be3753b2 533 PIRSF PIRSF006429 3 532 8.0E-159 T 09-03-2017 IPR024188 Glutamate synthase large subunit-like protein NA29_RS04680 ef69db76fd2b80b1c1982261be3753b2 533 Gene3D G3DSA:3.20.20.70 47 491 2.7E-123 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS04680 ef69db76fd2b80b1c1982261be3753b2 533 PIRSF PIRSF500060 8 527 3.7E-233 T 09-03-2017 IPR027283 Glutamate synthase large subunit-like protein, bacteria NA29_RS04680 ef69db76fd2b80b1c1982261be3753b2 533 Pfam PF01645 Conserved region in glutamate synthase 153 470 4.6E-81 T 09-03-2017 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 NA29_RS20620 d64be57889041fdc7f9f26fd90b12924 424 SUPERFAMILY SSF52266 203 416 7.66E-51 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain NA29_RS20620 d64be57889041fdc7f9f26fd90b12924 424 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 213 409 5.2E-25 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain NA29_RS20620 d64be57889041fdc7f9f26fd90b12924 424 Gene3D G3DSA:3.40.50.1110 209 416 2.1E-34 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain NA29_RS03745 91361035d9dee528e9188ff0371e6000 224 Pfam PF01144 Coenzyme A transferase 7 218 1.7E-74 T 09-03-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NA29_RS03745 91361035d9dee528e9188ff0371e6000 224 Gene3D G3DSA:3.40.1080.10 3 217 9.8E-92 T 09-03-2017 NA29_RS03745 91361035d9dee528e9188ff0371e6000 224 SUPERFAMILY SSF100950 2 222 1.85E-82 T 09-03-2017 NA29_RS03745 91361035d9dee528e9188ff0371e6000 224 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 09-03-2017 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 NA29_RS03745 91361035d9dee528e9188ff0371e6000 224 SMART SM00882 6 219 8.0E-89 T 09-03-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NA29_RS03745 91361035d9dee528e9188ff0371e6000 224 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 2 219 2.2E-119 T 09-03-2017 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 NA29_RS08520 1aa92652f971b0af03b2cdc588ee9bc5 220 SUPERFAMILY SSF46894 147 209 2.31E-19 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS08520 1aa92652f971b0af03b2cdc588ee9bc5 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 209 5.4E-20 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS08520 1aa92652f971b0af03b2cdc588ee9bc5 220 SMART SM00448 19 130 1.1E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS08520 1aa92652f971b0af03b2cdc588ee9bc5 220 Gene3D G3DSA:1.10.10.10 163 209 2.3E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08520 1aa92652f971b0af03b2cdc588ee9bc5 220 SUPERFAMILY SSF52172 21 156 2.99E-32 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS08520 1aa92652f971b0af03b2cdc588ee9bc5 220 Gene3D G3DSA:3.40.50.2300 21 162 3.1E-32 T 09-03-2017 NA29_RS08520 1aa92652f971b0af03b2cdc588ee9bc5 220 Pfam PF00072 Response regulator receiver domain 21 131 1.8E-23 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS08520 1aa92652f971b0af03b2cdc588ee9bc5 220 SMART SM00421 154 211 5.3E-23 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS08520 1aa92652f971b0af03b2cdc588ee9bc5 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 8.5E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS08520 1aa92652f971b0af03b2cdc588ee9bc5 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 8.5E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS08520 1aa92652f971b0af03b2cdc588ee9bc5 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 8.5E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS25080 85093acec4b8bef9fda1468ddd253558 513 Gene3D G3DSA:1.20.150.20 383 510 9.4E-49 T 09-03-2017 NA29_RS25080 85093acec4b8bef9fda1468ddd253558 513 PIRSF PIRSF039088 1 513 4.2E-238 T 09-03-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 NA29_RS25080 85093acec4b8bef9fda1468ddd253558 513 SUPERFAMILY SSF50615 10 94 9.22E-30 T 09-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS25080 85093acec4b8bef9fda1468ddd253558 513 Gene3D G3DSA:3.40.50.300 94 382 1.4E-114 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25080 85093acec4b8bef9fda1468ddd253558 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 510 1.3E-248 T 09-03-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 NA29_RS25080 85093acec4b8bef9fda1468ddd253558 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.1E-74 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS25080 85093acec4b8bef9fda1468ddd253558 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 6.6E-16 T 09-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS25080 85093acec4b8bef9fda1468ddd253558 513 Gene3D G3DSA:2.40.30.20 1 93 3.9E-35 T 09-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 NA29_RS25080 85093acec4b8bef9fda1468ddd253558 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.649 T 09-03-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 NA29_RS25080 85093acec4b8bef9fda1468ddd253558 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 4.2E-45 T 09-03-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS25080 85093acec4b8bef9fda1468ddd253558 513 SUPERFAMILY SSF52540 96 381 1.44E-94 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25080 85093acec4b8bef9fda1468ddd253558 513 SUPERFAMILY SSF47917 383 510 1.31E-45 T 09-03-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS25080 85093acec4b8bef9fda1468ddd253558 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 09-03-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS21720 ef69cbf10d80c627451994707ef65710 229 Gene3D G3DSA:3.40.50.2300 1 119 3.8E-36 T 09-03-2017 NA29_RS21720 ef69cbf10d80c627451994707ef65710 229 Gene3D G3DSA:1.10.10.10 124 221 8.6E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21720 ef69cbf10d80c627451994707ef65710 229 SUPERFAMILY SSF52172 1 173 2.93E-37 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS21720 ef69cbf10d80c627451994707ef65710 229 SMART SM00862 145 218 1.5E-23 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS21720 ef69cbf10d80c627451994707ef65710 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 3.5E-21 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS21720 ef69cbf10d80c627451994707ef65710 229 Pfam PF00072 Response regulator receiver domain 3 112 4.5E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS21720 ef69cbf10d80c627451994707ef65710 229 SMART SM00448 1 112 6.6E-36 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS09375 5aa1014f4460f2cd3b49199dc91aff54 130 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 80 99 - T 09-03-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 NA29_RS09375 5aa1014f4460f2cd3b49199dc91aff54 130 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 34 125 4.7E-43 T 09-03-2017 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 NA29_RS09375 5aa1014f4460f2cd3b49199dc91aff54 130 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 33 129 29.961 T 09-03-2017 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 NA29_RS09375 5aa1014f4460f2cd3b49199dc91aff54 130 PRINTS PR01727 Prokaryotic integration host factor signature 74 89 1.8E-13 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS09375 5aa1014f4460f2cd3b49199dc91aff54 130 PRINTS PR01727 Prokaryotic integration host factor signature 92 105 1.8E-13 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS09375 5aa1014f4460f2cd3b49199dc91aff54 130 PRINTS PR01727 Prokaryotic integration host factor signature 108 122 1.8E-13 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS09375 5aa1014f4460f2cd3b49199dc91aff54 130 SUPERFAMILY SSF47729 35 124 3.24E-31 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NA29_RS09375 5aa1014f4460f2cd3b49199dc91aff54 130 SMART SM00411 35 124 4.1E-41 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS09375 5aa1014f4460f2cd3b49199dc91aff54 130 Gene3D G3DSA:4.10.520.10 34 125 6.7E-36 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NA29_RS09375 5aa1014f4460f2cd3b49199dc91aff54 130 Pfam PF00216 Bacterial DNA-binding protein 35 123 3.9E-30 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS02940 0e83de586f61bb5943c3aa7e50775a2d 377 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 8 360 1.2E-144 T 09-03-2017 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 NA29_RS02940 0e83de586f61bb5943c3aa7e50775a2d 377 Gene3D G3DSA:3.40.640.10 22 252 3.1E-47 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS02940 0e83de586f61bb5943c3aa7e50775a2d 377 PIRSF PIRSF000524 1 377 2.8E-55 T 09-03-2017 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 NA29_RS02940 0e83de586f61bb5943c3aa7e50775a2d 377 Gene3D G3DSA:3.90.1150.10 253 359 1.2E-39 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS02940 0e83de586f61bb5943c3aa7e50775a2d 377 SUPERFAMILY SSF53383 8 367 3.09E-82 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS02940 0e83de586f61bb5943c3aa7e50775a2d 377 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 371 199.652 T 09-03-2017 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 NA29_RS02940 0e83de586f61bb5943c3aa7e50775a2d 377 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 5 362 3.0E-150 T 09-03-2017 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 NA29_RS02940 0e83de586f61bb5943c3aa7e50775a2d 377 Pfam PF00266 Aminotransferase class-V 44 309 3.7E-22 T 09-03-2017 IPR000192 Aminotransferase class V domain NA29_RS12460 b3ccafd1d3a4f2f331d0cb3936d15546 100 Pfam PF01381 Helix-turn-helix 11 60 3.6E-11 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS12460 b3ccafd1d3a4f2f331d0cb3936d15546 100 SUPERFAMILY SSF47413 1 62 2.39E-14 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS12460 b3ccafd1d3a4f2f331d0cb3936d15546 100 SMART SM00530 8 63 9.4E-8 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS12460 b3ccafd1d3a4f2f331d0cb3936d15546 100 Gene3D G3DSA:1.10.260.40 3 61 3.4E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS15455 dc6511f94aef0bc50b7113ebed0bd595 198 Gene3D G3DSA:3.40.1410.10 10 185 8.2E-45 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain NA29_RS15455 dc6511f94aef0bc50b7113ebed0bd595 198 Pfam PF04345 Chorismate lyase 20 187 5.9E-21 T 09-03-2017 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148 NA29_RS15455 dc6511f94aef0bc50b7113ebed0bd595 198 SUPERFAMILY SSF64288 7 186 1.83E-40 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain NA29_RS15455 dc6511f94aef0bc50b7113ebed0bd595 198 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 10 187 23.508 T 09-03-2017 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148 NA29_RS13260 b476e9576f52f375d03d8f9b30c1e894 275 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 172 190 - T 09-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 NA29_RS13260 b476e9576f52f375d03d8f9b30c1e894 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 166 178 2.0E-21 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase NA29_RS13260 b476e9576f52f375d03d8f9b30c1e894 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 2.0E-21 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase NA29_RS13260 b476e9576f52f375d03d8f9b30c1e894 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 2.0E-21 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase NA29_RS13260 b476e9576f52f375d03d8f9b30c1e894 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 197 209 2.0E-21 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase NA29_RS13260 b476e9576f52f375d03d8f9b30c1e894 275 Hamap MF_01974 Methionine aminopeptidase [map]. 3 255 41.505 T 09-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 NA29_RS13260 b476e9576f52f375d03d8f9b30c1e894 275 Gene3D G3DSA:3.90.230.10 3 257 1.9E-98 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS13260 b476e9576f52f375d03d8f9b30c1e894 275 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 254 1.0E-97 T 09-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 NA29_RS13260 b476e9576f52f375d03d8f9b30c1e894 275 SUPERFAMILY SSF55920 4 254 4.45E-91 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS13260 b476e9576f52f375d03d8f9b30c1e894 275 Pfam PF00557 Metallopeptidase family M24 12 246 1.6E-54 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS00090 5a784b05deac98bb7f28b4d9aa99b993 414 Pfam PF07690 Major Facilitator Superfamily 238 365 4.1E-11 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS00090 5a784b05deac98bb7f28b4d9aa99b993 414 SUPERFAMILY SSF103473 7 411 5.89E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS00090 5a784b05deac98bb7f28b4d9aa99b993 414 Gene3D G3DSA:1.20.1250.20 8 201 1.9E-22 T 09-03-2017 NA29_RS00090 5a784b05deac98bb7f28b4d9aa99b993 414 Gene3D G3DSA:1.20.1250.20 224 411 9.0E-21 T 09-03-2017 NA29_RS00090 5a784b05deac98bb7f28b4d9aa99b993 414 Pfam PF00083 Sugar (and other) transporter 9 222 5.6E-28 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS00090 5a784b05deac98bb7f28b4d9aa99b993 414 ProSitePatterns PS00217 Sugar transport proteins signature 2. 113 138 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS22155 ef1c6edf447ce23fba67ab19912e52b9 167 SUPERFAMILY SSF142433 10 162 1.7E-56 T 09-03-2017 IPR008136 CinA, C-terminal NA29_RS22155 ef1c6edf447ce23fba67ab19912e52b9 167 Gene3D G3DSA:3.90.950.20 9 164 2.0E-60 T 09-03-2017 IPR008136 CinA, C-terminal NA29_RS22155 ef1c6edf447ce23fba67ab19912e52b9 167 Pfam PF02464 Competence-damaged protein 10 161 8.2E-61 T 09-03-2017 IPR008136 CinA, C-terminal NA29_RS22155 ef1c6edf447ce23fba67ab19912e52b9 167 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 158 2.4E-49 T 09-03-2017 IPR008136 CinA, C-terminal NA29_RS04205 f6dccfa1137a4f037cb209005bb0cbe2 395 PIRSF PIRSF005962 2 393 2.9E-128 T 09-03-2017 IPR017439 Amidohydrolase GO:0016787 NA29_RS04205 f6dccfa1137a4f037cb209005bb0cbe2 395 Gene3D G3DSA:3.40.630.10 4 181 6.1E-100 T 09-03-2017 NA29_RS04205 f6dccfa1137a4f037cb209005bb0cbe2 395 Gene3D G3DSA:3.40.630.10 301 391 6.1E-100 T 09-03-2017 NA29_RS04205 f6dccfa1137a4f037cb209005bb0cbe2 395 SUPERFAMILY SSF53187 12 200 2.86E-86 T 09-03-2017 NA29_RS04205 f6dccfa1137a4f037cb209005bb0cbe2 395 SUPERFAMILY SSF53187 301 390 2.86E-86 T 09-03-2017 NA29_RS04205 f6dccfa1137a4f037cb209005bb0cbe2 395 Pfam PF07687 Peptidase dimerisation domain 188 283 7.3E-14 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS04205 f6dccfa1137a4f037cb209005bb0cbe2 395 Pfam PF01546 Peptidase family M20/M25/M40 76 386 1.3E-36 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NA29_RS04205 f6dccfa1137a4f037cb209005bb0cbe2 395 SUPERFAMILY SSF55031 186 299 1.83E-32 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS04205 f6dccfa1137a4f037cb209005bb0cbe2 395 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 377 1.4E-108 T 09-03-2017 IPR017439 Amidohydrolase GO:0016787 NA29_RS04205 f6dccfa1137a4f037cb209005bb0cbe2 395 Gene3D G3DSA:3.30.70.360 184 300 1.6E-41 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS15015 7d877f9881fece565b1d6dbd3f7e0590 493 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 57 125 5.2E-6 T 09-03-2017 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15015 7d877f9881fece565b1d6dbd3f7e0590 493 Pfam PF00361 Proton-conducting membrane transporter 132 418 4.3E-83 T 09-03-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15015 7d877f9881fece565b1d6dbd3f7e0590 493 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 486 5.0E-191 T 09-03-2017 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15015 7d877f9881fece565b1d6dbd3f7e0590 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 138 157 2.2E-51 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15015 7d877f9881fece565b1d6dbd3f7e0590 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 325 344 2.2E-51 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15015 7d877f9881fece565b1d6dbd3f7e0590 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 168 192 2.2E-51 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15015 7d877f9881fece565b1d6dbd3f7e0590 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 377 403 2.2E-51 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15015 7d877f9881fece565b1d6dbd3f7e0590 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 237 261 2.2E-51 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS12140 ff7fd8e742aa95ce672710478a92cfb2 316 SUPERFAMILY SSF52402 16 160 2.34E-21 T 09-03-2017 NA29_RS12140 ff7fd8e742aa95ce672710478a92cfb2 316 SUPERFAMILY SSF52402 171 313 4.94E-25 T 09-03-2017 NA29_RS12140 ff7fd8e742aa95ce672710478a92cfb2 316 Gene3D G3DSA:3.40.50.620 16 160 1.9E-23 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS12140 ff7fd8e742aa95ce672710478a92cfb2 316 PRINTS PR01438 Universal stress protein signature 171 189 2.3E-14 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS12140 ff7fd8e742aa95ce672710478a92cfb2 316 PRINTS PR01438 Universal stress protein signature 272 284 2.3E-14 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS12140 ff7fd8e742aa95ce672710478a92cfb2 316 PRINTS PR01438 Universal stress protein signature 290 312 2.3E-14 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS12140 ff7fd8e742aa95ce672710478a92cfb2 316 Pfam PF00582 Universal stress protein family 173 312 8.3E-24 T 09-03-2017 IPR006016 UspA GO:0006950 NA29_RS12140 ff7fd8e742aa95ce672710478a92cfb2 316 Pfam PF00582 Universal stress protein family 16 160 3.3E-13 T 09-03-2017 IPR006016 UspA GO:0006950 NA29_RS12140 ff7fd8e742aa95ce672710478a92cfb2 316 Gene3D G3DSA:3.40.50.620 168 313 4.8E-26 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS03460 0ca71fd93a6e50d40bcb8c78e0c8bda4 319 Gene3D G3DSA:3.40.800.10 10 310 4.7E-68 T 09-03-2017 IPR023696 Ureohydrolase domain NA29_RS03460 0ca71fd93a6e50d40bcb8c78e0c8bda4 319 Pfam PF00491 Arginase family 29 307 3.2E-59 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 NA29_RS03460 0ca71fd93a6e50d40bcb8c78e0c8bda4 319 SUPERFAMILY SSF52768 7 310 8.46E-63 T 09-03-2017 NA29_RS03460 0ca71fd93a6e50d40bcb8c78e0c8bda4 319 PIRSF PIRSF036979 12 314 7.3E-51 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 NA29_RS11960 9fd1f9978e3b6d7c4e1f2a20d809d1be 169 Pfam PF16103 Domain of unknown function (DUF4822) 33 160 4.7E-15 T 09-03-2017 IPR032247 Domain of unknown function DUF4822 NA29_RS20860 994283f428bc74dfa7c9c2cb81e11728 417 PIRSF PIRSF015557 23 417 3.9E-156 T 09-03-2017 IPR016633 Uncharacterised conserved protein UCP015557 NA29_RS20860 994283f428bc74dfa7c9c2cb81e11728 417 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 27 412 2.2E-150 T 09-03-2017 IPR016633 Uncharacterised conserved protein UCP015557 NA29_RS20860 994283f428bc74dfa7c9c2cb81e11728 417 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 27 412 2.9E-151 T 09-03-2017 IPR016633 Uncharacterised conserved protein UCP015557 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 SMART SM00028 294 327 210.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 SMART SM00028 484 517 330.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 SMART SM00028 408 441 0.12 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 SMART SM00028 328 361 0.02 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 SMART SM00028 747 780 29.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 SMART SM00028 48 81 380.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 SMART SM00028 599 632 220.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 Gene3D G3DSA:1.25.40.10 258 379 4.3E-10 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 927 1269 5.0E-99 T 09-03-2017 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 SUPERFAMILY SSF48452 605 664 3.53E-22 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 SUPERFAMILY SSF48452 721 848 3.53E-22 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 SUPERFAMILY SSF48452 388 556 3.53E-22 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 Pfam PF14559 Tetratricopeptide repeat 759 821 5.5E-6 T 09-03-2017 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 PRINTS PR01441 Cellulose synthase subunit C signature 56 76 1.7E-22 T 09-03-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 PRINTS PR01441 Cellulose synthase subunit C signature 1142 1166 1.7E-22 T 09-03-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 PRINTS PR01441 Cellulose synthase subunit C signature 348 374 1.7E-22 T 09-03-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 PRINTS PR01441 Cellulose synthase subunit C signature 765 793 1.7E-22 T 09-03-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 PRINTS PR01441 Cellulose synthase subunit C signature 166 178 1.7E-22 T 09-03-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 PRINTS PR01441 Cellulose synthase subunit C signature 1182 1203 1.7E-22 T 09-03-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 PRINTS PR01441 Cellulose synthase subunit C signature 196 213 1.7E-22 T 09-03-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 PRINTS PR01441 Cellulose synthase subunit C signature 431 451 1.7E-22 T 09-03-2017 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 Pfam PF13432 Tetratricopeptide repeat 301 362 1.4E-6 T 09-03-2017 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 Pfam PF13432 Tetratricopeptide repeat 379 441 3.3E-8 T 09-03-2017 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 Gene3D G3DSA:1.25.40.10 717 878 4.1E-24 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 Gene3D G3DSA:1.25.40.10 52 158 6.6E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 SUPERFAMILY SSF48452 47 117 7.32E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 Gene3D G3DSA:1.25.40.10 380 461 5.4E-19 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 Gene3D G3DSA:1.25.40.10 504 684 5.4E-19 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 SUPERFAMILY SSF48452 501 532 5.97E-22 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS10765 9d1b2e4ed382fbb4f23ad0e5bd4a60fb 1288 SUPERFAMILY SSF48452 297 444 5.97E-22 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS09945 3c3e150c1629e297b38a34e3dc30fba6 393 Gene3D G3DSA:3.40.47.10 277 392 2.1E-72 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS09945 3c3e150c1629e297b38a34e3dc30fba6 393 Gene3D G3DSA:3.40.47.10 142 193 2.1E-72 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS09945 3c3e150c1629e297b38a34e3dc30fba6 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 8.6E-153 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS09945 3c3e150c1629e297b38a34e3dc30fba6 393 PIRSF PIRSF000429 1 393 9.5E-135 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS09945 3c3e150c1629e297b38a34e3dc30fba6 393 Gene3D G3DSA:3.40.47.10 194 276 4.0E-79 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS09945 3c3e150c1629e297b38a34e3dc30fba6 393 Gene3D G3DSA:3.40.47.10 3 123 4.0E-79 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS09945 3c3e150c1629e297b38a34e3dc30fba6 393 Pfam PF02803 Thiolase, C-terminal domain 270 392 1.7E-53 T 09-03-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 NA29_RS09945 3c3e150c1629e297b38a34e3dc30fba6 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 09-03-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 NA29_RS09945 3c3e150c1629e297b38a34e3dc30fba6 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 09-03-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 NA29_RS09945 3c3e150c1629e297b38a34e3dc30fba6 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 09-03-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 NA29_RS09945 3c3e150c1629e297b38a34e3dc30fba6 393 SUPERFAMILY SSF53901 3 270 1.28E-89 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS09945 3c3e150c1629e297b38a34e3dc30fba6 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 1.9E-108 T 09-03-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 NA29_RS09945 3c3e150c1629e297b38a34e3dc30fba6 393 SUPERFAMILY SSF53901 271 392 1.75E-45 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS11230 1fe075d9db65b1afa2a190ace9e7524b 573 Pfam PF01019 Gamma-glutamyltranspeptidase 72 568 1.5E-122 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS11230 1fe075d9db65b1afa2a190ace9e7524b 573 SUPERFAMILY SSF56235 50 572 1.1E-147 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS11230 1fe075d9db65b1afa2a190ace9e7524b 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 411 429 1.0E-26 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS11230 1fe075d9db65b1afa2a190ace9e7524b 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 167 186 1.0E-26 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS11230 1fe075d9db65b1afa2a190ace9e7524b 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 469 486 1.0E-26 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS11230 1fe075d9db65b1afa2a190ace9e7524b 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 442 457 1.0E-26 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS11230 1fe075d9db65b1afa2a190ace9e7524b 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 387 405 1.0E-26 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS11230 1fe075d9db65b1afa2a190ace9e7524b 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 294 313 1.0E-26 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS11230 1fe075d9db65b1afa2a190ace9e7524b 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 79 104 1.0E-26 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS14310 7fd5a492b490475cc35c4e4df4d416be 193 SUPERFAMILY SSF56235 1 183 1.05E-27 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS14310 7fd5a492b490475cc35c4e4df4d416be 193 Gene3D G3DSA:3.60.20.10 2 172 3.0E-29 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS14310 7fd5a492b490475cc35c4e4df4d416be 193 Pfam PF00227 Proteasome subunit 2 168 2.4E-8 T 09-03-2017 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5687128|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-983168 NA29_RS11075 8c6e81cd12078f6cd4d1d23ae5a59704 482 SUPERFAMILY SSF75304 7 464 3.79E-109 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS11075 8c6e81cd12078f6cd4d1d23ae5a59704 482 ProSitePatterns PS00571 Amidases signature. 158 189 - T 09-03-2017 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 NA29_RS11075 8c6e81cd12078f6cd4d1d23ae5a59704 482 Gene3D G3DSA:3.90.1300.10 8 465 2.7E-112 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS11075 8c6e81cd12078f6cd4d1d23ae5a59704 482 Pfam PF01425 Amidase 30 451 5.0E-86 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS23015 3126ec0e42dd63e7ab904c2811968c52 649 SUPERFAMILY SSF55781 68 200 1.52E-5 T 09-03-2017 IPR029016 GAF domain-like NA29_RS23015 3126ec0e42dd63e7ab904c2811968c52 649 SUPERFAMILY SSF52540 341 577 7.81E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23015 3126ec0e42dd63e7ab904c2811968c52 649 Gene3D G3DSA:3.30.450.20 236 276 8.7E-4 T 09-03-2017 NA29_RS23015 3126ec0e42dd63e7ab904c2811968c52 649 Pfam PF02954 Bacterial regulatory protein, Fis family 604 644 1.3E-14 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS23015 3126ec0e42dd63e7ab904c2811968c52 649 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 627 647 1.1E-9 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS23015 3126ec0e42dd63e7ab904c2811968c52 649 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 610 627 1.1E-9 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS23015 3126ec0e42dd63e7ab904c2811968c52 649 Gene3D G3DSA:1.10.10.60 592 646 1.2E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS23015 3126ec0e42dd63e7ab904c2811968c52 649 Gene3D G3DSA:1.10.8.60 509 581 9.4E-18 T 09-03-2017 NA29_RS23015 3126ec0e42dd63e7ab904c2811968c52 649 Gene3D G3DSA:3.40.50.300 339 507 7.9E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23015 3126ec0e42dd63e7ab904c2811968c52 649 SMART SM00382 354 498 5.6E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS23015 3126ec0e42dd63e7ab904c2811968c52 649 SUPERFAMILY SSF46689 547 646 2.17E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS23015 3126ec0e42dd63e7ab904c2811968c52 649 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 421 436 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NA29_RS23015 3126ec0e42dd63e7ab904c2811968c52 649 Pfam PF00158 Sigma-54 interaction domain 338 501 1.5E-59 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NA29_RS23015 3126ec0e42dd63e7ab904c2811968c52 649 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 358 371 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NA29_RS22235 8eb94625161b23e35a9751306044d1eb 297 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 2 289 3.7E-70 T 09-03-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 NA29_RS22235 8eb94625161b23e35a9751306044d1eb 297 PIRSF PIRSF000401 1 297 1.9E-94 T 09-03-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 NA29_RS22235 8eb94625161b23e35a9751306044d1eb 297 Gene3D G3DSA:3.40.50.150 107 291 2.7E-41 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS22235 8eb94625161b23e35a9751306044d1eb 297 SUPERFAMILY SSF53335 89 276 1.1E-39 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS22235 8eb94625161b23e35a9751306044d1eb 297 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 294 6.5E-89 T 09-03-2017 NA29_RS22235 8eb94625161b23e35a9751306044d1eb 297 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 2 295 31.98 T 09-03-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 NA29_RS11420 48ee758473d0794f505d8f5dcd06b366 337 Pfam PF09084 NMT1/THI5 like 50 265 5.1E-22 T 09-03-2017 IPR015168 SsuA/THI5-like NA29_RS11420 48ee758473d0794f505d8f5dcd06b366 337 SUPERFAMILY SSF53850 43 270 1.79E-38 T 09-03-2017 NA29_RS11420 48ee758473d0794f505d8f5dcd06b366 337 Gene3D G3DSA:3.40.190.10 130 249 5.2E-19 T 09-03-2017 NA29_RS25270 f2eea79f76bc6b4c9e244534750f12e4 280 SUPERFAMILY SSF52540 2 242 5.45E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25270 f2eea79f76bc6b4c9e244534750f12e4 280 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS25270 f2eea79f76bc6b4c9e244534750f12e4 280 Pfam PF00005 ABC transporter 17 154 8.4E-19 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS25270 f2eea79f76bc6b4c9e244534750f12e4 280 Gene3D G3DSA:3.40.50.300 6 252 9.7E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25270 f2eea79f76bc6b4c9e244534750f12e4 280 SMART SM00382 26 259 2.3E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS14540 5c119ab5715d0a7861f8bb26ef4ae1ca 108 PIRSF PIRSF004555 3 108 2.1E-39 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family NA29_RS14540 5c119ab5715d0a7861f8bb26ef4ae1ca 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 23.687 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family NA29_RS14540 5c119ab5715d0a7861f8bb26ef4ae1ca 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 2.7E-33 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family NA29_RS14540 5c119ab5715d0a7861f8bb26ef4ae1ca 108 SUPERFAMILY SSF82607 10 102 3.92E-36 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family NA29_RS14540 5c119ab5715d0a7861f8bb26ef4ae1ca 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 98 3.7E-36 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family NA29_RS14540 5c119ab5715d0a7861f8bb26ef4ae1ca 108 Gene3D G3DSA:3.30.1310.10 3 108 8.2E-51 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family NA29_RS25030 767e09b9bc7b86509e885f97f682cd49 127 Gene3D G3DSA:3.40.50.2300 5 124 3.7E-37 T 09-03-2017 NA29_RS25030 767e09b9bc7b86509e885f97f682cd49 127 SMART SM00448 6 119 8.7E-37 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS25030 767e09b9bc7b86509e885f97f682cd49 127 Pfam PF00072 Response regulator receiver domain 8 119 1.9E-28 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS25030 767e09b9bc7b86509e885f97f682cd49 127 SUPERFAMILY SSF52172 7 124 6.26E-38 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS04195 398e65d670468cd9c978dc3a7b57c649 320 Pfam PF03466 LysR substrate binding domain 93 293 2.1E-28 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS04195 398e65d670468cd9c978dc3a7b57c649 320 Gene3D G3DSA:3.40.190.10 93 184 1.0E-17 T 09-03-2017 NA29_RS04195 398e65d670468cd9c978dc3a7b57c649 320 Gene3D G3DSA:3.40.190.10 185 264 7.9E-5 T 09-03-2017 NA29_RS04195 398e65d670468cd9c978dc3a7b57c649 320 Gene3D G3DSA:1.10.10.10 5 90 5.1E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04195 398e65d670468cd9c978dc3a7b57c649 320 SUPERFAMILY SSF46785 5 114 2.52E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04195 398e65d670468cd9c978dc3a7b57c649 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.6E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04195 398e65d670468cd9c978dc3a7b57c649 320 SUPERFAMILY SSF53850 94 299 3.1E-29 T 09-03-2017 NA29_RS07175 993cce94d112ea7ac9604d7157bc26c2 589 Pfam PF08479 POTRA domain, ShlB-type 110 169 7.8E-12 T 09-03-2017 IPR013686 Polypeptide-transport-associated, ShlB-type NA29_RS07175 993cce94d112ea7ac9604d7157bc26c2 589 PIRSF PIRSF029745 2 589 2.9E-132 T 09-03-2017 IPR027282 Two partner secretion pathway transporter GO:0015031 NA29_RS07175 993cce94d112ea7ac9604d7157bc26c2 589 Gene3D G3DSA:3.10.20.310 85 169 9.7E-15 T 09-03-2017 NA29_RS07175 993cce94d112ea7ac9604d7157bc26c2 589 Gene3D G3DSA:2.40.160.50 201 588 4.3E-105 T 09-03-2017 NA29_RS07175 993cce94d112ea7ac9604d7157bc26c2 589 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 191 528 2.0E-25 T 09-03-2017 IPR005565 Haemolysin activator HlyB NA29_RS07565 a6f90887a149d9f0b32dc03a6ae6b23f 474 Gene3D G3DSA:3.30.465.10 96 217 6.2E-37 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS07565 a6f90887a149d9f0b32dc03a6ae6b23f 474 Gene3D G3DSA:3.30.43.10 3 95 8.8E-22 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NA29_RS07565 a6f90887a149d9f0b32dc03a6ae6b23f 474 SUPERFAMILY SSF55103 190 470 3.76E-50 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NA29_RS07565 a6f90887a149d9f0b32dc03a6ae6b23f 474 SUPERFAMILY SSF56176 5 217 2.56E-72 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS07565 a6f90887a149d9f0b32dc03a6ae6b23f 474 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 468 7.8E-51 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 NA29_RS07565 a6f90887a149d9f0b32dc03a6ae6b23f 474 Pfam PF01565 FAD binding domain 41 177 1.4E-34 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NA29_RS07565 a6f90887a149d9f0b32dc03a6ae6b23f 474 Gene3D G3DSA:1.10.45.10 429 468 3.0E-12 T 09-03-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 NA29_RS19595 7755e91866cbf6e5cece85804441694f 638 Pfam PF13667 ThiC-associated domain 21 98 1.7E-34 T 09-03-2017 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 NA29_RS19595 7755e91866cbf6e5cece85804441694f 638 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 603 4.4E-217 T 09-03-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 NA29_RS19595 7755e91866cbf6e5cece85804441694f 638 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 605 56.201 T 09-03-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 NA29_RS19595 7755e91866cbf6e5cece85804441694f 638 Pfam PF01964 Radical SAM ThiC family 139 599 2.1E-200 T 09-03-2017 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 Gene3D G3DSA:3.40.120.10 178 252 1.4E-26 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 446 46.179 T 09-03-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 SUPERFAMILY SSF53738 158 258 4.32E-31 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 4.2E-18 T 09-03-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 Gene3D G3DSA:3.40.120.10 3 154 2.3E-47 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 4.8E-14 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 4.8E-14 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 4.8E-14 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 444 8.5E-180 T 09-03-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 SUPERFAMILY SSF53738 2 183 2.28E-50 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 366 2.5E-30 T 09-03-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 SUPERFAMILY SSF53738 260 366 2.83E-28 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 375 443 3.1E-14 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 Gene3D G3DSA:3.30.310.50 371 445 1.4E-15 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 137 3.1E-44 T 09-03-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 SUPERFAMILY SSF55957 359 446 5.1E-20 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 09-03-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS07290 3d3ab90626195c47d57d2bd46c421c50 447 Gene3D G3DSA:3.40.120.10 253 367 2.4E-30 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 NA29_RS17260 552320829de2714d839d730e22e4ee8b 117 Gene3D G3DSA:3.30.1330.40 10 116 1.8E-25 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS17260 552320829de2714d839d730e22e4ee8b 117 SUPERFAMILY SSF55298 8 116 5.5E-28 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS17260 552320829de2714d839d730e22e4ee8b 117 Pfam PF01042 Endoribonuclease L-PSP 7 116 6.1E-23 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family NA29_RS05065 8fd66f0be99c0b4759f30f843d9e5a08 211 SMART SM00903 19 169 4.4E-24 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS05065 8fd66f0be99c0b4759f30f843d9e5a08 211 SUPERFAMILY SSF50475 2 194 7.36E-47 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS05065 8fd66f0be99c0b4759f30f843d9e5a08 211 Gene3D G3DSA:2.30.110.10 12 187 1.0E-58 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS05065 8fd66f0be99c0b4759f30f843d9e5a08 211 Pfam PF01613 Flavin reductase like domain 22 162 6.8E-23 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS21215 23292837cdd2381e78ab545108196120 433 Gene3D G3DSA:3.65.10.10 22 223 4.5E-43 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 NA29_RS21215 23292837cdd2381e78ab545108196120 433 SUPERFAMILY SSF55205 1 429 2.13E-88 T 09-03-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 NA29_RS21215 23292837cdd2381e78ab545108196120 433 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 7.1E-56 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 NA29_RS21215 23292837cdd2381e78ab545108196120 433 Gene3D G3DSA:3.65.10.10 224 427 2.6E-33 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 NA29_RS23745 c5867ec1cb7137b3e77c797c9e920b73 207 Pfam PF01479 S4 domain 98 144 1.7E-16 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS23745 c5867ec1cb7137b3e77c797c9e920b73 207 SMART SM01390 3 96 3.3E-48 T 09-03-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 NA29_RS23745 c5867ec1cb7137b3e77c797c9e920b73 207 Gene3D G3DSA:1.10.1050.10 2 99 7.1E-42 T 09-03-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 NA29_RS23745 c5867ec1cb7137b3e77c797c9e920b73 207 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 207 1.8E-78 T 09-03-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 NA29_RS23745 c5867ec1cb7137b3e77c797c9e920b73 207 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 09-03-2017 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23745 c5867ec1cb7137b3e77c797c9e920b73 207 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 207 35.031 T 09-03-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 NA29_RS23745 c5867ec1cb7137b3e77c797c9e920b73 207 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 1.9E-31 T 09-03-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 NA29_RS23745 c5867ec1cb7137b3e77c797c9e920b73 207 Gene3D G3DSA:3.10.290.10 100 198 1.6E-30 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS23745 c5867ec1cb7137b3e77c797c9e920b73 207 SMART SM00363 97 161 6.1E-17 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS23745 c5867ec1cb7137b3e77c797c9e920b73 207 SUPERFAMILY SSF55174 2 207 8.24E-68 T 09-03-2017 NA29_RS11270 33c15071ee8703a3622a00865e6ea9fe 156 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 121 1.8E-10 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NA29_RS11270 33c15071ee8703a3622a00865e6ea9fe 156 Gene3D G3DSA:3.10.180.10 4 126 2.2E-19 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS11270 33c15071ee8703a3622a00865e6ea9fe 156 SUPERFAMILY SSF54593 3 126 3.49E-20 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS17510 543912ceae8c7a5c769679fcd4bfc9fd 370 SUPERFAMILY SSF52540 6 244 2.32E-86 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17510 543912ceae8c7a5c769679fcd4bfc9fd 370 SUPERFAMILY SSF50331 238 366 1.64E-10 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS17510 543912ceae8c7a5c769679fcd4bfc9fd 370 Gene3D G3DSA:3.40.50.300 5 236 1.6E-78 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17510 543912ceae8c7a5c769679fcd4bfc9fd 370 SMART SM00382 30 213 9.2E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS17510 543912ceae8c7a5c769679fcd4bfc9fd 370 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 36 366 4.3E-112 T 09-03-2017 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 NA29_RS17510 543912ceae8c7a5c769679fcd4bfc9fd 370 Pfam PF08402 TOBE domain 284 367 1.5E-7 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 NA29_RS17510 543912ceae8c7a5c769679fcd4bfc9fd 370 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS17510 543912ceae8c7a5c769679fcd4bfc9fd 370 Pfam PF00005 ABC transporter 24 163 1.5E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS18445 612dc01d1d5a37a898e4b16ed26c9f28 255 SMART SM00382 30 231 1.1E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS18445 612dc01d1d5a37a898e4b16ed26c9f28 255 SUPERFAMILY SSF52540 5 253 4.69E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18445 612dc01d1d5a37a898e4b16ed26c9f28 255 Pfam PF00005 ABC transporter 22 181 3.2E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS18445 612dc01d1d5a37a898e4b16ed26c9f28 255 Gene3D G3DSA:3.40.50.300 3 251 2.5E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18445 612dc01d1d5a37a898e4b16ed26c9f28 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 3.2E-10 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS06150 b58f92610d251d2ec21cf17f7fe6e243 251 SUPERFAMILY SSF46785 2 70 3.3E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06150 b58f92610d251d2ec21cf17f7fe6e243 251 SMART SM00346 1 86 0.0028 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS06150 b58f92610d251d2ec21cf17f7fe6e243 251 Gene3D G3DSA:3.30.450.40 65 243 8.5E-45 T 09-03-2017 IPR029016 GAF domain-like NA29_RS06150 b58f92610d251d2ec21cf17f7fe6e243 251 SUPERFAMILY SSF55781 67 242 2.03E-41 T 09-03-2017 IPR029016 GAF domain-like NA29_RS06150 b58f92610d251d2ec21cf17f7fe6e243 251 Pfam PF09339 IclR helix-turn-helix domain 2 49 1.4E-15 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS06150 b58f92610d251d2ec21cf17f7fe6e243 251 Pfam PF01614 Bacterial transcriptional regulator 117 239 8.5E-22 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS06150 b58f92610d251d2ec21cf17f7fe6e243 251 Gene3D G3DSA:1.10.10.10 2 57 5.6E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14930 3139744a084117735ae73a5707e552eb 521 Gene3D G3DSA:1.10.1040.10 430 513 1.9E-18 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS14930 3139744a084117735ae73a5707e552eb 521 Gene3D G3DSA:1.10.1040.10 205 300 1.4E-22 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS14930 3139744a084117735ae73a5707e552eb 521 Gene3D G3DSA:3.40.50.720 23 204 2.2E-58 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS14930 3139744a084117735ae73a5707e552eb 521 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 23 200 8.4E-63 T 09-03-2017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 NA29_RS14930 3139744a084117735ae73a5707e552eb 521 SUPERFAMILY SSF51735 23 202 2.4E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS14930 3139744a084117735ae73a5707e552eb 521 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 203 300 2.9E-22 T 09-03-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 NA29_RS14930 3139744a084117735ae73a5707e552eb 521 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 430 513 9.0E-16 T 09-03-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 NA29_RS14930 3139744a084117735ae73a5707e552eb 521 SUPERFAMILY SSF48179 202 309 4.68E-25 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS14930 3139744a084117735ae73a5707e552eb 521 SUPERFAMILY SSF48179 430 513 6.89E-17 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS03015 84e3adc6c0a8b6834da42f7f29633a59 387 SUPERFAMILY SSF103473 11 384 4.58E-59 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS03015 84e3adc6c0a8b6834da42f7f29633a59 387 Pfam PF07690 Major Facilitator Superfamily 15 342 2.3E-38 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS03015 84e3adc6c0a8b6834da42f7f29633a59 387 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 2.3E-5 T 09-03-2017 NA29_RS03015 84e3adc6c0a8b6834da42f7f29633a59 387 PRINTS PR01036 Tetracycline resistance protein TetB signature 286 310 2.3E-5 T 09-03-2017 NA29_RS03015 84e3adc6c0a8b6834da42f7f29633a59 387 PRINTS PR01036 Tetracycline resistance protein TetB signature 73 95 2.3E-5 T 09-03-2017 NA29_RS03015 84e3adc6c0a8b6834da42f7f29633a59 387 Gene3D G3DSA:1.20.1250.20 12 187 2.0E-26 T 09-03-2017 NA29_RS03015 84e3adc6c0a8b6834da42f7f29633a59 387 Gene3D G3DSA:1.20.1250.20 202 385 1.4E-22 T 09-03-2017 NA29_RS15565 0e37571c051e4a01e9539a61dda866ad 498 Pfam PF03441 FAD binding domain of DNA photolyase 278 479 1.6E-83 T 09-03-2017 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 NA29_RS15565 0e37571c051e4a01e9539a61dda866ad 498 SUPERFAMILY SSF48173 196 483 1.44E-106 T 09-03-2017 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 NA29_RS15565 0e37571c051e4a01e9539a61dda866ad 498 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 330 342 - T 09-03-2017 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal NA29_RS15565 0e37571c051e4a01e9539a61dda866ad 498 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 350 369 - T 09-03-2017 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal NA29_RS15565 0e37571c051e4a01e9539a61dda866ad 498 SUPERFAMILY SSF52425 7 169 1.83E-50 T 09-03-2017 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 NA29_RS15565 0e37571c051e4a01e9539a61dda866ad 498 Pfam PF00875 DNA photolyase 8 163 3.8E-48 T 09-03-2017 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 NA29_RS15565 0e37571c051e4a01e9539a61dda866ad 498 Gene3D G3DSA:1.25.40.80 148 287 1.4E-32 T 09-03-2017 NA29_RS15565 0e37571c051e4a01e9539a61dda866ad 498 Gene3D G3DSA:1.10.579.10 288 482 4.2E-77 T 09-03-2017 NA29_RS15565 0e37571c051e4a01e9539a61dda866ad 498 PRINTS PR00147 DNA photolyase signature 330 346 4.5E-30 T 09-03-2017 IPR002081 Cryptochrome/DNA photolyase class 1 NA29_RS15565 0e37571c051e4a01e9539a61dda866ad 498 PRINTS PR00147 DNA photolyase signature 350 368 4.5E-30 T 09-03-2017 IPR002081 Cryptochrome/DNA photolyase class 1 NA29_RS15565 0e37571c051e4a01e9539a61dda866ad 498 PRINTS PR00147 DNA photolyase signature 143 159 4.5E-30 T 09-03-2017 IPR002081 Cryptochrome/DNA photolyase class 1 NA29_RS15565 0e37571c051e4a01e9539a61dda866ad 498 PRINTS PR00147 DNA photolyase signature 389 403 4.5E-30 T 09-03-2017 IPR002081 Cryptochrome/DNA photolyase class 1 NA29_RS15565 0e37571c051e4a01e9539a61dda866ad 498 Gene3D G3DSA:3.40.50.620 6 147 3.9E-46 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS05830 f810f3e5a4ef10ec72eba7cdaabd8111 318 PIRSF PIRSF036979 20 318 1.4E-26 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 NA29_RS05830 f810f3e5a4ef10ec72eba7cdaabd8111 318 Hamap MF_00737 Formimidoylglutamase [hutG]. 3 314 39.364 T 09-03-2017 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 NA29_RS05830 f810f3e5a4ef10ec72eba7cdaabd8111 318 Gene3D G3DSA:3.40.800.10 4 314 5.0E-93 T 09-03-2017 IPR023696 Ureohydrolase domain NA29_RS05830 f810f3e5a4ef10ec72eba7cdaabd8111 318 Pfam PF00491 Arginase family 42 311 3.2E-56 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 NA29_RS05830 f810f3e5a4ef10ec72eba7cdaabd8111 318 TIGRFAM TIGR01227 hutG: formimidoylglutamase 8 312 1.9E-90 T 09-03-2017 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 NA29_RS05830 f810f3e5a4ef10ec72eba7cdaabd8111 318 PRINTS PR00116 Arginase signature 121 136 3.9E-7 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 NA29_RS05830 f810f3e5a4ef10ec72eba7cdaabd8111 318 PRINTS PR00116 Arginase signature 275 289 3.9E-7 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 NA29_RS05830 f810f3e5a4ef10ec72eba7cdaabd8111 318 PRINTS PR00116 Arginase signature 240 269 3.9E-7 T 09-03-2017 IPR006035 Ureohydrolase GO:0046872 NA29_RS05830 f810f3e5a4ef10ec72eba7cdaabd8111 318 SUPERFAMILY SSF52768 7 314 1.6E-76 T 09-03-2017 NA29_RS03395 04a68f783df5cf02045eb6315b3f966a 511 Pfam PF07690 Major Facilitator Superfamily 9 399 1.3E-46 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS03395 04a68f783df5cf02045eb6315b3f966a 511 SUPERFAMILY SSF103473 2 184 8.11E-63 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS03395 04a68f783df5cf02045eb6315b3f966a 511 SUPERFAMILY SSF103473 235 409 8.11E-63 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS03395 04a68f783df5cf02045eb6315b3f966a 511 SUPERFAMILY SSF103473 470 494 8.11E-63 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS03395 04a68f783df5cf02045eb6315b3f966a 511 Gene3D G3DSA:1.20.1250.20 471 490 1.4E-15 T 09-03-2017 NA29_RS03395 04a68f783df5cf02045eb6315b3f966a 511 Gene3D G3DSA:1.20.1250.20 244 410 1.4E-15 T 09-03-2017 NA29_RS03395 04a68f783df5cf02045eb6315b3f966a 511 PRINTS PR01035 Tetracycline resistance protein signature 13 29 7.6E-6 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NA29_RS03395 04a68f783df5cf02045eb6315b3f966a 511 PRINTS PR01035 Tetracycline resistance protein signature 126 148 7.6E-6 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NA29_RS03395 04a68f783df5cf02045eb6315b3f966a 511 Gene3D G3DSA:1.20.1250.20 4 181 3.1E-32 T 09-03-2017 NA29_RS02410 962fcba07261f731daee036c7f8da26a 137 Pfam PF03610 PTS system fructose IIA component 3 103 3.2E-20 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 NA29_RS02410 962fcba07261f731daee036c7f8da26a 137 Gene3D G3DSA:3.40.50.510 1 125 6.7E-38 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 NA29_RS02410 962fcba07261f731daee036c7f8da26a 137 SUPERFAMILY SSF53062 1 125 8.89E-31 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 NA29_RS07410 1c54db661bcdae8decd11cae868c8e7e 762 SUPERFAMILY SSF56003 309 745 1.74E-102 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS07410 1c54db661bcdae8decd11cae868c8e7e 762 Gene3D G3DSA:3.30.365.10 554 747 5.8E-43 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS07410 1c54db661bcdae8decd11cae868c8e7e 762 SUPERFAMILY SSF56003 38 228 3.21E-31 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS07410 1c54db661bcdae8decd11cae868c8e7e 762 SUPERFAMILY SSF54665 204 290 6.8E-11 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS07410 1c54db661bcdae8decd11cae868c8e7e 762 Gene3D G3DSA:3.30.365.10 388 553 1.7E-30 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS07410 1c54db661bcdae8decd11cae868c8e7e 762 Gene3D G3DSA:3.30.365.10 39 183 4.3E-30 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS07410 1c54db661bcdae8decd11cae868c8e7e 762 PIRSF PIRSF036389 1 744 7.7E-175 T 09-03-2017 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related NA29_RS07410 1c54db661bcdae8decd11cae868c8e7e 762 Gene3D G3DSA:3.30.365.10 278 338 5.2E-9 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS07410 1c54db661bcdae8decd11cae868c8e7e 762 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 40 166 7.6E-19 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS07410 1c54db661bcdae8decd11cae868c8e7e 762 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 310 596 5.9E-24 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS07410 1c54db661bcdae8decd11cae868c8e7e 762 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 610 690 1.9E-13 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS07410 1c54db661bcdae8decd11cae868c8e7e 762 Gene3D G3DSA:3.90.1170.50 184 277 9.6E-22 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS07410 1c54db661bcdae8decd11cae868c8e7e 762 SMART SM01008 203 289 1.0E-22 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS23530 0109917904bc418da310ddb2c774a846 206 Pfam PF05494 MlaC protein 33 196 3.7E-52 T 09-03-2017 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC NA29_RS23530 0109917904bc418da310ddb2c774a846 206 PIRSF PIRSF004649 1 206 2.9E-44 T 09-03-2017 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC NA29_RS23530 0109917904bc418da310ddb2c774a846 206 Gene3D G3DSA:3.10.450.50 115 170 3.2E-32 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS23530 0109917904bc418da310ddb2c774a846 206 Gene3D G3DSA:3.10.450.50 26 71 3.2E-32 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS23530 0109917904bc418da310ddb2c774a846 206 Gene3D G3DSA:1.10.10.640 171 204 6.3E-31 T 09-03-2017 IPR023094 Toluene tolerance protein, alpha-helical NA29_RS23530 0109917904bc418da310ddb2c774a846 206 Gene3D G3DSA:1.10.10.640 72 112 6.3E-31 T 09-03-2017 IPR023094 Toluene tolerance protein, alpha-helical NA29_RS08130 31d9642c392065250c897a480ff4d020 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 44 4.3E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08130 31d9642c392065250c897a480ff4d020 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 54 4.3E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08130 31d9642c392065250c897a480ff4d020 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 54 65 4.3E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08130 31d9642c392065250c897a480ff4d020 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 77 5.0E-13 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08130 31d9642c392065250c897a480ff4d020 318 SUPERFAMILY SSF46785 16 123 1.03E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08130 31d9642c392065250c897a480ff4d020 318 SUPERFAMILY SSF53850 103 314 2.17E-36 T 09-03-2017 NA29_RS08130 31d9642c392065250c897a480ff4d020 318 Gene3D G3DSA:1.10.10.10 17 100 8.4E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08130 31d9642c392065250c897a480ff4d020 318 Gene3D G3DSA:3.40.190.10 103 192 2.0E-12 T 09-03-2017 NA29_RS08130 31d9642c392065250c897a480ff4d020 318 Gene3D G3DSA:3.40.190.10 193 280 1.2E-14 T 09-03-2017 NA29_RS08130 31d9642c392065250c897a480ff4d020 318 Pfam PF03466 LysR substrate binding domain 103 310 2.3E-35 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS22440 b32b52ddbd8b2c21b32d25004e4bc93c 327 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 11 314 1.1E-95 T 09-03-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS22440 b32b52ddbd8b2c21b32d25004e4bc93c 327 Gene3D G3DSA:3.40.50.20 11 91 1.0E-28 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS22440 b32b52ddbd8b2c21b32d25004e4bc93c 327 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 10 315 35.244 T 09-03-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS22440 b32b52ddbd8b2c21b32d25004e4bc93c 327 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 70 81 - T 09-03-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS22440 b32b52ddbd8b2c21b32d25004e4bc93c 327 Pfam PF07478 D-ala D-ala ligase C-terminus 111 311 6.7E-54 T 09-03-2017 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS22440 b32b52ddbd8b2c21b32d25004e4bc93c 327 Gene3D G3DSA:3.30.1490.20 115 180 2.5E-21 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NA29_RS22440 b32b52ddbd8b2c21b32d25004e4bc93c 327 SUPERFAMILY SSF56059 103 319 7.6E-53 T 09-03-2017 NA29_RS22440 b32b52ddbd8b2c21b32d25004e4bc93c 327 Pfam PF01820 D-ala D-ala ligase N-terminus 11 93 1.4E-21 T 09-03-2017 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS22440 b32b52ddbd8b2c21b32d25004e4bc93c 327 Gene3D G3DSA:3.30.470.20 92 110 2.2E-46 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS22440 b32b52ddbd8b2c21b32d25004e4bc93c 327 Gene3D G3DSA:3.30.470.20 181 314 2.2E-46 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS22440 b32b52ddbd8b2c21b32d25004e4bc93c 327 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 256 285 - T 09-03-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS22440 b32b52ddbd8b2c21b32d25004e4bc93c 327 SUPERFAMILY SSF52440 11 103 9.21E-31 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS03445 bcee4347166cb718c9d2e60cb7e6e04d 286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 270 9.9E-51 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS03445 bcee4347166cb718c9d2e60cb7e6e04d 286 SUPERFAMILY SSF53850 18 272 1.9E-51 T 09-03-2017 NA29_RS03445 bcee4347166cb718c9d2e60cb7e6e04d 286 Gene3D G3DSA:3.40.190.10 231 272 8.4E-31 T 09-03-2017 NA29_RS03445 bcee4347166cb718c9d2e60cb7e6e04d 286 Gene3D G3DSA:3.40.190.10 41 120 8.4E-31 T 09-03-2017 NA29_RS03445 bcee4347166cb718c9d2e60cb7e6e04d 286 Gene3D G3DSA:3.40.190.10 121 228 3.4E-19 T 09-03-2017 NA29_RS03445 bcee4347166cb718c9d2e60cb7e6e04d 286 SMART SM00062 44 272 1.6E-45 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS18110 95fb66d87c1df9783a63b17439198c47 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 93 1.5E-15 T 09-03-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family NA29_RS04250 f3fb68169b125854491c31cfc0716788 436 Pfam PF00120 Glutamine synthetase, catalytic domain 98 423 2.0E-77 T 09-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NA29_RS04250 f3fb68169b125854491c31cfc0716788 436 SUPERFAMILY SSF55931 98 433 4.71E-79 T 09-03-2017 NA29_RS04250 f3fb68169b125854491c31cfc0716788 436 SMART SM01230 97 346 9.9E-58 T 09-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NA29_RS04250 f3fb68169b125854491c31cfc0716788 436 Gene3D G3DSA:3.30.590.10 101 420 1.1E-79 T 09-03-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 NA29_RS02280 4273113f8d8d33ca2672161d73acfd30 89 Pfam PF04359 Protein of unknown function (DUF493) 7 89 2.6E-32 T 09-03-2017 IPR007454 Uncharacterised protein family UPF0250 NA29_RS02280 4273113f8d8d33ca2672161d73acfd30 89 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 89 22.004 T 09-03-2017 IPR007454 Uncharacterised protein family UPF0250 NA29_RS02280 4273113f8d8d33ca2672161d73acfd30 89 SUPERFAMILY SSF117991 1 89 1.96E-27 T 09-03-2017 IPR027471 YbeD-like domain NA29_RS02280 4273113f8d8d33ca2672161d73acfd30 89 ProDom PD061650 JHP0447 HP0495 CJ0253 10 89 8.0E-5 T 09-03-2017 NA29_RS02280 4273113f8d8d33ca2672161d73acfd30 89 Gene3D G3DSA:3.30.70.1460 1 89 1.7E-33 T 09-03-2017 IPR027471 YbeD-like domain NA29_RS18180 bb9be99c03c7fd6aa2f4966b5ead86b4 323 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 153 266 3.9E-16 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NA29_RS18180 bb9be99c03c7fd6aa2f4966b5ead86b4 323 Gene3D G3DSA:3.10.180.10 148 283 3.8E-35 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS18180 bb9be99c03c7fd6aa2f4966b5ead86b4 323 Gene3D G3DSA:3.10.180.10 6 132 3.0E-8 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS18180 bb9be99c03c7fd6aa2f4966b5ead86b4 323 SUPERFAMILY SSF54593 1 279 2.36E-35 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS13030 02fd68af0573ffdf6272bcf029ea681d 410 Pfam PF07690 Major Facilitator Superfamily 32 280 6.2E-31 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS13030 02fd68af0573ffdf6272bcf029ea681d 410 Gene3D G3DSA:1.20.1250.20 26 205 1.1E-26 T 09-03-2017 NA29_RS13030 02fd68af0573ffdf6272bcf029ea681d 410 Gene3D G3DSA:1.20.1250.20 229 402 4.9E-13 T 09-03-2017 NA29_RS13030 02fd68af0573ffdf6272bcf029ea681d 410 SUPERFAMILY SSF103473 14 402 1.24E-55 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS12205 d3b55ed736d34e7e23538f972d0d800d 216 SMART SM00947 27 193 1.9E-67 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS12205 d3b55ed736d34e7e23538f972d0d800d 216 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 09-03-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS12205 d3b55ed736d34e7e23538f972d0d800d 216 SUPERFAMILY SSF53056 2 204 3.53E-65 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS12205 d3b55ed736d34e7e23538f972d0d800d 216 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 09-03-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS12205 d3b55ed736d34e7e23538f972d0d800d 216 Pfam PF00484 Carbonic anhydrase 34 188 4.1E-49 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS12205 d3b55ed736d34e7e23538f972d0d800d 216 Gene3D G3DSA:3.40.1050.10 1 204 1.7E-71 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS09755 527e86840070f0d03dd92d0e57433818 422 Gene3D G3DSA:4.10.320.10 119 155 7.4E-12 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 NA29_RS09755 527e86840070f0d03dd92d0e57433818 422 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 192 420 5.0E-81 T 09-03-2017 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 NA29_RS09755 527e86840070f0d03dd92d0e57433818 422 Pfam PF02817 e3 binding domain 118 152 3.9E-9 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 NA29_RS09755 527e86840070f0d03dd92d0e57433818 422 SUPERFAMILY SSF47005 113 154 4.05E-8 T 09-03-2017 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 NA29_RS09755 527e86840070f0d03dd92d0e57433818 422 Pfam PF00364 Biotin-requiring enzyme 5 77 4.9E-20 T 09-03-2017 IPR000089 Biotin/lipoyl attachment NA29_RS09755 527e86840070f0d03dd92d0e57433818 422 Gene3D G3DSA:3.30.559.10 190 420 3.0E-92 T 09-03-2017 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 NA29_RS09755 527e86840070f0d03dd92d0e57433818 422 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 421 2.5E-169 T 09-03-2017 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 NA29_RS09755 527e86840070f0d03dd92d0e57433818 422 SUPERFAMILY SSF52777 192 421 6.67E-90 T 09-03-2017 NA29_RS09755 527e86840070f0d03dd92d0e57433818 422 SUPERFAMILY SSF51230 2 96 2.88E-25 T 09-03-2017 IPR011053 Single hybrid motif NA29_RS09755 527e86840070f0d03dd92d0e57433818 422 Gene3D G3DSA:2.40.50.100 2 97 3.3E-26 T 09-03-2017 NA29_RS09755 527e86840070f0d03dd92d0e57433818 422 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 09-03-2017 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 NA29_RS03665 91921f097dfff7541c908caddc942203 169 Pfam PF11162 Protein of unknown function (DUF2946) 13 165 3.1E-19 T 09-03-2017 IPR021333 Protein of unknown function DUF2946 NA29_RS18675 c47f7477fec9259c29585ed3dbb8ea30 163 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 27 157 1.6E-12 T 09-03-2017 IPR019587 Polyketide cyclase/dehydrase NA29_RS18675 c47f7477fec9259c29585ed3dbb8ea30 163 Gene3D G3DSA:3.30.530.20 27 162 5.4E-20 T 09-03-2017 IPR023393 START-like domain NA29_RS18675 c47f7477fec9259c29585ed3dbb8ea30 163 SUPERFAMILY SSF55961 27 161 1.19E-18 T 09-03-2017 NA29_RS15760 199041854e5033018d8ff91d0e279b46 428 SUPERFAMILY SSF54373 269 359 3.14E-18 T 09-03-2017 NA29_RS15760 199041854e5033018d8ff91d0e279b46 428 SUPERFAMILY SSF51905 107 271 2.07E-50 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS15760 199041854e5033018d8ff91d0e279b46 428 SUPERFAMILY SSF51905 1 54 2.07E-50 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS15760 199041854e5033018d8ff91d0e279b46 428 SUPERFAMILY SSF51905 359 415 2.07E-50 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS15760 199041854e5033018d8ff91d0e279b46 428 Gene3D G3DSA:3.40.50.720 1 96 7.8E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS15760 199041854e5033018d8ff91d0e279b46 428 Gene3D G3DSA:3.40.50.720 353 415 7.8E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS15760 199041854e5033018d8ff91d0e279b46 428 Gene3D G3DSA:3.40.50.720 194 269 7.8E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS15760 199041854e5033018d8ff91d0e279b46 428 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 50.1 T 09-03-2017 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 NA29_RS15760 199041854e5033018d8ff91d0e279b46 428 Pfam PF01266 FAD dependent oxidoreductase 2 397 2.7E-67 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS15760 199041854e5033018d8ff91d0e279b46 428 Gene3D G3DSA:3.30.9.10 134 193 1.2E-14 T 09-03-2017 NA29_RS15760 199041854e5033018d8ff91d0e279b46 428 Gene3D G3DSA:3.30.9.10 270 352 1.2E-14 T 09-03-2017 NA29_RS16860 76217bbd0a697e4eb6dbad361228e9dd 340 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 11 303 4.1E-30 T 09-03-2017 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD NA29_RS16860 76217bbd0a697e4eb6dbad361228e9dd 340 TIGRFAM TIGR03476 HpnL: putative membrane protein 1 316 3.6E-106 T 09-03-2017 NA29_RS16860 76217bbd0a697e4eb6dbad361228e9dd 340 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 11 298 2.2E-16 T 09-03-2017 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD NA29_RS02350 fb7906554e600719f21b3f770e8b611b 243 Gene3D G3DSA:3.40.1050.10 41 242 3.9E-54 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS02350 fb7906554e600719f21b3f770e8b611b 243 SMART SM00947 86 243 2.2E-47 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS02350 fb7906554e600719f21b3f770e8b611b 243 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 98 105 - T 09-03-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS02350 fb7906554e600719f21b3f770e8b611b 243 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 135 155 - T 09-03-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS02350 fb7906554e600719f21b3f770e8b611b 243 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 41 0.0014 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NA29_RS02350 fb7906554e600719f21b3f770e8b611b 243 SUPERFAMILY SSF53056 41 243 2.09E-50 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS02350 fb7906554e600719f21b3f770e8b611b 243 Pfam PF00484 Carbonic anhydrase 94 240 2.3E-36 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS20780 51c6d4b2c0a0660f078d5538c53f1c7b 322 Pfam PF01965 DJ-1/PfpI family 2 186 7.0E-7 T 09-03-2017 IPR002818 DJ-1/PfpI NA29_RS20780 51c6d4b2c0a0660f078d5538c53f1c7b 322 Gene3D G3DSA:1.10.10.60 228 278 1.0E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS20780 51c6d4b2c0a0660f078d5538c53f1c7b 322 SUPERFAMILY SSF52317 1 203 7.4E-26 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS20780 51c6d4b2c0a0660f078d5538c53f1c7b 322 SMART SM00342 238 320 1.5E-14 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS20780 51c6d4b2c0a0660f078d5538c53f1c7b 322 Gene3D G3DSA:3.40.50.880 1 227 6.4E-32 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS20780 51c6d4b2c0a0660f078d5538c53f1c7b 322 Pfam PF12833 Helix-turn-helix domain 245 320 6.7E-16 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS05180 e8f298b7477eecc3d09528233f872ae5 4544 Pfam PF05860 haemagglutination activity domain 137 232 2.5E-17 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS05180 e8f298b7477eecc3d09528233f872ae5 4544 Pfam PF12545 Filamentous haemagglutinin family outer membrane protein 4333 4443 3.5E-38 T 09-03-2017 IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739 NA29_RS05180 e8f298b7477eecc3d09528233f872ae5 4544 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 159 232 2.1E-19 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS05180 e8f298b7477eecc3d09528233f872ae5 4544 SMART SM00912 122 238 1.6E-19 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS05180 e8f298b7477eecc3d09528233f872ae5 4544 SUPERFAMILY SSF51126 461 485 1.38E-29 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS05180 e8f298b7477eecc3d09528233f872ae5 4544 SUPERFAMILY SSF51126 269 412 1.38E-29 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS05180 e8f298b7477eecc3d09528233f872ae5 4544 SUPERFAMILY SSF51126 136 242 1.38E-29 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS25255 025c5999464008eb8db17269ae72301e 369 SUPERFAMILY SSF144064 29 355 1.18E-126 T 09-03-2017 NA29_RS25255 025c5999464008eb8db17269ae72301e 369 Gene3D G3DSA:3.40.1570.10 30 176 4.6E-8 T 09-03-2017 NA29_RS25255 025c5999464008eb8db17269ae72301e 369 Gene3D G3DSA:3.40.1570.10 207 342 4.9E-11 T 09-03-2017 NA29_RS25255 025c5999464008eb8db17269ae72301e 369 Pfam PF05171 Haemin-degrading HemS.ChuX domain 226 355 1.1E-40 T 09-03-2017 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 NA29_RS25255 025c5999464008eb8db17269ae72301e 369 Pfam PF05171 Haemin-degrading HemS.ChuX domain 47 174 4.5E-42 T 09-03-2017 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 NA29_RS15575 c7e683ab9f2795895a5271649f4f9cb1 169 Pfam PF02308 MgtC family 11 140 5.0E-36 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NA29_RS15575 c7e683ab9f2795895a5271649f4f9cb1 169 PRINTS PR01837 MgtC/SapB protein signature 14 33 1.4E-35 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NA29_RS15575 c7e683ab9f2795895a5271649f4f9cb1 169 PRINTS PR01837 MgtC/SapB protein signature 33 51 1.4E-35 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NA29_RS15575 c7e683ab9f2795895a5271649f4f9cb1 169 PRINTS PR01837 MgtC/SapB protein signature 94 118 1.4E-35 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NA29_RS15575 c7e683ab9f2795895a5271649f4f9cb1 169 PRINTS PR01837 MgtC/SapB protein signature 65 87 1.4E-35 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NA29_RS11525 198f6d32e6367e4d39d1eb218df489ca 221 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 36 177 1.8E-14 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS11525 198f6d32e6367e4d39d1eb218df489ca 221 SUPERFAMILY SSF56784 13 215 3.24E-36 T 09-03-2017 IPR023214 HAD-like domain NA29_RS11525 198f6d32e6367e4d39d1eb218df489ca 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 13 24 1.4E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS11525 198f6d32e6367e4d39d1eb218df489ca 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 175 188 1.4E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS11525 198f6d32e6367e4d39d1eb218df489ca 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 1.4E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS11525 198f6d32e6367e4d39d1eb218df489ca 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 1.4E-9 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS11525 198f6d32e6367e4d39d1eb218df489ca 221 Gene3D G3DSA:3.40.50.1000 13 202 2.5E-29 T 09-03-2017 IPR023214 HAD-like domain NA29_RS11525 198f6d32e6367e4d39d1eb218df489ca 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 17 185 9.1E-14 T 09-03-2017 IPR023214 HAD-like domain NA29_RS20870 a51d38cbe4821ef97910b22c822e409d 344 SUPERFAMILY SSF51445 7 310 3.05E-77 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily NA29_RS20870 a51d38cbe4821ef97910b22c822e409d 344 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 19 302 2.8E-68 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NA29_RS20870 a51d38cbe4821ef97910b22c822e409d 344 Gene3D G3DSA:3.20.20.300 8 311 2.2E-85 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 NA29_RS20870 a51d38cbe4821ef97910b22c822e409d 344 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 8 343 49.576 T 09-03-2017 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 NA29_RS20870 a51d38cbe4821ef97910b22c822e409d 344 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 240 257 - T 09-03-2017 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 NA29_RS16725 bed1a57c19b2bfb4b95f40a2a672d6b6 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 71 2.3E-16 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16725 bed1a57c19b2bfb4b95f40a2a672d6b6 243 SUPERFAMILY SSF46785 4 75 1.15E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16725 bed1a57c19b2bfb4b95f40a2a672d6b6 243 Gene3D G3DSA:1.20.120.530 87 222 1.4E-26 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS16725 bed1a57c19b2bfb4b95f40a2a672d6b6 243 SUPERFAMILY SSF48008 90 223 7.32E-26 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS16725 bed1a57c19b2bfb4b95f40a2a672d6b6 243 Gene3D G3DSA:1.10.10.10 3 77 9.2E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16725 bed1a57c19b2bfb4b95f40a2a672d6b6 243 Pfam PF07729 FCD domain 94 218 7.3E-23 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS16725 bed1a57c19b2bfb4b95f40a2a672d6b6 243 SMART SM00345 12 71 1.6E-14 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16725 bed1a57c19b2bfb4b95f40a2a672d6b6 243 SMART SM00895 93 219 2.3E-20 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS19335 9af6c03dcbf2aafd4ac1d4e8f64c80b9 137 Pfam PF03479 Domain of unknown function (DUF296) 19 133 1.6E-14 T 09-03-2017 IPR005175 PPC domain NA29_RS19335 9af6c03dcbf2aafd4ac1d4e8f64c80b9 137 SUPERFAMILY SSF117856 13 134 1.49E-18 T 09-03-2017 NA29_RS19335 9af6c03dcbf2aafd4ac1d4e8f64c80b9 137 Gene3D G3DSA:3.30.1330.80 14 134 4.2E-20 T 09-03-2017 NA29_RS13765 0c5d1901c54be33178ce5a57ecc84c27 425 Pfam PF04079 Segregation and condensation complex subunit ScpB 10 167 1.6E-46 T 09-03-2017 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 NA29_RS13765 0c5d1901c54be33178ce5a57ecc84c27 425 SUPERFAMILY SSF46785 83 158 3.87E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13765 0c5d1901c54be33178ce5a57ecc84c27 425 Gene3D G3DSA:1.10.10.10 82 158 8.1E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13765 0c5d1901c54be33178ce5a57ecc84c27 425 Gene3D G3DSA:1.10.10.10 1 79 2.0E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13765 0c5d1901c54be33178ce5a57ecc84c27 425 SUPERFAMILY SSF46785 1 80 4.35E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13765 0c5d1901c54be33178ce5a57ecc84c27 425 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 13 173 7.9E-32 T 09-03-2017 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 NA29_RS20720 dd2ed8530294e570a23addb1f3280d6e 574 Pfam PF12729 Four helix bundle sensory module for signal transduction 27 208 8.7E-15 T 09-03-2017 IPR024478 4HB MCP domain NA29_RS20720 dd2ed8530294e570a23addb1f3280d6e 574 SMART SM00283 307 554 1.7E-84 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS20720 dd2ed8530294e570a23addb1f3280d6e 574 Gene3D G3DSA:1.10.287.950 322 526 8.5E-57 T 09-03-2017 NA29_RS20720 dd2ed8530294e570a23addb1f3280d6e 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 482 511 3.5E-50 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS20720 dd2ed8530294e570a23addb1f3280d6e 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 357 3.5E-50 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS20720 dd2ed8530294e570a23addb1f3280d6e 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 3.5E-50 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS20720 dd2ed8530294e570a23addb1f3280d6e 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 432 3.5E-50 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS20720 dd2ed8530294e570a23addb1f3280d6e 574 SUPERFAMILY SSF58104 288 558 5.62E-63 T 09-03-2017 NA29_RS20720 dd2ed8530294e570a23addb1f3280d6e 574 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 366 553 4.7E-59 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS17555 ece440929a65f49850531642d8bdbd36 322 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 9 215 2.6E-75 T 09-03-2017 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS17555 ece440929a65f49850531642d8bdbd36 322 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 8 306 37.463 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS17555 ece440929a65f49850531642d8bdbd36 322 Gene3D G3DSA:3.40.190.10 7 113 1.6E-47 T 09-03-2017 NA29_RS17555 ece440929a65f49850531642d8bdbd36 322 PIRSF PIRSF001438 1 318 1.4E-114 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS17555 ece440929a65f49850531642d8bdbd36 322 PRINTS PR00151 Porphobilinogen deaminase signature 79 98 1.5E-45 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS17555 ece440929a65f49850531642d8bdbd36 322 PRINTS PR00151 Porphobilinogen deaminase signature 48 68 1.5E-45 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS17555 ece440929a65f49850531642d8bdbd36 322 PRINTS PR00151 Porphobilinogen deaminase signature 127 144 1.5E-45 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS17555 ece440929a65f49850531642d8bdbd36 322 PRINTS PR00151 Porphobilinogen deaminase signature 233 250 1.5E-45 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS17555 ece440929a65f49850531642d8bdbd36 322 PRINTS PR00151 Porphobilinogen deaminase signature 146 163 1.5E-45 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS17555 ece440929a65f49850531642d8bdbd36 322 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 234 250 - T 09-03-2017 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS17555 ece440929a65f49850531642d8bdbd36 322 Gene3D G3DSA:3.30.160.40 224 310 2.5E-21 T 09-03-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS17555 ece440929a65f49850531642d8bdbd36 322 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 229 304 2.2E-17 T 09-03-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS17555 ece440929a65f49850531642d8bdbd36 322 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 9 306 2.7E-102 T 09-03-2017 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS17555 ece440929a65f49850531642d8bdbd36 322 SUPERFAMILY SSF53850 8 222 1.25E-81 T 09-03-2017 NA29_RS17555 ece440929a65f49850531642d8bdbd36 322 SUPERFAMILY SSF54782 223 311 1.57E-19 T 09-03-2017 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS17555 ece440929a65f49850531642d8bdbd36 322 Gene3D G3DSA:3.40.190.10 114 202 2.2E-37 T 09-03-2017 NA29_RS07025 0cd481f7f282366f561290778d3a0a8b 746 PIRSF PIRSF009407 1 744 0.0 T 09-03-2017 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 NA29_RS07025 0cd481f7f282366f561290778d3a0a8b 746 Gene3D G3DSA:3.40.718.10 158 286 1.0E-33 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 NA29_RS07025 0cd481f7f282366f561290778d3a0a8b 746 Gene3D G3DSA:3.40.718.10 541 648 1.0E-33 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 NA29_RS07025 0cd481f7f282366f561290778d3a0a8b 746 Gene3D G3DSA:3.40.718.10 341 364 1.0E-33 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 NA29_RS07025 0cd481f7f282366f561290778d3a0a8b 746 SUPERFAMILY SSF53659 5 743 0.0 T 09-03-2017 NA29_RS07025 0cd481f7f282366f561290778d3a0a8b 746 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 744 0.0 T 09-03-2017 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 NA29_RS07025 0cd481f7f282366f561290778d3a0a8b 746 Pfam PF03971 Monomeric isocitrate dehydrogenase 8 740 0.0 T 09-03-2017 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 NA29_RS09085 8fe746f0796a1e829b9921e067ba68b1 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 3.3E-63 T 09-03-2017 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 NA29_RS09085 8fe746f0796a1e829b9921e067ba68b1 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 1.9E-26 T 09-03-2017 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 NA29_RS09085 8fe746f0796a1e829b9921e067ba68b1 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 7.0E-36 T 09-03-2017 NA29_RS09085 8fe746f0796a1e829b9921e067ba68b1 163 Pfam PF13710 ACT domain 12 73 4.0E-15 T 09-03-2017 NA29_RS09085 8fe746f0796a1e829b9921e067ba68b1 163 SUPERFAMILY SSF55021 79 162 7.63E-26 T 09-03-2017 NA29_RS09085 8fe746f0796a1e829b9921e067ba68b1 163 Gene3D G3DSA:3.30.70.1150 83 162 5.3E-29 T 09-03-2017 NA29_RS09085 8fe746f0796a1e829b9921e067ba68b1 163 SUPERFAMILY SSF55021 1 76 1.69E-22 T 09-03-2017 NA29_RS09085 8fe746f0796a1e829b9921e067ba68b1 163 Gene3D G3DSA:3.30.70.260 1 78 1.0E-36 T 09-03-2017 NA29_RS06035 6fd2bcbad259168ad2b3374138a81596 376 SUPERFAMILY SSF53756 81 369 6.12E-25 T 09-03-2017 NA29_RS06035 6fd2bcbad259168ad2b3374138a81596 376 Gene3D G3DSA:3.40.50.2000 216 334 2.2E-17 T 09-03-2017 NA29_RS06035 6fd2bcbad259168ad2b3374138a81596 376 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 257 336 6.5E-13 T 09-03-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 NA29_RS08300 e67cce4d211446ae5f90f88885662ffb 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.1E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08300 e67cce4d211446ae5f90f88885662ffb 308 SUPERFAMILY SSF53850 91 303 2.71E-29 T 09-03-2017 NA29_RS08300 e67cce4d211446ae5f90f88885662ffb 308 Gene3D G3DSA:3.40.190.10 180 269 2.7E-21 T 09-03-2017 NA29_RS08300 e67cce4d211446ae5f90f88885662ffb 308 SUPERFAMILY SSF46785 5 82 1.69E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08300 e67cce4d211446ae5f90f88885662ffb 308 Gene3D G3DSA:3.40.190.10 95 179 2.8E-19 T 09-03-2017 NA29_RS08300 e67cce4d211446ae5f90f88885662ffb 308 Gene3D G3DSA:1.10.10.10 3 82 3.2E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08300 e67cce4d211446ae5f90f88885662ffb 308 Pfam PF03466 LysR substrate binding domain 90 299 3.4E-28 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 Gene3D G3DSA:3.30.565.10 571 734 1.1E-33 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 Gene3D G3DSA:3.30.450.20 470 510 6.1E-4 T 09-03-2017 NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 Pfam PF00512 His Kinase A (phospho-acceptor) domain 506 568 7.4E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 Pfam PF00072 Response regulator receiver domain 878 986 1.6E-15 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 Pfam PF01627 Hpt domain 1032 1106 2.3E-9 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 SMART SM00448 876 986 2.6E-14 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 SUPERFAMILY SSF47384 492 571 3.14E-17 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 618 730 1.9E-20 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 SUPERFAMILY SSF52172 876 993 3.42E-22 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 Gene3D G3DSA:1.20.120.160 1030 1112 1.1E-13 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 SUPERFAMILY SSF55874 559 730 1.57E-34 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 PRINTS PR00344 Bacterial sensor protein C-terminal signature 716 729 4.0E-10 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 PRINTS PR00344 Bacterial sensor protein C-terminal signature 692 710 4.0E-10 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 PRINTS PR00344 Bacterial sensor protein C-terminal signature 658 672 4.0E-10 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 SMART SM00387 617 734 8.9E-26 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 Gene3D G3DSA:3.40.50.2300 878 988 1.7E-22 T 09-03-2017 NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 Gene3D G3DSA:1.10.287.130 511 566 2.7E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 SUPERFAMILY SSF47226 1031 1113 4.97E-13 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS10660 4cea22c7f599632de45d9fac8e57e377 1124 SMART SM00388 505 570 6.4E-18 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS08230 72b2274b5523905ee817bdc6391b76bc 139 SUPERFAMILY SSF54593 4 131 3.58E-24 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS08230 72b2274b5523905ee817bdc6391b76bc 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 127 9.6E-6 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NA29_RS08230 72b2274b5523905ee817bdc6391b76bc 139 Gene3D G3DSA:3.10.180.10 6 135 3.3E-25 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS22260 567d6addcc261a06b431d2015ad068d9 215 Pfam PF07382 Histone H1-like nucleoprotein HC2 51 214 1.3E-19 T 09-03-2017 IPR009970 Histone H1-like nucleoprotein HC2 GO:0003677|GO:0030261 NA29_RS23620 e391e2854cca7f3a650cf9ec612d730d 233 Gene3D G3DSA:3.30.70.1290 15 127 1.7E-13 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 NA29_RS23620 e391e2854cca7f3a650cf9ec612d730d 233 SUPERFAMILY SSF143422 3 127 6.15E-31 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 NA29_RS23620 e391e2854cca7f3a650cf9ec612d730d 233 SMART SM01321 9 124 4.5E-43 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 NA29_RS23620 e391e2854cca7f3a650cf9ec612d730d 233 Pfam PF01797 Transposase IS200 like 14 122 1.8E-16 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 NA29_RS16445 3e265af1b2711750bb23caad1fb055bc 257 SUPERFAMILY SSF56529 49 255 4.06E-59 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS16445 3e265af1b2711750bb23caad1fb055bc 257 Pfam PF10370 Domain of unknown function (DUF2437) 4 52 5.6E-8 T 09-03-2017 IPR018833 Domain of unknown function DUF2437 NA29_RS16445 3e265af1b2711750bb23caad1fb055bc 257 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 57 254 8.3E-52 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS16445 3e265af1b2711750bb23caad1fb055bc 257 Gene3D G3DSA:3.90.850.10 49 255 6.7E-65 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS24990 46a6fd602bcdf76dd09685c4a4d2c1f3 359 Pfam PF00072 Response regulator receiver domain 7 109 4.3E-25 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS24990 46a6fd602bcdf76dd09685c4a4d2c1f3 359 SUPERFAMILY SSF52172 4 109 2.42E-28 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS24990 46a6fd602bcdf76dd09685c4a4d2c1f3 359 PIRSF PIRSF000876 2 354 1.4E-138 T 09-03-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NA29_RS24990 46a6fd602bcdf76dd09685c4a4d2c1f3 359 SMART SM00448 5 124 2.7E-22 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS24990 46a6fd602bcdf76dd09685c4a4d2c1f3 359 Gene3D G3DSA:3.40.50.180 162 350 1.6E-81 T 09-03-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NA29_RS24990 46a6fd602bcdf76dd09685c4a4d2c1f3 359 Pfam PF01339 CheB methylesterase 166 344 9.5E-60 T 09-03-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NA29_RS24990 46a6fd602bcdf76dd09685c4a4d2c1f3 359 SUPERFAMILY SSF52738 162 349 4.32E-71 T 09-03-2017 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NA29_RS24990 46a6fd602bcdf76dd09685c4a4d2c1f3 359 Gene3D G3DSA:3.40.50.2300 4 109 3.4E-28 T 09-03-2017 NA29_RS24990 46a6fd602bcdf76dd09685c4a4d2c1f3 359 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 350 41.488 T 09-03-2017 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 NA29_RS12590 4f2809c137dfa7ea68903ddb3547dc82 643 SUPERFAMILY SSF52540 390 636 1.84E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS12590 4f2809c137dfa7ea68903ddb3547dc82 643 Pfam PF02653 Branched-chain amino acid transport system / permease component 27 338 8.3E-40 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS12590 4f2809c137dfa7ea68903ddb3547dc82 643 Pfam PF00005 ABC transporter 406 566 8.6E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS12590 4f2809c137dfa7ea68903ddb3547dc82 643 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 615 637 8.2E-11 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS12590 4f2809c137dfa7ea68903ddb3547dc82 643 SMART SM00382 415 614 6.5E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS12590 4f2809c137dfa7ea68903ddb3547dc82 643 Gene3D G3DSA:3.40.50.300 388 635 1.5E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11485 cb230240db25fa7883eebdc492ec7cdf 262 Gene3D G3DSA:1.10.3720.10 5 258 9.2E-34 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS11485 cb230240db25fa7883eebdc492ec7cdf 262 SUPERFAMILY SSF161098 3 249 2.09E-36 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS11485 cb230240db25fa7883eebdc492ec7cdf 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 249 1.0E-7 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS00670 0dd1283e109675e5b5a5f48707c714bc 462 Gene3D G3DSA:3.30.450.20 36 184 3.2E-48 T 09-03-2017 NA29_RS00670 0dd1283e109675e5b5a5f48707c714bc 462 Pfam PF07730 Histidine kinase 249 315 3.8E-18 T 09-03-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NA29_RS00670 0dd1283e109675e5b5a5f48707c714bc 462 SMART SM01049 42 131 2.7E-28 T 09-03-2017 IPR033480 Single Cache domain 2 NA29_RS00670 0dd1283e109675e5b5a5f48707c714bc 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 448 7.4E-6 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00670 0dd1283e109675e5b5a5f48707c714bc 462 Pfam PF17200 Single Cache domain 2 48 189 1.0E-37 T 09-03-2017 IPR033480 Single Cache domain 2 NA29_RS00670 0dd1283e109675e5b5a5f48707c714bc 462 SUPERFAMILY SSF55874 317 446 4.06E-17 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00670 0dd1283e109675e5b5a5f48707c714bc 462 PIRSF PIRSF037314 1 461 1.0E-177 T 09-03-2017 IPR017171 Signal transduction histidine kinase, MctS NA29_RS00670 0dd1283e109675e5b5a5f48707c714bc 462 Gene3D G3DSA:3.30.565.10 334 449 1.5E-7 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00670 0dd1283e109675e5b5a5f48707c714bc 462 SMART SM00387 354 449 4.3E-10 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS21975 23d0c566440c268badb75df513b28e0a 277 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 46 73 - T 09-03-2017 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 NA29_RS21975 23d0c566440c268badb75df513b28e0a 277 Gene3D G3DSA:3.40.50.150 11 204 1.8E-65 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS21975 23d0c566440c268badb75df513b28e0a 277 Gene3D G3DSA:1.10.8.100 209 270 1.3E-19 T 09-03-2017 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201 NA29_RS21975 23d0c566440c268badb75df513b28e0a 277 SUPERFAMILY SSF53335 10 271 7.94E-72 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS21975 23d0c566440c268badb75df513b28e0a 277 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 14 271 53.016 T 09-03-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 NA29_RS21975 23d0c566440c268badb75df513b28e0a 277 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 15 269 5.0E-77 T 09-03-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 NA29_RS21975 23d0c566440c268badb75df513b28e0a 277 SMART SM00650 30 204 1.3E-77 T 09-03-2017 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 NA29_RS21975 23d0c566440c268badb75df513b28e0a 277 Pfam PF00398 Ribosomal RNA adenine dimethylase 15 268 2.9E-63 T 09-03-2017 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 Gene3D G3DSA:3.40.50.620 420 576 1.0E-147 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 Gene3D G3DSA:3.40.50.620 622 651 1.0E-147 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 Gene3D G3DSA:3.40.50.620 4 224 1.0E-147 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 SUPERFAMILY SSF52374 7 225 8.45E-145 T 09-03-2017 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 SUPERFAMILY SSF52374 419 671 8.45E-145 T 09-03-2017 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 527 549 1.7E-47 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 1.7E-47 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 560 570 1.7E-47 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 1.7E-47 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 1.7E-47 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 1.7E-47 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 PRINTS PR00985 Leucyl-tRNA synthetase signature 490 508 1.7E-47 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 Pfam PF09334 tRNA synthetases class I (M) 38 171 2.6E-18 T 09-03-2017 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 8 863 0.0 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 622 662 6.2E-7 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 421 575 9.5E-9 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 Gene3D G3DSA:1.10.730.10 652 799 5.4E-35 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 SUPERFAMILY SSF50677 225 417 8.58E-49 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 406 5.3E-68 T 09-03-2017 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 Pfam PF08264 Anticodon-binding domain of tRNA 705 825 6.1E-14 T 09-03-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 Gene3D G3DSA:3.90.740.10 225 269 2.0E-40 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 Gene3D G3DSA:3.90.740.10 303 418 2.0E-40 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 SUPERFAMILY SSF47323 666 863 2.62E-30 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS22075 85de3b2c00f911b058cd6d82ec879708 863 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 863 22.469 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 NA29_RS20445 daf333113f53070e775a07295e152581 472 Gene3D G3DSA:3.90.1150.10 328 461 8.2E-19 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS20445 daf333113f53070e775a07295e152581 472 Pfam PF00155 Aminotransferase class I and II 117 446 1.7E-26 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS20445 daf333113f53070e775a07295e152581 472 SUPERFAMILY SSF46785 2 64 1.0E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20445 daf333113f53070e775a07295e152581 472 Gene3D G3DSA:1.10.10.10 1 67 4.1E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20445 daf333113f53070e775a07295e152581 472 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 60 1.6E-11 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS20445 daf333113f53070e775a07295e152581 472 SUPERFAMILY SSF53383 105 462 6.53E-84 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS20445 daf333113f53070e775a07295e152581 472 Gene3D G3DSA:3.40.640.10 121 327 9.7E-44 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS20445 daf333113f53070e775a07295e152581 472 SMART SM00345 1 60 8.1E-14 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS05440 73d8977ce08d6c19496bf4692fa92ee6 627 Gene3D G3DSA:3.30.450.40 5 180 6.3E-20 T 09-03-2017 IPR029016 GAF domain-like NA29_RS05440 73d8977ce08d6c19496bf4692fa92ee6 627 SMART SM00065 23 174 0.0022 T 09-03-2017 IPR003018 GAF domain GO:0005515 NA29_RS05440 73d8977ce08d6c19496bf4692fa92ee6 627 SUPERFAMILY SSF55781 23 172 1.11E-15 T 09-03-2017 IPR029016 GAF domain-like NA29_RS05440 73d8977ce08d6c19496bf4692fa92ee6 627 Pfam PF13185 GAF domain 22 165 4.3E-8 T 09-03-2017 IPR003018 GAF domain GO:0005515 NA29_RS05440 73d8977ce08d6c19496bf4692fa92ee6 627 Pfam PF13556 PucR C-terminal helix-turn-helix domain 537 594 2.5E-19 T 09-03-2017 IPR025736 PucR C-terminal helix-turn-helix domain NA29_RS21350 80b2321339cbdd897a57fe4f2ee75446 315 SUPERFAMILY SSF55961 11 157 3.46E-36 T 09-03-2017 NA29_RS21350 80b2321339cbdd897a57fe4f2ee75446 315 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 181 313 2.4E-20 T 09-03-2017 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NA29_RS21350 80b2321339cbdd897a57fe4f2ee75446 315 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 24 155 2.6E-24 T 09-03-2017 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NA29_RS21350 80b2321339cbdd897a57fe4f2ee75446 315 SUPERFAMILY SSF55961 172 313 8.56E-29 T 09-03-2017 NA29_RS21350 80b2321339cbdd897a57fe4f2ee75446 315 Gene3D G3DSA:3.30.530.20 173 314 9.8E-28 T 09-03-2017 IPR023393 START-like domain NA29_RS21350 80b2321339cbdd897a57fe4f2ee75446 315 Gene3D G3DSA:3.30.530.20 8 159 1.0E-40 T 09-03-2017 IPR023393 START-like domain NA29_RS03380 d80a2d49116d4ea198b5aaa71140c8f8 264 SUPERFAMILY SSF53639 25 237 5.89E-61 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS03380 d80a2d49116d4ea198b5aaa71140c8f8 264 Gene3D G3DSA:3.40.225.10 27 237 3.3E-59 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS03380 d80a2d49116d4ea198b5aaa71140c8f8 264 SMART SM01007 31 212 8.1E-48 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS03380 d80a2d49116d4ea198b5aaa71140c8f8 264 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 31 211 8.0E-43 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS10430 9a9b65fe0830ad27fdb55956ac308da3 505 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 22 475 2.1E-133 T 09-03-2017 IPR003846 Uncharacterised protein family UPF0061 NA29_RS10430 9a9b65fe0830ad27fdb55956ac308da3 505 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 18 491 44.964 T 09-03-2017 IPR003846 Uncharacterised protein family UPF0061 NA29_RS10465 9e568ee324ff13914ea5e6e9ead9c0c4 201 Gene3D G3DSA:3.40.50.850 1 198 3.3E-63 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS10465 9e568ee324ff13914ea5e6e9ead9c0c4 201 Pfam PF00857 Isochorismatase family 7 197 1.0E-26 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS10465 9e568ee324ff13914ea5e6e9ead9c0c4 201 SUPERFAMILY SSF52499 6 198 7.46E-44 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS14390 8ce49a84e22e138de285fa47c4ab5853 445 Gene3D G3DSA:3.30.300.20 361 437 1.2E-25 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta NA29_RS14390 8ce49a84e22e138de285fa47c4ab5853 445 SUPERFAMILY SSF52540 4 166 9.26E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14390 8ce49a84e22e138de285fa47c4ab5853 445 Gene3D G3DSA:3.40.50.300 3 170 4.9E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14390 8ce49a84e22e138de285fa47c4ab5853 445 Gene3D G3DSA:3.40.50.300 179 360 3.0E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14390 8ce49a84e22e138de285fa47c4ab5853 445 SUPERFAMILY SSF52540 138 441 4.41E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14390 8ce49a84e22e138de285fa47c4ab5853 445 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.1E-26 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS14390 8ce49a84e22e138de285fa47c4ab5853 445 Pfam PF01926 50S ribosome-binding GTPase 181 299 2.7E-24 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS14390 8ce49a84e22e138de285fa47c4ab5853 445 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 355 435 2.8E-26 T 09-03-2017 IPR032859 GTPase Der, C-terminal KH-domain-like NA29_RS14390 8ce49a84e22e138de285fa47c4ab5853 445 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 2.5E-19 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 NA29_RS14390 8ce49a84e22e138de285fa47c4ab5853 445 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 179 338 5.4E-25 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 NA29_RS14390 8ce49a84e22e138de285fa47c4ab5853 445 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.0E-8 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS14390 8ce49a84e22e138de285fa47c4ab5853 445 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 2.0E-8 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS14390 8ce49a84e22e138de285fa47c4ab5853 445 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 435 3.0E-173 T 09-03-2017 IPR016484 GTP-binding protein EngA GO:0005525 NA29_RS14390 8ce49a84e22e138de285fa47c4ab5853 445 PIRSF PIRSF006485 1 443 4.3E-173 T 09-03-2017 IPR016484 GTP-binding protein EngA GO:0005525 NA29_RS14390 8ce49a84e22e138de285fa47c4ab5853 445 Hamap MF_00195 GTPase Der [der]. 2 438 37.889 T 09-03-2017 IPR016484 GTP-binding protein EngA GO:0005525 NA29_RS24220 8bfd1043894a0e8c79d5f37bf4a36a9c 415 Pfam PF07690 Major Facilitator Superfamily 32 282 6.4E-37 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS24220 8bfd1043894a0e8c79d5f37bf4a36a9c 415 SUPERFAMILY SSF103473 16 412 1.7E-84 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS24220 8bfd1043894a0e8c79d5f37bf4a36a9c 415 Gene3D G3DSA:1.20.1250.20 228 410 1.4E-28 T 09-03-2017 NA29_RS24220 8bfd1043894a0e8c79d5f37bf4a36a9c 415 Gene3D G3DSA:1.20.1250.20 25 204 3.3E-34 T 09-03-2017 NA29_RS24220 8bfd1043894a0e8c79d5f37bf4a36a9c 415 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS13690 23c8cfd70ea53defd130c06bf000e68b 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 108 3.3E-11 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS13690 23c8cfd70ea53defd130c06bf000e68b 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 142 162 3.3E-11 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS13690 23c8cfd70ea53defd130c06bf000e68b 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 128 3.3E-11 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS13690 23c8cfd70ea53defd130c06bf000e68b 169 Gene3D G3DSA:1.10.10.10 28 165 3.8E-33 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13690 23c8cfd70ea53defd130c06bf000e68b 169 SMART SM00347 52 152 7.7E-20 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS13690 23c8cfd70ea53defd130c06bf000e68b 169 ProSitePatterns PS01117 MarR-type HTH domain signature. 91 125 - T 09-03-2017 IPR023187 Transcriptional regulator MarR-type, conserved site NA29_RS13690 23c8cfd70ea53defd130c06bf000e68b 169 SUPERFAMILY SSF46785 29 165 1.48E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13690 23c8cfd70ea53defd130c06bf000e68b 169 Pfam PF01047 MarR family 59 117 1.6E-13 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS17690 0ac658be4f64b5edcc4cac2b162ad997 257 Pfam PF02654 Cobalamin-5-phosphate synthase 16 250 5.4E-52 T 09-03-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 NA29_RS17690 0ac658be4f64b5edcc4cac2b162ad997 257 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 12 251 7.0E-35 T 09-03-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 NA29_RS17690 0ac658be4f64b5edcc4cac2b162ad997 257 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 257 49.707 T 09-03-2017 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 NA29_RS16590 957a2f37aa5e90b662e8b39182c12d08 289 Gene3D G3DSA:3.40.50.1820 8 258 3.4E-35 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS16590 957a2f37aa5e90b662e8b39182c12d08 289 Pfam PF12146 Serine aminopeptidase, S33 13 244 1.3E-14 T 09-03-2017 IPR022742 Serine aminopeptidase, S33 NA29_RS16590 957a2f37aa5e90b662e8b39182c12d08 289 PIRSF PIRSF017388 2 262 9.2E-41 T 09-03-2017 IPR012354 Esterase/lipase GO:0052689 NA29_RS16590 957a2f37aa5e90b662e8b39182c12d08 289 SUPERFAMILY SSF53474 10 258 3.3E-26 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS04545 11585255703cb91dec9ea1e2acd44cdd 347 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 167 318 1.1E-16 T 09-03-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 NA29_RS04545 11585255703cb91dec9ea1e2acd44cdd 347 SMART SM00859 3 141 1.1E-66 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 NA29_RS04545 11585255703cb91dec9ea1e2acd44cdd 347 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 341 41.092 T 09-03-2017 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 NA29_RS04545 11585255703cb91dec9ea1e2acd44cdd 347 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 347 1.3E-125 T 09-03-2017 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 NA29_RS04545 11585255703cb91dec9ea1e2acd44cdd 347 Gene3D G3DSA:3.40.50.720 1 155 3.8E-65 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS04545 11585255703cb91dec9ea1e2acd44cdd 347 SUPERFAMILY SSF51735 2 164 1.04E-55 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS04545 11585255703cb91dec9ea1e2acd44cdd 347 SUPERFAMILY SSF55347 149 315 1.44E-46 T 09-03-2017 NA29_RS04545 11585255703cb91dec9ea1e2acd44cdd 347 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 141 5.9E-40 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 NA29_RS04545 11585255703cb91dec9ea1e2acd44cdd 347 Gene3D G3DSA:3.30.360.10 156 315 1.2E-53 T 09-03-2017 NA29_RS10735 7f7a384bc41c69a29f57971ac99f4458 386 Pfam PF05175 Methyltransferase small domain 206 322 3.5E-12 T 09-03-2017 IPR007848 Methyltransferase small domain GO:0008168 NA29_RS10735 7f7a384bc41c69a29f57971ac99f4458 386 SUPERFAMILY SSF53335 169 323 2.56E-28 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS10735 7f7a384bc41c69a29f57971ac99f4458 386 Gene3D G3DSA:3.40.50.150 180 348 1.4E-29 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS10735 7f7a384bc41c69a29f57971ac99f4458 386 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 273 279 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NA29_RS06905 7fe0264f84eaf16db7f3a28c313ee629 1067 Gene3D G3DSA:2.40.50.140 959 1040 3.8E-5 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS06905 7fe0264f84eaf16db7f3a28c313ee629 1067 Pfam PF02811 PHP domain 6 146 2.5E-13 T 09-03-2017 IPR004013 PHP domain GO:0003824 NA29_RS06905 7fe0264f84eaf16db7f3a28c313ee629 1067 Gene3D G3DSA:3.20.20.140 5 106 1.6E-7 T 09-03-2017 NA29_RS06905 7fe0264f84eaf16db7f3a28c313ee629 1067 Pfam PF01336 OB-fold nucleic acid binding domain 977 1044 3.0E-6 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 NA29_RS06905 7fe0264f84eaf16db7f3a28c313ee629 1067 SMART SM00481 5 75 1.1E-8 T 09-03-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 NA29_RS06905 7fe0264f84eaf16db7f3a28c313ee629 1067 Pfam PF14579 Helix-hairpin-helix motif 797 891 8.4E-19 T 09-03-2017 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS06905 7fe0264f84eaf16db7f3a28c313ee629 1067 Gene3D G3DSA:1.10.150.280 832 875 8.4E-4 T 09-03-2017 NA29_RS06905 7fe0264f84eaf16db7f3a28c313ee629 1067 SUPERFAMILY SSF89550 4 99 8.44E-8 T 09-03-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 NA29_RS06905 7fe0264f84eaf16db7f3a28c313ee629 1067 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 4 1067 13.533 T 09-03-2017 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS06905 7fe0264f84eaf16db7f3a28c313ee629 1067 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 299 723 2.8E-148 T 09-03-2017 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS06905 7fe0264f84eaf16db7f3a28c313ee629 1067 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1012 3.1E-161 T 09-03-2017 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS14670 451c535cb99dc206ef9886f82944ee4e 269 Gene3D G3DSA:1.10.3130.10 1 61 3.0E-26 T 09-03-2017 NA29_RS14670 451c535cb99dc206ef9886f82944ee4e 269 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 5.9E-6 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS14670 451c535cb99dc206ef9886f82944ee4e 269 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 151 1.4E-5 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS14670 451c535cb99dc206ef9886f82944ee4e 269 Gene3D G3DSA:2.160.10.10 62 176 3.0E-35 T 09-03-2017 NA29_RS14670 451c535cb99dc206ef9886f82944ee4e 269 SUPERFAMILY SSF51161 2 171 1.39E-54 T 09-03-2017 IPR011004 Trimeric LpxA-like NA29_RS14670 451c535cb99dc206ef9886f82944ee4e 269 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 167 8.3E-72 T 09-03-2017 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 NA29_RS14395 c38ff1afc6727a34d9dd1b9572b6dcb1 386 Gene3D G3DSA:2.140.10.10 18 385 5.2E-65 T 09-03-2017 IPR027295 Quinoprotein alcohol dehydrogenase-like domain NA29_RS14395 c38ff1afc6727a34d9dd1b9572b6dcb1 386 Pfam PF13570 PQQ-like domain 353 386 0.0023 T 09-03-2017 IPR025666 Pyrrolo-quinoline quinone-like domain NA29_RS14395 c38ff1afc6727a34d9dd1b9572b6dcb1 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 10 385 36.154 T 09-03-2017 IPR017687 Outer membrane protein assembly factor BamB NA29_RS14395 c38ff1afc6727a34d9dd1b9572b6dcb1 386 SUPERFAMILY SSF50998 39 374 7.85E-67 T 09-03-2017 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily NA29_RS14395 c38ff1afc6727a34d9dd1b9572b6dcb1 386 Pfam PF13360 PQQ-like domain 82 313 8.1E-53 T 09-03-2017 IPR002372 Pyrrolo-quinoline quinone repeat NA29_RS14395 c38ff1afc6727a34d9dd1b9572b6dcb1 386 SMART SM00564 282 314 32.0 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NA29_RS14395 c38ff1afc6727a34d9dd1b9572b6dcb1 386 SMART SM00564 108 139 330.0 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NA29_RS14395 c38ff1afc6727a34d9dd1b9572b6dcb1 386 SMART SM00564 186 225 4.8 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NA29_RS14395 c38ff1afc6727a34d9dd1b9572b6dcb1 386 SMART SM00564 148 179 0.36 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NA29_RS14395 c38ff1afc6727a34d9dd1b9572b6dcb1 386 SMART SM00564 69 100 0.42 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NA29_RS14395 c38ff1afc6727a34d9dd1b9572b6dcb1 386 SMART SM00564 324 355 0.074 T 09-03-2017 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat NA29_RS14395 c38ff1afc6727a34d9dd1b9572b6dcb1 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 15 383 3.8E-127 T 09-03-2017 IPR017687 Outer membrane protein assembly factor BamB NA29_RS22475 500815919eab4c544949c347f13aff95 512 SUPERFAMILY SSF53623 108 343 1.44E-76 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS22475 500815919eab4c544949c347f13aff95 512 SUPERFAMILY SSF63418 27 106 1.7E-15 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 NA29_RS22475 500815919eab4c544949c347f13aff95 512 SUPERFAMILY SSF53244 345 501 7.48E-46 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS22475 500815919eab4c544949c347f13aff95 512 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 27 500 2.9E-149 T 09-03-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 NA29_RS22475 500815919eab4c544949c347f13aff95 512 Pfam PF02875 Mur ligase family, glutamate ligase domain 345 433 6.5E-23 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS22475 500815919eab4c544949c347f13aff95 512 Pfam PF08245 Mur ligase middle domain 117 325 7.5E-54 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS22475 500815919eab4c544949c347f13aff95 512 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 6 500 33.365 T 09-03-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 NA29_RS22475 500815919eab4c544949c347f13aff95 512 Gene3D G3DSA:3.40.1190.10 111 348 8.3E-83 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS22475 500815919eab4c544949c347f13aff95 512 Gene3D G3DSA:3.90.190.20 349 494 1.8E-54 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS22475 500815919eab4c544949c347f13aff95 512 Gene3D G3DSA:3.40.1390.10 27 106 6.5E-16 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 NA29_RS11995 0baa9c83af35d3932cb2ff03a70b89c0 331 Gene3D G3DSA:3.90.180.10 1 169 2.7E-59 T 09-03-2017 IPR011032 GroES-like NA29_RS11995 0baa9c83af35d3932cb2ff03a70b89c0 331 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 1.4E-33 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NA29_RS11995 0baa9c83af35d3932cb2ff03a70b89c0 331 TIGRFAM TIGR02822 adh_fam_2: zinc-binding alcohol dehydrogenase family protein 10 325 3.6E-109 T 09-03-2017 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 NA29_RS11995 0baa9c83af35d3932cb2ff03a70b89c0 331 SUPERFAMILY SSF51735 138 292 8.26E-22 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11995 0baa9c83af35d3932cb2ff03a70b89c0 331 SMART SM00829 11 325 0.0019 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NA29_RS11995 0baa9c83af35d3932cb2ff03a70b89c0 331 SUPERFAMILY SSF50129 1 157 1.67E-52 T 09-03-2017 IPR011032 GroES-like NA29_RS11995 0baa9c83af35d3932cb2ff03a70b89c0 331 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 09-03-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 NA29_RS11995 0baa9c83af35d3932cb2ff03a70b89c0 331 Gene3D G3DSA:3.40.50.720 170 291 9.9E-8 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF52777 2254 2438 3.56E-32 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:1.10.1200.10 3242 3301 3.5E-21 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:1.10.1200.10 622 698 5.2E-19 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:1.10.1200.10 1718 1780 8.2E-22 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:1.10.1200.10 4311 4376 1.0E-27 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:2.30.38.10 402 482 1.9E-16 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:3.30.300.30 4190 4310 2.8E-41 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:3.30.300.30 1606 1717 5.5E-29 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:3.30.300.30 3117 3241 3.7E-26 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:3.40.50.980 3791 3945 6.5E-48 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:3.40.50.980 2725 2886 3.3E-39 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF47336 3234 3296 7.98E-15 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF52777 1979 2216 1.67E-22 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Pfam PF00550 Phosphopantetheine attachment site 3236 3296 1.1E-11 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Pfam PF00550 Phosphopantetheine attachment site 1718 1776 8.4E-10 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Pfam PF00550 Phosphopantetheine attachment site 4309 4372 1.4E-13 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Pfam PF00550 Phosphopantetheine attachment site 633 695 1.7E-11 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF52777 3517 3760 2.56E-53 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF47336 1708 1776 8.24E-15 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF52777 3327 3510 8.45E-41 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2748 3146 3.2E-111 T 09-03-2017 IPR010071 Amino acid adenylation domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1228 1634 2.1E-110 T 09-03-2017 IPR010071 Amino acid adenylation domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3817 4218 7.1E-134 T 09-03-2017 IPR010071 Amino acid adenylation domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1347 1358 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:3.40.50.980 1352 1505 4.0E-30 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:3.40.50.980 3946 4104 3.6E-47 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:3.40.50.980 203 363 2.7E-33 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF52777 1791 1991 1.33E-35 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF56801 1197 1727 6.93E-131 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3936 3947 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:3.40.50.980 2903 3034 1.5E-24 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF56801 3788 4320 9.16E-159 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2862 2873 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:3.30.300.30 483 589 4.4E-11 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1738 1753 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF52777 732 907 5.56E-39 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4331 4346 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF56801 2721 3245 5.49E-124 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF52777 2441 2697 1.04E-50 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Pfam PF00501 AMP-binding enzyme 2725 3122 1.9E-78 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Pfam PF00501 AMP-binding enzyme 36 491 1.3E-77 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Pfam PF00501 AMP-binding enzyme 3797 4194 1.8E-97 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Pfam PF00501 AMP-binding enzyme 1209 1611 1.2E-76 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF47336 4300 4372 6.54E-19 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:2.30.38.10 3035 3111 4.5E-24 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:2.30.38.10 4105 4183 2.1E-21 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:2.30.38.10 1521 1600 3.4E-21 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3258 3273 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Pfam PF13745 HxxPF-repeated domain 1048 1155 7.5E-18 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Pfam PF13745 HxxPF-repeated domain 3651 3743 2.5E-24 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SMART SM00823 Phosphopantetheine attachment site 1714 1782 0.009 T 09-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SMART SM00823 Phosphopantetheine attachment site 4307 4376 0.0037 T 09-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SMART SM00823 Phosphopantetheine attachment site 3234 3302 0.0016 T 09-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SMART SM00823 Phosphopantetheine attachment site 631 700 0.33 T 09-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Pfam PF13193 AMP-binding enzyme C-terminal domain 4202 4282 2.3E-13 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Pfam PF13193 AMP-binding enzyme C-terminal domain 1619 1690 1.6E-6 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:3.40.50.980 1202 1351 7.4E-44 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Gene3D G3DSA:3.40.50.980 31 202 3.4E-30 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Pfam PF00668 Condensation domain 1795 2091 2.6E-45 T 09-03-2017 IPR001242 Condensation domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Pfam PF00668 Condensation domain 731 1026 8.9E-56 T 09-03-2017 IPR001242 Condensation domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Pfam PF00668 Condensation domain 2248 2558 8.9E-48 T 09-03-2017 IPR001242 Condensation domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 Pfam PF00668 Condensation domain 3322 3629 1.5E-63 T 09-03-2017 IPR001242 Condensation domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 ProSitePatterns PS00012 Phosphopantetheine attachment site. 655 670 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 ProSitePatterns PS00455 Putative AMP-binding domain signature. 197 208 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF52777 915 1174 8.67E-43 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF47336 626 696 1.83E-14 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF56801 397 595 7.2E-107 T 09-03-2017 NA29_RS08575 8ee96c877c2124aecef1335ab1315a8a 4425 SUPERFAMILY SSF56801 24 369 7.2E-107 T 09-03-2017 NA29_RS21945 0f89e2f23d4386d1625e3828d3f3702f 194 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 16 155 3.2E-45 T 09-03-2017 IPR006543 Histidinol-phosphate phosphatase GO:0016791 NA29_RS21945 0f89e2f23d4386d1625e3828d3f3702f 194 PIRSF PIRSF004682 8 192 5.5E-52 T 09-03-2017 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 NA29_RS21945 0f89e2f23d4386d1625e3828d3f3702f 194 Gene3D G3DSA:3.40.50.1000 12 185 8.5E-53 T 09-03-2017 IPR023214 HAD-like domain NA29_RS21945 0f89e2f23d4386d1625e3828d3f3702f 194 Pfam PF00702 haloacid dehalogenase-like hydrolase 26 151 7.0E-10 T 09-03-2017 NA29_RS21945 0f89e2f23d4386d1625e3828d3f3702f 194 SUPERFAMILY SSF56784 14 186 6.31E-45 T 09-03-2017 IPR023214 HAD-like domain NA29_RS21945 0f89e2f23d4386d1625e3828d3f3702f 194 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 15 154 2.1E-33 T 09-03-2017 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 NA29_RS16245 2012bd037a3101ccb586d949321d5477 263 Gene3D G3DSA:1.10.10.60 214 257 7.3E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS16245 2012bd037a3101ccb586d949321d5477 263 SUPERFAMILY SSF46689 213 257 8.96E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS16245 2012bd037a3101ccb586d949321d5477 263 SUPERFAMILY SSF51182 7 183 1.42E-13 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS16245 2012bd037a3101ccb586d949321d5477 263 Gene3D G3DSA:2.60.120.10 17 91 3.3E-12 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS16245 2012bd037a3101ccb586d949321d5477 263 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 3.0E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS16245 2012bd037a3101ccb586d949321d5477 263 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 3.0E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS16245 2012bd037a3101ccb586d949321d5477 263 Pfam PF02311 AraC-like ligand binding domain 27 143 2.3E-9 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS16245 2012bd037a3101ccb586d949321d5477 263 SMART SM00342 176 258 2.6E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS16245 2012bd037a3101ccb586d949321d5477 263 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 213 254 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS16245 2012bd037a3101ccb586d949321d5477 263 Gene3D G3DSA:1.10.10.60 157 213 3.1E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS16245 2012bd037a3101ccb586d949321d5477 263 Pfam PF12833 Helix-turn-helix domain 184 258 3.3E-21 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS12075 93372425b248d91c349a7141042166f3 159 Pfam PF07080 Protein of unknown function (DUF1348) 8 149 4.1E-71 T 09-03-2017 IPR009783 Protein of unknown function DUF1348 NA29_RS12075 93372425b248d91c349a7141042166f3 159 Gene3D G3DSA:3.10.450.50 15 158 6.5E-74 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS12075 93372425b248d91c349a7141042166f3 159 SUPERFAMILY SSF54427 7 159 1.98E-77 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS12860 94b5332cf0cc52ca719b4441af26323f 432 SUPERFAMILY SSF56931 193 432 8.63E-60 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 NA29_RS12860 94b5332cf0cc52ca719b4441af26323f 432 Gene3D G3DSA:2.40.230.10 210 432 5.8E-61 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 NA29_RS12860 94b5332cf0cc52ca719b4441af26323f 432 Pfam PF02253 Phospholipase A1 213 427 1.5E-41 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 NA29_RS12860 94b5332cf0cc52ca719b4441af26323f 432 PRINTS PR01486 Bacterial phospholipase A1 protein signature 401 421 1.4E-15 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 NA29_RS12860 94b5332cf0cc52ca719b4441af26323f 432 PRINTS PR01486 Bacterial phospholipase A1 protein signature 211 228 1.4E-15 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 NA29_RS12860 94b5332cf0cc52ca719b4441af26323f 432 PRINTS PR01486 Bacterial phospholipase A1 protein signature 258 277 1.4E-15 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 NA29_RS12860 94b5332cf0cc52ca719b4441af26323f 432 PRINTS PR01486 Bacterial phospholipase A1 protein signature 304 322 1.4E-15 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 NA29_RS12860 94b5332cf0cc52ca719b4441af26323f 432 PRINTS PR01486 Bacterial phospholipase A1 protein signature 340 358 1.4E-15 T 09-03-2017 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 NA29_RS11715 1c338f9fbd38275c2bf565261fdb953d 152 Pfam PF06841 T4-like virus tail tube protein gp19 17 148 9.9E-45 T 09-03-2017 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 NA29_RS11715 1c338f9fbd38275c2bf565261fdb953d 152 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 14 149 5.2E-39 T 09-03-2017 IPR011747 Conserved hypothetical protein CHP02241 NA29_RS09795 e9a3d4334322f16f969edd9bafa8e899 176 Gene3D G3DSA:1.10.10.10 6 145 2.0E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS09795 e9a3d4334322f16f969edd9bafa8e899 176 Pfam PF01047 MarR family 40 98 2.3E-15 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS09795 e9a3d4334322f16f969edd9bafa8e899 176 SUPERFAMILY SSF46785 12 146 2.83E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS09795 e9a3d4334322f16f969edd9bafa8e899 176 SMART SM00347 33 133 4.0E-15 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS03610 0e36b46205696370b040dbd032f5697b 311 SMART SM00849 71 282 4.4E-17 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS03610 0e36b46205696370b040dbd032f5697b 311 Gene3D G3DSA:3.60.15.10 12 299 4.4E-41 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS03610 0e36b46205696370b040dbd032f5697b 311 SUPERFAMILY SSF56281 74 299 1.31E-33 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS03610 0e36b46205696370b040dbd032f5697b 311 Pfam PF00753 Metallo-beta-lactamase superfamily 75 248 1.7E-19 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS00480 e5542626a3eaca4af681fd653efad559 549 SMART SM00283 271 539 1.4E-48 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS00480 e5542626a3eaca4af681fd653efad559 549 SUPERFAMILY SSF58104 231 541 3.79E-66 T 09-03-2017 NA29_RS00480 e5542626a3eaca4af681fd653efad559 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 538 1.4E-41 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS00480 e5542626a3eaca4af681fd653efad559 549 Pfam PF00672 HAMP domain 192 259 9.0E-14 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS00480 e5542626a3eaca4af681fd653efad559 549 SMART SM00304 211 263 2.2E-10 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS00480 e5542626a3eaca4af681fd653efad559 549 Gene3D G3DSA:1.10.287.950 297 511 4.4E-48 T 09-03-2017 NA29_RS00480 e5542626a3eaca4af681fd653efad559 549 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 181 1.2E-17 T 09-03-2017 IPR024478 4HB MCP domain NA29_RS11800 6d06fac1fa3f8a690854122842752799 304 Gene3D G3DSA:3.40.190.10 101 188 6.9E-13 T 09-03-2017 NA29_RS11800 6d06fac1fa3f8a690854122842752799 304 Pfam PF03466 LysR substrate binding domain 99 303 2.9E-27 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS11800 6d06fac1fa3f8a690854122842752799 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 72 1.6E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11800 6d06fac1fa3f8a690854122842752799 304 Gene3D G3DSA:3.40.190.10 189 273 2.7E-13 T 09-03-2017 NA29_RS11800 6d06fac1fa3f8a690854122842752799 304 SUPERFAMILY SSF46785 12 108 8.84E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11800 6d06fac1fa3f8a690854122842752799 304 Gene3D G3DSA:1.10.10.10 13 93 5.2E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11800 6d06fac1fa3f8a690854122842752799 304 SUPERFAMILY SSF53850 99 303 3.6E-29 T 09-03-2017 NA29_RS12680 bbd2063969d90117f94422c9c21123ef 144 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 4.0E-24 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS12680 bbd2063969d90117f94422c9c21123ef 144 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 3.3E-28 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS12680 bbd2063969d90117f94422c9c21123ef 144 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 131 2.5E-41 T 09-03-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS12680 bbd2063969d90117f94422c9c21123ef 144 SUPERFAMILY SSF46604 88 136 7.32E-11 T 09-03-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 NA29_RS12680 bbd2063969d90117f94422c9c21123ef 144 SUPERFAMILY SSF51344 3 85 4.97E-23 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS12680 bbd2063969d90117f94422c9c21123ef 144 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 2.6E-9 T 09-03-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 NA29_RS12680 bbd2063969d90117f94422c9c21123ef 144 Gene3D G3DSA:2.60.15.10 4 90 1.1E-29 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS12680 bbd2063969d90117f94422c9c21123ef 144 Gene3D G3DSA:1.20.5.440 91 132 1.7E-13 T 09-03-2017 NA29_RS12680 bbd2063969d90117f94422c9c21123ef 144 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 21.987 T 09-03-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 Pfam PF01926 50S ribosome-binding GTPase 229 343 9.1E-25 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 227 376 1.7E-26 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 Gene3D G3DSA:3.40.50.300 298 385 3.0E-8 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 8 464 31.951 T 09-03-2017 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 PRINTS PR00449 Transforming protein P21 ras signature 333 346 2.6E-5 T 09-03-2017 NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 PRINTS PR00449 Transforming protein P21 ras signature 228 249 2.6E-5 T 09-03-2017 NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 PRINTS PR00449 Transforming protein P21 ras signature 268 290 2.6E-5 T 09-03-2017 NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 Gene3D G3DSA:1.20.120.430 258 282 6.4E-55 T 09-03-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 Gene3D G3DSA:1.20.120.430 133 193 6.4E-55 T 09-03-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 Gene3D G3DSA:1.20.120.430 393 464 6.4E-55 T 09-03-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 Gene3D G3DSA:3.30.1360.120 7 132 9.9E-38 T 09-03-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 14 464 4.0E-100 T 09-03-2017 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 Pfam PF10396 GTP-binding protein TrmE N-terminus 9 131 1.2E-33 T 09-03-2017 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 SUPERFAMILY SSF52540 208 381 7.79E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 SUPERFAMILY SSF52540 80 174 7.79E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 Gene3D G3DSA:3.40.50.300 226 257 5.1E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 SUPERFAMILY SSF116878 388 464 1.96E-48 T 09-03-2017 NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 SUPERFAMILY SSF116878 132 231 1.96E-48 T 09-03-2017 NA29_RS25395 9b1928aebaf7f37fb177b337c30afc5b 464 Pfam PF12631 MnmE helical domain 134 461 9.2E-57 T 09-03-2017 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 NA29_RS22495 723de727387ad195e2f99994f7c3b000 142 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 121 4.0E-58 T 09-03-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 NA29_RS22495 723de727387ad195e2f99994f7c3b000 142 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 140 2.8E-34 T 09-03-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 NA29_RS22495 723de727387ad195e2f99994f7c3b000 142 SUPERFAMILY SSF89447 2 129 6.65E-39 T 09-03-2017 NA29_RS22495 723de727387ad195e2f99994f7c3b000 142 Pfam PF02381 MraZ protein, putative antitoxin-like 73 127 7.9E-14 T 09-03-2017 IPR020603 MraZ domain NA29_RS22495 723de727387ad195e2f99994f7c3b000 142 Pfam PF02381 MraZ protein, putative antitoxin-like 2 67 6.6E-13 T 09-03-2017 IPR020603 MraZ domain NA29_RS22495 723de727387ad195e2f99994f7c3b000 142 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 142 50.314 T 09-03-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 NA29_RS11895 3acb55ea0f14296ab6a5a9c30fa053f3 307 Gene3D G3DSA:3.10.310.10 21 142 3.2E-30 T 09-03-2017 NA29_RS11895 3acb55ea0f14296ab6a5a9c30fa053f3 307 PIRSF PIRSF016184 17 303 4.0E-58 T 09-03-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 NA29_RS11895 3acb55ea0f14296ab6a5a9c30fa053f3 307 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 22 296 1.9E-46 T 09-03-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 NA29_RS11895 3acb55ea0f14296ab6a5a9c30fa053f3 307 Pfam PF02567 Phenazine biosynthesis-like protein 24 283 3.6E-41 T 09-03-2017 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 NA29_RS11895 3acb55ea0f14296ab6a5a9c30fa053f3 307 Gene3D G3DSA:3.10.310.10 143 286 1.5E-33 T 09-03-2017 NA29_RS11895 3acb55ea0f14296ab6a5a9c30fa053f3 307 SUPERFAMILY SSF54506 21 299 5.95E-52 T 09-03-2017 NA29_RS19880 2e464afc113a1a2b79ea0f7a853f6cc3 224 SUPERFAMILY SSF102712 145 194 3.14E-5 T 09-03-2017 NA29_RS19880 2e464afc113a1a2b79ea0f7a853f6cc3 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 1.1E-69 T 09-03-2017 IPR001405 RadC protein NA29_RS19880 2e464afc113a1a2b79ea0f7a853f6cc3 224 Gene3D G3DSA:3.40.140.10 103 222 1.4E-44 T 09-03-2017 NA29_RS19880 2e464afc113a1a2b79ea0f7a853f6cc3 224 SUPERFAMILY SSF47781 17 89 8.34E-7 T 09-03-2017 IPR010994 RuvA domain 2-like NA29_RS19880 2e464afc113a1a2b79ea0f7a853f6cc3 224 Pfam PF04002 RadC-like JAB domain 104 221 1.1E-42 T 09-03-2017 IPR025657 RadC-like JAB domain NA29_RS19880 2e464afc113a1a2b79ea0f7a853f6cc3 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 09-03-2017 IPR020891 Uncharacterised protein family UPF0758, conserved site NA29_RS09250 c09177a662309c45dd6f95a981fc9540 110 Pfam PF06127 Protein of unknown function (DUF962) 15 107 1.0E-36 T 09-03-2017 IPR009305 Protein of unknown function DUF962 NA29_RS08710 5d5c0de7fdd4dfb2d615c15e8d47fa74 584 SUPERFAMILY SSF46977 453 565 2.88E-26 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS08710 5d5c0de7fdd4dfb2d615c15e8d47fa74 584 PIRSF PIRSF000171 1 571 1.0E-35 T 09-03-2017 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS08710 5d5c0de7fdd4dfb2d615c15e8d47fa74 584 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 374 389 3.1E-5 T 09-03-2017 NA29_RS08710 5d5c0de7fdd4dfb2d615c15e8d47fa74 584 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.1E-5 T 09-03-2017 NA29_RS08710 5d5c0de7fdd4dfb2d615c15e8d47fa74 584 Gene3D G3DSA:3.50.50.60 346 401 4.3E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08710 5d5c0de7fdd4dfb2d615c15e8d47fa74 584 Gene3D G3DSA:3.50.50.60 3 238 4.3E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08710 5d5c0de7fdd4dfb2d615c15e8d47fa74 584 Pfam PF00890 FAD binding domain 7 380 3.8E-29 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS08710 5d5c0de7fdd4dfb2d615c15e8d47fa74 584 SUPERFAMILY SSF51905 2 246 1.23E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08710 5d5c0de7fdd4dfb2d615c15e8d47fa74 584 SUPERFAMILY SSF51905 354 406 1.23E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08710 5d5c0de7fdd4dfb2d615c15e8d47fa74 584 Gene3D G3DSA:1.20.58.100 444 539 6.4E-21 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS08710 5d5c0de7fdd4dfb2d615c15e8d47fa74 584 Pfam PF02910 Fumarate reductase flavoprotein C-term 455 554 7.4E-18 T 09-03-2017 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS09385 47b3464eb93f24448de922b548a48ebc 751 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 324 482 2.4E-32 T 09-03-2017 IPR000160 GGDEF domain NA29_RS09385 47b3464eb93f24448de922b548a48ebc 751 SMART SM00052 493 739 1.1E-103 T 09-03-2017 IPR001633 EAL domain NA29_RS09385 47b3464eb93f24448de922b548a48ebc 751 SUPERFAMILY SSF141868 498 745 1.7E-82 T 09-03-2017 IPR001633 EAL domain NA29_RS09385 47b3464eb93f24448de922b548a48ebc 751 Gene3D G3DSA:3.30.450.20 106 183 4.6E-11 T 09-03-2017 NA29_RS09385 47b3464eb93f24448de922b548a48ebc 751 Pfam PF00990 Diguanylate cyclase, GGDEF domain 324 477 8.0E-38 T 09-03-2017 IPR000160 GGDEF domain NA29_RS09385 47b3464eb93f24448de922b548a48ebc 751 Gene3D G3DSA:3.20.20.450 497 743 3.6E-90 T 09-03-2017 IPR001633 EAL domain NA29_RS09385 47b3464eb93f24448de922b548a48ebc 751 Pfam PF00563 EAL domain 499 734 1.0E-66 T 09-03-2017 IPR001633 EAL domain NA29_RS09385 47b3464eb93f24448de922b548a48ebc 751 SUPERFAMILY SSF55073 328 485 3.92E-40 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS09385 47b3464eb93f24448de922b548a48ebc 751 SMART SM00267 312 483 5.5E-49 T 09-03-2017 IPR000160 GGDEF domain NA29_RS09385 47b3464eb93f24448de922b548a48ebc 751 Gene3D G3DSA:3.30.70.270 325 491 3.4E-48 T 09-03-2017 NA29_RS04560 d9104202037960ee141447fbc45e8d06 457 Pfam PF01551 Peptidase family M23 319 415 6.3E-31 T 09-03-2017 IPR016047 Peptidase M23 NA29_RS04560 d9104202037960ee141447fbc45e8d06 457 SUPERFAMILY SSF51261 169 416 1.83E-66 T 09-03-2017 IPR011055 Duplicated hybrid motif NA29_RS04560 d9104202037960ee141447fbc45e8d06 457 Gene3D G3DSA:2.70.70.10 279 416 1.6E-45 T 09-03-2017 NA29_RS17255 fcf194c3b5ff519c996fed3b050a2c82 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 5.4E-5 T 09-03-2017 NA29_RS17255 fcf194c3b5ff519c996fed3b050a2c82 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 293 5.4E-5 T 09-03-2017 NA29_RS17255 fcf194c3b5ff519c996fed3b050a2c82 410 Gene3D G3DSA:3.50.50.60 140 176 2.1E-5 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17255 fcf194c3b5ff519c996fed3b050a2c82 410 Gene3D G3DSA:3.50.50.60 187 264 1.1E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17255 fcf194c3b5ff519c996fed3b050a2c82 410 Gene3D G3DSA:3.50.50.60 353 410 1.1E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17255 fcf194c3b5ff519c996fed3b050a2c82 410 Gene3D G3DSA:3.50.50.60 2 59 1.1E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17255 fcf194c3b5ff519c996fed3b050a2c82 410 Gene3D G3DSA:3.50.50.60 109 131 1.1E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17255 fcf194c3b5ff519c996fed3b050a2c82 410 SUPERFAMILY SSF51905 3 55 6.09E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17255 fcf194c3b5ff519c996fed3b050a2c82 410 SUPERFAMILY SSF51905 108 265 6.09E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17255 fcf194c3b5ff519c996fed3b050a2c82 410 SUPERFAMILY SSF51905 353 410 6.09E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17255 fcf194c3b5ff519c996fed3b050a2c82 410 Pfam PF01266 FAD dependent oxidoreductase 4 392 3.6E-52 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS17255 fcf194c3b5ff519c996fed3b050a2c82 410 SUPERFAMILY SSF54373 266 353 3.33E-7 T 09-03-2017 NA29_RS02475 36f9b650eecea3bfd858a214e998017b 306 SUPERFAMILY SSF53335 20 271 3.19E-34 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS02475 36f9b650eecea3bfd858a214e998017b 306 Pfam PF08241 Methyltransferase domain 59 164 3.1E-18 T 09-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NA29_RS02475 36f9b650eecea3bfd858a214e998017b 306 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 14 281 28.153 T 09-03-2017 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 NA29_RS02475 36f9b650eecea3bfd858a214e998017b 306 Gene3D G3DSA:3.40.50.150 20 281 2.2E-33 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS19465 4d9805a78fb8e1f60fc4cd4038206d80 298 SUPERFAMILY SSF161098 59 285 2.22E-52 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS19465 4d9805a78fb8e1f60fc4cd4038206d80 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 293 2.6E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS19465 4d9805a78fb8e1f60fc4cd4038206d80 298 Gene3D G3DSA:1.10.3720.10 65 294 4.3E-55 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS10575 c6938ba39da8ce92330c8d13787ce543 258 SMART SM00079 28 250 6.1E-4 T 09-03-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 NA29_RS10575 c6938ba39da8ce92330c8d13787ce543 258 Gene3D G3DSA:3.40.190.10 115 210 7.7E-16 T 09-03-2017 NA29_RS10575 c6938ba39da8ce92330c8d13787ce543 258 SMART SM00062 28 251 6.2E-53 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS10575 c6938ba39da8ce92330c8d13787ce543 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 249 2.1E-58 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS10575 c6938ba39da8ce92330c8d13787ce543 258 Gene3D G3DSA:3.40.190.10 211 252 8.5E-41 T 09-03-2017 NA29_RS10575 c6938ba39da8ce92330c8d13787ce543 258 Gene3D G3DSA:3.40.190.10 26 114 8.5E-41 T 09-03-2017 NA29_RS10575 c6938ba39da8ce92330c8d13787ce543 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 51 64 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 NA29_RS10575 c6938ba39da8ce92330c8d13787ce543 258 SUPERFAMILY SSF53850 7 252 2.72E-62 T 09-03-2017 NA29_RS10285 6a092c01391d0c63894b22cde86a08b4 253 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 147 247 3.7E-29 T 09-03-2017 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 NA29_RS10285 6a092c01391d0c63894b22cde86a08b4 253 SUPERFAMILY SSF63848 146 250 1.27E-30 T 09-03-2017 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 NA29_RS10285 6a092c01391d0c63894b22cde86a08b4 253 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 8 251 24.649 T 09-03-2017 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 NA29_RS10285 6a092c01391d0c63894b22cde86a08b4 253 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 10 105 2.5E-10 T 09-03-2017 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 NA29_RS10285 6a092c01391d0c63894b22cde86a08b4 253 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 9 250 3.7E-50 T 09-03-2017 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 NA29_RS10285 6a092c01391d0c63894b22cde86a08b4 253 Gene3D G3DSA:2.160.20.70 134 250 5.9E-37 T 09-03-2017 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 NA29_RS23710 e721fd583880d385aa797dad5d67b73b 218 SUPERFAMILY SSF46626 31 119 1.38E-23 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS23710 e721fd583880d385aa797dad5d67b73b 218 PIRSF PIRSF000005 5 218 4.1E-63 T 09-03-2017 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 NA29_RS23710 e721fd583880d385aa797dad5d67b73b 218 Pfam PF00034 Cytochrome c 39 119 4.1E-13 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS23710 e721fd583880d385aa797dad5d67b73b 218 PRINTS PR00605 Class IC cytochrome C signature 192 214 5.9E-6 T 09-03-2017 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 NA29_RS23710 e721fd583880d385aa797dad5d67b73b 218 PRINTS PR00605 Class IC cytochrome C signature 47 58 5.9E-6 T 09-03-2017 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 NA29_RS23710 e721fd583880d385aa797dad5d67b73b 218 SUPERFAMILY SSF46626 130 216 6.26E-22 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS23710 e721fd583880d385aa797dad5d67b73b 218 Gene3D G3DSA:1.10.760.10 146 217 6.6E-25 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS23710 e721fd583880d385aa797dad5d67b73b 218 Gene3D G3DSA:1.10.760.10 39 145 4.5E-31 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS23710 e721fd583880d385aa797dad5d67b73b 218 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 150 214 1.9E-8 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS11510 8527757463a689987f17a7809dfce1c8 310 SUPERFAMILY SSF53850 10 227 5.68E-44 T 09-03-2017 NA29_RS11510 8527757463a689987f17a7809dfce1c8 310 Pfam PF09084 NMT1/THI5 like 45 175 3.0E-17 T 09-03-2017 IPR015168 SsuA/THI5-like NA29_RS11510 8527757463a689987f17a7809dfce1c8 310 Gene3D G3DSA:3.40.190.10 90 190 5.5E-23 T 09-03-2017 NA29_RS11510 8527757463a689987f17a7809dfce1c8 310 SMART SM00062 12 225 2.3E-4 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS11510 8527757463a689987f17a7809dfce1c8 310 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 14 293 4.7E-65 T 09-03-2017 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 NA29_RS05310 efae320eb4e76b61997e86baf08c541c 196 SUPERFAMILY SSF47413 2 72 1.07E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS05310 efae320eb4e76b61997e86baf08c541c 196 SUPERFAMILY SSF51182 51 183 3.2E-20 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS05310 efae320eb4e76b61997e86baf08c541c 196 Pfam PF13560 Helix-turn-helix domain 6 63 1.6E-13 T 09-03-2017 NA29_RS05310 efae320eb4e76b61997e86baf08c541c 196 Gene3D G3DSA:1.10.260.40 1 72 5.2E-23 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS05310 efae320eb4e76b61997e86baf08c541c 196 SMART SM00530 10 65 1.2E-14 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS05310 efae320eb4e76b61997e86baf08c541c 196 Gene3D G3DSA:2.60.120.10 73 182 5.9E-15 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS20670 a8ecfcd83212e492762a8c0f61b1e68e 275 Pfam PF13317 Protein of unknown function (DUF4088) 16 240 1.5E-108 T 09-03-2017 IPR025146 Protein of unknown function DUF4088 NA29_RS02515 f05ccbaf085fb3dc462d69336d246640 214 Gene3D G3DSA:2.30.110.10 12 192 2.8E-56 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS02515 f05ccbaf085fb3dc462d69336d246640 214 Pfam PF01613 Flavin reductase like domain 22 168 5.3E-18 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS02515 f05ccbaf085fb3dc462d69336d246640 214 SMART SM00903 19 179 1.5E-12 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS02515 f05ccbaf085fb3dc462d69336d246640 214 SUPERFAMILY SSF50475 3 192 5.89E-42 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS04585 6f545259d23cfea57b69d34f7e03892d 328 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 68 299 2.5E-53 T 09-03-2017 IPR018713 Domain of unknown function DUF2236 NA29_RS19365 020ecccfd556cddeeacd4e7cee022263 251 Gene3D G3DSA:3.40.50.720 2 245 1.4E-89 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS19365 020ecccfd556cddeeacd4e7cee022263 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 9.7E-14 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS19365 020ecccfd556cddeeacd4e7cee022263 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.7E-14 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS19365 020ecccfd556cddeeacd4e7cee022263 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 9.7E-14 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS19365 020ecccfd556cddeeacd4e7cee022263 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 9.7E-49 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS19365 020ecccfd556cddeeacd4e7cee022263 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.7E-49 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS19365 020ecccfd556cddeeacd4e7cee022263 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 9.7E-49 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS19365 020ecccfd556cddeeacd4e7cee022263 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 9.7E-49 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS19365 020ecccfd556cddeeacd4e7cee022263 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 9.7E-49 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS19365 020ecccfd556cddeeacd4e7cee022263 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 9.7E-49 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS19365 020ecccfd556cddeeacd4e7cee022263 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 183 6.4E-4 T 09-03-2017 NA29_RS19365 020ecccfd556cddeeacd4e7cee022263 251 SUPERFAMILY SSF51735 3 245 1.17E-86 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS19365 020ecccfd556cddeeacd4e7cee022263 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS19365 020ecccfd556cddeeacd4e7cee022263 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 3.7E-69 T 09-03-2017 NA29_RS10525 5ee7df46203bc25bf3122d6ee0fbd9f0 472 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 454 3.3E-175 T 09-03-2017 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 NA29_RS10525 5ee7df46203bc25bf3122d6ee0fbd9f0 472 Pfam PF00982 Glycosyltransferase family 20 17 454 3.9E-131 T 09-03-2017 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 NA29_RS10525 5ee7df46203bc25bf3122d6ee0fbd9f0 472 SUPERFAMILY SSF53756 2 454 2.32E-143 T 09-03-2017 NA29_RS10525 5ee7df46203bc25bf3122d6ee0fbd9f0 472 Gene3D G3DSA:3.40.50.2000 1 239 3.3E-70 T 09-03-2017 NA29_RS10525 5ee7df46203bc25bf3122d6ee0fbd9f0 472 Gene3D G3DSA:3.40.50.2000 240 437 4.2E-75 T 09-03-2017 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 12 825 7.1E-292 T 09-03-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 SUPERFAMILY SSF56719 416 582 2.62E-86 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 SUPERFAMILY SSF56719 751 815 2.62E-86 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 Gene3D G3DSA:3.40.50.670 426 572 4.1E-98 T 09-03-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 Gene3D G3DSA:3.40.50.670 739 807 4.1E-98 T 09-03-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 SMART SM00387 38 198 4.9E-21 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 ProSitePatterns PS00177 DNA topoisomerase II signature. 444 452 - T 09-03-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 Pfam PF01751 Toprim domain 441 553 1.9E-17 T 09-03-2017 IPR006171 Toprim domain NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR00418 DNA topoisomerase II family signature 124 138 1.2E-66 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR00418 DNA topoisomerase II family signature 547 559 1.2E-66 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR00418 DNA topoisomerase II family signature 290 303 1.2E-66 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR00418 DNA topoisomerase II family signature 442 456 1.2E-66 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR00418 DNA topoisomerase II family signature 527 544 1.2E-66 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR00418 DNA topoisomerase II family signature 77 90 1.2E-66 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR00418 DNA topoisomerase II family signature 509 525 1.2E-66 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR00418 DNA topoisomerase II family signature 42 57 1.2E-66 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR00418 DNA topoisomerase II family signature 757 773 1.2E-66 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 SUPERFAMILY SSF55874 12 238 7.89E-65 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 9 825 99.391 T 09-03-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 39 197 4.1E-21 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 Pfam PF00204 DNA gyrase B 243 412 3.9E-57 T 09-03-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 Gene3D G3DSA:3.30.565.10 12 239 9.2E-92 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR01159 DNA gyrase subunit B signature 778 790 4.1E-74 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR01159 DNA gyrase subunit B signature 12 22 4.1E-74 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR01159 DNA gyrase subunit B signature 396 416 4.1E-74 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR01159 DNA gyrase subunit B signature 242 264 4.1E-74 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR01159 DNA gyrase subunit B signature 218 231 4.1E-74 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR01159 DNA gyrase subunit B signature 334 350 4.1E-74 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR01159 DNA gyrase subunit B signature 203 218 4.1E-74 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR01159 DNA gyrase subunit B signature 794 810 4.1E-74 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR01159 DNA gyrase subunit B signature 492 501 4.1E-74 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 PRINTS PR01159 DNA gyrase subunit B signature 382 396 4.1E-74 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 753 814 1.5E-28 T 09-03-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 SMART SM00433 42 818 1.6E-252 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 Gene3D G3DSA:3.30.230.10 242 414 1.6E-74 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NA29_RS00015 c3b6e9b01512380046d94e6fe22e5a8d 825 SUPERFAMILY SSF54211 243 414 2.09E-58 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS19435 296595ee7d0bb8854d3fe21d8b1af39e 302 Pfam PF00924 Mechanosensitive ion channel 62 247 8.7E-32 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 NA29_RS19435 296595ee7d0bb8854d3fe21d8b1af39e 302 Gene3D G3DSA:2.30.30.60 117 164 2.2E-13 T 09-03-2017 NA29_RS19435 296595ee7d0bb8854d3fe21d8b1af39e 302 SUPERFAMILY SSF82689 169 252 7.06E-14 T 09-03-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 NA29_RS19435 296595ee7d0bb8854d3fe21d8b1af39e 302 Pfam PF05552 Conserved TM helix 12 52 3.3E-7 T 09-03-2017 IPR008910 Conserved TM helix NA29_RS19435 296595ee7d0bb8854d3fe21d8b1af39e 302 SUPERFAMILY SSF82861 16 98 1.44E-14 T 09-03-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 NA29_RS19435 296595ee7d0bb8854d3fe21d8b1af39e 302 SUPERFAMILY SSF50182 102 164 1.14E-14 T 09-03-2017 IPR010920 LSM domain NA29_RS19435 296595ee7d0bb8854d3fe21d8b1af39e 302 Gene3D G3DSA:3.30.70.100 171 247 2.1E-10 T 09-03-2017 NA29_RS16960 699ab9629bd06966ca47f1d507996e14 305 Gene3D G3DSA:3.40.190.10 101 186 1.6E-24 T 09-03-2017 NA29_RS16960 699ab9629bd06966ca47f1d507996e14 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.4E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16960 699ab9629bd06966ca47f1d507996e14 305 Gene3D G3DSA:3.40.190.10 187 265 2.6E-9 T 09-03-2017 NA29_RS16960 699ab9629bd06966ca47f1d507996e14 305 SUPERFAMILY SSF46785 4 121 1.25E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16960 699ab9629bd06966ca47f1d507996e14 305 SUPERFAMILY SSF53850 99 299 6.33E-40 T 09-03-2017 NA29_RS16960 699ab9629bd06966ca47f1d507996e14 305 Pfam PF03466 LysR substrate binding domain 99 296 4.8E-39 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS16960 699ab9629bd06966ca47f1d507996e14 305 Gene3D G3DSA:1.10.10.10 3 80 2.7E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00685 098cadedec3db7c46f11d51184244e27 461 SUPERFAMILY SSF102114 9 446 4.97E-131 T 09-03-2017 NA29_RS00685 098cadedec3db7c46f11d51184244e27 461 Gene3D G3DSA:3.80.30.20 55 253 3.5E-26 T 09-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe NA29_RS00685 098cadedec3db7c46f11d51184244e27 461 SMART SM00729 55 280 1.6E-40 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NA29_RS00685 098cadedec3db7c46f11d51184244e27 461 PIRSF PIRSF000167 6 459 9.0E-163 T 09-03-2017 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 NA29_RS00685 098cadedec3db7c46f11d51184244e27 461 Pfam PF06969 HemN C-terminal domain 368 436 6.1E-11 T 09-03-2017 IPR010723 HemN, C-terminal NA29_RS00685 098cadedec3db7c46f11d51184244e27 461 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 8 456 2.5E-176 T 09-03-2017 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22 NA29_RS00685 098cadedec3db7c46f11d51184244e27 461 Pfam PF04055 Radical SAM superfamily 61 233 2.9E-13 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 NA29_RS07975 c2c2f838f882fe3bbe41903b684ecb12 415 SUPERFAMILY SSF160996 193 347 6.67E-40 T 09-03-2017 NA29_RS07975 c2c2f838f882fe3bbe41903b684ecb12 415 SUPERFAMILY SSF51905 1 192 6.79E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07975 c2c2f838f882fe3bbe41903b684ecb12 415 SUPERFAMILY SSF51905 344 401 6.79E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07975 c2c2f838f882fe3bbe41903b684ecb12 415 Gene3D G3DSA:2.40.30.10 192 276 5.2E-27 T 09-03-2017 NA29_RS07975 c2c2f838f882fe3bbe41903b684ecb12 415 Pfam PF03486 HI0933-like protein 4 399 4.6E-135 T 09-03-2017 NA29_RS07975 c2c2f838f882fe3bbe41903b684ecb12 415 Gene3D G3DSA:1.10.8.260 277 328 7.6E-8 T 09-03-2017 IPR023166 HI0933 insert-like domain NA29_RS07975 c2c2f838f882fe3bbe41903b684ecb12 415 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 1.1E-6 T 09-03-2017 NA29_RS07975 c2c2f838f882fe3bbe41903b684ecb12 415 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.1E-6 T 09-03-2017 NA29_RS07975 c2c2f838f882fe3bbe41903b684ecb12 415 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 399 1.3E-115 T 09-03-2017 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like NA29_RS07975 c2c2f838f882fe3bbe41903b684ecb12 415 Gene3D G3DSA:3.50.50.60 2 190 4.9E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07975 c2c2f838f882fe3bbe41903b684ecb12 415 Gene3D G3DSA:3.50.50.60 346 403 4.9E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS02015 ee804534c8c6fc87270f1f3f4e3ae277 263 Gene3D G3DSA:1.10.12.10 204 260 1.4E-14 T 09-03-2017 IPR014748 Crontonase, C-terminal NA29_RS02015 ee804534c8c6fc87270f1f3f4e3ae277 263 Gene3D G3DSA:3.90.226.10 4 202 1.8E-58 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS02015 ee804534c8c6fc87270f1f3f4e3ae277 263 SUPERFAMILY SSF52096 2 261 2.49E-75 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS02015 ee804534c8c6fc87270f1f3f4e3ae277 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 261 9.6E-56 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS18330 d3e75e653a3579bd1f0babf966b74306 225 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 7 214 1.4E-43 T 09-03-2017 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 NA29_RS18330 d3e75e653a3579bd1f0babf966b74306 225 Gene3D G3DSA:3.40.50.1360 2 212 3.3E-40 T 09-03-2017 NA29_RS18330 d3e75e653a3579bd1f0babf966b74306 225 SUPERFAMILY SSF100950 1 216 2.62E-42 T 09-03-2017 NA29_RS18330 d3e75e653a3579bd1f0babf966b74306 225 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 204 5.3E-41 T 09-03-2017 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 NA29_RS24755 1dba5f5fd67d8a5b1e23a101aa41bf6a 306 SMART SM00387 191 285 1.4E-9 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS24755 1dba5f5fd67d8a5b1e23a101aa41bf6a 306 SUPERFAMILY SSF55874 187 283 1.06E-16 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS24755 1dba5f5fd67d8a5b1e23a101aa41bf6a 306 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 195 282 1.2E-5 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS24755 1dba5f5fd67d8a5b1e23a101aa41bf6a 306 Gene3D G3DSA:3.30.565.10 193 284 2.8E-8 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS24755 1dba5f5fd67d8a5b1e23a101aa41bf6a 306 Pfam PF07730 Histidine kinase 83 150 9.4E-11 T 09-03-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NA29_RS25290 d6203a29aba527dc55e25d65cb6b0431 2011 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 549 656 8.3E-34 T 09-03-2017 IPR021868 Alpha-2-macroglobulin MG1 domain NA29_RS25290 d6203a29aba527dc55e25d65cb6b0431 2011 SMART SM01359 1056 1240 2.7E-44 T 09-03-2017 IPR011625 Alpha-2-macroglobulin, N-terminal 2 NA29_RS25290 d6203a29aba527dc55e25d65cb6b0431 2011 SMART SM01360 1298 1394 1.8E-18 T 09-03-2017 IPR001599 Alpha-2-macroglobulin GO:0004866 NA29_RS25290 d6203a29aba527dc55e25d65cb6b0431 2011 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 1057 1240 1.7E-17 T 09-03-2017 IPR011625 Alpha-2-macroglobulin, N-terminal 2 NA29_RS25290 d6203a29aba527dc55e25d65cb6b0431 2011 Pfam PF01835 MG2 domain 665 769 5.3E-23 T 09-03-2017 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 NA29_RS25290 d6203a29aba527dc55e25d65cb6b0431 2011 Pfam PF00207 Alpha-2-macroglobulin family 1300 1393 8.5E-9 T 09-03-2017 IPR001599 Alpha-2-macroglobulin GO:0004866 NA29_RS02735 fbbd55179237920da57599d1531a6fd0 151 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 09-03-2017 IPR002178 PTS EIIA type-2 domain NA29_RS02735 fbbd55179237920da57599d1531a6fd0 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 8 148 7.4E-34 T 09-03-2017 IPR002178 PTS EIIA type-2 domain NA29_RS02735 fbbd55179237920da57599d1531a6fd0 151 SUPERFAMILY SSF55804 1 149 2.75E-45 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 NA29_RS02735 fbbd55179237920da57599d1531a6fd0 151 Gene3D G3DSA:3.40.930.10 1 149 1.5E-43 T 09-03-2017 IPR002178 PTS EIIA type-2 domain NA29_RS02735 fbbd55179237920da57599d1531a6fd0 151 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 4 147 9.3E-43 T 09-03-2017 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 NA29_RS10545 bd74ab75f32cee17255aa0c87d8d8c80 547 Pfam PF00672 HAMP domain 198 264 3.8E-13 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS10545 bd74ab75f32cee17255aa0c87d8d8c80 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 2.2E-64 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS10545 bd74ab75f32cee17255aa0c87d8d8c80 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.2E-64 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS10545 bd74ab75f32cee17255aa0c87d8d8c80 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 291 320 2.2E-64 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS10545 bd74ab75f32cee17255aa0c87d8d8c80 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 395 2.2E-64 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS10545 bd74ab75f32cee17255aa0c87d8d8c80 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 190 210 2.2E-64 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS10545 bd74ab75f32cee17255aa0c87d8d8c80 547 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 474 2.2E-64 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS10545 bd74ab75f32cee17255aa0c87d8d8c80 547 SMART SM00304 217 269 1.3E-13 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS10545 bd74ab75f32cee17255aa0c87d8d8c80 547 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 516 1.1E-62 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS10545 bd74ab75f32cee17255aa0c87d8d8c80 547 Pfam PF02203 Tar ligand binding domain homologue 1 178 2.7E-35 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 NA29_RS10545 bd74ab75f32cee17255aa0c87d8d8c80 547 SUPERFAMILY SSF47170 27 164 1.57E-10 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 NA29_RS10545 bd74ab75f32cee17255aa0c87d8d8c80 547 Gene3D G3DSA:1.10.287.950 285 489 1.1E-60 T 09-03-2017 NA29_RS10545 bd74ab75f32cee17255aa0c87d8d8c80 547 SUPERFAMILY SSF58104 237 522 1.16E-73 T 09-03-2017 NA29_RS10545 bd74ab75f32cee17255aa0c87d8d8c80 547 SMART SM00283 270 517 4.6E-94 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS03260 d00a55a73f1aecaa4c2ae83c136277de 349 SUPERFAMILY SSF51430 1 320 2.1E-102 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain NA29_RS03260 d00a55a73f1aecaa4c2ae83c136277de 349 Pfam PF00248 Aldo/keto reductase family 15 320 8.7E-83 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain NA29_RS03260 d00a55a73f1aecaa4c2ae83c136277de 349 Gene3D G3DSA:3.20.20.100 1 321 5.3E-106 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain NA29_RS13670 7884927ec8b7c21c194048bf64fbb738 217 Pfam PF00717 Peptidase S24-like 130 196 2.0E-15 T 09-03-2017 IPR019759 Peptidase S24/S26A/S26B NA29_RS13670 7884927ec8b7c21c194048bf64fbb738 217 Gene3D G3DSA:2.10.109.10 92 214 9.3E-41 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain NA29_RS13670 7884927ec8b7c21c194048bf64fbb738 217 SUPERFAMILY SSF46785 3 69 2.97E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13670 7884927ec8b7c21c194048bf64fbb738 217 Gene3D G3DSA:1.10.10.10 1 68 7.1E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13670 7884927ec8b7c21c194048bf64fbb738 217 Hamap MF_00015 LexA repressor [lexA]. 3 215 30.806 T 09-03-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 NA29_RS13670 7884927ec8b7c21c194048bf64fbb738 217 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 127 137 8.8E-10 T 09-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 NA29_RS13670 7884927ec8b7c21c194048bf64fbb738 217 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 138 149 8.8E-10 T 09-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 NA29_RS13670 7884927ec8b7c21c194048bf64fbb738 217 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 166 178 8.8E-10 T 09-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 NA29_RS13670 7884927ec8b7c21c194048bf64fbb738 217 Pfam PF01726 LexA DNA binding domain 1 65 3.1E-25 T 09-03-2017 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 NA29_RS13670 7884927ec8b7c21c194048bf64fbb738 217 TIGRFAM TIGR00498 lexA: repressor LexA 1 215 9.6E-67 T 09-03-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 NA29_RS13670 7884927ec8b7c21c194048bf64fbb738 217 SUPERFAMILY SSF51306 91 214 5.41E-34 T 09-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C NA29_RS08745 31f89281ec6000dfc708e276961dd936 398 Pfam PF02653 Branched-chain amino acid transport system / permease component 68 367 9.7E-34 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS08745 31f89281ec6000dfc708e276961dd936 398 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 60 378 2.9E-133 T 09-03-2017 IPR017778 ABC transporter, urea, permease protein, UrtC NA29_RS11890 a2ef1e9714ff1ce2a229a81a7a87295a 300 Pfam PF12833 Helix-turn-helix domain 217 292 1.1E-16 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS11890 a2ef1e9714ff1ce2a229a81a7a87295a 300 SUPERFAMILY SSF46689 194 243 2.24E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS11890 a2ef1e9714ff1ce2a229a81a7a87295a 300 Gene3D G3DSA:2.60.120.10 38 116 1.6E-6 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS11890 a2ef1e9714ff1ce2a229a81a7a87295a 300 SUPERFAMILY SSF46689 246 295 7.53E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS11890 a2ef1e9714ff1ce2a229a81a7a87295a 300 Gene3D G3DSA:1.10.10.60 247 294 7.5E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS11890 a2ef1e9714ff1ce2a229a81a7a87295a 300 Gene3D G3DSA:1.10.10.60 187 246 4.8E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS11890 a2ef1e9714ff1ce2a229a81a7a87295a 300 SMART SM00342 210 293 1.8E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS00445 4a6cd4ec9fab35c590028e88364e51b8 411 SUPERFAMILY SSF103473 16 401 1.44E-55 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS00445 4a6cd4ec9fab35c590028e88364e51b8 411 Gene3D G3DSA:1.20.1250.20 229 407 5.1E-19 T 09-03-2017 NA29_RS00445 4a6cd4ec9fab35c590028e88364e51b8 411 Gene3D G3DSA:1.20.1250.20 25 207 7.4E-21 T 09-03-2017 NA29_RS00445 4a6cd4ec9fab35c590028e88364e51b8 411 Pfam PF07690 Major Facilitator Superfamily 29 366 9.9E-39 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS22190 fce9124432b438426b0d6bd43fba15d0 298 Gene3D G3DSA:3.30.1150.10 160 283 3.4E-13 T 09-03-2017 NA29_RS22190 fce9124432b438426b0d6bd43fba15d0 298 SUPERFAMILY SSF74653 161 283 3.53E-14 T 09-03-2017 NA29_RS02505 e959a0d62ea6985adea530cc7266e77d 422 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 79 381 2.8E-60 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS02505 e959a0d62ea6985adea530cc7266e77d 422 SUPERFAMILY SSF53686 51 389 8.12E-72 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS02505 e959a0d62ea6985adea530cc7266e77d 422 Gene3D G3DSA:3.40.50.1100 146 395 1.3E-51 T 09-03-2017 NA29_RS16900 ba1e92f6a6b048ecb87181072df366f9 319 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 283 36.761 T 09-03-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 NA29_RS16900 ba1e92f6a6b048ecb87181072df366f9 319 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 281 6.7E-96 T 09-03-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 NA29_RS16900 ba1e92f6a6b048ecb87181072df366f9 319 Pfam PF02401 LytB protein 3 279 9.5E-89 T 09-03-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 NA29_RS07575 efb233cae85e787fe78b7cbf9fb2899e 259 SMART SM00345 45 103 2.4E-4 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS07575 efb233cae85e787fe78b7cbf9fb2899e 259 SMART SM00895 113 237 1.2E-23 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS07575 efb233cae85e787fe78b7cbf9fb2899e 259 SUPERFAMILY SSF48008 109 241 2.62E-31 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS07575 efb233cae85e787fe78b7cbf9fb2899e 259 Pfam PF07729 FCD domain 113 236 3.1E-30 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS07575 efb233cae85e787fe78b7cbf9fb2899e 259 Gene3D G3DSA:1.10.10.10 33 104 2.2E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07575 efb233cae85e787fe78b7cbf9fb2899e 259 SUPERFAMILY SSF46785 35 119 2.66E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07575 efb233cae85e787fe78b7cbf9fb2899e 259 Gene3D G3DSA:1.20.120.530 107 243 1.5E-32 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS07575 efb233cae85e787fe78b7cbf9fb2899e 259 Pfam PF00392 Bacterial regulatory proteins, gntR family 41 101 2.1E-10 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS24350 c25e615126dadf083a94725382bc0bd6 310 Gene3D G3DSA:3.40.190.10 82 193 5.7E-19 T 09-03-2017 NA29_RS24350 c25e615126dadf083a94725382bc0bd6 310 SUPERFAMILY SSF53850 88 282 3.08E-31 T 09-03-2017 NA29_RS24350 c25e615126dadf083a94725382bc0bd6 310 SUPERFAMILY SSF46785 1 110 2.24E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS24350 c25e615126dadf083a94725382bc0bd6 310 Gene3D G3DSA:3.40.190.10 194 268 7.7E-9 T 09-03-2017 NA29_RS24350 c25e615126dadf083a94725382bc0bd6 310 Gene3D G3DSA:1.10.10.10 1 81 1.7E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS24350 c25e615126dadf083a94725382bc0bd6 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.6E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS24350 c25e615126dadf083a94725382bc0bd6 310 Pfam PF03466 LysR substrate binding domain 87 281 1.2E-34 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS17135 678429df4abe7cffdcea8f54be113b4d 308 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 4 306 9.5E-117 T 09-03-2017 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 NA29_RS17135 678429df4abe7cffdcea8f54be113b4d 308 SUPERFAMILY SSF55347 117 289 8.11E-37 T 09-03-2017 NA29_RS17135 678429df4abe7cffdcea8f54be113b4d 308 Gene3D G3DSA:3.40.50.720 19 125 2.4E-20 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17135 678429df4abe7cffdcea8f54be113b4d 308 SUPERFAMILY SSF51735 6 138 6.72E-30 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17135 678429df4abe7cffdcea8f54be113b4d 308 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 112 128 - T 09-03-2017 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 NA29_RS17135 678429df4abe7cffdcea8f54be113b4d 308 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 308 49.883 T 09-03-2017 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 NA29_RS17135 678429df4abe7cffdcea8f54be113b4d 308 SMART SM00859 5 106 6.3E-10 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 NA29_RS17135 678429df4abe7cffdcea8f54be113b4d 308 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 44 102 1.2E-11 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 NA29_RS17135 678429df4abe7cffdcea8f54be113b4d 308 Gene3D G3DSA:3.30.360.10 126 289 7.5E-40 T 09-03-2017 NA29_RS13695 0808eb6ef287b4e0c5034d37a44f43ff 507 Gene3D G3DSA:1.20.1600.10 156 328 1.4E-87 T 09-03-2017 NA29_RS13695 0808eb6ef287b4e0c5034d37a44f43ff 507 Gene3D G3DSA:1.20.1600.10 366 480 1.4E-87 T 09-03-2017 NA29_RS13695 0808eb6ef287b4e0c5034d37a44f43ff 507 Gene3D G3DSA:1.20.1600.10 65 103 1.4E-87 T 09-03-2017 NA29_RS13695 0808eb6ef287b4e0c5034d37a44f43ff 507 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 26 479 1.5E-120 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NA29_RS13695 0808eb6ef287b4e0c5034d37a44f43ff 507 SUPERFAMILY SSF56954 12 481 2.49E-99 T 09-03-2017 NA29_RS13695 0808eb6ef287b4e0c5034d37a44f43ff 507 Pfam PF02321 Outer membrane efflux protein 80 268 1.9E-21 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS13695 0808eb6ef287b4e0c5034d37a44f43ff 507 Pfam PF02321 Outer membrane efflux protein 297 477 4.1E-27 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS13695 0808eb6ef287b4e0c5034d37a44f43ff 507 Gene3D G3DSA:2.20.200.10 113 155 6.4E-22 T 09-03-2017 NA29_RS13695 0808eb6ef287b4e0c5034d37a44f43ff 507 Gene3D G3DSA:2.20.200.10 329 364 6.4E-22 T 09-03-2017 NA29_RS08500 8d44c6725cd99a447906f3aae9581e51 102 Gene3D G3DSA:3.10.20.30 18 88 1.1E-6 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS08500 8d44c6725cd99a447906f3aae9581e51 102 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 16 95 6.1E-25 T 09-03-2017 NA29_RS08500 8d44c6725cd99a447906f3aae9581e51 102 SUPERFAMILY SSF54292 18 97 2.02E-17 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS13640 552b7f81700e501b06c4b824f058ed8a 503 Pfam PF01494 FAD binding domain 5 356 8.2E-70 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 NA29_RS13640 552b7f81700e501b06c4b824f058ed8a 503 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 169 184 3.9E-43 T 09-03-2017 NA29_RS13640 552b7f81700e501b06c4b824f058ed8a 503 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 306 3.9E-43 T 09-03-2017 NA29_RS13640 552b7f81700e501b06c4b824f058ed8a 503 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 342 358 3.9E-43 T 09-03-2017 NA29_RS13640 552b7f81700e501b06c4b824f058ed8a 503 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.9E-43 T 09-03-2017 NA29_RS13640 552b7f81700e501b06c4b824f058ed8a 503 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 324 342 3.9E-43 T 09-03-2017 NA29_RS13640 552b7f81700e501b06c4b824f058ed8a 503 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 306 322 3.9E-43 T 09-03-2017 NA29_RS13640 552b7f81700e501b06c4b824f058ed8a 503 Gene3D G3DSA:3.30.9.10 181 284 3.0E-8 T 09-03-2017 NA29_RS13640 552b7f81700e501b06c4b824f058ed8a 503 Gene3D G3DSA:3.30.9.10 339 379 3.0E-8 T 09-03-2017 NA29_RS13640 552b7f81700e501b06c4b824f058ed8a 503 SUPERFAMILY SSF51905 5 190 2.03E-53 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS13640 552b7f81700e501b06c4b824f058ed8a 503 SUPERFAMILY SSF51905 278 380 2.03E-53 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS13640 552b7f81700e501b06c4b824f058ed8a 503 Gene3D G3DSA:3.50.50.60 289 329 1.5E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS13640 552b7f81700e501b06c4b824f058ed8a 503 Gene3D G3DSA:3.50.50.60 3 180 1.5E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 Gene3D G3DSA:1.10.10.10 172 235 8.4E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 SUPERFAMILY SSF88659 148 237 5.42E-20 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 14 233 1.5E-84 T 09-03-2017 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 SUPERFAMILY SSF88659 87 154 2.44E-13 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 203 229 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 2 236 63.257 T 09-03-2017 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 40 53 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 Pfam PF04545 Sigma-70, region 4 182 231 1.4E-15 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 231 6.1E-31 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 SUPERFAMILY SSF88946 4 85 7.06E-23 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 PRINTS PR00046 Major sigma-70 factor signature 64 72 2.1E-11 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 PRINTS PR00046 Major sigma-70 factor signature 218 229 2.1E-11 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 PRINTS PR00046 Major sigma-70 factor signature 40 53 2.1E-11 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 PRINTS PR00046 Major sigma-70 factor signature 186 198 2.1E-11 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 PRINTS PR00046 Major sigma-70 factor signature 203 218 2.1E-11 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 Pfam PF04542 Sigma-70 region 2 15 85 1.6E-16 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 Gene3D G3DSA:1.10.10.10 87 132 5.0E-8 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 Gene3D G3DSA:1.10.601.10 17 77 2.6E-13 T 09-03-2017 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 Pfam PF04539 Sigma-70 region 3 93 151 5.3E-9 T 09-03-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS24955 eeb61d33872997ba0674a84ca0c6f016 242 PIRSF PIRSF000770 1 240 7.9E-40 T 09-03-2017 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 NA29_RS04445 319ffc9522e8f2a14f6526492b574e1c 197 SUPERFAMILY SSF48498 77 192 2.07E-23 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS04445 319ffc9522e8f2a14f6526492b574e1c 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 1.3E-9 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS04445 319ffc9522e8f2a14f6526492b574e1c 197 Gene3D G3DSA:1.10.10.60 2 57 1.2E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS04445 319ffc9522e8f2a14f6526492b574e1c 197 Gene3D G3DSA:1.10.357.10 58 194 1.9E-56 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS04445 319ffc9522e8f2a14f6526492b574e1c 197 SUPERFAMILY SSF46689 2 70 1.13E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS04445 319ffc9522e8f2a14f6526492b574e1c 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 7.0E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS04445 319ffc9522e8f2a14f6526492b574e1c 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 7.0E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS18340 8b8b0c65601cf72fcba2fccd63c375ff 608 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 156 166 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS18340 8b8b0c65601cf72fcba2fccd63c375ff 608 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS18340 8b8b0c65601cf72fcba2fccd63c375ff 608 Pfam PF00920 Dehydratase family 68 595 3.7E-163 T 09-03-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS18340 8b8b0c65601cf72fcba2fccd63c375ff 608 SUPERFAMILY SSF52016 418 599 2.59E-58 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS18340 8b8b0c65601cf72fcba2fccd63c375ff 608 SUPERFAMILY SSF143975 3 417 2.09E-139 T 09-03-2017 NA29_RS18340 8b8b0c65601cf72fcba2fccd63c375ff 608 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 4 598 8.9E-283 T 09-03-2017 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 NA29_RS04695 5c420458b4f3492d1d8bcfe62df2339d 101 Pfam PF06287 Protein of unknown function (DUF1039) 6 61 8.2E-13 T 09-03-2017 IPR010437 Type III secretion system SsaH NA29_RS16750 6ad21126ad720596867e3fb1797a5511 191 SUPERFAMILY SSF88659 113 189 9.53E-13 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS16750 6ad21126ad720596867e3fb1797a5511 191 SUPERFAMILY SSF88946 2 46 2.39E-5 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS16750 6ad21126ad720596867e3fb1797a5511 191 Gene3D G3DSA:1.10.1740.10 3 100 3.3E-8 T 09-03-2017 NA29_RS16750 6ad21126ad720596867e3fb1797a5511 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 77 186 2.9E-17 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS16750 6ad21126ad720596867e3fb1797a5511 191 Gene3D G3DSA:1.10.10.10 126 189 2.4E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16750 6ad21126ad720596867e3fb1797a5511 191 Pfam PF08281 Sigma-70, region 4 132 179 6.1E-10 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS13990 21cc03f59f91a580c289c7a968b1747c 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 333 8.7E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS13990 21cc03f59f91a580c289c7a968b1747c 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 352 8.7E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS13990 21cc03f59f91a580c289c7a968b1747c 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 370 8.7E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS13990 21cc03f59f91a580c289c7a968b1747c 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 319 8.7E-11 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS13990 21cc03f59f91a580c289c7a968b1747c 372 Gene3D G3DSA:1.10.287.130 147 206 8.0E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS13990 21cc03f59f91a580c289c7a968b1747c 372 SMART SM00388 148 213 1.7E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS13990 21cc03f59f91a580c289c7a968b1747c 372 Gene3D G3DSA:3.30.450.20 28 111 3.2E-9 T 09-03-2017 NA29_RS13990 21cc03f59f91a580c289c7a968b1747c 372 SMART SM00387 253 372 2.0E-23 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS13990 21cc03f59f91a580c289c7a968b1747c 372 Pfam PF00512 His Kinase A (phospho-acceptor) domain 149 209 2.5E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS13990 21cc03f59f91a580c289c7a968b1747c 372 SUPERFAMILY SSF55874 217 370 2.88E-32 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS13990 21cc03f59f91a580c289c7a968b1747c 372 SUPERFAMILY SSF47384 137 209 2.55E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS13990 21cc03f59f91a580c289c7a968b1747c 372 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 253 371 8.3E-15 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS13990 21cc03f59f91a580c289c7a968b1747c 372 Gene3D G3DSA:3.30.565.10 215 371 1.2E-33 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS19955 082bebb2c24f18f640e48f0ea302db19 343 SUPERFAMILY SSF51679 8 335 5.54E-75 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS19955 082bebb2c24f18f640e48f0ea302db19 343 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 10 336 5.1E-116 T 09-03-2017 IPR019949 Luciferase family oxidoreductase, group 1 NA29_RS19955 082bebb2c24f18f640e48f0ea302db19 343 Pfam PF00296 Luciferase-like monooxygenase 26 307 1.3E-33 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS19955 082bebb2c24f18f640e48f0ea302db19 343 Gene3D G3DSA:3.20.20.30 9 335 1.1E-80 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS10490 ceb890d5be16f0dc3f70baaefb3143c7 375 PIRSF PIRSF006487 2 360 2.9E-14 T 09-03-2017 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 NA29_RS10490 ceb890d5be16f0dc3f70baaefb3143c7 375 Gene3D G3DSA:3.30.70.1400 45 131 8.7E-27 T 09-03-2017 NA29_RS10490 ceb890d5be16f0dc3f70baaefb3143c7 375 SUPERFAMILY SSF103025 26 278 7.69E-53 T 09-03-2017 NA29_RS10490 ceb890d5be16f0dc3f70baaefb3143c7 375 Pfam PF01571 Aminomethyltransferase folate-binding domain 35 212 1.4E-12 T 09-03-2017 IPR006222 Glycine cleavage T-protein-like, N-terminal NA29_RS10490 ceb890d5be16f0dc3f70baaefb3143c7 375 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 226 287 1.1E-24 T 09-03-2017 IPR017703 YgfZ/GcvT conserved site NA29_RS18680 0679942eae575b447d1a718432c648e4 411 Pfam PF00155 Aminotransferase class I and II 64 390 9.3E-34 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS18680 0679942eae575b447d1a718432c648e4 411 SUPERFAMILY SSF53383 12 396 1.81E-110 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS18680 0679942eae575b447d1a718432c648e4 411 Gene3D G3DSA:3.90.1150.10 277 395 1.0E-12 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS18680 0679942eae575b447d1a718432c648e4 411 Gene3D G3DSA:3.40.640.10 64 276 3.1E-75 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS06200 2003213eed33a65b14eddacea2422327 98 Gene3D G3DSA:3.30.70.1060 1 89 2.2E-21 T 09-03-2017 NA29_RS06200 2003213eed33a65b14eddacea2422327 98 Pfam PF03795 YCII-related domain 1 86 1.4E-7 T 09-03-2017 IPR005545 YCII-related NA29_RS06200 2003213eed33a65b14eddacea2422327 98 SUPERFAMILY SSF54909 1 88 1.69E-19 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS18940 877f581155c1630b650b3588b70b4e49 343 SMART SM00382 39 247 8.9E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS18940 877f581155c1630b650b3588b70b4e49 343 SUPERFAMILY SSF52540 39 322 1.41E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18940 877f581155c1630b650b3588b70b4e49 343 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS18940 877f581155c1630b650b3588b70b4e49 343 Pfam PF00005 ABC transporter 31 189 2.6E-25 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS18940 877f581155c1630b650b3588b70b4e49 343 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 325 6.0E-29 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS18940 877f581155c1630b650b3588b70b4e49 343 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 305 1.5E-22 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS18940 877f581155c1630b650b3588b70b4e49 343 Gene3D G3DSA:3.40.50.300 6 268 5.6E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07315 1d8c141e26df12a9e38ffa644c994096 235 PIRSF PIRSF003107 3 225 8.9E-61 T 09-03-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 NA29_RS07315 1d8c141e26df12a9e38ffa644c994096 235 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 8 220 6.0E-71 T 09-03-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 NA29_RS07315 1d8c141e26df12a9e38ffa644c994096 235 Pfam PF01895 PhoU domain 22 109 4.0E-18 T 09-03-2017 IPR026022 PhoU domain NA29_RS07315 1d8c141e26df12a9e38ffa644c994096 235 Pfam PF01895 PhoU domain 130 210 6.3E-16 T 09-03-2017 IPR026022 PhoU domain NA29_RS07315 1d8c141e26df12a9e38ffa644c994096 235 Gene3D G3DSA:1.20.58.220 126 233 1.1E-31 T 09-03-2017 NA29_RS07315 1d8c141e26df12a9e38ffa644c994096 235 Gene3D G3DSA:1.20.58.220 5 114 4.5E-32 T 09-03-2017 NA29_RS07315 1d8c141e26df12a9e38ffa644c994096 235 SUPERFAMILY SSF109755 8 230 3.77E-68 T 09-03-2017 NA29_RS09495 1293b4eee4c2184f8968e6e7aabf4fed 381 SUPERFAMILY SSF54373 239 313 4.19E-8 T 09-03-2017 NA29_RS09495 1293b4eee4c2184f8968e6e7aabf4fed 381 Gene3D G3DSA:3.30.9.10 88 141 2.6E-13 T 09-03-2017 NA29_RS09495 1293b4eee4c2184f8968e6e7aabf4fed 381 Gene3D G3DSA:3.30.9.10 224 310 2.6E-13 T 09-03-2017 NA29_RS09495 1293b4eee4c2184f8968e6e7aabf4fed 381 Gene3D G3DSA:3.50.50.60 3 83 2.0E-55 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS09495 1293b4eee4c2184f8968e6e7aabf4fed 381 Gene3D G3DSA:3.50.50.60 142 223 2.0E-55 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS09495 1293b4eee4c2184f8968e6e7aabf4fed 381 Gene3D G3DSA:3.50.50.60 314 372 2.0E-55 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS09495 1293b4eee4c2184f8968e6e7aabf4fed 381 Pfam PF01266 FAD dependent oxidoreductase 8 353 9.3E-61 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS09495 1293b4eee4c2184f8968e6e7aabf4fed 381 SUPERFAMILY SSF51905 6 224 2.59E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS09495 1293b4eee4c2184f8968e6e7aabf4fed 381 SUPERFAMILY SSF51905 314 372 2.59E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS13480 73a951070dc684b93a1a869736977a04 436 PIRSF PIRSF000098 1 435 9.4E-163 T 09-03-2017 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 NA29_RS13480 73a951070dc684b93a1a869736977a04 436 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 1.4E-19 T 09-03-2017 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 NA29_RS13480 73a951070dc684b93a1a869736977a04 436 SUPERFAMILY SSF55347 137 302 1.11E-51 T 09-03-2017 NA29_RS13480 73a951070dc684b93a1a869736977a04 436 Gene3D G3DSA:3.30.360.10 149 299 1.2E-56 T 09-03-2017 NA29_RS13480 73a951070dc684b93a1a869736977a04 436 Pfam PF00742 Homoserine dehydrogenase 137 315 2.8E-64 T 09-03-2017 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 NA29_RS13480 73a951070dc684b93a1a869736977a04 436 Gene3D G3DSA:3.40.50.720 1 148 1.6E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13480 73a951070dc684b93a1a869736977a04 436 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 09-03-2017 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 NA29_RS13480 73a951070dc684b93a1a869736977a04 436 Gene3D G3DSA:3.30.70.260 353 423 1.0E-8 T 09-03-2017 NA29_RS13480 73a951070dc684b93a1a869736977a04 436 Pfam PF01842 ACT domain 354 419 1.4E-11 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 NA29_RS13480 73a951070dc684b93a1a869736977a04 436 SUPERFAMILY SSF55021 353 423 1.26E-10 T 09-03-2017 NA29_RS13480 73a951070dc684b93a1a869736977a04 436 SUPERFAMILY SSF51735 1 158 4.18E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS06740 2e937840bb4f490c54a3be23854b4ce4 307 Gene3D G3DSA:3.40.190.10 181 266 2.5E-17 T 09-03-2017 NA29_RS06740 2e937840bb4f490c54a3be23854b4ce4 307 Gene3D G3DSA:3.40.190.10 93 180 6.7E-16 T 09-03-2017 NA29_RS06740 2e937840bb4f490c54a3be23854b4ce4 307 Pfam PF03466 LysR substrate binding domain 92 295 3.3E-42 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS06740 2e937840bb4f490c54a3be23854b4ce4 307 SUPERFAMILY SSF46785 5 116 8.48E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06740 2e937840bb4f490c54a3be23854b4ce4 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.1E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06740 2e937840bb4f490c54a3be23854b4ce4 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.1E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06740 2e937840bb4f490c54a3be23854b4ce4 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.1E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06740 2e937840bb4f490c54a3be23854b4ce4 307 Gene3D G3DSA:1.10.10.10 6 92 5.0E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06740 2e937840bb4f490c54a3be23854b4ce4 307 SUPERFAMILY SSF53850 93 295 7.6E-38 T 09-03-2017 NA29_RS06740 2e937840bb4f490c54a3be23854b4ce4 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 6.7E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19900 807378201b8af0c48379778c0a729b14 300 PIRSF PIRSF006250 22 298 1.1E-89 T 09-03-2017 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 NA29_RS19900 807378201b8af0c48379778c0a729b14 300 Gene3D G3DSA:3.90.1170.20 25 150 1.2E-48 T 09-03-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 NA29_RS19900 807378201b8af0c48379778c0a729b14 300 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 32 295 2.4E-85 T 09-03-2017 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 NA29_RS19900 807378201b8af0c48379778c0a729b14 300 SUPERFAMILY SSF54675 24 129 5.89E-32 T 09-03-2017 NA29_RS19900 807378201b8af0c48379778c0a729b14 300 Gene3D G3DSA:3.20.20.70 151 284 6.5E-53 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS19900 807378201b8af0c48379778c0a729b14 300 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 294 5.0E-51 T 09-03-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 NA29_RS19900 807378201b8af0c48379778c0a729b14 300 SUPERFAMILY SSF51690 130 295 5.1E-54 T 09-03-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 NA29_RS19900 807378201b8af0c48379778c0a729b14 300 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 40 128 2.4E-24 T 09-03-2017 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 NA29_RS17910 fd9c61e0f25368eb4008fa22e49651ca 223 SUPERFAMILY SSF46785 7 73 7.32E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17910 fd9c61e0f25368eb4008fa22e49651ca 223 SUPERFAMILY SSF48008 75 210 3.66E-29 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS17910 fd9c61e0f25368eb4008fa22e49651ca 223 Gene3D G3DSA:1.10.10.10 5 70 1.3E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17910 fd9c61e0f25368eb4008fa22e49651ca 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.5E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS17910 fd9c61e0f25368eb4008fa22e49651ca 223 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.5E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS17910 fd9c61e0f25368eb4008fa22e49651ca 223 SMART SM00345 11 69 3.9E-20 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS17910 fd9c61e0f25368eb4008fa22e49651ca 223 Pfam PF07729 FCD domain 79 201 5.6E-31 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS17910 fd9c61e0f25368eb4008fa22e49651ca 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 69 4.0E-19 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS17910 fd9c61e0f25368eb4008fa22e49651ca 223 SMART SM00895 79 203 3.0E-25 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS17910 fd9c61e0f25368eb4008fa22e49651ca 223 Gene3D G3DSA:1.20.120.530 72 213 1.1E-33 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS05320 8022dac5dfb09e39ed2ef06b012ea923 986 Gene3D G3DSA:3.30.365.10 258 366 8.2E-12 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS05320 8022dac5dfb09e39ed2ef06b012ea923 986 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 807 925 1.0E-14 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS05320 8022dac5dfb09e39ed2ef06b012ea923 986 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 259 598 2.6E-58 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS05320 8022dac5dfb09e39ed2ef06b012ea923 986 SUPERFAMILY SSF56003 245 604 8.64E-110 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS05320 8022dac5dfb09e39ed2ef06b012ea923 986 SUPERFAMILY SSF56003 632 736 8.64E-110 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS05320 8022dac5dfb09e39ed2ef06b012ea923 986 SUPERFAMILY SSF56003 841 985 8.64E-110 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS05320 8022dac5dfb09e39ed2ef06b012ea923 986 Gene3D G3DSA:3.30.365.10 446 545 4.3E-51 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS05320 8022dac5dfb09e39ed2ef06b012ea923 986 Gene3D G3DSA:3.30.365.10 852 985 4.3E-51 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS05320 8022dac5dfb09e39ed2ef06b012ea923 986 SUPERFAMILY SSF54665 46 169 2.62E-13 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS05320 8022dac5dfb09e39ed2ef06b012ea923 986 Gene3D G3DSA:3.30.365.10 546 711 2.3E-21 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS05320 8022dac5dfb09e39ed2ef06b012ea923 986 Gene3D G3DSA:3.30.365.10 835 851 2.3E-21 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS05320 8022dac5dfb09e39ed2ef06b012ea923 986 Gene3D G3DSA:3.30.365.10 369 444 2.1E-8 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS05320 8022dac5dfb09e39ed2ef06b012ea923 986 Gene3D G3DSA:3.90.1170.50 46 166 1.1E-4 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS13940 4632546640c7947fdfea326351f8f5b9 254 Gene3D G3DSA:1.20.120.530 96 228 4.4E-35 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS13940 4632546640c7947fdfea326351f8f5b9 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.2E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS13940 4632546640c7947fdfea326351f8f5b9 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.2E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS13940 4632546640c7947fdfea326351f8f5b9 254 SUPERFAMILY SSF48008 97 226 6.02E-33 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS13940 4632546640c7947fdfea326351f8f5b9 254 SMART SM00895 99 221 6.7E-29 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS13940 4632546640c7947fdfea326351f8f5b9 254 Gene3D G3DSA:1.10.10.10 9 76 6.5E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13940 4632546640c7947fdfea326351f8f5b9 254 SUPERFAMILY SSF46785 8 78 1.1E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13940 4632546640c7947fdfea326351f8f5b9 254 Pfam PF07729 FCD domain 100 219 9.6E-31 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS13940 4632546640c7947fdfea326351f8f5b9 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.8E-20 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS13940 4632546640c7947fdfea326351f8f5b9 254 SMART SM00345 15 74 7.4E-21 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS03755 bb7b429027647d7c3904f73f7239f9af 69 Pfam PF10932 Protein of unknown function (DUF2783) 3 60 3.0E-28 T 09-03-2017 IPR021233 Protein of unknown function DUF2783 NA29_RS06720 61403cf08c4eae5d238d18955b85dca1 306 Gene3D G3DSA:3.40.190.10 180 275 1.4E-18 T 09-03-2017 NA29_RS06720 61403cf08c4eae5d238d18955b85dca1 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 1.3E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06720 61403cf08c4eae5d238d18955b85dca1 306 SUPERFAMILY SSF46785 8 117 4.84E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06720 61403cf08c4eae5d238d18955b85dca1 306 Gene3D G3DSA:3.40.190.10 95 179 6.8E-18 T 09-03-2017 NA29_RS06720 61403cf08c4eae5d238d18955b85dca1 306 SUPERFAMILY SSF53850 95 300 5.58E-39 T 09-03-2017 NA29_RS06720 61403cf08c4eae5d238d18955b85dca1 306 Gene3D G3DSA:1.10.10.10 8 94 2.5E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06720 61403cf08c4eae5d238d18955b85dca1 306 Pfam PF03466 LysR substrate binding domain 94 299 1.0E-37 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS20755 5c7057740471825beb0aa0b99550e08d 248 SMART SM00345 20 79 2.5E-25 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS20755 5c7057740471825beb0aa0b99550e08d 248 SMART SM00895 103 232 4.9E-25 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS20755 5c7057740471825beb0aa0b99550e08d 248 Gene3D G3DSA:1.20.120.530 98 242 1.3E-34 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS20755 5c7057740471825beb0aa0b99550e08d 248 Gene3D G3DSA:1.10.10.10 10 87 7.2E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20755 5c7057740471825beb0aa0b99550e08d 248 Pfam PF07729 FCD domain 104 231 6.8E-26 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS20755 5c7057740471825beb0aa0b99550e08d 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 9.3E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS20755 5c7057740471825beb0aa0b99550e08d 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 9.3E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS20755 5c7057740471825beb0aa0b99550e08d 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 79 1.4E-23 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS20755 5c7057740471825beb0aa0b99550e08d 248 SUPERFAMILY SSF48008 100 240 8.63E-30 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS20755 5c7057740471825beb0aa0b99550e08d 248 SUPERFAMILY SSF46785 11 83 2.92E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08875 1ea9b322509495af9730306a1d673aa3 540 Pfam PF00501 AMP-binding enzyme 20 438 5.9E-82 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS08875 1ea9b322509495af9730306a1d673aa3 540 Gene3D G3DSA:2.30.38.10 357 433 3.1E-18 T 09-03-2017 NA29_RS08875 1ea9b322509495af9730306a1d673aa3 540 Gene3D G3DSA:3.40.50.980 20 193 7.1E-36 T 09-03-2017 NA29_RS08875 1ea9b322509495af9730306a1d673aa3 540 Gene3D G3DSA:3.40.50.980 194 350 7.1E-27 T 09-03-2017 NA29_RS08875 1ea9b322509495af9730306a1d673aa3 540 Pfam PF13193 AMP-binding enzyme C-terminal domain 449 526 1.4E-20 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS08875 1ea9b322509495af9730306a1d673aa3 540 SUPERFAMILY SSF56801 19 537 4.32E-143 T 09-03-2017 NA29_RS08875 1ea9b322509495af9730306a1d673aa3 540 Gene3D G3DSA:3.30.300.30 436 537 3.6E-30 T 09-03-2017 NA29_RS08875 1ea9b322509495af9730306a1d673aa3 540 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS14055 f683239174f2a2f0b8ee291f18cfbab2 375 Gene3D G3DSA:2.130.10.10 8 372 3.6E-70 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NA29_RS14055 f683239174f2a2f0b8ee291f18cfbab2 375 Pfam PF15902 Sortilin, neurotensin receptor 3, 133 269 8.4E-9 T 09-03-2017 IPR031778 Sortilin, N-terminal NA29_RS14055 f683239174f2a2f0b8ee291f18cfbab2 375 SUPERFAMILY SSF110296 9 360 2.88E-49 T 09-03-2017 NA29_RS08610 5e0142314cb46a452151b097b92d39b4 335 Gene3D G3DSA:3.40.50.1980 56 148 5.9E-29 T 09-03-2017 NA29_RS08610 5e0142314cb46a452151b097b92d39b4 335 Pfam PF01497 Periplasmic binding protein 62 300 3.0E-22 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 NA29_RS08610 5e0142314cb46a452151b097b92d39b4 335 SUPERFAMILY SSF53807 56 313 5.49E-46 T 09-03-2017 NA29_RS08610 5e0142314cb46a452151b097b92d39b4 335 Gene3D G3DSA:3.40.50.1980 157 320 3.2E-30 T 09-03-2017 NA29_RS01915 652548831bd215cc8666db230c1f7d8a 145 PIRSF PIRSF014972 3 142 3.2E-43 T 09-03-2017 IPR025540 Fluoroacetyl-CoA thioesterase NA29_RS01915 652548831bd215cc8666db230c1f7d8a 145 Gene3D G3DSA:3.10.129.10 38 140 8.3E-25 T 09-03-2017 IPR029069 HotDog domain NA29_RS01915 652548831bd215cc8666db230c1f7d8a 145 SUPERFAMILY SSF54637 4 140 9.86E-34 T 09-03-2017 IPR029069 HotDog domain NA29_RS17115 9db3aa46c1018f9ef3dfa145f532c7aa 426 SUPERFAMILY SSF142764 4 414 1.31E-77 T 09-03-2017 NA29_RS17115 9db3aa46c1018f9ef3dfa145f532c7aa 426 Pfam PF07005 Putative sugar-binding N-terminal domain 4 223 1.3E-45 T 09-03-2017 IPR010737 Putative sugar-binding, N-terminal domain NA29_RS17115 9db3aa46c1018f9ef3dfa145f532c7aa 426 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 256 407 1.5E-23 T 09-03-2017 IPR031475 Putative nucleotide-binding C-terminal domain NA29_RS01175 47f41a858d3cd9d77ad0a9bc8f7820ba 316 SUPERFAMILY SSF54292 205 315 9.83E-31 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS01175 47f41a858d3cd9d77ad0a9bc8f7820ba 316 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 235 306 1.1E-12 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS01175 47f41a858d3cd9d77ad0a9bc8f7820ba 316 SUPERFAMILY SSF52343 95 213 2.1E-26 T 09-03-2017 NA29_RS01175 47f41a858d3cd9d77ad0a9bc8f7820ba 316 Gene3D G3DSA:3.40.50.80 96 210 8.2E-25 T 09-03-2017 NA29_RS01175 47f41a858d3cd9d77ad0a9bc8f7820ba 316 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 265 273 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NA29_RS01175 47f41a858d3cd9d77ad0a9bc8f7820ba 316 Gene3D G3DSA:3.10.20.30 211 314 3.3E-29 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS01175 47f41a858d3cd9d77ad0a9bc8f7820ba 316 PRINTS PR00409 Phthalate dioxygenase reductase family signature 35 47 5.8E-44 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS01175 47f41a858d3cd9d77ad0a9bc8f7820ba 316 PRINTS PR00409 Phthalate dioxygenase reductase family signature 131 140 5.8E-44 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS01175 47f41a858d3cd9d77ad0a9bc8f7820ba 316 PRINTS PR00409 Phthalate dioxygenase reductase family signature 47 61 5.8E-44 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS01175 47f41a858d3cd9d77ad0a9bc8f7820ba 316 PRINTS PR00409 Phthalate dioxygenase reductase family signature 84 98 5.8E-44 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS01175 47f41a858d3cd9d77ad0a9bc8f7820ba 316 PRINTS PR00409 Phthalate dioxygenase reductase family signature 106 125 5.8E-44 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS01175 47f41a858d3cd9d77ad0a9bc8f7820ba 316 PRINTS PR00409 Phthalate dioxygenase reductase family signature 25 35 5.8E-44 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS01175 47f41a858d3cd9d77ad0a9bc8f7820ba 316 PRINTS PR00409 Phthalate dioxygenase reductase family signature 183 191 5.8E-44 T 09-03-2017 IPR000951 Phthalate dioxygenase reductase GO:0016491 NA29_RS01175 47f41a858d3cd9d77ad0a9bc8f7820ba 316 SUPERFAMILY SSF63380 2 94 1.65E-24 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS01175 47f41a858d3cd9d77ad0a9bc8f7820ba 316 Gene3D G3DSA:2.40.30.10 2 95 1.5E-31 T 09-03-2017 NA29_RS12645 898ea81fbb53ff7c3498c8a670340afb 427 SMART SM00267 217 389 1.6E-55 T 09-03-2017 IPR000160 GGDEF domain NA29_RS12645 898ea81fbb53ff7c3498c8a670340afb 427 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 224 387 8.5E-49 T 09-03-2017 IPR000160 GGDEF domain NA29_RS12645 898ea81fbb53ff7c3498c8a670340afb 427 SUPERFAMILY SSF55073 233 391 2.35E-46 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS12645 898ea81fbb53ff7c3498c8a670340afb 427 Pfam PF00990 Diguanylate cyclase, GGDEF domain 228 385 4.3E-43 T 09-03-2017 IPR000160 GGDEF domain NA29_RS12645 898ea81fbb53ff7c3498c8a670340afb 427 Gene3D G3DSA:3.30.70.270 230 393 2.3E-52 T 09-03-2017 NA29_RS17855 3b64eda3e6c01e3010a9757589ec9d6c 873 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 595 644 9.8E-10 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NA29_RS17855 3b64eda3e6c01e3010a9757589ec9d6c 873 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 700 745 2.7E-13 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NA29_RS17855 3b64eda3e6c01e3010a9757589ec9d6c 873 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 751 797 2.6E-11 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NA29_RS17855 3b64eda3e6c01e3010a9757589ec9d6c 873 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 801 838 2.1E-11 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NA29_RS17855 3b64eda3e6c01e3010a9757589ec9d6c 873 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 545 591 2.5E-11 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NA29_RS17855 3b64eda3e6c01e3010a9757589ec9d6c 873 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 653 695 3.3E-7 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 NA29_RS17855 3b64eda3e6c01e3010a9757589ec9d6c 873 Gene3D G3DSA:3.30.1360.40 236 333 2.2E-40 T 09-03-2017 IPR024946 Arginine repressor C-terminal-like domain NA29_RS17855 3b64eda3e6c01e3010a9757589ec9d6c 873 SUPERFAMILY SSF101904 540 856 1.14E-110 T 09-03-2017 NA29_RS17855 3b64eda3e6c01e3010a9757589ec9d6c 873 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 847 0.0 T 09-03-2017 NA29_RS17855 3b64eda3e6c01e3010a9757589ec9d6c 873 Gene3D G3DSA:2.120.10.90 538 847 4.0E-134 T 09-03-2017 NA29_RS17855 3b64eda3e6c01e3010a9757589ec9d6c 873 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 7 849 24.211 T 09-03-2017 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NA29_RS17855 3b64eda3e6c01e3010a9757589ec9d6c 873 Gene3D G3DSA:3.90.199.10 34 216 5.8E-84 T 09-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 NA29_RS17855 3b64eda3e6c01e3010a9757589ec9d6c 873 SUPERFAMILY SSF56719 30 528 3.01E-178 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 NA29_RS17855 3b64eda3e6c01e3010a9757589ec9d6c 873 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 513 7.6E-152 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS17855 3b64eda3e6c01e3010a9757589ec9d6c 873 SMART SM00434 11 506 1.1E-284 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS17855 3b64eda3e6c01e3010a9757589ec9d6c 873 Gene3D G3DSA:1.10.268.10 363 502 1.4E-47 T 09-03-2017 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS13075 9db3b9b35e1627297dbee66517ec8b39 303 PRINTS PR00412 Epoxide hydrolase signature 273 295 8.4E-5 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS13075 9db3b9b35e1627297dbee66517ec8b39 303 PRINTS PR00412 Epoxide hydrolase signature 106 119 8.4E-5 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS13075 9db3b9b35e1627297dbee66517ec8b39 303 PRINTS PR00412 Epoxide hydrolase signature 38 56 8.4E-5 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS13075 9db3b9b35e1627297dbee66517ec8b39 303 PRINTS PR00412 Epoxide hydrolase signature 120 133 8.4E-5 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS13075 9db3b9b35e1627297dbee66517ec8b39 303 Pfam PF00561 alpha/beta hydrolase fold 32 149 1.8E-22 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS13075 9db3b9b35e1627297dbee66517ec8b39 303 Gene3D G3DSA:3.40.50.1820 5 296 3.4E-64 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS13075 9db3b9b35e1627297dbee66517ec8b39 303 SUPERFAMILY SSF53474 4 296 4.61E-70 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS04085 1c078c357aaa9710471d28fb08fe6a7f 303 Gene3D G3DSA:3.40.190.10 176 262 1.0E-17 T 09-03-2017 NA29_RS04085 1c078c357aaa9710471d28fb08fe6a7f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04085 1c078c357aaa9710471d28fb08fe6a7f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04085 1c078c357aaa9710471d28fb08fe6a7f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04085 1c078c357aaa9710471d28fb08fe6a7f 303 Gene3D G3DSA:3.40.190.10 89 175 3.2E-18 T 09-03-2017 NA29_RS04085 1c078c357aaa9710471d28fb08fe6a7f 303 Gene3D G3DSA:1.10.10.10 2 87 3.1E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04085 1c078c357aaa9710471d28fb08fe6a7f 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 7.4E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04085 1c078c357aaa9710471d28fb08fe6a7f 303 SUPERFAMILY SSF53850 90 294 2.29E-34 T 09-03-2017 NA29_RS04085 1c078c357aaa9710471d28fb08fe6a7f 303 Pfam PF03466 LysR substrate binding domain 89 289 2.6E-33 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS04085 1c078c357aaa9710471d28fb08fe6a7f 303 SUPERFAMILY SSF46785 2 81 2.88E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10990 014a53e697ef69e0922e4405c56b99a7 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 74 7.7E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10990 014a53e697ef69e0922e4405c56b99a7 310 Gene3D G3DSA:1.10.10.10 15 92 2.8E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10990 014a53e697ef69e0922e4405c56b99a7 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 1.9E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10990 014a53e697ef69e0922e4405c56b99a7 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 1.9E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10990 014a53e697ef69e0922e4405c56b99a7 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 1.9E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10990 014a53e697ef69e0922e4405c56b99a7 310 Gene3D G3DSA:3.40.190.10 103 185 1.8E-22 T 09-03-2017 NA29_RS10990 014a53e697ef69e0922e4405c56b99a7 310 SUPERFAMILY SSF46785 15 95 1.09E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10990 014a53e697ef69e0922e4405c56b99a7 310 Gene3D G3DSA:3.40.190.10 186 275 1.5E-16 T 09-03-2017 NA29_RS10990 014a53e697ef69e0922e4405c56b99a7 310 SUPERFAMILY SSF53850 101 309 9.31E-44 T 09-03-2017 NA29_RS10990 014a53e697ef69e0922e4405c56b99a7 310 Pfam PF03466 LysR substrate binding domain 100 305 4.1E-41 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS03020 2482c6a8462bc4963d5a9ae546763247 170 SUPERFAMILY SSF50249 3 170 6.17E-63 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS03020 2482c6a8462bc4963d5a9ae546763247 170 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 38.732 T 09-03-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 NA29_RS03020 2482c6a8462bc4963d5a9ae546763247 170 Pfam PF00436 Single-strand binding protein family 4 108 1.3E-42 T 09-03-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 NA29_RS03020 2482c6a8462bc4963d5a9ae546763247 170 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 170 9.9E-55 T 09-03-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 NA29_RS03020 2482c6a8462bc4963d5a9ae546763247 170 Gene3D G3DSA:2.40.50.140 1 170 1.6E-60 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS13410 cf2ce0246908676c9c9b5a5b3ceaf752 303 Pfam PF00892 EamA-like transporter family 9 136 8.7E-18 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS13410 cf2ce0246908676c9c9b5a5b3ceaf752 303 Pfam PF00892 EamA-like transporter family 149 288 2.4E-10 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS13410 cf2ce0246908676c9c9b5a5b3ceaf752 303 SUPERFAMILY SSF103481 40 139 3.79E-14 T 09-03-2017 NA29_RS13410 cf2ce0246908676c9c9b5a5b3ceaf752 303 SUPERFAMILY SSF103481 191 292 4.32E-11 T 09-03-2017 NA29_RS23575 801654caf8493bcac912192246c831ea 385 Gene3D G3DSA:3.30.9.10 164 310 7.9E-23 T 09-03-2017 NA29_RS23575 801654caf8493bcac912192246c831ea 385 SUPERFAMILY SSF54373 221 310 6.93E-17 T 09-03-2017 NA29_RS23575 801654caf8493bcac912192246c831ea 385 Gene3D G3DSA:3.50.50.60 14 56 2.1E-8 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS23575 801654caf8493bcac912192246c831ea 385 Pfam PF01266 FAD dependent oxidoreductase 18 346 4.5E-36 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS23575 801654caf8493bcac912192246c831ea 385 SUPERFAMILY SSF51905 312 372 2.68E-28 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS23575 801654caf8493bcac912192246c831ea 385 SUPERFAMILY SSF51905 17 228 2.68E-28 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS15825 03160c6aafb18b48045d46cb16e3b5a2 239 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 57 211 3.1E-37 T 09-03-2017 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 NA29_RS17525 6704f0a3e3c4726d4c6385684cffbe32 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS17525 6704f0a3e3c4726d4c6385684cffbe32 477 Pfam PF00171 Aldehyde dehydrogenase family 15 472 8.0E-160 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS17525 6704f0a3e3c4726d4c6385684cffbe32 477 Gene3D G3DSA:3.40.605.10 15 258 2.1E-91 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS17525 6704f0a3e3c4726d4c6385684cffbe32 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS17525 6704f0a3e3c4726d4c6385684cffbe32 477 Gene3D G3DSA:3.40.309.10 259 447 3.0E-59 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS17525 6704f0a3e3c4726d4c6385684cffbe32 477 SUPERFAMILY SSF53720 14 476 9.69E-153 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS11535 60ea406956eec9c0a418970b7080e46e 435 Gene3D G3DSA:1.20.1250.20 37 223 5.1E-35 T 09-03-2017 NA29_RS11535 60ea406956eec9c0a418970b7080e46e 435 Gene3D G3DSA:1.20.1250.20 247 424 1.8E-26 T 09-03-2017 NA29_RS11535 60ea406956eec9c0a418970b7080e46e 435 Pfam PF07690 Major Facilitator Superfamily 44 273 4.0E-29 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS11535 60ea406956eec9c0a418970b7080e46e 435 SUPERFAMILY SSF103473 32 277 5.36E-40 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS11535 60ea406956eec9c0a418970b7080e46e 435 SUPERFAMILY SSF103473 233 422 3.01E-27 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS11535 60ea406956eec9c0a418970b7080e46e 435 PRINTS PR01035 Tetracycline resistance protein signature 138 159 1.0E-7 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NA29_RS11535 60ea406956eec9c0a418970b7080e46e 435 PRINTS PR01035 Tetracycline resistance protein signature 49 65 1.0E-7 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NA29_RS11535 60ea406956eec9c0a418970b7080e46e 435 PRINTS PR01035 Tetracycline resistance protein signature 168 190 1.0E-7 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NA29_RS11535 60ea406956eec9c0a418970b7080e46e 435 PRINTS PR01035 Tetracycline resistance protein signature 374 397 1.0E-7 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NA29_RS11465 1e350b4a026980d8a128686534a6db9d 191 Gene3D G3DSA:3.40.50.450 33 152 1.3E-26 T 09-03-2017 NA29_RS11465 1e350b4a026980d8a128686534a6db9d 191 Pfam PF03641 Possible lysine decarboxylase 73 145 3.4E-5 T 09-03-2017 IPR031100 LOG family NA29_RS11465 1e350b4a026980d8a128686534a6db9d 191 TIGRFAM TIGR00725 TIGR00725: TIGR00725 family protein 33 157 7.5E-34 T 09-03-2017 IPR005268 Conserved hypothetical protein CHP00725 NA29_RS11465 1e350b4a026980d8a128686534a6db9d 191 SUPERFAMILY SSF102405 30 152 1.13E-29 T 09-03-2017 NA29_RS02935 8f7780a3f985cd16fb9976b6f1653ed3 30 Pfam PF12951 Passenger-associated-transport-repeat 4 29 7.2E-7 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02935 8f7780a3f985cd16fb9976b6f1653ed3 30 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 4 30 2.5E-7 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS19560 2641fa166fe45b855bfd4d780518ce63 499 SUPERFAMILY SSF52540 86 372 1.77E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19560 2641fa166fe45b855bfd4d780518ce63 499 Pfam PF00270 DEAD/DEAH box helicase 34 208 3.8E-54 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NA29_RS19560 2641fa166fe45b855bfd4d780518ce63 499 Pfam PF00271 Helicase conserved C-terminal domain 243 351 2.7E-28 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS19560 2641fa166fe45b855bfd4d780518ce63 499 SMART SM00490 270 351 8.6E-33 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS19560 2641fa166fe45b855bfd4d780518ce63 499 SMART SM00487 29 234 1.0E-65 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain NA29_RS19560 2641fa166fe45b855bfd4d780518ce63 499 Gene3D G3DSA:3.40.50.300 8 224 1.5E-88 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19560 2641fa166fe45b855bfd4d780518ce63 499 Gene3D G3DSA:3.40.50.300 225 388 2.7E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19560 2641fa166fe45b855bfd4d780518ce63 499 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 165 173 - T 09-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site NA29_RS17080 8bf20648316fb306fa9b731c647abe45 333 Pfam PF12852 Cupin 3 196 1.7E-26 T 09-03-2017 IPR032783 AraC-type transcription regulator, ligand-binding domain NA29_RS17080 8bf20648316fb306fa9b731c647abe45 333 SUPERFAMILY SSF46689 265 317 1.84E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS17080 8bf20648316fb306fa9b731c647abe45 333 SMART SM00342 229 312 1.4E-24 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS17080 8bf20648316fb306fa9b731c647abe45 333 Gene3D G3DSA:2.60.120.10 40 80 2.7E-5 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS17080 8bf20648316fb306fa9b731c647abe45 333 SUPERFAMILY SSF51182 38 78 1.59E-5 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS17080 8bf20648316fb306fa9b731c647abe45 333 SUPERFAMILY SSF46689 213 262 1.61E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS17080 8bf20648316fb306fa9b731c647abe45 333 Gene3D G3DSA:1.10.10.60 266 316 1.1E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS17080 8bf20648316fb306fa9b731c647abe45 333 Gene3D G3DSA:1.10.10.60 211 265 4.2E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS17080 8bf20648316fb306fa9b731c647abe45 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 296 312 7.6E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS17080 8bf20648316fb306fa9b731c647abe45 333 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 296 7.6E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS17080 8bf20648316fb306fa9b731c647abe45 333 Pfam PF12833 Helix-turn-helix domain 235 314 1.5E-18 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS01355 80b743fbfb2ce8f7285abe466d32f395 338 SMART SM00382 54 246 3.3E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS01355 80b743fbfb2ce8f7285abe466d32f395 338 Pfam PF00005 ABC transporter 45 196 1.8E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS01355 80b743fbfb2ce8f7285abe466d32f395 338 Gene3D G3DSA:3.40.50.300 20 270 3.2E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01355 80b743fbfb2ce8f7285abe466d32f395 338 SUPERFAMILY SSF52540 20 268 1.89E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01355 80b743fbfb2ce8f7285abe466d32f395 338 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS01355 80b743fbfb2ce8f7285abe466d32f395 338 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 313 1.3E-18 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS01355 80b743fbfb2ce8f7285abe466d32f395 338 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 247 331 9.5E-26 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS18850 99459bf2f6a31f30420b6f9c1bc186c6 483 Gene3D G3DSA:3.40.605.10 2 265 2.7E-82 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS18850 99459bf2f6a31f30420b6f9c1bc186c6 483 SUPERFAMILY SSF53720 2 478 1.44E-153 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS18850 99459bf2f6a31f30420b6f9c1bc186c6 483 Pfam PF00171 Aldehyde dehydrogenase family 12 472 5.9E-151 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS18850 99459bf2f6a31f30420b6f9c1bc186c6 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS18850 99459bf2f6a31f30420b6f9c1bc186c6 483 Gene3D G3DSA:3.40.309.10 266 448 3.7E-65 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 Pfam PF00175 Oxidoreductase NAD-binding domain 209 314 3.5E-21 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 Gene3D G3DSA:3.40.50.80 201 334 4.6E-40 T 09-03-2017 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 Gene3D G3DSA:2.40.30.10 102 199 9.0E-33 T 09-03-2017 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 SUPERFAMILY SSF63380 102 199 2.87E-25 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 79 1.8E-15 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 300 308 2.3E-21 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 2.3E-21 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 208 227 2.3E-21 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 148 155 2.3E-21 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 192 201 2.3E-21 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 233 242 2.3E-21 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 Pfam PF00970 Oxidoreductase FAD-binding domain 105 197 3.8E-17 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 SUPERFAMILY SSF54292 1 89 8.39E-26 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 Gene3D G3DSA:3.10.20.30 2 93 2.9E-28 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 300 308 1.8E-6 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 148 155 1.8E-6 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 233 242 1.8E-6 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 208 227 1.8E-6 T 09-03-2017 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 NA29_RS19825 a227edcc2ec35f17073532b9e67eb364 344 SUPERFAMILY SSF52343 200 334 5.89E-39 T 09-03-2017 NA29_RS00675 786e98f641aa1a64c2d1468f6c31ea64 688 Pfam PF02554 Carbon starvation protein CstA 32 408 1.2E-171 T 09-03-2017 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 NA29_RS00675 786e98f641aa1a64c2d1468f6c31ea64 688 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 1.6E-34 T 09-03-2017 IPR025299 CstA, C-terminal domain NA29_RS08305 c045cba26c64c072ee22c05c513d1c73 269 SMART SM01007 39 218 1.0E-42 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS08305 c045cba26c64c072ee22c05c513d1c73 269 SUPERFAMILY SSF53639 33 248 3.92E-56 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS08305 c045cba26c64c072ee22c05c513d1c73 269 Gene3D G3DSA:3.40.225.10 37 243 3.2E-54 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS08305 c045cba26c64c072ee22c05c513d1c73 269 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 40 218 9.3E-40 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS07495 30fbf53cfcd5a925d93f161c0641b6ac 327 SUPERFAMILY SSF103481 73 158 2.22E-5 T 09-03-2017 NA29_RS07495 30fbf53cfcd5a925d93f161c0641b6ac 327 Pfam PF00892 EamA-like transporter family 171 311 2.2E-11 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS07495 30fbf53cfcd5a925d93f161c0641b6ac 327 Pfam PF00892 EamA-like transporter family 34 155 2.1E-7 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS07495 30fbf53cfcd5a925d93f161c0641b6ac 327 SUPERFAMILY SSF103481 235 317 1.83E-8 T 09-03-2017 NA29_RS25045 a347c5e6e74180111df341a0c56ce3c9 198 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 187 47.124 T 09-03-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 NA29_RS25045 a347c5e6e74180111df341a0c56ce3c9 198 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 170 8.0E-79 T 09-03-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 NA29_RS25045 a347c5e6e74180111df341a0c56ce3c9 198 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 172 6.6E-86 T 09-03-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 NA29_RS25045 a347c5e6e74180111df341a0c56ce3c9 198 SUPERFAMILY SSF160930 6 160 5.23E-66 T 09-03-2017 NA29_RS25045 a347c5e6e74180111df341a0c56ce3c9 198 PIRSF PIRSF003159 1 181 2.1E-92 T 09-03-2017 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 NA29_RS14560 52f8e3abb5ae9dc33d572506caf45824 420 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 6.5E-31 T 09-03-2017 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 NA29_RS14560 52f8e3abb5ae9dc33d572506caf45824 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 243.408 T 09-03-2017 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 NA29_RS14560 52f8e3abb5ae9dc33d572506caf45824 420 Gene3D G3DSA:2.40.50.140 49 117 6.5E-34 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS14560 52f8e3abb5ae9dc33d572506caf45824 420 SUPERFAMILY SSF52540 90 371 1.58E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14560 52f8e3abb5ae9dc33d572506caf45824 420 SUPERFAMILY SSF50249 49 125 1.37E-28 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS14560 52f8e3abb5ae9dc33d572506caf45824 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 3.3E-209 T 09-03-2017 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 NA29_RS14560 52f8e3abb5ae9dc33d572506caf45824 420 SMART SM00382 170 349 8.2E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS14560 52f8e3abb5ae9dc33d572506caf45824 420 Gene3D G3DSA:1.10.720.10 1 47 3.8E-22 T 09-03-2017 NA29_RS14560 52f8e3abb5ae9dc33d572506caf45824 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.8E-21 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS14560 52f8e3abb5ae9dc33d572506caf45824 420 SUPERFAMILY SSF68912 1 46 1.77E-12 T 09-03-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 NA29_RS14560 52f8e3abb5ae9dc33d572506caf45824 420 Gene3D G3DSA:3.40.50.300 131 418 3.1E-103 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14560 52f8e3abb5ae9dc33d572506caf45824 420 SMART SM00357 52 118 1.3E-17 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 NA29_RS14560 52f8e3abb5ae9dc33d572506caf45824 420 SMART SM00959 5 47 1.3E-17 T 09-03-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 NA29_RS14560 52f8e3abb5ae9dc33d572506caf45824 420 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 7.4E-17 T 09-03-2017 IPR011112 Rho termination factor, N-terminal GO:0006353 NA29_RS20490 379c9c9d8e09e0ed0186f851037d4041 118 SUPERFAMILY SSF49503 17 117 8.2E-15 T 09-03-2017 IPR008972 Cupredoxin NA29_RS20490 379c9c9d8e09e0ed0186f851037d4041 118 Pfam PF13473 Cupredoxin-like domain 13 117 2.8E-30 T 09-03-2017 IPR028096 EfeO-type cupredoxin-like domain NA29_RS20490 379c9c9d8e09e0ed0186f851037d4041 118 Gene3D G3DSA:2.60.40.420 24 116 2.1E-8 T 09-03-2017 IPR008972 Cupredoxin NA29_RS20520 aba6566f4ac3a3c4030a079918299966 265 Gene3D G3DSA:3.40.190.10 112 206 6.5E-16 T 09-03-2017 NA29_RS20520 aba6566f4ac3a3c4030a079918299966 265 SMART SM00062 36 255 2.1E-46 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS20520 aba6566f4ac3a3c4030a079918299966 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 253 1.2E-49 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS20520 aba6566f4ac3a3c4030a079918299966 265 SMART SM00079 36 252 0.008 T 09-03-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 NA29_RS20520 aba6566f4ac3a3c4030a079918299966 265 SUPERFAMILY SSF53850 9 255 5.0E-56 T 09-03-2017 NA29_RS20520 aba6566f4ac3a3c4030a079918299966 265 Gene3D G3DSA:3.40.190.10 31 111 1.6E-32 T 09-03-2017 NA29_RS20520 aba6566f4ac3a3c4030a079918299966 265 Gene3D G3DSA:3.40.190.10 210 252 1.6E-32 T 09-03-2017 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 Gene3D G3DSA:3.40.30.10 103 197 9.7E-34 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 SUPERFAMILY SSF51905 203 510 5.19E-49 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 512 4.4E-239 T 09-03-2017 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 Gene3D G3DSA:3.40.30.10 1 94 2.7E-33 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 500 1.3E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 Gene3D G3DSA:3.50.50.60 213 315 2.5E-22 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 341 361 - T 09-03-2017 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 SUPERFAMILY SSF52833 104 197 1.86E-20 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 Pfam PF13192 Thioredoxin domain 125 194 1.0E-7 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 SUPERFAMILY SSF52833 1 101 3.87E-31 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 4.1E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 440 461 4.1E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 474 492 4.1E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 312 320 4.1E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 401 417 4.1E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 4.1E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 349 373 4.1E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 4.1E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 334 346 4.1E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 PIRSF PIRSF000238 1 517 6.0E-257 T 09-03-2017 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 311 329 1.7E-40 T 09-03-2017 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 464 486 1.7E-40 T 09-03-2017 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 1.7E-40 T 09-03-2017 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 353 371 1.7E-40 T 09-03-2017 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 438 454 1.7E-40 T 09-03-2017 NA29_RS18705 24ec3ebbddff21f5ebbaa8a1f89cbfc7 530 Gene3D G3DSA:3.50.50.60 316 506 1.1E-40 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS15175 cd8a0f1623e82b1aafa07964d1ec7bef 302 Pfam PF12697 Alpha/beta hydrolase family 37 294 1.1E-20 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS15175 cd8a0f1623e82b1aafa07964d1ec7bef 302 Gene3D G3DSA:3.40.50.1820 7 301 1.8E-61 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS15175 cd8a0f1623e82b1aafa07964d1ec7bef 302 SUPERFAMILY SSF53474 8 301 7.04E-52 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS15175 cd8a0f1623e82b1aafa07964d1ec7bef 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 8.8E-8 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS15175 cd8a0f1623e82b1aafa07964d1ec7bef 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 8.8E-8 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS15175 cd8a0f1623e82b1aafa07964d1ec7bef 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 8.8E-8 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS21795 af100482f01069d68f8f0413fb424fb2 405 Gene3D G3DSA:3.90.1150.10 284 398 2.0E-29 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS21795 af100482f01069d68f8f0413fb424fb2 405 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 13 402 1.2E-191 T 09-03-2017 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 NA29_RS21795 af100482f01069d68f8f0413fb424fb2 405 Pfam PF00155 Aminotransferase class I and II 52 391 7.1E-64 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS21795 af100482f01069d68f8f0413fb424fb2 405 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 9 400 49.993 T 09-03-2017 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 NA29_RS21795 af100482f01069d68f8f0413fb424fb2 405 SUPERFAMILY SSF53383 12 400 2.24E-115 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS21795 af100482f01069d68f8f0413fb424fb2 405 Gene3D G3DSA:3.40.640.10 67 283 4.2E-90 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS25240 63b5d2be4c2e32d9696cbbd6e9828592 1201 SUPERFAMILY SSF52518 443 627 9.42E-13 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS25240 63b5d2be4c2e32d9696cbbd6e9828592 1201 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 741 927 1.9E-19 T 09-03-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 NA29_RS25240 63b5d2be4c2e32d9696cbbd6e9828592 1201 SUPERFAMILY SSF53323 733 981 5.36E-29 T 09-03-2017 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 NA29_RS25240 63b5d2be4c2e32d9696cbbd6e9828592 1201 Gene3D G3DSA:3.40.50.970 494 676 6.1E-11 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS25240 63b5d2be4c2e32d9696cbbd6e9828592 1201 SUPERFAMILY SSF52518 30 208 1.0E-14 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS25240 63b5d2be4c2e32d9696cbbd6e9828592 1201 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 464 547 5.5E-5 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NA29_RS25240 63b5d2be4c2e32d9696cbbd6e9828592 1201 Gene3D G3DSA:3.40.920.10 733 927 2.2E-18 T 09-03-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 NA29_RS06580 2b53639014c46e29bfa861c441ef7699 215 Gene3D G3DSA:1.10.357.10 7 189 4.8E-23 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS06580 2b53639014c46e29bfa861c441ef7699 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.2E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS06580 2b53639014c46e29bfa861c441ef7699 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.2E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS06580 2b53639014c46e29bfa861c441ef7699 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 55 - T 09-03-2017 IPR023772 DNA-binding HTH domain, TetR-type, conserved site NA29_RS06580 2b53639014c46e29bfa861c441ef7699 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 5.4E-12 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS06580 2b53639014c46e29bfa861c441ef7699 215 SUPERFAMILY SSF46689 3 79 2.84E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS00955 cd39fe54b0fcef12536dd61175802c8e 322 PIRSF PIRSF038471 6 286 1.2E-69 T 09-03-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 NA29_RS00955 cd39fe54b0fcef12536dd61175802c8e 322 Pfam PF04085 rod shape-determining protein MreC 131 273 1.4E-36 T 09-03-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 NA29_RS00955 cd39fe54b0fcef12536dd61175802c8e 322 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 9 275 3.8E-49 T 09-03-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 NA29_RS09125 b7b373e77e8db8250b516606348f053b 69 Pfam PF13490 Putative zinc-finger 6 40 5.0E-8 T 09-03-2017 IPR027383 Putative zinc-finger NA29_RS00525 2f5bfada667e090e948bdae6755ef6c4 450 Gene3D G3DSA:3.40.190.10 52 115 1.3E-4 T 09-03-2017 NA29_RS00525 2f5bfada667e090e948bdae6755ef6c4 450 SUPERFAMILY SSF53850 51 327 1.56E-43 T 09-03-2017 NA29_RS00525 2f5bfada667e090e948bdae6755ef6c4 450 Pfam PF16868 NMT1-like family 77 305 6.3E-15 T 09-03-2017 IPR011852 TRAP transporter solute receptor, TAXI family NA29_RS00525 2f5bfada667e090e948bdae6755ef6c4 450 Gene3D G3DSA:3.40.190.10 143 268 7.2E-19 T 09-03-2017 NA29_RS04415 9d96cb7f28eb1546c4a2735e59e182dd 481 Pfam PF00474 Sodium:solute symporter family 30 425 2.3E-33 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NA29_RS11310 0e9b7c2ab8d55ad709acc2b1920b869e 253 SMART SM00382 33 214 6.3E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS11310 0e9b7c2ab8d55ad709acc2b1920b869e 253 SUPERFAMILY SSF52540 1 236 5.03E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11310 0e9b7c2ab8d55ad709acc2b1920b869e 253 Pfam PF00005 ABC transporter 24 163 4.0E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS11310 0e9b7c2ab8d55ad709acc2b1920b869e 253 Gene3D G3DSA:3.40.50.300 1 218 1.0E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11310 0e9b7c2ab8d55ad709acc2b1920b869e 253 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS04040 89be7c60bf6e9528c9da384bb4369b6d 314 SUPERFAMILY SSF51412 2 308 1.33E-61 T 09-03-2017 NA29_RS04040 89be7c60bf6e9528c9da384bb4369b6d 314 Gene3D G3DSA:3.20.20.70 2 298 6.4E-60 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS04040 89be7c60bf6e9528c9da384bb4369b6d 314 Pfam PF03060 Nitronate monooxygenase 4 78 1.1E-17 T 09-03-2017 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 NA29_RS04040 89be7c60bf6e9528c9da384bb4369b6d 314 Pfam PF03060 Nitronate monooxygenase 83 304 5.9E-39 T 09-03-2017 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 NA29_RS03115 3640545924e70b145cb40b3e2bba4b3d 234 Gene3D G3DSA:1.20.120.530 91 229 4.0E-36 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS03115 3640545924e70b145cb40b3e2bba4b3d 234 SUPERFAMILY SSF46785 24 92 1.86E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03115 3640545924e70b145cb40b3e2bba4b3d 234 Gene3D G3DSA:1.10.10.10 22 90 1.1E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03115 3640545924e70b145cb40b3e2bba4b3d 234 SMART SM00895 98 219 1.6E-17 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS03115 3640545924e70b145cb40b3e2bba4b3d 234 SMART SM00345 30 88 2.7E-18 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS03115 3640545924e70b145cb40b3e2bba4b3d 234 SUPERFAMILY SSF48008 94 227 3.92E-27 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS03115 3640545924e70b145cb40b3e2bba4b3d 234 Pfam PF07729 FCD domain 98 218 1.3E-23 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS03115 3640545924e70b145cb40b3e2bba4b3d 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 88 1.5E-17 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS17930 f4468d1f96bca33503c40f00fa6be3c2 557 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 123 133 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS17930 f4468d1f96bca33503c40f00fa6be3c2 557 Pfam PF00920 Dehydratase family 36 553 7.2E-202 T 09-03-2017 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS17930 f4468d1f96bca33503c40f00fa6be3c2 557 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 5 557 43.426 T 09-03-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS17930 f4468d1f96bca33503c40f00fa6be3c2 557 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 09-03-2017 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS17930 f4468d1f96bca33503c40f00fa6be3c2 557 SUPERFAMILY SSF52016 380 555 7.53E-56 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS17930 f4468d1f96bca33503c40f00fa6be3c2 557 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 555 3.7E-223 T 09-03-2017 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 NA29_RS17930 f4468d1f96bca33503c40f00fa6be3c2 557 SUPERFAMILY SSF143975 3 378 5.62E-131 T 09-03-2017 NA29_RS17410 6c46d93e624182f579a36c514eea8197 444 Pfam PF07690 Major Facilitator Superfamily 21 385 4.4E-40 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS17410 6c46d93e624182f579a36c514eea8197 444 Gene3D G3DSA:1.20.1250.20 15 213 4.6E-37 T 09-03-2017 NA29_RS17410 6c46d93e624182f579a36c514eea8197 444 Gene3D G3DSA:1.20.1250.20 243 427 8.6E-20 T 09-03-2017 NA29_RS17410 6c46d93e624182f579a36c514eea8197 444 SUPERFAMILY SSF103473 5 424 3.01E-76 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS09360 140726b9bd64c06f358947166b5178e4 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.1E-38 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS09360 140726b9bd64c06f358947166b5178e4 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.1E-38 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS09360 140726b9bd64c06f358947166b5178e4 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.1E-38 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS09360 140726b9bd64c06f358947166b5178e4 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS09360 140726b9bd64c06f358947166b5178e4 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.678 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS09360 140726b9bd64c06f358947166b5178e4 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 7.7E-49 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS09360 140726b9bd64c06f358947166b5178e4 119 Gene3D G3DSA:1.10.1900.20 55 117 6.6E-30 T 09-03-2017 NA29_RS09360 140726b9bd64c06f358947166b5178e4 119 Pfam PF00453 Ribosomal protein L20 3 109 6.3E-49 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS09360 140726b9bd64c06f358947166b5178e4 119 SUPERFAMILY SSF74731 2 116 8.24E-49 T 09-03-2017 NA29_RS09360 140726b9bd64c06f358947166b5178e4 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 3.0E-21 T 09-03-2017 NA29_RS08525 11f1970ae33d2779d193233a76f9c02b 233 SUPERFAMILY SSF56925 33 233 3.66E-23 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NA29_RS08525 11f1970ae33d2779d193233a76f9c02b 233 Pfam PF13505 Outer membrane protein beta-barrel domain 16 209 4.0E-19 T 09-03-2017 IPR027385 Outer membrane protein beta-barrel NA29_RS08525 11f1970ae33d2779d193233a76f9c02b 233 Gene3D G3DSA:2.40.160.20 32 233 3.1E-26 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NA29_RS09350 b74e7626bf6b3629e752b114f7e36a68 172 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 9 172 1.3E-64 T 09-03-2017 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 NA29_RS09350 b74e7626bf6b3629e752b114f7e36a68 172 SUPERFAMILY SSF55200 84 172 2.88E-34 T 09-03-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 NA29_RS09350 b74e7626bf6b3629e752b114f7e36a68 172 Gene3D G3DSA:3.30.110.10 81 172 3.5E-41 T 09-03-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 NA29_RS09350 b74e7626bf6b3629e752b114f7e36a68 172 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 9 77 1.1E-26 T 09-03-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 NA29_RS09350 b74e7626bf6b3629e752b114f7e36a68 172 Gene3D G3DSA:3.10.20.80 5 79 8.3E-32 T 09-03-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 NA29_RS09350 b74e7626bf6b3629e752b114f7e36a68 172 SUPERFAMILY SSF54364 7 79 5.49E-26 T 09-03-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 NA29_RS09350 b74e7626bf6b3629e752b114f7e36a68 172 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 172 29.674 T 09-03-2017 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 NA29_RS09350 b74e7626bf6b3629e752b114f7e36a68 172 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 85 170 1.2E-38 T 09-03-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 NA29_RS00650 f54421f786b53ae707e270dc8685fda8 628 SUPERFAMILY SSF53795 259 627 2.52E-157 T 09-03-2017 NA29_RS00650 f54421f786b53ae707e270dc8685fda8 628 Gene3D G3DSA:3.40.449.10 28 258 3.8E-101 T 09-03-2017 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 NA29_RS00650 f54421f786b53ae707e270dc8685fda8 628 SUPERFAMILY SSF68923 27 258 2.88E-102 T 09-03-2017 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 NA29_RS00650 f54421f786b53ae707e270dc8685fda8 628 Pfam PF00821 Phosphoenolpyruvate carboxykinase 35 626 6.6E-284 T 09-03-2017 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 NA29_RS00650 f54421f786b53ae707e270dc8685fda8 628 Gene3D G3DSA:3.90.228.20 354 627 1.0E-95 T 09-03-2017 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 NA29_RS00650 f54421f786b53ae707e270dc8685fda8 628 Gene3D G3DSA:3.90.228.20 259 330 4.5E-32 T 09-03-2017 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 NA29_RS00650 f54421f786b53ae707e270dc8685fda8 628 PIRSF PIRSF001348 13 628 2.9E-283 T 09-03-2017 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 NA29_RS00650 f54421f786b53ae707e270dc8685fda8 628 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 24 627 51.321 T 09-03-2017 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 NA29_RS00650 f54421f786b53ae707e270dc8685fda8 628 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 283 291 - T 09-03-2017 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 NA29_RS00510 f2a42d1643aea034d68ee3f3b5ff6264 321 SMART SM00267 141 317 6.8E-65 T 09-03-2017 IPR000160 GGDEF domain NA29_RS00510 f2a42d1643aea034d68ee3f3b5ff6264 321 Pfam PF00990 Diguanylate cyclase, GGDEF domain 153 313 3.5E-51 T 09-03-2017 IPR000160 GGDEF domain NA29_RS00510 f2a42d1643aea034d68ee3f3b5ff6264 321 SUPERFAMILY SSF55073 157 316 1.18E-49 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS00510 f2a42d1643aea034d68ee3f3b5ff6264 321 Gene3D G3DSA:3.30.70.270 154 316 8.8E-55 T 09-03-2017 NA29_RS00510 f2a42d1643aea034d68ee3f3b5ff6264 321 Gene3D G3DSA:3.40.50.2300 2 140 1.3E-30 T 09-03-2017 NA29_RS00510 f2a42d1643aea034d68ee3f3b5ff6264 321 SUPERFAMILY SSF52172 2 130 2.99E-30 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS00510 f2a42d1643aea034d68ee3f3b5ff6264 321 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 148 317 2.8E-53 T 09-03-2017 IPR000160 GGDEF domain NA29_RS00510 f2a42d1643aea034d68ee3f3b5ff6264 321 Pfam PF00072 Response regulator receiver domain 2 114 2.9E-20 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS00510 f2a42d1643aea034d68ee3f3b5ff6264 321 SMART SM00448 1 114 2.1E-22 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS23525 ddcc3b8b36bb0dd75bd629c5c62f630c 85 Gene3D G3DSA:3.30.750.24 2 83 4.0E-11 T 09-03-2017 IPR002645 STAS domain NA29_RS23525 ddcc3b8b36bb0dd75bd629c5c62f630c 85 SUPERFAMILY SSF52091 2 83 1.77E-13 T 09-03-2017 IPR002645 STAS domain NA29_RS23525 ddcc3b8b36bb0dd75bd629c5c62f630c 85 Pfam PF13466 STAS domain 2 80 1.2E-19 T 09-03-2017 IPR002645 STAS domain NA29_RS04265 05e98de4ebc62ef21329ab03d54a5008 367 Gene3D G3DSA:2.40.160.10 21 367 5.7E-90 T 09-03-2017 IPR023614 Porin domain NA29_RS04265 05e98de4ebc62ef21329ab03d54a5008 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 182 194 2.2E-8 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS04265 05e98de4ebc62ef21329ab03d54a5008 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 93 103 2.2E-8 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS04265 05e98de4ebc62ef21329ab03d54a5008 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 51 62 2.2E-8 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS04265 05e98de4ebc62ef21329ab03d54a5008 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 154 165 2.2E-8 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS04265 05e98de4ebc62ef21329ab03d54a5008 367 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 313 330 2.2E-8 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS04265 05e98de4ebc62ef21329ab03d54a5008 367 SUPERFAMILY SSF56935 21 367 2.93E-77 T 09-03-2017 NA29_RS04265 05e98de4ebc62ef21329ab03d54a5008 367 Pfam PF13609 Gram-negative porin 12 333 1.1E-37 T 09-03-2017 NA29_RS04265 05e98de4ebc62ef21329ab03d54a5008 367 PRINTS PR00184 Neisseria sp. porin signature 53 78 6.0E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS04265 05e98de4ebc62ef21329ab03d54a5008 367 PRINTS PR00184 Neisseria sp. porin signature 153 170 6.0E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS04265 05e98de4ebc62ef21329ab03d54a5008 367 PRINTS PR00184 Neisseria sp. porin signature 310 334 6.0E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS20370 1143bba897357c387f767fa8e2ad6129 404 TIGRFAM TIGR00109 hemH: ferrochelatase 13 339 1.5E-91 T 09-03-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 NA29_RS20370 1143bba897357c387f767fa8e2ad6129 404 Hamap MF_00323 Ferrochelatase [hemH]. 14 339 38.297 T 09-03-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 NA29_RS20370 1143bba897357c387f767fa8e2ad6129 404 Gene3D G3DSA:3.40.50.1400 219 340 4.6E-31 T 09-03-2017 NA29_RS20370 1143bba897357c387f767fa8e2ad6129 404 Pfam PF00762 Ferrochelatase 15 338 1.7E-110 T 09-03-2017 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 NA29_RS20370 1143bba897357c387f767fa8e2ad6129 404 Gene3D G3DSA:3.40.50.1400 14 218 2.8E-69 T 09-03-2017 NA29_RS20370 1143bba897357c387f767fa8e2ad6129 404 ProSitePatterns PS00534 Ferrochelatase signature. 208 226 - T 09-03-2017 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 NA29_RS20370 1143bba897357c387f767fa8e2ad6129 404 SUPERFAMILY SSF53800 13 347 3.92E-106 T 09-03-2017 NA29_RS08635 b5d87f4ca1372631b9037c89c1cbd542 205 SUPERFAMILY SSF55729 11 184 1.67E-37 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS08635 b5d87f4ca1372631b9037c89c1cbd542 205 Gene3D G3DSA:3.40.630.30 6 200 1.9E-59 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS08635 b5d87f4ca1372631b9037c89c1cbd542 205 Pfam PF13302 Acetyltransferase (GNAT) domain 21 158 1.3E-17 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS22460 b2714588239c3fc00acebf4efa6b3659 508 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 13 497 1.2E-113 T 09-03-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS22460 b2714588239c3fc00acebf4efa6b3659 508 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 12 500 32.631 T 09-03-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS22460 b2714588239c3fc00acebf4efa6b3659 508 Gene3D G3DSA:3.40.50.720 12 112 2.5E-14 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22460 b2714588239c3fc00acebf4efa6b3659 508 Gene3D G3DSA:3.90.190.20 363 497 1.7E-47 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS22460 b2714588239c3fc00acebf4efa6b3659 508 Pfam PF08245 Mur ligase middle domain 138 342 6.1E-30 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS22460 b2714588239c3fc00acebf4efa6b3659 508 SUPERFAMILY SSF53244 361 499 1.76E-42 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS22460 b2714588239c3fc00acebf4efa6b3659 508 SUPERFAMILY SSF51984 12 113 1.69E-9 T 09-03-2017 NA29_RS22460 b2714588239c3fc00acebf4efa6b3659 508 Pfam PF02875 Mur ligase family, glutamate ligase domain 363 430 7.1E-7 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS22460 b2714588239c3fc00acebf4efa6b3659 508 Gene3D G3DSA:3.40.1190.10 113 361 1.8E-73 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS22460 b2714588239c3fc00acebf4efa6b3659 508 SUPERFAMILY SSF53623 133 272 4.97E-49 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS22460 b2714588239c3fc00acebf4efa6b3659 508 SUPERFAMILY SSF53623 302 359 4.97E-49 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS13680 e10241de4d104b702bcea9125f3d1914 370 SUPERFAMILY SSF52096 263 339 4.56E-60 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS13680 e10241de4d104b702bcea9125f3d1914 370 SUPERFAMILY SSF52096 1 191 4.56E-60 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS13680 e10241de4d104b702bcea9125f3d1914 370 Pfam PF16113 Enoyl-CoA hydratase/isomerase 13 354 1.4E-112 T 09-03-2017 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 NA29_RS13680 e10241de4d104b702bcea9125f3d1914 370 Gene3D G3DSA:3.90.226.10 3 197 4.5E-56 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS14215 cddf5a717280b995bb23eaafddd3c5a8 294 SUPERFAMILY SSF103481 40 134 2.09E-9 T 09-03-2017 NA29_RS14215 cddf5a717280b995bb23eaafddd3c5a8 294 Pfam PF00892 EamA-like transporter family 8 131 1.3E-13 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS14215 cddf5a717280b995bb23eaafddd3c5a8 294 Pfam PF00892 EamA-like transporter family 142 280 8.4E-18 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS14215 cddf5a717280b995bb23eaafddd3c5a8 294 SUPERFAMILY SSF103481 202 282 1.44E-12 T 09-03-2017 NA29_RS21105 0a378ff826174f51080650d50f879023 416 SUPERFAMILY SSF54862 20 118 7.11E-20 T 09-03-2017 NA29_RS21105 0a378ff826174f51080650d50f879023 416 PIRSF PIRSF000139 6 416 1.1E-113 T 09-03-2017 IPR012257 Glycolate oxidase, iron-sulphur subunit NA29_RS21105 0a378ff826174f51080650d50f879023 416 Gene3D G3DSA:1.10.1060.10 9 105 3.2E-22 T 09-03-2017 NA29_RS21105 0a378ff826174f51080650d50f879023 416 Pfam PF13183 4Fe-4S dicluster domain 22 89 6.3E-12 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NA29_RS21105 0a378ff826174f51080650d50f879023 416 Pfam PF02754 Cysteine-rich domain 171 255 7.3E-13 T 09-03-2017 IPR004017 Cysteine-rich domain NA29_RS21105 0a378ff826174f51080650d50f879023 416 Pfam PF02754 Cysteine-rich domain 304 387 6.7E-11 T 09-03-2017 IPR004017 Cysteine-rich domain NA29_RS21105 0a378ff826174f51080650d50f879023 416 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS21105 0a378ff826174f51080650d50f879023 416 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS05300 623d52ee4356d14f4435d3df102fa6f1 355 SUPERFAMILY SSF53474 70 351 3.98E-61 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS05300 623d52ee4356d14f4435d3df102fa6f1 355 PRINTS PR00412 Epoxide hydrolase signature 158 171 3.2E-7 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS05300 623d52ee4356d14f4435d3df102fa6f1 355 PRINTS PR00412 Epoxide hydrolase signature 93 111 3.2E-7 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS05300 623d52ee4356d14f4435d3df102fa6f1 355 PRINTS PR00412 Epoxide hydrolase signature 172 185 3.2E-7 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS05300 623d52ee4356d14f4435d3df102fa6f1 355 PRINTS PR00412 Epoxide hydrolase signature 279 295 3.2E-7 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS05300 623d52ee4356d14f4435d3df102fa6f1 355 PRINTS PR00412 Epoxide hydrolase signature 113 128 3.2E-7 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS05300 623d52ee4356d14f4435d3df102fa6f1 355 Gene3D G3DSA:3.40.50.1820 51 349 4.2E-80 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS05300 623d52ee4356d14f4435d3df102fa6f1 355 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 128 6.9E-11 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS05300 623d52ee4356d14f4435d3df102fa6f1 355 PRINTS PR00111 Alpha/beta hydrolase fold signature 158 171 6.9E-11 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS05300 623d52ee4356d14f4435d3df102fa6f1 355 PRINTS PR00111 Alpha/beta hydrolase fold signature 172 185 6.9E-11 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS05300 623d52ee4356d14f4435d3df102fa6f1 355 Pfam PF00561 alpha/beta hydrolase fold 88 339 1.2E-22 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS01940 89e8557720cafc000b26510714b6b1ee 278 Pfam PF12697 Alpha/beta hydrolase family 32 269 1.5E-17 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS01940 89e8557720cafc000b26510714b6b1ee 278 SUPERFAMILY SSF53474 5 276 1.5E-44 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS01940 89e8557720cafc000b26510714b6b1ee 278 Gene3D G3DSA:3.40.50.1820 6 276 9.8E-45 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS21375 3710ea1c95c3f68b5e481615108f3293 499 Pfam PF00171 Aldehyde dehydrogenase family 18 478 1.1E-139 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS21375 3710ea1c95c3f68b5e481615108f3293 499 Gene3D G3DSA:3.40.309.10 263 443 1.3E-65 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS21375 3710ea1c95c3f68b5e481615108f3293 499 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 8 482 3.1E-216 T 09-03-2017 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 NA29_RS21375 3710ea1c95c3f68b5e481615108f3293 499 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS21375 3710ea1c95c3f68b5e481615108f3293 499 SUPERFAMILY SSF53720 3 482 9.42E-148 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS21375 3710ea1c95c3f68b5e481615108f3293 499 Gene3D G3DSA:3.40.605.10 5 262 1.2E-98 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS09285 fd1b066c8e46bc8e01cc75690256a12a 556 SUPERFAMILY SSF54862 456 556 8.58E-29 T 09-03-2017 NA29_RS09285 fd1b066c8e46bc8e01cc75690256a12a 556 SUPERFAMILY SSF54373 220 314 4.71E-39 T 09-03-2017 NA29_RS09285 fd1b066c8e46bc8e01cc75690256a12a 556 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 452 553 2.6E-51 T 09-03-2017 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 Reactome: R-HSA-611105 NA29_RS09285 fd1b066c8e46bc8e01cc75690256a12a 556 Gene3D G3DSA:3.50.50.60 15 290 9.7E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS09285 fd1b066c8e46bc8e01cc75690256a12a 556 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 18 40 1.6E-6 T 09-03-2017 NA29_RS09285 fd1b066c8e46bc8e01cc75690256a12a 556 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 187 202 1.6E-6 T 09-03-2017 NA29_RS09285 fd1b066c8e46bc8e01cc75690256a12a 556 SUPERFAMILY SSF51905 12 218 9.86E-60 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS09285 fd1b066c8e46bc8e01cc75690256a12a 556 SUPERFAMILY SSF51905 315 454 9.86E-60 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS09285 fd1b066c8e46bc8e01cc75690256a12a 556 Pfam PF13450 NAD(P)-binding Rossmann-like domain 21 66 1.3E-7 T 09-03-2017 NA29_RS09285 fd1b066c8e46bc8e01cc75690256a12a 556 Gene3D G3DSA:3.30.70.20 499 540 7.0E-4 T 09-03-2017 NA29_RS24465 015a797dfe4eabd344920c29ffceae13 216 Gene3D G3DSA:1.10.760.10 92 207 6.2E-16 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24465 015a797dfe4eabd344920c29ffceae13 216 PIRSF PIRSF024608 4 216 3.7E-70 T 09-03-2017 IPR016823 Sulfur oxidation c-type cytochrome SoxX, type II NA29_RS24465 015a797dfe4eabd344920c29ffceae13 216 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 130 209 1.8E-26 T 09-03-2017 IPR030999 Sulfur oxidation c-type cytochrome SoxX NA29_RS24465 015a797dfe4eabd344920c29ffceae13 216 SUPERFAMILY SSF46626 101 207 1.23E-14 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24465 015a797dfe4eabd344920c29ffceae13 216 SUPERFAMILY SSF46626 11 25 1.23E-14 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS20875 678f11f11bb574b4daf1f2f32b5bbb1a 158 SUPERFAMILY SSF56214 17 142 1.27E-25 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 NA29_RS20875 678f11f11bb574b4daf1f2f32b5bbb1a 158 Gene3D G3DSA:3.90.470.20 17 143 4.3E-31 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 NA29_RS20875 678f11f11bb574b4daf1f2f32b5bbb1a 158 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 19 139 2.5E-17 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 NA29_RS20875 678f11f11bb574b4daf1f2f32b5bbb1a 158 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 23 118 1.0E-36 T 09-03-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NA29_RS20875 678f11f11bb574b4daf1f2f32b5bbb1a 158 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 18 144 24.341 T 09-03-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NA29_RS20875 678f11f11bb574b4daf1f2f32b5bbb1a 158 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 17 144 1.3E-27 T 09-03-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NA29_RS20875 678f11f11bb574b4daf1f2f32b5bbb1a 158 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 17 143 4.2E-19 T 09-03-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 NA29_RS06660 2e83b54db696f31b0ddcf556eec645ca 337 Gene3D G3DSA:3.40.190.10 267 324 3.2E-32 T 09-03-2017 NA29_RS06660 2e83b54db696f31b0ddcf556eec645ca 337 Gene3D G3DSA:3.40.190.10 1 123 3.2E-32 T 09-03-2017 NA29_RS06660 2e83b54db696f31b0ddcf556eec645ca 337 Gene3D G3DSA:3.40.190.10 128 266 7.0E-39 T 09-03-2017 NA29_RS06660 2e83b54db696f31b0ddcf556eec645ca 337 Pfam PF13343 Bacterial extracellular solute-binding protein 77 314 1.7E-49 T 09-03-2017 NA29_RS06660 2e83b54db696f31b0ddcf556eec645ca 337 SUPERFAMILY SSF53850 37 328 1.54E-62 T 09-03-2017 NA29_RS06285 b9d26804cfd0b0e1b588e0c6584ac8e3 309 SUPERFAMILY SSF52540 3 231 7.07E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06285 b9d26804cfd0b0e1b588e0c6584ac8e3 309 Pfam PF00005 ABC transporter 21 163 1.1E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS06285 b9d26804cfd0b0e1b588e0c6584ac8e3 309 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS06285 b9d26804cfd0b0e1b588e0c6584ac8e3 309 SMART SM00382 30 213 3.4E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS06285 b9d26804cfd0b0e1b588e0c6584ac8e3 309 Gene3D G3DSA:3.40.50.300 3 230 2.1E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03085 5f7201b1d9aac163c26e210c5b2396c3 233 SUPERFAMILY SSF88713 22 207 2.27E-35 T 09-03-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NA29_RS03085 5f7201b1d9aac163c26e210c5b2396c3 233 Pfam PF01522 Polysaccharide deacetylase 60 194 1.9E-24 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 NA29_RS03085 5f7201b1d9aac163c26e210c5b2396c3 233 Gene3D G3DSA:3.20.20.370 56 197 4.5E-25 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 NA29_RS04555 b196b9399fd6af40025a88320a625405 390 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 23 390 40.101 T 09-03-2017 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 NA29_RS04555 b196b9399fd6af40025a88320a625405 390 Gene3D G3DSA:3.30.420.40 164 349 2.8E-69 T 09-03-2017 NA29_RS04555 b196b9399fd6af40025a88320a625405 390 SUPERFAMILY SSF53067 83 128 3.37E-26 T 09-03-2017 NA29_RS04555 b196b9399fd6af40025a88320a625405 390 SUPERFAMILY SSF53067 162 361 3.37E-26 T 09-03-2017 NA29_RS04555 b196b9399fd6af40025a88320a625405 390 SUPERFAMILY SSF53067 25 56 3.37E-26 T 09-03-2017 NA29_RS04555 b196b9399fd6af40025a88320a625405 390 Pfam PF03702 Uncharacterised protein family (UPF0075) 24 389 1.9E-134 T 09-03-2017 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 NA29_RS09690 21e0ea4b9d8369817804214611a6339b 562 Gene3D G3DSA:3.30.300.30 443 544 5.4E-22 T 09-03-2017 NA29_RS09690 21e0ea4b9d8369817804214611a6339b 562 Gene3D G3DSA:2.30.38.10 363 438 4.0E-18 T 09-03-2017 NA29_RS09690 21e0ea4b9d8369817804214611a6339b 562 Gene3D G3DSA:3.40.50.980 50 205 8.5E-29 T 09-03-2017 NA29_RS09690 21e0ea4b9d8369817804214611a6339b 562 Pfam PF00501 AMP-binding enzyme 48 444 3.8E-73 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS09690 21e0ea4b9d8369817804214611a6339b 562 Gene3D G3DSA:3.40.50.980 206 351 1.9E-28 T 09-03-2017 NA29_RS09690 21e0ea4b9d8369817804214611a6339b 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 530 3.8E-17 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS09690 21e0ea4b9d8369817804214611a6339b 562 SUPERFAMILY SSF56801 20 543 5.89E-130 T 09-03-2017 NA29_RS09690 21e0ea4b9d8369817804214611a6339b 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 199 210 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS24925 3f8547fe31838d3f306cf36f85c2337c 146 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 09-03-2017 IPR019776 Flagellar basal body rod protein, conserved site NA29_RS24925 3f8547fe31838d3f306cf36f85c2337c 146 PIRSF PIRSF002889 1 145 2.4E-40 T 09-03-2017 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 NA29_RS24925 3f8547fe31838d3f306cf36f85c2337c 146 Pfam PF00460 Flagella basal body rod protein 9 39 9.6E-11 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 NA29_RS24925 3f8547fe31838d3f306cf36f85c2337c 146 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 142 3.0E-36 T 09-03-2017 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 SUPERFAMILY SSF52540 359 466 4.35E-25 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 SMART SM00487 602 792 8.3E-34 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 SMART SM01058 481 578 7.5E-50 T 09-03-2017 IPR003711 CarD-like/TRCF domain NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 157 1083 0.0 T 09-03-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 Pfam PF02559 CarD-like/TRCF domain 482 577 1.6E-27 T 09-03-2017 IPR003711 CarD-like/TRCF domain NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 SUPERFAMILY SSF52540 525 785 3.6E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 Pfam PF00271 Helicase conserved C-terminal domain 808 911 1.3E-15 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 SMART SM00982 1010 1110 5.8E-46 T 09-03-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 SUPERFAMILY SSF52540 785 992 7.18E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 Pfam PF00270 DEAD/DEAH box helicase 607 763 1.0E-17 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 Gene3D G3DSA:3.40.50.300 589 788 1.9E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 SUPERFAMILY SSF52540 17 348 3.87E-92 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 Gene3D G3DSA:3.30.2060.10 141 213 5.2E-12 T 09-03-2017 NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 SUPERFAMILY SSF143517 996 1146 5.75E-40 T 09-03-2017 NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 Gene3D G3DSA:3.40.50.300 800 958 7.3E-35 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 45 1112 28.076 T 09-03-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 SMART SM00490 825 912 9.8E-15 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 SUPERFAMILY SSF141259 473 550 1.83E-23 T 09-03-2017 IPR003711 CarD-like/TRCF domain NA29_RS10030 8d9a0b55a68835c892d757394bf4f955 1154 Pfam PF03461 TRCF domain 1011 1103 2.0E-26 T 09-03-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 NA29_RS08715 14539b5ffedbcbe6e307676690ef48b4 321 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 25 240 3.1E-50 T 09-03-2017 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS08715 14539b5ffedbcbe6e307676690ef48b4 321 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 22 120 6.1E-24 T 09-03-2017 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS08715 14539b5ffedbcbe6e307676690ef48b4 321 SUPERFAMILY SSF54292 18 117 2.1E-19 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS08715 14539b5ffedbcbe6e307676690ef48b4 321 SUPERFAMILY SSF46548 147 235 5.06E-16 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 NA29_RS08715 14539b5ffedbcbe6e307676690ef48b4 321 Gene3D G3DSA:1.10.1060.10 122 241 2.4E-21 T 09-03-2017 NA29_RS08715 14539b5ffedbcbe6e307676690ef48b4 321 Pfam PF13183 4Fe-4S dicluster domain 157 229 3.8E-8 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NA29_RS08715 14539b5ffedbcbe6e307676690ef48b4 321 Gene3D G3DSA:3.10.20.30 16 117 4.8E-26 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS08715 14539b5ffedbcbe6e307676690ef48b4 321 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 159 170 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS08715 14539b5ffedbcbe6e307676690ef48b4 321 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 215 226 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS21295 b84b30573e8746c83860c2b463f10a37 368 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 367 1.3E-189 T 09-03-2017 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|Reactome: R-HSA-71384 NA29_RS21295 b84b30573e8746c83860c2b463f10a37 368 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 09-03-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 NA29_RS21295 b84b30573e8746c83860c2b463f10a37 368 SUPERFAMILY SSF50129 1 185 3.2E-70 T 09-03-2017 IPR011032 GroES-like NA29_RS21295 b84b30573e8746c83860c2b463f10a37 368 SUPERFAMILY SSF50129 318 368 1.37E-12 T 09-03-2017 IPR011032 GroES-like NA29_RS21295 b84b30573e8746c83860c2b463f10a37 368 Gene3D G3DSA:3.90.180.10 1 189 1.7E-64 T 09-03-2017 IPR011032 GroES-like NA29_RS21295 b84b30573e8746c83860c2b463f10a37 368 Pfam PF00107 Zinc-binding dehydrogenase 197 319 1.3E-25 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NA29_RS21295 b84b30573e8746c83860c2b463f10a37 368 Gene3D G3DSA:3.40.50.720 190 306 4.5E-41 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS21295 b84b30573e8746c83860c2b463f10a37 368 SUPERFAMILY SSF51735 160 333 2.87E-46 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS21295 b84b30573e8746c83860c2b463f10a37 368 SMART SM00829 12 366 0.0016 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NA29_RS21295 b84b30573e8746c83860c2b463f10a37 368 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 1.3E-23 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NA29_RS25200 ef9013e2cfb613c2fc4c6a7f87c35960 502 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS25200 ef9013e2cfb613c2fc4c6a7f87c35960 502 Pfam PF00171 Aldehyde dehydrogenase family 21 482 1.8E-143 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS25200 ef9013e2cfb613c2fc4c6a7f87c35960 502 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 9 486 4.5E-216 T 09-03-2017 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 NA29_RS25200 ef9013e2cfb613c2fc4c6a7f87c35960 502 Gene3D G3DSA:3.40.309.10 266 447 3.6E-65 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS25200 ef9013e2cfb613c2fc4c6a7f87c35960 502 SUPERFAMILY SSF53720 6 487 4.06E-153 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS25200 ef9013e2cfb613c2fc4c6a7f87c35960 502 Gene3D G3DSA:3.40.605.10 8 265 8.7E-95 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS03045 22d89495036473591f6afbf549086bce 623 Gene3D G3DSA:3.40.50.300 44 69 2.4E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03045 22d89495036473591f6afbf549086bce 623 Gene3D G3DSA:3.40.50.300 110 149 2.4E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03045 22d89495036473591f6afbf549086bce 623 Gene3D G3DSA:3.40.50.300 222 260 2.4E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03045 22d89495036473591f6afbf549086bce 623 SUPERFAMILY SSF52540 42 181 1.7E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03045 22d89495036473591f6afbf549086bce 623 SUPERFAMILY SSF52540 42 103 7.97E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03045 22d89495036473591f6afbf549086bce 623 SUPERFAMILY SSF52540 177 260 7.97E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23800 8ef36dc8415e614279b764f7c4546fd1 131 Pfam PF00410 Ribosomal protein S8 5 130 7.7E-52 T 09-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23800 8ef36dc8415e614279b764f7c4546fd1 131 SUPERFAMILY SSF56047 2 130 2.75E-48 T 09-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23800 8ef36dc8415e614279b764f7c4546fd1 131 Gene3D G3DSA:3.30.1490.10 75 130 2.9E-28 T 09-03-2017 NA29_RS23800 8ef36dc8415e614279b764f7c4546fd1 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 09-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23800 8ef36dc8415e614279b764f7c4546fd1 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 32.999 T 09-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23800 8ef36dc8415e614279b764f7c4546fd1 131 Gene3D G3DSA:3.30.1370.30 2 72 3.4E-30 T 09-03-2017 NA29_RS25180 831e8bb0a801fa655ea54ba3c2eeb427 397 Gene3D G3DSA:3.40.50.2300 155 301 8.2E-21 T 09-03-2017 NA29_RS25180 831e8bb0a801fa655ea54ba3c2eeb427 397 Gene3D G3DSA:3.40.50.2300 23 147 3.2E-34 T 09-03-2017 NA29_RS25180 831e8bb0a801fa655ea54ba3c2eeb427 397 Gene3D G3DSA:3.40.50.2300 302 350 3.2E-34 T 09-03-2017 NA29_RS25180 831e8bb0a801fa655ea54ba3c2eeb427 397 Pfam PF13458 Periplasmic binding protein 27 364 4.5E-93 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS25180 831e8bb0a801fa655ea54ba3c2eeb427 397 SUPERFAMILY SSF53822 27 395 7.07E-95 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS00285 968dd9388fbbca5e6325a7dbee7e8b49 283 Gene3D G3DSA:3.40.50.1820 31 277 1.4E-43 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS00285 968dd9388fbbca5e6325a7dbee7e8b49 283 SUPERFAMILY SSF53474 32 242 8.73E-32 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS00285 968dd9388fbbca5e6325a7dbee7e8b49 283 Pfam PF01738 Dienelactone hydrolase family 34 279 6.6E-17 T 09-03-2017 IPR002925 Dienelactone hydrolase GO:0016787 NA29_RS21115 25b3357e47fc770344dbd0252d13878f 278 PIRSF PIRSF006157 1 265 1.6E-85 T 09-03-2017 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 NA29_RS21115 25b3357e47fc770344dbd0252d13878f 278 SUPERFAMILY SSF53213 4 264 3.4E-86 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS21115 25b3357e47fc770344dbd0252d13878f 278 Gene3D G3DSA:3.40.830.10 1 264 4.3E-94 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS21115 25b3357e47fc770344dbd0252d13878f 278 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 263 2.0E-47 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS04810 e50ecfb1ced6db6cda3a7a017f44fc38 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 7.7E-19 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS04810 e50ecfb1ced6db6cda3a7a017f44fc38 208 Gene3D G3DSA:3.40.30.10 1 89 1.4E-27 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS04810 e50ecfb1ced6db6cda3a7a017f44fc38 208 Pfam PF13410 Glutathione S-transferase, C-terminal domain 122 189 1.2E-13 T 09-03-2017 NA29_RS04810 e50ecfb1ced6db6cda3a7a017f44fc38 208 SUPERFAMILY SSF52833 1 100 8.53E-23 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS04810 e50ecfb1ced6db6cda3a7a017f44fc38 208 Gene3D G3DSA:1.20.1050.10 90 201 1.4E-24 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS04810 e50ecfb1ced6db6cda3a7a017f44fc38 208 SUPERFAMILY SSF47616 69 201 6.96E-29 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS12520 c825f2ae8c5e4790785eb2ef7f51c56c 571 Gene3D G3DSA:2.30.30.60 383 431 2.4E-9 T 09-03-2017 NA29_RS12520 c825f2ae8c5e4790785eb2ef7f51c56c 571 SUPERFAMILY SSF50182 367 432 9.48E-11 T 09-03-2017 IPR010920 LSM domain NA29_RS12520 c825f2ae8c5e4790785eb2ef7f51c56c 571 Gene3D G3DSA:3.30.70.100 442 522 1.6E-9 T 09-03-2017 NA29_RS12520 c825f2ae8c5e4790785eb2ef7f51c56c 571 Pfam PF00924 Mechanosensitive ion channel 327 525 1.3E-29 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 NA29_RS12520 c825f2ae8c5e4790785eb2ef7f51c56c 571 SUPERFAMILY SSF82689 442 531 5.23E-14 T 09-03-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 NA29_RS08910 0b90a732359b8d89883bdb2a632372f4 806 Pfam PF13291 ACT domain 703 780 3.1E-15 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 NA29_RS08910 0b90a732359b8d89883bdb2a632372f4 806 Gene3D G3DSA:3.10.20.30 451 511 1.2E-19 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS08910 0b90a732359b8d89883bdb2a632372f4 806 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 89 779 3.3E-220 T 09-03-2017 IPR004811 RelA/SpoT family GO:0015969 NA29_RS08910 0b90a732359b8d89883bdb2a632372f4 806 Pfam PF13328 HD domain 89 238 1.6E-52 T 09-03-2017 IPR003607 HD/PDEase domain NA29_RS08910 0b90a732359b8d89883bdb2a632372f4 806 Pfam PF04607 Region found in RelA / SpoT proteins 298 407 2.7E-33 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 NA29_RS08910 0b90a732359b8d89883bdb2a632372f4 806 SMART SM00954 298 408 2.4E-62 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 NA29_RS08910 0b90a732359b8d89883bdb2a632372f4 806 SUPERFAMILY SSF109604 72 253 9.73E-71 T 09-03-2017 NA29_RS08910 0b90a732359b8d89883bdb2a632372f4 806 SUPERFAMILY SSF81301 244 455 2.13E-60 T 09-03-2017 NA29_RS08910 0b90a732359b8d89883bdb2a632372f4 806 SUPERFAMILY SSF81271 438 510 2.83E-21 T 09-03-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 NA29_RS08910 0b90a732359b8d89883bdb2a632372f4 806 Gene3D G3DSA:3.30.460.10 255 388 3.6E-43 T 09-03-2017 NA29_RS08910 0b90a732359b8d89883bdb2a632372f4 806 SMART SM00471 104 216 1.9E-9 T 09-03-2017 IPR003607 HD/PDEase domain NA29_RS08910 0b90a732359b8d89883bdb2a632372f4 806 Pfam PF02824 TGS domain 451 510 2.9E-18 T 09-03-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 NA29_RS08910 0b90a732359b8d89883bdb2a632372f4 806 Gene3D G3DSA:3.30.70.260 705 778 9.5E-5 T 09-03-2017 NA29_RS09335 8ff87efaf619924b81bdb64f3ac77ce2 756 Gene3D G3DSA:3.30.460.10 200 346 4.1E-52 T 09-03-2017 NA29_RS09335 8ff87efaf619924b81bdb64f3ac77ce2 756 SUPERFAMILY SSF81271 418 482 1.98E-19 T 09-03-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 NA29_RS09335 8ff87efaf619924b81bdb64f3ac77ce2 756 Pfam PF13291 ACT domain 681 754 7.1E-17 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 NA29_RS09335 8ff87efaf619924b81bdb64f3ac77ce2 756 SUPERFAMILY SSF109604 25 212 1.91E-45 T 09-03-2017 NA29_RS09335 8ff87efaf619924b81bdb64f3ac77ce2 756 SUPERFAMILY SSF81301 214 394 4.58E-62 T 09-03-2017 NA29_RS09335 8ff87efaf619924b81bdb64f3ac77ce2 756 Pfam PF13328 HD domain 30 198 1.9E-46 T 09-03-2017 IPR003607 HD/PDEase domain NA29_RS09335 8ff87efaf619924b81bdb64f3ac77ce2 756 SMART SM00954 257 367 9.9E-67 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 NA29_RS09335 8ff87efaf619924b81bdb64f3ac77ce2 756 Pfam PF02824 TGS domain 423 482 1.2E-21 T 09-03-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 NA29_RS09335 8ff87efaf619924b81bdb64f3ac77ce2 756 Gene3D G3DSA:3.30.70.260 682 752 3.5E-17 T 09-03-2017 NA29_RS09335 8ff87efaf619924b81bdb64f3ac77ce2 756 Gene3D G3DSA:3.10.20.30 423 484 1.2E-22 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS09335 8ff87efaf619924b81bdb64f3ac77ce2 756 SUPERFAMILY SSF55021 681 751 1.18E-13 T 09-03-2017 NA29_RS09335 8ff87efaf619924b81bdb64f3ac77ce2 756 Pfam PF04607 Region found in RelA / SpoT proteins 257 367 1.2E-38 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 NA29_RS09335 8ff87efaf619924b81bdb64f3ac77ce2 756 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 30 753 1.4E-181 T 09-03-2017 IPR004811 RelA/SpoT family GO:0015969 NA29_RS06625 11a456efc311764c2fb5200be0d9442e 331 Pfam PF04909 Amidohydrolase 4 331 8.6E-46 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS06625 11a456efc311764c2fb5200be0d9442e 331 Gene3D G3DSA:3.20.20.140 3 331 7.5E-81 T 09-03-2017 NA29_RS06625 11a456efc311764c2fb5200be0d9442e 331 SUPERFAMILY SSF51556 2 331 4.68E-78 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS07375 a70aadef94f2e279c1e2930c18fe85eb 85 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 4 54 2.6E-10 T 09-03-2017 IPR022789 Antitoxin ParD NA29_RS07375 a70aadef94f2e279c1e2930c18fe85eb 85 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 1 70 2.0E-21 T 09-03-2017 IPR022789 Antitoxin ParD NA29_RS07375 a70aadef94f2e279c1e2930c18fe85eb 85 SUPERFAMILY SSF47598 2 42 1.22E-7 T 09-03-2017 IPR010985 Ribbon-helix-helix GO:0006355 NA29_RS08785 9e241aa50e86e95c31dd1dbe3bb8c4b6 155 SMART SM00347 28 128 8.9E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS08785 9e241aa50e86e95c31dd1dbe3bb8c4b6 155 Pfam PF13463 Winged helix DNA-binding domain 40 101 8.7E-8 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS08785 9e241aa50e86e95c31dd1dbe3bb8c4b6 155 SUPERFAMILY SSF46785 5 143 3.25E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08785 9e241aa50e86e95c31dd1dbe3bb8c4b6 155 Gene3D G3DSA:1.10.10.10 5 144 3.3E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17775 fc441f6595348e65426909b9f67eb39f 300 TIGRFAM TIGR01138 cysM: cysteine synthase B 5 298 1.1E-134 T 09-03-2017 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 NA29_RS17775 fc441f6595348e65426909b9f67eb39f 300 Gene3D G3DSA:3.40.50.1100 46 146 2.9E-37 T 09-03-2017 NA29_RS17775 fc441f6595348e65426909b9f67eb39f 300 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 287 2.8E-62 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS17775 fc441f6595348e65426909b9f67eb39f 300 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 36 54 - T 09-03-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 NA29_RS17775 fc441f6595348e65426909b9f67eb39f 300 SUPERFAMILY SSF53686 2 298 6.16E-88 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS17775 fc441f6595348e65426909b9f67eb39f 300 Gene3D G3DSA:3.40.50.1100 152 299 5.8E-80 T 09-03-2017 NA29_RS17775 fc441f6595348e65426909b9f67eb39f 300 Gene3D G3DSA:3.40.50.1100 1 45 5.8E-80 T 09-03-2017 NA29_RS17775 fc441f6595348e65426909b9f67eb39f 300 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 298 2.5E-115 T 09-03-2017 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 NA29_RS13455 3c343e9fa3645a340d5d928833e9bf59 157 Gene3D G3DSA:1.10.490.10 18 125 1.5E-19 T 09-03-2017 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 NA29_RS13455 3c343e9fa3645a340d5d928833e9bf59 157 SUPERFAMILY SSF46458 18 131 1.06E-26 T 09-03-2017 IPR009050 Globin-like NA29_RS17140 a50cb7906f8b874f33458a45c13eb481 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 9.3E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS17140 a50cb7906f8b874f33458a45c13eb481 294 Pfam PF03466 LysR substrate binding domain 90 288 8.9E-36 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS17140 a50cb7906f8b874f33458a45c13eb481 294 SUPERFAMILY SSF53850 90 288 2.28E-33 T 09-03-2017 NA29_RS17140 a50cb7906f8b874f33458a45c13eb481 294 Gene3D G3DSA:3.40.190.10 91 193 9.6E-21 T 09-03-2017 NA29_RS17140 a50cb7906f8b874f33458a45c13eb481 294 Gene3D G3DSA:3.40.190.10 194 263 2.9E-15 T 09-03-2017 NA29_RS17140 a50cb7906f8b874f33458a45c13eb481 294 Gene3D G3DSA:1.10.10.10 4 90 1.4E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17140 a50cb7906f8b874f33458a45c13eb481 294 SUPERFAMILY SSF46785 4 113 1.44E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18725 bc74651d9d64e796be2a2afbf47fb18d 482 SUPERFAMILY SSF52540 74 359 5.94E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18725 bc74651d9d64e796be2a2afbf47fb18d 482 Gene3D G3DSA:3.40.50.300 1 211 4.4E-78 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18725 bc74651d9d64e796be2a2afbf47fb18d 482 Gene3D G3DSA:3.40.50.300 212 369 3.0E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18725 bc74651d9d64e796be2a2afbf47fb18d 482 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 09-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site NA29_RS18725 bc74651d9d64e796be2a2afbf47fb18d 482 SMART SM00487 20 222 8.2E-59 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain NA29_RS18725 bc74651d9d64e796be2a2afbf47fb18d 482 Pfam PF00270 DEAD/DEAH box helicase 25 194 5.4E-50 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NA29_RS18725 bc74651d9d64e796be2a2afbf47fb18d 482 SMART SM00490 258 339 4.9E-32 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS18725 bc74651d9d64e796be2a2afbf47fb18d 482 Pfam PF00271 Helicase conserved C-terminal domain 231 339 2.2E-25 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS13465 05c3d381b4251abbcfb6da5d4067f0fe 86 SUPERFAMILY SSF54285 1 84 5.23E-19 T 09-03-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp NA29_RS13465 05c3d381b4251abbcfb6da5d4067f0fe 86 Pfam PF02597 ThiS family 6 86 1.6E-16 T 09-03-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 NA29_RS13465 05c3d381b4251abbcfb6da5d4067f0fe 86 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 86 2.8E-22 T 09-03-2017 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 NA29_RS13465 05c3d381b4251abbcfb6da5d4067f0fe 86 Gene3D G3DSA:3.10.20.30 1 86 2.1E-22 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS13070 b05fe33becf9ebf8b064c5441c05f635 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.5E-30 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13070 b05fe33becf9ebf8b064c5441c05f635 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.5E-30 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13070 b05fe33becf9ebf8b064c5441c05f635 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.5E-30 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13070 b05fe33becf9ebf8b064c5441c05f635 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.5E-30 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13070 b05fe33becf9ebf8b064c5441c05f635 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.5E-30 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13070 b05fe33becf9ebf8b064c5441c05f635 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 214 1.5E-30 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13070 b05fe33becf9ebf8b064c5441c05f635 234 Gene3D G3DSA:3.40.50.720 4 231 1.4E-59 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13070 b05fe33becf9ebf8b064c5441c05f635 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 8.9E-6 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13070 b05fe33becf9ebf8b064c5441c05f635 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 8.9E-6 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13070 b05fe33becf9ebf8b064c5441c05f635 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 8.9E-6 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS13070 b05fe33becf9ebf8b064c5441c05f635 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 231 2.7E-47 T 09-03-2017 NA29_RS13070 b05fe33becf9ebf8b064c5441c05f635 234 SUPERFAMILY SSF51735 5 231 4.15E-62 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS00200 a459da24ba60e95181b8264706c30ffd 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 116 9.1E-25 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NA29_RS00200 a459da24ba60e95181b8264706c30ffd 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 223 2.5E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS00200 a459da24ba60e95181b8264706c30ffd 230 Gene3D G3DSA:1.10.3720.10 23 223 5.2E-43 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS00200 a459da24ba60e95181b8264706c30ffd 230 SUPERFAMILY SSF161098 21 208 1.44E-40 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS13170 b00908a73fad33e874c5f2673b54cd1d 265 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 1 264 72.818 T 09-03-2017 IPR026530 Phosphoenolpyruvate synthase regulatory protein NA29_RS13170 b00908a73fad33e874c5f2673b54cd1d 265 Pfam PF03618 Kinase/pyrophosphorylase 1 255 1.3E-80 T 09-03-2017 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 NA29_RS14910 a81493f25faaa76148f6261316d8c6a4 259 Pfam PF03883 Protein of unknown function (DUF328) 1 244 8.8E-90 T 09-03-2017 IPR005583 Peroxide stress protein YaaA NA29_RS14910 a81493f25faaa76148f6261316d8c6a4 259 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 257 35.722 T 09-03-2017 IPR005583 Peroxide stress protein YaaA NA29_RS06040 4cb8f8f42a2072bcf5e5db06edb4c835 327 Pfam PF01548 Transposase 4 151 8.7E-27 T 09-03-2017 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NA29_RS06040 4cb8f8f42a2072bcf5e5db06edb4c835 327 Pfam PF02371 Transposase IS116/IS110/IS902 family 201 284 3.0E-23 T 09-03-2017 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NA29_RS07195 173a3312741a36b54d9423acdfd5b2eb 394 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 228 1.1E-22 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NA29_RS07195 173a3312741a36b54d9423acdfd5b2eb 394 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 138 150 - T 09-03-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NA29_RS07195 173a3312741a36b54d9423acdfd5b2eb 394 SUPERFAMILY SSF47203 240 392 1.37E-48 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS07195 173a3312741a36b54d9423acdfd5b2eb 394 Gene3D G3DSA:1.10.540.10 20 133 1.7E-18 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS07195 173a3312741a36b54d9423acdfd5b2eb 394 Gene3D G3DSA:2.40.110.10 135 230 3.0E-34 T 09-03-2017 NA29_RS07195 173a3312741a36b54d9423acdfd5b2eb 394 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 22 132 2.9E-14 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS07195 173a3312741a36b54d9423acdfd5b2eb 394 Gene3D G3DSA:1.20.140.10 231 393 8.3E-56 T 09-03-2017 NA29_RS07195 173a3312741a36b54d9423acdfd5b2eb 394 SUPERFAMILY SSF56645 19 252 1.3E-63 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NA29_RS07195 173a3312741a36b54d9423acdfd5b2eb 394 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 241 390 2.9E-44 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS22770 b4cea77f8774566b91525b4f1a7cffa7 313 SUPERFAMILY SSF53448 1 225 1.45E-36 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS22770 b4cea77f8774566b91525b4f1a7cffa7 313 Pfam PF00535 Glycosyl transferase family 2 2 163 1.6E-29 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 NA29_RS22770 b4cea77f8774566b91525b4f1a7cffa7 313 Gene3D G3DSA:3.90.550.10 1 131 7.7E-23 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS09965 c36190074cfc90e896a942ba4ad9251a 309 SUPERFAMILY SSF53613 6 306 3.12E-83 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS09965 c36190074cfc90e896a942ba4ad9251a 309 Pfam PF00294 pfkB family carbohydrate kinase 8 299 1.5E-58 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB NA29_RS09965 c36190074cfc90e896a942ba4ad9251a 309 Gene3D G3DSA:3.40.1190.20 3 308 1.1E-88 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS14235 9bdedec2b0a08a95b62a262bca3876e9 254 SUPERFAMILY SSF55729 2 235 1.06E-82 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS14235 9bdedec2b0a08a95b62a262bca3876e9 254 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 35 223 3.2E-52 T 09-03-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 NA29_RS14235 9bdedec2b0a08a95b62a262bca3876e9 254 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 211 7.6E-69 T 09-03-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 NA29_RS14235 9bdedec2b0a08a95b62a262bca3876e9 254 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 254 92.622 T 09-03-2017 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 NA29_RS09960 47923af69599ea53cbc0c5006d00fdae 455 Pfam PF00919 Uncharacterized protein family UPF0004 11 90 4.9E-19 T 09-03-2017 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 NA29_RS09960 47923af69599ea53cbc0c5006d00fdae 455 Gene3D G3DSA:3.80.30.20 144 387 9.7E-70 T 09-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe NA29_RS09960 47923af69599ea53cbc0c5006d00fdae 455 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 10 454 60.796 T 09-03-2017 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 NA29_RS09960 47923af69599ea53cbc0c5006d00fdae 455 Gene3D G3DSA:2.40.50.140 390 455 8.0E-24 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS09960 47923af69599ea53cbc0c5006d00fdae 455 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 11 452 3.1E-97 T 09-03-2017 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 NA29_RS09960 47923af69599ea53cbc0c5006d00fdae 455 SUPERFAMILY SSF102114 122 380 6.67E-50 T 09-03-2017 NA29_RS09960 47923af69599ea53cbc0c5006d00fdae 455 Pfam PF04055 Radical SAM superfamily 152 333 1.2E-29 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 NA29_RS09960 47923af69599ea53cbc0c5006d00fdae 455 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 09-03-2017 IPR020612 Methylthiotransferase, conserved site GO:0051539 NA29_RS09960 47923af69599ea53cbc0c5006d00fdae 455 SMART SM00729 146 375 3.2E-52 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NA29_RS09960 47923af69599ea53cbc0c5006d00fdae 455 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 11 452 5.9E-169 T 09-03-2017 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 NA29_RS13085 ed6b180975fd92866a7a08731763d4ea 338 Gene3D G3DSA:3.40.710.10 220 281 2.7E-15 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS13085 ed6b180975fd92866a7a08731763d4ea 338 Gene3D G3DSA:3.40.710.10 65 187 2.7E-15 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS13085 ed6b180975fd92866a7a08731763d4ea 338 SUPERFAMILY SSF56601 53 187 6.6E-19 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS13085 ed6b180975fd92866a7a08731763d4ea 338 SUPERFAMILY SSF56601 220 311 6.6E-19 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS13085 ed6b180975fd92866a7a08731763d4ea 338 Pfam PF13354 Beta-lactamase enzyme family 66 251 2.8E-13 T 09-03-2017 NA29_RS05415 edc3f36516af4d2b807ee6c63301a663 491 Gene3D G3DSA:3.40.605.10 13 269 3.6E-94 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS05415 edc3f36516af4d2b807ee6c63301a663 491 SUPERFAMILY SSF53720 13 483 1.96E-159 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS05415 edc3f36516af4d2b807ee6c63301a663 491 Gene3D G3DSA:3.40.309.10 270 443 4.5E-60 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS05415 edc3f36516af4d2b807ee6c63301a663 491 Pfam PF00171 Aldehyde dehydrogenase family 19 478 4.3E-159 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS05415 edc3f36516af4d2b807ee6c63301a663 491 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS05415 edc3f36516af4d2b807ee6c63301a663 491 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS12875 1a9756596f2a7a121650cca673305d8a 477 Gene3D G3DSA:3.40.605.10 6 258 6.0E-87 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS12875 1a9756596f2a7a121650cca673305d8a 477 Pfam PF00171 Aldehyde dehydrogenase family 13 469 3.1E-164 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS12875 1a9756596f2a7a121650cca673305d8a 477 SUPERFAMILY SSF53720 4 470 7.07E-159 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS12875 1a9756596f2a7a121650cca673305d8a 477 Gene3D G3DSA:3.40.309.10 259 445 3.2E-64 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS12875 1a9756596f2a7a121650cca673305d8a 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS18760 17272fe5a96ee61b139006ad1d3be3d9 409 SUPERFAMILY SSF56935 30 409 6.11E-68 T 09-03-2017 NA29_RS18760 17272fe5a96ee61b139006ad1d3be3d9 409 PRINTS PR00184 Neisseria sp. porin signature 199 216 2.2E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS18760 17272fe5a96ee61b139006ad1d3be3d9 409 PRINTS PR00184 Neisseria sp. porin signature 68 93 2.2E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS18760 17272fe5a96ee61b139006ad1d3be3d9 409 PRINTS PR00184 Neisseria sp. porin signature 169 186 2.2E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS18760 17272fe5a96ee61b139006ad1d3be3d9 409 Pfam PF13609 Gram-negative porin 19 378 2.3E-39 T 09-03-2017 NA29_RS18760 17272fe5a96ee61b139006ad1d3be3d9 409 Gene3D G3DSA:2.40.160.10 30 409 4.4E-79 T 09-03-2017 IPR023614 Porin domain NA29_RS15035 cfc9190a5aa8f8694d2557db59d7489e 163 Pfam PF12838 4Fe-4S dicluster domain 63 116 1.8E-11 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NA29_RS15035 cfc9190a5aa8f8694d2557db59d7489e 163 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 11 160 27.808 T 09-03-2017 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15035 cfc9190a5aa8f8694d2557db59d7489e 163 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 141 4.5E-45 T 09-03-2017 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15035 cfc9190a5aa8f8694d2557db59d7489e 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS15035 cfc9190a5aa8f8694d2557db59d7489e 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS15035 cfc9190a5aa8f8694d2557db59d7489e 163 Gene3D G3DSA:1.10.1060.10 16 129 1.4E-21 T 09-03-2017 NA29_RS15035 cfc9190a5aa8f8694d2557db59d7489e 163 SUPERFAMILY SSF54862 37 146 3.52E-25 T 09-03-2017 NA29_RS08980 80c0d12b1e08c4e5bc6562027be879d8 236 SMART SM00862 154 230 2.1E-25 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS08980 80c0d12b1e08c4e5bc6562027be879d8 236 SUPERFAMILY SSF52172 6 189 3.77E-37 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS08980 80c0d12b1e08c4e5bc6562027be879d8 236 Pfam PF00072 Response regulator receiver domain 8 117 2.5E-28 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS08980 80c0d12b1e08c4e5bc6562027be879d8 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 230 9.5E-24 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS08980 80c0d12b1e08c4e5bc6562027be879d8 236 Gene3D G3DSA:3.40.50.2300 2 125 1.2E-36 T 09-03-2017 NA29_RS08980 80c0d12b1e08c4e5bc6562027be879d8 236 SMART SM00448 6 116 5.3E-37 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS08980 80c0d12b1e08c4e5bc6562027be879d8 236 Gene3D G3DSA:1.10.10.10 133 233 1.1E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16655 36d81fb724c9d0ece79e465412ec20e4 377 SUPERFAMILY SSF56645 3 241 4.32E-84 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NA29_RS16655 36d81fb724c9d0ece79e465412ec20e4 377 Gene3D G3DSA:2.40.110.10 120 215 4.7E-41 T 09-03-2017 NA29_RS16655 36d81fb724c9d0ece79e465412ec20e4 377 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 116 1.5E-39 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS16655 36d81fb724c9d0ece79e465412ec20e4 377 Gene3D G3DSA:1.20.140.10 216 376 1.2E-67 T 09-03-2017 NA29_RS16655 36d81fb724c9d0ece79e465412ec20e4 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 376 5.4E-51 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS16655 36d81fb724c9d0ece79e465412ec20e4 377 SUPERFAMILY SSF47203 226 376 1.22E-58 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS16655 36d81fb724c9d0ece79e465412ec20e4 377 Gene3D G3DSA:1.10.540.10 4 119 3.5E-44 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS16655 36d81fb724c9d0ece79e465412ec20e4 377 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 3.2E-28 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NA29_RS16655 36d81fb724c9d0ece79e465412ec20e4 377 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 09-03-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NA29_RS05275 3a39fde9d9b41e4efbdf7c4aa19fffeb 234 SUPERFAMILY SSF52833 2 101 1.03E-11 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS05275 3a39fde9d9b41e4efbdf7c4aa19fffeb 234 Gene3D G3DSA:3.40.30.10 8 75 9.8E-8 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS05275 3a39fde9d9b41e4efbdf7c4aa19fffeb 234 Pfam PF17171 Glutathione S-transferase, C-terminal domain 168 225 1.3E-16 T 09-03-2017 IPR033468 Metaxin, glutathione S-transferase domain NA29_RS05275 3a39fde9d9b41e4efbdf7c4aa19fffeb 234 SUPERFAMILY SSF47616 142 226 5.57E-11 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS05275 3a39fde9d9b41e4efbdf7c4aa19fffeb 234 SUPERFAMILY SSF47616 82 107 5.57E-11 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS05275 3a39fde9d9b41e4efbdf7c4aa19fffeb 234 Pfam PF17172 Glutathione S-transferase N-terminal domain 18 114 1.8E-24 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS05275 3a39fde9d9b41e4efbdf7c4aa19fffeb 234 Gene3D G3DSA:1.20.1050.10 142 226 2.7E-8 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS06165 b01a3d92bccb3725d1620b21f41612a4 238 Pfam PF07729 FCD domain 95 218 7.3E-23 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS06165 b01a3d92bccb3725d1620b21f41612a4 238 SMART SM00895 95 219 6.4E-17 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS06165 b01a3d92bccb3725d1620b21f41612a4 238 SUPERFAMILY SSF46785 17 89 1.3E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06165 b01a3d92bccb3725d1620b21f41612a4 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 4.0E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS06165 b01a3d92bccb3725d1620b21f41612a4 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 4.0E-7 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS06165 b01a3d92bccb3725d1620b21f41612a4 238 Gene3D G3DSA:1.10.10.10 4 86 7.1E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06165 b01a3d92bccb3725d1620b21f41612a4 238 SUPERFAMILY SSF48008 91 226 4.45E-21 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS06165 b01a3d92bccb3725d1620b21f41612a4 238 SMART SM00345 27 85 5.2E-17 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS06165 b01a3d92bccb3725d1620b21f41612a4 238 Gene3D G3DSA:1.20.120.530 88 229 3.9E-23 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS06165 b01a3d92bccb3725d1620b21f41612a4 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 85 1.3E-18 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS18965 a129da8aa523e356c8cbca3f91298c13 224 Gene3D G3DSA:1.20.120.80 45 221 9.5E-52 T 09-03-2017 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18965 a129da8aa523e356c8cbca3f91298c13 224 Pfam PF00510 Cytochrome c oxidase subunit III 43 221 1.7E-15 T 09-03-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18965 a129da8aa523e356c8cbca3f91298c13 224 SUPERFAMILY SSF81452 42 221 2.75E-56 T 09-03-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS18965 a129da8aa523e356c8cbca3f91298c13 224 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 44 223 6.0E-82 T 09-03-2017 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 NA29_RS11595 2a51a09472de2ffe20e0211bf2a0facd 512 SMART SM00304 210 262 4.0E-9 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS11595 2a51a09472de2ffe20e0211bf2a0facd 512 SMART SM00283 263 510 9.2E-87 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS11595 2a51a09472de2ffe20e0211bf2a0facd 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 313 2.3E-58 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS11595 2a51a09472de2ffe20e0211bf2a0facd 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 2.3E-58 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS11595 2a51a09472de2ffe20e0211bf2a0facd 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 2.3E-58 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS11595 2a51a09472de2ffe20e0211bf2a0facd 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.3E-58 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS11595 2a51a09472de2ffe20e0211bf2a0facd 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 388 2.3E-58 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS11595 2a51a09472de2ffe20e0211bf2a0facd 512 SUPERFAMILY SSF58104 230 511 1.7E-68 T 09-03-2017 NA29_RS11595 2a51a09472de2ffe20e0211bf2a0facd 512 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 509 7.1E-58 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS11595 2a51a09472de2ffe20e0211bf2a0facd 512 Pfam PF02203 Tar ligand binding domain homologue 1 170 4.0E-29 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 NA29_RS11595 2a51a09472de2ffe20e0211bf2a0facd 512 SUPERFAMILY SSF47170 26 150 1.46E-5 T 09-03-2017 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 NA29_RS11595 2a51a09472de2ffe20e0211bf2a0facd 512 Pfam PF00672 HAMP domain 190 258 2.1E-10 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS11595 2a51a09472de2ffe20e0211bf2a0facd 512 Gene3D G3DSA:1.10.287.950 278 482 1.5E-58 T 09-03-2017 NA29_RS19555 4929beb91ada1fc8bdff4bddc28c0f06 281 Gene3D G3DSA:3.40.50.620 167 216 1.2E-32 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS19555 4929beb91ada1fc8bdff4bddc28c0f06 281 Gene3D G3DSA:3.40.50.620 1 53 1.2E-32 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS19555 4929beb91ada1fc8bdff4bddc28c0f06 281 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 1 256 5.9E-105 T 09-03-2017 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 NA29_RS19555 4929beb91ada1fc8bdff4bddc28c0f06 281 SUPERFAMILY SSF52374 1 240 1.84E-71 T 09-03-2017 NA29_RS19555 4929beb91ada1fc8bdff4bddc28c0f06 281 PRINTS PR00987 Glutamyl-tRNA synthetase signature 181 189 2.6E-5 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 NA29_RS19555 4929beb91ada1fc8bdff4bddc28c0f06 281 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 17 2.6E-5 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 NA29_RS19555 4929beb91ada1fc8bdff4bddc28c0f06 281 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 34 2.6E-5 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 NA29_RS19555 4929beb91ada1fc8bdff4bddc28c0f06 281 PRINTS PR00987 Glutamyl-tRNA synthetase signature 165 175 2.6E-5 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 NA29_RS19555 4929beb91ada1fc8bdff4bddc28c0f06 281 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 1 277 36.613 T 09-03-2017 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 NA29_RS19555 4929beb91ada1fc8bdff4bddc28c0f06 281 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 1 230 5.2E-32 T 09-03-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 NA29_RS19555 4929beb91ada1fc8bdff4bddc28c0f06 281 Gene3D G3DSA:3.90.800.10 54 164 2.8E-17 T 09-03-2017 NA29_RS09955 5aaf7243c1dc1b08bc527fabcd42514f 200 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 10 116 3.0E-45 T 09-03-2017 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 NA29_RS09955 5aaf7243c1dc1b08bc527fabcd42514f 200 Pfam PF05233 PHB accumulation regulatory domain 126 165 3.5E-17 T 09-03-2017 IPR007897 PHB accumulation regulatory NA29_RS09955 5aaf7243c1dc1b08bc527fabcd42514f 200 Pfam PF05233 PHB accumulation regulatory domain 75 113 3.7E-18 T 09-03-2017 IPR007897 PHB accumulation regulatory NA29_RS09955 5aaf7243c1dc1b08bc527fabcd42514f 200 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 11 70 1.3E-31 T 09-03-2017 IPR012909 PHA accumulation regulator DNA-binding, N-terminal NA29_RS18455 03d13b493690f0b1cd1da02b565c5fc0 165 SUPERFAMILY SSF55961 11 163 2.75E-45 T 09-03-2017 NA29_RS18455 03d13b493690f0b1cd1da02b565c5fc0 165 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 22 164 1.0E-35 T 09-03-2017 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 NA29_RS18455 03d13b493690f0b1cd1da02b565c5fc0 165 Gene3D G3DSA:3.30.530.20 10 164 1.3E-49 T 09-03-2017 IPR023393 START-like domain NA29_RS10095 ad13d283dfe62782ae1362b67595abfd 181 Pfam PF00589 Phage integrase family 1 143 7.0E-15 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS10095 ad13d283dfe62782ae1362b67595abfd 181 SUPERFAMILY SSF56349 1 153 1.41E-27 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NA29_RS10095 ad13d283dfe62782ae1362b67595abfd 181 Gene3D G3DSA:1.10.443.10 1 154 3.1E-28 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS13595 9dc812a0244d39af1c1a2746a0d5002b 263 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 255 9.8E-119 T 09-03-2017 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 NA29_RS13595 9dc812a0244d39af1c1a2746a0d5002b 263 PIRSF PIRSF006241 1 261 4.1E-96 T 09-03-2017 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 NA29_RS13595 9dc812a0244d39af1c1a2746a0d5002b 263 Gene3D G3DSA:3.20.20.150 1 256 3.9E-93 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain NA29_RS13595 9dc812a0244d39af1c1a2746a0d5002b 263 SUPERFAMILY SSF51658 1 256 1.96E-86 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain NA29_RS13595 9dc812a0244d39af1c1a2746a0d5002b 263 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 1.3E-34 T 09-03-2017 IPR013022 Xylose isomerase-like, TIM barrel domain NA29_RS08820 1728344c8f44e8cc7f120b4a328f85ad 405 SUPERFAMILY SSF55961 224 370 5.5E-25 T 09-03-2017 NA29_RS08820 1728344c8f44e8cc7f120b4a328f85ad 405 Gene3D G3DSA:3.10.20.30 3 75 6.5E-27 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS08820 1728344c8f44e8cc7f120b4a328f85ad 405 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 60 2.7E-6 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS08820 1728344c8f44e8cc7f120b4a328f85ad 405 SUPERFAMILY SSF54292 4 79 1.21E-22 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS08820 1728344c8f44e8cc7f120b4a328f85ad 405 SUPERFAMILY SSF47741 85 165 1.57E-24 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS08820 1728344c8f44e8cc7f120b4a328f85ad 405 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NA29_RS08820 1728344c8f44e8cc7f120b4a328f85ad 405 Pfam PF01799 [2Fe-2S] binding domain 74 146 1.1E-20 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS08820 1728344c8f44e8cc7f120b4a328f85ad 405 Gene3D G3DSA:3.30.530.20 224 369 7.0E-34 T 09-03-2017 IPR023393 START-like domain NA29_RS08820 1728344c8f44e8cc7f120b4a328f85ad 405 Gene3D G3DSA:1.10.150.120 76 177 5.3E-26 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS08820 1728344c8f44e8cc7f120b4a328f85ad 405 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 227 368 1.5E-17 T 09-03-2017 IPR010419 Carbon monoxide dehydrogenase subunit G NA29_RS04915 a0abf5668fb4814048bb987ee4484d3c 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 138 3.8E-31 T 09-03-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 NA29_RS16370 e69d9021e28be4bf858d08e254708e9c 447 SMART SM00345 9 68 8.8E-12 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16370 e69d9021e28be4bf858d08e254708e9c 447 SUPERFAMILY SSF53383 87 437 4.18E-59 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS16370 e69d9021e28be4bf858d08e254708e9c 447 Pfam PF00155 Aminotransferase class I and II 124 430 6.6E-15 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS16370 e69d9021e28be4bf858d08e254708e9c 447 Gene3D G3DSA:3.90.1150.10 370 443 1.7E-5 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS16370 e69d9021e28be4bf858d08e254708e9c 447 Gene3D G3DSA:1.10.10.10 5 69 2.3E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16370 e69d9021e28be4bf858d08e254708e9c 447 SUPERFAMILY SSF46785 6 72 4.74E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16370 e69d9021e28be4bf858d08e254708e9c 447 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 3.4E-11 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16370 e69d9021e28be4bf858d08e254708e9c 447 Gene3D G3DSA:3.40.640.10 120 332 3.8E-42 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS15000 8ce2180d541d18ff1fbcf3924d931536 196 Pfam PF00293 NUDIX domain 49 160 3.9E-16 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 NA29_RS15000 8ce2180d541d18ff1fbcf3924d931536 196 SUPERFAMILY SSF55811 16 181 1.76E-45 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS15000 8ce2180d541d18ff1fbcf3924d931536 196 Gene3D G3DSA:3.90.79.10 15 181 4.0E-53 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS15075 b97de51344966801d6866943c982bc6b 119 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 2 119 20.124 T 09-03-2017 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 NA29_RS15075 b97de51344966801d6866943c982bc6b 119 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 118 5.4E-38 T 09-03-2017 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS03480 0131a202e759189f7a4a84add6544400 108 Gene3D G3DSA:1.10.10.10 3 103 6.7E-36 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03480 0131a202e759189f7a4a84add6544400 108 SUPERFAMILY SSF46785 5 98 1.29E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03480 0131a202e759189f7a4a84add6544400 108 Pfam PF01638 HxlR-like helix-turn-helix 16 98 2.1E-29 T 09-03-2017 IPR002577 Helix-turn-helix, HxlR type NA29_RS23025 53889d78cecbda75bffd450c6df9d0f1 382 Gene3D G3DSA:3.40.50.1970 2 183 1.0E-61 T 09-03-2017 NA29_RS23025 53889d78cecbda75bffd450c6df9d0f1 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 NA29_RS23025 53889d78cecbda75bffd450c6df9d0f1 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 NA29_RS23025 53889d78cecbda75bffd450c6df9d0f1 382 Gene3D G3DSA:1.20.1090.10 184 382 9.7E-79 T 09-03-2017 NA29_RS23025 53889d78cecbda75bffd450c6df9d0f1 382 SUPERFAMILY SSF56796 4 381 5.5E-135 T 09-03-2017 NA29_RS23025 53889d78cecbda75bffd450c6df9d0f1 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 374 1.3E-128 T 09-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 NA29_RS23195 87bc17d8f11ba8566d2ed185c97b0760 67 Pfam PF05489 Phage Tail Protein X 1 57 7.8E-29 T 09-03-2017 IPR008861 Phage Tail Protein X-like NA29_RS05050 c17349d2e6437f9b3415e8bac988c403 383 Pfam PF13458 Periplasmic binding protein 13 344 5.4E-61 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS05050 c17349d2e6437f9b3415e8bac988c403 383 Gene3D G3DSA:3.40.50.2300 12 215 2.8E-55 T 09-03-2017 NA29_RS05050 c17349d2e6437f9b3415e8bac988c403 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 271 284 7.6E-8 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS05050 c17349d2e6437f9b3415e8bac988c403 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 14 30 7.6E-8 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS05050 c17349d2e6437f9b3415e8bac988c403 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 36 52 7.6E-8 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS05050 c17349d2e6437f9b3415e8bac988c403 383 SUPERFAMILY SSF53822 13 373 5.18E-80 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS06370 f6e496b9c19fe758bb1bdfe51dfb8d7b 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 3.7E-15 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS06370 f6e496b9c19fe758bb1bdfe51dfb8d7b 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 3.7E-15 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS06370 f6e496b9c19fe758bb1bdfe51dfb8d7b 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 3.7E-15 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS06370 f6e496b9c19fe758bb1bdfe51dfb8d7b 154 SUPERFAMILY SSF46785 3 63 2.09E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06370 f6e496b9c19fe758bb1bdfe51dfb8d7b 154 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 51 4.0E-19 T 09-03-2017 NA29_RS06370 f6e496b9c19fe758bb1bdfe51dfb8d7b 154 SMART SM00344 4 113 6.0E-42 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NA29_RS06370 f6e496b9c19fe758bb1bdfe51dfb8d7b 154 Pfam PF01037 Lrp/AsnC ligand binding domain 70 144 9.7E-19 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS06370 f6e496b9c19fe758bb1bdfe51dfb8d7b 154 Gene3D G3DSA:1.10.10.10 1 55 2.0E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06370 f6e496b9c19fe758bb1bdfe51dfb8d7b 154 SUPERFAMILY SSF54909 64 153 7.78E-20 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS06370 f6e496b9c19fe758bb1bdfe51dfb8d7b 154 Gene3D G3DSA:3.30.70.920 58 140 1.0E-24 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS12605 142008a27ab9f549c7af48ad1b2797bf 655 SMART SM00843 590 655 1.6E-35 T 09-03-2017 IPR018541 FtsK gamma domain NA29_RS12605 142008a27ab9f549c7af48ad1b2797bf 655 Pfam PF01580 FtsK/SpoIIIE family 276 485 3.1E-68 T 09-03-2017 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 NA29_RS12605 142008a27ab9f549c7af48ad1b2797bf 655 SUPERFAMILY SSF52540 273 558 2.23E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS12605 142008a27ab9f549c7af48ad1b2797bf 655 Pfam PF09397 Ftsk gamma domain 592 652 1.6E-25 T 09-03-2017 IPR018541 FtsK gamma domain NA29_RS12605 142008a27ab9f549c7af48ad1b2797bf 655 SUPERFAMILY SSF46785 590 653 7.26E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12605 142008a27ab9f549c7af48ad1b2797bf 655 SMART SM00382 311 506 7.9E-4 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS12605 142008a27ab9f549c7af48ad1b2797bf 655 Gene3D G3DSA:3.40.50.300 249 552 1.5E-96 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08515 688173377c5f66dd0890544d8c60d419 316 SUPERFAMILY SSF47384 85 159 1.96E-7 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS08515 688173377c5f66dd0890544d8c60d419 316 Gene3D G3DSA:3.30.565.10 169 315 2.8E-27 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS08515 688173377c5f66dd0890544d8c60d419 316 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 210 315 2.3E-15 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS08515 688173377c5f66dd0890544d8c60d419 316 PRINTS PR00344 Bacterial sensor protein C-terminal signature 277 295 5.4E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS08515 688173377c5f66dd0890544d8c60d419 316 PRINTS PR00344 Bacterial sensor protein C-terminal signature 301 314 5.4E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS08515 688173377c5f66dd0890544d8c60d419 316 PRINTS PR00344 Bacterial sensor protein C-terminal signature 248 262 5.4E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS08515 688173377c5f66dd0890544d8c60d419 316 PRINTS PR00344 Bacterial sensor protein C-terminal signature 266 276 5.4E-9 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS08515 688173377c5f66dd0890544d8c60d419 316 Pfam PF00512 His Kinase A (phospho-acceptor) domain 99 158 1.5E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS08515 688173377c5f66dd0890544d8c60d419 316 SMART SM00388 97 165 3.0E-5 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS08515 688173377c5f66dd0890544d8c60d419 316 Gene3D G3DSA:1.10.287.130 99 157 5.7E-4 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS08515 688173377c5f66dd0890544d8c60d419 316 SMART SM00387 209 316 3.5E-20 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS08515 688173377c5f66dd0890544d8c60d419 316 SUPERFAMILY SSF55874 169 315 6.55E-28 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS06735 c8f79565e237674ececf0cbc57309047 197 Gene3D G3DSA:3.40.50.150 5 168 9.5E-29 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS06735 c8f79565e237674ececf0cbc57309047 197 SUPERFAMILY SSF53335 7 151 3.5E-29 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS06735 c8f79565e237674ececf0cbc57309047 197 Pfam PF13649 Methyltransferase domain 46 134 2.3E-14 T 09-03-2017 NA29_RS08810 a3c243980cde569f41a70495d2aac511 805 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 31 139 2.0E-12 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS08810 a3c243980cde569f41a70495d2aac511 805 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 156 719 5.9E-151 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS08810 a3c243980cde569f41a70495d2aac511 805 SUPERFAMILY SSF54665 7 162 1.14E-29 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS08810 a3c243980cde569f41a70495d2aac511 805 Gene3D G3DSA:3.30.365.10 463 611 1.7E-40 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS08810 a3c243980cde569f41a70495d2aac511 805 SUPERFAMILY SSF56003 131 782 3.79E-174 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS08810 a3c243980cde569f41a70495d2aac511 805 Gene3D G3DSA:3.30.365.10 634 782 3.2E-57 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS08810 a3c243980cde569f41a70495d2aac511 805 Gene3D G3DSA:3.30.365.10 375 462 3.2E-57 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS08810 a3c243980cde569f41a70495d2aac511 805 Gene3D G3DSA:3.30.365.10 291 368 2.3E-22 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS08810 a3c243980cde569f41a70495d2aac511 805 Gene3D G3DSA:3.30.365.10 129 182 2.3E-22 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS08810 a3c243980cde569f41a70495d2aac511 805 SMART SM01008 30 139 1.1E-22 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS08810 a3c243980cde569f41a70495d2aac511 805 Gene3D G3DSA:3.90.1170.50 3 128 4.0E-23 T 09-03-2017 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead NA29_RS08810 a3c243980cde569f41a70495d2aac511 805 Gene3D G3DSA:3.30.365.10 183 289 3.5E-31 T 09-03-2017 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 NA29_RS07515 5642949492925a0270eb6b9e57acbf95 376 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 358 4.6E-51 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS03580 ad68319978ecbc61139d3a5a25b854a5 444 Pfam PF07690 Major Facilitator Superfamily 66 398 4.6E-26 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS03580 ad68319978ecbc61139d3a5a25b854a5 444 Gene3D G3DSA:1.20.1250.20 252 441 2.0E-26 T 09-03-2017 NA29_RS03580 ad68319978ecbc61139d3a5a25b854a5 444 Gene3D G3DSA:1.20.1250.20 25 233 4.1E-22 T 09-03-2017 NA29_RS03580 ad68319978ecbc61139d3a5a25b854a5 444 SUPERFAMILY SSF103473 22 440 3.4E-65 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS02175 adeb6cf9089d46d7372a6504a55acfc8 428 Gene3D G3DSA:3.40.1090.10 9 221 1.3E-11 T 09-03-2017 NA29_RS02175 adeb6cf9089d46d7372a6504a55acfc8 428 SUPERFAMILY SSF52151 3 242 1.18E-39 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NA29_RS02175 adeb6cf9089d46d7372a6504a55acfc8 428 Pfam PF01734 Patatin-like phospholipase 9 225 2.9E-17 T 09-03-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NA29_RS05975 cdb92d676241d072d9050fbdaa85d843 80 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 6 70 3.2E-27 T 09-03-2017 IPR024530 Putative quorum-sensing-regulated virulence factor NA29_RS05975 cdb92d676241d072d9050fbdaa85d843 80 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 17 70 6.0E-22 T 09-03-2017 IPR024530 Putative quorum-sensing-regulated virulence factor NA29_RS18530 3ed75222b335fec78d08bb4987e58c01 213 Pfam PF00072 Response regulator receiver domain 7 119 2.9E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS18530 3ed75222b335fec78d08bb4987e58c01 213 Gene3D G3DSA:1.10.10.10 123 212 2.0E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18530 3ed75222b335fec78d08bb4987e58c01 213 Gene3D G3DSA:3.40.50.2300 4 122 1.2E-35 T 09-03-2017 NA29_RS18530 3ed75222b335fec78d08bb4987e58c01 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 1.5E-15 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS18530 3ed75222b335fec78d08bb4987e58c01 213 SMART SM00448 5 118 4.0E-30 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS18530 3ed75222b335fec78d08bb4987e58c01 213 SUPERFAMILY SSF46894 143 212 1.7E-19 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS18530 3ed75222b335fec78d08bb4987e58c01 213 SUPERFAMILY SSF52172 5 135 2.56E-34 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS18530 3ed75222b335fec78d08bb4987e58c01 213 SMART SM00421 149 206 6.6E-18 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS18530 3ed75222b335fec78d08bb4987e58c01 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 3.0E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS18530 3ed75222b335fec78d08bb4987e58c01 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 3.0E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS18530 3ed75222b335fec78d08bb4987e58c01 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 3.0E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS13370 146e8aa5e4171a4e1e1e15584ae6206b 159 Gene3D G3DSA:3.40.630.30 11 150 9.1E-33 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS13370 146e8aa5e4171a4e1e1e15584ae6206b 159 Pfam PF00583 Acetyltransferase (GNAT) family 53 126 1.2E-14 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS13370 146e8aa5e4171a4e1e1e15584ae6206b 159 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 16 148 6.5E-36 T 09-03-2017 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 NA29_RS13370 146e8aa5e4171a4e1e1e15584ae6206b 159 SUPERFAMILY SSF55729 9 151 2.4E-34 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS20155 589b630bd504369c0e4652d93d85adac 341 Gene3D G3DSA:3.30.43.10 8 73 7.6E-23 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NA29_RS20155 589b630bd504369c0e4652d93d85adac 341 Gene3D G3DSA:3.30.465.10 88 241 7.0E-50 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS20155 589b630bd504369c0e4652d93d85adac 341 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 341 84.195 T 09-03-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS20155 589b630bd504369c0e4652d93d85adac 341 Pfam PF01565 FAD binding domain 23 158 3.6E-18 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NA29_RS20155 589b630bd504369c0e4652d93d85adac 341 Gene3D G3DSA:3.90.78.10 242 340 6.3E-44 T 09-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS20155 589b630bd504369c0e4652d93d85adac 341 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 217 340 7.3E-37 T 09-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS20155 589b630bd504369c0e4652d93d85adac 341 SUPERFAMILY SSF56176 10 199 1.26E-39 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS20155 589b630bd504369c0e4652d93d85adac 341 SUPERFAMILY SSF56194 214 340 7.72E-48 T 09-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS20155 589b630bd504369c0e4652d93d85adac 341 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 10 340 5.7E-70 T 09-03-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS19300 a095a77e92b16bc7b18898f6ff3a5024 141 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 116 5.7E-12 T 09-03-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 NA29_RS19300 a095a77e92b16bc7b18898f6ff3a5024 141 SUPERFAMILY SSF51316 3 135 1.0E-22 T 09-03-2017 IPR011057 Mss4-like NA29_RS19300 a095a77e92b16bc7b18898f6ff3a5024 141 Gene3D G3DSA:3.90.1590.10 2 129 6.0E-18 T 09-03-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 NA29_RS25155 f0bad77023bcfe613a30d5d78d945b13 165 Pfam PF12802 MarR family 33 93 5.8E-9 T 09-03-2017 NA29_RS25155 f0bad77023bcfe613a30d5d78d945b13 165 Gene3D G3DSA:1.10.10.10 7 143 3.7E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS25155 f0bad77023bcfe613a30d5d78d945b13 165 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 9 137 3.3E-43 T 09-03-2017 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 NA29_RS25155 f0bad77023bcfe613a30d5d78d945b13 165 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 09-03-2017 IPR023187 Transcriptional regulator MarR-type, conserved site NA29_RS25155 f0bad77023bcfe613a30d5d78d945b13 165 SMART SM00347 27 132 9.8E-16 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS25155 f0bad77023bcfe613a30d5d78d945b13 165 SUPERFAMILY SSF46785 8 143 3.54E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS23605 00339ca0c978eed2fcb7a25b5e2be013 442 SUPERFAMILY SSF103473 6 413 3.27E-76 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS23605 00339ca0c978eed2fcb7a25b5e2be013 442 PIRSF PIRSF002808 1 424 1.1E-40 T 09-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 NA29_RS23605 00339ca0c978eed2fcb7a25b5e2be013 442 Pfam PF07690 Major Facilitator Superfamily 301 425 1.0E-8 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS23605 00339ca0c978eed2fcb7a25b5e2be013 442 Pfam PF07690 Major Facilitator Superfamily 17 298 1.5E-48 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS23605 00339ca0c978eed2fcb7a25b5e2be013 442 Gene3D G3DSA:1.20.1250.20 8 199 1.9E-48 T 09-03-2017 NA29_RS23605 00339ca0c978eed2fcb7a25b5e2be013 442 Gene3D G3DSA:1.20.1250.20 222 415 9.4E-22 T 09-03-2017 NA29_RS04625 16aca7b59ade651fe24f4cc2d11fd3d1 208 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 4 203 3.4E-75 T 09-03-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 NA29_RS04625 16aca7b59ade651fe24f4cc2d11fd3d1 208 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 123 136 - T 09-03-2017 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 NA29_RS04625 16aca7b59ade651fe24f4cc2d11fd3d1 208 Pfam PF01081 KDPG and KHG aldolase 3 198 1.4E-67 T 09-03-2017 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 NA29_RS04625 16aca7b59ade651fe24f4cc2d11fd3d1 208 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 35 44 - T 09-03-2017 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 NA29_RS04625 16aca7b59ade651fe24f4cc2d11fd3d1 208 SUPERFAMILY SSF51569 2 203 3.48E-64 T 09-03-2017 NA29_RS04625 16aca7b59ade651fe24f4cc2d11fd3d1 208 Gene3D G3DSA:3.20.20.70 2 204 7.0E-72 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS14475 41252d335db48c72e51ccbdcf182e67f 343 SUPERFAMILY SSF53850 32 283 9.97E-43 T 09-03-2017 NA29_RS14475 41252d335db48c72e51ccbdcf182e67f 343 Pfam PF13379 NMT1-like family 33 261 6.2E-25 T 09-03-2017 NA29_RS14475 41252d335db48c72e51ccbdcf182e67f 343 Gene3D G3DSA:3.40.190.10 128 251 2.2E-21 T 09-03-2017 NA29_RS11120 4eabdc2de767fc9849c7bdc4a0651fe5 169 SUPERFAMILY SSF88659 86 160 9.59E-14 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS11120 4eabdc2de767fc9849c7bdc4a0651fe5 169 Gene3D G3DSA:1.10.10.10 107 160 1.4E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11120 4eabdc2de767fc9849c7bdc4a0651fe5 169 SUPERFAMILY SSF88946 6 74 2.16E-11 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS11120 4eabdc2de767fc9849c7bdc4a0651fe5 169 Pfam PF08281 Sigma-70, region 4 109 160 1.3E-16 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS11120 4eabdc2de767fc9849c7bdc4a0651fe5 169 Pfam PF04542 Sigma-70 region 2 12 76 4.1E-8 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS11120 4eabdc2de767fc9849c7bdc4a0651fe5 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 160 1.1E-18 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS11120 4eabdc2de767fc9849c7bdc4a0651fe5 169 Gene3D G3DSA:1.10.1740.10 7 77 4.4E-9 T 09-03-2017 NA29_RS23210 9cf69c2185661c209d351220dfe95b8a 271 Gene3D G3DSA:1.10.101.10 5 69 3.1E-20 T 09-03-2017 IPR002477 Peptidoglycan binding-like NA29_RS23210 9cf69c2185661c209d351220dfe95b8a 271 SUPERFAMILY SSF47090 4 68 5.76E-16 T 09-03-2017 IPR002477 Peptidoglycan binding-like NA29_RS23210 9cf69c2185661c209d351220dfe95b8a 271 Pfam PF11860 Protein of unknown function (DUF3380) 93 265 3.7E-61 T 09-03-2017 IPR024408 Domain of unknown function DUF3380 NA29_RS23210 9cf69c2185661c209d351220dfe95b8a 271 Pfam PF01471 Putative peptidoglycan binding domain 14 68 1.0E-15 T 09-03-2017 IPR002477 Peptidoglycan binding-like NA29_RS17660 129ad544d3eee4d7363f269c23c4fd23 188 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 12 185 1.8E-55 T 09-03-2017 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 NA29_RS17660 129ad544d3eee4d7363f269c23c4fd23 188 SUPERFAMILY SSF52540 11 187 3.13E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17660 129ad544d3eee4d7363f269c23c4fd23 188 PIRSF PIRSF006135 10 188 8.6E-53 T 09-03-2017 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 NA29_RS17660 129ad544d3eee4d7363f269c23c4fd23 188 Gene3D G3DSA:3.40.50.300 12 187 3.3E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07845 5a8eb5b59f870b6cd163e85f7db67d59 256 Gene3D G3DSA:3.40.225.10 18 231 1.4E-62 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS07845 5a8eb5b59f870b6cd163e85f7db67d59 256 SMART SM01007 24 204 6.7E-60 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS07845 5a8eb5b59f870b6cd163e85f7db67d59 256 SUPERFAMILY SSF53639 15 224 9.03E-63 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS07845 5a8eb5b59f870b6cd163e85f7db67d59 256 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 25 204 3.1E-46 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS15990 2884b38755d106361fc38bd969952819 301 Gene3D G3DSA:1.10.10.10 3 89 2.3E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15990 2884b38755d106361fc38bd969952819 301 Gene3D G3DSA:3.40.190.10 182 268 9.0E-20 T 09-03-2017 NA29_RS15990 2884b38755d106361fc38bd969952819 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 1.5E-14 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS15990 2884b38755d106361fc38bd969952819 301 SUPERFAMILY SSF46785 6 87 4.9E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15990 2884b38755d106361fc38bd969952819 301 SUPERFAMILY SSF53850 94 296 3.26E-33 T 09-03-2017 NA29_RS15990 2884b38755d106361fc38bd969952819 301 Gene3D G3DSA:3.40.190.10 94 181 1.2E-15 T 09-03-2017 NA29_RS15990 2884b38755d106361fc38bd969952819 301 Gene3D G3DSA:3.40.190.10 270 300 1.1E-6 T 09-03-2017 NA29_RS15990 2884b38755d106361fc38bd969952819 301 Pfam PF03466 LysR substrate binding domain 97 299 7.6E-26 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS06325 40004963acfb95508f04b4aeafc3bdea 194 SUPERFAMILY SSF46689 4 83 7.48E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS06325 40004963acfb95508f04b4aeafc3bdea 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 7.5E-11 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS06325 40004963acfb95508f04b4aeafc3bdea 194 Gene3D G3DSA:1.10.357.10 13 190 2.2E-34 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS06325 40004963acfb95508f04b4aeafc3bdea 194 SUPERFAMILY SSF48498 84 190 2.89E-24 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS06325 40004963acfb95508f04b4aeafc3bdea 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.6E-6 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS06325 40004963acfb95508f04b4aeafc3bdea 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.6E-6 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS06325 40004963acfb95508f04b4aeafc3bdea 194 Pfam PF16925 Bacterial transcriptional repressor C-terminal 103 186 5.1E-10 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS12525 c695c2c10c9bc05a4d1533667fccca28 706 Gene3D G3DSA:3.30.70.270 272 439 3.3E-58 T 09-03-2017 NA29_RS12525 c695c2c10c9bc05a4d1533667fccca28 706 SMART SM00267 259 431 1.9E-61 T 09-03-2017 IPR000160 GGDEF domain NA29_RS12525 c695c2c10c9bc05a4d1533667fccca28 706 Pfam PF00563 EAL domain 447 683 1.7E-67 T 09-03-2017 IPR001633 EAL domain NA29_RS12525 c695c2c10c9bc05a4d1533667fccca28 706 Pfam PF03707 Bacterial signalling protein N terminal repeat 52 118 1.2E-19 T 09-03-2017 IPR005330 MHYT domain NA29_RS12525 c695c2c10c9bc05a4d1533667fccca28 706 Pfam PF03707 Bacterial signalling protein N terminal repeat 194 248 1.3E-6 T 09-03-2017 IPR005330 MHYT domain NA29_RS12525 c695c2c10c9bc05a4d1533667fccca28 706 Pfam PF03707 Bacterial signalling protein N terminal repeat 126 181 6.0E-15 T 09-03-2017 IPR005330 MHYT domain NA29_RS12525 c695c2c10c9bc05a4d1533667fccca28 706 Gene3D G3DSA:3.20.20.450 444 695 5.4E-87 T 09-03-2017 IPR001633 EAL domain NA29_RS12525 c695c2c10c9bc05a4d1533667fccca28 706 SMART SM00052 437 688 1.9E-90 T 09-03-2017 IPR001633 EAL domain NA29_RS12525 c695c2c10c9bc05a4d1533667fccca28 706 Pfam PF00990 Diguanylate cyclase, GGDEF domain 270 425 2.1E-48 T 09-03-2017 IPR000160 GGDEF domain NA29_RS12525 c695c2c10c9bc05a4d1533667fccca28 706 SUPERFAMILY SSF141868 447 695 4.97E-78 T 09-03-2017 IPR001633 EAL domain NA29_RS12525 c695c2c10c9bc05a4d1533667fccca28 706 SUPERFAMILY SSF55073 275 433 1.7E-49 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS12525 c695c2c10c9bc05a4d1533667fccca28 706 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 267 429 1.8E-44 T 09-03-2017 IPR000160 GGDEF domain NA29_RS24435 9e97f78ee4e57e23667facc528a0ca1e 385 PIRSF PIRSF000390 1 385 5.8E-117 T 09-03-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NA29_RS24435 9e97f78ee4e57e23667facc528a0ca1e 385 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 380 2.2E-137 T 09-03-2017 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase NA29_RS24435 9e97f78ee4e57e23667facc528a0ca1e 385 Gene3D G3DSA:3.90.1150.10 259 384 1.4E-41 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS24435 9e97f78ee4e57e23667facc528a0ca1e 385 SUPERFAMILY SSF53383 5 384 3.06E-120 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS24435 9e97f78ee4e57e23667facc528a0ca1e 385 Gene3D G3DSA:3.40.640.10 5 256 4.0E-88 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS09530 d29e3946a4cc614029f9f876664d951a 668 SUPERFAMILY SSF55124 119 245 3.76E-26 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09530 d29e3946a4cc614029f9f876664d951a 668 SUPERFAMILY SSF56014 239 399 1.7E-47 T 09-03-2017 NA29_RS09530 d29e3946a4cc614029f9f876664d951a 668 SUPERFAMILY SSF56014 528 666 3.14E-36 T 09-03-2017 NA29_RS09530 d29e3946a4cc614029f9f876664d951a 668 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 238 391 1.5E-42 T 09-03-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09530 d29e3946a4cc614029f9f876664d951a 668 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 570 663 4.8E-10 T 09-03-2017 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09530 d29e3946a4cc614029f9f876664d951a 668 Gene3D G3DSA:3.90.480.10 167 236 1.3E-34 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09530 d29e3946a4cc614029f9f876664d951a 668 Gene3D G3DSA:3.90.480.10 440 522 1.3E-34 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09530 d29e3946a4cc614029f9f876664d951a 668 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 169 229 3.7E-15 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09530 d29e3946a4cc614029f9f876664d951a 668 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 464 517 6.4E-14 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09530 d29e3946a4cc614029f9f876664d951a 668 SUPERFAMILY SSF55124 371 395 3.93E-23 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09530 d29e3946a4cc614029f9f876664d951a 668 SUPERFAMILY SSF55124 434 540 3.93E-23 T 09-03-2017 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 NA29_RS09530 d29e3946a4cc614029f9f876664d951a 668 Gene3D G3DSA:3.30.413.10 239 400 2.6E-43 T 09-03-2017 NA29_RS09530 d29e3946a4cc614029f9f876664d951a 668 Pfam PF11011 Protein of unknown function (DUF2849) 6 90 3.2E-23 T 09-03-2017 IPR021270 Protein of unknown function DUF2849 NA29_RS09530 d29e3946a4cc614029f9f876664d951a 668 Gene3D G3DSA:3.30.413.10 527 664 1.5E-33 T 09-03-2017 NA29_RS02355 4cad67e10fb7032d816ca6d8619ae118 174 Pfam PF08534 Redoxin 33 158 1.6E-26 T 09-03-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 NA29_RS02355 4cad67e10fb7032d816ca6d8619ae118 174 SUPERFAMILY SSF52833 35 172 2.99E-38 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS02355 4cad67e10fb7032d816ca6d8619ae118 174 Gene3D G3DSA:3.40.30.10 17 173 4.8E-46 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS18480 436f590a2cc485dd237dd2477682edeb 397 Gene3D G3DSA:3.90.1150.10 274 394 6.4E-29 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS18480 436f590a2cc485dd237dd2477682edeb 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 09-03-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 NA29_RS18480 436f590a2cc485dd237dd2477682edeb 397 Gene3D G3DSA:3.40.640.10 51 273 2.7E-71 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS18480 436f590a2cc485dd237dd2477682edeb 397 Pfam PF00155 Aminotransferase class I and II 38 390 2.8E-58 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS18480 436f590a2cc485dd237dd2477682edeb 397 SUPERFAMILY SSF53383 10 394 1.17E-106 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS24140 2e5f866eea5d7958d82bb65a49420160 322 Pfam PF01965 DJ-1/PfpI family 4 176 9.7E-26 T 09-03-2017 IPR002818 DJ-1/PfpI NA29_RS24140 2e5f866eea5d7958d82bb65a49420160 322 Gene3D G3DSA:1.10.10.60 269 317 1.1E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS24140 2e5f866eea5d7958d82bb65a49420160 322 SUPERFAMILY SSF46689 216 264 5.38E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS24140 2e5f866eea5d7958d82bb65a49420160 322 SUPERFAMILY SSF46689 268 317 2.28E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS24140 2e5f866eea5d7958d82bb65a49420160 322 SUPERFAMILY SSF52317 3 196 2.2E-48 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS24140 2e5f866eea5d7958d82bb65a49420160 322 Gene3D G3DSA:3.40.50.880 4 222 6.9E-56 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS24140 2e5f866eea5d7958d82bb65a49420160 322 SMART SM00342 231 314 2.4E-27 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS24140 2e5f866eea5d7958d82bb65a49420160 322 Pfam PF12833 Helix-turn-helix domain 237 315 2.9E-21 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS24140 2e5f866eea5d7958d82bb65a49420160 322 Gene3D G3DSA:1.10.10.60 223 268 5.4E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS23250 4ccd4b0fea891ddde0be00482b5c3456 204 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 144 1.6E-48 T 09-03-2017 IPR006521 Tail protein I NA29_RS23250 4ccd4b0fea891ddde0be00482b5c3456 204 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 144 3.8E-55 T 09-03-2017 IPR006521 Tail protein I NA29_RS07320 7c13a013855d6875364cc00931108050 233 SUPERFAMILY SSF46894 124 230 2.32E-29 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS07320 7c13a013855d6875364cc00931108050 233 SMART SM00448 3 116 4.0E-40 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS07320 7c13a013855d6875364cc00931108050 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 229 3.5E-27 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS07320 7c13a013855d6875364cc00931108050 233 Gene3D G3DSA:1.10.10.10 128 231 1.4E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07320 7c13a013855d6875364cc00931108050 233 SUPERFAMILY SSF52172 3 127 9.68E-43 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS07320 7c13a013855d6875364cc00931108050 233 Pfam PF00072 Response regulator receiver domain 5 117 4.6E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS07320 7c13a013855d6875364cc00931108050 233 Gene3D G3DSA:3.40.50.2300 4 125 2.5E-41 T 09-03-2017 NA29_RS07320 7c13a013855d6875364cc00931108050 233 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 229 1.6E-106 T 09-03-2017 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 NA29_RS07320 7c13a013855d6875364cc00931108050 233 SMART SM00862 154 229 1.7E-28 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS20730 2511fb111f27f06a4bfde182d9aa2cf8 286 SUPERFAMILY SSF161098 10 269 1.4E-45 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS20730 2511fb111f27f06a4bfde182d9aa2cf8 286 Gene3D G3DSA:1.10.3720.10 9 265 5.0E-45 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS20730 2511fb111f27f06a4bfde182d9aa2cf8 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 267 4.0E-10 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS09380 7923462203793d66bc726a7e56dfeea7 131 SUPERFAMILY SSF46955 13 88 3.11E-18 T 09-03-2017 IPR009061 Putative DNA-binding domain NA29_RS09380 7923462203793d66bc726a7e56dfeea7 131 Gene3D G3DSA:1.10.1660.10 12 83 2.8E-18 T 09-03-2017 NA29_RS09380 7923462203793d66bc726a7e56dfeea7 131 SMART SM00422 15 85 3.2E-7 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS09380 7923462203793d66bc726a7e56dfeea7 131 Pfam PF13411 MerR HTH family regulatory protein 15 83 9.5E-23 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 ProSitePatterns PS00450 Aconitase family signature 1. 340 356 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 Gene3D G3DSA:3.30.499.10 297 465 7.8E-61 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 PRINTS PR00415 Aconitase family signature 289 303 1.6E-41 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 PRINTS PR00415 Aconitase family signature 344 355 1.6E-41 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 PRINTS PR00415 Aconitase family signature 85 98 1.6E-41 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 PRINTS PR00415 Aconitase family signature 122 135 1.6E-41 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 PRINTS PR00415 Aconitase family signature 111 119 1.6E-41 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 PRINTS PR00415 Aconitase family signature 198 211 1.6E-41 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 PRINTS PR00415 Aconitase family signature 136 151 1.6E-41 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 PRINTS PR00415 Aconitase family signature 400 413 1.6E-41 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 PRINTS PR00415 Aconitase family signature 212 225 1.6E-41 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 Gene3D G3DSA:3.30.499.10 2 161 2.3E-24 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 SUPERFAMILY SSF53732 1 465 1.7E-147 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 7.4E-186 T 09-03-2017 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 ProSitePatterns PS01244 Aconitase family signature 2. 400 413 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 Pfam PF00330 Aconitase family (aconitate hydratase) 8 458 1.2E-133 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS19765 4cf7a899f16e0b0e837e8baa3f8d696b 470 Gene3D G3DSA:3.40.1060.10 169 283 6.0E-30 T 09-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS25115 1fdb847262eac178d766b9c5c170c513 299 SMART SM00470 41 131 7.6E-33 T 09-03-2017 IPR003115 ParB/Sulfiredoxin NA29_RS25115 1fdb847262eac178d766b9c5c170c513 299 Gene3D G3DSA:1.10.260.40 145 184 8.0E-4 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS25115 1fdb847262eac178d766b9c5c170c513 299 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 39 214 3.9E-58 T 09-03-2017 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 NA29_RS25115 1fdb847262eac178d766b9c5c170c513 299 SUPERFAMILY SSF110849 43 133 7.32E-29 T 09-03-2017 IPR003115 ParB/Sulfiredoxin NA29_RS25115 1fdb847262eac178d766b9c5c170c513 299 Gene3D G3DSA:3.90.1530.10 42 137 2.7E-38 T 09-03-2017 NA29_RS25115 1fdb847262eac178d766b9c5c170c513 299 SUPERFAMILY SSF109709 124 230 1.36E-34 T 09-03-2017 NA29_RS25115 1fdb847262eac178d766b9c5c170c513 299 Pfam PF02195 ParB-like nuclease domain 45 131 8.4E-27 T 09-03-2017 IPR003115 ParB/Sulfiredoxin NA29_RS12060 e3c61dee56867cbdb7afd486fc24b312 313 Gene3D G3DSA:3.40.50.620 167 310 7.0E-18 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS12060 e3c61dee56867cbdb7afd486fc24b312 313 Gene3D G3DSA:3.40.50.620 4 160 2.7E-21 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS12060 e3c61dee56867cbdb7afd486fc24b312 313 Pfam PF00582 Universal stress protein family 11 157 2.5E-12 T 09-03-2017 IPR006016 UspA GO:0006950 NA29_RS12060 e3c61dee56867cbdb7afd486fc24b312 313 Pfam PF00582 Universal stress protein family 169 309 2.6E-13 T 09-03-2017 IPR006016 UspA GO:0006950 NA29_RS12060 e3c61dee56867cbdb7afd486fc24b312 313 SUPERFAMILY SSF52402 10 158 4.88E-19 T 09-03-2017 NA29_RS12060 e3c61dee56867cbdb7afd486fc24b312 313 SUPERFAMILY SSF52402 167 309 1.0E-18 T 09-03-2017 NA29_RS12060 e3c61dee56867cbdb7afd486fc24b312 313 PRINTS PR01438 Universal stress protein signature 168 186 2.2E-7 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS12060 e3c61dee56867cbdb7afd486fc24b312 313 PRINTS PR01438 Universal stress protein signature 288 310 2.2E-7 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS12060 e3c61dee56867cbdb7afd486fc24b312 313 PRINTS PR01438 Universal stress protein signature 270 282 2.2E-7 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS22575 486e1e210d315f24aeed4a4e99b0f7b3 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 09-03-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 NA29_RS22575 486e1e210d315f24aeed4a4e99b0f7b3 400 Gene3D G3DSA:3.40.47.10 4 125 6.0E-66 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS22575 486e1e210d315f24aeed4a4e99b0f7b3 400 Gene3D G3DSA:3.40.47.10 200 281 6.0E-66 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS22575 486e1e210d315f24aeed4a4e99b0f7b3 400 SUPERFAMILY SSF53901 276 399 8.56E-45 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS22575 486e1e210d315f24aeed4a4e99b0f7b3 400 Pfam PF00108 Thiolase, N-terminal domain 5 268 6.4E-72 T 09-03-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 NA29_RS22575 486e1e210d315f24aeed4a4e99b0f7b3 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 1.0E-132 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS22575 486e1e210d315f24aeed4a4e99b0f7b3 400 Pfam PF02803 Thiolase, C-terminal domain 276 399 3.7E-42 T 09-03-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 NA29_RS22575 486e1e210d315f24aeed4a4e99b0f7b3 400 SUPERFAMILY SSF53901 4 275 4.1E-78 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS22575 486e1e210d315f24aeed4a4e99b0f7b3 400 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 400 1.3E-220 T 09-03-2017 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 NA29_RS22575 486e1e210d315f24aeed4a4e99b0f7b3 400 Gene3D G3DSA:3.40.47.10 154 199 3.1E-60 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS22575 486e1e210d315f24aeed4a4e99b0f7b3 400 Gene3D G3DSA:3.40.47.10 282 399 3.1E-60 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS22575 486e1e210d315f24aeed4a4e99b0f7b3 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 09-03-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 NA29_RS22575 486e1e210d315f24aeed4a4e99b0f7b3 400 PIRSF PIRSF000429 1 400 7.9E-126 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS22575 486e1e210d315f24aeed4a4e99b0f7b3 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 09-03-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 NA29_RS10760 35ef54dc536d4e4ec422052f802d4368 406 Pfam PF01270 Glycosyl hydrolases family 8 55 383 7.9E-62 T 09-03-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 NA29_RS10760 35ef54dc536d4e4ec422052f802d4368 406 Gene3D G3DSA:1.50.10.10 58 393 4.1E-83 T 09-03-2017 IPR012341 Six-hairpin glycosidase GO:0003824 NA29_RS10760 35ef54dc536d4e4ec422052f802d4368 406 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 145 163 - T 09-03-2017 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 NA29_RS10760 35ef54dc536d4e4ec422052f802d4368 406 SUPERFAMILY SSF48208 51 390 2.11E-90 T 09-03-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 NA29_RS10760 35ef54dc536d4e4ec422052f802d4368 406 PRINTS PR00735 Glycosyl hydrolase family 8 signature 275 284 7.5E-15 T 09-03-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 NA29_RS10760 35ef54dc536d4e4ec422052f802d4368 406 PRINTS PR00735 Glycosyl hydrolase family 8 signature 145 163 7.5E-15 T 09-03-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 NA29_RS10760 35ef54dc536d4e4ec422052f802d4368 406 PRINTS PR00735 Glycosyl hydrolase family 8 signature 250 261 7.5E-15 T 09-03-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 NA29_RS10760 35ef54dc536d4e4ec422052f802d4368 406 PRINTS PR00735 Glycosyl hydrolase family 8 signature 211 228 7.5E-15 T 09-03-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 NA29_RS10760 35ef54dc536d4e4ec422052f802d4368 406 PRINTS PR00735 Glycosyl hydrolase family 8 signature 370 384 7.5E-15 T 09-03-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 NA29_RS10760 35ef54dc536d4e4ec422052f802d4368 406 PRINTS PR00735 Glycosyl hydrolase family 8 signature 83 96 7.5E-15 T 09-03-2017 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 NA29_RS18545 95315bd8357b503f4d8bfa1f52e4eaed 58 PIRSF PIRSF036466 1 55 5.0E-22 T 09-03-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 NA29_RS18545 95315bd8357b503f4d8bfa1f52e4eaed 58 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 1.8E-14 T 09-03-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 NA29_RS18545 95315bd8357b503f4d8bfa1f52e4eaed 58 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 52 20.484 T 09-03-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 NA29_RS04880 7188cc6ded3b368955c1d4a3d339b659 165 ProSitePatterns PS00818 Dps protein family signature 1. 47 63 - T 09-03-2017 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 NA29_RS04880 7188cc6ded3b368955c1d4a3d339b659 165 SUPERFAMILY SSF47240 13 164 2.52E-48 T 09-03-2017 IPR009078 Ferritin-like superfamily NA29_RS04880 7188cc6ded3b368955c1d4a3d339b659 165 ProSitePatterns PS00819 Dps protein family signature 2. 73 87 - T 09-03-2017 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 NA29_RS04880 7188cc6ded3b368955c1d4a3d339b659 165 Pfam PF00210 Ferritin-like domain 27 164 4.8E-29 T 09-03-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 NA29_RS04880 7188cc6ded3b368955c1d4a3d339b659 165 PIRSF PIRSF005900 4 165 6.6E-48 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NA29_RS04880 7188cc6ded3b368955c1d4a3d339b659 165 Gene3D G3DSA:1.20.1260.10 4 164 4.4E-68 T 09-03-2017 IPR012347 Ferritin-related NA29_RS04880 7188cc6ded3b368955c1d4a3d339b659 165 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 47 63 2.6E-11 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NA29_RS04880 7188cc6ded3b368955c1d4a3d339b659 165 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 71 87 2.6E-11 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NA29_RS04880 7188cc6ded3b368955c1d4a3d339b659 165 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 142 160 2.6E-11 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NA29_RS09255 8bd845230c1a1ff8d7376fc2d56309ee 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 1.6E-9 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS09255 8bd845230c1a1ff8d7376fc2d56309ee 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 1.6E-9 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS09255 8bd845230c1a1ff8d7376fc2d56309ee 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 1.6E-9 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS09255 8bd845230c1a1ff8d7376fc2d56309ee 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 1.6E-9 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS09255 8bd845230c1a1ff8d7376fc2d56309ee 271 Pfam PF01738 Dienelactone hydrolase family 199 259 4.1E-5 T 09-03-2017 IPR002925 Dienelactone hydrolase GO:0016787 NA29_RS09255 8bd845230c1a1ff8d7376fc2d56309ee 271 SUPERFAMILY SSF53474 5 270 1.47E-53 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS09255 8bd845230c1a1ff8d7376fc2d56309ee 271 Pfam PF00561 alpha/beta hydrolase fold 24 134 2.1E-20 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS09255 8bd845230c1a1ff8d7376fc2d56309ee 271 Gene3D G3DSA:3.40.50.1820 5 270 5.3E-53 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS02155 cc313e1ad0a7397a7bbb0e9d114a0479 328 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 6.9E-37 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS02155 cc313e1ad0a7397a7bbb0e9d114a0479 328 Gene3D G3DSA:3.90.850.10 67 307 7.4E-39 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS02155 cc313e1ad0a7397a7bbb0e9d114a0479 328 SUPERFAMILY SSF56529 77 325 2.09E-58 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS14295 4890ffc12f09d719901d75874d61acee 313 SUPERFAMILY SSF52768 4 288 5.76E-80 T 09-03-2017 NA29_RS14295 4890ffc12f09d719901d75874d61acee 313 Gene3D G3DSA:3.40.800.20 3 289 1.3E-64 T 09-03-2017 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 NA29_RS14295 4890ffc12f09d719901d75874d61acee 313 PRINTS PR01270 Histone deacetylase superfamily signature 222 232 3.9E-14 T 09-03-2017 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 NA29_RS14295 4890ffc12f09d719901d75874d61acee 313 PRINTS PR01270 Histone deacetylase superfamily signature 113 136 3.9E-14 T 09-03-2017 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 NA29_RS14295 4890ffc12f09d719901d75874d61acee 313 PRINTS PR01270 Histone deacetylase superfamily signature 148 163 3.9E-14 T 09-03-2017 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 NA29_RS14295 4890ffc12f09d719901d75874d61acee 313 Pfam PF00850 Histone deacetylase domain 29 285 4.9E-53 T 09-03-2017 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 NA29_RS08960 dd96e82f9de5a7435413631920f0da61 601 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 597 36.505 T 09-03-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 NA29_RS08960 dd96e82f9de5a7435413631920f0da61 601 PIRSF PIRSF001294 1 599 2.4E-245 T 09-03-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 NA29_RS08960 dd96e82f9de5a7435413631920f0da61 601 Pfam PF03814 Potassium-transporting ATPase A subunit 11 595 3.6E-248 T 09-03-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 NA29_RS08960 dd96e82f9de5a7435413631920f0da61 601 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 239 596 2.4E-165 T 09-03-2017 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 NA29_RS10480 60e01b98fb14ed01b3727eb6c431b7a6 279 Pfam PF05742 Transport and Golgi organisation 2 1 257 1.4E-59 T 09-03-2017 IPR008551 Transport and Golgi organisation protein 2 NA29_RS07710 68fe67550260de226dd44ea9d8c46b5c 361 Gene3D G3DSA:3.30.70.100 249 336 1.5E-9 T 09-03-2017 NA29_RS07710 68fe67550260de226dd44ea9d8c46b5c 361 SUPERFAMILY SSF82861 96 179 2.62E-12 T 09-03-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 NA29_RS07710 68fe67550260de226dd44ea9d8c46b5c 361 Gene3D G3DSA:2.30.30.60 196 245 6.8E-15 T 09-03-2017 NA29_RS07710 68fe67550260de226dd44ea9d8c46b5c 361 Pfam PF00924 Mechanosensitive ion channel 139 338 1.2E-49 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 NA29_RS07710 68fe67550260de226dd44ea9d8c46b5c 361 SUPERFAMILY SSF82689 247 347 4.45E-14 T 09-03-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 NA29_RS07710 68fe67550260de226dd44ea9d8c46b5c 361 SUPERFAMILY SSF50182 180 245 7.19E-13 T 09-03-2017 IPR010920 LSM domain NA29_RS08750 11dd7dd29e6813ce2c05e4c3dbb9fadc 247 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 246 3.1E-8 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS08750 11dd7dd29e6813ce2c05e4c3dbb9fadc 247 Gene3D G3DSA:3.40.50.300 5 243 1.2E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08750 11dd7dd29e6813ce2c05e4c3dbb9fadc 247 Pfam PF00005 ABC transporter 24 177 1.1E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS08750 11dd7dd29e6813ce2c05e4c3dbb9fadc 247 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 7 247 1.8E-109 T 09-03-2017 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD NA29_RS08750 11dd7dd29e6813ce2c05e4c3dbb9fadc 247 SUPERFAMILY SSF52540 6 245 1.71E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS16535 9eb6ee274956f69f6726d578d5e10265 562 TIGRFAM TIGR03802 Asp_Ala_antiprt: aspartate-alanine antiporter 7 556 3.8E-183 T 09-03-2017 IPR022457 Aspartate-alanine antiporter GO:0005215|GO:0016020 NA29_RS16535 9eb6ee274956f69f6726d578d5e10265 562 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 390 541 2.1E-30 T 09-03-2017 IPR006512 YidE/YbjL duplication NA29_RS16535 9eb6ee274956f69f6726d578d5e10265 562 Gene3D G3DSA:3.30.70.1450 303 371 2.6E-4 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NA29_RS16535 9eb6ee274956f69f6726d578d5e10265 562 Pfam PF06826 Predicted Permease Membrane Region 16 181 3.8E-27 T 09-03-2017 IPR006512 YidE/YbjL duplication NA29_RS16535 9eb6ee274956f69f6726d578d5e10265 562 Pfam PF06826 Predicted Permease Membrane Region 386 551 1.1E-32 T 09-03-2017 IPR006512 YidE/YbjL duplication NA29_RS21875 f7e75d4ff3f765b87dc7a1d69a8ed967 514 Pfam PF04293 SpoVR like protein 9 449 4.1E-174 T 09-03-2017 IPR007390 Sporulation stage V, protein R NA29_RS16380 ffb59be18fd27dcc54321cc3380ceaa0 408 Gene3D G3DSA:3.40.50.10540 307 398 4.4E-117 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS16380 ffb59be18fd27dcc54321cc3380ceaa0 408 Gene3D G3DSA:3.40.50.10540 3 218 4.4E-117 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS16380 ffb59be18fd27dcc54321cc3380ceaa0 408 SUPERFAMILY SSF89796 6 397 4.45E-141 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS16380 ffb59be18fd27dcc54321cc3380ceaa0 408 Gene3D G3DSA:3.30.1540.10 224 306 3.4E-30 T 09-03-2017 NA29_RS16380 ffb59be18fd27dcc54321cc3380ceaa0 408 Pfam PF02515 CoA-transferase family III 8 374 3.1E-132 T 09-03-2017 IPR003673 CoA-transferase family III GO:0003824 NA29_RS23375 3b1c6b9068b2a35df2dba1612656dd76 342 SUPERFAMILY SSF56349 69 333 1.18E-43 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NA29_RS23375 3b1c6b9068b2a35df2dba1612656dd76 342 Gene3D G3DSA:1.10.443.10 178 333 5.7E-29 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS23375 3b1c6b9068b2a35df2dba1612656dd76 342 Pfam PF00589 Phage integrase family 179 333 1.9E-10 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS23375 3b1c6b9068b2a35df2dba1612656dd76 342 Gene3D G3DSA:1.10.150.130 71 168 1.3E-9 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal NA29_RS03960 706fdb876ad866579f628c77556cded6 469 PIRSF PIRSF006060 1 466 7.3E-72 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NA29_RS03960 706fdb876ad866579f628c77556cded6 469 Pfam PF00324 Amino acid permease 18 434 1.6E-104 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 NA29_RS03960 706fdb876ad866579f628c77556cded6 469 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 NA29_RS00590 051dbf4531c801fe863847c93280431c 340 Gene3D G3DSA:3.75.10.10 1 338 4.1E-102 T 09-03-2017 NA29_RS00590 051dbf4531c801fe863847c93280431c 340 SUPERFAMILY SSF55909 1 336 2.86E-94 T 09-03-2017 NA29_RS00590 051dbf4531c801fe863847c93280431c 340 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 1 335 1.7E-93 T 09-03-2017 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 NA29_RS20485 8b43a9e4c10a3d58b26614da5c46bfc5 279 Pfam PF03239 Iron permease FTR1 family 3 265 1.6E-26 T 09-03-2017 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 388 397 - T 09-03-2017 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 PRINTS PR00359 B-class P450 signature 130 141 6.6E-33 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 PRINTS PR00359 B-class P450 signature 364 379 6.6E-33 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 PRINTS PR00359 B-class P450 signature 386 395 6.6E-33 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 PRINTS PR00359 B-class P450 signature 176 192 6.6E-33 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 PRINTS PR00359 B-class P450 signature 193 208 6.6E-33 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 PRINTS PR00359 B-class P450 signature 395 406 6.6E-33 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 PRINTS PR00359 B-class P450 signature 319 330 6.6E-33 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 PRINTS PR00359 B-class P450 signature 336 363 6.6E-33 T 09-03-2017 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 SUPERFAMILY SSF54292 679 788 2.49E-26 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 Gene3D G3DSA:1.10.630.10 30 448 6.5E-108 T 09-03-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 SUPERFAMILY SSF63380 475 571 3.2E-26 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 Pfam PF00067 Cytochrome P450 261 416 1.6E-19 T 09-03-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 Pfam PF00970 Oxidoreductase FAD-binding domain 479 573 1.8E-4 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 Gene3D G3DSA:3.10.20.30 685 786 3.4E-26 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 SUPERFAMILY SSF52343 572 687 8.12E-25 T 09-03-2017 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 SUPERFAMILY SSF48264 46 446 1.44E-85 T 09-03-2017 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 Gene3D G3DSA:2.40.30.10 472 572 1.4E-32 T 09-03-2017 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 Gene3D G3DSA:3.40.50.80 574 684 1.8E-22 T 09-03-2017 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 738 746 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NA29_RS08090 f563fb8ff0483ba8f8d01b6bce11a8d3 789 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 707 780 2.8E-13 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS21010 4023d82ab1c48a83d63eea022938bae5 375 Pfam PF06463 Molybdenum Cofactor Synthesis C 225 351 8.9E-37 T 09-03-2017 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS21010 4023d82ab1c48a83d63eea022938bae5 375 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 50 61 - T 09-03-2017 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS21010 4023d82ab1c48a83d63eea022938bae5 375 Pfam PF13394 4Fe-4S single cluster domain 51 143 3.7E-9 T 09-03-2017 NA29_RS21010 4023d82ab1c48a83d63eea022938bae5 375 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 35 375 40.394 T 09-03-2017 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS21010 4023d82ab1c48a83d63eea022938bae5 375 SMART SM00729 44 258 3.0E-8 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NA29_RS21010 4023d82ab1c48a83d63eea022938bae5 375 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 35 375 2.7E-116 T 09-03-2017 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS21010 4023d82ab1c48a83d63eea022938bae5 375 Pfam PF04055 Radical SAM superfamily 48 217 1.3E-28 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 NA29_RS21010 4023d82ab1c48a83d63eea022938bae5 375 Gene3D G3DSA:3.20.20.70 35 339 5.1E-77 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS21010 4023d82ab1c48a83d63eea022938bae5 375 SUPERFAMILY SSF102114 37 332 1.96E-74 T 09-03-2017 NA29_RS23050 0fc3395a43b139e2cd9b9577925255f8 284 Pfam PF01380 SIS domain 133 218 2.1E-7 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 NA29_RS23050 0fc3395a43b139e2cd9b9577925255f8 284 SUPERFAMILY SSF53697 107 262 3.34E-9 T 09-03-2017 NA29_RS23050 0fc3395a43b139e2cd9b9577925255f8 284 Gene3D G3DSA:1.10.10.10 7 81 9.1E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS23050 0fc3395a43b139e2cd9b9577925255f8 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 12 79 1.1E-12 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 NA29_RS23050 0fc3395a43b139e2cd9b9577925255f8 284 Gene3D G3DSA:3.40.50.10490 113 192 3.9E-10 T 09-03-2017 NA29_RS23050 0fc3395a43b139e2cd9b9577925255f8 284 SUPERFAMILY SSF46689 7 82 1.97E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS22435 71ea1c8a69cbeda9ede2118926ae42e0 277 Pfam PF03799 Cell division protein FtsQ 110 229 6.1E-23 T 09-03-2017 IPR005548 Cell division protein FtsQ/DivIB NA29_RS22435 71ea1c8a69cbeda9ede2118926ae42e0 277 Pfam PF08478 POTRA domain, FtsQ-type 37 106 1.4E-15 T 09-03-2017 IPR013685 Polypeptide-transport-associated, FtsQ-type NA29_RS22435 71ea1c8a69cbeda9ede2118926ae42e0 277 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 7 237 23.853 T 09-03-2017 IPR026579 Cell division protein FtsQ GO:0090529 NA29_RS17460 13e726a9dbff50cfb49019d4ff23127b 112 Gene3D G3DSA:3.30.70.120 1 112 2.0E-49 T 09-03-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal NA29_RS17460 13e726a9dbff50cfb49019d4ff23127b 112 PIRSF PIRSF039144 1 112 1.7E-55 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NA29_RS17460 13e726a9dbff50cfb49019d4ff23127b 112 SUPERFAMILY SSF54913 1 112 1.37E-45 T 09-03-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta NA29_RS17460 13e726a9dbff50cfb49019d4ff23127b 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 09-03-2017 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 NA29_RS17460 13e726a9dbff50cfb49019d4ff23127b 112 PRINTS PR00340 P-II protein signature 83 103 4.7E-43 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NA29_RS17460 13e726a9dbff50cfb49019d4ff23127b 112 PRINTS PR00340 P-II protein signature 23 41 4.7E-43 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NA29_RS17460 13e726a9dbff50cfb49019d4ff23127b 112 PRINTS PR00340 P-II protein signature 2 17 4.7E-43 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NA29_RS17460 13e726a9dbff50cfb49019d4ff23127b 112 PRINTS PR00340 P-II protein signature 52 75 4.7E-43 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NA29_RS17460 13e726a9dbff50cfb49019d4ff23127b 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 09-03-2017 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 NA29_RS17460 13e726a9dbff50cfb49019d4ff23127b 112 SMART SM00938 4 105 2.0E-65 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NA29_RS17460 13e726a9dbff50cfb49019d4ff23127b 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.8E-43 T 09-03-2017 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 NA29_RS18700 21503b901125f74afe4cf13ca6f6b638 251 Gene3D G3DSA:3.90.470.20 26 130 1.7E-18 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 NA29_RS18700 21503b901125f74afe4cf13ca6f6b638 251 Gene3D G3DSA:3.90.470.20 131 200 2.2E-4 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 NA29_RS18700 21503b901125f74afe4cf13ca6f6b638 251 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 125 197 1.9E-5 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 NA29_RS18700 21503b901125f74afe4cf13ca6f6b638 251 SUPERFAMILY SSF56214 125 220 2.22E-8 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 NA29_RS18700 21503b901125f74afe4cf13ca6f6b638 251 SUPERFAMILY SSF56214 27 118 3.66E-14 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 NA29_RS18555 b5123e2ca900dea4985668486369b000 68 PIRSF PIRSF039008 1 66 2.1E-30 T 09-03-2017 IPR026042 Stress response protein YjbJ NA29_RS18555 b5123e2ca900dea4985668486369b000 68 Gene3D G3DSA:1.10.1470.10 1 66 1.4E-28 T 09-03-2017 IPR008462 CsbD-like NA29_RS18555 b5123e2ca900dea4985668486369b000 68 SUPERFAMILY SSF69047 1 66 1.02E-24 T 09-03-2017 IPR008462 CsbD-like NA29_RS18555 b5123e2ca900dea4985668486369b000 68 Pfam PF05532 CsbD-like 6 56 9.4E-20 T 09-03-2017 IPR008462 CsbD-like NA29_RS12265 cf6842c3453c750220cd354b5f2a66ae 111 Gene3D G3DSA:1.10.10.10 7 98 2.1E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12265 cf6842c3453c750220cd354b5f2a66ae 111 Pfam PF12840 Helix-turn-helix domain 13 73 3.3E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12265 cf6842c3453c750220cd354b5f2a66ae 111 SUPERFAMILY SSF46785 6 96 2.25E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12265 cf6842c3453c750220cd354b5f2a66ae 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 8.4E-10 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS12265 cf6842c3453c750220cd354b5f2a66ae 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 8.4E-10 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS12265 cf6842c3453c750220cd354b5f2a66ae 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 14 29 8.4E-10 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS12265 cf6842c3453c750220cd354b5f2a66ae 111 SMART SM00418 12 93 1.6E-15 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS16850 3753ab9072a2d7a9e1328701a38bfc57 57 Pfam PF01066 CDP-alcohol phosphatidyltransferase 17 54 6.8E-6 T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NA29_RS11965 1e4dbc9ea5e0f46250bb69e2b999d7e1 97 Gene3D G3DSA:3.30.160.140 2 71 1.5E-10 T 09-03-2017 IPR009962 Protein of unknown function DUF1488 NA29_RS11965 1e4dbc9ea5e0f46250bb69e2b999d7e1 97 SUPERFAMILY SSF160272 4 79 3.01E-15 T 09-03-2017 IPR009962 Protein of unknown function DUF1488 NA29_RS11965 1e4dbc9ea5e0f46250bb69e2b999d7e1 97 Pfam PF07369 Protein of unknown function (DUF1488) 3 78 3.7E-20 T 09-03-2017 IPR009962 Protein of unknown function DUF1488 NA29_RS22170 909a0eda56cc33d8f8669dcd98ab7d0e 291 Gene3D G3DSA:2.30.30.60 128 178 9.7E-17 T 09-03-2017 NA29_RS22170 909a0eda56cc33d8f8669dcd98ab7d0e 291 SUPERFAMILY SSF82861 26 111 1.96E-18 T 09-03-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 NA29_RS22170 909a0eda56cc33d8f8669dcd98ab7d0e 291 SUPERFAMILY SSF50182 113 179 6.54E-17 T 09-03-2017 IPR010920 LSM domain NA29_RS22170 909a0eda56cc33d8f8669dcd98ab7d0e 291 Pfam PF00924 Mechanosensitive ion channel 75 262 4.0E-49 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 NA29_RS22170 909a0eda56cc33d8f8669dcd98ab7d0e 291 Gene3D G3DSA:3.30.70.100 182 262 1.1E-19 T 09-03-2017 NA29_RS22170 909a0eda56cc33d8f8669dcd98ab7d0e 291 SUPERFAMILY SSF82689 180 276 6.15E-22 T 09-03-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 NA29_RS20000 9a8416362940b6e75635256757072bdf 312 Gene3D G3DSA:3.40.190.10 173 281 1.3E-25 T 09-03-2017 NA29_RS20000 9a8416362940b6e75635256757072bdf 312 Gene3D G3DSA:3.40.190.10 90 172 3.8E-34 T 09-03-2017 NA29_RS20000 9a8416362940b6e75635256757072bdf 312 Gene3D G3DSA:3.40.190.10 285 312 3.8E-34 T 09-03-2017 NA29_RS20000 9a8416362940b6e75635256757072bdf 312 Gene3D G3DSA:1.10.10.10 1 85 7.3E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20000 9a8416362940b6e75635256757072bdf 312 SUPERFAMILY SSF46785 3 85 1.49E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20000 9a8416362940b6e75635256757072bdf 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.6E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS20000 9a8416362940b6e75635256757072bdf 312 SUPERFAMILY SSF53850 90 309 1.3E-40 T 09-03-2017 NA29_RS20000 9a8416362940b6e75635256757072bdf 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS20000 9a8416362940b6e75635256757072bdf 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS20000 9a8416362940b6e75635256757072bdf 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS20000 9a8416362940b6e75635256757072bdf 312 Pfam PF03466 LysR substrate binding domain 96 308 4.2E-26 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS22715 fc66976fb958b8b70e9b8d0e27c58c98 199 SUPERFAMILY SSF52218 1 199 1.26E-54 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS22715 fc66976fb958b8b70e9b8d0e27c58c98 199 Gene3D G3DSA:3.40.50.360 1 199 7.3E-66 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS22715 fc66976fb958b8b70e9b8d0e27c58c98 199 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 29.921 T 09-03-2017 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 NA29_RS22715 fc66976fb958b8b70e9b8d0e27c58c98 199 Pfam PF02525 Flavodoxin-like fold 3 198 2.8E-44 T 09-03-2017 IPR003680 Flavodoxin-like fold NA29_RS10220 06ad24c20461ca559bba14c2d3574cd0 341 Pfam PF03466 LysR substrate binding domain 87 292 1.0E-41 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS10220 06ad24c20461ca559bba14c2d3574cd0 341 Gene3D G3DSA:1.10.10.10 3 87 1.2E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10220 06ad24c20461ca559bba14c2d3574cd0 341 Gene3D G3DSA:3.40.190.10 92 192 1.7E-24 T 09-03-2017 NA29_RS10220 06ad24c20461ca559bba14c2d3574cd0 341 SUPERFAMILY SSF46785 4 87 1.41E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10220 06ad24c20461ca559bba14c2d3574cd0 341 SUPERFAMILY SSF53850 90 297 3.98E-44 T 09-03-2017 NA29_RS10220 06ad24c20461ca559bba14c2d3574cd0 341 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.3E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS17360 11b95f2e8354f544827f2d598a9df4c2 226 Gene3D G3DSA:3.50.30.40 13 185 9.9E-42 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NA29_RS17360 11b95f2e8354f544827f2d598a9df4c2 226 SUPERFAMILY SSF89562 13 186 2.62E-39 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NA29_RS17360 11b95f2e8354f544827f2d598a9df4c2 226 Pfam PF03737 Demethylmenaquinone methyltransferase 17 175 4.1E-33 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NA29_RS21995 5e3b46a8390148631ef3f05e72c066c7 343 SUPERFAMILY SSF56112 9 330 4.81E-49 T 09-03-2017 IPR011009 Protein kinase-like domain NA29_RS21995 5e3b46a8390148631ef3f05e72c066c7 343 Pfam PF01636 Phosphotransferase enzyme family 31 254 1.4E-26 T 09-03-2017 IPR002575 Aminoglycoside phosphotransferase NA29_RS21995 5e3b46a8390148631ef3f05e72c066c7 343 Gene3D G3DSA:3.30.200.20 5 100 6.9E-32 T 09-03-2017 NA29_RS21995 5e3b46a8390148631ef3f05e72c066c7 343 Gene3D G3DSA:3.90.1200.10 101 334 9.7E-74 T 09-03-2017 NA29_RS18140 e4933779ea47aaed155ea2278685a8d9 451 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 38 5.2E-5 T 09-03-2017 NA29_RS18140 e4933779ea47aaed155ea2278685a8d9 451 Pfam PF01494 FAD binding domain 354 422 2.5E-10 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 NA29_RS18140 e4933779ea47aaed155ea2278685a8d9 451 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 372 388 1.1E-13 T 09-03-2017 NA29_RS18140 e4933779ea47aaed155ea2278685a8d9 451 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.1E-13 T 09-03-2017 NA29_RS18140 e4933779ea47aaed155ea2278685a8d9 451 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 357 372 1.1E-13 T 09-03-2017 NA29_RS18140 e4933779ea47aaed155ea2278685a8d9 451 Gene3D G3DSA:3.40.50.720 78 112 3.1E-5 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18140 e4933779ea47aaed155ea2278685a8d9 451 SUPERFAMILY SSF51905 104 200 2.74E-38 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18140 e4933779ea47aaed155ea2278685a8d9 451 SUPERFAMILY SSF51905 353 432 2.74E-38 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18140 e4933779ea47aaed155ea2278685a8d9 451 SUPERFAMILY SSF51905 6 77 2.74E-38 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18140 e4933779ea47aaed155ea2278685a8d9 451 Gene3D G3DSA:3.50.50.60 128 205 7.4E-29 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18140 e4933779ea47aaed155ea2278685a8d9 451 Gene3D G3DSA:3.50.50.60 345 425 7.4E-29 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18140 e4933779ea47aaed155ea2278685a8d9 451 Gene3D G3DSA:3.50.50.60 6 74 7.4E-29 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS02235 97ee80ef0326fb03bfa20e0074f0c838 287 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS02235 97ee80ef0326fb03bfa20e0074f0c838 287 SMART SM00382 47 236 5.8E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS02235 97ee80ef0326fb03bfa20e0074f0c838 287 SUPERFAMILY SSF52540 21 251 3.69E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02235 97ee80ef0326fb03bfa20e0074f0c838 287 Gene3D G3DSA:3.40.50.300 21 249 3.5E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02235 97ee80ef0326fb03bfa20e0074f0c838 287 Pfam PF00005 ABC transporter 40 188 6.4E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS12785 2b4577962e28a2946feece5de0e61c20 727 Gene3D G3DSA:2.40.170.20 202 727 5.9E-97 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS12785 2b4577962e28a2946feece5de0e61c20 727 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 88 727 6.1E-86 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NA29_RS12785 2b4577962e28a2946feece5de0e61c20 727 SUPERFAMILY SSF56935 50 727 2.83E-103 T 09-03-2017 NA29_RS12785 2b4577962e28a2946feece5de0e61c20 727 Pfam PF00593 TonB dependent receptor 493 725 6.2E-19 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS12785 2b4577962e28a2946feece5de0e61c20 727 Gene3D G3DSA:2.170.130.10 51 198 2.5E-25 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS12785 2b4577962e28a2946feece5de0e61c20 727 Pfam PF07715 TonB-dependent Receptor Plug Domain 88 187 6.2E-12 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS01945 1e9b160ce47503dd29a690a03946f80b 127 Gene3D G3DSA:1.10.260.40 7 72 2.9E-16 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS01945 1e9b160ce47503dd29a690a03946f80b 127 SMART SM00530 11 66 3.3E-10 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS01945 1e9b160ce47503dd29a690a03946f80b 127 Pfam PF01381 Helix-turn-helix 15 66 1.7E-12 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS01945 1e9b160ce47503dd29a690a03946f80b 127 SUPERFAMILY SSF47413 3 71 4.56E-15 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS24420 3765f06fc0001a7440f345422bd0116f 190 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 187 33.233 T 09-03-2017 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 NA29_RS24420 3765f06fc0001a7440f345422bd0116f 190 SUPERFAMILY SSF53697 16 188 8.29E-48 T 09-03-2017 NA29_RS24420 3765f06fc0001a7440f345422bd0116f 190 Pfam PF13580 SIS domain 7 143 1.2E-28 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 NA29_RS24420 3765f06fc0001a7440f345422bd0116f 190 Gene3D G3DSA:3.40.50.10490 15 188 1.4E-54 T 09-03-2017 NA29_RS21980 36c1dcc0fd84dcf52619dd825e93abb5 368 Gene3D G3DSA:3.40.718.10 3 342 3.4E-127 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 NA29_RS21980 36c1dcc0fd84dcf52619dd825e93abb5 368 SUPERFAMILY SSF53659 8 342 1.75E-101 T 09-03-2017 NA29_RS21980 36c1dcc0fd84dcf52619dd825e93abb5 368 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 54 336 7.3E-107 T 09-03-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS21980 36c1dcc0fd84dcf52619dd825e93abb5 368 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 340 35.706 T 09-03-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS21980 36c1dcc0fd84dcf52619dd825e93abb5 368 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 9 340 1.7E-120 T 09-03-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS14435 22684990fd35218d93fb1fcf03f9de71 493 Gene3D G3DSA:2.40.50.140 2 82 2.2E-22 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS14435 22684990fd35218d93fb1fcf03f9de71 493 SUPERFAMILY SSF53335 70 446 2.45E-77 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS14435 22684990fd35218d93fb1fcf03f9de71 493 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 98 444 1.5E-17 T 09-03-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 NA29_RS14435 22684990fd35218d93fb1fcf03f9de71 493 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 31 440 2.1E-82 T 09-03-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 NA29_RS14435 22684990fd35218d93fb1fcf03f9de71 493 SUPERFAMILY SSF50249 2 69 3.2E-7 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS14435 22684990fd35218d93fb1fcf03f9de71 493 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 430 440 - T 09-03-2017 IPR030391 RNA methyltransferase TrmA, conserved site NA29_RS14435 22684990fd35218d93fb1fcf03f9de71 493 Gene3D G3DSA:3.40.50.150 246 446 7.5E-52 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS14435 22684990fd35218d93fb1fcf03f9de71 493 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 1 448 67.833 T 09-03-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 NA29_RS06205 b06a41ee56686a59600fc4a70b95e458 240 Gene3D G3DSA:1.10.10.60 136 194 7.3E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS06205 b06a41ee56686a59600fc4a70b95e458 240 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 194 235 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS06205 b06a41ee56686a59600fc4a70b95e458 240 SMART SM00342 157 239 4.1E-23 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS06205 b06a41ee56686a59600fc4a70b95e458 240 Pfam PF12833 Helix-turn-helix domain 163 238 2.5E-23 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS06205 b06a41ee56686a59600fc4a70b95e458 240 SUPERFAMILY SSF46689 194 239 8.07E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS06205 b06a41ee56686a59600fc4a70b95e458 240 Gene3D G3DSA:2.60.120.10 3 77 1.3E-8 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS06205 b06a41ee56686a59600fc4a70b95e458 240 SUPERFAMILY SSF51182 3 173 1.78E-17 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS06205 b06a41ee56686a59600fc4a70b95e458 240 Gene3D G3DSA:1.10.10.60 195 238 1.9E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS06205 b06a41ee56686a59600fc4a70b95e458 240 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 239 2.3E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS06205 b06a41ee56686a59600fc4a70b95e458 240 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 208 223 2.3E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS25070 b2ac0e4b2744ddb04256c6b11e4d607f 463 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 7 462 1.5E-250 T 09-03-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 NA29_RS25070 b2ac0e4b2744ddb04256c6b11e4d607f 463 SUPERFAMILY SSF47917 347 463 1.96E-54 T 09-03-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS25070 b2ac0e4b2744ddb04256c6b11e4d607f 463 SMART SM00382 144 407 5.3E-4 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS25070 b2ac0e4b2744ddb04256c6b11e4d607f 463 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 344 4.0E-65 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS25070 b2ac0e4b2744ddb04256c6b11e4d607f 463 Gene3D G3DSA:3.40.50.300 79 345 1.3E-109 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25070 b2ac0e4b2744ddb04256c6b11e4d607f 463 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 10 75 1.1E-18 T 09-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS25070 b2ac0e4b2744ddb04256c6b11e4d607f 463 SUPERFAMILY SSF52540 79 349 4.94E-92 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25070 b2ac0e4b2744ddb04256c6b11e4d607f 463 Gene3D G3DSA:2.40.10.170 6 76 6.2E-27 T 09-03-2017 NA29_RS25070 b2ac0e4b2744ddb04256c6b11e4d607f 463 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 335 344 - T 09-03-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS25070 b2ac0e4b2744ddb04256c6b11e4d607f 463 Hamap MF_01347 ATP synthase subunit beta [atpB]. 5 462 57.044 T 09-03-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 NA29_RS25070 b2ac0e4b2744ddb04256c6b11e4d607f 463 Gene3D G3DSA:1.10.1140.10 348 463 3.2E-56 T 09-03-2017 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS25070 b2ac0e4b2744ddb04256c6b11e4d607f 463 SUPERFAMILY SSF50615 7 77 3.92E-23 T 09-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS04845 297ac447fca2e954b4fe9274f643110e 108 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 100 2.4E-29 T 09-03-2017 IPR003849 Preprotein translocase YajC NA29_RS04845 297ac447fca2e954b4fe9274f643110e 108 SMART SM01323 18 100 8.3E-47 T 09-03-2017 IPR003849 Preprotein translocase YajC NA29_RS04845 297ac447fca2e954b4fe9274f643110e 108 Pfam PF02699 Preprotein translocase subunit 21 97 8.0E-31 T 09-03-2017 IPR003849 Preprotein translocase YajC NA29_RS04845 297ac447fca2e954b4fe9274f643110e 108 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 5.1E-17 T 09-03-2017 IPR003849 Preprotein translocase YajC NA29_RS04845 297ac447fca2e954b4fe9274f643110e 108 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 5.1E-17 T 09-03-2017 IPR003849 Preprotein translocase YajC NA29_RS16530 cd3d31de02e61e2e69f133bee3073a3f 561 Gene3D G3DSA:3.30.70.1450 313 375 8.5E-5 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NA29_RS16530 cd3d31de02e61e2e69f133bee3073a3f 561 Gene3D G3DSA:3.30.70.1450 229 286 7.8E-6 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NA29_RS16530 cd3d31de02e61e2e69f133bee3073a3f 561 SUPERFAMILY SSF116726 311 375 2.88E-6 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NA29_RS16530 cd3d31de02e61e2e69f133bee3073a3f 561 Pfam PF02080 TrkA-C domain 314 374 1.6E-7 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NA29_RS16530 cd3d31de02e61e2e69f133bee3073a3f 561 Pfam PF02080 TrkA-C domain 229 280 7.3E-7 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NA29_RS16530 cd3d31de02e61e2e69f133bee3073a3f 561 Pfam PF06826 Predicted Permease Membrane Region 15 180 4.6E-35 T 09-03-2017 IPR006512 YidE/YbjL duplication NA29_RS16530 cd3d31de02e61e2e69f133bee3073a3f 561 Pfam PF06826 Predicted Permease Membrane Region 390 557 5.9E-37 T 09-03-2017 IPR006512 YidE/YbjL duplication NA29_RS16530 cd3d31de02e61e2e69f133bee3073a3f 561 SUPERFAMILY SSF116726 229 287 1.18E-8 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 NA29_RS16530 cd3d31de02e61e2e69f133bee3073a3f 561 TIGRFAM TIGR03802 Asp_Ala_antiprt: aspartate-alanine antiporter 2 560 1.6E-222 T 09-03-2017 IPR022457 Aspartate-alanine antiporter GO:0005215|GO:0016020 NA29_RS16530 cd3d31de02e61e2e69f133bee3073a3f 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 545 2.6E-27 T 09-03-2017 IPR006512 YidE/YbjL duplication NA29_RS14320 32f3fea98ccacc60fc93c2652dd89106 895 SUPERFAMILY SSF52922 707 894 8.79E-60 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NA29_RS14320 32f3fea98ccacc60fc93c2652dd89106 895 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 14 894 0.0 T 09-03-2017 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 NA29_RS14320 32f3fea98ccacc60fc93c2652dd89106 895 PIRSF PIRSF000156 5 895 0.0 T 09-03-2017 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 NA29_RS14320 32f3fea98ccacc60fc93c2652dd89106 895 Gene3D G3DSA:3.40.50.970 477 710 7.4E-120 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS14320 32f3fea98ccacc60fc93c2652dd89106 895 Gene3D G3DSA:3.40.50.970 65 473 1.6E-154 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS14320 32f3fea98ccacc60fc93c2652dd89106 895 Gene3D G3DSA:3.40.50.920 713 894 2.9E-74 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NA29_RS14320 32f3fea98ccacc60fc93c2652dd89106 895 SUPERFAMILY SSF52518 478 706 1.13E-97 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS14320 32f3fea98ccacc60fc93c2652dd89106 895 SUPERFAMILY SSF52518 65 473 1.18E-136 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS14320 32f3fea98ccacc60fc93c2652dd89106 895 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 111 302 7.3E-10 T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 NA29_RS01065 9842218b3c95536a17f6fa21c374c9c0 283 SUPERFAMILY SSF54506 3 282 1.57E-55 T 09-03-2017 NA29_RS01065 9842218b3c95536a17f6fa21c374c9c0 283 Gene3D G3DSA:3.10.310.10 121 271 5.2E-50 T 09-03-2017 NA29_RS01065 9842218b3c95536a17f6fa21c374c9c0 283 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 09-03-2017 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 NA29_RS01065 9842218b3c95536a17f6fa21c374c9c0 283 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 283 38.53 T 09-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 NA29_RS01065 9842218b3c95536a17f6fa21c374c9c0 283 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 281 3.5E-88 T 09-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 NA29_RS01065 9842218b3c95536a17f6fa21c374c9c0 283 Gene3D G3DSA:3.10.310.10 1 120 3.7E-56 T 09-03-2017 NA29_RS01065 9842218b3c95536a17f6fa21c374c9c0 283 Pfam PF01678 Diaminopimelate epimerase 5 124 6.6E-34 T 09-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 NA29_RS01065 9842218b3c95536a17f6fa21c374c9c0 283 Pfam PF01678 Diaminopimelate epimerase 161 275 3.3E-28 T 09-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 NA29_RS00220 6806f23578a5462421f862989e627f63 417 Gene3D G3DSA:3.90.1150.10 283 414 2.4E-33 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS00220 6806f23578a5462421f862989e627f63 417 Gene3D G3DSA:3.40.640.10 31 282 4.5E-73 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS00220 6806f23578a5462421f862989e627f63 417 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 33 413 3.6E-118 T 09-03-2017 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 NA29_RS00220 6806f23578a5462421f862989e627f63 417 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 226 240 - T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 NA29_RS00220 6806f23578a5462421f862989e627f63 417 SUPERFAMILY SSF53383 70 414 8.34E-91 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS00220 6806f23578a5462421f862989e627f63 417 PIRSF PIRSF001434 18 415 5.7E-120 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 NA29_RS00220 6806f23578a5462421f862989e627f63 417 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 33 412 4.6E-99 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 NA29_RS22580 f2acdfb90402705969af795216097e60 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 259 1.5E-68 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS22580 f2acdfb90402705969af795216097e60 260 Gene3D G3DSA:1.10.12.10 202 260 6.0E-21 T 09-03-2017 IPR014748 Crontonase, C-terminal NA29_RS22580 f2acdfb90402705969af795216097e60 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 09-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 NA29_RS22580 f2acdfb90402705969af795216097e60 260 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 7 260 3.5E-125 T 09-03-2017 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18 NA29_RS22580 f2acdfb90402705969af795216097e60 260 Gene3D G3DSA:3.90.226.10 3 201 1.4E-66 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS22580 f2acdfb90402705969af795216097e60 260 SUPERFAMILY SSF52096 2 260 3.98E-84 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS11235 543e4aa1f0282c608672f146fecb9904 296 Gene3D G3DSA:3.40.190.10 98 196 4.5E-17 T 09-03-2017 NA29_RS11235 543e4aa1f0282c608672f146fecb9904 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 3.0E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11235 543e4aa1f0282c608672f146fecb9904 296 SUPERFAMILY SSF46785 7 120 1.72E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11235 543e4aa1f0282c608672f146fecb9904 296 Gene3D G3DSA:1.10.10.10 12 92 5.4E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11235 543e4aa1f0282c608672f146fecb9904 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 7.9E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11235 543e4aa1f0282c608672f146fecb9904 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 7.9E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11235 543e4aa1f0282c608672f146fecb9904 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 7.9E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11235 543e4aa1f0282c608672f146fecb9904 296 Pfam PF03466 LysR substrate binding domain 101 280 1.2E-28 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS11235 543e4aa1f0282c608672f146fecb9904 296 SUPERFAMILY SSF53850 101 290 4.75E-28 T 09-03-2017 NA29_RS11235 543e4aa1f0282c608672f146fecb9904 296 Gene3D G3DSA:3.40.190.10 197 247 3.7E-10 T 09-03-2017 NA29_RS12885 f24bf58c669bdbc80519e9d40270594e 382 Pfam PF02608 Basic membrane protein 52 316 2.9E-49 T 09-03-2017 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 NA29_RS12885 f24bf58c669bdbc80519e9d40270594e 382 Gene3D G3DSA:3.40.50.2300 156 311 1.7E-42 T 09-03-2017 NA29_RS12885 f24bf58c669bdbc80519e9d40270594e 382 SUPERFAMILY SSF53822 191 260 3.43E-5 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS04030 120d3835c29d895a6c9cec6f0de5b6da 462 Pfam PF07690 Major Facilitator Superfamily 43 414 3.1E-45 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS04030 120d3835c29d895a6c9cec6f0de5b6da 462 SUPERFAMILY SSF103473 25 450 3.4E-78 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS04030 120d3835c29d895a6c9cec6f0de5b6da 462 Gene3D G3DSA:1.20.1250.20 31 235 8.2E-47 T 09-03-2017 NA29_RS04030 120d3835c29d895a6c9cec6f0de5b6da 462 Gene3D G3DSA:1.20.1250.20 267 450 3.6E-16 T 09-03-2017 NA29_RS25000 66d98c8bff2885de91bd3d96f4e5e519 277 SUPERFAMILY SSF47757 5 78 1.96E-23 T 09-03-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NA29_RS25000 66d98c8bff2885de91bd3d96f4e5e519 277 SMART SM00138 11 270 1.9E-102 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS25000 66d98c8bff2885de91bd3d96f4e5e519 277 PRINTS PR00996 Glutamate methyltransferase family signature 72 84 1.2E-43 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS25000 66d98c8bff2885de91bd3d96f4e5e519 277 PRINTS PR00996 Glutamate methyltransferase family signature 138 154 1.2E-43 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS25000 66d98c8bff2885de91bd3d96f4e5e519 277 PRINTS PR00996 Glutamate methyltransferase family signature 210 224 1.2E-43 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS25000 66d98c8bff2885de91bd3d96f4e5e519 277 PRINTS PR00996 Glutamate methyltransferase family signature 33 46 1.2E-43 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS25000 66d98c8bff2885de91bd3d96f4e5e519 277 PRINTS PR00996 Glutamate methyltransferase family signature 229 252 1.2E-43 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS25000 66d98c8bff2885de91bd3d96f4e5e519 277 PRINTS PR00996 Glutamate methyltransferase family signature 105 125 1.2E-43 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS25000 66d98c8bff2885de91bd3d96f4e5e519 277 Gene3D G3DSA:3.40.50.150 78 267 4.8E-66 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS25000 66d98c8bff2885de91bd3d96f4e5e519 277 PIRSF PIRSF000410 2 270 5.9E-96 T 09-03-2017 IPR026024 Chemotaxis protein methyltransferase CheR NA29_RS25000 66d98c8bff2885de91bd3d96f4e5e519 277 Pfam PF01739 CheR methyltransferase, SAM binding domain 79 265 2.9E-55 T 09-03-2017 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal NA29_RS25000 66d98c8bff2885de91bd3d96f4e5e519 277 Pfam PF03705 CheR methyltransferase, all-alpha domain 12 63 1.2E-20 T 09-03-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NA29_RS25000 66d98c8bff2885de91bd3d96f4e5e519 277 Gene3D G3DSA:1.10.155.10 4 77 2.6E-30 T 09-03-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NA29_RS25000 66d98c8bff2885de91bd3d96f4e5e519 277 SUPERFAMILY SSF53335 79 267 9.53E-56 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS23165 c876a52958bb6a187300645f15513a0f 339 Pfam PF04860 Phage portal protein 82 314 3.5E-13 T 09-03-2017 IPR006944 Bacteriophage/Gene transfer agent portal protein NA29_RS23165 c876a52958bb6a187300645f15513a0f 339 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 45 323 1.4E-79 T 09-03-2017 IPR006430 Phage portal protein PBSX family NA29_RS23165 c876a52958bb6a187300645f15513a0f 339 PIRSF PIRSF018494 3 339 1.2E-154 T 09-03-2017 IPR030935 Phage portal protein PBSX family, Proteobacteria NA29_RS13590 71a012c009bd61d3a492cf37fa9a2bdd 588 SUPERFAMILY SSF52518 369 572 4.61E-52 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS13590 71a012c009bd61d3a492cf37fa9a2bdd 588 Gene3D G3DSA:3.40.50.970 2 182 9.1E-64 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS13590 71a012c009bd61d3a492cf37fa9a2bdd 588 Gene3D G3DSA:3.40.50.1220 186 359 4.6E-46 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS13590 71a012c009bd61d3a492cf37fa9a2bdd 588 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 582 0.0 T 09-03-2017 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47 NA29_RS13590 71a012c009bd61d3a492cf37fa9a2bdd 588 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 327 3.9E-33 T 09-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 NA29_RS13590 71a012c009bd61d3a492cf37fa9a2bdd 588 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 6.1E-36 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NA29_RS13590 71a012c009bd61d3a492cf37fa9a2bdd 588 SUPERFAMILY SSF52518 1 185 4.17E-50 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS13590 71a012c009bd61d3a492cf37fa9a2bdd 588 SUPERFAMILY SSF52467 161 348 1.48E-44 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS13590 71a012c009bd61d3a492cf37fa9a2bdd 588 Gene3D G3DSA:3.40.50.970 362 575 6.0E-60 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS13590 71a012c009bd61d3a492cf37fa9a2bdd 588 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 172 1.9E-53 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 NA29_RS01430 bf5c3212731373cebefde4feea6647e3 400 Pfam PF02653 Branched-chain amino acid transport system / permease component 66 360 3.5E-40 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS01430 bf5c3212731373cebefde4feea6647e3 400 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 57 371 3.4E-133 T 09-03-2017 IPR017778 ABC transporter, urea, permease protein, UrtC NA29_RS14660 216ba6f0c0f0e96a2571506a5d0400eb 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 09-03-2017 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 NA29_RS14660 216ba6f0c0f0e96a2571506a5d0400eb 164 SUPERFAMILY SSF50891 1 162 9.64E-59 T 09-03-2017 IPR029000 Cyclophilin-like domain NA29_RS14660 216ba6f0c0f0e96a2571506a5d0400eb 164 Gene3D G3DSA:2.40.100.10 2 162 1.1E-53 T 09-03-2017 IPR029000 Cyclophilin-like domain NA29_RS14660 216ba6f0c0f0e96a2571506a5d0400eb 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 160 1.4E-48 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NA29_RS14660 216ba6f0c0f0e96a2571506a5d0400eb 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 2.9E-12 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NA29_RS14660 216ba6f0c0f0e96a2571506a5d0400eb 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 2.9E-12 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NA29_RS14660 216ba6f0c0f0e96a2571506a5d0400eb 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.9E-12 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NA29_RS14660 216ba6f0c0f0e96a2571506a5d0400eb 164 PIRSF PIRSF001467 1 164 2.6E-26 T 09-03-2017 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 NA29_RS03355 83f03ec1e155923cd6b81b1d4765dabf 439 Pfam PF00083 Sugar (and other) transporter 27 226 8.5E-27 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS03355 83f03ec1e155923cd6b81b1d4765dabf 439 Pfam PF00083 Sugar (and other) transporter 233 424 4.1E-10 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS03355 83f03ec1e155923cd6b81b1d4765dabf 439 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 34 421 3.8E-140 T 09-03-2017 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 NA29_RS03355 83f03ec1e155923cd6b81b1d4765dabf 439 Gene3D G3DSA:1.20.1250.20 250 433 7.1E-19 T 09-03-2017 NA29_RS03355 83f03ec1e155923cd6b81b1d4765dabf 439 Gene3D G3DSA:1.20.1250.20 22 232 3.5E-24 T 09-03-2017 NA29_RS03355 83f03ec1e155923cd6b81b1d4765dabf 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 137 162 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS03355 83f03ec1e155923cd6b81b1d4765dabf 439 SUPERFAMILY SSF103473 23 436 3.79E-66 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS04495 d8265ed786dc17ee2776dc3080d58a47 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 26 132 9.5E-20 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NA29_RS04495 d8265ed786dc17ee2776dc3080d58a47 246 SUPERFAMILY SSF161098 25 223 1.15E-39 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS04495 d8265ed786dc17ee2776dc3080d58a47 246 Gene3D G3DSA:1.10.3720.10 23 237 1.1E-41 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS04495 d8265ed786dc17ee2776dc3080d58a47 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 238 6.8E-24 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS05605 120c9ee903d5c672c93afa660942527a 340 Pfam PF01300 Telomere recombination 13 197 2.5E-47 T 09-03-2017 IPR006070 YrdC-like domain GO:0003725 NA29_RS05605 120c9ee903d5c672c93afa660942527a 340 Gene3D G3DSA:3.90.870.10 3 210 3.7E-68 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain NA29_RS05605 120c9ee903d5c672c93afa660942527a 340 SUPERFAMILY SSF55821 4 210 1.31E-55 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain NA29_RS05605 120c9ee903d5c672c93afa660942527a 340 Pfam PF03481 Putative GTP-binding controlling metal-binding 199 335 1.6E-19 T 09-03-2017 IPR005145 Putative GTP-binding controlling metal-binding domain NA29_RS05605 120c9ee903d5c672c93afa660942527a 340 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 2 208 1.0E-47 T 09-03-2017 IPR006070 YrdC-like domain GO:0003725 NA29_RS05605 120c9ee903d5c672c93afa660942527a 340 PIRSF PIRSF004930 1 340 1.0E-93 T 09-03-2017 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 NA29_RS00205 bc2deb9606d2cff5cfbd3affb02b0111 255 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS00205 bc2deb9606d2cff5cfbd3affb02b0111 255 SUPERFAMILY SSF52540 1 235 1.1E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00205 bc2deb9606d2cff5cfbd3affb02b0111 255 Pfam PF00005 ABC transporter 17 165 6.0E-36 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS00205 bc2deb9606d2cff5cfbd3affb02b0111 255 PIRSF PIRSF039085 1 241 1.7E-104 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 NA29_RS00205 bc2deb9606d2cff5cfbd3affb02b0111 255 Gene3D G3DSA:3.40.50.300 1 237 1.5E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00205 bc2deb9606d2cff5cfbd3affb02b0111 255 SMART SM00382 26 213 5.4E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS14945 fb77f1aae9f9d735674638d38a0c504f 372 SUPERFAMILY SSF56112 23 358 7.67E-62 T 09-03-2017 IPR011009 Protein kinase-like domain NA29_RS14945 fb77f1aae9f9d735674638d38a0c504f 372 Pfam PF01636 Phosphotransferase enzyme family 46 269 7.3E-57 T 09-03-2017 IPR002575 Aminoglycoside phosphotransferase NA29_RS14945 fb77f1aae9f9d735674638d38a0c504f 372 Gene3D G3DSA:3.90.1200.10 126 319 7.8E-32 T 09-03-2017 NA29_RS10305 220aafceeaefd94161412454616880d6 580 SUPERFAMILY SSF56801 35 578 5.76E-150 T 09-03-2017 NA29_RS10305 220aafceeaefd94161412454616880d6 580 ProSitePatterns PS00455 Putative AMP-binding domain signature. 228 239 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS10305 220aafceeaefd94161412454616880d6 580 Pfam PF00501 AMP-binding enzyme 44 483 1.2E-108 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS10305 220aafceeaefd94161412454616880d6 580 Gene3D G3DSA:3.40.50.980 202 233 7.2E-42 T 09-03-2017 NA29_RS10305 220aafceeaefd94161412454616880d6 580 Gene3D G3DSA:3.40.50.980 39 166 7.2E-42 T 09-03-2017 NA29_RS10305 220aafceeaefd94161412454616880d6 580 Pfam PF13193 AMP-binding enzyme C-terminal domain 492 567 7.5E-18 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS10305 220aafceeaefd94161412454616880d6 580 Gene3D G3DSA:3.40.50.980 234 390 2.9E-40 T 09-03-2017 NA29_RS10305 220aafceeaefd94161412454616880d6 580 Gene3D G3DSA:2.30.38.10 400 473 1.2E-29 T 09-03-2017 NA29_RS10305 220aafceeaefd94161412454616880d6 580 Gene3D G3DSA:3.30.300.30 478 577 3.0E-29 T 09-03-2017 NA29_RS11810 b0f7e2cf670ed99d7341fff950e38f57 481 Gene3D G3DSA:3.40.605.10 9 265 1.2E-89 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS11810 b0f7e2cf670ed99d7341fff950e38f57 481 Pfam PF00171 Aldehyde dehydrogenase family 17 476 5.8E-155 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS11810 b0f7e2cf670ed99d7341fff950e38f57 481 SUPERFAMILY SSF53720 6 477 6.02E-157 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS11810 b0f7e2cf670ed99d7341fff950e38f57 481 Gene3D G3DSA:3.40.309.10 266 451 6.4E-62 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS02045 b41188952185e74aba8b090e33780e85 226 SMART SM00947 35 198 4.3E-68 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS02045 b41188952185e74aba8b090e33780e85 226 Pfam PF00484 Carbonic anhydrase 42 193 1.6E-51 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS02045 b41188952185e74aba8b090e33780e85 226 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 87 107 - T 09-03-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS02045 b41188952185e74aba8b090e33780e85 226 SUPERFAMILY SSF53056 5 216 9.68E-77 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS02045 b41188952185e74aba8b090e33780e85 226 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 47 54 - T 09-03-2017 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS02045 b41188952185e74aba8b090e33780e85 226 Gene3D G3DSA:3.40.1050.10 3 205 1.0E-76 T 09-03-2017 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 NA29_RS19230 e6e8ba10788b1210aac24a4065a95edd 323 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 238 8.7E-34 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NA29_RS19230 e6e8ba10788b1210aac24a4065a95edd 323 SUPERFAMILY SSF111369 46 180 4.05E-23 T 09-03-2017 NA29_RS19230 e6e8ba10788b1210aac24a4065a95edd 323 Pfam PF13533 Biotin-lipoyl like 48 94 4.5E-18 T 09-03-2017 NA29_RS19230 e6e8ba10788b1210aac24a4065a95edd 323 Gene3D G3DSA:2.40.50.100 47 80 1.1E-16 T 09-03-2017 NA29_RS19230 e6e8ba10788b1210aac24a4065a95edd 323 Gene3D G3DSA:2.40.50.100 153 186 1.1E-16 T 09-03-2017 NA29_RS19230 e6e8ba10788b1210aac24a4065a95edd 323 Pfam PF13437 HlyD family secretion protein 156 238 1.8E-9 T 09-03-2017 NA29_RS07415 fe9ac0c1d82d1a867f9cd009c02a738e 220 SUPERFAMILY SSF52499 12 210 2.88E-49 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS07415 fe9ac0c1d82d1a867f9cd009c02a738e 220 Pfam PF00857 Isochorismatase family 30 203 1.4E-37 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS07415 fe9ac0c1d82d1a867f9cd009c02a738e 220 Gene3D G3DSA:3.40.50.850 29 215 6.6E-50 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS09565 62b3b45ebf23ad396605801613f1695b 225 Gene3D G3DSA:2.10.109.10 127 223 1.9E-25 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain NA29_RS09565 62b3b45ebf23ad396605801613f1695b 225 Gene3D G3DSA:1.10.260.40 18 49 9.3E-4 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS09565 62b3b45ebf23ad396605801613f1695b 225 Pfam PF00717 Peptidase S24-like 134 188 9.7E-13 T 09-03-2017 IPR019759 Peptidase S24/S26A/S26B NA29_RS09565 62b3b45ebf23ad396605801613f1695b 225 SUPERFAMILY SSF51306 91 217 3.4E-20 T 09-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C NA29_RS22445 0e26126c7feab0289b2e2a565b4203e7 469 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 407 8.8E-20 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS22445 0e26126c7feab0289b2e2a565b4203e7 469 SUPERFAMILY SSF51984 6 92 5.23E-29 T 09-03-2017 NA29_RS22445 0e26126c7feab0289b2e2a565b4203e7 469 Gene3D G3DSA:3.40.50.720 6 92 6.3E-35 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22445 0e26126c7feab0289b2e2a565b4203e7 469 SUPERFAMILY SSF53623 91 311 6.8E-70 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS22445 0e26126c7feab0289b2e2a565b4203e7 469 Pfam PF01225 Mur ligase family, catalytic domain 7 105 6.6E-25 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 NA29_RS22445 0e26126c7feab0289b2e2a565b4203e7 469 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 459 5.4E-166 T 09-03-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS22445 0e26126c7feab0289b2e2a565b4203e7 469 SUPERFAMILY SSF53244 312 460 1.83E-46 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS22445 0e26126c7feab0289b2e2a565b4203e7 469 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 469 43.174 T 09-03-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS22445 0e26126c7feab0289b2e2a565b4203e7 469 Gene3D G3DSA:3.40.1190.10 94 314 2.8E-82 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS22445 0e26126c7feab0289b2e2a565b4203e7 469 Pfam PF08245 Mur ligase middle domain 110 293 4.3E-28 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS22445 0e26126c7feab0289b2e2a565b4203e7 469 Gene3D G3DSA:3.90.190.20 315 463 4.3E-55 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS12545 dac58184b7bc8f8e5e12bfcca941cbba 513 Pfam PF02321 Outer membrane efflux protein 320 489 1.7E-20 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS12545 dac58184b7bc8f8e5e12bfcca941cbba 513 Pfam PF02321 Outer membrane efflux protein 87 282 6.8E-29 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS12545 dac58184b7bc8f8e5e12bfcca941cbba 513 Gene3D G3DSA:1.20.1600.10 71 505 5.8E-96 T 09-03-2017 NA29_RS12545 dac58184b7bc8f8e5e12bfcca941cbba 513 SUPERFAMILY SSF56954 77 505 2.22E-99 T 09-03-2017 NA29_RS12545 dac58184b7bc8f8e5e12bfcca941cbba 513 SUPERFAMILY SSF56954 15 45 2.22E-99 T 09-03-2017 NA29_RS12545 dac58184b7bc8f8e5e12bfcca941cbba 513 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 24 501 5.6E-94 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NA29_RS24115 428365074789f8b258fd22c870b1fe7c 548 SUPERFAMILY SSF56024 63 252 8.07E-40 T 09-03-2017 NA29_RS24115 428365074789f8b258fd22c870b1fe7c 548 SUPERFAMILY SSF56024 297 482 4.04E-36 T 09-03-2017 NA29_RS24115 428365074789f8b258fd22c870b1fe7c 548 Pfam PF13091 PLD-like domain 90 241 8.0E-20 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 NA29_RS24115 428365074789f8b258fd22c870b1fe7c 548 Pfam PF13091 PLD-like domain 332 479 5.8E-27 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 NA29_RS24115 428365074789f8b258fd22c870b1fe7c 548 Gene3D G3DSA:3.30.870.10 70 254 8.0E-41 T 09-03-2017 NA29_RS24115 428365074789f8b258fd22c870b1fe7c 548 SMART SM00155 182 209 2.1E-4 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 NA29_RS24115 428365074789f8b258fd22c870b1fe7c 548 SMART SM00155 426 453 0.0058 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 NA29_RS24115 428365074789f8b258fd22c870b1fe7c 548 Gene3D G3DSA:3.30.870.10 282 480 1.1E-41 T 09-03-2017 NA29_RS04435 171efae16a8344740e35acf05132d3e9 172 SUPERFAMILY SSF55811 17 168 2.03E-24 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS04435 171efae16a8344740e35acf05132d3e9 172 Pfam PF00293 NUDIX domain 26 165 1.2E-13 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 NA29_RS04435 171efae16a8344740e35acf05132d3e9 172 PRINTS PR01404 DATP pyrophosphohydrolase signature 94 113 5.9E-6 T 09-03-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 NA29_RS04435 171efae16a8344740e35acf05132d3e9 172 PRINTS PR01404 DATP pyrophosphohydrolase signature 22 39 5.9E-6 T 09-03-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 NA29_RS04435 171efae16a8344740e35acf05132d3e9 172 PRINTS PR01404 DATP pyrophosphohydrolase signature 151 164 5.9E-6 T 09-03-2017 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 NA29_RS04435 171efae16a8344740e35acf05132d3e9 172 Gene3D G3DSA:3.90.79.10 23 167 1.9E-25 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS08880 c0d37bcd49ea6f1f383c7cdb41892aa9 406 SMART SM00729 24 245 3.2E-52 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NA29_RS08880 c0d37bcd49ea6f1f383c7cdb41892aa9 406 Pfam PF06969 HemN C-terminal domain 328 390 5.5E-10 T 09-03-2017 IPR010723 HemN, C-terminal NA29_RS08880 c0d37bcd49ea6f1f383c7cdb41892aa9 406 Pfam PF04055 Radical SAM superfamily 29 202 4.9E-18 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 NA29_RS08880 c0d37bcd49ea6f1f383c7cdb41892aa9 406 Gene3D G3DSA:3.80.30.20 25 259 3.5E-30 T 09-03-2017 IPR023404 Radical SAM, alpha/beta horseshoe NA29_RS08880 c0d37bcd49ea6f1f383c7cdb41892aa9 406 SUPERFAMILY SSF102114 23 401 7.46E-105 T 09-03-2017 NA29_RS08880 c0d37bcd49ea6f1f383c7cdb41892aa9 406 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 25 389 1.8E-108 T 09-03-2017 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 NA29_RS08365 896e1156ea5b6fab398b2a168f901e20 192 Pfam PF04542 Sigma-70 region 2 9 70 1.1E-13 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08365 896e1156ea5b6fab398b2a168f901e20 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 168 3.0E-24 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08365 896e1156ea5b6fab398b2a168f901e20 192 SUPERFAMILY SSF88659 109 170 2.06E-16 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08365 896e1156ea5b6fab398b2a168f901e20 192 SUPERFAMILY SSF88946 7 84 3.06E-17 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08365 896e1156ea5b6fab398b2a168f901e20 192 Pfam PF08281 Sigma-70, region 4 114 166 2.5E-16 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08365 896e1156ea5b6fab398b2a168f901e20 192 Gene3D G3DSA:1.10.10.10 110 171 3.8E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08365 896e1156ea5b6fab398b2a168f901e20 192 Gene3D G3DSA:1.10.1740.10 7 71 1.4E-19 T 09-03-2017 NA29_RS05805 c544dc57b8c399b32335c7c9151d7124 516 Gene3D G3DSA:3.40.50.980 173 324 3.4E-38 T 09-03-2017 NA29_RS05805 c544dc57b8c399b32335c7c9151d7124 516 SUPERFAMILY SSF56801 4 506 2.09E-143 T 09-03-2017 NA29_RS05805 c544dc57b8c399b32335c7c9151d7124 516 Gene3D G3DSA:3.30.300.30 404 501 6.6E-31 T 09-03-2017 NA29_RS05805 c544dc57b8c399b32335c7c9151d7124 516 Pfam PF00501 AMP-binding enzyme 9 409 1.7E-88 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS05805 c544dc57b8c399b32335c7c9151d7124 516 Pfam PF13193 AMP-binding enzyme C-terminal domain 418 493 1.7E-18 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS05805 c544dc57b8c399b32335c7c9151d7124 516 ProSitePatterns PS00455 Putative AMP-binding domain signature. 166 177 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS05805 c544dc57b8c399b32335c7c9151d7124 516 Gene3D G3DSA:2.30.38.10 331 403 1.4E-24 T 09-03-2017 NA29_RS05805 c544dc57b8c399b32335c7c9151d7124 516 Gene3D G3DSA:3.40.50.980 5 172 2.1E-27 T 09-03-2017 NA29_RS21060 89ab5a323e0f98854783bcfe9d91abd5 397 SUPERFAMILY SSF54675 1 136 9.18E-44 T 09-03-2017 NA29_RS21060 89ab5a323e0f98854783bcfe9d91abd5 397 PIRSF PIRSF000484 1 377 4.4E-64 T 09-03-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 NA29_RS21060 89ab5a323e0f98854783bcfe9d91abd5 397 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 391 46.407 T 09-03-2017 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 NA29_RS21060 89ab5a323e0f98854783bcfe9d91abd5 397 SUPERFAMILY SSF51690 118 388 1.18E-87 T 09-03-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 NA29_RS21060 89ab5a323e0f98854783bcfe9d91abd5 397 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 2 389 1.9E-143 T 09-03-2017 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 NA29_RS21060 89ab5a323e0f98854783bcfe9d91abd5 397 Gene3D G3DSA:3.20.140.10 1 373 5.8E-145 T 09-03-2017 NA29_RS21060 89ab5a323e0f98854783bcfe9d91abd5 397 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 164 388 2.2E-73 T 09-03-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 NA29_RS06425 75892902e3bb83eb9aeba33d7bcc51ad 172 Pfam PF02417 Chromate transporter 4 159 2.8E-30 T 09-03-2017 IPR003370 Chromate transporter GO:0015109|GO:0015703 NA29_RS11415 e4c3964f72b9e5ef2327fcb260f46899 255 SUPERFAMILY SSF161098 57 243 3.4E-31 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS11415 e4c3964f72b9e5ef2327fcb260f46899 255 Gene3D G3DSA:1.10.3720.10 55 251 1.5E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS11415 e4c3964f72b9e5ef2327fcb260f46899 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 250 1.1E-24 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16880 b1513b402661acd376a1344ffac6a178 357 SUPERFAMILY SSF53383 2 355 5.41E-81 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS16880 b1513b402661acd376a1344ffac6a178 357 Pfam PF00266 Aminotransferase class-V 26 348 2.0E-23 T 09-03-2017 IPR000192 Aminotransferase class V domain NA29_RS16880 b1513b402661acd376a1344ffac6a178 357 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 2 351 3.2E-110 T 09-03-2017 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 NA29_RS16880 b1513b402661acd376a1344ffac6a178 357 Gene3D G3DSA:3.40.640.10 13 248 3.2E-47 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS16880 b1513b402661acd376a1344ffac6a178 357 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 357 126.202 T 09-03-2017 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 NA29_RS16880 b1513b402661acd376a1344ffac6a178 357 Gene3D G3DSA:3.90.1150.10 249 353 7.5E-30 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS16880 b1513b402661acd376a1344ffac6a178 357 PIRSF PIRSF000524 1 357 1.7E-67 T 09-03-2017 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 NA29_RS17645 ab60cf7fa32925097edb435a47afe659 140 Gene3D G3DSA:2.40.40.20 1 123 5.1E-55 T 09-03-2017 NA29_RS17645 ab60cf7fa32925097edb435a47afe659 140 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 128 72.537 T 09-03-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 NA29_RS17645 ab60cf7fa32925097edb435a47afe659 140 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 2.2E-51 T 09-03-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 NA29_RS17645 ab60cf7fa32925097edb435a47afe659 140 Pfam PF02261 Aspartate decarboxylase 1 114 9.9E-52 T 09-03-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 NA29_RS17645 ab60cf7fa32925097edb435a47afe659 140 PIRSF PIRSF006246 1 136 1.8E-51 T 09-03-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 NA29_RS17645 ab60cf7fa32925097edb435a47afe659 140 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 1.0E-52 T 09-03-2017 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 NA29_RS17645 ab60cf7fa32925097edb435a47afe659 140 SUPERFAMILY SSF50692 1 120 1.24E-48 T 09-03-2017 IPR009010 Aspartate decarboxylase-like domain NA29_RS13540 31bc9f38e39cbb0faeb96f31fc34c90e 276 Gene3D G3DSA:3.90.1720.10 69 191 2.1E-41 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain NA29_RS13540 31bc9f38e39cbb0faeb96f31fc34c90e 276 Pfam PF00877 NlpC/P60 family 81 188 6.2E-27 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain NA29_RS13540 31bc9f38e39cbb0faeb96f31fc34c90e 276 SUPERFAMILY SSF54001 70 189 8.5E-40 T 09-03-2017 NA29_RS25050 3d780d69889223f023d09b63305f713c 105 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 102 2.2E-44 T 09-03-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 NA29_RS25050 3d780d69889223f023d09b63305f713c 105 SUPERFAMILY SSF63592 1 98 4.18E-37 T 09-03-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 NA29_RS25050 3d780d69889223f023d09b63305f713c 105 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 10 97 1.0E-29 T 09-03-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 NA29_RS25050 3d780d69889223f023d09b63305f713c 105 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 28.506 T 09-03-2017 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 NA29_RS04820 f6f699ac2d5541b4dd7697d6a5c7c48b 150 PIRSF PIRSF000027 5 150 1.6E-42 T 09-03-2017 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 NA29_RS04820 f6f699ac2d5541b4dd7697d6a5c7c48b 150 Pfam PF01322 Cytochrome C' 29 148 5.0E-38 T 09-03-2017 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 NA29_RS04820 f6f699ac2d5541b4dd7697d6a5c7c48b 150 SUPERFAMILY SSF47175 24 148 7.95E-39 T 09-03-2017 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 NA29_RS04820 f6f699ac2d5541b4dd7697d6a5c7c48b 150 Gene3D G3DSA:1.20.120.10 23 150 2.2E-45 T 09-03-2017 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 NA29_RS22005 09965b1f9a00d3c6f3373cf65087f878 447 SUPERFAMILY SSF55920 179 445 1.57E-80 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS22005 09965b1f9a00d3c6f3373cf65087f878 447 Gene3D G3DSA:3.90.230.10 181 445 1.1E-78 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS22005 09965b1f9a00d3c6f3373cf65087f878 447 Gene3D G3DSA:3.40.350.10 5 180 5.1E-51 T 09-03-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal NA29_RS22005 09965b1f9a00d3c6f3373cf65087f878 447 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 355 367 - T 09-03-2017 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site NA29_RS22005 09965b1f9a00d3c6f3373cf65087f878 447 Pfam PF05195 Aminopeptidase P, N-terminal domain 10 125 2.7E-36 T 09-03-2017 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 NA29_RS22005 09965b1f9a00d3c6f3373cf65087f878 447 Pfam PF00557 Metallopeptidase family M24 184 424 7.4E-60 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS22005 09965b1f9a00d3c6f3373cf65087f878 447 SMART SM01011 5 139 5.4E-64 T 09-03-2017 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 NA29_RS22005 09965b1f9a00d3c6f3373cf65087f878 447 SUPERFAMILY SSF53092 5 177 8.55E-53 T 09-03-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal NA29_RS25250 08ec44dad39c1f1ec99fe8724dbfb37b 770 Gene3D G3DSA:2.40.170.20 197 769 2.8E-93 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS25250 08ec44dad39c1f1ec99fe8724dbfb37b 770 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 59 770 1.1E-110 T 09-03-2017 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 NA29_RS25250 08ec44dad39c1f1ec99fe8724dbfb37b 770 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 60 770 3.1E-121 T 09-03-2017 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 NA29_RS25250 08ec44dad39c1f1ec99fe8724dbfb37b 770 Pfam PF00593 TonB dependent receptor 497 768 2.6E-36 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS25250 08ec44dad39c1f1ec99fe8724dbfb37b 770 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 192 1.2E-26 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS25250 08ec44dad39c1f1ec99fe8724dbfb37b 770 Gene3D G3DSA:2.170.130.10 54 196 3.9E-40 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS25250 08ec44dad39c1f1ec99fe8724dbfb37b 770 SUPERFAMILY SSF56935 54 769 2.62E-108 T 09-03-2017 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 72 95 4.2E-120 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 171 189 4.2E-120 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 384 403 4.2E-120 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 200 219 4.2E-120 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 99 123 4.2E-120 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 434 455 4.2E-120 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 142 154 4.2E-120 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 251 272 4.2E-120 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 297 312 4.2E-120 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 25 50 4.2E-120 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 321 342 4.2E-120 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 356 374 4.2E-120 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 253 307 - T 09-03-2017 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 SUPERFAMILY SSF81442 22 529 9.81E-194 T 09-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 34 475 1.4E-155 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 Gene3D G3DSA:1.20.210.10 14 529 3.6E-220 T 09-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02535 4258ba49e95ea69283530a2e108520ef 530 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 26 529 5.3E-213 T 09-03-2017 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 NA29_RS10640 68ecfa8bd4ffc486b72b7a521194530e 448 Gene3D G3DSA:3.30.1540.10 276 349 7.9E-20 T 09-03-2017 NA29_RS10640 68ecfa8bd4ffc486b72b7a521194530e 448 Gene3D G3DSA:3.40.50.10540 350 425 4.4E-72 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS10640 68ecfa8bd4ffc486b72b7a521194530e 448 Gene3D G3DSA:3.40.50.10540 3 210 4.4E-72 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS10640 68ecfa8bd4ffc486b72b7a521194530e 448 SUPERFAMILY SSF89796 4 425 2.18E-76 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS10640 68ecfa8bd4ffc486b72b7a521194530e 448 Pfam PF02515 CoA-transferase family III 228 417 2.1E-24 T 09-03-2017 IPR003673 CoA-transferase family III GO:0003824 NA29_RS10640 68ecfa8bd4ffc486b72b7a521194530e 448 Pfam PF02515 CoA-transferase family III 5 213 2.0E-52 T 09-03-2017 IPR003673 CoA-transferase family III GO:0003824 NA29_RS10500 0dd576aa7fb0eb3f491d2f948145ff56 220 Hamap MF_00165 Thymidylate kinase [tmk]. 14 216 28.965 T 09-03-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 NA29_RS10500 0dd576aa7fb0eb3f491d2f948145ff56 220 Pfam PF02223 Thymidylate kinase 18 207 3.4E-46 T 09-03-2017 NA29_RS10500 0dd576aa7fb0eb3f491d2f948145ff56 220 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 13 206 1.9E-48 T 09-03-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 NA29_RS10500 0dd576aa7fb0eb3f491d2f948145ff56 220 Gene3D G3DSA:3.40.50.300 13 213 9.4E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10500 0dd576aa7fb0eb3f491d2f948145ff56 220 SUPERFAMILY SSF52540 13 212 5.13E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01560 6fb66354494c4992027d99e3d817b0d5 118 SUPERFAMILY SSF54593 8 116 4.83E-25 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS01560 6fb66354494c4992027d99e3d817b0d5 118 Gene3D G3DSA:3.10.180.10 8 115 3.4E-25 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS01560 6fb66354494c4992027d99e3d817b0d5 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 112 5.5E-10 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NA29_RS06275 3a6942718ec9394bc7ed6a0cf6d33157 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 2.6E-21 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS06275 3a6942718ec9394bc7ed6a0cf6d33157 204 SUPERFAMILY SSF47616 69 202 8.11E-6 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS06275 3a6942718ec9394bc7ed6a0cf6d33157 204 Gene3D G3DSA:3.40.30.10 1 94 8.9E-19 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS06275 3a6942718ec9394bc7ed6a0cf6d33157 204 SUPERFAMILY SSF52833 1 88 3.2E-18 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS15850 0d483c9c8ec6fed8d3356e05f7094547 422 ProSitePatterns PS00217 Sugar transport proteins signature 2. 127 152 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS15850 0d483c9c8ec6fed8d3356e05f7094547 422 Gene3D G3DSA:1.20.1250.20 233 416 6.0E-29 T 09-03-2017 NA29_RS15850 0d483c9c8ec6fed8d3356e05f7094547 422 Gene3D G3DSA:1.20.1250.20 31 209 2.2E-30 T 09-03-2017 NA29_RS15850 0d483c9c8ec6fed8d3356e05f7094547 422 SUPERFAMILY SSF103473 24 422 2.62E-83 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS15850 0d483c9c8ec6fed8d3356e05f7094547 422 Pfam PF07690 Major Facilitator Superfamily 36 294 4.3E-37 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS20965 18b668b035bac48cd849427d6d0b8de9 59 SUPERFAMILY SSF57829 2 55 1.22E-17 T 09-03-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 NA29_RS20965 18b668b035bac48cd849427d6d0b8de9 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.5E-20 T 09-03-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS20965 18b668b035bac48cd849427d6d0b8de9 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.023 T 09-03-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS20965 18b668b035bac48cd849427d6d0b8de9 59 Pfam PF01783 Ribosomal L32p protein family 2 55 4.3E-19 T 09-03-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS19025 32cbdceac7401351b0530f9d45d60b4d 98 Pfam PF00583 Acetyltransferase (GNAT) family 36 94 8.1E-5 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS19025 32cbdceac7401351b0530f9d45d60b4d 98 Gene3D G3DSA:3.40.630.30 4 94 9.2E-11 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS19025 32cbdceac7401351b0530f9d45d60b4d 98 SUPERFAMILY SSF55729 9 94 7.09E-10 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS10825 26d2afb126bc4a0a8d0502a92326c604 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 184 1.2E-6 T 09-03-2017 NA29_RS10825 26d2afb126bc4a0a8d0502a92326c604 247 Gene3D G3DSA:3.40.50.720 2 246 2.0E-82 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10825 26d2afb126bc4a0a8d0502a92326c604 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS10825 26d2afb126bc4a0a8d0502a92326c604 247 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 246 2.0E-108 T 09-03-2017 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 NA29_RS10825 26d2afb126bc4a0a8d0502a92326c604 247 SUPERFAMILY SSF51735 4 246 5.98E-79 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10825 26d2afb126bc4a0a8d0502a92326c604 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.8E-16 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10825 26d2afb126bc4a0a8d0502a92326c604 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.8E-16 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10825 26d2afb126bc4a0a8d0502a92326c604 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.8E-16 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10825 26d2afb126bc4a0a8d0502a92326c604 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 7.9E-60 T 09-03-2017 NA29_RS10825 26d2afb126bc4a0a8d0502a92326c604 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 9.1E-48 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10825 26d2afb126bc4a0a8d0502a92326c604 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 9.1E-48 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10825 26d2afb126bc4a0a8d0502a92326c604 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 9.1E-48 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10825 26d2afb126bc4a0a8d0502a92326c604 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 9.1E-48 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10825 26d2afb126bc4a0a8d0502a92326c604 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 9.1E-48 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10825 26d2afb126bc4a0a8d0502a92326c604 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 9.1E-48 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS09785 da85b4e596460a7115a3dac248028b46 336 SUPERFAMILY SSF53474 90 212 1.3E-11 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS09785 da85b4e596460a7115a3dac248028b46 336 Pfam PF11187 Protein of unknown function (DUF2974) 129 240 6.4E-6 T 09-03-2017 IPR024499 Protein of unknown function DUF2974 NA29_RS09785 da85b4e596460a7115a3dac248028b46 336 Gene3D G3DSA:3.40.50.1820 100 210 3.9E-8 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS12105 507a528c195af8b298b58f7c060fb56e 217 Gene3D G3DSA:3.40.109.10 38 214 2.8E-24 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 NA29_RS12105 507a528c195af8b298b58f7c060fb56e 217 Pfam PF00881 Nitroreductase family 46 212 2.5E-22 T 09-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 NA29_RS12105 507a528c195af8b298b58f7c060fb56e 217 SUPERFAMILY SSF55469 44 214 2.36E-24 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 NA29_RS09845 245b2b989cad51ba8288ebb12fe835a8 450 Gene3D G3DSA:3.40.50.300 157 426 3.6E-38 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09845 245b2b989cad51ba8288ebb12fe835a8 450 SUPERFAMILY SSF52172 16 144 1.18E-5 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS09845 245b2b989cad51ba8288ebb12fe835a8 450 SUPERFAMILY SSF52540 219 426 3.13E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09845 245b2b989cad51ba8288ebb12fe835a8 450 Gene3D G3DSA:3.40.50.2300 24 144 3.3E-8 T 09-03-2017 NA29_RS05455 4d049fcc58cf41a7dead0febcea0acb4 351 Gene3D G3DSA:3.20.20.30 1 345 2.1E-81 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS05455 4d049fcc58cf41a7dead0febcea0acb4 351 Pfam PF00296 Luciferase-like monooxygenase 1 315 4.0E-64 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS05455 4d049fcc58cf41a7dead0febcea0acb4 351 SUPERFAMILY SSF51679 1 344 3.14E-77 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS17295 84788509414648e72cee80dc2fab0d88 289 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS17295 84788509414648e72cee80dc2fab0d88 289 SMART SM00382 60 243 8.2E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS17295 84788509414648e72cee80dc2fab0d88 289 Pfam PF00005 ABC transporter 52 193 3.6E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS17295 84788509414648e72cee80dc2fab0d88 289 Gene3D G3DSA:3.40.50.300 31 240 6.5E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17295 84788509414648e72cee80dc2fab0d88 289 SUPERFAMILY SSF52540 50 243 1.13E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS04470 f601689289c37daebb6332ec03a3dca3 139 SUPERFAMILY SSF54637 13 136 1.71E-35 T 09-03-2017 IPR029069 HotDog domain NA29_RS04470 f601689289c37daebb6332ec03a3dca3 139 Pfam PF03061 Thioesterase superfamily 31 105 3.4E-14 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 NA29_RS04470 f601689289c37daebb6332ec03a3dca3 139 Gene3D G3DSA:3.10.129.10 12 137 6.7E-37 T 09-03-2017 IPR029069 HotDog domain NA29_RS10390 e2ebe14122d4fa24980697f1902d13d8 530 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 459 469 - T 09-03-2017 IPR017953 Carbohydrate kinase, predicted, conserved site NA29_RS10390 e2ebe14122d4fa24980697f1902d13d8 530 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 257 518 6.9E-59 T 09-03-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 NA29_RS10390 e2ebe14122d4fa24980697f1902d13d8 530 Gene3D G3DSA:3.40.50.10260 30 260 2.7E-56 T 09-03-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 NA29_RS10390 e2ebe14122d4fa24980697f1902d13d8 530 SUPERFAMILY SSF53613 250 518 4.43E-65 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS10390 e2ebe14122d4fa24980697f1902d13d8 530 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 27 236 20.261 T 09-03-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 NA29_RS10390 e2ebe14122d4fa24980697f1902d13d8 530 SUPERFAMILY SSF64153 31 273 2.22E-51 T 09-03-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 NA29_RS10390 e2ebe14122d4fa24980697f1902d13d8 530 Pfam PF03853 YjeF-related protein N-terminus 47 211 2.4E-37 T 09-03-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 NA29_RS10390 e2ebe14122d4fa24980697f1902d13d8 530 Gene3D G3DSA:3.40.1190.20 261 518 5.3E-79 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS10390 e2ebe14122d4fa24980697f1902d13d8 530 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 44 234 1.8E-29 T 09-03-2017 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 NA29_RS10390 e2ebe14122d4fa24980697f1902d13d8 530 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 252 521 22.402 T 09-03-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 NA29_RS10390 e2ebe14122d4fa24980697f1902d13d8 530 PIRSF PIRSF017184 27 526 1.7E-110 T 09-03-2017 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 NA29_RS10390 e2ebe14122d4fa24980697f1902d13d8 530 Pfam PF01256 Carbohydrate kinase 276 500 1.0E-51 T 09-03-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 NA29_RS15800 b962e3be655138e47342ec9498f3a417 299 SUPERFAMILY SSF53850 91 296 2.71E-36 T 09-03-2017 NA29_RS15800 b962e3be655138e47342ec9498f3a417 299 Gene3D G3DSA:3.40.190.10 96 194 2.9E-25 T 09-03-2017 NA29_RS15800 b962e3be655138e47342ec9498f3a417 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.2E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS15800 b962e3be655138e47342ec9498f3a417 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.2E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS15800 b962e3be655138e47342ec9498f3a417 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.2E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS15800 b962e3be655138e47342ec9498f3a417 299 Pfam PF03466 LysR substrate binding domain 93 293 1.5E-28 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS15800 b962e3be655138e47342ec9498f3a417 299 SUPERFAMILY SSF46785 4 80 2.92E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15800 b962e3be655138e47342ec9498f3a417 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 9.8E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS15800 b962e3be655138e47342ec9498f3a417 299 Gene3D G3DSA:1.10.10.10 4 81 8.2E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01470 026c7143c8ec6760560ca5e532eeb72d 442 SUPERFAMILY SSF53383 2 440 3.78E-122 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS01470 026c7143c8ec6760560ca5e532eeb72d 442 Pfam PF00202 Aminotransferase class-III 23 438 8.7E-111 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS01470 026c7143c8ec6760560ca5e532eeb72d 442 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 251 288 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS01470 026c7143c8ec6760560ca5e532eeb72d 442 Gene3D G3DSA:3.90.1150.10 4 62 5.3E-45 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS01470 026c7143c8ec6760560ca5e532eeb72d 442 Gene3D G3DSA:3.90.1150.10 344 441 5.3E-45 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS01470 026c7143c8ec6760560ca5e532eeb72d 442 Gene3D G3DSA:3.40.640.10 64 342 1.3E-83 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 Gene3D G3DSA:3.20.70.20 770 815 3.8E-83 T 09-03-2017 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 Gene3D G3DSA:3.20.70.20 876 917 3.8E-83 T 09-03-2017 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 Gene3D G3DSA:3.20.70.20 293 498 3.8E-83 T 09-03-2017 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 Gene3D G3DSA:3.20.70.20 553 714 3.8E-83 T 09-03-2017 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 SUPERFAMILY SSF51998 850 918 3.97E-178 T 09-03-2017 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 SUPERFAMILY SSF51998 376 819 3.97E-178 T 09-03-2017 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 Pfam PF03477 ATP cone domain 42 138 9.8E-19 T 09-03-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 303 918 8.1E-210 T 09-03-2017 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 SUPERFAMILY SSF48168 164 375 5.23E-60 T 09-03-2017 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 PRINTS PR01183 Ribonucleotide reductase large chain signature 770 797 4.1E-44 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 PRINTS PR01183 Ribonucleotide reductase large chain signature 666 688 4.1E-44 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 PRINTS PR01183 Ribonucleotide reductase large chain signature 694 717 4.1E-44 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 PRINTS PR01183 Ribonucleotide reductase large chain signature 452 471 4.1E-44 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 PRINTS PR01183 Ribonucleotide reductase large chain signature 587 598 4.1E-44 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 PRINTS PR01183 Ribonucleotide reductase large chain signature 628 651 4.1E-44 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 759 781 - T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 300 373 7.2E-21 T 09-03-2017 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS22275 769c18e1e6391091532bd0902694bcf9 983 Pfam PF02867 Ribonucleotide reductase, barrel domain 377 915 2.6E-181 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS01285 613888fa4978eef4691de4102d36aba7 430 SUPERFAMILY SSF103473 11 414 1.15E-33 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS01285 613888fa4978eef4691de4102d36aba7 430 Pfam PF07690 Major Facilitator Superfamily 23 376 6.5E-17 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS01285 613888fa4978eef4691de4102d36aba7 430 Gene3D G3DSA:1.20.1250.20 17 205 7.7E-11 T 09-03-2017 NA29_RS01285 613888fa4978eef4691de4102d36aba7 430 Gene3D G3DSA:1.20.1250.20 235 408 7.1E-13 T 09-03-2017 NA29_RS14335 2ecc5e48b0e8d844afa48c3daf5cbd43 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 4.4E-83 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 NA29_RS14335 2ecc5e48b0e8d844afa48c3daf5cbd43 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 4.4E-83 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 NA29_RS14335 2ecc5e48b0e8d844afa48c3daf5cbd43 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 4.4E-83 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 NA29_RS14335 2ecc5e48b0e8d844afa48c3daf5cbd43 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 4.4E-83 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 NA29_RS14335 2ecc5e48b0e8d844afa48c3daf5cbd43 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 4.4E-83 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 NA29_RS14335 2ecc5e48b0e8d844afa48c3daf5cbd43 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 4.4E-83 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 NA29_RS14335 2ecc5e48b0e8d844afa48c3daf5cbd43 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 4.4E-83 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 NA29_RS14335 2ecc5e48b0e8d844afa48c3daf5cbd43 283 Gene3D G3DSA:3.40.192.10 7 138 4.0E-52 T 09-03-2017 NA29_RS14335 2ecc5e48b0e8d844afa48c3daf5cbd43 283 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 38.879 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 NA29_RS14335 2ecc5e48b0e8d844afa48c3daf5cbd43 283 SUPERFAMILY SSF51735 122 280 5.56E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS14335 2ecc5e48b0e8d844afa48c3daf5cbd43 283 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 09-03-2017 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 NA29_RS14335 2ecc5e48b0e8d844afa48c3daf5cbd43 283 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 7.0E-69 T 09-03-2017 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 NA29_RS14335 2ecc5e48b0e8d844afa48c3daf5cbd43 283 SUPERFAMILY SSF53223 1 121 1.63E-41 T 09-03-2017 NA29_RS14335 2ecc5e48b0e8d844afa48c3daf5cbd43 283 Gene3D G3DSA:3.40.50.720 139 263 8.6E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS14335 2ecc5e48b0e8d844afa48c3daf5cbd43 283 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 09-03-2017 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 NA29_RS14335 2ecc5e48b0e8d844afa48c3daf5cbd43 283 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 1.2E-42 T 09-03-2017 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 79 91 5.5E-25 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 275 294 5.5E-25 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 192 205 5.5E-25 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 373 386 5.5E-25 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 59 77 5.5E-25 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 SUPERFAMILY SSF51419 28 287 1.14E-80 T 09-03-2017 IPR029066 PLP-binding barrel NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 17 416 42.266 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 228 243 - T 09-03-2017 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 Gene3D G3DSA:2.40.37.10 267 417 9.5E-49 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 SUPERFAMILY SSF50621 265 417 1.3E-54 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 40 285 3.1E-69 T 09-03-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 Gene3D G3DSA:3.20.20.10 38 266 1.3E-77 T 09-03-2017 IPR029066 PLP-binding barrel NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 10 415 8.5E-161 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 292 393 2.1E-16 T 09-03-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 166 175 2.4E-29 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 383 405 2.4E-29 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 303 321 2.4E-29 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS23685 ef4aa2485d2227c44c87be53c2fae773 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 77 94 2.4E-29 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 NA29_RS25210 eb1d24d1b0a86ac94a7d04d97f643046 458 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 NA29_RS25210 eb1d24d1b0a86ac94a7d04d97f643046 458 Gene3D G3DSA:1.10.40.30 412 457 2.9E-33 T 09-03-2017 NA29_RS25210 eb1d24d1b0a86ac94a7d04d97f643046 458 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 1 456 4.5E-242 T 09-03-2017 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 NA29_RS25210 eb1d24d1b0a86ac94a7d04d97f643046 458 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 1.6E-6 T 09-03-2017 NA29_RS25210 eb1d24d1b0a86ac94a7d04d97f643046 458 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 1.6E-6 T 09-03-2017 NA29_RS25210 eb1d24d1b0a86ac94a7d04d97f643046 458 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 1.6E-6 T 09-03-2017 NA29_RS25210 eb1d24d1b0a86ac94a7d04d97f643046 458 Gene3D G3DSA:1.20.200.10 134 411 5.8E-105 T 09-03-2017 NA29_RS25210 eb1d24d1b0a86ac94a7d04d97f643046 458 Pfam PF10415 Fumarase C C-terminus 403 456 4.5E-27 T 09-03-2017 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 NA29_RS25210 eb1d24d1b0a86ac94a7d04d97f643046 458 Hamap MF_00743 Fumarate hydratase class II [fumC]. 1 457 91.51 T 09-03-2017 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 NA29_RS25210 eb1d24d1b0a86ac94a7d04d97f643046 458 SUPERFAMILY SSF48557 2 458 9.27E-159 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 NA29_RS25210 eb1d24d1b0a86ac94a7d04d97f643046 458 Gene3D G3DSA:1.10.275.10 1 133 6.7E-62 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal NA29_RS25210 eb1d24d1b0a86ac94a7d04d97f643046 458 Pfam PF00206 Lyase 7 337 3.5E-120 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal NA29_RS25210 eb1d24d1b0a86ac94a7d04d97f643046 458 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 3.1E-34 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS25210 eb1d24d1b0a86ac94a7d04d97f643046 458 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 3.1E-34 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS25210 eb1d24d1b0a86ac94a7d04d97f643046 458 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 3.1E-34 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS25210 eb1d24d1b0a86ac94a7d04d97f643046 458 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 3.1E-34 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS10870 1d441dea485bbbae15a2e6961f9e50fc 98 Pfam PF13473 Cupredoxin-like domain 7 97 3.1E-13 T 09-03-2017 IPR028096 EfeO-type cupredoxin-like domain NA29_RS10870 1d441dea485bbbae15a2e6961f9e50fc 98 Gene3D G3DSA:2.60.40.420 3 98 1.0E-29 T 09-03-2017 IPR008972 Cupredoxin NA29_RS10870 1d441dea485bbbae15a2e6961f9e50fc 98 PRINTS PR00155 Amicyanin family signature 26 45 2.7E-8 T 09-03-2017 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 NA29_RS10870 1d441dea485bbbae15a2e6961f9e50fc 98 PRINTS PR00155 Amicyanin family signature 82 97 2.7E-8 T 09-03-2017 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 NA29_RS10870 1d441dea485bbbae15a2e6961f9e50fc 98 PRINTS PR00155 Amicyanin family signature 66 81 2.7E-8 T 09-03-2017 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 NA29_RS10870 1d441dea485bbbae15a2e6961f9e50fc 98 SUPERFAMILY SSF49503 4 98 6.71E-29 T 09-03-2017 IPR008972 Cupredoxin NA29_RS18540 c69a6293fe9ee203fe952bd0f847b716 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 50 20.01 T 09-03-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 NA29_RS18540 c69a6293fe9ee203fe952bd0f847b716 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 6.9E-16 T 09-03-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 NA29_RS18540 c69a6293fe9ee203fe952bd0f847b716 53 PIRSF PIRSF036466 1 53 6.5E-22 T 09-03-2017 IPR009760 Protein of unknown function DUF1328 GO:0005886 NA29_RS01900 bd985b534a10a0539ca2fd9b2e5d3ba2 307 Gene3D G3DSA:3.60.15.10 16 227 3.4E-38 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS01900 bd985b534a10a0539ca2fd9b2e5d3ba2 307 SUPERFAMILY SSF56281 16 222 3.38E-39 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS01900 bd985b534a10a0539ca2fd9b2e5d3ba2 307 SMART SM00849 19 203 6.8E-23 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS01900 bd985b534a10a0539ca2fd9b2e5d3ba2 307 Pfam PF00753 Metallo-beta-lactamase superfamily 16 203 1.9E-18 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS01900 bd985b534a10a0539ca2fd9b2e5d3ba2 307 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 62 82 - T 09-03-2017 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 NA29_RS03000 255fd5458805b9299442925ab0dbb95d 224 Pfam PF13309 HTH domain 158 217 4.2E-14 T 09-03-2017 NA29_RS03000 255fd5458805b9299442925ab0dbb95d 224 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 18 123 1.0E-48 T 09-03-2017 IPR013559 YheO-like NA29_RS03000 255fd5458805b9299442925ab0dbb95d 224 Pfam PF08348 YheO-like PAS domain 21 128 4.7E-32 T 09-03-2017 IPR013559 YheO-like NA29_RS03000 255fd5458805b9299442925ab0dbb95d 224 Gene3D G3DSA:1.10.10.60 188 217 2.4E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS11355 bd484dc88ed30dad857d9d8842c74db6 122 SUPERFAMILY SSF51316 1 120 1.99E-35 T 09-03-2017 IPR011057 Mss4-like NA29_RS11355 bd484dc88ed30dad857d9d8842c74db6 122 Gene3D G3DSA:3.90.1590.10 1 121 3.7E-24 T 09-03-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 NA29_RS11355 bd484dc88ed30dad857d9d8842c74db6 122 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 107 1.7E-10 T 09-03-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 NA29_RS21550 241cee75846b87536dfb93677450e407 280 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 271 18.348 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 NA29_RS21550 241cee75846b87536dfb93677450e407 280 Pfam PF02673 Bacitracin resistance protein BacA 9 266 7.3E-81 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 NA29_RS21550 241cee75846b87536dfb93677450e407 280 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 264 5.2E-75 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 NA29_RS06045 0a2a141029d719ead7c4a736d4737404 552 Pfam PF03797 Autotransporter beta-domain 285 533 6.3E-46 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS06045 0a2a141029d719ead7c4a736d4737404 552 Gene3D G3DSA:2.40.128.130 247 552 1.9E-79 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS06045 0a2a141029d719ead7c4a736d4737404 552 Pfam PF03212 Pertactin 102 217 4.0E-29 T 09-03-2017 IPR004899 Pertactin, central region NA29_RS06045 0a2a141029d719ead7c4a736d4737404 552 SMART SM00869 287 541 2.0E-41 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS06045 0a2a141029d719ead7c4a736d4737404 552 SUPERFAMILY SSF103515 261 552 4.97E-52 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS06045 0a2a141029d719ead7c4a736d4737404 552 SUPERFAMILY SSF51126 12 218 1.1E-33 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS06045 0a2a141029d719ead7c4a736d4737404 552 Gene3D G3DSA:2.160.20.20 14 218 1.9E-41 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS06045 0a2a141029d719ead7c4a736d4737404 552 PRINTS PR01484 Pertactin virulence factor family signature 532 552 2.0E-28 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 NA29_RS06045 0a2a141029d719ead7c4a736d4737404 552 PRINTS PR01484 Pertactin virulence factor family signature 440 463 2.0E-28 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 NA29_RS06045 0a2a141029d719ead7c4a736d4737404 552 PRINTS PR01484 Pertactin virulence factor family signature 329 353 2.0E-28 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 NA29_RS06045 0a2a141029d719ead7c4a736d4737404 552 PRINTS PR01484 Pertactin virulence factor family signature 266 284 2.0E-28 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 NA29_RS06045 0a2a141029d719ead7c4a736d4737404 552 PRINTS PR01484 Pertactin virulence factor family signature 507 532 2.0E-28 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 NA29_RS06045 0a2a141029d719ead7c4a736d4737404 552 PRINTS PR01484 Pertactin virulence factor family signature 421 438 2.0E-28 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 NA29_RS06045 0a2a141029d719ead7c4a736d4737404 552 PRINTS PR01484 Pertactin virulence factor family signature 469 490 2.0E-28 T 09-03-2017 IPR003991 Pertactin virulence factor family GO:0007155 NA29_RS06045 0a2a141029d719ead7c4a736d4737404 552 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 122 552 2.8E-100 T 09-03-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 NA29_RS18920 e4d5211d691ca0341266da9c0141f6b8 288 SUPERFAMILY SSF161098 83 270 1.83E-30 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS18920 e4d5211d691ca0341266da9c0141f6b8 288 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 57 2.9E-11 T 09-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain NA29_RS18920 e4d5211d691ca0341266da9c0141f6b8 288 Gene3D G3DSA:1.10.3720.10 81 285 2.5E-29 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS18920 e4d5211d691ca0341266da9c0141f6b8 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 286 2.3E-32 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS14565 de105dbfebcb9c8ea73cf67cd4910488 343 SUPERFAMILY SSF48452 106 239 6.25E-7 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS14565 de105dbfebcb9c8ea73cf67cd4910488 343 Pfam PF13181 Tetratricopeptide repeat 188 218 0.0073 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS14565 de105dbfebcb9c8ea73cf67cd4910488 343 SUPERFAMILY SSF48452 11 134 5.31E-13 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS14565 de105dbfebcb9c8ea73cf67cd4910488 343 Gene3D G3DSA:1.25.40.10 123 244 1.5E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS14565 de105dbfebcb9c8ea73cf67cd4910488 343 Gene3D G3DSA:1.25.40.10 6 122 2.7E-12 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS14565 de105dbfebcb9c8ea73cf67cd4910488 343 SMART SM00028 36 69 66.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS14565 de105dbfebcb9c8ea73cf67cd4910488 343 SMART SM00028 70 103 11.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS14565 de105dbfebcb9c8ea73cf67cd4910488 343 SMART SM00028 188 221 53.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS20885 eb3d105a5130c971ac26a433e38650bd 333 Pfam PF02565 Recombination protein O C terminal 179 324 1.7E-21 T 09-03-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 NA29_RS20885 eb3d105a5130c971ac26a433e38650bd 333 Pfam PF11967 Recombination protein O N terminal 100 173 4.6E-24 T 09-03-2017 IPR022572 DNA replication/recombination mediator RecO, N-terminal NA29_RS20885 eb3d105a5130c971ac26a433e38650bd 333 Gene3D G3DSA:2.40.50.140 97 175 6.3E-12 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS20885 eb3d105a5130c971ac26a433e38650bd 333 TIGRFAM TIGR00613 reco: DNA repair protein RecO 102 250 8.0E-31 T 09-03-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 NA29_RS20885 eb3d105a5130c971ac26a433e38650bd 333 SUPERFAMILY SSF50249 99 173 1.68E-16 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS20885 eb3d105a5130c971ac26a433e38650bd 333 Hamap MF_00201 DNA repair protein RecO [recO]. 98 330 22.927 T 09-03-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 NA29_RS20885 eb3d105a5130c971ac26a433e38650bd 333 SUPERFAMILY SSF57863 183 274 4.18E-11 T 09-03-2017 NA29_RS17750 c015260faa55621a6f871a99c0aad5c6 321 Pfam PF12146 Serine aminopeptidase, S33 34 269 2.2E-75 T 09-03-2017 IPR022742 Serine aminopeptidase, S33 NA29_RS17750 c015260faa55621a6f871a99c0aad5c6 321 SUPERFAMILY SSF53474 9 285 2.79E-44 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS17750 c015260faa55621a6f871a99c0aad5c6 321 Gene3D G3DSA:3.40.50.1820 6 291 3.8E-49 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS16020 0bfae2febf9d52a16ad3a391aa84c26a 305 Gene3D G3DSA:3.40.190.10 96 178 1.4E-16 T 09-03-2017 NA29_RS16020 0bfae2febf9d52a16ad3a391aa84c26a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.8E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16020 0bfae2febf9d52a16ad3a391aa84c26a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.8E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16020 0bfae2febf9d52a16ad3a391aa84c26a 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.8E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16020 0bfae2febf9d52a16ad3a391aa84c26a 305 Pfam PF03466 LysR substrate binding domain 93 296 3.3E-31 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS16020 0bfae2febf9d52a16ad3a391aa84c26a 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.6E-23 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16020 0bfae2febf9d52a16ad3a391aa84c26a 305 Gene3D G3DSA:3.40.190.10 179 268 7.2E-21 T 09-03-2017 NA29_RS16020 0bfae2febf9d52a16ad3a391aa84c26a 305 Gene3D G3DSA:1.10.10.10 5 90 3.3E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16020 0bfae2febf9d52a16ad3a391aa84c26a 305 SUPERFAMILY SSF53850 96 294 3.37E-29 T 09-03-2017 NA29_RS16020 0bfae2febf9d52a16ad3a391aa84c26a 305 SUPERFAMILY SSF46785 5 90 2.95E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS23130 066757adec6b24565c825b8d4c6e6943 676 SUPERFAMILY SSF51126 23 324 1.07E-40 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS23130 066757adec6b24565c825b8d4c6e6943 676 Pfam PF05860 haemagglutination activity domain 15 128 6.8E-29 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS23130 066757adec6b24565c825b8d4c6e6943 676 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 47 125 4.6E-24 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS23130 066757adec6b24565c825b8d4c6e6943 676 SMART SM00912 30 130 1.8E-17 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS23130 066757adec6b24565c825b8d4c6e6943 676 Gene3D G3DSA:2.160.20.10 20 314 7.0E-59 T 09-03-2017 IPR012334 Pectin lyase fold NA29_RS10340 5541c793f89a9df5d25f08d3d48a5c6c 217 Pfam PF00574 Clp protease 36 215 1.3E-87 T 09-03-2017 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA NA29_RS10340 5541c793f89a9df5d25f08d3d48a5c6c 217 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 113 124 - T 09-03-2017 IPR018215 ClpP, Ser active site NA29_RS10340 5541c793f89a9df5d25f08d3d48a5c6c 217 PRINTS PR00127 Clp protease catalytic subunit P signature 134 153 1.6E-52 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NA29_RS10340 5541c793f89a9df5d25f08d3d48a5c6c 217 PRINTS PR00127 Clp protease catalytic subunit P signature 42 57 1.6E-52 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NA29_RS10340 5541c793f89a9df5d25f08d3d48a5c6c 217 PRINTS PR00127 Clp protease catalytic subunit P signature 82 102 1.6E-52 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NA29_RS10340 5541c793f89a9df5d25f08d3d48a5c6c 217 PRINTS PR00127 Clp protease catalytic subunit P signature 113 130 1.6E-52 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NA29_RS10340 5541c793f89a9df5d25f08d3d48a5c6c 217 PRINTS PR00127 Clp protease catalytic subunit P signature 191 210 1.6E-52 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NA29_RS10340 5541c793f89a9df5d25f08d3d48a5c6c 217 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 26 216 44.437 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NA29_RS10340 5541c793f89a9df5d25f08d3d48a5c6c 217 SUPERFAMILY SSF52096 34 215 1.77E-73 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS10340 5541c793f89a9df5d25f08d3d48a5c6c 217 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 135 148 - T 09-03-2017 IPR033135 ClpP, histidine active site NA29_RS10340 5541c793f89a9df5d25f08d3d48a5c6c 217 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 25 215 3.0E-104 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 NA29_RS10340 5541c793f89a9df5d25f08d3d48a5c6c 217 Gene3D G3DSA:3.90.226.10 26 215 2.7E-86 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS17655 0572fd7d45c95544b00cf454fb0ae726 503 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 19 239 9.6E-31 T 09-03-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain NA29_RS17655 0572fd7d45c95544b00cf454fb0ae726 503 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 19 495 8.6E-142 T 09-03-2017 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 NA29_RS17655 0572fd7d45c95544b00cf454fb0ae726 503 SUPERFAMILY SSF52317 269 464 1.14E-37 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS17655 0572fd7d45c95544b00cf454fb0ae726 503 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 503 205.311 T 09-03-2017 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 NA29_RS17655 0572fd7d45c95544b00cf454fb0ae726 503 Gene3D G3DSA:3.40.50.880 266 466 5.2E-31 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS17655 0572fd7d45c95544b00cf454fb0ae726 503 Gene3D G3DSA:3.40.50.300 18 249 7.5E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17655 0572fd7d45c95544b00cf454fb0ae726 503 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 267 454 5.1E-57 T 09-03-2017 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 NA29_RS17655 0572fd7d45c95544b00cf454fb0ae726 503 SUPERFAMILY SSF52540 18 252 1.22E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19875 d5e3b726de1643a371b6dd14e7ad6404 151 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 9 98 2.4E-11 T 09-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 NA29_RS19875 d5e3b726de1643a371b6dd14e7ad6404 151 SUPERFAMILY SSF54534 9 150 1.36E-31 T 09-03-2017 NA29_RS19875 d5e3b726de1643a371b6dd14e7ad6404 151 Gene3D G3DSA:3.10.50.40 9 84 9.1E-17 T 09-03-2017 NA29_RS19875 d5e3b726de1643a371b6dd14e7ad6404 151 Gene3D G3DSA:3.10.50.40 137 150 9.1E-17 T 09-03-2017 NA29_RS17075 feda3795bcb922aa5b89c6f4c54d163f 235 SUPERFAMILY SSF53639 2 206 6.87E-43 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS17075 feda3795bcb922aa5b89c6f4c54d163f 235 SMART SM01007 6 190 3.0E-31 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS17075 feda3795bcb922aa5b89c6f4c54d163f 235 Gene3D G3DSA:3.40.225.10 3 210 1.4E-51 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS17075 feda3795bcb922aa5b89c6f4c54d163f 235 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 7 189 3.4E-37 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS23060 deff067b0e7b7122e082ec2e95d00d78 396 Gene3D G3DSA:3.30.70.360 181 297 4.5E-42 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS23060 deff067b0e7b7122e082ec2e95d00d78 396 Gene3D G3DSA:3.40.630.10 3 178 3.0E-103 T 09-03-2017 NA29_RS23060 deff067b0e7b7122e082ec2e95d00d78 396 Gene3D G3DSA:3.40.630.10 298 395 3.0E-103 T 09-03-2017 NA29_RS23060 deff067b0e7b7122e082ec2e95d00d78 396 Pfam PF07687 Peptidase dimerisation domain 185 283 2.5E-11 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS23060 deff067b0e7b7122e082ec2e95d00d78 396 SUPERFAMILY SSF53187 298 394 1.63E-91 T 09-03-2017 NA29_RS23060 deff067b0e7b7122e082ec2e95d00d78 396 SUPERFAMILY SSF53187 2 197 1.63E-91 T 09-03-2017 NA29_RS23060 deff067b0e7b7122e082ec2e95d00d78 396 PIRSF PIRSF005962 1 396 6.5E-129 T 09-03-2017 IPR017439 Amidohydrolase GO:0016787 NA29_RS23060 deff067b0e7b7122e082ec2e95d00d78 396 SUPERFAMILY SSF55031 183 296 2.88E-32 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS23060 deff067b0e7b7122e082ec2e95d00d78 396 Pfam PF01546 Peptidase family M20/M25/M40 73 360 2.2E-36 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NA29_RS23060 deff067b0e7b7122e082ec2e95d00d78 396 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 382 5.6E-110 T 09-03-2017 IPR017439 Amidohydrolase GO:0016787 NA29_RS24375 c1a24158eb8e137d4a6dc142c70fd4f4 531 Gene3D G3DSA:2.60.40.420 123 264 4.8E-34 T 09-03-2017 IPR008972 Cupredoxin NA29_RS24375 c1a24158eb8e137d4a6dc142c70fd4f4 531 SUPERFAMILY SSF46626 275 377 1.58E-20 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24375 c1a24158eb8e137d4a6dc142c70fd4f4 531 Gene3D G3DSA:1.10.760.10 284 375 1.5E-22 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24375 c1a24158eb8e137d4a6dc142c70fd4f4 531 Gene3D G3DSA:1.10.287.90 30 114 1.8E-5 T 09-03-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24375 c1a24158eb8e137d4a6dc142c70fd4f4 531 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 126 250 1.2E-14 T 09-03-2017 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24375 c1a24158eb8e137d4a6dc142c70fd4f4 531 Pfam PF00034 Cytochrome c 285 375 2.2E-11 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24375 c1a24158eb8e137d4a6dc142c70fd4f4 531 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 198 246 - T 09-03-2017 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24375 c1a24158eb8e137d4a6dc142c70fd4f4 531 SUPERFAMILY SSF81464 28 114 1.61E-6 T 09-03-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24375 c1a24158eb8e137d4a6dc142c70fd4f4 531 SUPERFAMILY SSF49503 175 317 3.93E-40 T 09-03-2017 IPR008972 Cupredoxin NA29_RS24375 c1a24158eb8e137d4a6dc142c70fd4f4 531 SUPERFAMILY SSF49503 118 144 3.93E-40 T 09-03-2017 IPR008972 Cupredoxin NA29_RS24375 c1a24158eb8e137d4a6dc142c70fd4f4 531 PRINTS PR01166 Cytochrome c oxidase subunit II signature 121 140 1.1E-5 T 09-03-2017 NA29_RS24375 c1a24158eb8e137d4a6dc142c70fd4f4 531 PRINTS PR01166 Cytochrome c oxidase subunit II signature 197 217 1.1E-5 T 09-03-2017 NA29_RS24375 c1a24158eb8e137d4a6dc142c70fd4f4 531 PRINTS PR01166 Cytochrome c oxidase subunit II signature 235 252 1.1E-5 T 09-03-2017 NA29_RS05590 23bf7215ea35530129bf77bdc3acf1bb 296 SUPERFAMILY SSF56104 4 295 4.58E-106 T 09-03-2017 NA29_RS05590 23bf7215ea35530129bf77bdc3acf1bb 296 Gene3D G3DSA:3.30.470.20 117 247 2.7E-55 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS05590 23bf7215ea35530129bf77bdc3acf1bb 296 ProSitePatterns PS01058 SAICAR synthetase signature 2. 204 212 - T 09-03-2017 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 NA29_RS05590 23bf7215ea35530129bf77bdc3acf1bb 296 ProSitePatterns PS01057 SAICAR synthetase signature 1. 105 119 - T 09-03-2017 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 NA29_RS05590 23bf7215ea35530129bf77bdc3acf1bb 296 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 15 293 3.4E-80 T 09-03-2017 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 NA29_RS05590 23bf7215ea35530129bf77bdc3acf1bb 296 Gene3D G3DSA:3.30.200.20 4 116 5.4E-44 T 09-03-2017 NA29_RS05590 23bf7215ea35530129bf77bdc3acf1bb 296 Pfam PF01259 SAICAR synthetase 14 267 8.9E-103 T 09-03-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 NA29_RS05590 23bf7215ea35530129bf77bdc3acf1bb 296 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 12 292 26.814 T 09-03-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 NA29_RS07270 c6169f2633a629a1462e5f8f079364b1 166 Gene3D G3DSA:3.30.110.60 5 94 1.0E-29 T 09-03-2017 IPR001890 RNA-binding, CRM domain GO:0003723 NA29_RS07270 c6169f2633a629a1462e5f8f079364b1 166 Pfam PF01985 CRS1 / YhbY (CRM) domain 6 89 1.0E-18 T 09-03-2017 IPR001890 RNA-binding, CRM domain GO:0003723 NA29_RS07270 c6169f2633a629a1462e5f8f079364b1 166 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 14 90 2.0E-29 T 09-03-2017 IPR001890 RNA-binding, CRM domain GO:0003723 NA29_RS07270 c6169f2633a629a1462e5f8f079364b1 166 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 6 95 3.8E-23 T 09-03-2017 IPR017924 RNA-binding protein YhbY GO:0003723 NA29_RS07270 c6169f2633a629a1462e5f8f079364b1 166 SUPERFAMILY SSF75471 5 94 5.36E-28 T 09-03-2017 IPR001890 RNA-binding, CRM domain GO:0003723 NA29_RS07270 c6169f2633a629a1462e5f8f079364b1 166 SMART SM01103 6 89 1.2E-41 T 09-03-2017 IPR001890 RNA-binding, CRM domain GO:0003723 NA29_RS01910 534b2ec040089d23275e58f56836b27d 80 Pfam PF06945 Protein of unknown function (DUF1289) 10 57 5.1E-20 T 09-03-2017 IPR010710 Protein of unknown function DUF1289 NA29_RS20080 f3aec3fefa09d1a2da6d2e49d5cc0a87 204 Pfam PF01618 MotA/TolQ/ExbB proton channel family 69 190 1.4E-32 T 09-03-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 NA29_RS13060 a5a86665e99354b7eee1220999153d9d 300 Pfam PF03466 LysR substrate binding domain 94 296 2.9E-19 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS13060 a5a86665e99354b7eee1220999153d9d 300 SUPERFAMILY SSF46785 2 82 2.83E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13060 a5a86665e99354b7eee1220999153d9d 300 Gene3D G3DSA:3.40.190.10 171 267 4.6E-24 T 09-03-2017 NA29_RS13060 a5a86665e99354b7eee1220999153d9d 300 SUPERFAMILY SSF53850 92 295 4.71E-34 T 09-03-2017 NA29_RS13060 a5a86665e99354b7eee1220999153d9d 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.1E-14 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13060 a5a86665e99354b7eee1220999153d9d 300 Gene3D G3DSA:3.40.190.10 272 299 3.2E-22 T 09-03-2017 NA29_RS13060 a5a86665e99354b7eee1220999153d9d 300 Gene3D G3DSA:3.40.190.10 89 170 3.2E-22 T 09-03-2017 NA29_RS13060 a5a86665e99354b7eee1220999153d9d 300 Gene3D G3DSA:1.10.10.10 2 83 3.0E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20410 1d079f580629af4b8cc3489db9e7a7a3 486 PIRSF PIRSF004919 23 486 3.9E-137 T 09-03-2017 IPR025502 TldD NA29_RS20410 1d079f580629af4b8cc3489db9e7a7a3 486 Pfam PF01523 Putative modulator of DNA gyrase 43 337 1.0E-68 T 09-03-2017 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 NA29_RS20410 1d079f580629af4b8cc3489db9e7a7a3 486 SUPERFAMILY SSF111283 27 485 4.58E-135 T 09-03-2017 NA29_RS05675 4e6a87dba951b41418aa5666e3ec39b7 371 SUPERFAMILY SSF50331 244 369 5.29E-17 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS05675 4e6a87dba951b41418aa5666e3ec39b7 371 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS05675 4e6a87dba951b41418aa5666e3ec39b7 371 Pfam PF00005 ABC transporter 26 165 1.0E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS05675 4e6a87dba951b41418aa5666e3ec39b7 371 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 369 3.1E-117 T 09-03-2017 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 NA29_RS05675 4e6a87dba951b41418aa5666e3ec39b7 371 Gene3D G3DSA:2.40.50.100 290 367 4.0E-16 T 09-03-2017 NA29_RS05675 4e6a87dba951b41418aa5666e3ec39b7 371 Pfam PF03459 TOBE domain 302 369 1.6E-13 T 09-03-2017 IPR005116 Transport-associated OB, type 1 NA29_RS05675 4e6a87dba951b41418aa5666e3ec39b7 371 SMART SM00382 23 215 2.2E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS05675 4e6a87dba951b41418aa5666e3ec39b7 371 SUPERFAMILY SSF52540 7 230 2.35E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05675 4e6a87dba951b41418aa5666e3ec39b7 371 Gene3D G3DSA:3.40.50.300 26 228 4.9E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06655 c2dce5053a31b2139d826ee491b5635a 348 SUPERFAMILY SSF47413 3 59 1.58E-15 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS06655 c2dce5053a31b2139d826ee491b5635a 348 Gene3D G3DSA:1.10.260.40 3 54 1.3E-21 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS06655 c2dce5053a31b2139d826ee491b5635a 348 Gene3D G3DSA:3.40.50.2300 55 170 3.2E-36 T 09-03-2017 NA29_RS06655 c2dce5053a31b2139d826ee491b5635a 348 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 3.3E-14 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 NA29_RS06655 c2dce5053a31b2139d826ee491b5635a 348 SUPERFAMILY SSF53822 58 312 5.72E-66 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS06655 c2dce5053a31b2139d826ee491b5635a 348 Gene3D G3DSA:3.40.50.2300 171 311 2.0E-44 T 09-03-2017 NA29_RS06655 c2dce5053a31b2139d826ee491b5635a 348 Pfam PF13377 Periplasmic binding protein-like domain 168 313 4.0E-36 T 09-03-2017 NA29_RS06655 c2dce5053a31b2139d826ee491b5635a 348 SMART SM00354 1 71 6.8E-20 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 NA29_RS05280 e0b49f9b6a018dadfc8f21a7d87e0b05 392 SMART SM00267 209 380 1.9E-46 T 09-03-2017 IPR000160 GGDEF domain NA29_RS05280 e0b49f9b6a018dadfc8f21a7d87e0b05 392 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 217 377 3.1E-41 T 09-03-2017 IPR000160 GGDEF domain NA29_RS05280 e0b49f9b6a018dadfc8f21a7d87e0b05 392 SUPERFAMILY SSF55073 225 377 1.49E-42 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS05280 e0b49f9b6a018dadfc8f21a7d87e0b05 392 Pfam PF00990 Diguanylate cyclase, GGDEF domain 220 375 1.1E-35 T 09-03-2017 IPR000160 GGDEF domain NA29_RS05280 e0b49f9b6a018dadfc8f21a7d87e0b05 392 Gene3D G3DSA:3.30.70.270 222 377 6.8E-46 T 09-03-2017 NA29_RS10355 a7700a9adfafeb01c1fa42c400a3c231 90 SUPERFAMILY SSF47729 1 90 1.41E-32 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NA29_RS10355 a7700a9adfafeb01c1fa42c400a3c231 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 09-03-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 NA29_RS10355 a7700a9adfafeb01c1fa42c400a3c231 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.9E-34 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS10355 a7700a9adfafeb01c1fa42c400a3c231 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.9E-19 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS10355 a7700a9adfafeb01c1fa42c400a3c231 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.9E-19 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS10355 a7700a9adfafeb01c1fa42c400a3c231 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.9E-19 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS10355 a7700a9adfafeb01c1fa42c400a3c231 90 Gene3D G3DSA:4.10.520.10 1 90 2.1E-37 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NA29_RS10355 a7700a9adfafeb01c1fa42c400a3c231 90 SMART SM00411 1 90 1.4E-39 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS05710 565486f6a95fa8c025659fb0935e454b 85 SUPERFAMILY SSF47027 3 83 1.44E-24 T 09-03-2017 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 NA29_RS05710 565486f6a95fa8c025659fb0935e454b 85 Pfam PF00887 Acyl CoA binding protein 5 84 3.0E-24 T 09-03-2017 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 NA29_RS05710 565486f6a95fa8c025659fb0935e454b 85 PRINTS PR00689 Acyl-coA-binding protein signature 45 60 5.8E-19 T 09-03-2017 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 NA29_RS05710 565486f6a95fa8c025659fb0935e454b 85 PRINTS PR00689 Acyl-coA-binding protein signature 66 83 5.8E-19 T 09-03-2017 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 NA29_RS05710 565486f6a95fa8c025659fb0935e454b 85 PRINTS PR00689 Acyl-coA-binding protein signature 22 40 5.8E-19 T 09-03-2017 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 NA29_RS05710 565486f6a95fa8c025659fb0935e454b 85 PRINTS PR00689 Acyl-coA-binding protein signature 5 20 5.8E-19 T 09-03-2017 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 NA29_RS05710 565486f6a95fa8c025659fb0935e454b 85 Gene3D G3DSA:1.20.80.10 1 83 8.5E-29 T 09-03-2017 IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle NA29_RS12175 6415623ca8956415c792a105d53ac46e 382 Pfam PF07687 Peptidase dimerisation domain 164 267 1.9E-12 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS12175 6415623ca8956415c792a105d53ac46e 382 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 62 71 - T 09-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 NA29_RS12175 6415623ca8956415c792a105d53ac46e 382 Pfam PF01546 Peptidase family M20/M25/M40 63 376 9.8E-26 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NA29_RS12175 6415623ca8956415c792a105d53ac46e 382 SUPERFAMILY SSF53187 4 166 6.55E-49 T 09-03-2017 NA29_RS12175 6415623ca8956415c792a105d53ac46e 382 SUPERFAMILY SSF53187 297 380 6.55E-49 T 09-03-2017 NA29_RS12175 6415623ca8956415c792a105d53ac46e 382 Gene3D G3DSA:3.30.70.360 176 265 4.1E-15 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS12175 6415623ca8956415c792a105d53ac46e 382 SUPERFAMILY SSF55031 167 266 1.79E-15 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS12175 6415623ca8956415c792a105d53ac46e 382 Gene3D G3DSA:3.40.630.10 320 381 4.5E-53 T 09-03-2017 NA29_RS12175 6415623ca8956415c792a105d53ac46e 382 Gene3D G3DSA:3.40.630.10 4 175 4.5E-53 T 09-03-2017 NA29_RS19635 344de28825eb96d39e7fe2fee4d9482d 504 Pfam PF02321 Outer membrane efflux protein 286 449 1.9E-24 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS19635 344de28825eb96d39e7fe2fee4d9482d 504 Pfam PF02321 Outer membrane efflux protein 70 261 1.7E-25 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS19635 344de28825eb96d39e7fe2fee4d9482d 504 SUPERFAMILY SSF56954 4 472 4.19E-110 T 09-03-2017 NA29_RS19635 344de28825eb96d39e7fe2fee4d9482d 504 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 470 1.6E-140 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NA29_RS19635 344de28825eb96d39e7fe2fee4d9482d 504 Gene3D G3DSA:1.20.1600.10 59 472 1.7E-110 T 09-03-2017 NA29_RS17540 75e03041cb482c8053bbdf6b0f2a8e70 503 Gene3D G3DSA:1.20.1250.20 25 204 3.5E-32 T 09-03-2017 NA29_RS17540 75e03041cb482c8053bbdf6b0f2a8e70 503 Gene3D G3DSA:1.20.1250.20 461 493 2.1E-18 T 09-03-2017 NA29_RS17540 75e03041cb482c8053bbdf6b0f2a8e70 503 Gene3D G3DSA:1.20.1250.20 275 428 2.1E-18 T 09-03-2017 NA29_RS17540 75e03041cb482c8053bbdf6b0f2a8e70 503 SUPERFAMILY SSF103473 258 430 1.57E-63 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS17540 75e03041cb482c8053bbdf6b0f2a8e70 503 SUPERFAMILY SSF103473 464 487 1.57E-63 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS17540 75e03041cb482c8053bbdf6b0f2a8e70 503 SUPERFAMILY SSF103473 22 206 1.57E-63 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS17540 75e03041cb482c8053bbdf6b0f2a8e70 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 411 430 1.2E-8 T 09-03-2017 NA29_RS17540 75e03041cb482c8053bbdf6b0f2a8e70 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 212 230 1.2E-8 T 09-03-2017 NA29_RS17540 75e03041cb482c8053bbdf6b0f2a8e70 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 146 170 1.2E-8 T 09-03-2017 NA29_RS17540 75e03041cb482c8053bbdf6b0f2a8e70 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 116 136 1.2E-8 T 09-03-2017 NA29_RS17540 75e03041cb482c8053bbdf6b0f2a8e70 503 PRINTS PR01036 Tetracycline resistance protein TetB signature 26 50 1.2E-8 T 09-03-2017 NA29_RS17540 75e03041cb482c8053bbdf6b0f2a8e70 503 Pfam PF07690 Major Facilitator Superfamily 27 420 4.9E-56 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS17540 75e03041cb482c8053bbdf6b0f2a8e70 503 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 92 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS20570 43938248ab0dfb759b2d41f69551585e 176 Pfam PF13671 AAA domain 2 131 1.7E-13 T 09-03-2017 NA29_RS20570 43938248ab0dfb759b2d41f69551585e 176 Gene3D G3DSA:3.40.50.300 2 169 2.5E-19 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20570 43938248ab0dfb759b2d41f69551585e 176 SUPERFAMILY SSF52540 1 166 1.12E-20 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01975 368e5e1779921a8f819b8733959a53a9 404 Gene3D G3DSA:2.40.160.10 259 404 3.8E-89 T 09-03-2017 IPR023614 Porin domain NA29_RS01975 368e5e1779921a8f819b8733959a53a9 404 Gene3D G3DSA:2.40.160.10 32 227 3.8E-89 T 09-03-2017 IPR023614 Porin domain NA29_RS01975 368e5e1779921a8f819b8733959a53a9 404 Pfam PF13609 Gram-negative porin 18 362 8.8E-43 T 09-03-2017 NA29_RS01975 368e5e1779921a8f819b8733959a53a9 404 SUPERFAMILY SSF56935 32 227 1.07E-73 T 09-03-2017 NA29_RS01975 368e5e1779921a8f819b8733959a53a9 404 SUPERFAMILY SSF56935 259 404 1.07E-73 T 09-03-2017 NA29_RS01975 368e5e1779921a8f819b8733959a53a9 404 PRINTS PR00184 Neisseria sp. porin signature 338 362 1.0E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS01975 368e5e1779921a8f819b8733959a53a9 404 PRINTS PR00184 Neisseria sp. porin signature 68 93 1.0E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS01975 368e5e1779921a8f819b8733959a53a9 404 PRINTS PR00184 Neisseria sp. porin signature 169 186 1.0E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS23265 871a504b0eaf6b291a8922111c0997f7 331 SUPERFAMILY SSF56349 12 307 4.12E-41 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NA29_RS23265 871a504b0eaf6b291a8922111c0997f7 331 Gene3D G3DSA:1.10.150.130 14 110 3.4E-7 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal NA29_RS23265 871a504b0eaf6b291a8922111c0997f7 331 Pfam PF00589 Phage integrase family 149 300 3.5E-16 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS23265 871a504b0eaf6b291a8922111c0997f7 331 Gene3D G3DSA:1.10.443.10 136 307 1.2E-27 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS10080 04db2496cd1601fdd93e1000897fed2d 408 Pfam PF07394 Protein of unknown function (DUF1501) 45 392 2.8E-34 T 09-03-2017 IPR010869 Protein of unknown function DUF1501 NA29_RS24680 1851586ab72f95d15d6cf813bce23998 258 SUPERFAMILY SSF56300 155 245 1.61E-29 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS24680 1851586ab72f95d15d6cf813bce23998 258 SUPERFAMILY SSF56300 2 107 1.61E-29 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS24680 1851586ab72f95d15d6cf813bce23998 258 Pfam PF00149 Calcineurin-like phosphoesterase 5 221 1.6E-9 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NA29_RS24680 1851586ab72f95d15d6cf813bce23998 258 Gene3D G3DSA:3.60.21.10 157 234 7.2E-17 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS24680 1851586ab72f95d15d6cf813bce23998 258 Gene3D G3DSA:3.60.21.10 3 71 7.2E-17 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS17505 8db5bb256eeb525f6ff2f32f9b41467e 603 Gene3D G3DSA:1.10.3720.10 350 599 1.3E-52 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS17505 8db5bb256eeb525f6ff2f32f9b41467e 603 SUPERFAMILY SSF161098 27 295 1.5E-49 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS17505 8db5bb256eeb525f6ff2f32f9b41467e 603 Gene3D G3DSA:1.10.3720.10 21 289 8.7E-46 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS17505 8db5bb256eeb525f6ff2f32f9b41467e 603 SUPERFAMILY SSF161098 350 601 1.09E-50 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS17505 8db5bb256eeb525f6ff2f32f9b41467e 603 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 421 599 5.9E-12 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS17505 8db5bb256eeb525f6ff2f32f9b41467e 603 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 287 5.9E-9 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS11660 acf08cde5f317c70d645e46e59bd397c 143 Pfam PF02627 Carboxymuconolactone decarboxylase family 14 94 1.6E-17 T 09-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS11660 acf08cde5f317c70d645e46e59bd397c 143 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 33 70 1.4E-12 T 09-03-2017 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS11660 acf08cde5f317c70d645e46e59bd397c 143 SUPERFAMILY SSF69118 6 142 4.01E-40 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS11660 acf08cde5f317c70d645e46e59bd397c 143 Gene3D G3DSA:1.20.1290.10 6 142 3.9E-46 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS20420 643589240be615a4ee1e3d7841f83a80 187 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 24 179 1.0E-61 T 09-03-2017 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 NA29_RS20420 643589240be615a4ee1e3d7841f83a80 187 Pfam PF01923 Cobalamin adenosyltransferase 8 165 5.7E-55 T 09-03-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 NA29_RS20420 643589240be615a4ee1e3d7841f83a80 187 Gene3D G3DSA:1.20.1200.10 17 181 3.3E-62 T 09-03-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 NA29_RS20420 643589240be615a4ee1e3d7841f83a80 187 SUPERFAMILY SSF89028 7 178 3.34E-58 T 09-03-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 NA29_RS20420 643589240be615a4ee1e3d7841f83a80 187 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 10 178 3.4E-59 T 09-03-2017 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 NA29_RS20760 5d9725283f05e6bc977160239a471abc 202 SUPERFAMILY SSF50475 20 169 8.13E-16 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS20760 5d9725283f05e6bc977160239a471abc 202 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 38 116 7.5E-9 T 09-03-2017 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 NA29_RS20760 5d9725283f05e6bc977160239a471abc 202 Gene3D G3DSA:2.30.110.10 21 143 3.5E-20 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS20760 5d9725283f05e6bc977160239a471abc 202 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 7 202 1.3E-59 T 09-03-2017 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent NA29_RS04465 c80e2fd28e19a8d1cd7a57146a716786 255 SUPERFAMILY SSF52096 1 252 6.36E-73 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS04465 c80e2fd28e19a8d1cd7a57146a716786 255 Gene3D G3DSA:3.90.226.10 1 252 2.7E-73 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS04465 c80e2fd28e19a8d1cd7a57146a716786 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 252 1.1E-52 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS20435 6d350574ee2aad218370b46e336e7693 289 Gene3D G3DSA:1.10.287.70 29 239 9.7E-46 T 09-03-2017 NA29_RS20435 6d350574ee2aad218370b46e336e7693 289 SUPERFAMILY SSF81324 27 239 6.07E-46 T 09-03-2017 NA29_RS20435 6d350574ee2aad218370b46e336e7693 289 PRINTS PR00169 Potassium channel signature 155 178 2.9E-31 T 09-03-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 NA29_RS20435 6d350574ee2aad218370b46e336e7693 289 PRINTS PR00169 Potassium channel signature 184 206 2.9E-31 T 09-03-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 NA29_RS20435 6d350574ee2aad218370b46e336e7693 289 PRINTS PR00169 Potassium channel signature 90 110 2.9E-31 T 09-03-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 NA29_RS20435 6d350574ee2aad218370b46e336e7693 289 PRINTS PR00169 Potassium channel signature 213 239 2.9E-31 T 09-03-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 NA29_RS20435 6d350574ee2aad218370b46e336e7693 289 PRINTS PR00169 Potassium channel signature 22 50 2.9E-31 T 09-03-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 NA29_RS20435 6d350574ee2aad218370b46e336e7693 289 PRINTS PR00169 Potassium channel signature 126 152 2.9E-31 T 09-03-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 NA29_RS20435 6d350574ee2aad218370b46e336e7693 289 PRINTS PR00169 Potassium channel signature 64 87 2.9E-31 T 09-03-2017 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 NA29_RS20435 6d350574ee2aad218370b46e336e7693 289 Pfam PF00520 Ion transport protein 29 245 1.9E-24 T 09-03-2017 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 NA29_RS02705 9cbb08919267cb1565886888f768a893 626 Pfam PF13428 Tetratricopeptide repeat 236 278 3.7E-5 T 09-03-2017 NA29_RS02705 9cbb08919267cb1565886888f768a893 626 SUPERFAMILY SSF48452 286 521 5.18E-14 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS02705 9cbb08919267cb1565886888f768a893 626 SUPERFAMILY SSF48452 451 612 1.94E-25 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS02705 9cbb08919267cb1565886888f768a893 626 Pfam PF13429 Tetratricopeptide repeat 328 607 2.9E-6 T 09-03-2017 NA29_RS02705 9cbb08919267cb1565886888f768a893 626 SMART SM00028 579 612 3.3 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS02705 9cbb08919267cb1565886888f768a893 626 SMART SM00028 236 269 3.6 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS02705 9cbb08919267cb1565886888f768a893 626 SMART SM00028 511 545 27.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS02705 9cbb08919267cb1565886888f768a893 626 SUPERFAMILY SSF48452 202 321 1.46E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS02705 9cbb08919267cb1565886888f768a893 626 Gene3D G3DSA:1.25.40.10 348 604 4.3E-36 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS02705 9cbb08919267cb1565886888f768a893 626 Gene3D G3DSA:1.25.40.10 222 347 4.7E-14 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS02705 9cbb08919267cb1565886888f768a893 626 Gene3D G3DSA:1.25.40.10 106 185 4.7E-14 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS10160 cb3b94fc2b96866dbb51e9bd4a933828 309 Pfam PF05726 Pirin C-terminal cupin domain 183 292 1.1E-16 T 09-03-2017 IPR008778 Pirin, C-terminal domain NA29_RS10160 cb3b94fc2b96866dbb51e9bd4a933828 309 PIRSF PIRSF006232 12 298 1.7E-54 T 09-03-2017 IPR012093 Pirin NA29_RS10160 cb3b94fc2b96866dbb51e9bd4a933828 309 SUPERFAMILY SSF51182 37 298 1.75E-52 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS10160 cb3b94fc2b96866dbb51e9bd4a933828 309 Pfam PF02678 Pirin 41 126 6.1E-15 T 09-03-2017 IPR003829 Pirin, N-terminal domain NA29_RS10160 cb3b94fc2b96866dbb51e9bd4a933828 309 Gene3D G3DSA:2.60.120.10 40 264 2.6E-52 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS18990 3e3f72e8c65d72b82806c67148781fcb 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 148 167 3.7E-80 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18990 3e3f72e8c65d72b82806c67148781fcb 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 57 82 3.7E-80 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18990 3e3f72e8c65d72b82806c67148781fcb 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 400 418 3.7E-80 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18990 3e3f72e8c65d72b82806c67148781fcb 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 247 263 3.7E-80 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18990 3e3f72e8c65d72b82806c67148781fcb 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 465 482 3.7E-80 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18990 3e3f72e8c65d72b82806c67148781fcb 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 277 296 3.7E-80 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18990 3e3f72e8c65d72b82806c67148781fcb 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 376 394 3.7E-80 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18990 3e3f72e8c65d72b82806c67148781fcb 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 441 456 3.7E-80 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18990 3e3f72e8c65d72b82806c67148781fcb 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 130 148 3.7E-80 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18990 3e3f72e8c65d72b82806c67148781fcb 575 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 376 400 - T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18990 3e3f72e8c65d72b82806c67148781fcb 575 Pfam PF01019 Gamma-glutamyltranspeptidase 50 568 3.2E-186 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18990 3e3f72e8c65d72b82806c67148781fcb 575 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 35 544 1.5E-173 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18990 3e3f72e8c65d72b82806c67148781fcb 575 SUPERFAMILY SSF56235 28 575 3.09E-180 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS17485 42d33e9907a56e53dcfba1401c14433c 175 SUPERFAMILY SSF50324 3 174 1.83E-66 T 09-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 NA29_RS17485 42d33e9907a56e53dcfba1401c14433c 175 Gene3D G3DSA:3.90.80.10 3 174 2.9E-59 T 09-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 NA29_RS17485 42d33e9907a56e53dcfba1401c14433c 175 Pfam PF00719 Inorganic pyrophosphatase 18 172 7.1E-51 T 09-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 NA29_RS17485 42d33e9907a56e53dcfba1401c14433c 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 34.846 T 09-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 NA29_RS17485 42d33e9907a56e53dcfba1401c14433c 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 09-03-2017 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 NA29_RS06965 faa4abb3ec1c4b166039ea99851945bf 1664 SUPERFAMILY SSF51735 1133 1332 1.58E-32 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS06965 faa4abb3ec1c4b166039ea99851945bf 1664 SUPERFAMILY SSF51735 995 1097 1.58E-32 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS06965 faa4abb3ec1c4b166039ea99851945bf 1664 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1660 0.0 T 09-03-2017 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 NA29_RS06965 faa4abb3ec1c4b166039ea99851945bf 1664 PIRSF PIRSF036761 3 1664 0.0 T 09-03-2017 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 NA29_RS06965 faa4abb3ec1c4b166039ea99851945bf 1664 Gene3D G3DSA:3.40.50.720 1154 1226 4.3E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS06965 faa4abb3ec1c4b166039ea99851945bf 1664 Gene3D G3DSA:3.40.50.720 992 1103 4.3E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS06965 faa4abb3ec1c4b166039ea99851945bf 1664 SUPERFAMILY SSF53223 815 991 3.17E-26 T 09-03-2017 NA29_RS17490 221d30dcf69e6beb39aa46b8e9f75e1d 403 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 275 281 - T 09-03-2017 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 NA29_RS17490 221d30dcf69e6beb39aa46b8e9f75e1d 403 Gene3D G3DSA:3.20.20.70 5 384 1.6E-126 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS17490 221d30dcf69e6beb39aa46b8e9f75e1d 403 SUPERFAMILY SSF51395 225 380 1.1E-93 T 09-03-2017 NA29_RS17490 221d30dcf69e6beb39aa46b8e9f75e1d 403 SUPERFAMILY SSF51395 5 196 1.1E-93 T 09-03-2017 NA29_RS17490 221d30dcf69e6beb39aa46b8e9f75e1d 403 PIRSF PIRSF000138 1 388 2.3E-125 T 09-03-2017 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 NA29_RS17490 221d30dcf69e6beb39aa46b8e9f75e1d 403 Pfam PF01070 FMN-dependent dehydrogenase 14 383 1.6E-125 T 09-03-2017 IPR000262 FMN-dependent dehydrogenase GO:0016491 NA29_RS12475 5e4301bb3c2c7977cffac53b684d9f80 451 PIRSF PIRSF006603 1 435 8.5E-93 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 NA29_RS12475 5e4301bb3c2c7977cffac53b684d9f80 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 1 401 1.0E-59 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 NA29_RS12475 5e4301bb3c2c7977cffac53b684d9f80 451 Pfam PF01554 MatE 1 158 2.2E-27 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 NA29_RS12475 5e4301bb3c2c7977cffac53b684d9f80 451 Pfam PF01554 MatE 229 390 3.5E-27 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 NA29_RS15345 375c1d271e0aac4fcc7735566ee547d8 135 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 9.8E-69 T 09-03-2017 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 NA29_RS15345 375c1d271e0aac4fcc7735566ee547d8 135 Gene3D G3DSA:3.90.1010.10 2 128 1.3E-56 T 09-03-2017 NA29_RS15345 375c1d271e0aac4fcc7735566ee547d8 135 Pfam PF01592 NifU-like N terminal domain 3 125 2.9E-56 T 09-03-2017 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 NA29_RS15345 375c1d271e0aac4fcc7735566ee547d8 135 SUPERFAMILY SSF82649 2 128 6.8E-48 T 09-03-2017 NA29_RS23660 dcbec7088c362d233454434b8e8cf6a5 911 Pfam PF00263 Bacterial type II and III secretion system protein 628 783 3.9E-46 T 09-03-2017 IPR004846 Type II/III secretion system GO:0009306 NA29_RS23660 dcbec7088c362d233454434b8e8cf6a5 911 Gene3D G3DSA:3.30.70.60 144 247 2.5E-6 T 09-03-2017 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 NA29_RS23660 dcbec7088c362d233454434b8e8cf6a5 911 PRINTS PR00811 Bacterial general secretion pathway protein D signature 624 648 3.2E-19 T 09-03-2017 IPR001775 GspD/PilQ family NA29_RS23660 dcbec7088c362d233454434b8e8cf6a5 911 PRINTS PR00811 Bacterial general secretion pathway protein D signature 516 526 3.2E-19 T 09-03-2017 IPR001775 GspD/PilQ family NA29_RS23660 dcbec7088c362d233454434b8e8cf6a5 911 PRINTS PR00811 Bacterial general secretion pathway protein D signature 771 785 3.2E-19 T 09-03-2017 IPR001775 GspD/PilQ family NA29_RS23660 dcbec7088c362d233454434b8e8cf6a5 911 PRINTS PR00811 Bacterial general secretion pathway protein D signature 748 766 3.2E-19 T 09-03-2017 IPR001775 GspD/PilQ family NA29_RS23660 dcbec7088c362d233454434b8e8cf6a5 911 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 356 783 6.7E-112 T 09-03-2017 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 NA29_RS23660 dcbec7088c362d233454434b8e8cf6a5 911 Pfam PF03958 Bacterial type II/III secretion system short domain 449 516 1.7E-10 T 09-03-2017 IPR005644 NolW-like NA29_RS23660 dcbec7088c362d233454434b8e8cf6a5 911 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 729 762 - T 09-03-2017 IPR004845 Type II secretion system GspD, conserved site GO:0008565 NA29_RS08545 e1547570ea177f68a55e7c0c19c91811 75 SUPERFAMILY SSF160582 2 66 8.11E-29 T 09-03-2017 NA29_RS08545 e1547570ea177f68a55e7c0c19c91811 75 Pfam PF03621 MbtH-like protein 2 50 6.0E-24 T 09-03-2017 IPR005153 MbtH-like protein NA29_RS08545 e1547570ea177f68a55e7c0c19c91811 75 Gene3D G3DSA:3.90.820.10 8 67 2.0E-30 T 09-03-2017 NA29_RS08545 e1547570ea177f68a55e7c0c19c91811 75 SMART SM00923 1 51 3.1E-29 T 09-03-2017 IPR005153 MbtH-like protein NA29_RS18170 795e5261c629937970782681431438ae 318 SMART SM00342 223 306 7.9E-21 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS18170 795e5261c629937970782681431438ae 318 Gene3D G3DSA:1.10.10.60 261 308 1.4E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS18170 795e5261c629937970782681431438ae 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 252 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS18170 795e5261c629937970782681431438ae 318 Pfam PF12852 Cupin 2 190 1.4E-36 T 09-03-2017 IPR032783 AraC-type transcription regulator, ligand-binding domain NA29_RS18170 795e5261c629937970782681431438ae 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 260 302 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS18170 795e5261c629937970782681431438ae 318 Gene3D G3DSA:2.60.120.280 16 82 2.8E-7 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS18170 795e5261c629937970782681431438ae 318 SUPERFAMILY SSF46689 259 310 4.35E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS18170 795e5261c629937970782681431438ae 318 Gene3D G3DSA:1.10.10.60 205 260 3.0E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS18170 795e5261c629937970782681431438ae 318 Pfam PF12833 Helix-turn-helix domain 229 307 2.4E-17 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS10325 5357344ec8a78f22ad915a01d5928471 832 Gene3D G3DSA:1.10.540.10 98 237 1.3E-32 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS10325 5357344ec8a78f22ad915a01d5928471 832 Gene3D G3DSA:2.40.110.10 240 352 1.5E-16 T 09-03-2017 NA29_RS10325 5357344ec8a78f22ad915a01d5928471 832 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 129 236 3.3E-19 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS10325 5357344ec8a78f22ad915a01d5928471 832 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 240 331 8.2E-9 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NA29_RS10325 5357344ec8a78f22ad915a01d5928471 832 SUPERFAMILY SSF47203 363 518 1.77E-29 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS10325 5357344ec8a78f22ad915a01d5928471 832 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 363 505 9.8E-18 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS10325 5357344ec8a78f22ad915a01d5928471 832 SUPERFAMILY SSF56645 124 358 1.27E-45 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NA29_RS10325 5357344ec8a78f22ad915a01d5928471 832 Gene3D G3DSA:1.20.140.10 353 508 9.9E-32 T 09-03-2017 NA29_RS10325 5357344ec8a78f22ad915a01d5928471 832 Pfam PF09317 Domain of unknown function (DUF1974) 517 807 6.9E-102 T 09-03-2017 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 NA29_RS07905 cbf5883cb6112226ccc56611efa0e1a3 410 Pfam PF04143 Sulphur transport 62 388 1.2E-74 T 09-03-2017 IPR007272 Sulphur transport domain NA29_RS10460 dc1580c8f5b9f35f5e2d8dedd25c48ba 698 SUPERFAMILY SSF51735 296 476 1.35E-55 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10460 dc1580c8f5b9f35f5e2d8dedd25c48ba 698 SUPERFAMILY SSF48179 604 696 1.28E-22 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS10460 dc1580c8f5b9f35f5e2d8dedd25c48ba 698 Gene3D G3DSA:1.10.1040.10 614 696 1.7E-13 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS10460 dc1580c8f5b9f35f5e2d8dedd25c48ba 698 Gene3D G3DSA:3.40.50.720 294 481 1.8E-57 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10460 dc1580c8f5b9f35f5e2d8dedd25c48ba 698 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 608 694 4.6E-6 T 09-03-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 NA29_RS10460 dc1580c8f5b9f35f5e2d8dedd25c48ba 698 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 480 572 2.7E-24 T 09-03-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 NA29_RS10460 dc1580c8f5b9f35f5e2d8dedd25c48ba 698 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 163 8.7E-37 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS10460 dc1580c8f5b9f35f5e2d8dedd25c48ba 698 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 300 476 5.2E-62 T 09-03-2017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 NA29_RS10460 dc1580c8f5b9f35f5e2d8dedd25c48ba 698 Gene3D G3DSA:3.90.226.10 4 282 1.3E-58 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS10460 dc1580c8f5b9f35f5e2d8dedd25c48ba 698 SUPERFAMILY SSF48179 479 621 5.02E-28 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS10460 dc1580c8f5b9f35f5e2d8dedd25c48ba 698 SUPERFAMILY SSF52096 5 291 1.47E-61 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS10460 dc1580c8f5b9f35f5e2d8dedd25c48ba 698 Gene3D G3DSA:1.10.1040.10 482 572 1.8E-20 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS25195 60b3f09731410111fa4e2b91b38d2596 549 Pfam PF00732 GMC oxidoreductase 15 306 1.5E-84 T 09-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 NA29_RS25195 60b3f09731410111fa4e2b91b38d2596 549 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 265 279 - T 09-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 NA29_RS25195 60b3f09731410111fa4e2b91b38d2596 549 SUPERFAMILY SSF54373 301 484 4.02E-60 T 09-03-2017 NA29_RS25195 60b3f09731410111fa4e2b91b38d2596 549 Gene3D G3DSA:3.50.50.60 10 137 3.1E-125 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS25195 60b3f09731410111fa4e2b91b38d2596 549 Gene3D G3DSA:3.50.50.60 198 324 3.1E-125 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS25195 60b3f09731410111fa4e2b91b38d2596 549 Gene3D G3DSA:3.50.50.60 477 544 3.1E-125 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS25195 60b3f09731410111fa4e2b91b38d2596 549 PIRSF PIRSF000137 1 548 1.7E-154 T 09-03-2017 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 NA29_RS25195 60b3f09731410111fa4e2b91b38d2596 549 SUPERFAMILY SSF51905 483 544 4.89E-93 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS25195 60b3f09731410111fa4e2b91b38d2596 549 SUPERFAMILY SSF51905 11 299 4.89E-93 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS25195 60b3f09731410111fa4e2b91b38d2596 549 Pfam PF05199 GMC oxidoreductase 398 536 1.2E-41 T 09-03-2017 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 NA29_RS25195 60b3f09731410111fa4e2b91b38d2596 549 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 92 115 - T 09-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 NA29_RS22200 462c995a6dda3f559e59e91f43f7d149 203 Gene3D G3DSA:3.40.50.1820 2 181 1.1E-16 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS22200 462c995a6dda3f559e59e91f43f7d149 203 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 186 2.4E-57 T 09-03-2017 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA NA29_RS22200 462c995a6dda3f559e59e91f43f7d149 203 SUPERFAMILY SSF53474 2 185 1.75E-20 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS21190 5495e4d26767d3b27f56456a5ae87526 439 Gene3D G3DSA:1.20.1250.20 238 418 2.2E-17 T 09-03-2017 NA29_RS21190 5495e4d26767d3b27f56456a5ae87526 439 Gene3D G3DSA:1.20.1250.20 17 178 1.8E-15 T 09-03-2017 NA29_RS21190 5495e4d26767d3b27f56456a5ae87526 439 Pfam PF07690 Major Facilitator Superfamily 19 378 2.5E-31 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS21190 5495e4d26767d3b27f56456a5ae87526 439 SUPERFAMILY SSF103473 4 182 1.01E-45 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS21190 5495e4d26767d3b27f56456a5ae87526 439 SUPERFAMILY SSF103473 223 418 1.01E-45 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS00980 1a621f83ba4ae7355258e0ff747e53ec 490 Gene3D G3DSA:1.10.10.410 433 488 1.3E-6 T 09-03-2017 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal NA29_RS00980 1a621f83ba4ae7355258e0ff747e53ec 490 SMART SM00845 335 488 1.1E-82 T 09-03-2017 IPR018027 Asn/Gln amidotransferase GO:0016884 NA29_RS00980 1a621f83ba4ae7355258e0ff747e53ec 490 Pfam PF02934 GatB/GatE catalytic domain 5 296 2.6E-112 T 09-03-2017 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 NA29_RS00980 1a621f83ba4ae7355258e0ff747e53ec 490 Pfam PF02637 GatB domain 336 488 2.6E-52 T 09-03-2017 IPR018027 Asn/Gln amidotransferase GO:0016884 NA29_RS00980 1a621f83ba4ae7355258e0ff747e53ec 490 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 488 7.6E-171 T 09-03-2017 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 NA29_RS00980 1a621f83ba4ae7355258e0ff747e53ec 490 SUPERFAMILY SSF55931 4 303 1.05E-118 T 09-03-2017 NA29_RS00980 1a621f83ba4ae7355258e0ff747e53ec 490 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 489 38.496 T 09-03-2017 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 NA29_RS00980 1a621f83ba4ae7355258e0ff747e53ec 490 SUPERFAMILY SSF89095 304 408 3.66E-32 T 09-03-2017 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 NA29_RS00980 1a621f83ba4ae7355258e0ff747e53ec 490 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 151 165 - T 09-03-2017 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 NA29_RS03360 984e3a6e9cec28a504aae680ae4afd90 315 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 280 2.0E-43 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NA29_RS03360 984e3a6e9cec28a504aae680ae4afd90 315 Gene3D G3DSA:3.40.50.720 99 281 2.9E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS03360 984e3a6e9cec28a504aae680ae4afd90 315 SUPERFAMILY SSF52283 39 128 1.5E-6 T 09-03-2017 NA29_RS03360 984e3a6e9cec28a504aae680ae4afd90 315 SUPERFAMILY SSF51735 100 281 6.33E-46 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS19515 cc54b34506b247641e1b9d2a98448700 354 SUPERFAMILY SSF51735 2 350 5.12E-90 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS19515 cc54b34506b247641e1b9d2a98448700 354 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 337 1.2E-151 T 09-03-2017 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 NA29_RS19515 cc54b34506b247641e1b9d2a98448700 354 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS19515 cc54b34506b247641e1b9d2a98448700 354 Gene3D G3DSA:3.90.25.10 191 347 1.6E-54 T 09-03-2017 NA29_RS19515 cc54b34506b247641e1b9d2a98448700 354 Gene3D G3DSA:3.40.50.720 2 190 5.9E-64 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS19515 cc54b34506b247641e1b9d2a98448700 354 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 323 2.4E-100 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10770 b15e0b1db4b5ddc8a724bc4996f98a4f 259 SUPERFAMILY SSF52540 3 240 1.55E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10770 b15e0b1db4b5ddc8a724bc4996f98a4f 259 Gene3D G3DSA:3.40.50.300 4 239 6.5E-25 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10770 b15e0b1db4b5ddc8a724bc4996f98a4f 259 Pfam PF06564 Cellulose biosynthesis protein BcsQ 3 238 3.4E-19 T 09-03-2017 IPR017746 Cellulose synthase operon protein BcsQ NA29_RS03835 c9c34993fa7ae15ff5c84d651367ad18 307 Gene3D G3DSA:3.40.190.10 88 184 4.3E-11 T 09-03-2017 NA29_RS03835 c9c34993fa7ae15ff5c84d651367ad18 307 Gene3D G3DSA:3.40.190.10 185 258 1.2E-4 T 09-03-2017 NA29_RS03835 c9c34993fa7ae15ff5c84d651367ad18 307 Gene3D G3DSA:1.10.10.10 2 86 1.6E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03835 c9c34993fa7ae15ff5c84d651367ad18 307 SUPERFAMILY SSF53850 90 290 1.99E-24 T 09-03-2017 NA29_RS03835 c9c34993fa7ae15ff5c84d651367ad18 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03835 c9c34993fa7ae15ff5c84d651367ad18 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03835 c9c34993fa7ae15ff5c84d651367ad18 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03835 c9c34993fa7ae15ff5c84d651367ad18 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.7E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03835 c9c34993fa7ae15ff5c84d651367ad18 307 Pfam PF03466 LysR substrate binding domain 87 288 2.9E-25 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS03835 c9c34993fa7ae15ff5c84d651367ad18 307 SUPERFAMILY SSF46785 3 86 2.79E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00960 b432be147e156e7745e0c9be6f6650ea 347 SUPERFAMILY SSF53067 9 153 5.76E-38 T 09-03-2017 NA29_RS00960 b432be147e156e7745e0c9be6f6650ea 347 SUPERFAMILY SSF53067 154 339 1.89E-48 T 09-03-2017 NA29_RS00960 b432be147e156e7745e0c9be6f6650ea 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 2.5E-63 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 NA29_RS00960 b432be147e156e7745e0c9be6f6650ea 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 2.5E-63 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 NA29_RS00960 b432be147e156e7745e0c9be6f6650ea 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 2.5E-63 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 NA29_RS00960 b432be147e156e7745e0c9be6f6650ea 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 2.5E-63 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 NA29_RS00960 b432be147e156e7745e0c9be6f6650ea 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 2.5E-63 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 NA29_RS00960 b432be147e156e7745e0c9be6f6650ea 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 8.4E-156 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 NA29_RS00960 b432be147e156e7745e0c9be6f6650ea 347 Gene3D G3DSA:3.30.420.40 165 191 3.1E-33 T 09-03-2017 NA29_RS00960 b432be147e156e7745e0c9be6f6650ea 347 Gene3D G3DSA:3.30.420.40 268 322 3.1E-33 T 09-03-2017 NA29_RS00960 b432be147e156e7745e0c9be6f6650ea 347 Gene3D G3DSA:3.30.420.40 10 164 3.8E-46 T 09-03-2017 NA29_RS00960 b432be147e156e7745e0c9be6f6650ea 347 Pfam PF06723 MreB/Mbl protein 10 340 2.9E-150 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 NA29_RS00960 b432be147e156e7745e0c9be6f6650ea 347 Gene3D G3DSA:3.90.640.10 192 264 2.3E-30 T 09-03-2017 NA29_RS15755 fdb254c1327449b5553902f975257a5d 162 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 2.0E-20 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS15755 fdb254c1327449b5553902f975257a5d 162 SMART SM00344 11 120 2.5E-45 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NA29_RS15755 fdb254c1327449b5553902f975257a5d 162 Gene3D G3DSA:3.30.70.920 63 159 6.3E-33 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS15755 fdb254c1327449b5553902f975257a5d 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 1.8E-18 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS15755 fdb254c1327449b5553902f975257a5d 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 1.8E-18 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS15755 fdb254c1327449b5553902f975257a5d 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 1.8E-18 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS15755 fdb254c1327449b5553902f975257a5d 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 57 3.2E-19 T 09-03-2017 NA29_RS15755 fdb254c1327449b5553902f975257a5d 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 09-03-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NA29_RS15755 fdb254c1327449b5553902f975257a5d 162 Gene3D G3DSA:1.10.10.10 11 61 2.8E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15755 fdb254c1327449b5553902f975257a5d 162 SUPERFAMILY SSF46785 10 70 4.61E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15755 fdb254c1327449b5553902f975257a5d 162 SUPERFAMILY SSF54909 73 158 1.15E-20 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS03805 fd3390e4347476ed1a2cd2d16e8bb180 511 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 16 503 7.1E-184 T 09-03-2017 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 NA29_RS03805 fd3390e4347476ed1a2cd2d16e8bb180 511 SUPERFAMILY SSF74650 16 388 7.53E-153 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NA29_RS03805 fd3390e4347476ed1a2cd2d16e8bb180 511 Gene3D G3DSA:2.60.40.10 396 505 8.0E-33 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS03805 fd3390e4347476ed1a2cd2d16e8bb180 511 PIRSF PIRSF006281 2 507 1.9E-209 T 09-03-2017 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D NA29_RS03805 fd3390e4347476ed1a2cd2d16e8bb180 511 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 2 505 55.279 T 09-03-2017 IPR023704 Glucan biosynthesis protein G NA29_RS03805 fd3390e4347476ed1a2cd2d16e8bb180 511 Gene3D G3DSA:2.70.98.10 15 388 1.5E-159 T 09-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 NA29_RS03805 fd3390e4347476ed1a2cd2d16e8bb180 511 SUPERFAMILY SSF81296 395 505 1.82E-26 T 09-03-2017 IPR014756 Immunoglobulin E-set NA29_RS10985 fc571066840d8315fff22055415ba80e 284 Pfam PF13460 NAD(P)H-binding 6 191 2.1E-18 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10985 fc571066840d8315fff22055415ba80e 284 SUPERFAMILY SSF51735 3 241 4.31E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10985 fc571066840d8315fff22055415ba80e 284 Gene3D G3DSA:3.40.50.720 2 223 9.3E-35 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS21950 8b050b83057ef1c0e95ce1196eea9a7d 258 Pfam PF01553 Acyltransferase 60 184 2.9E-22 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 NA29_RS21950 8b050b83057ef1c0e95ce1196eea9a7d 258 Gene3D G3DSA:3.40.1130.10 65 232 6.6E-25 T 09-03-2017 NA29_RS21950 8b050b83057ef1c0e95ce1196eea9a7d 258 SUPERFAMILY SSF69593 5 230 3.4E-42 T 09-03-2017 NA29_RS21950 8b050b83057ef1c0e95ce1196eea9a7d 258 SMART SM00563 72 187 4.3E-29 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 NA29_RS00395 d64e16ac1cd9fe87251bae9d9a3a00aa 303 SUPERFAMILY SSF103481 196 296 1.31E-10 T 09-03-2017 NA29_RS00395 d64e16ac1cd9fe87251bae9d9a3a00aa 303 Pfam PF00892 EamA-like transporter family 162 292 1.9E-10 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS00395 d64e16ac1cd9fe87251bae9d9a3a00aa 303 Pfam PF00892 EamA-like transporter family 16 151 2.1E-11 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS00395 d64e16ac1cd9fe87251bae9d9a3a00aa 303 SUPERFAMILY SSF103481 73 154 1.09E-9 T 09-03-2017 NA29_RS20545 c0e3fe52688aa7d2bbe86cbf307cf1ad 303 Gene3D G3DSA:3.40.50.1820 28 303 1.9E-64 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS20545 c0e3fe52688aa7d2bbe86cbf307cf1ad 303 PRINTS PR00412 Epoxide hydrolase signature 120 133 8.6E-6 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS20545 c0e3fe52688aa7d2bbe86cbf307cf1ad 303 PRINTS PR00412 Epoxide hydrolase signature 279 301 8.6E-6 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS20545 c0e3fe52688aa7d2bbe86cbf307cf1ad 303 PRINTS PR00412 Epoxide hydrolase signature 57 75 8.6E-6 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS20545 c0e3fe52688aa7d2bbe86cbf307cf1ad 303 PRINTS PR00412 Epoxide hydrolase signature 134 147 8.6E-6 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS20545 c0e3fe52688aa7d2bbe86cbf307cf1ad 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 134 147 9.0E-8 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS20545 c0e3fe52688aa7d2bbe86cbf307cf1ad 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 76 91 9.0E-8 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS20545 c0e3fe52688aa7d2bbe86cbf307cf1ad 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 9.0E-8 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS20545 c0e3fe52688aa7d2bbe86cbf307cf1ad 303 SUPERFAMILY SSF53474 28 303 7.95E-64 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS20545 c0e3fe52688aa7d2bbe86cbf307cf1ad 303 Pfam PF12697 Alpha/beta hydrolase family 53 294 3.0E-24 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS11045 a21226cb1ecbf226161fb8cee37d2981 354 Pfam PF04972 BON domain 227 292 1.8E-11 T 09-03-2017 IPR007055 BON domain NA29_RS18240 3d7bf51e28457d26fbeb3288475c6db6 293 PRINTS PR00412 Epoxide hydrolase signature 112 125 4.6E-5 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS18240 3d7bf51e28457d26fbeb3288475c6db6 293 PRINTS PR00412 Epoxide hydrolase signature 67 82 4.6E-5 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS18240 3d7bf51e28457d26fbeb3288475c6db6 293 PRINTS PR00412 Epoxide hydrolase signature 126 139 4.6E-5 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS18240 3d7bf51e28457d26fbeb3288475c6db6 293 PRINTS PR00412 Epoxide hydrolase signature 262 284 4.6E-5 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS18240 3d7bf51e28457d26fbeb3288475c6db6 293 Pfam PF00561 alpha/beta hydrolase fold 43 272 8.2E-19 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS18240 3d7bf51e28457d26fbeb3288475c6db6 293 PRINTS PR00111 Alpha/beta hydrolase fold signature 232 246 1.4E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS18240 3d7bf51e28457d26fbeb3288475c6db6 293 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 1.4E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS18240 3d7bf51e28457d26fbeb3288475c6db6 293 PRINTS PR00111 Alpha/beta hydrolase fold signature 67 82 1.4E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS18240 3d7bf51e28457d26fbeb3288475c6db6 293 PRINTS PR00111 Alpha/beta hydrolase fold signature 126 139 1.4E-6 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS18240 3d7bf51e28457d26fbeb3288475c6db6 293 Gene3D G3DSA:3.40.50.1820 15 286 4.9E-49 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS18240 3d7bf51e28457d26fbeb3288475c6db6 293 SUPERFAMILY SSF53474 16 287 1.49E-48 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS04410 bd4a5c1b8de4a51c56ea94f026b8db06 216 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 30 215 9.8E-35 T 09-03-2017 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 NA29_RS04410 bd4a5c1b8de4a51c56ea94f026b8db06 216 SUPERFAMILY SSF53335 29 215 6.29E-41 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS04410 bd4a5c1b8de4a51c56ea94f026b8db06 216 Gene3D G3DSA:3.40.50.150 43 215 3.3E-38 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS17500 e3f3584d11c9cffeca1d72fcb56aa5a3 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 136 153 4.8E-18 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS17500 e3f3584d11c9cffeca1d72fcb56aa5a3 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 79 97 4.8E-18 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS17500 e3f3584d11c9cffeca1d72fcb56aa5a3 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 111 127 4.8E-18 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS17500 e3f3584d11c9cffeca1d72fcb56aa5a3 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 4.8E-18 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS17500 e3f3584d11c9cffeca1d72fcb56aa5a3 303 SUPERFAMILY SSF51569 4 294 4.4E-80 T 09-03-2017 NA29_RS17500 e3f3584d11c9cffeca1d72fcb56aa5a3 303 Pfam PF00701 Dihydrodipicolinate synthetase family 7 290 5.8E-65 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS17500 e3f3584d11c9cffeca1d72fcb56aa5a3 303 Gene3D G3DSA:3.20.20.70 3 295 2.7E-85 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS17500 e3f3584d11c9cffeca1d72fcb56aa5a3 303 PIRSF PIRSF001365 2 301 8.5E-72 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS17500 e3f3584d11c9cffeca1d72fcb56aa5a3 303 SMART SM01130 6 297 1.4E-90 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS19260 9e106a174c76c9a9891593194c2bad24 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.9E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19260 9e106a174c76c9a9891593194c2bad24 317 SUPERFAMILY SSF53850 90 299 1.86E-42 T 09-03-2017 NA29_RS19260 9e106a174c76c9a9891593194c2bad24 317 Gene3D G3DSA:1.10.10.10 3 85 5.2E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19260 9e106a174c76c9a9891593194c2bad24 317 SUPERFAMILY SSF46785 3 112 5.97E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19260 9e106a174c76c9a9891593194c2bad24 317 Gene3D G3DSA:3.40.190.10 170 264 3.4E-21 T 09-03-2017 NA29_RS19260 9e106a174c76c9a9891593194c2bad24 317 Gene3D G3DSA:3.40.190.10 88 169 2.2E-5 T 09-03-2017 NA29_RS19260 9e106a174c76c9a9891593194c2bad24 317 Pfam PF03466 LysR substrate binding domain 88 294 2.2E-41 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS20930 9a5b50d07521c05a3085fc279cba2af1 199 SUPERFAMILY SSF88659 124 187 2.24E-18 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS20930 9a5b50d07521c05a3085fc279cba2af1 199 Pfam PF04542 Sigma-70 region 2 25 92 3.4E-20 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS20930 9a5b50d07521c05a3085fc279cba2af1 199 Gene3D G3DSA:1.10.1740.10 4 113 8.5E-39 T 09-03-2017 NA29_RS20930 9a5b50d07521c05a3085fc279cba2af1 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 186 3.1E-35 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS20930 9a5b50d07521c05a3085fc279cba2af1 199 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 191 2.0E-98 T 09-03-2017 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS20930 9a5b50d07521c05a3085fc279cba2af1 199 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 09-03-2017 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS20930 9a5b50d07521c05a3085fc279cba2af1 199 Gene3D G3DSA:1.10.10.10 125 189 1.9E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20930 9a5b50d07521c05a3085fc279cba2af1 199 Pfam PF08281 Sigma-70, region 4 133 182 2.6E-18 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS20930 9a5b50d07521c05a3085fc279cba2af1 199 SUPERFAMILY SSF88946 4 107 2.51E-32 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 Gene3D G3DSA:1.10.730.10 475 587 1.3E-46 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 143 159 4.7E-21 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 128 143 4.7E-21 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 316 337 4.7E-21 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 PRINTS PR01038 Arginyl-tRNA synthetase signature 167 180 4.7E-21 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 Gene3D G3DSA:3.30.1360.70 15 116 1.7E-27 T 09-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 SUPERFAMILY SSF52374 128 480 7.78E-78 T 09-03-2017 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 SMART SM00836 470 587 5.2E-54 T 09-03-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 587 24.95 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 138 147 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 SMART SM01016 7 98 3.8E-32 T 09-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 27 98 1.7E-21 T 09-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 Pfam PF00750 tRNA synthetases class I (R) 112 410 3.9E-19 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 Gene3D G3DSA:3.40.50.620 127 474 7.6E-105 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 Pfam PF05746 DALR anticodon binding domain 470 587 3.4E-38 T 09-03-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 SUPERFAMILY SSF47323 465 587 4.25E-38 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 32 587 4.6E-122 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 NA29_RS02100 12c5d43b2cce255010c2ced5936c7aeb 587 SUPERFAMILY SSF55190 11 118 1.96E-20 T 09-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 NA29_RS00835 fb560bc52f0ce0397094dab38c93ee78 434 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 144 353 1.5E-66 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS00835 fb560bc52f0ce0397094dab38c93ee78 434 Gene3D G3DSA:3.40.50.300 121 390 7.2E-80 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00835 fb560bc52f0ce0397094dab38c93ee78 434 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 14 433 8.2E-119 T 09-03-2017 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS00835 fb560bc52f0ce0397094dab38c93ee78 434 SUPERFAMILY SSF52540 87 357 3.99E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00835 fb560bc52f0ce0397094dab38c93ee78 434 SMART SM00382 156 337 4.4E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS00835 fb560bc52f0ce0397094dab38c93ee78 434 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 344 353 - T 09-03-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 SUPERFAMILY SSF56712 3 619 7.59E-171 T 09-03-2017 IPR023405 DNA topoisomerase, type IA, core domain NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 Pfam PF01751 Toprim domain 5 132 7.9E-11 T 09-03-2017 IPR006171 Toprim domain NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 SMART SM00437 279 566 5.7E-74 T 09-03-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 Gene3D G3DSA:1.10.290.10 290 417 5.8E-41 T 09-03-2017 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 Pfam PF01131 DNA topoisomerase 156 604 1.3E-114 T 09-03-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 4.7E-27 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 404 420 4.7E-27 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 4.7E-27 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 529 543 4.7E-27 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 4.7E-27 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 628 8.0E-174 T 09-03-2017 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 Pfam PF13342 C-terminal repeat of topoisomerase 655 718 1.9E-20 T 09-03-2017 IPR025589 Topoisomerase C-terminal repeat NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 Pfam PF13342 C-terminal repeat of topoisomerase 765 825 9.7E-20 T 09-03-2017 IPR025589 Topoisomerase C-terminal repeat NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 331 - T 09-03-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 Gene3D G3DSA:1.10.460.10 499 620 4.6E-52 T 09-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 Gene3D G3DSA:1.10.460.10 156 215 4.6E-52 T 09-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 SMART SM00493 3 126 4.7E-14 T 09-03-2017 IPR006171 Toprim domain NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 Gene3D G3DSA:3.40.50.140 4 151 7.2E-43 T 09-03-2017 IPR006171 Toprim domain NA29_RS00695 eb762e6eba4cb6e23c76616e2d260dce 902 SMART SM00436 126 221 1.1E-21 T 09-03-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 469 59.893 T 09-03-2017 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 SUPERFAMILY SSF53732 2 468 7.85E-163 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 467 3.8E-235 T 09-03-2017 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 Gene3D G3DSA:3.30.499.10 293 303 2.8E-60 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 Gene3D G3DSA:3.30.499.10 335 468 2.8E-60 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 Pfam PF00330 Aconitase family (aconitate hydratase) 7 460 1.2E-155 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 Gene3D G3DSA:3.30.499.10 3 161 3.9E-20 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 ProSitePatterns PS01244 Aconitase family signature 2. 402 415 - T 09-03-2017 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 Gene3D G3DSA:3.40.1060.10 167 281 6.3E-38 T 09-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 PRINTS PR00415 Aconitase family signature 108 116 5.3E-49 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 PRINTS PR00415 Aconitase family signature 195 208 5.3E-49 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 PRINTS PR00415 Aconitase family signature 133 148 5.3E-49 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 PRINTS PR00415 Aconitase family signature 209 222 5.3E-49 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 PRINTS PR00415 Aconitase family signature 119 132 5.3E-49 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 PRINTS PR00415 Aconitase family signature 343 354 5.3E-49 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 PRINTS PR00415 Aconitase family signature 402 415 5.3E-49 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 PRINTS PR00415 Aconitase family signature 82 95 5.3E-49 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14820 703d9bb9af8931422928f10a4a0b73b1 469 PRINTS PR00415 Aconitase family signature 286 300 5.3E-49 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS21635 2875dd5a312091101f053f716e8d4184 342 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 2 266 45.263 T 09-03-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 NA29_RS21635 2875dd5a312091101f053f716e8d4184 342 Gene3D G3DSA:3.60.21.10 2 128 8.0E-48 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS21635 2875dd5a312091101f053f716e8d4184 342 Gene3D G3DSA:3.60.21.10 165 266 8.0E-48 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS21635 2875dd5a312091101f053f716e8d4184 342 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 4 255 2.9E-80 T 09-03-2017 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 NA29_RS21635 2875dd5a312091101f053f716e8d4184 342 SUPERFAMILY SSF56300 3 269 1.07E-50 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS21635 2875dd5a312091101f053f716e8d4184 342 Pfam PF00149 Calcineurin-like phosphoesterase 4 162 1.2E-10 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NA29_RS20890 0ec4ba9fe822aeeb20fbb7c3720d9b35 297 Gene3D G3DSA:3.40.50.300 8 192 6.1E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20890 0ec4ba9fe822aeeb20fbb7c3720d9b35 297 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 80 98 1.2E-7 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS20890 0ec4ba9fe822aeeb20fbb7c3720d9b35 297 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 12 32 1.2E-7 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS20890 0ec4ba9fe822aeeb20fbb7c3720d9b35 297 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 167 8.2E-29 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 NA29_RS20890 0ec4ba9fe822aeeb20fbb7c3720d9b35 297 SUPERFAMILY SSF54814 182 297 5.17E-38 T 09-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 NA29_RS20890 0ec4ba9fe822aeeb20fbb7c3720d9b35 297 Gene3D G3DSA:3.30.300.20 193 292 5.1E-34 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta NA29_RS20890 0ec4ba9fe822aeeb20fbb7c3720d9b35 297 Hamap MF_00367 GTPase Era [era]. 7 296 33.883 T 09-03-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 NA29_RS20890 0ec4ba9fe822aeeb20fbb7c3720d9b35 297 Pfam PF01926 50S ribosome-binding GTPase 12 125 1.2E-24 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS20890 0ec4ba9fe822aeeb20fbb7c3720d9b35 297 Pfam PF07650 KH domain 209 284 1.2E-14 T 09-03-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS20890 0ec4ba9fe822aeeb20fbb7c3720d9b35 297 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 279 3.3E-83 T 09-03-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 NA29_RS20890 0ec4ba9fe822aeeb20fbb7c3720d9b35 297 SUPERFAMILY SSF52540 11 206 1.66E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20390 db85029434a26ec9bc98e10215c837a1 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 512 2.1E-18 T 09-03-2017 IPR003395 RecF/RecN/SMC, N-terminal NA29_RS20390 db85029434a26ec9bc98e10215c837a1 554 SUPERFAMILY SSF52540 276 506 1.08E-28 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20390 db85029434a26ec9bc98e10215c837a1 554 SUPERFAMILY SSF52540 3 50 1.08E-28 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20390 db85029434a26ec9bc98e10215c837a1 554 Gene3D G3DSA:3.40.50.300 1 210 4.5E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20390 db85029434a26ec9bc98e10215c837a1 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 553 5.4E-154 T 09-03-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 NA29_RS20390 db85029434a26ec9bc98e10215c837a1 554 Gene3D G3DSA:3.40.50.300 432 499 3.0E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20390 db85029434a26ec9bc98e10215c837a1 554 PIRSF PIRSF003128 1 554 1.4E-157 T 09-03-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 NA29_RS20390 db85029434a26ec9bc98e10215c837a1 554 SUPERFAMILY SSF52540 1 221 1.81E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS04300 a053d46b18c42d5381cf0d2102ba1c35 171 SUPERFAMILY SSF46785 6 138 4.62E-30 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04300 a053d46b18c42d5381cf0d2102ba1c35 171 SMART SM00347 23 123 7.0E-19 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS04300 a053d46b18c42d5381cf0d2102ba1c35 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 4.8E-8 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS04300 a053d46b18c42d5381cf0d2102ba1c35 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 4.8E-8 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS04300 a053d46b18c42d5381cf0d2102ba1c35 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 4.8E-8 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS04300 a053d46b18c42d5381cf0d2102ba1c35 171 Pfam PF01047 MarR family 32 86 4.6E-12 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS04300 a053d46b18c42d5381cf0d2102ba1c35 171 Gene3D G3DSA:1.10.10.10 4 137 8.7E-33 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20945 063fa96ab5e3d153d7023d89cc32edf0 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 9.5E-15 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20945 063fa96ab5e3d153d7023d89cc32edf0 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 9.5E-15 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20945 063fa96ab5e3d153d7023d89cc32edf0 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 9.5E-15 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20945 063fa96ab5e3d153d7023d89cc32edf0 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 220 5.9E-6 T 09-03-2017 NA29_RS20945 063fa96ab5e3d153d7023d89cc32edf0 249 Gene3D G3DSA:3.40.50.720 2 248 5.1E-92 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS20945 063fa96ab5e3d153d7023d89cc32edf0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.1E-52 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20945 063fa96ab5e3d153d7023d89cc32edf0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.1E-52 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20945 063fa96ab5e3d153d7023d89cc32edf0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.1E-52 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20945 063fa96ab5e3d153d7023d89cc32edf0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.1E-52 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20945 063fa96ab5e3d153d7023d89cc32edf0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.1E-52 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20945 063fa96ab5e3d153d7023d89cc32edf0 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.1E-52 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS20945 063fa96ab5e3d153d7023d89cc32edf0 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS20945 063fa96ab5e3d153d7023d89cc32edf0 249 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 246 2.3E-104 T 09-03-2017 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NA29_RS20945 063fa96ab5e3d153d7023d89cc32edf0 249 SUPERFAMILY SSF51735 7 248 8.36E-89 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS20945 063fa96ab5e3d153d7023d89cc32edf0 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 4.1E-71 T 09-03-2017 NA29_RS13385 e9185e79f13c0b4b0b58233b48796abe 312 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 6 308 3.2E-120 T 09-03-2017 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 NA29_RS13385 e9185e79f13c0b4b0b58233b48796abe 312 SUPERFAMILY SSF53474 2 293 7.54E-59 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS13385 e9185e79f13c0b4b0b58233b48796abe 312 Gene3D G3DSA:3.40.50.1820 5 293 2.0E-66 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS13385 e9185e79f13c0b4b0b58233b48796abe 312 PIRSF PIRSF006431 1 311 3.7E-133 T 09-03-2017 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 NA29_RS13385 e9185e79f13c0b4b0b58233b48796abe 312 Pfam PF00561 alpha/beta hydrolase fold 35 291 2.7E-26 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS13385 e9185e79f13c0b4b0b58233b48796abe 312 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 34 42 1.4E-13 T 09-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 NA29_RS13385 e9185e79f13c0b4b0b58233b48796abe 312 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 103 117 1.4E-13 T 09-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 NA29_RS13385 e9185e79f13c0b4b0b58233b48796abe 312 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 60 71 1.4E-13 T 09-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 NA29_RS07945 db22ca6ef6bd545994b0df16beb5ff14 371 Pfam PF00355 Rieske [2Fe-2S] domain 49 123 2.8E-10 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS07945 db22ca6ef6bd545994b0df16beb5ff14 371 SUPERFAMILY SSF50022 8 144 1.01E-31 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS07945 db22ca6ef6bd545994b0df16beb5ff14 371 Gene3D G3DSA:2.102.10.10 42 140 6.9E-23 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS07945 db22ca6ef6bd545994b0df16beb5ff14 371 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 172 368 8.1E-33 T 09-03-2017 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 NA29_RS07945 db22ca6ef6bd545994b0df16beb5ff14 371 SUPERFAMILY SSF55961 165 369 8.63E-41 T 09-03-2017 NA29_RS07945 db22ca6ef6bd545994b0df16beb5ff14 371 Gene3D G3DSA:3.90.380.10 141 365 6.9E-7 T 09-03-2017 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 NA29_RS00940 013814979092d29bc7823c6912d52f90 382 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 335 359 - T 09-03-2017 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 NA29_RS00940 013814979092d29bc7823c6912d52f90 382 Pfam PF01098 Cell cycle protein 24 378 8.1E-100 T 09-03-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 NA29_RS00940 013814979092d29bc7823c6912d52f90 382 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 377 5.9E-126 T 09-03-2017 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 NA29_RS09750 532dda32c071c567129872c2967ccbaf 952 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 11 940 0.0 T 09-03-2017 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NA29_RS09750 532dda32c071c567129872c2967ccbaf 952 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 799 941 1.9E-51 T 09-03-2017 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NA29_RS09750 532dda32c071c567129872c2967ccbaf 952 Gene3D G3DSA:3.40.50.970 646 802 3.9E-22 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS09750 532dda32c071c567129872c2967ccbaf 952 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 9 46 2.9E-17 T 09-03-2017 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NA29_RS09750 532dda32c071c567129872c2967ccbaf 952 Pfam PF00676 Dehydrogenase E1 component 217 519 2.9E-47 T 09-03-2017 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 NA29_RS09750 532dda32c071c567129872c2967ccbaf 952 SUPERFAMILY SSF52518 123 549 1.05E-86 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS09750 532dda32c071c567129872c2967ccbaf 952 SUPERFAMILY SSF52518 580 801 1.99E-49 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS09750 532dda32c071c567129872c2967ccbaf 952 SMART SM00861 597 794 2.8E-59 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain NA29_RS09750 532dda32c071c567129872c2967ccbaf 952 Gene3D G3DSA:3.40.50.970 164 520 1.9E-69 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS09750 532dda32c071c567129872c2967ccbaf 952 Pfam PF02779 Transketolase, pyrimidine binding domain 596 795 6.5E-65 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain NA29_RS09750 532dda32c071c567129872c2967ccbaf 952 PIRSF PIRSF000157 1 943 0.0 T 09-03-2017 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 NA29_RS19225 dec769876515d9595b5a4b939c44aa6b 69 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 2.6E-24 T 09-03-2017 IPR012451 Protein of unknown function DUF1656 NA29_RS04010 3d99c611a641a93d17d70fcd2e5613b0 253 Gene3D G3DSA:3.90.226.10 4 246 4.4E-64 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS04010 3d99c611a641a93d17d70fcd2e5613b0 253 SUPERFAMILY SSF52096 4 244 2.03E-65 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS04010 3d99c611a641a93d17d70fcd2e5613b0 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 236 1.8E-46 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS05785 650782ae994e4282ebaddac3210d1b9c 172 SMART SM00903 20 167 3.3E-66 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS05785 650782ae994e4282ebaddac3210d1b9c 172 SUPERFAMILY SSF50475 11 167 6.87E-49 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS05785 650782ae994e4282ebaddac3210d1b9c 172 Pfam PF01613 Flavin reductase like domain 21 167 1.4E-35 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS05785 650782ae994e4282ebaddac3210d1b9c 172 Gene3D G3DSA:2.30.110.10 8 166 4.8E-60 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS15370 0505042b88e798237a29c3674a173967 695 Gene3D G3DSA:3.30.2060.10 177 248 1.5E-10 T 09-03-2017 NA29_RS15370 0505042b88e798237a29c3674a173967 695 Hamap MF_00204 UvrABC system protein B [uvrB]. 20 679 43.042 T 09-03-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 NA29_RS15370 0505042b88e798237a29c3674a173967 695 SMART SM00490 476 562 3.8E-19 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS15370 0505042b88e798237a29c3674a173967 695 SUPERFAMILY SSF52540 54 99 2.99E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15370 0505042b88e798237a29c3674a173967 695 SUPERFAMILY SSF52540 475 601 2.99E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15370 0505042b88e798237a29c3674a173967 695 Pfam PF12344 Ultra-violet resistance protein B 568 610 1.2E-22 T 09-03-2017 IPR024759 UvrB, YAD/RRR-motif-containing domain NA29_RS15370 0505042b88e798237a29c3674a173967 695 SMART SM00487 26 442 4.5E-25 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain NA29_RS15370 0505042b88e798237a29c3674a173967 695 Pfam PF00271 Helicase conserved C-terminal domain 451 561 2.5E-19 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS15370 0505042b88e798237a29c3674a173967 695 Pfam PF04851 Type III restriction enzyme, res subunit 34 155 1.6E-8 T 09-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 NA29_RS15370 0505042b88e798237a29c3674a173967 695 Pfam PF02151 UvrB/uvrC motif 645 678 2.6E-10 T 09-03-2017 IPR001943 UVR domain GO:0005515 NA29_RS15370 0505042b88e798237a29c3674a173967 695 Gene3D G3DSA:3.40.50.300 435 595 7.2E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15370 0505042b88e798237a29c3674a173967 695 SUPERFAMILY SSF46600 633 680 4.45E-12 T 09-03-2017 IPR001943 UVR domain GO:0005515 NA29_RS15370 0505042b88e798237a29c3674a173967 695 Gene3D G3DSA:3.40.50.300 295 355 1.1E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15370 0505042b88e798237a29c3674a173967 695 Gene3D G3DSA:3.40.50.300 405 426 1.1E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15370 0505042b88e798237a29c3674a173967 695 Gene3D G3DSA:3.40.50.300 24 106 1.1E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15370 0505042b88e798237a29c3674a173967 695 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 22 676 0.0 T 09-03-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 NA29_RS15370 0505042b88e798237a29c3674a173967 695 SUPERFAMILY SSF52540 21 431 9.5E-132 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15370 0505042b88e798237a29c3674a173967 695 Gene3D G3DSA:4.10.860.10 639 682 3.6E-17 T 09-03-2017 IPR001943 UVR domain GO:0005515 NA29_RS02800 ef56a215a6b702bba20e1988a0970def 322 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 10 247 3.9E-79 T 09-03-2017 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 NA29_RS02800 ef56a215a6b702bba20e1988a0970def 322 SUPERFAMILY SSF53850 46 250 6.08E-35 T 09-03-2017 NA29_RS02800 ef56a215a6b702bba20e1988a0970def 322 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 27 273 1.8E-66 T 09-03-2017 NA29_RS02800 ef56a215a6b702bba20e1988a0970def 322 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 8 286 3.3E-101 T 09-03-2017 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 NA29_RS02800 ef56a215a6b702bba20e1988a0970def 322 Gene3D G3DSA:3.40.190.10 111 222 2.2E-6 T 09-03-2017 NA29_RS18375 b08091ac8825a066de57c0921f3a27b7 200 SUPERFAMILY SSF48317 4 174 1.7E-27 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NA29_RS18375 b08091ac8825a066de57c0921f3a27b7 200 Gene3D G3DSA:1.20.144.10 3 170 1.3E-21 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NA29_RS18375 b08091ac8825a066de57c0921f3a27b7 200 Pfam PF01569 PAP2 superfamily 59 168 2.5E-16 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NA29_RS18375 b08091ac8825a066de57c0921f3a27b7 200 SMART SM00014 59 166 9.8E-11 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NA29_RS03870 82453b282d903e684fa8e72c159f9fd7 262 SUPERFAMILY SSF55781 76 260 2.16E-48 T 09-03-2017 IPR029016 GAF domain-like NA29_RS03870 82453b282d903e684fa8e72c159f9fd7 262 Gene3D G3DSA:3.30.450.40 95 261 3.4E-54 T 09-03-2017 IPR029016 GAF domain-like NA29_RS03870 82453b282d903e684fa8e72c159f9fd7 262 Pfam PF09339 IclR helix-turn-helix domain 22 68 2.8E-10 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS03870 82453b282d903e684fa8e72c159f9fd7 262 Gene3D G3DSA:1.10.10.10 21 89 1.9E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03870 82453b282d903e684fa8e72c159f9fd7 262 Pfam PF01614 Bacterial transcriptional regulator 137 260 1.4E-32 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS03870 82453b282d903e684fa8e72c159f9fd7 262 SUPERFAMILY SSF46785 21 88 9.23E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03870 82453b282d903e684fa8e72c159f9fd7 262 SMART SM00346 18 108 0.0036 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 SUPERFAMILY SSF54211 228 402 7.4E-36 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 ProSitePatterns PS00177 DNA topoisomerase II signature. 432 440 - T 09-03-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 39 181 2.2E-18 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 SUPERFAMILY SSF56719 404 650 1.8E-75 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR01098 Topoisomerase IV subunit B signature 202 223 1.1E-37 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR01098 Topoisomerase IV subunit B signature 31 44 1.1E-37 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR01098 Topoisomerase IV subunit B signature 327 342 1.1E-37 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR01098 Topoisomerase IV subunit B signature 354 377 1.1E-37 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR01098 Topoisomerase IV subunit B signature 464 485 1.1E-37 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR01098 Topoisomerase IV subunit B signature 310 326 1.1E-37 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR01098 Topoisomerase IV subunit B signature 378 403 1.1E-37 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR01098 Topoisomerase IV subunit B signature 184 201 1.1E-37 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 Gene3D G3DSA:3.30.565.10 20 224 3.6E-67 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 Pfam PF00204 DNA gyrase B 260 400 4.4E-33 T 09-03-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 SUPERFAMILY SSF55874 10 225 4.32E-58 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 Pfam PF01751 Toprim domain 429 543 1.9E-12 T 09-03-2017 IPR006171 Toprim domain NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 Gene3D G3DSA:3.40.50.670 414 638 8.4E-78 T 09-03-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 585 649 6.2E-23 T 09-03-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 7 657 44.195 T 09-03-2017 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 SMART SM00433 38 653 3.3E-187 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 SMART SM00387 33 183 2.0E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR00418 DNA topoisomerase II family signature 499 515 1.1E-61 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR00418 DNA topoisomerase II family signature 537 549 1.1E-61 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR00418 DNA topoisomerase II family signature 36 51 1.1E-61 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR00418 DNA topoisomerase II family signature 517 534 1.1E-61 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR00418 DNA topoisomerase II family signature 589 605 1.1E-61 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR00418 DNA topoisomerase II family signature 430 444 1.1E-61 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR00418 DNA topoisomerase II family signature 117 131 1.1E-61 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR00418 DNA topoisomerase II family signature 71 84 1.1E-61 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 PRINTS PR00418 DNA topoisomerase II family signature 282 295 1.1E-61 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 NA29_RS15525 00f475aef293b21a1ac0adb180aaf8f9 659 Gene3D G3DSA:3.30.230.10 228 403 8.1E-38 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NA29_RS25370 4e58a294e3a663c07a60f3ddad438dda 202 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 1 166 6.3E-26 T 09-03-2017 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 NA29_RS25370 4e58a294e3a663c07a60f3ddad438dda 202 SUPERFAMILY SSF55144 1 167 1.46E-34 T 09-03-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase NA29_RS25370 4e58a294e3a663c07a60f3ddad438dda 202 Gene3D G3DSA:3.90.1140.10 1 168 3.8E-36 T 09-03-2017 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase NA29_RS25370 4e58a294e3a663c07a60f3ddad438dda 202 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 169 16.81 T 09-03-2017 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 NA29_RS25370 4e58a294e3a663c07a60f3ddad438dda 202 Pfam PF02834 LigT like Phosphoesterase 11 81 2.2E-11 T 09-03-2017 IPR014051 Phosphoesterase, HXTX NA29_RS13300 e5cd93a465f87423786d2fbd6851adb2 400 Gene3D G3DSA:3.90.1150.10 286 400 3.0E-28 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS13300 e5cd93a465f87423786d2fbd6851adb2 400 SUPERFAMILY SSF53383 2 398 3.26E-90 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS13300 e5cd93a465f87423786d2fbd6851adb2 400 Gene3D G3DSA:3.40.640.10 42 285 1.6E-62 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS13300 e5cd93a465f87423786d2fbd6851adb2 400 Pfam PF00155 Aminotransferase class I and II 31 390 2.1E-45 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS13300 e5cd93a465f87423786d2fbd6851adb2 400 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 397 3.5E-186 T 09-03-2017 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 NA29_RS08890 af9d8b9f8e12f915941d2a42dbec7bdd 242 SUPERFAMILY SSF54211 5 185 1.87E-44 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS08890 af9d8b9f8e12f915941d2a42dbec7bdd 242 ProSitePatterns PS01277 Ribonuclease PH signature. 120 132 - T 09-03-2017 IPR018336 Ribonuclease PH, conserved site NA29_RS08890 af9d8b9f8e12f915941d2a42dbec7bdd 242 Hamap MF_00564 Ribonuclease PH [rph]. 5 241 48.275 T 09-03-2017 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 NA29_RS08890 af9d8b9f8e12f915941d2a42dbec7bdd 242 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 3.5E-24 T 09-03-2017 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 NA29_RS08890 af9d8b9f8e12f915941d2a42dbec7bdd 242 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 6 240 1.6E-116 T 09-03-2017 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 NA29_RS08890 af9d8b9f8e12f915941d2a42dbec7bdd 242 SUPERFAMILY SSF55666 157 240 2.09E-24 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 NA29_RS08890 af9d8b9f8e12f915941d2a42dbec7bdd 242 Gene3D G3DSA:3.30.230.70 5 239 1.8E-33 T 09-03-2017 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 NA29_RS08890 af9d8b9f8e12f915941d2a42dbec7bdd 242 Pfam PF03725 3' exoribonuclease family, domain 2 163 224 3.7E-7 T 09-03-2017 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 NA29_RS00540 e4a82063564c0ef61207e4de8889fad1 441 Pfam PF07690 Major Facilitator Superfamily 37 385 4.5E-28 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS00540 e4a82063564c0ef61207e4de8889fad1 441 ProSitePatterns PS00216 Sugar transport proteins signature 1. 91 107 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS00540 e4a82063564c0ef61207e4de8889fad1 441 Gene3D G3DSA:1.20.1250.20 249 437 4.6E-24 T 09-03-2017 NA29_RS00540 e4a82063564c0ef61207e4de8889fad1 441 Gene3D G3DSA:1.20.1250.20 30 235 5.6E-24 T 09-03-2017 NA29_RS00540 e4a82063564c0ef61207e4de8889fad1 441 SUPERFAMILY SSF103473 23 439 2.75E-65 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS00305 a607c76b529c2174ff236778626e7d38 365 Gene3D G3DSA:1.20.1090.10 188 353 1.6E-43 T 09-03-2017 NA29_RS00305 a607c76b529c2174ff236778626e7d38 365 SUPERFAMILY SSF56796 6 355 2.75E-81 T 09-03-2017 NA29_RS00305 a607c76b529c2174ff236778626e7d38 365 Gene3D G3DSA:3.40.50.1970 5 187 1.2E-40 T 09-03-2017 NA29_RS00305 a607c76b529c2174ff236778626e7d38 365 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 353 7.0E-82 T 09-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 NA29_RS00305 a607c76b529c2174ff236778626e7d38 365 TIGRFAM TIGR03405 Phn_Fe-ADH: phosphonate metabolism-associated iron-containing alcohol dehydrogenase 7 363 7.2E-155 T 09-03-2017 IPR017775 Alcohol dehydrogenase, iron-type, phosphonate metabolism-associated NA29_RS00305 a607c76b529c2174ff236778626e7d38 365 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 176 204 - T 09-03-2017 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 NA29_RS19930 197171242f35cba65b177a11b3d0ea27 330 SMART SM00904 182 307 1.8E-56 T 09-03-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 NA29_RS19930 197171242f35cba65b177a11b3d0ea27 330 Gene3D G3DSA:3.40.50.620 10 186 5.2E-67 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS19930 197171242f35cba65b177a11b3d0ea27 330 Pfam PF06574 FAD synthetase 11 165 6.2E-56 T 09-03-2017 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS19930 197171242f35cba65b177a11b3d0ea27 330 Pfam PF01687 Riboflavin kinase 183 306 2.2E-34 T 09-03-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 NA29_RS19930 197171242f35cba65b177a11b3d0ea27 330 SUPERFAMILY SSF82114 173 307 6.98E-41 T 09-03-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 NA29_RS19930 197171242f35cba65b177a11b3d0ea27 330 PIRSF PIRSF004491 2 313 1.9E-101 T 09-03-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS19930 197171242f35cba65b177a11b3d0ea27 330 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 17 306 1.4E-90 T 09-03-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS19930 197171242f35cba65b177a11b3d0ea27 330 SUPERFAMILY SSF52374 15 174 4.22E-40 T 09-03-2017 NA29_RS19930 197171242f35cba65b177a11b3d0ea27 330 Gene3D G3DSA:2.40.30.30 187 308 1.7E-37 T 09-03-2017 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 NA29_RS09280 b05c633f589c5f0fa32d01620f4c5051 97 SUPERFAMILY SSF141488 18 90 8.37E-16 T 09-03-2017 IPR018660 C-type lysozyme, inhibitor NA29_RS09280 b05c633f589c5f0fa32d01620f4c5051 97 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 24 89 5.2E-13 T 09-03-2017 IPR018660 C-type lysozyme, inhibitor NA29_RS05775 6c7685d6ce244789dea6e990bbfd3897 225 Pfam PF04199 Putative cyclase 23 168 1.9E-17 T 09-03-2017 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734 NA29_RS05775 6c7685d6ce244789dea6e990bbfd3897 225 Gene3D G3DSA:3.50.30.50 18 222 1.6E-52 T 09-03-2017 NA29_RS05775 6c7685d6ce244789dea6e990bbfd3897 225 SUPERFAMILY SSF102198 19 223 2.22E-56 T 09-03-2017 NA29_RS05775 6c7685d6ce244789dea6e990bbfd3897 225 Hamap MF_01969 Kynurenine formamidase [kynB]. 20 225 43.477 T 09-03-2017 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734 NA29_RS05775 6c7685d6ce244789dea6e990bbfd3897 225 TIGRFAM TIGR03035 trp_arylform: arylformamidase 20 225 1.4E-96 T 09-03-2017 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734 NA29_RS06710 2e371af86da7c535fe2f29b77f7a5a36 337 PIRSF PIRSF500210 1 336 1.2E-127 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 NA29_RS06710 2e371af86da7c535fe2f29b77f7a5a36 337 PIRSF PIRSF000904 1 337 4.4E-125 T 09-03-2017 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 NA29_RS06710 2e371af86da7c535fe2f29b77f7a5a36 337 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 333 47.403 T 09-03-2017 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 NA29_RS06710 2e371af86da7c535fe2f29b77f7a5a36 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 29 56 2.5E-72 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 NA29_RS06710 2e371af86da7c535fe2f29b77f7a5a36 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 2.5E-72 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 NA29_RS06710 2e371af86da7c535fe2f29b77f7a5a36 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 66 92 2.5E-72 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 NA29_RS06710 2e371af86da7c535fe2f29b77f7a5a36 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 2.5E-72 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 NA29_RS06710 2e371af86da7c535fe2f29b77f7a5a36 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 2.5E-72 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 NA29_RS06710 2e371af86da7c535fe2f29b77f7a5a36 337 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 2.5E-72 T 09-03-2017 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 NA29_RS06710 2e371af86da7c535fe2f29b77f7a5a36 337 SUPERFAMILY SSF56655 3 331 9.3E-118 T 09-03-2017 NA29_RS06710 2e371af86da7c535fe2f29b77f7a5a36 337 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 194 1.8E-65 T 09-03-2017 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 NA29_RS06710 2e371af86da7c535fe2f29b77f7a5a36 337 Gene3D G3DSA:3.40.190.80 196 333 2.6E-57 T 09-03-2017 NA29_RS06710 2e371af86da7c535fe2f29b77f7a5a36 337 Gene3D G3DSA:3.30.540.10 4 194 5.3E-78 T 09-03-2017 NA29_RS01620 c579212afa7c858fc8090a607c9c12fb 386 Gene3D G3DSA:3.40.640.10 21 255 2.5E-82 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS01620 c579212afa7c858fc8090a607c9c12fb 386 Gene3D G3DSA:3.90.1150.10 256 375 2.1E-32 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS01620 c579212afa7c858fc8090a607c9c12fb 386 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 199 218 - T 09-03-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site NA29_RS01620 c579212afa7c858fc8090a607c9c12fb 386 SUPERFAMILY SSF53383 6 378 1.81E-94 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS01620 c579212afa7c858fc8090a607c9c12fb 386 Pfam PF00266 Aminotransferase class-V 9 368 5.5E-73 T 09-03-2017 IPR000192 Aminotransferase class V domain NA29_RS01620 c579212afa7c858fc8090a607c9c12fb 386 PIRSF PIRSF005572 5 384 2.6E-110 T 09-03-2017 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 NA29_RS09665 cb47a37cf94765e76ac33d586600179c 158 Gene3D G3DSA:1.10.530.10 9 157 3.6E-55 T 09-03-2017 NA29_RS09665 cb47a37cf94765e76ac33d586600179c 158 Pfam PF00959 Phage lysozyme 37 142 3.5E-12 T 09-03-2017 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 NA29_RS09665 cb47a37cf94765e76ac33d586600179c 158 SUPERFAMILY SSF53955 10 156 2.87E-44 T 09-03-2017 IPR023346 Lysozyme-like domain NA29_RS23345 ff6579f458a8c4689b7f8c93ad3d8748 86 Pfam PF04606 Ogr/Delta-like zinc finger 5 50 2.1E-15 T 09-03-2017 IPR007684 Zinc finger, Ogr/Delta-type NA29_RS13295 f1d44d830c8844cb6692b2afad4219fa 302 SUPERFAMILY SSF103481 35 130 8.5E-11 T 09-03-2017 NA29_RS13295 f1d44d830c8844cb6692b2afad4219fa 302 Pfam PF00892 EamA-like transporter family 2 127 7.0E-8 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS13295 f1d44d830c8844cb6692b2afad4219fa 302 Pfam PF00892 EamA-like transporter family 141 282 2.4E-6 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS13295 f1d44d830c8844cb6692b2afad4219fa 302 SUPERFAMILY SSF103481 206 283 8.76E-6 T 09-03-2017 NA29_RS13205 9ddaa21782a959517ba0bd3d0969c53a 175 Gene3D G3DSA:3.30.910.20 14 62 1.8E-32 T 09-03-2017 NA29_RS13205 9ddaa21782a959517ba0bd3d0969c53a 175 Gene3D G3DSA:3.30.910.20 100 165 1.8E-32 T 09-03-2017 NA29_RS13205 9ddaa21782a959517ba0bd3d0969c53a 175 SMART SM00935 13 165 4.1E-57 T 09-03-2017 IPR005632 Chaperone protein Skp GO:0051082 NA29_RS13205 9ddaa21782a959517ba0bd3d0969c53a 175 Pfam PF03938 Outer membrane protein (OmpH-like) 11 164 1.3E-35 T 09-03-2017 IPR005632 Chaperone protein Skp GO:0051082 NA29_RS13205 9ddaa21782a959517ba0bd3d0969c53a 175 SUPERFAMILY SSF111384 24 165 3.79E-35 T 09-03-2017 IPR024930 Skp domain NA29_RS13205 9ddaa21782a959517ba0bd3d0969c53a 175 PIRSF PIRSF002094 2 168 6.3E-50 T 09-03-2017 IPR005632 Chaperone protein Skp GO:0051082 NA29_RS00470 aa6e3cf20436e6097c98a1128b9fe793 447 Gene3D G3DSA:3.90.1150.10 312 438 1.3E-39 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS00470 aa6e3cf20436e6097c98a1128b9fe793 447 Pfam PF00202 Aminotransferase class-III 10 433 9.2E-100 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS00470 aa6e3cf20436e6097c98a1128b9fe793 447 PIRSF PIRSF000521 17 399 9.0E-30 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS00470 aa6e3cf20436e6097c98a1128b9fe793 447 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS00470 aa6e3cf20436e6097c98a1128b9fe793 447 Gene3D G3DSA:3.40.640.10 48 311 1.1E-82 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS00470 aa6e3cf20436e6097c98a1128b9fe793 447 SUPERFAMILY SSF53383 7 434 2.52E-124 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS13585 585a8b9c4aa3ee000a3cca10ba896171 303 Gene3D G3DSA:3.40.190.10 92 176 1.3E-23 T 09-03-2017 NA29_RS13585 585a8b9c4aa3ee000a3cca10ba896171 303 SUPERFAMILY SSF46785 3 109 1.27E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13585 585a8b9c4aa3ee000a3cca10ba896171 303 Gene3D G3DSA:3.40.190.10 177 261 1.8E-22 T 09-03-2017 NA29_RS13585 585a8b9c4aa3ee000a3cca10ba896171 303 Pfam PF03466 LysR substrate binding domain 89 291 3.9E-43 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS13585 585a8b9c4aa3ee000a3cca10ba896171 303 Gene3D G3DSA:1.10.10.10 4 85 7.2E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13585 585a8b9c4aa3ee000a3cca10ba896171 303 SUPERFAMILY SSF53850 90 296 6.36E-47 T 09-03-2017 NA29_RS13585 585a8b9c4aa3ee000a3cca10ba896171 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.3E-13 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00355 31dc2b1ca2272a9177f36759e4891e17 303 Pfam PF03466 LysR substrate binding domain 93 301 2.7E-33 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS00355 31dc2b1ca2272a9177f36759e4891e17 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.8E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00355 31dc2b1ca2272a9177f36759e4891e17 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.8E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00355 31dc2b1ca2272a9177f36759e4891e17 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.8E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00355 31dc2b1ca2272a9177f36759e4891e17 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.5E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00355 31dc2b1ca2272a9177f36759e4891e17 303 SUPERFAMILY SSF53850 93 302 5.73E-33 T 09-03-2017 NA29_RS00355 31dc2b1ca2272a9177f36759e4891e17 303 SUPERFAMILY SSF46785 4 110 3.34E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00355 31dc2b1ca2272a9177f36759e4891e17 303 Gene3D G3DSA:3.40.190.10 93 187 1.3E-17 T 09-03-2017 NA29_RS00355 31dc2b1ca2272a9177f36759e4891e17 303 Gene3D G3DSA:1.10.10.10 4 81 6.2E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00355 31dc2b1ca2272a9177f36759e4891e17 303 Gene3D G3DSA:3.40.190.10 188 267 2.8E-10 T 09-03-2017 NA29_RS24875 a8349f72694371b7bd9e9a9aed695dd9 411 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 411 5.6E-86 T 09-03-2017 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 NA29_RS24875 a8349f72694371b7bd9e9a9aed695dd9 411 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 138 6.5E-20 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 NA29_RS24875 a8349f72694371b7bd9e9a9aed695dd9 411 Gene3D G3DSA:1.20.1330.10 58 138 1.2E-17 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 NA29_RS24875 a8349f72694371b7bd9e9a9aed695dd9 411 Gene3D G3DSA:1.20.1330.10 316 354 1.2E-17 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 NA29_RS24875 a8349f72694371b7bd9e9a9aed695dd9 411 Gene3D G3DSA:1.20.1330.10 238 239 1.2E-17 T 09-03-2017 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 NA29_RS24875 a8349f72694371b7bd9e9a9aed695dd9 411 SUPERFAMILY SSF64518 1 411 5.36E-67 T 09-03-2017 NA29_RS14185 03f310c2dcada5ea82f68fc92b78b612 448 Pfam PF06742 Protein of unknown function (DUF1214) 323 430 1.2E-30 T 09-03-2017 IPR010621 Domain of unknown function DUF1214 NA29_RS14185 03f310c2dcada5ea82f68fc92b78b612 448 SUPERFAMILY SSF160935 4 447 2.88E-109 T 09-03-2017 NA29_RS14185 03f310c2dcada5ea82f68fc92b78b612 448 Gene3D G3DSA:2.60.40.1610 50 189 5.2E-19 T 09-03-2017 IPR010679 Domain of unknown function DUF1254 NA29_RS14185 03f310c2dcada5ea82f68fc92b78b612 448 Gene3D G3DSA:2.60.120.600 278 447 2.4E-50 T 09-03-2017 IPR010621 Domain of unknown function DUF1214 NA29_RS14185 03f310c2dcada5ea82f68fc92b78b612 448 Pfam PF06863 Protein of unknown function (DUF1254) 50 179 2.2E-33 T 09-03-2017 IPR010679 Domain of unknown function DUF1254 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 Gene3D G3DSA:3.30.930.10 241 529 8.7E-121 T 09-03-2017 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 SUPERFAMILY SSF52954 529 633 6.49E-32 T 09-03-2017 IPR004154 Anticodon-binding NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 218 2.3E-14 T 09-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 SMART SM00863 169 218 4.1E-23 T 09-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 SUPERFAMILY SSF81271 2 61 2.4E-14 T 09-03-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 Gene3D G3DSA:3.10.20.30 1 64 1.7E-21 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 34.715 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 Gene3D G3DSA:3.30.980.10 66 129 4.1E-43 T 09-03-2017 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 Gene3D G3DSA:3.30.980.10 187 223 4.1E-43 T 09-03-2017 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 8.1E-227 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 SUPERFAMILY SSF55681 242 525 5.17E-101 T 09-03-2017 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 Gene3D G3DSA:3.40.50.800 530 634 2.8E-34 T 09-03-2017 IPR004154 Anticodon-binding NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 Pfam PF03129 Anticodon binding domain 540 628 4.3E-20 T 09-03-2017 IPR004154 Anticodon-binding NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 317 528 3.0E-43 T 09-03-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 1.3E-53 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 1.3E-53 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 1.3E-53 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 1.3E-53 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 1.3E-53 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 Pfam PF02824 TGS domain 3 61 5.7E-7 T 09-03-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 SUPERFAMILY SSF55186 64 240 1.96E-68 T 09-03-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 NA29_RS09345 3ad1f9e1f6218bfc3ad6270d057220df 635 Gene3D G3DSA:3.30.54.20 130 186 3.1E-22 T 09-03-2017 NA29_RS02670 be286dfdad8dad2d66a012572f89a3d1 85 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS02670 be286dfdad8dad2d66a012572f89a3d1 85 SUPERFAMILY SSF54862 4 76 2.79E-19 T 09-03-2017 NA29_RS02670 be286dfdad8dad2d66a012572f89a3d1 85 Gene3D G3DSA:3.30.70.20 4 75 1.9E-18 T 09-03-2017 NA29_RS02670 be286dfdad8dad2d66a012572f89a3d1 85 Pfam PF00037 4Fe-4S binding domain 6 25 3.8E-6 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NA29_RS05445 6d74e1b4157a42c1afe45183b4cf2f91 318 SUPERFAMILY SSF50475 3 159 3.39E-51 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS05445 6d74e1b4157a42c1afe45183b4cf2f91 318 Gene3D G3DSA:2.30.110.10 4 155 5.0E-56 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS05445 6d74e1b4157a42c1afe45183b4cf2f91 318 Pfam PF01613 Flavin reductase like domain 14 158 2.0E-36 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS05445 6d74e1b4157a42c1afe45183b4cf2f91 318 SMART SM00903 13 156 2.3E-59 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS05545 b413ffb4cec0d7a4896716004b55e492 341 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 317 9.0E-63 T 09-03-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 NA29_RS05545 b413ffb4cec0d7a4896716004b55e492 341 Gene3D G3DSA:3.40.50.2000 165 337 2.6E-56 T 09-03-2017 NA29_RS05545 b413ffb4cec0d7a4896716004b55e492 341 SUPERFAMILY SSF53756 3 337 5.18E-94 T 09-03-2017 NA29_RS05545 b413ffb4cec0d7a4896716004b55e492 341 Gene3D G3DSA:3.40.50.2000 3 151 6.6E-50 T 09-03-2017 NA29_RS05545 b413ffb4cec0d7a4896716004b55e492 341 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 337 2.1E-138 T 09-03-2017 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 NA29_RS19500 890b3840e0826ff8a37fc550a7dcfc50 408 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 23 302 3.7E-68 T 09-03-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NA29_RS19500 890b3840e0826ff8a37fc550a7dcfc50 408 Gene3D G3DSA:3.30.70.1350 221 303 7.2E-24 T 09-03-2017 IPR027470 Cation efflux protein, cytoplasmic domain NA29_RS19500 890b3840e0826ff8a37fc550a7dcfc50 408 Pfam PF16916 Dimerisation domain of Zinc Transporter 225 301 7.7E-22 T 09-03-2017 IPR027470 Cation efflux protein, cytoplasmic domain NA29_RS19500 890b3840e0826ff8a37fc550a7dcfc50 408 Gene3D G3DSA:1.20.1510.10 23 219 1.5E-50 T 09-03-2017 IPR027469 Cation efflux protein transmembrane domain NA29_RS19500 890b3840e0826ff8a37fc550a7dcfc50 408 SUPERFAMILY SSF160240 224 302 4.84E-20 T 09-03-2017 NA29_RS19500 890b3840e0826ff8a37fc550a7dcfc50 408 Pfam PF01545 Cation efflux family 27 219 1.8E-48 T 09-03-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NA29_RS19500 890b3840e0826ff8a37fc550a7dcfc50 408 SUPERFAMILY SSF161111 21 221 9.15E-55 T 09-03-2017 NA29_RS01040 7d8d41dbab8e7b0b3f5ef2caba919d69 571 Pfam PF00732 GMC oxidoreductase 3 294 3.5E-86 T 09-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 NA29_RS01040 7d8d41dbab8e7b0b3f5ef2caba919d69 571 Pfam PF05199 GMC oxidoreductase 386 521 2.1E-41 T 09-03-2017 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 NA29_RS01040 7d8d41dbab8e7b0b3f5ef2caba919d69 571 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 253 267 - T 09-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 NA29_RS01040 7d8d41dbab8e7b0b3f5ef2caba919d69 571 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 09-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 NA29_RS01040 7d8d41dbab8e7b0b3f5ef2caba919d69 571 PIRSF PIRSF000137 1 537 4.4E-151 T 09-03-2017 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 NA29_RS01040 7d8d41dbab8e7b0b3f5ef2caba919d69 571 Gene3D G3DSA:3.50.50.60 2 126 8.4E-117 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS01040 7d8d41dbab8e7b0b3f5ef2caba919d69 571 Gene3D G3DSA:3.50.50.60 464 529 8.4E-117 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS01040 7d8d41dbab8e7b0b3f5ef2caba919d69 571 Gene3D G3DSA:3.50.50.60 187 312 8.4E-117 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS01040 7d8d41dbab8e7b0b3f5ef2caba919d69 571 SUPERFAMILY SSF54373 289 471 4.71E-50 T 09-03-2017 NA29_RS01040 7d8d41dbab8e7b0b3f5ef2caba919d69 571 SUPERFAMILY SSF51905 1 287 8.64E-85 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS01040 7d8d41dbab8e7b0b3f5ef2caba919d69 571 SUPERFAMILY SSF51905 470 529 8.64E-85 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS02085 fa4ae965de690b5aa3e852e78b86b770 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.7E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS02085 fa4ae965de690b5aa3e852e78b86b770 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.7E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS02085 fa4ae965de690b5aa3e852e78b86b770 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.7E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS02085 fa4ae965de690b5aa3e852e78b86b770 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.7E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS02085 fa4ae965de690b5aa3e852e78b86b770 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.7E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS02085 fa4ae965de690b5aa3e852e78b86b770 273 Gene3D G3DSA:3.40.50.720 10 253 2.2E-55 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS02085 fa4ae965de690b5aa3e852e78b86b770 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.5E-7 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS02085 fa4ae965de690b5aa3e852e78b86b770 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 3.5E-7 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS02085 fa4ae965de690b5aa3e852e78b86b770 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.5E-7 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS02085 fa4ae965de690b5aa3e852e78b86b770 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS02085 fa4ae965de690b5aa3e852e78b86b770 273 Pfam PF00106 short chain dehydrogenase 9 195 8.4E-41 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS02085 fa4ae965de690b5aa3e852e78b86b770 273 SUPERFAMILY SSF51735 7 255 1.01E-58 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS15095 a56d039fca52ffdf71b57504d8518710 337 Gene3D G3DSA:3.40.50.720 161 274 4.9E-29 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS15095 a56d039fca52ffdf71b57504d8518710 337 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 337 2.3E-143 T 09-03-2017 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 NA29_RS15095 a56d039fca52ffdf71b57504d8518710 337 SUPERFAMILY SSF51735 118 299 2.73E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS15095 a56d039fca52ffdf71b57504d8518710 337 Pfam PF00107 Zinc-binding dehydrogenase 163 278 3.6E-30 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NA29_RS15095 a56d039fca52ffdf71b57504d8518710 337 Gene3D G3DSA:3.90.180.10 1 160 4.0E-41 T 09-03-2017 IPR011032 GroES-like NA29_RS15095 a56d039fca52ffdf71b57504d8518710 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 106 7.8E-6 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NA29_RS15095 a56d039fca52ffdf71b57504d8518710 337 SMART SM00829 10 335 1.0E-43 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NA29_RS15095 a56d039fca52ffdf71b57504d8518710 337 SUPERFAMILY SSF50129 1 146 1.49E-38 T 09-03-2017 IPR011032 GroES-like NA29_RS03740 9aa204e01f60c97577d20ea796e680c9 216 SMART SM00882 7 204 2.2E-73 T 09-03-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NA29_RS03740 9aa204e01f60c97577d20ea796e680c9 216 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 45 53 - T 09-03-2017 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 NA29_RS03740 9aa204e01f60c97577d20ea796e680c9 216 Gene3D G3DSA:3.40.810.20 5 210 5.4E-85 T 09-03-2017 NA29_RS03740 9aa204e01f60c97577d20ea796e680c9 216 Pfam PF01144 Coenzyme A transferase 7 201 1.1E-41 T 09-03-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NA29_RS03740 9aa204e01f60c97577d20ea796e680c9 216 SUPERFAMILY SSF100950 5 212 2.44E-67 T 09-03-2017 NA29_RS03740 9aa204e01f60c97577d20ea796e680c9 216 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 5 209 4.2E-95 T 09-03-2017 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 NA29_RS04420 01dfa3ce70f823908837002e8033405a 116 Pfam PF09723 Zinc ribbon domain 1 41 4.6E-16 T 09-03-2017 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain NA29_RS04420 01dfa3ce70f823908837002e8033405a 116 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 6.5E-23 T 09-03-2017 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain NA29_RS04420 01dfa3ce70f823908837002e8033405a 116 SMART SM00834 1 42 1.7E-18 T 09-03-2017 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain NA29_RS11880 5dfd39b99a5a48ca730aa7d4eefde1cb 244 Gene3D G3DSA:3.40.50.720 4 243 1.9E-82 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11880 5dfd39b99a5a48ca730aa7d4eefde1cb 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 4.0E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11880 5dfd39b99a5a48ca730aa7d4eefde1cb 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.0E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11880 5dfd39b99a5a48ca730aa7d4eefde1cb 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.0E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11880 5dfd39b99a5a48ca730aa7d4eefde1cb 244 SUPERFAMILY SSF51735 5 243 2.7E-82 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11880 5dfd39b99a5a48ca730aa7d4eefde1cb 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.2E-41 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11880 5dfd39b99a5a48ca730aa7d4eefde1cb 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.2E-41 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11880 5dfd39b99a5a48ca730aa7d4eefde1cb 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.2E-41 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11880 5dfd39b99a5a48ca730aa7d4eefde1cb 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.2E-41 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11880 5dfd39b99a5a48ca730aa7d4eefde1cb 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.2E-41 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11880 5dfd39b99a5a48ca730aa7d4eefde1cb 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.2E-41 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11880 5dfd39b99a5a48ca730aa7d4eefde1cb 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 243 6.6E-66 T 09-03-2017 NA29_RS11880 5dfd39b99a5a48ca730aa7d4eefde1cb 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 188 7.5E-5 T 09-03-2017 NA29_RS11880 5dfd39b99a5a48ca730aa7d4eefde1cb 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS04475 c2751b73117261d11153d62efde64369 637 Gene3D G3DSA:1.20.1560.10 32 359 2.8E-65 T 09-03-2017 NA29_RS04475 c2751b73117261d11153d62efde64369 637 Pfam PF00005 ABC transporter 393 547 1.8E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS04475 c2751b73117261d11153d62efde64369 637 ProSitePatterns PS00211 ABC transporters family signature. 519 533 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS04475 c2751b73117261d11153d62efde64369 637 Pfam PF00664 ABC transporter transmembrane region 45 329 2.8E-41 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NA29_RS04475 c2751b73117261d11153d62efde64369 637 SUPERFAMILY SSF52540 367 617 1.74E-89 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS04475 c2751b73117261d11153d62efde64369 637 SUPERFAMILY SSF90123 27 363 6.41E-62 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NA29_RS04475 c2751b73117261d11153d62efde64369 637 Gene3D G3DSA:3.40.50.300 376 613 5.9E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS04475 c2751b73117261d11153d62efde64369 637 SMART SM00382 402 599 6.5E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS06100 5070da10451086d4447939d8ef40ecbe 251 Pfam PF00765 Autoinducer synthase 7 87 7.4E-10 T 09-03-2017 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 NA29_RS06100 5070da10451086d4447939d8ef40ecbe 251 SUPERFAMILY SSF55729 3 87 7.27E-27 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS06100 5070da10451086d4447939d8ef40ecbe 251 SUPERFAMILY SSF55729 117 215 7.27E-27 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS06100 5070da10451086d4447939d8ef40ecbe 251 Gene3D G3DSA:3.40.630.30 3 215 4.5E-42 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS08475 a931311d68af2265bc1fdb694d1f2b76 354 Gene3D G3DSA:3.40.190.10 36 152 6.2E-13 T 09-03-2017 NA29_RS08475 a931311d68af2265bc1fdb694d1f2b76 354 SUPERFAMILY SSF53850 34 350 2.44E-62 T 09-03-2017 NA29_RS08475 a931311d68af2265bc1fdb694d1f2b76 354 Pfam PF13416 Bacterial extracellular solute-binding protein 58 318 2.3E-32 T 09-03-2017 NA29_RS08475 a931311d68af2265bc1fdb694d1f2b76 354 Gene3D G3DSA:3.40.190.10 153 297 1.8E-36 T 09-03-2017 NA29_RS14450 e32e2fe7e0686cbd1cf29ff1f22c1787 279 SUPERFAMILY SSF51261 64 276 9.94E-47 T 09-03-2017 IPR011055 Duplicated hybrid motif NA29_RS14450 e32e2fe7e0686cbd1cf29ff1f22c1787 279 Gene3D G3DSA:3.10.350.10 62 107 4.8E-16 T 09-03-2017 IPR018392 LysM domain NA29_RS14450 e32e2fe7e0686cbd1cf29ff1f22c1787 279 SMART SM00257 63 107 2.9E-10 T 09-03-2017 IPR018392 LysM domain NA29_RS14450 e32e2fe7e0686cbd1cf29ff1f22c1787 279 Gene3D G3DSA:2.70.70.10 147 277 7.0E-38 T 09-03-2017 NA29_RS14450 e32e2fe7e0686cbd1cf29ff1f22c1787 279 Pfam PF01551 Peptidase family M23 178 272 3.7E-28 T 09-03-2017 IPR016047 Peptidase M23 NA29_RS14450 e32e2fe7e0686cbd1cf29ff1f22c1787 279 Pfam PF01476 LysM domain 64 106 6.1E-12 T 09-03-2017 IPR018392 LysM domain NA29_RS04305 91510991a2d975282e2903693f7ddff6 423 Pfam PF14031 Putative serine dehydratase domain 310 409 1.3E-16 T 09-03-2017 IPR026956 D-serine dehydratase-like domain NA29_RS04305 91510991a2d975282e2903693f7ddff6 423 Gene3D G3DSA:3.20.20.10 92 255 1.6E-9 T 09-03-2017 IPR029066 PLP-binding barrel NA29_RS04305 91510991a2d975282e2903693f7ddff6 423 SMART SM01119 310 410 6.8E-38 T 09-03-2017 IPR026956 D-serine dehydratase-like domain NA29_RS04305 91510991a2d975282e2903693f7ddff6 423 Pfam PF01168 Alanine racemase, N-terminal domain 51 256 2.0E-10 T 09-03-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS04305 91510991a2d975282e2903693f7ddff6 423 SUPERFAMILY SSF51419 51 285 5.23E-28 T 09-03-2017 IPR029066 PLP-binding barrel NA29_RS24915 44003acae276641abd244cade1277baf 243 Pfam PF13860 FlgD Ig-like domain 129 199 7.4E-23 T 09-03-2017 IPR025965 FlgD Ig-like domain NA29_RS24915 44003acae276641abd244cade1277baf 243 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 88 2.0E-24 T 09-03-2017 IPR005648 Flagellar hook capping protein NA29_RS24915 44003acae276641abd244cade1277baf 243 Pfam PF13861 FlgD Tudor-like domain 97 240 6.5E-19 T 09-03-2017 IPR025963 FlgD Tudor-like domain NA29_RS04090 8b9b92b0a169682f73542afb18507b21 302 Pfam PF00892 EamA-like transporter family 161 286 1.2E-6 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS04090 8b9b92b0a169682f73542afb18507b21 302 SUPERFAMILY SSF103481 194 291 5.36E-7 T 09-03-2017 NA29_RS04090 8b9b92b0a169682f73542afb18507b21 302 SUPERFAMILY SSF103481 44 141 7.45E-7 T 09-03-2017 NA29_RS12080 415fabb256f3a68f3b214bec2a31528c 192 Gene3D G3DSA:1.10.357.10 16 190 4.9E-31 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS12080 415fabb256f3a68f3b214bec2a31528c 192 SUPERFAMILY SSF46689 16 86 1.55E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS12080 415fabb256f3a68f3b214bec2a31528c 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 4.5E-14 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS12080 415fabb256f3a68f3b214bec2a31528c 192 SUPERFAMILY SSF48498 83 189 1.38E-17 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS12080 415fabb256f3a68f3b214bec2a31528c 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 4.3E-6 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS12080 415fabb256f3a68f3b214bec2a31528c 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 4.3E-6 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS20795 4fab63566c98a01ca744646d883ff3c3 198 Pfam PF13023 HD domain 20 170 6.1E-39 T 09-03-2017 IPR006674 HD domain NA29_RS20795 4fab63566c98a01ca744646d883ff3c3 198 Gene3D G3DSA:1.10.3210.10 10 185 1.7E-40 T 09-03-2017 IPR006674 HD domain NA29_RS20795 4fab63566c98a01ca744646d883ff3c3 198 SMART SM00471 36 153 0.0041 T 09-03-2017 IPR003607 HD/PDEase domain NA29_RS20795 4fab63566c98a01ca744646d883ff3c3 198 SUPERFAMILY SSF109604 11 164 1.95E-36 T 09-03-2017 NA29_RS24010 e373a9ad4b41179b531d38c7873f6c58 474 SUPERFAMILY SSF53448 1 283 1.92E-67 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS24010 e373a9ad4b41179b531d38c7873f6c58 474 SUPERFAMILY SSF51182 188 473 1.72E-79 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS24010 e373a9ad4b41179b531d38c7873f6c58 474 Gene3D G3DSA:2.60.120.10 361 473 6.3E-45 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS24010 e373a9ad4b41179b531d38c7873f6c58 474 Pfam PF01050 Mannose-6-phosphate isomerase 318 468 3.4E-70 T 09-03-2017 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 NA29_RS24010 e373a9ad4b41179b531d38c7873f6c58 474 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3 472 1.2E-209 T 09-03-2017 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 NA29_RS24010 e373a9ad4b41179b531d38c7873f6c58 474 Gene3D G3DSA:3.90.550.10 2 274 4.0E-93 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS24010 e373a9ad4b41179b531d38c7873f6c58 474 Pfam PF00483 Nucleotidyl transferase 5 289 1.5E-65 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 NA29_RS10025 68b768de6fb482c024c75418c3276b8f 404 SUPERFAMILY SSF53187 12 192 1.34E-57 T 09-03-2017 NA29_RS10025 68b768de6fb482c024c75418c3276b8f 404 SUPERFAMILY SSF53187 319 398 1.34E-57 T 09-03-2017 NA29_RS10025 68b768de6fb482c024c75418c3276b8f 404 Gene3D G3DSA:3.30.70.360 202 295 3.7E-21 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS10025 68b768de6fb482c024c75418c3276b8f 404 Gene3D G3DSA:3.40.630.10 342 398 7.3E-60 T 09-03-2017 NA29_RS10025 68b768de6fb482c024c75418c3276b8f 404 Gene3D G3DSA:3.40.630.10 16 201 7.3E-60 T 09-03-2017 NA29_RS10025 68b768de6fb482c024c75418c3276b8f 404 Pfam PF07687 Peptidase dimerisation domain 189 299 2.4E-22 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS10025 68b768de6fb482c024c75418c3276b8f 404 SUPERFAMILY SSF55031 193 295 5.98E-19 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS10025 68b768de6fb482c024c75418c3276b8f 404 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 24 396 6.4E-111 T 09-03-2017 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 NA29_RS10025 68b768de6fb482c024c75418c3276b8f 404 Pfam PF01546 Peptidase family M20/M25/M40 86 398 4.4E-39 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NA29_RS20800 ec309a72f0f591eb9379c6eab0ce6af8 292 Gene3D G3DSA:3.40.190.10 90 192 4.3E-18 T 09-03-2017 NA29_RS20800 ec309a72f0f591eb9379c6eab0ce6af8 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.9E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS20800 ec309a72f0f591eb9379c6eab0ce6af8 292 Gene3D G3DSA:3.40.190.10 193 238 2.1E-7 T 09-03-2017 NA29_RS20800 ec309a72f0f591eb9379c6eab0ce6af8 292 Pfam PF03466 LysR substrate binding domain 91 281 7.3E-28 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS20800 ec309a72f0f591eb9379c6eab0ce6af8 292 SUPERFAMILY SSF46785 6 114 3.89E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20800 ec309a72f0f591eb9379c6eab0ce6af8 292 SUPERFAMILY SSF53850 92 287 9.78E-27 T 09-03-2017 NA29_RS20800 ec309a72f0f591eb9379c6eab0ce6af8 292 Gene3D G3DSA:1.10.10.10 6 89 1.3E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20800 ec309a72f0f591eb9379c6eab0ce6af8 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.5E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS20800 ec309a72f0f591eb9379c6eab0ce6af8 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.5E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS20800 ec309a72f0f591eb9379c6eab0ce6af8 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.5E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS24725 0958e6dde523d534b46a217220b0fadd 200 Pfam PF04366 Las17-binding protein actin regulator 113 197 6.7E-13 T 09-03-2017 IPR007461 Ysc84 actin-binding domain NA29_RS20880 efe0818048126e121e436a603f68ee78 253 SUPERFAMILY SSF63892 10 246 6.41E-97 T 09-03-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 NA29_RS20880 efe0818048126e121e436a603f68ee78 253 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 12 244 3.3E-93 T 09-03-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 NA29_RS20880 efe0818048126e121e436a603f68ee78 253 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 249 123.886 T 09-03-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 NA29_RS20880 efe0818048126e121e436a603f68ee78 253 Gene3D G3DSA:3.20.20.70 10 246 3.6E-107 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS20880 efe0818048126e121e436a603f68ee78 253 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 12 244 6.3E-102 T 09-03-2017 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 NA29_RS22960 34cc81fda817701d62bc9a316bfd512d 709 SUPERFAMILY SSF52540 512 702 5.24E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22960 34cc81fda817701d62bc9a316bfd512d 709 Pfam PF02706 Chain length determinant protein 3 141 4.9E-9 T 09-03-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 NA29_RS13400 f9fe4e9bea18b91114e391578fdb57f3 144 PRINTS PR01438 Universal stress protein signature 2 20 3.4E-16 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS13400 f9fe4e9bea18b91114e391578fdb57f3 144 PRINTS PR01438 Universal stress protein signature 104 116 3.4E-16 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS13400 f9fe4e9bea18b91114e391578fdb57f3 144 PRINTS PR01438 Universal stress protein signature 122 144 3.4E-16 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS13400 f9fe4e9bea18b91114e391578fdb57f3 144 SUPERFAMILY SSF52402 2 144 7.62E-31 T 09-03-2017 NA29_RS13400 f9fe4e9bea18b91114e391578fdb57f3 144 Gene3D G3DSA:3.40.50.620 2 144 1.0E-29 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS13400 f9fe4e9bea18b91114e391578fdb57f3 144 Pfam PF00582 Universal stress protein family 2 144 3.6E-28 T 09-03-2017 IPR006016 UspA GO:0006950 NA29_RS16150 3fab01edc2c97c10b54f47019092ba3b 163 Pfam PF02082 Transcriptional regulator 1 81 9.2E-23 T 09-03-2017 IPR000944 Transcription regulator Rrf2-type NA29_RS16150 3fab01edc2c97c10b54f47019092ba3b 163 Gene3D G3DSA:1.10.10.10 1 135 6.7E-47 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16150 3fab01edc2c97c10b54f47019092ba3b 163 SUPERFAMILY SSF46785 2 134 3.96E-38 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16150 3fab01edc2c97c10b54f47019092ba3b 163 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 1.9E-35 T 09-03-2017 IPR000944 Transcription regulator Rrf2-type NA29_RS03375 3f881ee42ea99ef64db8fa734bdaa95e 144 Gene3D G3DSA:2.60.120.10 15 142 2.4E-19 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS03375 3f881ee42ea99ef64db8fa734bdaa95e 144 SUPERFAMILY SSF51182 14 133 2.49E-17 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS03375 3f881ee42ea99ef64db8fa734bdaa95e 144 Pfam PF07883 Cupin domain 38 105 4.4E-9 T 09-03-2017 IPR013096 Cupin 2, conserved barrel NA29_RS01755 fada49e648c11a91bbe35f15bd3dff27 244 Gene3D G3DSA:1.10.472.60 56 177 9.2E-39 T 09-03-2017 IPR023169 UPF0413, central domain NA29_RS01755 fada49e648c11a91bbe35f15bd3dff27 244 Pfam PF01323 DSBA-like thioredoxin domain 18 196 3.3E-9 T 09-03-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 NA29_RS01755 fada49e648c11a91bbe35f15bd3dff27 244 SUPERFAMILY SSF52833 12 220 2.49E-32 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS11610 0f166a394b9d2882e7ab8e7858a04e28 415 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 341 2.2E-55 T 09-03-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 NA29_RS11610 0f166a394b9d2882e7ab8e7858a04e28 415 SUPERFAMILY SSF51395 3 350 2.57E-103 T 09-03-2017 NA29_RS11610 0f166a394b9d2882e7ab8e7858a04e28 415 Gene3D G3DSA:3.20.20.70 2 343 1.3E-111 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS11915 77ebca98f9062d9012a91b4bf34efb51 123 SUPERFAMILY SSF54593 1 122 5.36E-15 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS11915 77ebca98f9062d9012a91b4bf34efb51 123 Gene3D G3DSA:3.10.180.10 9 122 4.9E-14 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS06565 15b741736fe6c81922c29bd9cf3d09db 190 Gene3D G3DSA:1.10.238.10 87 179 1.6E-20 T 09-03-2017 IPR011992 EF-hand domain pair NA29_RS06565 15b741736fe6c81922c29bd9cf3d09db 190 Pfam PF13202 EF hand 151 172 4.4E-5 T 09-03-2017 IPR002048 EF-hand domain GO:0005509 NA29_RS06565 15b741736fe6c81922c29bd9cf3d09db 190 ProSitePatterns PS00018 EF-hand calcium-binding domain. 130 142 - T 09-03-2017 IPR018247 EF-Hand 1, calcium-binding site NA29_RS06565 15b741736fe6c81922c29bd9cf3d09db 190 ProSitePatterns PS00018 EF-hand calcium-binding domain. 157 169 - T 09-03-2017 IPR018247 EF-Hand 1, calcium-binding site NA29_RS06565 15b741736fe6c81922c29bd9cf3d09db 190 SMART SM00054 148 176 0.97 T 09-03-2017 IPR002048 EF-hand domain GO:0005509 NA29_RS06565 15b741736fe6c81922c29bd9cf3d09db 190 SMART SM00054 86 114 0.6 T 09-03-2017 IPR002048 EF-hand domain GO:0005509 NA29_RS06565 15b741736fe6c81922c29bd9cf3d09db 190 SMART SM00054 121 146 21.0 T 09-03-2017 IPR002048 EF-hand domain GO:0005509 NA29_RS06565 15b741736fe6c81922c29bd9cf3d09db 190 ProSitePatterns PS00018 EF-hand calcium-binding domain. 95 107 - T 09-03-2017 IPR018247 EF-Hand 1, calcium-binding site NA29_RS06565 15b741736fe6c81922c29bd9cf3d09db 190 Pfam PF13499 EF-hand domain pair 87 142 1.7E-10 T 09-03-2017 IPR002048 EF-hand domain GO:0005509 NA29_RS06565 15b741736fe6c81922c29bd9cf3d09db 190 SUPERFAMILY SSF47473 71 179 7.72E-20 T 09-03-2017 IPR011992 EF-hand domain pair NA29_RS20560 44068fcc670703c98edbaf86c8382444 306 Gene3D G3DSA:1.10.10.10 6 89 2.1E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20560 44068fcc670703c98edbaf86c8382444 306 Gene3D G3DSA:3.40.190.10 180 264 2.5E-17 T 09-03-2017 NA29_RS20560 44068fcc670703c98edbaf86c8382444 306 SUPERFAMILY SSF46785 5 115 1.06E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20560 44068fcc670703c98edbaf86c8382444 306 Pfam PF03466 LysR substrate binding domain 92 296 2.2E-46 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS20560 44068fcc670703c98edbaf86c8382444 306 Gene3D G3DSA:3.40.190.10 96 179 7.7E-27 T 09-03-2017 NA29_RS20560 44068fcc670703c98edbaf86c8382444 306 SUPERFAMILY SSF53850 92 301 8.87E-46 T 09-03-2017 NA29_RS20560 44068fcc670703c98edbaf86c8382444 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 9.3E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21025 b661ec7a94f3de98f8d5180a938a90a6 427 Pfam PF03454 MoeA C-terminal region (domain IV) 352 423 3.6E-15 T 09-03-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS21025 b661ec7a94f3de98f8d5180a938a90a6 427 Gene3D G3DSA:2.40.340.10 349 421 1.1E-26 T 09-03-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS21025 b661ec7a94f3de98f8d5180a938a90a6 427 SMART SM00852 197 338 7.8E-41 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS21025 b661ec7a94f3de98f8d5180a938a90a6 427 SUPERFAMILY SSF53218 194 341 6.28E-42 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS21025 b661ec7a94f3de98f8d5180a938a90a6 427 Pfam PF03453 MoeA N-terminal region (domain I and II) 20 184 1.8E-36 T 09-03-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS21025 b661ec7a94f3de98f8d5180a938a90a6 427 SUPERFAMILY SSF63882 17 193 1.83E-51 T 09-03-2017 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS21025 b661ec7a94f3de98f8d5180a938a90a6 427 Gene3D G3DSA:2.170.190.11 62 158 4.7E-27 T 09-03-2017 NA29_RS21025 b661ec7a94f3de98f8d5180a938a90a6 427 Pfam PF00994 Probable molybdopterin binding domain 200 333 2.8E-30 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS21025 b661ec7a94f3de98f8d5180a938a90a6 427 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 194 333 2.4E-33 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS21025 b661ec7a94f3de98f8d5180a938a90a6 427 SUPERFAMILY SSF63867 348 426 2.22E-21 T 09-03-2017 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 NA29_RS21025 b661ec7a94f3de98f8d5180a938a90a6 427 Gene3D G3DSA:3.40.980.10 180 348 3.6E-61 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS21025 b661ec7a94f3de98f8d5180a938a90a6 427 Gene3D G3DSA:3.90.105.10 159 179 4.0E-22 T 09-03-2017 NA29_RS21025 b661ec7a94f3de98f8d5180a938a90a6 427 Gene3D G3DSA:3.90.105.10 39 61 4.0E-22 T 09-03-2017 NA29_RS03670 d6e759bd53a4bee936f856ac01e63157 233 Gene3D G3DSA:2.40.160.20 55 233 1.7E-50 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NA29_RS03670 d6e759bd53a4bee936f856ac01e63157 233 Pfam PF03922 OmpW family 55 233 2.1E-44 T 09-03-2017 IPR005618 Outer membrane protein, OmpW GO:0019867 NA29_RS03670 d6e759bd53a4bee936f856ac01e63157 233 SUPERFAMILY SSF56925 75 233 5.49E-25 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NA29_RS04935 8586df69fbfee9c615bc7a854ca60520 312 SUPERFAMILY SSF53681 109 259 3.27E-34 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS04935 8586df69fbfee9c615bc7a854ca60520 312 Gene3D G3DSA:3.40.50.1860 4 174 6.8E-47 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS04935 8586df69fbfee9c615bc7a854ca60520 312 Hamap MF_00258 Glutamate racemase [murI]. 5 262 33.818 T 09-03-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS04935 8586df69fbfee9c615bc7a854ca60520 312 TIGRFAM TIGR00067 glut_race: glutamate racemase 7 252 7.4E-56 T 09-03-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS04935 8586df69fbfee9c615bc7a854ca60520 312 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 181 191 - T 09-03-2017 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS04935 8586df69fbfee9c615bc7a854ca60520 312 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 71 79 - T 09-03-2017 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS04935 8586df69fbfee9c615bc7a854ca60520 312 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 216 1.6E-32 T 09-03-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS04935 8586df69fbfee9c615bc7a854ca60520 312 SUPERFAMILY SSF53681 6 107 7.68E-32 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS19885 4c2f33d4bdf961aee26538f345f5cb2d 77 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.426 T 09-03-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS19885 4c2f33d4bdf961aee26538f345f5cb2d 77 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 2.7E-28 T 09-03-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS19885 4c2f33d4bdf961aee26538f345f5cb2d 77 Pfam PF00830 Ribosomal L28 family 3 61 9.6E-28 T 09-03-2017 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS19885 4c2f33d4bdf961aee26538f345f5cb2d 77 SUPERFAMILY SSF143800 2 74 3.34E-30 T 09-03-2017 NA29_RS19885 4c2f33d4bdf961aee26538f345f5cb2d 77 Gene3D G3DSA:2.30.170.40 2 74 1.9E-36 T 09-03-2017 NA29_RS18465 678200a88daee3bab175f9ca75418a4e 373 PIRSF PIRSF001259 2 373 3.8E-121 T 09-03-2017 NA29_RS18465 678200a88daee3bab175f9ca75418a4e 373 Gene3D G3DSA:3.90.870.10 2 210 5.1E-98 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain NA29_RS18465 678200a88daee3bab175f9ca75418a4e 373 SUPERFAMILY SSF55821 3 202 8.7E-86 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain NA29_RS18465 678200a88daee3bab175f9ca75418a4e 373 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 6 199 1.6E-72 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS18465 678200a88daee3bab175f9ca75418a4e 373 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.1E-82 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS18465 678200a88daee3bab175f9ca75418a4e 373 SUPERFAMILY SSF142695 204 367 2.88E-46 T 09-03-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 NA29_RS18465 678200a88daee3bab175f9ca75418a4e 373 Pfam PF00925 GTP cyclohydrolase II 209 363 1.5E-36 T 09-03-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 NA29_RS18465 678200a88daee3bab175f9ca75418a4e 373 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 37.958 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS02565 56b6e12c84ddc987795aecc855bbf7fc 210 Gene3D G3DSA:3.40.30.10 33 205 5.7E-7 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS02565 56b6e12c84ddc987795aecc855bbf7fc 210 SUPERFAMILY SSF52833 65 205 1.34E-10 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS18795 f1e86ffb8884c5622a43c1c729b386fb 392 Gene3D G3DSA:3.30.9.10 139 300 2.5E-66 T 09-03-2017 NA29_RS18795 f1e86ffb8884c5622a43c1c729b386fb 392 Gene3D G3DSA:3.40.50.720 81 110 1.8E-6 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18795 f1e86ffb8884c5622a43c1c729b386fb 392 Gene3D G3DSA:3.40.50.720 2 38 1.8E-6 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18795 f1e86ffb8884c5622a43c1c729b386fb 392 Pfam PF01494 FAD binding domain 5 343 1.8E-83 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 NA29_RS18795 f1e86ffb8884c5622a43c1c729b386fb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 2.8E-28 T 09-03-2017 NA29_RS18795 f1e86ffb8884c5622a43c1c729b386fb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 2.8E-28 T 09-03-2017 NA29_RS18795 f1e86ffb8884c5622a43c1c729b386fb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 2.8E-28 T 09-03-2017 NA29_RS18795 f1e86ffb8884c5622a43c1c729b386fb 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 2.8E-28 T 09-03-2017 NA29_RS18795 f1e86ffb8884c5622a43c1c729b386fb 392 SUPERFAMILY SSF54373 176 276 1.26E-43 T 09-03-2017 NA29_RS18795 f1e86ffb8884c5622a43c1c729b386fb 392 SUPERFAMILY SSF51905 4 173 1.88E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18795 f1e86ffb8884c5622a43c1c729b386fb 392 SUPERFAMILY SSF51905 275 390 1.88E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18795 f1e86ffb8884c5622a43c1c729b386fb 392 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 6 391 1.5E-163 T 09-03-2017 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 NA29_RS24870 f1ce8945005136a805866b1467791919 263 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 252 7.0E-64 T 09-03-2017 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 NA29_RS24870 f1ce8945005136a805866b1467791919 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 8.2E-30 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NA29_RS24870 f1ce8945005136a805866b1467791919 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 8.2E-30 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NA29_RS24870 f1ce8945005136a805866b1467791919 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 8.2E-30 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NA29_RS24870 f1ce8945005136a805866b1467791919 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 8.2E-30 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NA29_RS24870 f1ce8945005136a805866b1467791919 263 Pfam PF01311 Bacterial export proteins, family 1 14 245 8.7E-67 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NA29_RS13135 204d84f401f2636ff7f5bdc66836fba2 309 SUPERFAMILY SSF103481 43 137 3.4E-7 T 09-03-2017 NA29_RS13135 204d84f401f2636ff7f5bdc66836fba2 309 Pfam PF00892 EamA-like transporter family 3 137 4.6E-11 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS07585 3f49eb558ba0023f7b6c5c1550793344 262 Pfam PF00005 ABC transporter 33 172 1.5E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS07585 3f49eb558ba0023f7b6c5c1550793344 262 SUPERFAMILY SSF52540 13 241 1.23E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07585 3f49eb558ba0023f7b6c5c1550793344 262 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS07585 3f49eb558ba0023f7b6c5c1550793344 262 SMART SM00382 42 223 2.4E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS07585 3f49eb558ba0023f7b6c5c1550793344 262 Gene3D G3DSA:3.40.50.300 13 220 2.5E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19845 5c449d7f5703bcf0b8b5e0eebcd2906f 237 SUPERFAMILY SSF52540 4 235 2.15E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19845 5c449d7f5703bcf0b8b5e0eebcd2906f 237 Gene3D G3DSA:3.40.50.300 2 234 1.8E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19845 5c449d7f5703bcf0b8b5e0eebcd2906f 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS19845 5c449d7f5703bcf0b8b5e0eebcd2906f 237 SMART SM00382 29 216 1.3E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS19845 5c449d7f5703bcf0b8b5e0eebcd2906f 237 PIRSF PIRSF039137 1 237 6.4E-107 T 09-03-2017 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 NA29_RS19845 5c449d7f5703bcf0b8b5e0eebcd2906f 237 Pfam PF00005 ABC transporter 21 165 1.3E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS17475 fe0c156af9be09c08afb3992cad2c265 202 Gene3D G3DSA:3.40.50.360 1 198 1.7E-44 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS17475 fe0c156af9be09c08afb3992cad2c265 202 Pfam PF02525 Flavodoxin-like fold 1 187 2.2E-43 T 09-03-2017 IPR003680 Flavodoxin-like fold NA29_RS17475 fe0c156af9be09c08afb3992cad2c265 202 SUPERFAMILY SSF52218 1 199 2.64E-46 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS16440 11989924846b6a9694ec32a880f3bf2b 318 Gene3D G3DSA:3.40.190.10 174 263 9.8E-25 T 09-03-2017 NA29_RS16440 11989924846b6a9694ec32a880f3bf2b 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 9.5E-23 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16440 11989924846b6a9694ec32a880f3bf2b 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.2E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16440 11989924846b6a9694ec32a880f3bf2b 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.2E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16440 11989924846b6a9694ec32a880f3bf2b 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.2E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS16440 11989924846b6a9694ec32a880f3bf2b 318 Gene3D G3DSA:3.40.190.10 102 173 2.6E-15 T 09-03-2017 NA29_RS16440 11989924846b6a9694ec32a880f3bf2b 318 SUPERFAMILY SSF46785 3 85 9.21E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16440 11989924846b6a9694ec32a880f3bf2b 318 Gene3D G3DSA:1.10.10.10 5 89 1.5E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16440 11989924846b6a9694ec32a880f3bf2b 318 Pfam PF03466 LysR substrate binding domain 93 294 4.7E-52 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS16440 11989924846b6a9694ec32a880f3bf2b 318 SUPERFAMILY SSF53850 94 297 2.28E-46 T 09-03-2017 NA29_RS18750 d05f670942d20ca7cbefd918c0f285ac 277 Gene3D G3DSA:3.40.630.40 5 269 8.4E-85 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 NA29_RS18750 d05f670942d20ca7cbefd918c0f285ac 277 SUPERFAMILY SSF53187 5 269 1.28E-78 T 09-03-2017 NA29_RS18750 d05f670942d20ca7cbefd918c0f285ac 277 Pfam PF05013 N-formylglutamate amidohydrolase 7 238 4.8E-58 T 09-03-2017 IPR007709 N-formylglutamate amidohydrolase NA29_RS17145 574ddd418a2fab144de25f4cbed14d31 278 Pfam PF00775 Dioxygenase 100 273 8.5E-48 T 09-03-2017 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 NA29_RS17145 574ddd418a2fab144de25f4cbed14d31 278 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 129 157 - T 09-03-2017 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 NA29_RS17145 574ddd418a2fab144de25f4cbed14d31 278 Pfam PF04444 Catechol dioxygenase N terminus 22 95 4.8E-32 T 09-03-2017 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 NA29_RS17145 574ddd418a2fab144de25f4cbed14d31 278 SUPERFAMILY SSF49482 1 274 4.71E-95 T 09-03-2017 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 NA29_RS17145 574ddd418a2fab144de25f4cbed14d31 278 Gene3D G3DSA:2.60.130.10 1 275 2.5E-98 T 09-03-2017 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 NA29_RS23570 58bc58c7f917e9a6b9e02c4243a2275b 65 Gene3D G3DSA:3.10.20.30 1 65 4.8E-19 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS23570 58bc58c7f917e9a6b9e02c4243a2275b 65 Pfam PF02597 ThiS family 10 65 4.7E-12 T 09-03-2017 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 NA29_RS23570 58bc58c7f917e9a6b9e02c4243a2275b 65 SUPERFAMILY SSF54285 1 65 1.6E-13 T 09-03-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp NA29_RS23570 58bc58c7f917e9a6b9e02c4243a2275b 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 9.1E-16 T 09-03-2017 IPR010035 ThiS, thiamine-biosynthesis NA29_RS07860 42e606749388a9179d3aa043aafa8c73 426 PRINTS PR00762 Chloride channel signature 70 87 1.3E-25 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS07860 42e606749388a9179d3aa043aafa8c73 426 PRINTS PR00762 Chloride channel signature 322 342 1.3E-25 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS07860 42e606749388a9179d3aa043aafa8c73 426 PRINTS PR00762 Chloride channel signature 369 388 1.3E-25 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS07860 42e606749388a9179d3aa043aafa8c73 426 PRINTS PR00762 Chloride channel signature 102 121 1.3E-25 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS07860 42e606749388a9179d3aa043aafa8c73 426 PRINTS PR00762 Chloride channel signature 154 173 1.3E-25 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS07860 42e606749388a9179d3aa043aafa8c73 426 Gene3D G3DSA:1.10.3080.10 3 419 1.1E-74 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 NA29_RS07860 42e606749388a9179d3aa043aafa8c73 426 SUPERFAMILY SSF81340 4 421 4.71E-89 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 NA29_RS07860 42e606749388a9179d3aa043aafa8c73 426 Pfam PF00654 Voltage gated chloride channel 57 401 9.8E-81 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS23765 9aff9afb3078b5fc8bf4a5ee480aa397 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.917 T 09-03-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 NA29_RS23765 9aff9afb3078b5fc8bf4a5ee480aa397 72 SMART SM00316 2 72 0.0034 T 09-03-2017 IPR022967 RNA-binding domain, S1 NA29_RS23765 9aff9afb3078b5fc8bf4a5ee480aa397 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.3E-36 T 09-03-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 NA29_RS23765 9aff9afb3078b5fc8bf4a5ee480aa397 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.1E-26 T 09-03-2017 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 NA29_RS23765 9aff9afb3078b5fc8bf4a5ee480aa397 72 Gene3D G3DSA:2.40.50.140 1 72 1.3E-37 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS23765 9aff9afb3078b5fc8bf4a5ee480aa397 72 SUPERFAMILY SSF50249 1 70 6.12E-27 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS02715 4a3e7cc6d64232f0203a496843c69836 385 SMART SM00478 50 201 1.6E-52 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 NA29_RS02715 4a3e7cc6d64232f0203a496843c69836 385 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 203 219 - T 09-03-2017 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 NA29_RS02715 4a3e7cc6d64232f0203a496843c69836 385 Gene3D G3DSA:3.90.79.10 240 371 7.6E-22 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS02715 4a3e7cc6d64232f0203a496843c69836 385 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 17 275 1.3E-106 T 09-03-2017 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 NA29_RS02715 4a3e7cc6d64232f0203a496843c69836 385 Pfam PF14815 NUDIX domain 246 369 1.0E-21 T 09-03-2017 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 NA29_RS02715 4a3e7cc6d64232f0203a496843c69836 385 Gene3D G3DSA:1.10.340.30 32 133 9.9E-45 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 NA29_RS02715 4a3e7cc6d64232f0203a496843c69836 385 Pfam PF00633 Helix-hairpin-helix motif 110 139 1.2E-6 T 09-03-2017 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 NA29_RS02715 4a3e7cc6d64232f0203a496843c69836 385 SUPERFAMILY SSF48150 15 236 1.73E-75 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 NA29_RS02715 4a3e7cc6d64232f0203a496843c69836 385 SUPERFAMILY SSF55811 231 371 6.29E-24 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS02715 4a3e7cc6d64232f0203a496843c69836 385 Gene3D G3DSA:1.10.1670.10 134 235 4.2E-38 T 09-03-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 NA29_RS02715 4a3e7cc6d64232f0203a496843c69836 385 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 47 178 3.2E-21 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 NA29_RS02715 4a3e7cc6d64232f0203a496843c69836 385 ProSitePatterns PS01155 Endonuclease III family signature. 113 142 - T 09-03-2017 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 NA29_RS02330 493d5ff3ea4effda3c7c34bacba05e22 267 SUPERFAMILY SSF52540 5 240 1.06E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02330 493d5ff3ea4effda3c7c34bacba05e22 267 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS02330 493d5ff3ea4effda3c7c34bacba05e22 267 Gene3D G3DSA:3.40.50.300 2 218 3.3E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02330 493d5ff3ea4effda3c7c34bacba05e22 267 SMART SM00382 34 217 5.4E-21 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS02330 493d5ff3ea4effda3c7c34bacba05e22 267 Pfam PF00005 ABC transporter 25 166 1.6E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS17310 137f9401e577990f1354e6e15e191aa2 477 Gene3D G3DSA:3.40.309.10 248 432 2.2E-69 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS17310 137f9401e577990f1354e6e15e191aa2 477 Gene3D G3DSA:3.40.605.10 1 247 1.6E-81 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS17310 137f9401e577990f1354e6e15e191aa2 477 SUPERFAMILY SSF53720 6 462 1.7E-156 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS17310 137f9401e577990f1354e6e15e191aa2 477 Pfam PF00171 Aldehyde dehydrogenase family 8 457 3.7E-155 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS17310 137f9401e577990f1354e6e15e191aa2 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 233 240 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS17310 137f9401e577990f1354e6e15e191aa2 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 261 272 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS16950 838ac2381ed9ae8cbd711162f56ef034 389 Gene3D G3DSA:3.20.20.70 14 311 1.5E-35 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS16950 838ac2381ed9ae8cbd711162f56ef034 389 SUPERFAMILY SSF51412 14 323 4.58E-34 T 09-03-2017 NA29_RS16950 838ac2381ed9ae8cbd711162f56ef034 389 Pfam PF03060 Nitronate monooxygenase 15 316 1.0E-33 T 09-03-2017 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 NA29_RS11065 cf941127e62dae367f0e8fe2796e3413 1007 SMART SM00155 129 156 5.4E-4 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 NA29_RS11065 cf941127e62dae367f0e8fe2796e3413 1007 SMART SM00155 353 380 7.9E-4 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 NA29_RS11065 cf941127e62dae367f0e8fe2796e3413 1007 Pfam PF13091 PLD-like domain 265 394 5.7E-10 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 NA29_RS11065 cf941127e62dae367f0e8fe2796e3413 1007 SUPERFAMILY SSF56024 252 417 7.18E-22 T 09-03-2017 NA29_RS11065 cf941127e62dae367f0e8fe2796e3413 1007 Gene3D G3DSA:3.30.870.10 263 399 4.2E-16 T 09-03-2017 NA29_RS11065 cf941127e62dae367f0e8fe2796e3413 1007 Gene3D G3DSA:3.30.870.10 17 222 3.8E-26 T 09-03-2017 NA29_RS11065 cf941127e62dae367f0e8fe2796e3413 1007 Gene3D G3DSA:3.60.10.10 750 908 4.5E-12 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase NA29_RS11065 cf941127e62dae367f0e8fe2796e3413 1007 Pfam PF00614 Phospholipase D Active site motif 132 156 5.3E-9 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 NA29_RS11065 cf941127e62dae367f0e8fe2796e3413 1007 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 753 970 4.2E-14 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase NA29_RS11065 cf941127e62dae367f0e8fe2796e3413 1007 SUPERFAMILY SSF56219 749 974 9.42E-36 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase NA29_RS11065 cf941127e62dae367f0e8fe2796e3413 1007 Pfam PF09335 SNARE associated Golgi protein 556 671 1.2E-22 T 09-03-2017 IPR032816 SNARE associated Golgi protein NA29_RS11065 cf941127e62dae367f0e8fe2796e3413 1007 SUPERFAMILY SSF56024 7 225 4.19E-29 T 09-03-2017 NA29_RS13995 33a24905f848a8b4a427ccb8fe7f0af9 471 Gene3D G3DSA:3.10.20.70 5 107 4.2E-40 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NA29_RS13995 33a24905f848a8b4a427ccb8fe7f0af9 471 Pfam PF00120 Glutamine synthetase, catalytic domain 105 468 1.2E-138 T 09-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NA29_RS13995 33a24905f848a8b4a427ccb8fe7f0af9 471 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 470 1.7E-201 T 09-03-2017 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NA29_RS13995 33a24905f848a8b4a427ccb8fe7f0af9 471 SUPERFAMILY SSF55931 104 470 4.41E-138 T 09-03-2017 NA29_RS13995 33a24905f848a8b4a427ccb8fe7f0af9 471 SMART SM01230 104 381 1.3E-150 T 09-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NA29_RS13995 33a24905f848a8b4a427ccb8fe7f0af9 471 Gene3D G3DSA:3.30.590.10 108 457 4.2E-141 T 09-03-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 NA29_RS13995 33a24905f848a8b4a427ccb8fe7f0af9 471 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 09-03-2017 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 NA29_RS13995 33a24905f848a8b4a427ccb8fe7f0af9 471 SUPERFAMILY SSF54368 5 101 1.44E-35 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NA29_RS13995 33a24905f848a8b4a427ccb8fe7f0af9 471 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 388 400 - T 09-03-2017 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NA29_RS13995 33a24905f848a8b4a427ccb8fe7f0af9 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 09-03-2017 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 NA29_RS13995 33a24905f848a8b4a427ccb8fe7f0af9 471 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 97 1.7E-30 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 NA29_RS10945 df19a05239bd6db27ad4dfae4b7a5be8 297 Gene3D G3DSA:3.40.190.10 178 258 1.5E-27 T 09-03-2017 NA29_RS10945 df19a05239bd6db27ad4dfae4b7a5be8 297 Gene3D G3DSA:1.10.10.10 2 82 4.3E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10945 df19a05239bd6db27ad4dfae4b7a5be8 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 66 1.2E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10945 df19a05239bd6db27ad4dfae4b7a5be8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.0E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10945 df19a05239bd6db27ad4dfae4b7a5be8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.0E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10945 df19a05239bd6db27ad4dfae4b7a5be8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.0E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10945 df19a05239bd6db27ad4dfae4b7a5be8 297 Pfam PF03466 LysR substrate binding domain 95 292 5.6E-34 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS10945 df19a05239bd6db27ad4dfae4b7a5be8 297 SUPERFAMILY SSF53850 96 295 4.65E-35 T 09-03-2017 NA29_RS10945 df19a05239bd6db27ad4dfae4b7a5be8 297 SUPERFAMILY SSF46785 3 81 1.59E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10945 df19a05239bd6db27ad4dfae4b7a5be8 297 Gene3D G3DSA:3.40.190.10 96 177 9.7E-31 T 09-03-2017 NA29_RS10270 a99bb20848fc8ae81bea68cc07b58824 301 Gene3D G3DSA:3.40.190.10 179 258 2.0E-21 T 09-03-2017 NA29_RS10270 a99bb20848fc8ae81bea68cc07b58824 301 Gene3D G3DSA:3.40.190.10 93 178 2.1E-28 T 09-03-2017 NA29_RS10270 a99bb20848fc8ae81bea68cc07b58824 301 Gene3D G3DSA:1.10.10.10 7 87 2.8E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10270 a99bb20848fc8ae81bea68cc07b58824 301 SUPERFAMILY SSF46785 7 112 3.37E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10270 a99bb20848fc8ae81bea68cc07b58824 301 Pfam PF03466 LysR substrate binding domain 90 292 1.6E-48 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS10270 a99bb20848fc8ae81bea68cc07b58824 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 7.7E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10270 a99bb20848fc8ae81bea68cc07b58824 301 SUPERFAMILY SSF53850 91 295 1.12E-49 T 09-03-2017 NA29_RS07830 d6a05bd9d8808a057b7c81bb3efe1c3b 407 Gene3D G3DSA:3.30.1540.10 232 315 8.1E-33 T 09-03-2017 NA29_RS07830 d6a05bd9d8808a057b7c81bb3efe1c3b 407 Pfam PF02515 CoA-transferase family III 4 382 6.4E-130 T 09-03-2017 IPR003673 CoA-transferase family III GO:0003824 NA29_RS07830 d6a05bd9d8808a057b7c81bb3efe1c3b 407 Gene3D G3DSA:3.40.50.10540 2 226 1.2E-121 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS07830 d6a05bd9d8808a057b7c81bb3efe1c3b 407 Gene3D G3DSA:3.40.50.10540 316 407 1.2E-121 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS07830 d6a05bd9d8808a057b7c81bb3efe1c3b 407 SUPERFAMILY SSF89796 1 407 2.49E-144 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS23875 3a21100b469a423b3df644671646420d 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 09-03-2017 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23875 3a21100b469a423b3df644671646420d 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 6.0E-35 T 09-03-2017 IPR027486 Ribosomal protein S10 domain NA29_RS23875 3a21100b469a423b3df644671646420d 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 4.5E-17 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23875 3a21100b469a423b3df644671646420d 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 4.5E-17 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23875 3a21100b469a423b3df644671646420d 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 4.5E-17 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23875 3a21100b469a423b3df644671646420d 103 SMART SM01403 7 101 1.0E-55 T 09-03-2017 IPR027486 Ribosomal protein S10 domain NA29_RS23875 3a21100b469a423b3df644671646420d 103 Gene3D G3DSA:3.30.70.600 3 102 1.1E-42 T 09-03-2017 IPR027486 Ribosomal protein S10 domain NA29_RS23875 3a21100b469a423b3df644671646420d 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.412 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23875 3a21100b469a423b3df644671646420d 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.2E-45 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23875 3a21100b469a423b3df644671646420d 103 SUPERFAMILY SSF54999 5 102 5.75E-37 T 09-03-2017 IPR027486 Ribosomal protein S10 domain NA29_RS20735 67c669dce034d15310d3c3022a2fe3d7 364 Pfam PF08402 TOBE domain 290 358 1.3E-6 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 NA29_RS20735 67c669dce034d15310d3c3022a2fe3d7 364 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS20735 67c669dce034d15310d3c3022a2fe3d7 364 Gene3D G3DSA:3.40.50.300 6 242 1.1E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20735 67c669dce034d15310d3c3022a2fe3d7 364 SMART SM00382 37 220 2.7E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS20735 67c669dce034d15310d3c3022a2fe3d7 364 Gene3D G3DSA:2.40.50.140 293 351 6.2E-6 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS20735 67c669dce034d15310d3c3022a2fe3d7 364 SUPERFAMILY SSF50331 247 361 7.48E-12 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS20735 67c669dce034d15310d3c3022a2fe3d7 364 SUPERFAMILY SSF52540 8 251 8.06E-84 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20735 67c669dce034d15310d3c3022a2fe3d7 364 Pfam PF00005 ABC transporter 28 170 5.3E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS18970 babee11dac12c174529e4b6f335cec7c 133 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 34 106 2.9E-18 T 09-03-2017 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 NA29_RS18970 babee11dac12c174529e4b6f335cec7c 133 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 27 122 4.9E-33 T 09-03-2017 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 NA29_RS12665 e151a5ee0e8ffbfcf4b71e7ecb8adf86 362 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 35 357 1.7E-107 T 09-03-2017 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 NA29_RS12665 e151a5ee0e8ffbfcf4b71e7ecb8adf86 362 Pfam PF08402 TOBE domain 278 360 1.4E-11 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 NA29_RS12665 e151a5ee0e8ffbfcf4b71e7ecb8adf86 362 SUPERFAMILY SSF50331 239 359 2.01E-13 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS12665 e151a5ee0e8ffbfcf4b71e7ecb8adf86 362 Gene3D G3DSA:3.40.50.300 3 235 3.5E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS12665 e151a5ee0e8ffbfcf4b71e7ecb8adf86 362 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS12665 e151a5ee0e8ffbfcf4b71e7ecb8adf86 362 SUPERFAMILY SSF52540 6 241 6.51E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS12665 e151a5ee0e8ffbfcf4b71e7ecb8adf86 362 Pfam PF00005 ABC transporter 24 162 7.5E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS12665 e151a5ee0e8ffbfcf4b71e7ecb8adf86 362 Gene3D G3DSA:2.40.50.140 281 353 4.9E-5 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS12665 e151a5ee0e8ffbfcf4b71e7ecb8adf86 362 SMART SM00382 29 212 1.1E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS20285 c34d589164a66654720d9d9bcdab2708 226 SUPERFAMILY SSF56784 2 214 8.27E-36 T 09-03-2017 IPR023214 HAD-like domain NA29_RS20285 c34d589164a66654720d9d9bcdab2708 226 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 4 209 1.6E-37 T 09-03-2017 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial NA29_RS20285 c34d589164a66654720d9d9bcdab2708 226 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 196 2.2E-41 T 09-03-2017 NA29_RS20285 c34d589164a66654720d9d9bcdab2708 226 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 198 2.9E-21 T 09-03-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 NA29_RS20285 c34d589164a66654720d9d9bcdab2708 226 Gene3D G3DSA:3.40.50.1000 82 224 1.6E-49 T 09-03-2017 IPR023214 HAD-like domain NA29_RS20285 c34d589164a66654720d9d9bcdab2708 226 Gene3D G3DSA:1.20.1440.100 16 81 1.4E-31 T 09-03-2017 NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 Pfam PF05594 Haemagluttinin repeat 543 605 1.4 T 09-03-2017 IPR008619 Filamentous haemagglutinin repeat NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 Pfam PF05594 Haemagluttinin repeat 261 370 9.1E-4 T 09-03-2017 IPR008619 Filamentous haemagglutinin repeat NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 Pfam PF05594 Haemagluttinin repeat 378 460 2.0 T 09-03-2017 IPR008619 Filamentous haemagglutinin repeat NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 580 615 9.1E-5 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 637 677 0.15 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 705 743 5.5E-4 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 745 782 1.5E-5 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 359 395 0.0038 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 616 656 0.029 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 538 571 0.36 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 771 790 0.58 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 448 477 0.73 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 Pfam PF05860 haemagglutination activity domain 88 209 3.9E-31 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 23 2.6E-7 T 09-03-2017 IPR024973 ESPR domain NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 Gene3D G3DSA:2.160.20.10 81 371 5.2E-92 T 09-03-2017 IPR012334 Pectin lyase fold NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 112 206 1.7E-21 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 SMART SM00912 93 213 2.2E-41 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS07170 1e92511148e13c2a6034eb76f65a980b 886 SUPERFAMILY SSF51126 82 357 1.32E-58 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS08020 c4de71172ee4a3263db673581586b00e 144 SUPERFAMILY SSF51182 48 132 6.05E-20 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS08020 c4de71172ee4a3263db673581586b00e 144 Gene3D G3DSA:2.60.120.10 46 132 2.0E-20 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS08020 c4de71172ee4a3263db673581586b00e 144 Pfam PF07883 Cupin domain 60 129 6.8E-15 T 09-03-2017 IPR013096 Cupin 2, conserved barrel NA29_RS04665 676149072d34647f45823d6eb01544f1 376 SMART SM01003 4 136 1.1E-61 T 09-03-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal NA29_RS04665 676149072d34647f45823d6eb01544f1 376 SUPERFAMILY SSF52283 1 167 1.62E-47 T 09-03-2017 NA29_RS04665 676149072d34647f45823d6eb01544f1 376 Gene3D G3DSA:3.40.50.1770 1 167 4.6E-54 T 09-03-2017 NA29_RS04665 676149072d34647f45823d6eb01544f1 376 SMART SM01002 145 318 1.1E-77 T 09-03-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain NA29_RS04665 676149072d34647f45823d6eb01544f1 376 Gene3D G3DSA:3.40.50.720 168 199 1.5E-4 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS04665 676149072d34647f45823d6eb01544f1 376 SUPERFAMILY SSF51735 136 322 3.29E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS04665 676149072d34647f45823d6eb01544f1 376 Gene3D G3DSA:3.40.50.1770 200 373 2.6E-37 T 09-03-2017 NA29_RS04665 676149072d34647f45823d6eb01544f1 376 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 2.4E-40 T 09-03-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal NA29_RS04665 676149072d34647f45823d6eb01544f1 376 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 374 5.1E-68 T 09-03-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain NA29_RS01495 57697c3e1204c1ba7e6e03fee94c91fb 187 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 1 175 3.3E-37 T 09-03-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase NA29_RS01495 57697c3e1204c1ba7e6e03fee94c91fb 187 PIRSF PIRSF006806 1 178 9.9E-24 T 09-03-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase NA29_RS01495 57697c3e1204c1ba7e6e03fee94c91fb 187 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 1 175 1.1E-23 T 09-03-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase NA29_RS01495 57697c3e1204c1ba7e6e03fee94c91fb 187 Gene3D G3DSA:3.40.50.10420 1 179 1.0E-39 T 09-03-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain NA29_RS01495 57697c3e1204c1ba7e6e03fee94c91fb 187 SUPERFAMILY SSF100950 1 181 9.77E-41 T 09-03-2017 NA29_RS20105 e5204d4b30977801833b2c3100032a5f 221 TIGRFAM TIGR01351 adk: adenylate kinase 2 190 1.4E-73 T 09-03-2017 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 NA29_RS20105 e5204d4b30977801833b2c3100032a5f 221 Pfam PF00406 Adenylate kinase 5 185 3.5E-57 T 09-03-2017 NA29_RS20105 e5204d4b30977801833b2c3100032a5f 221 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 09-03-2017 NA29_RS20105 e5204d4b30977801833b2c3100032a5f 221 Hamap MF_00235 Adenylate kinase [adk]. 1 221 53.44 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 NA29_RS20105 e5204d4b30977801833b2c3100032a5f 221 Gene3D G3DSA:3.40.50.300 1 217 1.6E-78 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20105 e5204d4b30977801833b2c3100032a5f 221 Pfam PF05191 Adenylate kinase, active site lid 123 158 4.5E-18 T 09-03-2017 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 NA29_RS20105 e5204d4b30977801833b2c3100032a5f 221 SUPERFAMILY SSF52540 1 219 3.91E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20105 e5204d4b30977801833b2c3100032a5f 221 PRINTS PR00094 Adenylate kinase signature 173 187 8.9E-35 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 NA29_RS20105 e5204d4b30977801833b2c3100032a5f 221 PRINTS PR00094 Adenylate kinase signature 32 46 8.9E-35 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 NA29_RS20105 e5204d4b30977801833b2c3100032a5f 221 PRINTS PR00094 Adenylate kinase signature 156 171 8.9E-35 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 NA29_RS20105 e5204d4b30977801833b2c3100032a5f 221 PRINTS PR00094 Adenylate kinase signature 81 97 8.9E-35 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 NA29_RS20105 e5204d4b30977801833b2c3100032a5f 221 PRINTS PR00094 Adenylate kinase signature 4 17 8.9E-35 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 NA29_RS22400 3b4498bb40f7ad295c35603dba9df6d4 293 SUPERFAMILY SSF52540 42 193 4.66E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22400 3b4498bb40f7ad295c35603dba9df6d4 293 SMART SM00382 84 206 1.5E-4 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS22400 3b4498bb40f7ad295c35603dba9df6d4 293 Pfam PF05673 Protein of unknown function (DUF815) 34 285 3.6E-109 T 09-03-2017 IPR008533 Domain of unknown function DUF815 NA29_RS22400 3b4498bb40f7ad295c35603dba9df6d4 293 Gene3D G3DSA:3.40.50.300 61 196 1.4E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08505 04f0f5d5a12602a8f73f150727847b4e 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 330 1.5E-24 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08505 04f0f5d5a12602a8f73f150727847b4e 477 Pfam PF04324 BFD-like [2Fe-2S] binding domain 381 432 5.2E-8 T 09-03-2017 IPR007419 BFD-like [2Fe-2S]-binding domain NA29_RS08505 04f0f5d5a12602a8f73f150727847b4e 477 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 298 316 6.8E-13 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS08505 04f0f5d5a12602a8f73f150727847b4e 477 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 6.8E-13 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS08505 04f0f5d5a12602a8f73f150727847b4e 477 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 6.8E-13 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS08505 04f0f5d5a12602a8f73f150727847b4e 477 SUPERFAMILY SSF51905 1 172 3.82E-36 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08505 04f0f5d5a12602a8f73f150727847b4e 477 SUPERFAMILY SSF51905 215 337 3.82E-36 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08505 04f0f5d5a12602a8f73f150727847b4e 477 PIRSF PIRSF037495 1 468 2.0E-161 T 09-03-2017 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 NA29_RS08505 04f0f5d5a12602a8f73f150727847b4e 477 Gene3D G3DSA:3.50.50.60 117 261 4.5E-5 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08505 04f0f5d5a12602a8f73f150727847b4e 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.1E-16 T 09-03-2017 NA29_RS08505 04f0f5d5a12602a8f73f150727847b4e 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 1.1E-16 T 09-03-2017 NA29_RS08505 04f0f5d5a12602a8f73f150727847b4e 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.1E-16 T 09-03-2017 NA29_RS08505 04f0f5d5a12602a8f73f150727847b4e 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 1.1E-16 T 09-03-2017 NA29_RS08505 04f0f5d5a12602a8f73f150727847b4e 477 Gene3D G3DSA:3.50.50.60 264 335 3.1E-33 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08505 04f0f5d5a12602a8f73f150727847b4e 477 Gene3D G3DSA:3.50.50.60 2 116 3.1E-33 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS19950 2926781d2da1d9b94021d43ba55ebfb3 406 Gene3D G3DSA:1.20.1250.20 218 391 5.9E-19 T 09-03-2017 NA29_RS19950 2926781d2da1d9b94021d43ba55ebfb3 406 Gene3D G3DSA:1.20.1250.20 19 199 1.5E-16 T 09-03-2017 NA29_RS19950 2926781d2da1d9b94021d43ba55ebfb3 406 SUPERFAMILY SSF103473 18 390 2.62E-43 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS19950 2926781d2da1d9b94021d43ba55ebfb3 406 Pfam PF07690 Major Facilitator Superfamily 224 391 4.0E-16 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS03185 a819fa9ce5b5ef0c82377735b7bae934 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS03185 a819fa9ce5b5ef0c82377735b7bae934 484 TIGRFAM TIGR03216 OH_muco_semi_DH: 2-hydroxymuconic semialdehyde dehydrogenase 4 484 2.9E-274 T 09-03-2017 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase GO:0016620|GO:0055114 NA29_RS03185 a819fa9ce5b5ef0c82377735b7bae934 484 SUPERFAMILY SSF53720 3 483 1.44E-158 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS03185 a819fa9ce5b5ef0c82377735b7bae934 484 Gene3D G3DSA:3.40.309.10 266 445 1.0E-64 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS03185 a819fa9ce5b5ef0c82377735b7bae934 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS03185 a819fa9ce5b5ef0c82377735b7bae934 484 Pfam PF00171 Aldehyde dehydrogenase family 12 480 2.5E-158 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS03185 a819fa9ce5b5ef0c82377735b7bae934 484 Gene3D G3DSA:3.40.605.10 2 265 4.0E-91 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS22465 c258abfb1a667187d1b0916da185121a 389 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 3.8E-6 T 09-03-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 NA29_RS22465 c258abfb1a667187d1b0916da185121a 389 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 40 389 3.7E-121 T 09-03-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 NA29_RS22465 c258abfb1a667187d1b0916da185121a 389 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 09-03-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 NA29_RS22465 c258abfb1a667187d1b0916da185121a 389 ProSitePatterns PS01348 MraY family signature 2. 212 223 - T 09-03-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 NA29_RS22465 c258abfb1a667187d1b0916da185121a 389 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 387 23.856 T 09-03-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 NA29_RS22465 c258abfb1a667187d1b0916da185121a 389 Pfam PF00953 Glycosyl transferase family 4 99 307 3.9E-34 T 09-03-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 NA29_RS18160 d48aef8f9036e80b2de2bc2ca4c9a299 314 SUPERFAMILY SSF53850 17 242 1.25E-33 T 09-03-2017 NA29_RS18160 d48aef8f9036e80b2de2bc2ca4c9a299 314 Gene3D G3DSA:3.40.190.10 101 223 1.0E-12 T 09-03-2017 NA29_RS18160 d48aef8f9036e80b2de2bc2ca4c9a299 314 Pfam PF09084 NMT1/THI5 like 29 238 4.3E-31 T 09-03-2017 IPR015168 SsuA/THI5-like NA29_RS16565 16670c26053b6ade5652659ce7d3945b 153 PRINTS PR01438 Universal stress protein signature 127 149 5.6E-20 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS16565 16670c26053b6ade5652659ce7d3945b 153 PRINTS PR01438 Universal stress protein signature 2 20 5.6E-20 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS16565 16670c26053b6ade5652659ce7d3945b 153 PRINTS PR01438 Universal stress protein signature 109 121 5.6E-20 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS16565 16670c26053b6ade5652659ce7d3945b 153 Gene3D G3DSA:3.40.50.620 1 150 3.4E-38 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS16565 16670c26053b6ade5652659ce7d3945b 153 PIRSF PIRSF006276 1 152 6.8E-20 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS16565 16670c26053b6ade5652659ce7d3945b 153 Pfam PF00582 Universal stress protein family 1 149 2.7E-30 T 09-03-2017 IPR006016 UspA GO:0006950 NA29_RS16565 16670c26053b6ade5652659ce7d3945b 153 SUPERFAMILY SSF52402 1 149 6.61E-34 T 09-03-2017 NA29_RS04105 261060e9bb6f3f0df8715ce79cafe942 401 Pfam PF07690 Major Facilitator Superfamily 22 341 4.9E-32 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS04105 261060e9bb6f3f0df8715ce79cafe942 401 Gene3D G3DSA:1.20.1250.20 19 196 1.0E-24 T 09-03-2017 NA29_RS04105 261060e9bb6f3f0df8715ce79cafe942 401 Gene3D G3DSA:1.20.1250.20 212 387 3.1E-10 T 09-03-2017 NA29_RS04105 261060e9bb6f3f0df8715ce79cafe942 401 SUPERFAMILY SSF103473 10 389 1.31E-53 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS16630 b8777c02bffae2828ac87daf02c1f2ab 318 SUPERFAMILY SSF56235 7 314 2.83E-97 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS16630 b8777c02bffae2828ac87daf02c1f2ab 318 Pfam PF01112 Asparaginase 8 314 5.4E-119 T 09-03-2017 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 NA29_RS11555 667e35565816956c33d61747df4654a7 736 SUPERFAMILY SSF56935 50 735 6.33E-80 T 09-03-2017 NA29_RS11555 667e35565816956c33d61747df4654a7 736 Pfam PF00593 TonB dependent receptor 468 732 4.8E-20 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS11555 667e35565816956c33d61747df4654a7 736 Gene3D G3DSA:2.40.170.20 169 733 1.9E-62 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS13620 4f63090a4adb493f3f0e1512adadb5e7 301 Gene3D G3DSA:1.10.3720.10 32 289 1.9E-53 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS13620 4f63090a4adb493f3f0e1512adadb5e7 301 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 29 286 3.5E-119 T 09-03-2017 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 NA29_RS13620 4f63090a4adb493f3f0e1512adadb5e7 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 279 8.0E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS13620 4f63090a4adb493f3f0e1512adadb5e7 301 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 30 280 1.3E-96 T 09-03-2017 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 NA29_RS13620 4f63090a4adb493f3f0e1512adadb5e7 301 SUPERFAMILY SSF161098 30 279 8.11E-56 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS00145 01e48eff6091d65b5ce6ac43e17edbc7 278 Pfam PF03824 High-affinity nickel-transport protein 13 272 2.3E-42 T 09-03-2017 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 NA29_RS05740 71ae43860d5cea39ff567906b8e29fe9 127 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 14 125 4.8E-20 T 09-03-2017 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III NA29_RS19440 5aff52b548756b426ae7848166ddf010 311 Gene3D G3DSA:3.40.1500.10 9 311 8.1E-128 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS19440 5aff52b548756b426ae7848166ddf010 311 Pfam PF01218 Coproporphyrinogen III oxidase 15 311 1.1E-125 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS19440 5aff52b548756b426ae7848166ddf010 311 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 9 286 53.331 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS19440 5aff52b548756b426ae7848166ddf010 311 PIRSF PIRSF000166 2 311 3.1E-120 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS19440 5aff52b548756b426ae7848166ddf010 311 PRINTS PR00073 Coprogen oxidase signature 271 297 8.9E-68 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS19440 5aff52b548756b426ae7848166ddf010 311 PRINTS PR00073 Coprogen oxidase signature 36 52 8.9E-68 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS19440 5aff52b548756b426ae7848166ddf010 311 PRINTS PR00073 Coprogen oxidase signature 171 200 8.9E-68 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS19440 5aff52b548756b426ae7848166ddf010 311 PRINTS PR00073 Coprogen oxidase signature 99 123 8.9E-68 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS19440 5aff52b548756b426ae7848166ddf010 311 PRINTS PR00073 Coprogen oxidase signature 134 156 8.9E-68 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS19440 5aff52b548756b426ae7848166ddf010 311 PRINTS PR00073 Coprogen oxidase signature 243 270 8.9E-68 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS19440 5aff52b548756b426ae7848166ddf010 311 SUPERFAMILY SSF102886 9 311 4.32E-132 T 09-03-2017 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS19440 5aff52b548756b426ae7848166ddf010 311 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 175 199 - T 09-03-2017 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 NA29_RS10810 fd73caa5f3d56fd194f17b93bdb4ccb1 505 Gene3D G3DSA:1.20.1600.10 66 478 7.6E-78 T 09-03-2017 NA29_RS10810 fd73caa5f3d56fd194f17b93bdb4ccb1 505 Pfam PF02321 Outer membrane efflux protein 79 269 2.2E-14 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS10810 fd73caa5f3d56fd194f17b93bdb4ccb1 505 Pfam PF02321 Outer membrane efflux protein 296 477 1.8E-22 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS10810 fd73caa5f3d56fd194f17b93bdb4ccb1 505 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 477 1.5E-95 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NA29_RS10810 fd73caa5f3d56fd194f17b93bdb4ccb1 505 SUPERFAMILY SSF56954 6 36 1.7E-82 T 09-03-2017 NA29_RS10810 fd73caa5f3d56fd194f17b93bdb4ccb1 505 SUPERFAMILY SSF56954 70 481 1.7E-82 T 09-03-2017 NA29_RS06690 2a05b0f8f12742cd01631f24d5630e3c 526 SUPERFAMILY SSF48403 194 469 5.22E-9 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain NA29_RS06690 2a05b0f8f12742cd01631f24d5630e3c 526 Gene3D G3DSA:1.25.40.20 366 470 1.8E-9 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain NA29_RS06690 2a05b0f8f12742cd01631f24d5630e3c 526 Gene3D G3DSA:1.25.40.20 132 299 9.7E-9 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain NA29_RS04070 6def371a2432ded03325affff71cdaf7 438 Pfam PF00296 Luciferase-like monooxygenase 19 383 5.0E-63 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS04070 6def371a2432ded03325affff71cdaf7 438 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 11 428 3.5E-163 T 09-03-2017 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 NA29_RS04070 6def371a2432ded03325affff71cdaf7 438 PIRSF PIRSF000337 4 436 3.3E-151 T 09-03-2017 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 NA29_RS04070 6def371a2432ded03325affff71cdaf7 438 Gene3D G3DSA:3.20.20.30 2 312 9.4E-132 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS04070 6def371a2432ded03325affff71cdaf7 438 Gene3D G3DSA:3.20.20.30 348 431 9.4E-132 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS04070 6def371a2432ded03325affff71cdaf7 438 SUPERFAMILY SSF51679 7 432 3.4E-127 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS19370 3017b3f43d6ab6762fff390aeb0f8145 314 Gene3D G3DSA:3.40.190.10 177 265 3.9E-24 T 09-03-2017 NA29_RS19370 3017b3f43d6ab6762fff390aeb0f8145 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.0E-22 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19370 3017b3f43d6ab6762fff390aeb0f8145 314 Gene3D G3DSA:3.40.190.10 89 176 1.6E-21 T 09-03-2017 NA29_RS19370 3017b3f43d6ab6762fff390aeb0f8145 314 SUPERFAMILY SSF53850 90 297 1.9E-36 T 09-03-2017 NA29_RS19370 3017b3f43d6ab6762fff390aeb0f8145 314 Gene3D G3DSA:1.10.10.10 3 83 1.1E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19370 3017b3f43d6ab6762fff390aeb0f8145 314 SUPERFAMILY SSF46785 3 84 4.15E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19370 3017b3f43d6ab6762fff390aeb0f8145 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.0E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19370 3017b3f43d6ab6762fff390aeb0f8145 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.0E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19370 3017b3f43d6ab6762fff390aeb0f8145 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.0E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19370 3017b3f43d6ab6762fff390aeb0f8145 314 Pfam PF03466 LysR substrate binding domain 88 292 3.8E-39 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 Pfam PF00140 Sigma-70 factor, region 1.2 86 119 1.6E-9 T 09-03-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 Pfam PF04542 Sigma-70 region 2 124 193 7.7E-20 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 80 364 5.7E-134 T 09-03-2017 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 365 37.823 T 09-03-2017 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 SUPERFAMILY SSF88946 86 194 5.34E-44 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 SUPERFAMILY SSF88659 197 278 3.1E-8 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 Pfam PF04539 Sigma-70 region 3 204 286 1.4E-8 T 09-03-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 PRINTS PR00046 Major sigma-70 factor signature 339 350 2.1E-23 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 PRINTS PR00046 Major sigma-70 factor signature 172 180 2.1E-23 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 PRINTS PR00046 Major sigma-70 factor signature 324 339 2.1E-23 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 PRINTS PR00046 Major sigma-70 factor signature 303 315 2.1E-23 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 PRINTS PR00046 Major sigma-70 factor signature 148 161 2.1E-23 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 120 353 2.0E-34 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 Gene3D G3DSA:1.10.10.10 197 253 2.2E-5 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 324 350 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 148 161 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 SUPERFAMILY SSF88659 262 359 7.52E-24 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 Gene3D G3DSA:1.10.10.10 295 360 2.5E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 Pfam PF04545 Sigma-70, region 4 299 351 3.3E-16 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14445 d206b04e302c19dae4cc908904be700d 365 Gene3D G3DSA:1.10.601.10 65 193 4.0E-51 T 09-03-2017 NA29_RS09050 b582b93d6056c3b6bb04db30b0fc2da5 308 SUPERFAMILY SSF56300 55 172 4.56E-35 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS09050 b582b93d6056c3b6bb04db30b0fc2da5 308 SUPERFAMILY SSF56300 231 294 4.56E-35 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS09050 b582b93d6056c3b6bb04db30b0fc2da5 308 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 57 269 4.0E-12 T 09-03-2017 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 NA29_RS09050 b582b93d6056c3b6bb04db30b0fc2da5 308 Gene3D G3DSA:3.60.21.10 55 173 9.6E-34 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS09050 b582b93d6056c3b6bb04db30b0fc2da5 308 Gene3D G3DSA:3.60.21.10 235 290 9.6E-34 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS18770 0c3d57883cfd3ea3fb7fb51e15ca19f6 145 Pfam PF12802 MarR family 46 106 7.6E-13 T 09-03-2017 NA29_RS18770 0c3d57883cfd3ea3fb7fb51e15ca19f6 145 SMART SM00347 40 143 4.7E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS18770 0c3d57883cfd3ea3fb7fb51e15ca19f6 145 Gene3D G3DSA:1.10.10.10 18 134 4.6E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18770 0c3d57883cfd3ea3fb7fb51e15ca19f6 145 SUPERFAMILY SSF46785 17 136 1.92E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS24475 a0418f2a41eaad0955eff8e7b311b816 103 Pfam PF08770 Sulphur oxidation protein SoxZ 7 100 5.0E-41 T 09-03-2017 IPR014880 Sulphur oxidation protein SoxZ NA29_RS24475 a0418f2a41eaad0955eff8e7b311b816 103 SUPERFAMILY SSF81296 3 102 9.94E-35 T 09-03-2017 IPR014756 Immunoglobulin E-set NA29_RS24475 a0418f2a41eaad0955eff8e7b311b816 103 Gene3D G3DSA:2.60.40.10 4 102 4.8E-40 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS24475 a0418f2a41eaad0955eff8e7b311b816 103 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 6 102 2.5E-43 T 09-03-2017 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ NA29_RS20270 1665ef6b5991e4112a672385674d23ac 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.5E-13 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS20270 1665ef6b5991e4112a672385674d23ac 304 SUPERFAMILY SSF53850 90 294 7.29E-27 T 09-03-2017 NA29_RS20270 1665ef6b5991e4112a672385674d23ac 304 Gene3D G3DSA:3.40.190.10 92 176 1.4E-12 T 09-03-2017 NA29_RS20270 1665ef6b5991e4112a672385674d23ac 304 Gene3D G3DSA:3.40.190.10 177 261 3.9E-15 T 09-03-2017 NA29_RS20270 1665ef6b5991e4112a672385674d23ac 304 Gene3D G3DSA:1.10.10.10 1 82 1.9E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20270 1665ef6b5991e4112a672385674d23ac 304 Pfam PF03466 LysR substrate binding domain 88 288 1.3E-25 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS20270 1665ef6b5991e4112a672385674d23ac 304 SUPERFAMILY SSF46785 1 80 1.4E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS09095 88b157cb12934f7258d0b9ffdeed5d34 211 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 7 209 8.5E-72 T 09-03-2017 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 NA29_RS09095 88b157cb12934f7258d0b9ffdeed5d34 211 Pfam PF02666 Phosphatidylserine decarboxylase 42 208 3.4E-33 T 09-03-2017 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 NA29_RS09095 88b157cb12934f7258d0b9ffdeed5d34 211 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 7 211 37.087 T 09-03-2017 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 NA29_RS02270 7b402424dca966a5e6acfa396d42d5db 438 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 79 308 5.3E-75 T 09-03-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 NA29_RS02270 7b402424dca966a5e6acfa396d42d5db 438 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 108 119 1.1E-17 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NA29_RS02270 7b402424dca966a5e6acfa396d42d5db 438 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 190 203 1.1E-17 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NA29_RS02270 7b402424dca966a5e6acfa396d42d5db 438 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 163 180 1.1E-17 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NA29_RS02270 7b402424dca966a5e6acfa396d42d5db 438 Gene3D G3DSA:2.60.410.10 331 419 4.9E-29 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NA29_RS02270 7b402424dca966a5e6acfa396d42d5db 438 SMART SM00936 330 420 2.0E-31 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NA29_RS02270 7b402424dca966a5e6acfa396d42d5db 438 Gene3D G3DSA:3.40.710.10 73 330 5.9E-90 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS02270 7b402424dca966a5e6acfa396d42d5db 438 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 330 419 4.9E-24 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 NA29_RS02270 7b402424dca966a5e6acfa396d42d5db 438 SUPERFAMILY SSF56601 77 371 8.67E-72 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS00840 30b7cdebb959e92f58495be3a950514f 151 Pfam PF02090 Salmonella surface presentation of antigen gene type M protein 25 145 3.7E-13 T 09-03-2017 IPR002954 Salmonella surface presentation of antigen M protein NA29_RS14260 4052f073702dfd3cc3e2b2a6ea1ab494 469 Pfam PF11870 Domain of unknown function (DUF3390) 392 466 7.7E-9 T 09-03-2017 IPR024569 4Fe-4S binding protein, C-terminal NA29_RS14260 4052f073702dfd3cc3e2b2a6ea1ab494 469 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 68 292 2.5E-48 T 09-03-2017 IPR003741 LUD domain NA29_RS14260 4052f073702dfd3cc3e2b2a6ea1ab494 469 Pfam PF13183 4Fe-4S dicluster domain 307 374 1.6E-9 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NA29_RS14260 4052f073702dfd3cc3e2b2a6ea1ab494 469 SUPERFAMILY SSF54862 307 400 7.53E-16 T 09-03-2017 NA29_RS14260 4052f073702dfd3cc3e2b2a6ea1ab494 469 SUPERFAMILY SSF100950 132 293 2.09E-32 T 09-03-2017 NA29_RS14260 4052f073702dfd3cc3e2b2a6ea1ab494 469 SUPERFAMILY SSF100950 61 86 2.09E-32 T 09-03-2017 NA29_RS14260 4052f073702dfd3cc3e2b2a6ea1ab494 469 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 310 321 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS14260 4052f073702dfd3cc3e2b2a6ea1ab494 469 Gene3D G3DSA:1.10.1060.10 304 395 1.7E-13 T 09-03-2017 NA29_RS14260 4052f073702dfd3cc3e2b2a6ea1ab494 469 Gene3D G3DSA:3.40.50.10420 187 293 7.9E-43 T 09-03-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain NA29_RS14260 4052f073702dfd3cc3e2b2a6ea1ab494 469 Gene3D G3DSA:3.40.50.10420 61 125 7.9E-43 T 09-03-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain NA29_RS08490 98c33f5dadbfe6af0d97efc0940b54d2 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 261 1.2E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS08490 98c33f5dadbfe6af0d97efc0940b54d2 271 Gene3D G3DSA:1.10.3720.10 19 260 1.6E-54 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS08490 98c33f5dadbfe6af0d97efc0940b54d2 271 SUPERFAMILY SSF161098 15 260 5.7E-59 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS04885 24f54c90dcacd5386ae93d16e5c6e727 274 Gene3D G3DSA:3.40.50.620 97 236 1.1E-30 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS04885 24f54c90dcacd5386ae93d16e5c6e727 274 Pfam PF02698 DUF218 domain 103 268 7.1E-25 T 09-03-2017 IPR003848 Domain of unknown function DUF218 NA29_RS24035 0dad3e2b87da219ac300f312685064c7 231 SUPERFAMILY SSF56808 6 225 2.49E-80 T 09-03-2017 IPR023674 Ribosomal protein L1-like NA29_RS24035 0dad3e2b87da219ac300f312685064c7 231 Gene3D G3DSA:3.30.190.20 161 225 8.5E-44 T 09-03-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 NA29_RS24035 0dad3e2b87da219ac300f312685064c7 231 Gene3D G3DSA:3.30.190.20 16 68 8.5E-44 T 09-03-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 NA29_RS24035 0dad3e2b87da219ac300f312685064c7 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 7.1E-105 T 09-03-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 NA29_RS24035 0dad3e2b87da219ac300f312685064c7 231 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 2.1E-51 T 09-03-2017 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein NA29_RS24035 0dad3e2b87da219ac300f312685064c7 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.178 T 09-03-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 NA29_RS24035 0dad3e2b87da219ac300f312685064c7 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 09-03-2017 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS24035 0dad3e2b87da219ac300f312685064c7 231 Gene3D G3DSA:3.40.50.790 69 159 1.2E-41 T 09-03-2017 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich NA29_RS24035 0dad3e2b87da219ac300f312685064c7 231 PIRSF PIRSF002155 1 227 8.0E-78 T 09-03-2017 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS20150 451ec0b8d94f95c82279a1d1e2b76320 350 Pfam PF01734 Patatin-like phospholipase 5 205 2.7E-17 T 09-03-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NA29_RS20150 451ec0b8d94f95c82279a1d1e2b76320 350 Gene3D G3DSA:3.40.1090.10 3 206 1.7E-10 T 09-03-2017 NA29_RS20150 451ec0b8d94f95c82279a1d1e2b76320 350 SUPERFAMILY SSF52151 3 81 7.06E-44 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NA29_RS20150 451ec0b8d94f95c82279a1d1e2b76320 350 SUPERFAMILY SSF52151 113 338 7.06E-44 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NA29_RS05595 1a83b0858216a7616d61e33d26ee0eb3 168 SMART SM01001 9 160 2.5E-100 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 NA29_RS05595 1a83b0858216a7616d61e33d26ee0eb3 168 PIRSF PIRSF001338 6 164 1.8E-65 T 09-03-2017 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 NA29_RS05595 1a83b0858216a7616d61e33d26ee0eb3 168 SUPERFAMILY SSF52255 10 162 1.44E-64 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 NA29_RS05595 1a83b0858216a7616d61e33d26ee0eb3 168 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 11 164 31.819 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 NA29_RS05595 1a83b0858216a7616d61e33d26ee0eb3 168 Gene3D G3DSA:3.40.50.7700 4 160 3.1E-73 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 NA29_RS05595 1a83b0858216a7616d61e33d26ee0eb3 168 Pfam PF00731 AIR carboxylase 10 158 4.1E-64 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 NA29_RS05595 1a83b0858216a7616d61e33d26ee0eb3 168 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 11 159 2.9E-64 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 NA29_RS08895 9a8649a43d19f9ded1b77405d73bb74f 309 Pfam PF03755 YicC-like family, N-terminal region 6 163 1.1E-37 T 09-03-2017 IPR013527 YicC-like, N-terminal NA29_RS08895 9a8649a43d19f9ded1b77405d73bb74f 309 Pfam PF08340 Domain of unknown function (DUF1732) 225 309 7.7E-33 T 09-03-2017 IPR013551 Domain of unknown function DUF1732 NA29_RS08895 9a8649a43d19f9ded1b77405d73bb74f 309 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 6 309 1.9E-68 T 09-03-2017 IPR005229 Conserved hypothetical protein CHP00255 NA29_RS01305 9b13bf9be1932886619806e63844ed83 151 Pfam PF03788 LrgA family 31 122 1.8E-26 T 09-03-2017 IPR005538 LrgA/CidA family GO:0016021 NA29_RS03080 79f53fb019453ac4c45b4f73aea08100 402 Gene3D G3DSA:3.40.50.2000 157 343 2.3E-18 T 09-03-2017 NA29_RS03080 79f53fb019453ac4c45b4f73aea08100 402 Pfam PF13439 Glycosyltransferase Family 4 14 163 2.9E-24 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 NA29_RS03080 79f53fb019453ac4c45b4f73aea08100 402 SUPERFAMILY SSF53756 2 363 5.1E-57 T 09-03-2017 NA29_RS03080 79f53fb019453ac4c45b4f73aea08100 402 Pfam PF00534 Glycosyl transferases group 1 190 343 3.0E-21 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 NA29_RS06795 b6c315b922045004ce73580581b5d1ef 321 Pfam PF03466 LysR substrate binding domain 97 301 4.4E-20 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS06795 b6c315b922045004ce73580581b5d1ef 321 Gene3D G3DSA:3.40.190.10 176 273 2.4E-25 T 09-03-2017 NA29_RS06795 b6c315b922045004ce73580581b5d1ef 321 Gene3D G3DSA:1.10.10.10 4 88 9.7E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06795 b6c315b922045004ce73580581b5d1ef 321 SUPERFAMILY SSF46785 8 86 2.18E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06795 b6c315b922045004ce73580581b5d1ef 321 SUPERFAMILY SSF53850 92 301 1.77E-37 T 09-03-2017 NA29_RS06795 b6c315b922045004ce73580581b5d1ef 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 8.1E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06795 b6c315b922045004ce73580581b5d1ef 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 8.1E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06795 b6c315b922045004ce73580581b5d1ef 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 8.1E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06795 b6c315b922045004ce73580581b5d1ef 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.7E-13 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06795 b6c315b922045004ce73580581b5d1ef 321 Gene3D G3DSA:3.40.190.10 277 306 2.4E-29 T 09-03-2017 NA29_RS06795 b6c315b922045004ce73580581b5d1ef 321 Gene3D G3DSA:3.40.190.10 92 175 2.4E-29 T 09-03-2017 NA29_RS22105 eeab479251eee726128db9b325abb853 670 Pfam PF02779 Transketolase, pyrimidine binding domain 358 532 3.7E-46 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain NA29_RS22105 eeab479251eee726128db9b325abb853 670 SMART SM00861 359 533 2.0E-68 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain NA29_RS22105 eeab479251eee726128db9b325abb853 670 ProSitePatterns PS00801 Transketolase signature 1. 17 37 - T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 NA29_RS22105 eeab479251eee726128db9b325abb853 670 TIGRFAM TIGR00232 tktlase_bact: transketolase 12 669 5.3E-300 T 09-03-2017 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 NA29_RS22105 eeab479251eee726128db9b325abb853 670 Pfam PF02780 Transketolase, C-terminal domain 548 661 8.2E-19 T 09-03-2017 IPR033248 Transketolase, C-terminal domain NA29_RS22105 eeab479251eee726128db9b325abb853 670 SUPERFAMILY SSF52922 541 670 3.14E-46 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NA29_RS22105 eeab479251eee726128db9b325abb853 670 Gene3D G3DSA:3.40.50.970 5 323 1.8E-131 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS22105 eeab479251eee726128db9b325abb853 670 SUPERFAMILY SSF52518 9 334 7.12E-121 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS22105 eeab479251eee726128db9b325abb853 670 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 11 338 1.8E-163 T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 NA29_RS22105 eeab479251eee726128db9b325abb853 670 Gene3D G3DSA:3.40.50.920 546 669 8.9E-51 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NA29_RS22105 eeab479251eee726128db9b325abb853 670 SUPERFAMILY SSF52518 351 534 2.72E-65 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS22105 eeab479251eee726128db9b325abb853 670 Gene3D G3DSA:3.40.50.970 331 541 8.2E-79 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS08395 2d7cc28c059c9de36e92b624713412b6 181 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 28 51 5.7E-9 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site NA29_RS08395 2d7cc28c059c9de36e92b624713412b6 181 Pfam PF13633 Prokaryotic N-terminal methylation site 28 53 1.0E-9 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site NA29_RS08395 2d7cc28c059c9de36e92b624713412b6 181 PRINTS PR00813 Bacterial general secretion pathway protein G signature 66 84 1.9E-6 T 09-03-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 NA29_RS08395 2d7cc28c059c9de36e92b624713412b6 181 PRINTS PR00813 Bacterial general secretion pathway protein G signature 30 55 1.9E-6 T 09-03-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 NA29_RS08395 2d7cc28c059c9de36e92b624713412b6 181 Gene3D G3DSA:3.30.700.10 31 101 1.1E-7 T 09-03-2017 NA29_RS08395 2d7cc28c059c9de36e92b624713412b6 181 SUPERFAMILY SSF54523 31 155 4.19E-18 T 09-03-2017 NA29_RS15125 5916bdeb148acf433a0e9dd03a099cfe 414 Pfam PF08007 Cupin superfamily protein 24 331 5.5E-93 T 09-03-2017 IPR003347 JmjC domain NA29_RS15125 5916bdeb148acf433a0e9dd03a099cfe 414 SMART SM00558 91 231 1.2E-4 T 09-03-2017 IPR003347 JmjC domain NA29_RS15125 5916bdeb148acf433a0e9dd03a099cfe 414 Gene3D G3DSA:2.60.120.650 17 221 8.2E-44 T 09-03-2017 NA29_RS15125 5916bdeb148acf433a0e9dd03a099cfe 414 SUPERFAMILY SSF51197 15 311 5.49E-78 T 09-03-2017 NA29_RS13520 d7cf204a44a94d4e41bb825677285bf2 349 SUPERFAMILY SSF51735 2 338 5.22E-69 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13520 d7cf204a44a94d4e41bb825677285bf2 349 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 252 1.5E-47 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NA29_RS13520 d7cf204a44a94d4e41bb825677285bf2 349 Gene3D G3DSA:3.40.50.720 1 239 1.8E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13520 d7cf204a44a94d4e41bb825677285bf2 349 Gene3D G3DSA:3.90.25.10 256 326 1.1E-38 T 09-03-2017 NA29_RS14465 c599c3362b6e18254b8808e55a23ae72 272 SUPERFAMILY SSF161098 66 249 2.09E-28 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS14465 c599c3362b6e18254b8808e55a23ae72 272 Gene3D G3DSA:1.10.3720.10 61 259 4.9E-19 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS14465 c599c3362b6e18254b8808e55a23ae72 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 259 2.9E-24 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS17895 2a0ca4cc2809b94681886b7a73966f6f 447 PIRSF PIRSF006066 7 447 1.1E-88 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 NA29_RS17895 2a0ca4cc2809b94681886b7a73966f6f 447 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 442 2.3E-95 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 NA29_RS17895 2a0ca4cc2809b94681886b7a73966f6f 447 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 14 436 3.7E-89 T 09-03-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit NA29_RS14760 d94bb3cb9eb0458fef3420655da1d577 432 SUPERFAMILY SSF53623 5 287 1.49E-88 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS14760 d94bb3cb9eb0458fef3420655da1d577 432 Gene3D G3DSA:3.40.1190.10 6 290 5.7E-93 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS14760 d94bb3cb9eb0458fef3420655da1d577 432 Gene3D G3DSA:3.90.190.20 291 426 9.1E-39 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS14760 d94bb3cb9eb0458fef3420655da1d577 432 PIRSF PIRSF001563 2 431 3.6E-109 T 09-03-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 NA29_RS14760 d94bb3cb9eb0458fef3420655da1d577 432 TIGRFAM TIGR01499 folC: bifunctional protein FolC 27 424 1.6E-100 T 09-03-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 NA29_RS14760 d94bb3cb9eb0458fef3420655da1d577 432 Pfam PF08245 Mur ligase middle domain 47 265 7.6E-12 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 NA29_RS14760 d94bb3cb9eb0458fef3420655da1d577 432 SUPERFAMILY SSF53244 289 426 3.66E-29 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 NA29_RS18855 c2e2b44ee9ab4b0fa4c3bc71efd76a57 276 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 09-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 NA29_RS18855 c2e2b44ee9ab4b0fa4c3bc71efd76a57 276 Gene3D G3DSA:3.90.226.10 6 263 8.8E-70 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS18855 c2e2b44ee9ab4b0fa4c3bc71efd76a57 276 SUPERFAMILY SSF52096 8 248 4.09E-69 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS18855 c2e2b44ee9ab4b0fa4c3bc71efd76a57 276 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 263 2.9E-53 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS16575 9b8a22812599bbe044f0aa60ac6d72f2 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 288 2.2E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16575 9b8a22812599bbe044f0aa60ac6d72f2 291 SUPERFAMILY SSF161098 53 278 3.27E-60 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16575 9b8a22812599bbe044f0aa60ac6d72f2 291 Gene3D G3DSA:1.10.3720.10 3 279 6.3E-59 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01595 532c03d1b1f47dab94d12980b741281e 356 Gene3D G3DSA:3.40.50.300 4 247 2.7E-76 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01595 532c03d1b1f47dab94d12980b741281e 356 SMART SM00382 28 217 6.7E-19 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS01595 532c03d1b1f47dab94d12980b741281e 356 Pfam PF00005 ABC transporter 19 167 9.9E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS01595 532c03d1b1f47dab94d12980b741281e 356 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS01595 532c03d1b1f47dab94d12980b741281e 356 SUPERFAMILY SSF50331 243 329 1.25E-8 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS01595 532c03d1b1f47dab94d12980b741281e 356 SUPERFAMILY SSF52540 4 246 7.66E-80 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23845 169009328964a2a3582c387dae62d5cf 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 106 3.0E-42 T 09-03-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23845 169009328964a2a3582c387dae62d5cf 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 24.617 T 09-03-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23845 169009328964a2a3582c387dae62d5cf 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 09-03-2017 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23845 169009328964a2a3582c387dae62d5cf 109 Gene3D G3DSA:3.90.470.10 1 108 1.5E-41 T 09-03-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 NA29_RS23845 169009328964a2a3582c387dae62d5cf 109 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 2.2E-32 T 09-03-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 NA29_RS23845 169009328964a2a3582c387dae62d5cf 109 SUPERFAMILY SSF54843 1 108 3.79E-41 T 09-03-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 NA29_RS14495 58b892ae8dbbf982ec85ebe164d13b29 443 SUPERFAMILY SSF56935 125 422 1.65E-5 T 09-03-2017 NA29_RS20975 505028284790d3776d53c895dc203e23 208 Gene3D G3DSA:3.90.950.10 8 194 8.5E-54 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like NA29_RS20975 505028284790d3776d53c895dc203e23 208 SUPERFAMILY SSF52972 7 190 2.55E-55 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like NA29_RS20975 505028284790d3776d53c895dc203e23 208 TIGRFAM TIGR00172 maf: septum formation protein Maf 8 189 2.6E-45 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 NA29_RS20975 505028284790d3776d53c895dc203e23 208 Pfam PF02545 Maf-like protein 9 190 5.5E-42 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 NA29_RS20975 505028284790d3776d53c895dc203e23 208 Hamap MF_00528 Septum formation protein Maf [maf]. 8 196 28.64 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 NA29_RS20975 505028284790d3776d53c895dc203e23 208 PIRSF PIRSF006305 4 196 2.7E-47 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 NA29_RS15490 1396a8c0e4762f5a8db0ff01ec0fa25b 151 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 7 150 2.2E-32 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS15490 1396a8c0e4762f5a8db0ff01ec0fa25b 151 SUPERFAMILY SSF55298 1 150 8.95E-54 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS15490 1396a8c0e4762f5a8db0ff01ec0fa25b 151 Gene3D G3DSA:3.30.1330.40 2 150 6.1E-64 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS03485 2b3ca48375913d1346e4606459679378 216 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 74 4.7E-7 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS03485 2b3ca48375913d1346e4606459679378 216 SUPERFAMILY SSF47616 82 208 1.95E-27 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS03485 2b3ca48375913d1346e4606459679378 216 Gene3D G3DSA:1.20.1050.10 89 197 6.5E-35 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS03485 2b3ca48375913d1346e4606459679378 216 Gene3D G3DSA:3.40.30.10 1 88 2.7E-25 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS03485 2b3ca48375913d1346e4606459679378 216 Pfam PF00043 Glutathione S-transferase, C-terminal domain 124 198 1.0E-12 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal NA29_RS03485 2b3ca48375913d1346e4606459679378 216 SUPERFAMILY SSF52833 1 78 8.41E-17 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS14690 1252049675f5e486d05053cc22b7773a 71 Gene3D G3DSA:2.40.50.100 6 69 2.9E-21 T 09-03-2017 NA29_RS14690 1252049675f5e486d05053cc22b7773a 71 Pfam PF03459 TOBE domain 8 67 3.7E-15 T 09-03-2017 IPR005116 Transport-associated OB, type 1 NA29_RS14690 1252049675f5e486d05053cc22b7773a 71 SUPERFAMILY SSF50331 6 69 2.43E-16 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS14690 1252049675f5e486d05053cc22b7773a 71 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 6 69 8.9E-18 T 09-03-2017 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 NA29_RS15670 371a99b853f51a8c20899167bf605b0c 455 Pfam PF01523 Putative modulator of DNA gyrase 39 328 2.6E-51 T 09-03-2017 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 NA29_RS15670 371a99b853f51a8c20899167bf605b0c 455 SUPERFAMILY SSF111283 16 454 4.71E-122 T 09-03-2017 NA29_RS19690 26f39de56c07a9be4c86f3c60cfc016b 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 6.7E-12 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS19690 26f39de56c07a9be4c86f3c60cfc016b 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 35 50 6.7E-12 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS19690 26f39de56c07a9be4c86f3c60cfc016b 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 65 6.7E-12 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS19690 26f39de56c07a9be4c86f3c60cfc016b 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 82 97 6.7E-12 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS19690 26f39de56c07a9be4c86f3c60cfc016b 117 SMART SM00418 33 108 5.7E-24 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS19690 26f39de56c07a9be4c86f3c60cfc016b 117 Pfam PF01022 Bacterial regulatory protein, arsR family 41 85 3.8E-12 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS19690 26f39de56c07a9be4c86f3c60cfc016b 117 Gene3D G3DSA:1.10.10.10 21 115 5.3E-35 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19690 26f39de56c07a9be4c86f3c60cfc016b 117 SUPERFAMILY SSF46785 28 114 1.27E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11735 48e53e9b76dcc80df24280376b8006c9 596 SUPERFAMILY SSF69349 440 596 8.63E-6 T 09-03-2017 NA29_RS11735 48e53e9b76dcc80df24280376b8006c9 596 SUPERFAMILY SSF69279 21 181 3.36E-13 T 09-03-2017 NA29_RS11735 48e53e9b76dcc80df24280376b8006c9 596 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 30 492 2.0E-56 T 09-03-2017 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein NA29_RS11735 48e53e9b76dcc80df24280376b8006c9 596 SUPERFAMILY SSF69255 370 450 7.32E-18 T 09-03-2017 NA29_RS11735 48e53e9b76dcc80df24280376b8006c9 596 Gene3D G3DSA:2.40.50.230 380 450 6.1E-14 T 09-03-2017 IPR006531 Gp5 N-terminal NA29_RS23205 64bc038aa2a93ac29a2b55123c53b1e6 107 Pfam PF05449 Putative 3TM holin, Phage_holin_3 7 86 1.8E-26 T 09-03-2017 IPR008473 Putative 3TM holin, Phage holin 3 NA29_RS12210 c320ac972b88cbb4bc5d2b8fbf1c6ca6 343 SUPERFAMILY SSF46955 28 95 6.41E-15 T 09-03-2017 IPR009061 Putative DNA-binding domain NA29_RS12210 c320ac972b88cbb4bc5d2b8fbf1c6ca6 343 SMART SM00422 28 97 3.9E-14 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS12210 c320ac972b88cbb4bc5d2b8fbf1c6ca6 343 Pfam PF13411 MerR HTH family regulatory protein 28 94 3.3E-16 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS12210 c320ac972b88cbb4bc5d2b8fbf1c6ca6 343 Gene3D G3DSA:1.10.1660.10 28 95 3.7E-15 T 09-03-2017 NA29_RS16550 62be25d899e912212cbb97d939ee664b 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 2.5E-16 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS16550 62be25d899e912212cbb97d939ee664b 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 2.5E-16 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS16550 62be25d899e912212cbb97d939ee664b 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 181 202 2.5E-16 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS16550 62be25d899e912212cbb97d939ee664b 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 2.5E-16 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS16550 62be25d899e912212cbb97d939ee664b 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 2.5E-16 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS16550 62be25d899e912212cbb97d939ee664b 265 Pfam PF00459 Inositol monophosphatase family 9 260 8.7E-48 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS16550 62be25d899e912212cbb97d939ee664b 265 Gene3D G3DSA:3.40.190.80 159 264 2.2E-22 T 09-03-2017 NA29_RS16550 62be25d899e912212cbb97d939ee664b 265 TIGRFAM TIGR02067 his_9_HisN: histidinol-phosphatase 11 263 2.7E-86 T 09-03-2017 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase GO:0004401 KEGG: 00340+3.1.3.15 NA29_RS16550 62be25d899e912212cbb97d939ee664b 265 SUPERFAMILY SSF56655 9 264 2.62E-64 T 09-03-2017 NA29_RS16550 62be25d899e912212cbb97d939ee664b 265 Gene3D G3DSA:3.30.540.10 8 158 2.4E-38 T 09-03-2017 NA29_RS16550 62be25d899e912212cbb97d939ee664b 265 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 09-03-2017 IPR020583 Inositol monophosphatase, metal-binding site NA29_RS05480 bebed46da641fe8d29b08fd95e71f806 340 Gene3D G3DSA:3.40.190.10 26 114 3.3E-28 T 09-03-2017 NA29_RS05480 bebed46da641fe8d29b08fd95e71f806 340 Gene3D G3DSA:3.40.190.10 274 339 3.3E-28 T 09-03-2017 NA29_RS05480 bebed46da641fe8d29b08fd95e71f806 340 Gene3D G3DSA:3.40.190.100 117 273 6.4E-38 T 09-03-2017 NA29_RS05480 bebed46da641fe8d29b08fd95e71f806 340 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 31 323 1.4E-48 T 09-03-2017 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 NA29_RS05480 bebed46da641fe8d29b08fd95e71f806 340 SUPERFAMILY SSF53850 26 336 3.6E-61 T 09-03-2017 NA29_RS22345 6096182835447698cb79aa736504031a 103 SUPERFAMILY SSF141091 1 102 1.44E-38 T 09-03-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS22345 6096182835447698cb79aa736504031a 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.14 T 09-03-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS22345 6096182835447698cb79aa736504031a 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 09-03-2017 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS22345 6096182835447698cb79aa736504031a 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.5E-41 T 09-03-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS22345 6096182835447698cb79aa736504031a 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 3.1E-36 T 09-03-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS07540 5ce140848dd4077a89c5b65a96d5de9f 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS07540 5ce140848dd4077a89c5b65a96d5de9f 430 Gene3D G3DSA:3.90.1150.10 323 426 1.7E-38 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS07540 5ce140848dd4077a89c5b65a96d5de9f 430 Gene3D G3DSA:3.90.1150.10 6 62 1.7E-38 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS07540 5ce140848dd4077a89c5b65a96d5de9f 430 SUPERFAMILY SSF53383 19 425 3.98E-130 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS07540 5ce140848dd4077a89c5b65a96d5de9f 430 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 14 424 3.4E-154 T 09-03-2017 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 NA29_RS07540 5ce140848dd4077a89c5b65a96d5de9f 430 Pfam PF00202 Aminotransferase class-III 22 424 1.2E-122 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS07540 5ce140848dd4077a89c5b65a96d5de9f 430 Gene3D G3DSA:3.40.640.10 63 321 9.2E-84 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS19725 cef8a8880b30131f8a61af654805f0c6 221 Gene3D G3DSA:1.10.3720.10 23 216 2.7E-39 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS19725 cef8a8880b30131f8a61af654805f0c6 221 SUPERFAMILY SSF161098 21 215 3.92E-39 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS19725 cef8a8880b30131f8a61af654805f0c6 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 215 1.1E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS19725 cef8a8880b30131f8a61af654805f0c6 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 114 5.7E-16 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NA29_RS23675 5ee41fa1bac836f69e641650f7ee1b0c 819 Gene3D G3DSA:2.40.50.140 370 439 4.6E-27 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS23675 5ee41fa1bac836f69e641650f7ee1b0c 819 Pfam PF17092 Penicillin-binding protein OB-like domain 339 443 1.3E-23 T 09-03-2017 IPR031376 Penicillin-binding protein, OB-like domain NA29_RS23675 5ee41fa1bac836f69e641650f7ee1b0c 819 SUPERFAMILY SSF56601 440 757 1.13E-117 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS23675 5ee41fa1bac836f69e641650f7ee1b0c 819 SUPERFAMILY SSF56601 234 256 1.13E-117 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS23675 5ee41fa1bac836f69e641650f7ee1b0c 819 SUPERFAMILY SSF56601 285 336 1.13E-117 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS23675 5ee41fa1bac836f69e641650f7ee1b0c 819 Gene3D G3DSA:1.10.3810.10 80 255 1.9E-75 T 09-03-2017 NA29_RS23675 5ee41fa1bac836f69e641650f7ee1b0c 819 Pfam PF00912 Transglycosylase 81 252 1.8E-65 T 09-03-2017 IPR001264 Glycosyl transferase, family 51 NA29_RS23675 5ee41fa1bac836f69e641650f7ee1b0c 819 Pfam PF00905 Penicillin binding protein transpeptidase domain 446 691 1.0E-32 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NA29_RS23675 5ee41fa1bac836f69e641650f7ee1b0c 819 Gene3D G3DSA:3.40.710.10 440 753 1.8E-125 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS23675 5ee41fa1bac836f69e641650f7ee1b0c 819 Gene3D G3DSA:3.40.710.10 256 336 1.8E-125 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS23675 5ee41fa1bac836f69e641650f7ee1b0c 819 SUPERFAMILY SSF53955 65 275 1.41E-77 T 09-03-2017 IPR023346 Lysozyme-like domain NA29_RS23675 5ee41fa1bac836f69e641650f7ee1b0c 819 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 88 728 4.0E-185 T 09-03-2017 NA29_RS08445 01f4f2ceabf2fe21975e9957e4ba0919 184 Pfam PF08281 Sigma-70, region 4 111 163 1.6E-14 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08445 01f4f2ceabf2fe21975e9957e4ba0919 184 Pfam PF04542 Sigma-70 region 2 15 79 1.4E-13 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08445 01f4f2ceabf2fe21975e9957e4ba0919 184 SUPERFAMILY SSF88946 8 91 1.69E-16 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08445 01f4f2ceabf2fe21975e9957e4ba0919 184 SUPERFAMILY SSF88659 110 163 8.5E-14 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08445 01f4f2ceabf2fe21975e9957e4ba0919 184 Gene3D G3DSA:1.10.10.10 109 166 4.0E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08445 01f4f2ceabf2fe21975e9957e4ba0919 184 Gene3D G3DSA:1.10.1740.10 6 81 1.5E-18 T 09-03-2017 NA29_RS08445 01f4f2ceabf2fe21975e9957e4ba0919 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 164 4.6E-22 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS06885 dadbe9d4b3d90a4f546b2accb7d3f58f 37 Pfam PF07080 Protein of unknown function (DUF1348) 8 36 7.1E-8 T 09-03-2017 IPR009783 Protein of unknown function DUF1348 NA29_RS06885 dadbe9d4b3d90a4f546b2accb7d3f58f 37 SUPERFAMILY SSF54427 7 37 4.29E-9 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS06885 dadbe9d4b3d90a4f546b2accb7d3f58f 37 Gene3D G3DSA:3.10.450.50 15 37 5.3E-5 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS11590 0be3a9eefa2d3cfcab3793a3bb7153b7 296 SUPERFAMILY SSF46785 14 122 2.46E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11590 0be3a9eefa2d3cfcab3793a3bb7153b7 296 SUPERFAMILY SSF53850 94 293 5.02E-24 T 09-03-2017 NA29_RS11590 0be3a9eefa2d3cfcab3793a3bb7153b7 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 6.8E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11590 0be3a9eefa2d3cfcab3793a3bb7153b7 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 6.8E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11590 0be3a9eefa2d3cfcab3793a3bb7153b7 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 6.8E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11590 0be3a9eefa2d3cfcab3793a3bb7153b7 296 Pfam PF03466 LysR substrate binding domain 98 293 1.0E-24 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS11590 0be3a9eefa2d3cfcab3793a3bb7153b7 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 75 1.2E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11590 0be3a9eefa2d3cfcab3793a3bb7153b7 296 Gene3D G3DSA:1.10.10.10 14 93 6.9E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11590 0be3a9eefa2d3cfcab3793a3bb7153b7 296 Gene3D G3DSA:3.40.190.10 94 185 4.0E-17 T 09-03-2017 NA29_RS19655 8d8481eedc96fc5fa0893ab0a28b7c12 239 Gene3D G3DSA:1.10.10.10 128 230 6.0E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19655 8d8481eedc96fc5fa0893ab0a28b7c12 239 SMART SM00862 151 227 1.4E-20 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS19655 8d8481eedc96fc5fa0893ab0a28b7c12 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 227 1.1E-21 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS19655 8d8481eedc96fc5fa0893ab0a28b7c12 239 SMART SM00448 1 112 7.4E-43 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS19655 8d8481eedc96fc5fa0893ab0a28b7c12 239 Gene3D G3DSA:3.40.50.2300 1 122 3.1E-42 T 09-03-2017 NA29_RS19655 8d8481eedc96fc5fa0893ab0a28b7c12 239 Pfam PF00072 Response regulator receiver domain 3 113 1.0E-30 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS19655 8d8481eedc96fc5fa0893ab0a28b7c12 239 SUPERFAMILY SSF52172 1 126 5.55E-42 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS19655 8d8481eedc96fc5fa0893ab0a28b7c12 239 SUPERFAMILY SSF46894 129 229 1.05E-26 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS01410 0770c92667666f148cf405f9fbc653aa 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 212 7.7E-17 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01410 0770c92667666f148cf405f9fbc653aa 226 SUPERFAMILY SSF161098 17 205 1.64E-41 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01410 0770c92667666f148cf405f9fbc653aa 226 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 111 5.7E-28 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NA29_RS01410 0770c92667666f148cf405f9fbc653aa 226 Gene3D G3DSA:1.10.3720.10 14 216 4.6E-44 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS22525 3bb92333a35f558dbee2df0bed914de1 398 Gene3D G3DSA:3.40.630.10 298 396 1.2E-102 T 09-03-2017 NA29_RS22525 3bb92333a35f558dbee2df0bed914de1 398 Gene3D G3DSA:3.40.630.10 4 178 1.2E-102 T 09-03-2017 NA29_RS22525 3bb92333a35f558dbee2df0bed914de1 398 Pfam PF01546 Peptidase family M20/M25/M40 73 355 8.0E-39 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NA29_RS22525 3bb92333a35f558dbee2df0bed914de1 398 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 381 1.9E-109 T 09-03-2017 IPR017439 Amidohydrolase GO:0016787 NA29_RS22525 3bb92333a35f558dbee2df0bed914de1 398 PIRSF PIRSF005962 1 398 4.7E-128 T 09-03-2017 IPR017439 Amidohydrolase GO:0016787 NA29_RS22525 3bb92333a35f558dbee2df0bed914de1 398 Pfam PF07687 Peptidase dimerisation domain 185 277 1.5E-9 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS22525 3bb92333a35f558dbee2df0bed914de1 398 Gene3D G3DSA:3.30.70.360 181 297 2.2E-38 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS22525 3bb92333a35f558dbee2df0bed914de1 398 SUPERFAMILY SSF55031 181 299 5.63E-29 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS22525 3bb92333a35f558dbee2df0bed914de1 398 SUPERFAMILY SSF53187 2 197 4.86E-88 T 09-03-2017 NA29_RS22525 3bb92333a35f558dbee2df0bed914de1 398 SUPERFAMILY SSF53187 298 396 4.86E-88 T 09-03-2017 NA29_RS16770 6d78e891ce8c84e4376256d08a7f6814 768 Pfam PF13953 PapC C-terminal domain 676 736 7.4E-12 T 09-03-2017 IPR025949 PapC-like, C-terminal domain NA29_RS16770 6d78e891ce8c84e4376256d08a7f6814 768 Pfam PF00577 Outer membrane usher protein 185 383 4.0E-5 T 09-03-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 NA29_RS16770 6d78e891ce8c84e4376256d08a7f6814 768 Pfam PF00577 Outer membrane usher protein 499 667 1.2E-19 T 09-03-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 NA29_RS16770 6d78e891ce8c84e4376256d08a7f6814 768 SUPERFAMILY SSF141729 21 112 4.58E-5 T 09-03-2017 NA29_RS23985 d84f69bbbfc574c82874ba7000c8acb9 264 SUPERFAMILY SSF51621 2 254 6.63E-85 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS23985 d84f69bbbfc574c82874ba7000c8acb9 264 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 6 253 3.4E-114 T 09-03-2017 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52 NA29_RS23985 d84f69bbbfc574c82874ba7000c8acb9 264 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 245 5.3E-62 T 09-03-2017 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 NA29_RS23985 d84f69bbbfc574c82874ba7000c8acb9 264 Gene3D G3DSA:3.20.20.60 2 253 3.2E-81 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS12655 4a2e42d228115071331e7edcf65ed492 529 Gene3D G3DSA:2.30.38.10 344 419 2.1E-17 T 09-03-2017 NA29_RS12655 4a2e42d228115071331e7edcf65ed492 529 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS12655 4a2e42d228115071331e7edcf65ed492 529 Gene3D G3DSA:3.40.50.980 38 189 1.2E-30 T 09-03-2017 NA29_RS12655 4a2e42d228115071331e7edcf65ed492 529 Gene3D G3DSA:3.40.50.980 190 343 2.4E-30 T 09-03-2017 NA29_RS12655 4a2e42d228115071331e7edcf65ed492 529 Pfam PF00501 AMP-binding enzyme 37 426 3.0E-74 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS12655 4a2e42d228115071331e7edcf65ed492 529 Gene3D G3DSA:3.30.300.30 423 516 9.0E-17 T 09-03-2017 NA29_RS12655 4a2e42d228115071331e7edcf65ed492 529 Pfam PF13193 AMP-binding enzyme C-terminal domain 435 507 1.8E-8 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS12655 4a2e42d228115071331e7edcf65ed492 529 SUPERFAMILY SSF56801 36 519 5.49E-114 T 09-03-2017 NA29_RS24995 301aacb61469ceffdeeaf0d099de8b82 225 SUPERFAMILY SSF64438 25 174 2.2E-48 T 09-03-2017 IPR011324 Cytotoxic necrotizing factor-like, catalytic NA29_RS24995 301aacb61469ceffdeeaf0d099de8b82 225 Pfam PF03975 CheD chemotactic sensory transduction 67 172 1.3E-33 T 09-03-2017 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 NA29_RS24995 301aacb61469ceffdeeaf0d099de8b82 225 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 20 176 29.096 T 09-03-2017 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 NA29_RS23455 c2604d8daa2760f407bf37ce6f288039 132 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 54 107 8.0E-25 T 09-03-2017 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 NA29_RS23455 c2604d8daa2760f407bf37ce6f288039 132 SUPERFAMILY SSF141734 4 112 5.36E-47 T 09-03-2017 NA29_RS23455 c2604d8daa2760f407bf37ce6f288039 132 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 5 109 31.523 T 09-03-2017 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 NA29_RS23455 c2604d8daa2760f407bf37ce6f288039 132 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 31 105 1.2E-35 T 09-03-2017 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 NA29_RS02595 4b526c122748a50a6404f51c6c4e6580 534 PIRSF PIRSF006446 2 525 8.4E-148 T 09-03-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 NA29_RS02595 4b526c122748a50a6404f51c6c4e6580 534 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 505 1.0E-177 T 09-03-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 NA29_RS09765 a73840992c34adb0b14522455b56564b 365 Pfam PF03969 AFG1-like ATPase 3 354 4.4E-130 T 09-03-2017 IPR005654 ATPase, AFG1-like GO:0005524 NA29_RS09765 a73840992c34adb0b14522455b56564b 365 SUPERFAMILY SSF52540 47 178 9.67E-16 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09765 a73840992c34adb0b14522455b56564b 365 Gene3D G3DSA:3.40.50.300 11 170 7.6E-20 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18255 8d7581fe5b9c4d741a45b5d0d8c0f874 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 247 2.2E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS18255 8d7581fe5b9c4d741a45b5d0d8c0f874 260 Gene3D G3DSA:1.10.3720.10 51 247 9.0E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS18255 8d7581fe5b9c4d741a45b5d0d8c0f874 260 SUPERFAMILY SSF161098 56 236 1.44E-27 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS10530 f6ac481eb45c26187ee25a5b4cbcfd1d 253 Gene3D G3DSA:3.40.50.1000 5 79 1.5E-42 T 09-03-2017 IPR023214 HAD-like domain NA29_RS10530 f6ac481eb45c26187ee25a5b4cbcfd1d 253 Gene3D G3DSA:3.40.50.1000 158 241 1.5E-42 T 09-03-2017 IPR023214 HAD-like domain NA29_RS10530 f6ac481eb45c26187ee25a5b4cbcfd1d 253 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 203 8.6E-21 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 NA29_RS10530 f6ac481eb45c26187ee25a5b4cbcfd1d 253 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 4 236 6.4E-47 T 09-03-2017 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 NA29_RS10530 f6ac481eb45c26187ee25a5b4cbcfd1d 253 SUPERFAMILY SSF56784 5 235 9.57E-40 T 09-03-2017 IPR023214 HAD-like domain NA29_RS10530 f6ac481eb45c26187ee25a5b4cbcfd1d 253 Pfam PF02358 Trehalose-phosphatase 7 226 2.7E-40 T 09-03-2017 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 NA29_RS11385 6eddc0aaa3c632e2ca866936ee8f736c 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.3E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11385 6eddc0aaa3c632e2ca866936ee8f736c 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 1.3E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11385 6eddc0aaa3c632e2ca866936ee8f736c 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.3E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11385 6eddc0aaa3c632e2ca866936ee8f736c 277 Gene3D G3DSA:3.40.50.720 3 247 3.6E-62 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11385 6eddc0aaa3c632e2ca866936ee8f736c 277 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS11385 6eddc0aaa3c632e2ca866936ee8f736c 277 SUPERFAMILY SSF51735 3 247 4.24E-61 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11385 6eddc0aaa3c632e2ca866936ee8f736c 277 Pfam PF00106 short chain dehydrogenase 5 190 1.9E-47 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11385 6eddc0aaa3c632e2ca866936ee8f736c 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 6.7E-25 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11385 6eddc0aaa3c632e2ca866936ee8f736c 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 6.7E-25 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11385 6eddc0aaa3c632e2ca866936ee8f736c 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 6.7E-25 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11385 6eddc0aaa3c632e2ca866936ee8f736c 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 6.7E-25 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11385 6eddc0aaa3c632e2ca866936ee8f736c 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 6.7E-25 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS21895 4b1e3fec9abcdeeb7411a2b30d0430be 287 Pfam PF00950 ABC 3 transport family 15 274 9.1E-53 T 09-03-2017 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 NA29_RS21895 4b1e3fec9abcdeeb7411a2b30d0430be 287 SUPERFAMILY SSF81345 14 270 3.01E-21 T 09-03-2017 IPR029022 ABC transporter, BtuC-like NA29_RS20365 c1d3c4a39b0121a7c5c001a22a644ae3 129 PIRSF PIRSF016821 6 129 3.3E-39 T 09-03-2017 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 NA29_RS20365 c1d3c4a39b0121a7c5c001a22a644ae3 129 Pfam PF01479 S4 domain 10 55 2.9E-12 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS20365 c1d3c4a39b0121a7c5c001a22a644ae3 129 SUPERFAMILY SSF55174 9 104 3.01E-28 T 09-03-2017 NA29_RS20365 c1d3c4a39b0121a7c5c001a22a644ae3 129 Gene3D G3DSA:3.10.290.10 9 107 1.1E-35 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS20365 c1d3c4a39b0121a7c5c001a22a644ae3 129 SMART SM00363 9 70 7.0E-7 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS18930 ceff144f114cf4be10f4bb0fdcf81282 500 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 73 95 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site NA29_RS18930 ceff144f114cf4be10f4bb0fdcf81282 500 SUPERFAMILY SSF53850 24 499 5.43E-131 T 09-03-2017 NA29_RS18930 ceff144f114cf4be10f4bb0fdcf81282 500 Gene3D G3DSA:3.10.105.10 260 470 1.2E-54 T 09-03-2017 NA29_RS18930 ceff144f114cf4be10f4bb0fdcf81282 500 Gene3D G3DSA:3.90.76.10 35 187 2.6E-38 T 09-03-2017 NA29_RS18930 ceff144f114cf4be10f4bb0fdcf81282 500 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 420 1.9E-90 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain NA29_RS18930 ceff144f114cf4be10f4bb0fdcf81282 500 PIRSF PIRSF002741 8 497 8.7E-109 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 NA29_RS08270 86c17b73a647324f2a68e6ca5d58f522 332 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 3 321 4.2E-94 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 NA29_RS08270 86c17b73a647324f2a68e6ca5d58f522 332 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 4 209 7.0E-40 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 NA29_RS01385 b1c01852c7fce030dce38696e3218be1 101 Pfam PF00699 Urease beta subunit 3 99 5.8E-46 T 09-03-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01385 b1c01852c7fce030dce38696e3218be1 101 Gene3D G3DSA:2.10.150.10 1 100 2.1E-51 T 09-03-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01385 b1c01852c7fce030dce38696e3218be1 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.662 T 09-03-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01385 b1c01852c7fce030dce38696e3218be1 101 SUPERFAMILY SSF51278 1 101 9.42E-48 T 09-03-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS01385 b1c01852c7fce030dce38696e3218be1 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 99 6.5E-48 T 09-03-2017 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 NA29_RS07855 d6d3610fd48c60034d340f6a7eb7aabe 366 Gene3D G3DSA:3.90.1150.10 276 362 1.3E-18 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS07855 d6d3610fd48c60034d340f6a7eb7aabe 366 Pfam PF01212 Beta-eliminating lyase 24 313 6.6E-76 T 09-03-2017 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 NA29_RS07855 d6d3610fd48c60034d340f6a7eb7aabe 366 PIRSF PIRSF038940 21 366 1.8E-153 T 09-03-2017 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 NA29_RS07855 d6d3610fd48c60034d340f6a7eb7aabe 366 SUPERFAMILY SSF53383 23 360 3.71E-99 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS07855 d6d3610fd48c60034d340f6a7eb7aabe 366 Gene3D G3DSA:3.40.640.10 19 273 1.5E-62 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS12015 bf909fcad4b8e14a433c119beab7ef77 302 SUPERFAMILY SSF53271 5 137 6.5E-30 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS12015 bf909fcad4b8e14a433c119beab7ef77 302 Gene3D G3DSA:3.40.50.2020 162 279 1.7E-19 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS12015 bf909fcad4b8e14a433c119beab7ef77 302 SMART SM01400 4 119 1.7E-27 T 09-03-2017 NA29_RS12015 bf909fcad4b8e14a433c119beab7ef77 302 Gene3D G3DSA:3.40.50.2020 1 161 7.2E-25 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS12015 bf909fcad4b8e14a433c119beab7ef77 302 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 9 291 1.8E-47 T 09-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 NA29_RS12015 bf909fcad4b8e14a433c119beab7ef77 302 SUPERFAMILY SSF53271 160 295 3.41E-25 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS12015 bf909fcad4b8e14a433c119beab7ef77 302 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 116 1.7E-16 T 09-03-2017 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 NA29_RS12015 bf909fcad4b8e14a433c119beab7ef77 302 Pfam PF00156 Phosphoribosyl transferase domain 153 272 7.9E-12 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 NA29_RS24380 01bad1e286fbb49d8bd11aef36bbfc88 640 Gene3D G3DSA:3.90.25.10 471 555 1.9E-7 T 09-03-2017 NA29_RS24380 01bad1e286fbb49d8bd11aef36bbfc88 640 SUPERFAMILY SSF51735 282 558 4.47E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS24380 01bad1e286fbb49d8bd11aef36bbfc88 640 Pfam PF02719 Polysaccharide biosynthesis protein 285 579 8.6E-125 T 09-03-2017 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain NA29_RS24380 01bad1e286fbb49d8bd11aef36bbfc88 640 Gene3D G3DSA:3.40.50.720 143 223 7.5E-12 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS24380 01bad1e286fbb49d8bd11aef36bbfc88 640 Pfam PF13727 CoA-binding domain 66 240 1.3E-11 T 09-03-2017 NA29_RS24380 01bad1e286fbb49d8bd11aef36bbfc88 640 SUPERFAMILY SSF53335 111 328 1.61E-19 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS24380 01bad1e286fbb49d8bd11aef36bbfc88 640 Gene3D G3DSA:3.40.50.720 283 470 3.7E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS06245 df1c3267e5fa4a1e7da0602b3b65bb96 225 Pfam PF04891 NifQ 22 181 2.3E-33 T 09-03-2017 IPR006975 NifQ GO:0009399|GO:0030151 NA29_RS06670 f2845e5f26f2cb8811544cf9870da9b1 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 256 4.9E-11 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS06670 f2845e5f26f2cb8811544cf9870da9b1 267 Gene3D G3DSA:1.10.3720.10 11 261 1.8E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS06670 f2845e5f26f2cb8811544cf9870da9b1 267 SUPERFAMILY SSF161098 5 252 1.96E-41 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS22035 8e87c848cdd89bc24cc3800ed521c4e3 327 Gene3D G3DSA:3.40.50.20 164 194 1.6E-4 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS22035 8e87c848cdd89bc24cc3800ed521c4e3 327 SUPERFAMILY SSF52440 164 215 8.78E-5 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS22035 8e87c848cdd89bc24cc3800ed521c4e3 327 Pfam PF02625 XdhC and CoxI family 15 82 3.1E-20 T 09-03-2017 IPR003777 XdhC- CoxI NA29_RS22035 8e87c848cdd89bc24cc3800ed521c4e3 327 Pfam PF13478 XdhC Rossmann domain 166 307 2.2E-35 T 09-03-2017 IPR027051 XdhC Rossmann domain NA29_RS14060 0e742d200556c475259b60f97da7fa98 548 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 511 7.6E-64 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS14060 0e742d200556c475259b60f97da7fa98 548 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 182 1.9E-19 T 09-03-2017 IPR024478 4HB MCP domain NA29_RS14060 0e742d200556c475259b60f97da7fa98 548 SMART SM00304 212 264 1.1E-13 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS14060 0e742d200556c475259b60f97da7fa98 548 Pfam PF00672 HAMP domain 193 260 6.0E-16 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS14060 0e742d200556c475259b60f97da7fa98 548 Gene3D G3DSA:1.10.287.950 282 484 2.6E-63 T 09-03-2017 NA29_RS14060 0e742d200556c475259b60f97da7fa98 548 SMART SM00283 265 512 4.2E-97 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS14060 0e742d200556c475259b60f97da7fa98 548 SUPERFAMILY SSF58104 232 513 9.55E-78 T 09-03-2017 NA29_RS14060 0e742d200556c475259b60f97da7fa98 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 2.0E-60 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS14060 0e742d200556c475259b60f97da7fa98 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 21 46 2.0E-60 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS14060 0e742d200556c475259b60f97da7fa98 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 2.0E-60 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS14060 0e742d200556c475259b60f97da7fa98 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 2.0E-60 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS14060 0e742d200556c475259b60f97da7fa98 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 2.0E-60 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS21695 cea652d07c4c5822eb14d18eea888fcd 293 SUPERFAMILY SSF51735 1 127 3.94E-35 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS21695 cea652d07c4c5822eb14d18eea888fcd 293 SMART SM00881 4 103 6.8E-30 T 09-03-2017 IPR003781 CoA-binding GO:0048037 NA29_RS21695 cea652d07c4c5822eb14d18eea888fcd 293 PIRSF PIRSF001553 1 293 2.7E-116 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NA29_RS21695 cea652d07c4c5822eb14d18eea888fcd 293 Gene3D G3DSA:3.40.50.261 125 292 1.1E-70 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 NA29_RS21695 cea652d07c4c5822eb14d18eea888fcd 293 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 157 186 - T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NA29_RS21695 cea652d07c4c5822eb14d18eea888fcd 293 Pfam PF02629 CoA binding domain 6 102 1.4E-23 T 09-03-2017 IPR003781 CoA-binding GO:0048037 NA29_RS21695 cea652d07c4c5822eb14d18eea888fcd 293 Gene3D G3DSA:3.40.50.720 2 124 5.6E-47 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS21695 cea652d07c4c5822eb14d18eea888fcd 293 Pfam PF00549 CoA-ligase 156 267 3.4E-15 T 09-03-2017 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 NA29_RS21695 cea652d07c4c5822eb14d18eea888fcd 293 PRINTS PR01798 Succinyl-CoA synthase signature 213 226 7.7E-33 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NA29_RS21695 cea652d07c4c5822eb14d18eea888fcd 293 PRINTS PR01798 Succinyl-CoA synthase signature 182 200 7.7E-33 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NA29_RS21695 cea652d07c4c5822eb14d18eea888fcd 293 PRINTS PR01798 Succinyl-CoA synthase signature 245 262 7.7E-33 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NA29_RS21695 cea652d07c4c5822eb14d18eea888fcd 293 PRINTS PR01798 Succinyl-CoA synthase signature 85 102 7.7E-33 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NA29_RS21695 cea652d07c4c5822eb14d18eea888fcd 293 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 241 254 - T 09-03-2017 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site NA29_RS21695 cea652d07c4c5822eb14d18eea888fcd 293 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 292 1.3E-125 T 09-03-2017 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 NA29_RS21695 cea652d07c4c5822eb14d18eea888fcd 293 SUPERFAMILY SSF52210 128 291 1.09E-52 T 09-03-2017 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 NA29_RS14740 c912559914e449fdc1f930b8ee0efe34 395 Gene3D G3DSA:3.40.640.10 6 254 9.8E-95 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS14740 c912559914e449fdc1f930b8ee0efe34 395 PIRSF PIRSF001434 1 395 2.4E-132 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 NA29_RS14740 c912559914e449fdc1f930b8ee0efe34 395 Gene3D G3DSA:3.90.1150.10 256 393 1.9E-47 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS14740 c912559914e449fdc1f930b8ee0efe34 395 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 8 394 55.724 T 09-03-2017 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 NA29_RS14740 c912559914e449fdc1f930b8ee0efe34 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 NA29_RS14740 c912559914e449fdc1f930b8ee0efe34 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 393 1.2E-142 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 NA29_RS14740 c912559914e449fdc1f930b8ee0efe34 395 SUPERFAMILY SSF53383 26 393 3.59E-121 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS14740 c912559914e449fdc1f930b8ee0efe34 395 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 7 392 4.5E-178 T 09-03-2017 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 NA29_RS22855 dff3101b4d1efb9ee01b9221d14b6a0c 551 Pfam PF01584 CheW-like domain 33 176 8.3E-22 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS22855 dff3101b4d1efb9ee01b9221d14b6a0c 551 Pfam PF01584 CheW-like domain 203 330 1.4E-25 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS22855 dff3101b4d1efb9ee01b9221d14b6a0c 551 Pfam PF01584 CheW-like domain 401 539 1.1E-19 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS22855 dff3101b4d1efb9ee01b9221d14b6a0c 551 Gene3D G3DSA:2.40.50.180 71 124 4.1E-5 T 09-03-2017 NA29_RS22855 dff3101b4d1efb9ee01b9221d14b6a0c 551 Gene3D G3DSA:2.40.50.180 242 295 1.6E-6 T 09-03-2017 NA29_RS22855 dff3101b4d1efb9ee01b9221d14b6a0c 551 Gene3D G3DSA:2.40.50.180 438 484 2.8E-7 T 09-03-2017 NA29_RS22855 dff3101b4d1efb9ee01b9221d14b6a0c 551 SUPERFAMILY SSF50341 198 328 3.66E-23 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS22855 dff3101b4d1efb9ee01b9221d14b6a0c 551 SMART SM00260 26 176 1.7E-14 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS22855 dff3101b4d1efb9ee01b9221d14b6a0c 551 SMART SM00260 199 356 4.6E-12 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS22855 dff3101b4d1efb9ee01b9221d14b6a0c 551 SMART SM00260 396 542 1.0E-10 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS22855 dff3101b4d1efb9ee01b9221d14b6a0c 551 SUPERFAMILY SSF50341 403 507 8.76E-21 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS22855 dff3101b4d1efb9ee01b9221d14b6a0c 551 SUPERFAMILY SSF50341 33 178 2.35E-22 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS16355 172229c5e3ba8f428d192a70b3682288 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 13 37 8.4E-8 T 09-03-2017 NA29_RS16355 172229c5e3ba8f428d192a70b3682288 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 8.4E-8 T 09-03-2017 NA29_RS16355 172229c5e3ba8f428d192a70b3682288 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 8.4E-8 T 09-03-2017 NA29_RS16355 172229c5e3ba8f428d192a70b3682288 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 8.4E-8 T 09-03-2017 NA29_RS16355 172229c5e3ba8f428d192a70b3682288 481 Pfam PF07690 Major Facilitator Superfamily 15 406 5.1E-51 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS16355 172229c5e3ba8f428d192a70b3682288 481 SUPERFAMILY SSF103473 10 199 8.37E-62 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS16355 172229c5e3ba8f428d192a70b3682288 481 SUPERFAMILY SSF103473 246 457 8.37E-62 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS16355 172229c5e3ba8f428d192a70b3682288 481 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 410 2.3E-74 T 09-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 NA29_RS16355 172229c5e3ba8f428d192a70b3682288 481 Gene3D G3DSA:1.20.1250.20 262 458 8.6E-11 T 09-03-2017 NA29_RS16355 172229c5e3ba8f428d192a70b3682288 481 Gene3D G3DSA:1.20.1250.20 10 189 3.0E-28 T 09-03-2017 NA29_RS07895 1ff0cf6cd7e5bfc140bb048e1fd59768 323 Pfam PF01636 Phosphotransferase enzyme family 28 262 4.8E-32 T 09-03-2017 IPR002575 Aminoglycoside phosphotransferase NA29_RS07895 1ff0cf6cd7e5bfc140bb048e1fd59768 323 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 312 5.0E-101 T 09-03-2017 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 NA29_RS07895 1ff0cf6cd7e5bfc140bb048e1fd59768 323 Gene3D G3DSA:3.30.200.20 1 102 3.4E-41 T 09-03-2017 NA29_RS07895 1ff0cf6cd7e5bfc140bb048e1fd59768 323 Hamap MF_00301 Homoserine kinase [thrB]. 1 323 158.036 T 09-03-2017 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 NA29_RS07895 1ff0cf6cd7e5bfc140bb048e1fd59768 323 SUPERFAMILY SSF56112 5 316 4.96E-76 T 09-03-2017 IPR011009 Protein kinase-like domain NA29_RS07895 1ff0cf6cd7e5bfc140bb048e1fd59768 323 Gene3D G3DSA:3.90.1200.10 106 318 7.5E-63 T 09-03-2017 NA29_RS01450 aed0fa51a8b46aefc67a503e5cde675b 430 SUPERFAMILY SSF103473 20 425 3.27E-40 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS01450 aed0fa51a8b46aefc67a503e5cde675b 430 Pfam PF07690 Major Facilitator Superfamily 291 425 4.1E-14 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS01450 aed0fa51a8b46aefc67a503e5cde675b 430 Pfam PF07690 Major Facilitator Superfamily 60 268 2.3E-15 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS01450 aed0fa51a8b46aefc67a503e5cde675b 430 Gene3D G3DSA:1.20.1250.20 32 215 1.5E-13 T 09-03-2017 NA29_RS01450 aed0fa51a8b46aefc67a503e5cde675b 430 Gene3D G3DSA:1.20.1250.20 241 423 4.3E-18 T 09-03-2017 NA29_RS22845 60f4a5f02b5cc410e8036e4289a78fa2 280 SUPERFAMILY SSF53335 75 268 3.41E-42 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS22845 60f4a5f02b5cc410e8036e4289a78fa2 280 Gene3D G3DSA:3.40.50.150 74 267 7.8E-54 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS22845 60f4a5f02b5cc410e8036e4289a78fa2 280 SMART SM00138 9 270 4.7E-56 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS22845 60f4a5f02b5cc410e8036e4289a78fa2 280 Pfam PF03705 CheR methyltransferase, all-alpha domain 14 60 8.2E-11 T 09-03-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NA29_RS22845 60f4a5f02b5cc410e8036e4289a78fa2 280 Pfam PF01739 CheR methyltransferase, SAM binding domain 75 261 6.6E-48 T 09-03-2017 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal NA29_RS22845 60f4a5f02b5cc410e8036e4289a78fa2 280 SUPERFAMILY SSF47757 13 74 5.75E-13 T 09-03-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NA29_RS22845 60f4a5f02b5cc410e8036e4289a78fa2 280 Gene3D G3DSA:1.10.155.10 13 73 4.4E-16 T 09-03-2017 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal NA29_RS22845 60f4a5f02b5cc410e8036e4289a78fa2 280 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 7.1E-34 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS22845 60f4a5f02b5cc410e8036e4289a78fa2 280 PRINTS PR00996 Glutamate methyltransferase family signature 107 127 7.1E-34 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS22845 60f4a5f02b5cc410e8036e4289a78fa2 280 PRINTS PR00996 Glutamate methyltransferase family signature 142 158 7.1E-34 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS22845 60f4a5f02b5cc410e8036e4289a78fa2 280 PRINTS PR00996 Glutamate methyltransferase family signature 68 80 7.1E-34 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS22845 60f4a5f02b5cc410e8036e4289a78fa2 280 PRINTS PR00996 Glutamate methyltransferase family signature 31 44 7.1E-34 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS22845 60f4a5f02b5cc410e8036e4289a78fa2 280 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 7.1E-34 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS08320 cef30dbc2bc19c45cd0d2b061c758d28 500 SUPERFAMILY SSF53448 103 372 1.21E-41 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS08320 cef30dbc2bc19c45cd0d2b061c758d28 500 Gene3D G3DSA:3.90.550.10 107 362 1.6E-28 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS08320 cef30dbc2bc19c45cd0d2b061c758d28 500 Pfam PF13641 Glycosyltransferase like family 2 105 348 2.3E-19 T 09-03-2017 NA29_RS18580 78d9ecfab63fcbae2037e469925368b7 298 SUPERFAMILY SSF53850 89 296 2.61E-34 T 09-03-2017 NA29_RS18580 78d9ecfab63fcbae2037e469925368b7 298 Gene3D G3DSA:1.10.10.10 1 77 2.8E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18580 78d9ecfab63fcbae2037e469925368b7 298 SUPERFAMILY SSF46785 3 85 6.31E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18580 78d9ecfab63fcbae2037e469925368b7 298 Pfam PF03466 LysR substrate binding domain 88 291 2.4E-35 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS18580 78d9ecfab63fcbae2037e469925368b7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.6E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18580 78d9ecfab63fcbae2037e469925368b7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.6E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18580 78d9ecfab63fcbae2037e469925368b7 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.6E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18580 78d9ecfab63fcbae2037e469925368b7 298 Gene3D G3DSA:3.40.190.10 89 178 2.7E-20 T 09-03-2017 NA29_RS18580 78d9ecfab63fcbae2037e469925368b7 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.2E-22 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18580 78d9ecfab63fcbae2037e469925368b7 298 Gene3D G3DSA:3.40.190.10 179 270 2.0E-24 T 09-03-2017 NA29_RS14680 630fc8839980ec3723cc5a1aad59967a 287 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 1.3E-60 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS14680 630fc8839980ec3723cc5a1aad59967a 287 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 1.3E-60 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS14680 630fc8839980ec3723cc5a1aad59967a 287 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 1.3E-60 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS14680 630fc8839980ec3723cc5a1aad59967a 287 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 1.3E-60 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS14680 630fc8839980ec3723cc5a1aad59967a 287 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 1.3E-60 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS14680 630fc8839980ec3723cc5a1aad59967a 287 PRINTS PR00377 Inositol monophosphatase superfamily signature 132 155 1.3E-60 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS14680 630fc8839980ec3723cc5a1aad59967a 287 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 09-03-2017 IPR020550 Inositol monophosphatase, conserved site GO:0046854 NA29_RS14680 630fc8839980ec3723cc5a1aad59967a 287 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 09-03-2017 IPR020583 Inositol monophosphatase, metal-binding site NA29_RS14680 630fc8839980ec3723cc5a1aad59967a 287 SUPERFAMILY SSF56655 3 262 1.7E-83 T 09-03-2017 NA29_RS14680 630fc8839980ec3723cc5a1aad59967a 287 Pfam PF00459 Inositol monophosphatase family 2 259 2.3E-68 T 09-03-2017 IPR000760 Inositol monophosphatase GO:0046854 NA29_RS14680 630fc8839980ec3723cc5a1aad59967a 287 Gene3D G3DSA:3.30.540.10 4 159 2.4E-54 T 09-03-2017 NA29_RS14680 630fc8839980ec3723cc5a1aad59967a 287 Gene3D G3DSA:3.40.190.80 160 259 2.7E-35 T 09-03-2017 NA29_RS14680 630fc8839980ec3723cc5a1aad59967a 287 PRINTS PR01959 SuhB family inositol monophosphatase signature 158 184 3.9E-32 T 09-03-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 NA29_RS14680 630fc8839980ec3723cc5a1aad59967a 287 PRINTS PR01959 SuhB family inositol monophosphatase signature 18 40 3.9E-32 T 09-03-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 NA29_RS14680 630fc8839980ec3723cc5a1aad59967a 287 PRINTS PR01959 SuhB family inositol monophosphatase signature 200 212 3.9E-32 T 09-03-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 NA29_RS14680 630fc8839980ec3723cc5a1aad59967a 287 PRINTS PR01959 SuhB family inositol monophosphatase signature 106 125 3.9E-32 T 09-03-2017 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 NA29_RS01505 67c76db2879b08826ffe2e19186d3099 316 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 214 8.8E-26 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NA29_RS01505 67c76db2879b08826ffe2e19186d3099 316 Gene3D G3DSA:3.40.50.720 4 228 3.4E-58 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS01505 67c76db2879b08826ffe2e19186d3099 316 SUPERFAMILY SSF51735 3 257 5.95E-60 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS15905 d5c3af5da3bc71978f090ce21e79c04d 540 Pfam PF04471 Restriction endonuclease 402 515 1.5E-6 T 09-03-2017 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 NA29_RS15905 d5c3af5da3bc71978f090ce21e79c04d 540 Gene3D G3DSA:3.40.1350.10 466 516 5.2E-4 T 09-03-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 NA29_RS03690 cab1e5b8e375ce27d5890e78dcb286cb 287 Pfam PF13649 Methyltransferase domain 56 149 1.2E-18 T 09-03-2017 NA29_RS03690 cab1e5b8e375ce27d5890e78dcb286cb 287 Gene3D G3DSA:3.40.50.150 36 263 1.0E-36 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS03690 cab1e5b8e375ce27d5890e78dcb286cb 287 SUPERFAMILY SSF53335 12 221 1.31E-35 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS13490 6551861e7ed5cd583ad16fc66e08ced8 129 Gene3D G3DSA:3.40.1230.10 2 124 1.6E-43 T 09-03-2017 IPR007523 NDUFAF3/Mth938 domain-containing protein NA29_RS13490 6551861e7ed5cd583ad16fc66e08ced8 129 SUPERFAMILY SSF64076 8 123 1.7E-35 T 09-03-2017 IPR007523 NDUFAF3/Mth938 domain-containing protein NA29_RS13490 6551861e7ed5cd583ad16fc66e08ced8 129 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 15 121 1.6E-32 T 09-03-2017 IPR007523 NDUFAF3/Mth938 domain-containing protein NA29_RS20225 eac432525c1a59ce6d71dd1d206377e4 223 Pfam PF09335 SNARE associated Golgi protein 49 173 2.0E-23 T 09-03-2017 IPR032816 SNARE associated Golgi protein NA29_RS08780 1eb3b5250881fb5a85b104f9f62381ec 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 1.0E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08780 1eb3b5250881fb5a85b104f9f62381ec 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 1.0E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08780 1eb3b5250881fb5a85b104f9f62381ec 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 1.0E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08780 1eb3b5250881fb5a85b104f9f62381ec 260 SUPERFAMILY SSF51735 15 258 2.28E-74 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS08780 1eb3b5250881fb5a85b104f9f62381ec 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 257 3.7E-59 T 09-03-2017 NA29_RS08780 1eb3b5250881fb5a85b104f9f62381ec 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS08780 1eb3b5250881fb5a85b104f9f62381ec 260 Gene3D G3DSA:3.40.50.720 8 259 1.3E-79 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS08780 1eb3b5250881fb5a85b104f9f62381ec 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 1.0E-44 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08780 1eb3b5250881fb5a85b104f9f62381ec 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.0E-44 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08780 1eb3b5250881fb5a85b104f9f62381ec 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.0E-44 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08780 1eb3b5250881fb5a85b104f9f62381ec 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.0E-44 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08780 1eb3b5250881fb5a85b104f9f62381ec 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 1.0E-44 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08780 1eb3b5250881fb5a85b104f9f62381ec 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.0E-44 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08780 1eb3b5250881fb5a85b104f9f62381ec 260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 16 198 0.0021 T 09-03-2017 NA29_RS18450 47e2feb38e8e639d1f2ba53a777c5cb8 233 PIRSF PIRSF039137 1 233 5.2E-105 T 09-03-2017 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 NA29_RS18450 47e2feb38e8e639d1f2ba53a777c5cb8 233 SMART SM00382 26 227 7.2E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS18450 47e2feb38e8e639d1f2ba53a777c5cb8 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS18450 47e2feb38e8e639d1f2ba53a777c5cb8 233 SUPERFAMILY SSF52540 2 230 2.92E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18450 47e2feb38e8e639d1f2ba53a777c5cb8 233 Pfam PF00005 ABC transporter 17 161 1.4E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS18450 47e2feb38e8e639d1f2ba53a777c5cb8 233 Gene3D G3DSA:3.40.50.300 1 229 7.2E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03240 c3e749b737b49191d10e44bf98b61eed 287 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 116 2.9E-6 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NA29_RS03240 c3e749b737b49191d10e44bf98b61eed 287 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 139 245 1.0E-14 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NA29_RS03240 c3e749b737b49191d10e44bf98b61eed 287 Gene3D G3DSA:3.10.180.10 134 256 2.0E-31 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS03240 c3e749b737b49191d10e44bf98b61eed 287 Gene3D G3DSA:3.10.180.10 7 123 5.7E-23 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS03240 c3e749b737b49191d10e44bf98b61eed 287 SUPERFAMILY SSF54593 3 247 3.19E-29 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 310 337 1.5E-49 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 244 258 1.5E-49 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 472 491 1.5E-49 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 276 290 1.5E-49 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 212 232 1.5E-49 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 Pfam PF11638 DnaA N-terminal domain 3 65 8.2E-18 T 09-03-2017 IPR024633 DnaA N-terminal domain NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 Gene3D G3DSA:1.10.1750.10 413 513 2.4E-42 T 09-03-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 ProSitePatterns PS01008 DnaA protein signature. 472 491 - T 09-03-2017 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 SMART SM00382 211 345 4.3E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 513 31.892 T 09-03-2017 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 423 491 1.2E-32 T 09-03-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 Pfam PF00308 Bacterial dnaA protein 179 396 9.0E-86 T 09-03-2017 IPR013317 Chromosomal replication initiator protein DnaA NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 Gene3D G3DSA:1.10.8.60 345 412 3.4E-27 T 09-03-2017 NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 SMART SM00760 422 491 3.9E-44 T 09-03-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 512 5.1E-171 T 09-03-2017 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 SUPERFAMILY SSF52540 178 390 5.25E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 Gene3D G3DSA:3.40.50.300 171 343 1.3E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00005 a41b4ce7bc79b75d252aafd15cb3403e 514 SUPERFAMILY SSF48295 410 513 3.66E-38 T 09-03-2017 IPR010921 Trp repressor/replication initiator GO:0043565 NA29_RS02765 9b4c8a9364a83f6e4809b16b9c35b3c3 161 PIRSF PIRSF006118 1 160 1.6E-62 T 09-03-2017 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 NA29_RS02765 9b4c8a9364a83f6e4809b16b9c35b3c3 161 Pfam PF08282 haloacid dehalogenase-like hydrolase 67 140 3.5E-7 T 09-03-2017 IPR023214 HAD-like domain NA29_RS02765 9b4c8a9364a83f6e4809b16b9c35b3c3 161 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 2 150 2.0E-44 T 09-03-2017 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 NA29_RS02765 9b4c8a9364a83f6e4809b16b9c35b3c3 161 Gene3D G3DSA:3.40.50.1000 2 158 3.6E-37 T 09-03-2017 IPR023214 HAD-like domain NA29_RS02765 9b4c8a9364a83f6e4809b16b9c35b3c3 161 SUPERFAMILY SSF56784 2 154 3.72E-36 T 09-03-2017 IPR023214 HAD-like domain NA29_RS20335 802dfaa7a9a799849810e29ba7d6c19a 642 SUPERFAMILY SSF56752 369 635 1.96E-51 T 09-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 NA29_RS20335 802dfaa7a9a799849810e29ba7d6c19a 642 Gene3D G3DSA:3.30.470.10 426 481 8.4E-6 T 09-03-2017 NA29_RS20335 802dfaa7a9a799849810e29ba7d6c19a 642 Gene3D G3DSA:3.60.120.10 29 424 1.4E-120 T 09-03-2017 IPR005801 ADC synthase GO:0009058 NA29_RS20335 802dfaa7a9a799849810e29ba7d6c19a 642 SUPERFAMILY SSF56322 42 422 5.89E-99 T 09-03-2017 IPR005801 ADC synthase GO:0009058 NA29_RS20335 802dfaa7a9a799849810e29ba7d6c19a 642 PRINTS PR00095 Anthranilate synthase component I signature 266 279 2.9E-10 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 NA29_RS20335 802dfaa7a9a799849810e29ba7d6c19a 642 PRINTS PR00095 Anthranilate synthase component I signature 252 265 2.9E-10 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 NA29_RS20335 802dfaa7a9a799849810e29ba7d6c19a 642 PRINTS PR00095 Anthranilate synthase component I signature 346 360 2.9E-10 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 NA29_RS20335 802dfaa7a9a799849810e29ba7d6c19a 642 Pfam PF00425 chorismate binding enzyme 145 417 1.0E-79 T 09-03-2017 IPR015890 Chorismate-utilising enzyme, C-terminal NA29_RS20335 802dfaa7a9a799849810e29ba7d6c19a 642 Gene3D G3DSA:3.20.10.10 521 630 5.8E-31 T 09-03-2017 NA29_RS20335 802dfaa7a9a799849810e29ba7d6c19a 642 Pfam PF01063 Amino-transferase class IV 430 635 3.1E-43 T 09-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 NA29_RS02040 c6748d8be93cb49ff6595c8a162de01e 398 ProSitePatterns PS00099 Thiolases active site. 379 392 - T 09-03-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 NA29_RS02040 c6748d8be93cb49ff6595c8a162de01e 398 Gene3D G3DSA:3.40.47.10 282 397 1.2E-57 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS02040 c6748d8be93cb49ff6595c8a162de01e 398 Gene3D G3DSA:3.40.47.10 148 200 1.2E-57 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS02040 c6748d8be93cb49ff6595c8a162de01e 398 PIRSF PIRSF000429 4 398 2.7E-115 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS02040 c6748d8be93cb49ff6595c8a162de01e 398 Gene3D G3DSA:3.40.47.10 10 129 3.7E-72 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS02040 c6748d8be93cb49ff6595c8a162de01e 398 Gene3D G3DSA:3.40.47.10 201 281 3.7E-72 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS02040 c6748d8be93cb49ff6595c8a162de01e 398 Pfam PF00108 Thiolase, N-terminal domain 10 268 1.9E-87 T 09-03-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 NA29_RS02040 c6748d8be93cb49ff6595c8a162de01e 398 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 12 396 3.0E-128 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS02040 c6748d8be93cb49ff6595c8a162de01e 398 SUPERFAMILY SSF53901 10 275 1.8E-82 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS02040 c6748d8be93cb49ff6595c8a162de01e 398 SUPERFAMILY SSF53901 276 397 6.1E-41 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS02040 c6748d8be93cb49ff6595c8a162de01e 398 Pfam PF02803 Thiolase, C-terminal domain 275 396 3.4E-43 T 09-03-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 NA29_RS20850 e5497e69431d36da92bacdda7c3179e4 410 SUPERFAMILY SSF51735 263 395 2.52E-24 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS20850 e5497e69431d36da92bacdda7c3179e4 410 SUPERFAMILY SSF81324 139 286 7.46E-21 T 09-03-2017 NA29_RS20850 e5497e69431d36da92bacdda7c3179e4 410 Pfam PF02254 TrkA-N domain 266 378 2.8E-19 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 NA29_RS20850 e5497e69431d36da92bacdda7c3179e4 410 Gene3D G3DSA:1.10.287.70 154 240 1.2E-16 T 09-03-2017 NA29_RS20850 e5497e69431d36da92bacdda7c3179e4 410 Gene3D G3DSA:3.40.50.720 262 396 3.2E-29 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS20850 e5497e69431d36da92bacdda7c3179e4 410 Pfam PF07885 Ion channel 167 241 1.6E-15 T 09-03-2017 IPR013099 Potassium channel domain NA29_RS03535 ed9327f6b674f84dd3232982fac6dd04 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.8E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03535 ed9327f6b674f84dd3232982fac6dd04 317 Gene3D G3DSA:3.40.190.10 191 259 3.5E-16 T 09-03-2017 NA29_RS03535 ed9327f6b674f84dd3232982fac6dd04 317 Gene3D G3DSA:3.40.190.10 87 190 1.0E-21 T 09-03-2017 NA29_RS03535 ed9327f6b674f84dd3232982fac6dd04 317 SUPERFAMILY SSF53850 87 295 7.91E-32 T 09-03-2017 NA29_RS03535 ed9327f6b674f84dd3232982fac6dd04 317 Gene3D G3DSA:1.10.10.10 1 84 2.7E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03535 ed9327f6b674f84dd3232982fac6dd04 317 Pfam PF03466 LysR substrate binding domain 85 282 5.7E-31 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS03535 ed9327f6b674f84dd3232982fac6dd04 317 SUPERFAMILY SSF46785 1 84 1.31E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01480 2fd1a4fd9c74bbc7d9688ebc350e226a 247 SUPERFAMILY SSF88713 2 246 1.11E-93 T 09-03-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NA29_RS01480 2fd1a4fd9c74bbc7d9688ebc350e226a 247 Pfam PF03746 LamB/YcsF family 4 236 7.8E-93 T 09-03-2017 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF NA29_RS01480 2fd1a4fd9c74bbc7d9688ebc350e226a 247 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 241 43.106 T 09-03-2017 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF NA29_RS18505 2d09a50acacb90a2a04c498a8716ba8e 638 SMART SM00052 47 294 1.5E-29 T 09-03-2017 IPR001633 EAL domain NA29_RS18505 2d09a50acacb90a2a04c498a8716ba8e 638 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 475 544 3.1E-11 T 09-03-2017 IPR000160 GGDEF domain NA29_RS18505 2d09a50acacb90a2a04c498a8716ba8e 638 Pfam PF00563 EAL domain 61 287 5.8E-47 T 09-03-2017 IPR001633 EAL domain NA29_RS18505 2d09a50acacb90a2a04c498a8716ba8e 638 Gene3D G3DSA:3.10.580.10 327 451 2.1E-8 T 09-03-2017 NA29_RS18505 2d09a50acacb90a2a04c498a8716ba8e 638 SUPERFAMILY SSF141868 60 290 4.97E-56 T 09-03-2017 IPR001633 EAL domain NA29_RS18505 2d09a50acacb90a2a04c498a8716ba8e 638 SUPERFAMILY SSF55073 462 630 3.14E-21 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS18505 2d09a50acacb90a2a04c498a8716ba8e 638 Pfam PF00990 Diguanylate cyclase, GGDEF domain 481 559 2.5E-11 T 09-03-2017 IPR000160 GGDEF domain NA29_RS18505 2d09a50acacb90a2a04c498a8716ba8e 638 Gene3D G3DSA:3.30.70.270 460 631 5.5E-23 T 09-03-2017 NA29_RS18505 2d09a50acacb90a2a04c498a8716ba8e 638 SMART SM00267 451 632 8.7E-7 T 09-03-2017 IPR000160 GGDEF domain NA29_RS18505 2d09a50acacb90a2a04c498a8716ba8e 638 Gene3D G3DSA:3.20.20.450 59 289 3.3E-51 T 09-03-2017 IPR001633 EAL domain NA29_RS18505 2d09a50acacb90a2a04c498a8716ba8e 638 SUPERFAMILY SSF54631 331 454 7.46E-7 T 09-03-2017 NA29_RS13195 d1230dc2f11c423c017cc41a72b9ddaa 152 Gene3D G3DSA:3.10.129.10 5 149 5.1E-59 T 09-03-2017 IPR029069 HotDog domain NA29_RS13195 d1230dc2f11c423c017cc41a72b9ddaa 152 SUPERFAMILY SSF54637 10 150 1.98E-48 T 09-03-2017 IPR029069 HotDog domain NA29_RS13195 d1230dc2f11c423c017cc41a72b9ddaa 152 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 34.852 T 09-03-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NA29_RS13195 d1230dc2f11c423c017cc41a72b9ddaa 152 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 147 2.1E-60 T 09-03-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NA29_RS13195 d1230dc2f11c423c017cc41a72b9ddaa 152 Pfam PF07977 FabA-like domain 17 142 9.7E-37 T 09-03-2017 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NA29_RS04855 39cff644122daf048b8ac35d1a6d0950 360 Gene3D G3DSA:2.40.10.240 67 135 8.4E-13 T 09-03-2017 NA29_RS04855 39cff644122daf048b8ac35d1a6d0950 360 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 347 1.4E-126 T 09-03-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 NA29_RS04855 39cff644122daf048b8ac35d1a6d0950 360 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 2 348 45.566 T 09-03-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 NA29_RS04855 39cff644122daf048b8ac35d1a6d0950 360 Gene3D G3DSA:3.40.1780.10 178 347 1.2E-94 T 09-03-2017 NA29_RS04855 39cff644122daf048b8ac35d1a6d0950 360 Gene3D G3DSA:3.40.1780.10 3 65 1.2E-94 T 09-03-2017 NA29_RS04855 39cff644122daf048b8ac35d1a6d0950 360 SUPERFAMILY SSF111337 3 347 1.05E-128 T 09-03-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 NA29_RS04855 39cff644122daf048b8ac35d1a6d0950 360 Pfam PF02547 Queuosine biosynthesis protein 4 347 1.0E-128 T 09-03-2017 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 NA29_RS14340 869488c6cbffa18918e35e0179373652 692 Gene3D G3DSA:1.20.1050.40 15 142 6.6E-19 T 09-03-2017 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal NA29_RS14340 869488c6cbffa18918e35e0179373652 692 Gene3D G3DSA:1.10.1370.10 511 690 3.3E-136 T 09-03-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 NA29_RS14340 869488c6cbffa18918e35e0179373652 692 Gene3D G3DSA:1.10.1370.10 145 357 3.3E-136 T 09-03-2017 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 NA29_RS14340 869488c6cbffa18918e35e0179373652 692 SUPERFAMILY SSF55486 6 688 1.83E-196 T 09-03-2017 NA29_RS14340 869488c6cbffa18918e35e0179373652 692 Pfam PF01432 Peptidase family M3 226 688 2.5E-143 T 09-03-2017 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 NA29_RS14340 869488c6cbffa18918e35e0179373652 692 Gene3D G3DSA:3.40.390.10 366 510 8.7E-58 T 09-03-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NA29_RS13390 84014d537f471dd2ab33bdf4f3d7f9a3 531 Gene3D G3DSA:1.20.1220.12 414 525 4.6E-31 T 09-03-2017 NA29_RS13390 84014d537f471dd2ab33bdf4f3d7f9a3 531 SUPERFAMILY SSF51645 17 531 6.28E-183 T 09-03-2017 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS13390 84014d537f471dd2ab33bdf4f3d7f9a3 531 Pfam PF01274 Malate synthase 18 531 3.0E-196 T 09-03-2017 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS13390 84014d537f471dd2ab33bdf4f3d7f9a3 531 Gene3D G3DSA:3.20.20.360 74 409 7.4E-108 T 09-03-2017 NA29_RS13390 84014d537f471dd2ab33bdf4f3d7f9a3 531 PIRSF PIRSF001363 8 531 8.6E-245 T 09-03-2017 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS13390 84014d537f471dd2ab33bdf4f3d7f9a3 531 ProSitePatterns PS00510 Malate synthase signature. 266 281 - T 09-03-2017 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS13390 84014d537f471dd2ab33bdf4f3d7f9a3 531 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 25 531 2.1E-230 T 09-03-2017 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS20510 6d3830ff01156299b175ff7f4c683041 217 SUPERFAMILY SSF161098 12 202 2.62E-39 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS20510 6d3830ff01156299b175ff7f4c683041 217 Gene3D G3DSA:1.10.3720.10 11 213 2.6E-37 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS20510 6d3830ff01156299b175ff7f4c683041 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 212 3.3E-14 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS20510 6d3830ff01156299b175ff7f4c683041 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 107 2.4E-25 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NA29_RS08140 4e401f477dde758c4f879485b3fa3a86 315 Pfam PF12833 Helix-turn-helix domain 229 307 8.5E-18 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS08140 4e401f477dde758c4f879485b3fa3a86 315 SMART SM00342 223 306 2.5E-19 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS08140 4e401f477dde758c4f879485b3fa3a86 315 Gene3D G3DSA:3.40.50.880 3 212 2.4E-52 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS08140 4e401f477dde758c4f879485b3fa3a86 315 SUPERFAMILY SSF52317 3 189 1.86E-44 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS08140 4e401f477dde758c4f879485b3fa3a86 315 SUPERFAMILY SSF46689 206 253 1.75E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08140 4e401f477dde758c4f879485b3fa3a86 315 SUPERFAMILY SSF46689 259 308 3.45E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08140 4e401f477dde758c4f879485b3fa3a86 315 Gene3D G3DSA:1.10.10.60 261 305 1.4E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08140 4e401f477dde758c4f879485b3fa3a86 315 Pfam PF01965 DJ-1/PfpI family 35 168 5.6E-19 T 09-03-2017 IPR002818 DJ-1/PfpI NA29_RS08140 4e401f477dde758c4f879485b3fa3a86 315 Gene3D G3DSA:1.10.10.60 213 260 3.5E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS07425 7743e1c61780d4501e38c53d2972ce06 280 SUPERFAMILY SSF53474 11 271 3.72E-48 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS07425 7743e1c61780d4501e38c53d2972ce06 280 Pfam PF00561 alpha/beta hydrolase fold 34 258 1.8E-22 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS07425 7743e1c61780d4501e38c53d2972ce06 280 Gene3D G3DSA:3.40.50.1820 11 271 5.1E-51 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS06825 cf11b2f2fd23eb71300ee3ceebf92ce7 188 Pfam PF03061 Thioesterase superfamily 94 170 2.4E-10 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 NA29_RS06825 cf11b2f2fd23eb71300ee3ceebf92ce7 188 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 64 179 1.3E-22 T 09-03-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 NA29_RS06825 cf11b2f2fd23eb71300ee3ceebf92ce7 188 Gene3D G3DSA:3.10.129.10 45 181 7.2E-49 T 09-03-2017 IPR029069 HotDog domain NA29_RS06825 cf11b2f2fd23eb71300ee3ceebf92ce7 188 SUPERFAMILY SSF54637 19 179 4.33E-32 T 09-03-2017 IPR029069 HotDog domain NA29_RS13915 112874da9440e3c507bea74f20b6f44f 290 Gene3D G3DSA:3.40.50.150 1 286 1.2E-111 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS13915 112874da9440e3c507bea74f20b6f44f 290 SUPERFAMILY SSF53335 9 286 1.83E-87 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS13915 112874da9440e3c507bea74f20b6f44f 290 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 277 38.323 T 09-03-2017 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 NA29_RS13915 112874da9440e3c507bea74f20b6f44f 290 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 281 8.5E-70 T 09-03-2017 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 NA29_RS00560 7252bc699e2d21caaeab575a8bd19ad8 233 SUPERFAMILY SSF52540 2 228 2.77E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00560 7252bc699e2d21caaeab575a8bd19ad8 233 Pfam PF00005 ABC transporter 18 158 1.6E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS00560 7252bc699e2d21caaeab575a8bd19ad8 233 SMART SM00382 27 196 0.0024 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS00560 7252bc699e2d21caaeab575a8bd19ad8 233 Gene3D G3DSA:3.40.50.300 2 226 1.1E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00560 7252bc699e2d21caaeab575a8bd19ad8 233 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS24195 9dd522439d0cbe76a1052ecd20e29522 218 SUPERFAMILY SSF55729 23 160 3.31E-19 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS24195 9dd522439d0cbe76a1052ecd20e29522 218 Pfam PF00583 Acetyltransferase (GNAT) family 85 159 5.2E-7 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS24195 9dd522439d0cbe76a1052ecd20e29522 218 Gene3D G3DSA:3.40.630.30 21 161 1.6E-20 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS10250 5befbf7ea5fe8b2430d27fcd735e9fc9 155 Pfam PF08909 Domain of unknown function (DUF1854) 25 154 1.5E-50 T 09-03-2017 IPR015005 Domain of unknown function DUF1854 NA29_RS06330 2c184a6c613ee6f641a29175ca116d27 141 Gene3D G3DSA:2.20.25.10 1 47 3.0E-25 T 09-03-2017 NA29_RS06330 2c184a6c613ee6f641a29175ca116d27 141 Gene3D G3DSA:3.30.300.20 48 140 1.4E-35 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta NA29_RS06330 2c184a6c613ee6f641a29175ca116d27 141 SUPERFAMILY SSF82784 1 140 5.1E-44 T 09-03-2017 IPR003718 OsmC/Ohr family NA29_RS06330 2c184a6c613ee6f641a29175ca116d27 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 1.9E-55 T 09-03-2017 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 NA29_RS06330 2c184a6c613ee6f641a29175ca116d27 141 Pfam PF02566 OsmC-like protein 45 138 4.1E-15 T 09-03-2017 IPR003718 OsmC/Ohr family NA29_RS02575 9aa3d394b6b4258d43f28d0a5371ab02 301 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 13 294 18.863 T 09-03-2017 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 NA29_RS02575 9aa3d394b6b4258d43f28d0a5371ab02 301 Pfam PF01040 UbiA prenyltransferase family 29 275 2.3E-59 T 09-03-2017 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 NA29_RS02575 9aa3d394b6b4258d43f28d0a5371ab02 301 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 16 292 5.9E-91 T 09-03-2017 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 NA29_RS12640 d07e9af7354b91386ff90207814ca079 881 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 408 881 9.4E-59 T 09-03-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 NA29_RS12640 d07e9af7354b91386ff90207814ca079 881 SMART SM00869 607 868 3.5E-30 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS12640 d07e9af7354b91386ff90207814ca079 881 Gene3D G3DSA:2.160.20.20 32 528 2.1E-23 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS12640 d07e9af7354b91386ff90207814ca079 881 Gene3D G3DSA:2.40.128.130 561 881 2.6E-59 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS12640 d07e9af7354b91386ff90207814ca079 881 SUPERFAMILY SSF51126 30 524 2.23E-21 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS12640 d07e9af7354b91386ff90207814ca079 881 Pfam PF03797 Autotransporter beta-domain 609 859 3.6E-35 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS12640 d07e9af7354b91386ff90207814ca079 881 SUPERFAMILY SSF103515 582 881 1.57E-35 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS09850 137c9851f70eb0543a39121ba9112689 456 SUPERFAMILY SSF52540 69 394 1.04E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09850 137c9851f70eb0543a39121ba9112689 456 Gene3D G3DSA:3.30.450.90 86 183 2.2E-31 T 09-03-2017 NA29_RS09850 137c9851f70eb0543a39121ba9112689 456 Pfam PF00437 Type II/IV secretion system protein 90 365 8.2E-81 T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 NA29_RS09850 137c9851f70eb0543a39121ba9112689 456 Gene3D G3DSA:3.40.50.300 186 397 1.4E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07550 3585fec297509a7bd923753a44853313 526 Pfam PF13556 PucR C-terminal helix-turn-helix domain 461 518 4.8E-16 T 09-03-2017 IPR025736 PucR C-terminal helix-turn-helix domain NA29_RS07550 3585fec297509a7bd923753a44853313 526 Pfam PF07905 Purine catabolism regulatory protein-like family 7 124 1.9E-32 T 09-03-2017 IPR012914 Purine catabolism PurC-like domain NA29_RS05900 611e94f09b94aabfed12d0020032080d 482 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 474 5.9E-105 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NA29_RS05900 611e94f09b94aabfed12d0020032080d 482 SUPERFAMILY SSF56954 59 476 1.7E-103 T 09-03-2017 NA29_RS05900 611e94f09b94aabfed12d0020032080d 482 SUPERFAMILY SSF56954 2 29 1.7E-103 T 09-03-2017 NA29_RS05900 611e94f09b94aabfed12d0020032080d 482 Pfam PF02321 Outer membrane efflux protein 70 262 9.6E-27 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS05900 611e94f09b94aabfed12d0020032080d 482 Pfam PF02321 Outer membrane efflux protein 292 472 2.9E-25 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS05900 611e94f09b94aabfed12d0020032080d 482 Gene3D G3DSA:1.20.1600.10 56 476 4.2E-104 T 09-03-2017 NA29_RS24920 f0175e0b2a7bbdb362b1f9c7b0a472ed 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 09-03-2017 IPR019776 Flagellar basal body rod protein, conserved site NA29_RS24920 f0175e0b2a7bbdb362b1f9c7b0a472ed 134 Pfam PF00460 Flagella basal body rod protein 7 37 4.2E-10 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 NA29_RS24920 f0175e0b2a7bbdb362b1f9c7b0a472ed 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 86 130 2.6E-15 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NA29_RS24920 f0175e0b2a7bbdb362b1f9c7b0a472ed 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 134 6.8E-54 T 09-03-2017 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 NA29_RS13800 661b9caef7c8aa2c4badbc8050d95f5e 330 Pfam PF02239 Cytochrome D1 heme domain 29 322 3.7E-10 T 09-03-2017 NA29_RS13800 661b9caef7c8aa2c4badbc8050d95f5e 330 Gene3D G3DSA:2.130.10.10 26 321 6.4E-51 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NA29_RS13800 661b9caef7c8aa2c4badbc8050d95f5e 330 SUPERFAMILY SSF50974 12 323 1.2E-70 T 09-03-2017 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 NA29_RS08435 22dafbe243084baa23f7bca093068824 152 PRINTS PR00813 Bacterial general secretion pathway protein G signature 58 76 7.9E-15 T 09-03-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 NA29_RS08435 22dafbe243084baa23f7bca093068824 152 PRINTS PR00813 Bacterial general secretion pathway protein G signature 22 47 7.9E-15 T 09-03-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 NA29_RS08435 22dafbe243084baa23f7bca093068824 152 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 21 151 1.8E-50 T 09-03-2017 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 NA29_RS08435 22dafbe243084baa23f7bca093068824 152 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 42 1.5E-9 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site NA29_RS08435 22dafbe243084baa23f7bca093068824 152 Gene3D G3DSA:3.30.700.10 23 92 8.2E-11 T 09-03-2017 NA29_RS08435 22dafbe243084baa23f7bca093068824 152 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 17 40 8.2E-9 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site NA29_RS08435 22dafbe243084baa23f7bca093068824 152 Pfam PF08334 Type II secretion system (T2SS), protein G 46 151 5.2E-41 T 09-03-2017 IPR013545 Type II secretion system protein G NA29_RS08435 22dafbe243084baa23f7bca093068824 152 SUPERFAMILY SSF54523 49 150 1.15E-33 T 09-03-2017 NA29_RS18935 e6985c7ec9be4e8556e693c0fab0885e 368 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS18935 e6985c7ec9be4e8556e693c0fab0885e 368 SMART SM00382 45 237 1.1E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS18935 e6985c7ec9be4e8556e693c0fab0885e 368 Pfam PF00005 ABC transporter 37 187 4.1E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS18935 e6985c7ec9be4e8556e693c0fab0885e 368 Gene3D G3DSA:3.40.50.300 9 262 1.8E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18935 e6985c7ec9be4e8556e693c0fab0885e 368 SUPERFAMILY SSF52540 10 259 7.59E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18935 e6985c7ec9be4e8556e693c0fab0885e 368 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 304 4.7E-20 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS18935 e6985c7ec9be4e8556e693c0fab0885e 368 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 324 1.1E-25 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS21600 5e81098ee62e4667514fc166e2107173 322 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 309 3.7E-46 T 09-03-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 NA29_RS21600 5e81098ee62e4667514fc166e2107173 322 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 318 4.6E-112 T 09-03-2017 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 NA29_RS21600 5e81098ee62e4667514fc166e2107173 322 SUPERFAMILY SSF53756 3 317 5.96E-64 T 09-03-2017 NA29_RS21600 5e81098ee62e4667514fc166e2107173 322 Gene3D G3DSA:3.40.50.2000 3 159 5.7E-32 T 09-03-2017 NA29_RS21600 5e81098ee62e4667514fc166e2107173 322 Gene3D G3DSA:3.40.50.2000 170 308 7.0E-32 T 09-03-2017 NA29_RS23385 55e3fe21919109d5c4f5d0c0188b2349 152 SUPERFAMILY SSF101738 3 109 2.88E-45 T 09-03-2017 IPR007481 Stringent starvation protein B NA29_RS23385 55e3fe21919109d5c4f5d0c0188b2349 152 Pfam PF04386 Stringent starvation protein B 5 152 2.2E-37 T 09-03-2017 IPR007481 Stringent starvation protein B NA29_RS23385 55e3fe21919109d5c4f5d0c0188b2349 152 Gene3D G3DSA:2.30.30.220 2 105 2.6E-47 T 09-03-2017 IPR007481 Stringent starvation protein B NA29_RS23385 55e3fe21919109d5c4f5d0c0188b2349 152 PIRSF PIRSF005276 1 152 6.0E-52 T 09-03-2017 IPR007481 Stringent starvation protein B NA29_RS18895 9dcf808a13a217ccaf9cb6e566a81c07 818 Gene3D G3DSA:1.20.120.160 419 513 4.4E-14 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS18895 9dcf808a13a217ccaf9cb6e566a81c07 818 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 161 5.7E-15 T 09-03-2017 IPR024478 4HB MCP domain NA29_RS18895 9dcf808a13a217ccaf9cb6e566a81c07 818 SUPERFAMILY SSF55874 619 746 2.23E-24 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS18895 9dcf808a13a217ccaf9cb6e566a81c07 818 Gene3D G3DSA:3.30.565.10 623 756 1.6E-22 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS18895 9dcf808a13a217ccaf9cb6e566a81c07 818 SUPERFAMILY SSF158472 207 257 5.1E-7 T 09-03-2017 NA29_RS18895 9dcf808a13a217ccaf9cb6e566a81c07 818 Gene3D G3DSA:3.30.450.20 260 392 1.7E-5 T 09-03-2017 NA29_RS18895 9dcf808a13a217ccaf9cb6e566a81c07 818 SUPERFAMILY SSF47226 419 516 1.11E-12 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS18895 9dcf808a13a217ccaf9cb6e566a81c07 818 Pfam PF00672 HAMP domain 188 256 8.7E-12 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS18895 9dcf808a13a217ccaf9cb6e566a81c07 818 SMART SM00304 207 260 7.0E-8 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS18895 9dcf808a13a217ccaf9cb6e566a81c07 818 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 627 757 9.2E-9 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS18895 9dcf808a13a217ccaf9cb6e566a81c07 818 SMART SM00387 622 769 1.4E-14 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS18895 9dcf808a13a217ccaf9cb6e566a81c07 818 Pfam PF01627 Hpt domain 438 509 1.8E-6 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS08015 9baa92b4af0c424731d8e93717220a6a 338 Gene3D G3DSA:3.40.190.10 117 200 3.2E-22 T 09-03-2017 NA29_RS08015 9baa92b4af0c424731d8e93717220a6a 338 Gene3D G3DSA:1.10.10.10 32 112 2.5E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08015 9baa92b4af0c424731d8e93717220a6a 338 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 33 86 1.0E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08015 9baa92b4af0c424731d8e93717220a6a 338 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.3E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08015 9baa92b4af0c424731d8e93717220a6a 338 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 64 75 7.3E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08015 9baa92b4af0c424731d8e93717220a6a 338 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 54 64 7.3E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08015 9baa92b4af0c424731d8e93717220a6a 338 SUPERFAMILY SSF46785 31 112 3.96E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08015 9baa92b4af0c424731d8e93717220a6a 338 Pfam PF03466 LysR substrate binding domain 113 317 9.6E-38 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS08015 9baa92b4af0c424731d8e93717220a6a 338 SUPERFAMILY SSF53850 114 321 4.34E-41 T 09-03-2017 NA29_RS08015 9baa92b4af0c424731d8e93717220a6a 338 Gene3D G3DSA:3.40.190.10 201 286 1.4E-19 T 09-03-2017 NA29_RS08355 cc1bcb97194a37b836e9148529e9913c 342 Gene3D G3DSA:3.10.28.20 258 336 3.1E-33 T 09-03-2017 NA29_RS08355 cc1bcb97194a37b836e9148529e9913c 342 SUPERFAMILY SSF141130 163 335 3.79E-88 T 09-03-2017 NA29_RS08355 cc1bcb97194a37b836e9148529e9913c 342 SUPERFAMILY SSF141130 5 132 3.79E-88 T 09-03-2017 NA29_RS08355 cc1bcb97194a37b836e9148529e9913c 342 Pfam PF03069 Acetamidase/Formamidase family 187 332 4.4E-20 T 09-03-2017 IPR004304 Acetamidase/Formamidase GO:0016811 NA29_RS08355 cc1bcb97194a37b836e9148529e9913c 342 Pfam PF03069 Acetamidase/Formamidase family 69 183 3.6E-9 T 09-03-2017 IPR004304 Acetamidase/Formamidase GO:0016811 NA29_RS08355 cc1bcb97194a37b836e9148529e9913c 342 Gene3D G3DSA:2.60.120.580 3 95 4.0E-59 T 09-03-2017 NA29_RS08355 cc1bcb97194a37b836e9148529e9913c 342 Gene3D G3DSA:2.60.120.580 169 255 4.0E-59 T 09-03-2017 NA29_RS03725 d401a0650219f999c56a0843ccb6026d 155 SUPERFAMILY SSF54909 66 155 1.22E-20 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS03725 d401a0650219f999c56a0843ccb6026d 155 SUPERFAMILY SSF46785 6 66 8.0E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03725 d401a0650219f999c56a0843ccb6026d 155 Gene3D G3DSA:1.10.10.10 2 55 1.0E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03725 d401a0650219f999c56a0843ccb6026d 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 2.0E-14 T 09-03-2017 NA29_RS03725 d401a0650219f999c56a0843ccb6026d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 8.9E-12 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS03725 d401a0650219f999c56a0843ccb6026d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 8.9E-12 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS03725 d401a0650219f999c56a0843ccb6026d 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 8.9E-12 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS03725 d401a0650219f999c56a0843ccb6026d 155 Gene3D G3DSA:3.30.70.920 58 155 2.7E-26 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS03725 d401a0650219f999c56a0843ccb6026d 155 SMART SM00344 6 115 2.3E-33 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NA29_RS03725 d401a0650219f999c56a0843ccb6026d 155 Pfam PF01037 Lrp/AsnC ligand binding domain 72 145 5.4E-22 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS18535 ff843309e8e176c23649ed5b312c9ebe 185 Gene3D G3DSA:1.20.1260.10 38 183 2.4E-50 T 09-03-2017 IPR012347 Ferritin-related NA29_RS18535 ff843309e8e176c23649ed5b312c9ebe 185 PIRSF PIRSF018063 21 185 4.5E-58 T 09-03-2017 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold NA29_RS18535 ff843309e8e176c23649ed5b312c9ebe 185 Pfam PF00210 Ferritin-like domain 48 184 3.1E-30 T 09-03-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 NA29_RS18535 ff843309e8e176c23649ed5b312c9ebe 185 SUPERFAMILY SSF47240 40 183 2.84E-39 T 09-03-2017 IPR009078 Ferritin-like superfamily NA29_RS19535 965cf365ef699e6b2c2f0b69fd0f9bec 250 SUPERFAMILY SSF53448 4 150 1.2E-24 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS19535 965cf365ef699e6b2c2f0b69fd0f9bec 250 Gene3D G3DSA:3.90.550.10 6 101 6.1E-14 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS19535 965cf365ef699e6b2c2f0b69fd0f9bec 250 Pfam PF00535 Glycosyl transferase family 2 8 103 4.6E-15 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 NA29_RS20125 8bbca6bc9f371be493ad56cae48b0477 517 PRINTS PR01806 Virulence factor MviN signature 33 52 1.1E-77 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ NA29_RS20125 8bbca6bc9f371be493ad56cae48b0477 517 PRINTS PR01806 Virulence factor MviN signature 133 157 1.1E-77 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ NA29_RS20125 8bbca6bc9f371be493ad56cae48b0477 517 PRINTS PR01806 Virulence factor MviN signature 361 380 1.1E-77 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ NA29_RS20125 8bbca6bc9f371be493ad56cae48b0477 517 PRINTS PR01806 Virulence factor MviN signature 263 289 1.1E-77 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ NA29_RS20125 8bbca6bc9f371be493ad56cae48b0477 517 PRINTS PR01806 Virulence factor MviN signature 52 68 1.1E-77 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ NA29_RS20125 8bbca6bc9f371be493ad56cae48b0477 517 PRINTS PR01806 Virulence factor MviN signature 157 178 1.1E-77 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ NA29_RS20125 8bbca6bc9f371be493ad56cae48b0477 517 PRINTS PR01806 Virulence factor MviN signature 413 430 1.1E-77 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ NA29_RS20125 8bbca6bc9f371be493ad56cae48b0477 517 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 508 2.1E-139 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ NA29_RS20125 8bbca6bc9f371be493ad56cae48b0477 517 Pfam PF03023 MviN-like protein 28 473 4.4E-135 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ NA29_RS20125 8bbca6bc9f371be493ad56cae48b0477 517 PIRSF PIRSF002869 1 517 4.7E-150 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ NA29_RS12005 60b680a99ec50d98736f578ae49f6f20 280 Gene3D G3DSA:3.40.50.620 1 125 1.8E-7 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS12005 60b680a99ec50d98736f578ae49f6f20 280 PRINTS PR01438 Universal stress protein signature 240 252 3.4E-10 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS12005 60b680a99ec50d98736f578ae49f6f20 280 PRINTS PR01438 Universal stress protein signature 258 280 3.4E-10 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS12005 60b680a99ec50d98736f578ae49f6f20 280 PRINTS PR01438 Universal stress protein signature 154 172 3.4E-10 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS12005 60b680a99ec50d98736f578ae49f6f20 280 Gene3D G3DSA:3.40.50.620 139 280 3.9E-19 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS12005 60b680a99ec50d98736f578ae49f6f20 280 Pfam PF00582 Universal stress protein family 154 278 8.6E-10 T 09-03-2017 IPR006016 UspA GO:0006950 NA29_RS12005 60b680a99ec50d98736f578ae49f6f20 280 SUPERFAMILY SSF52402 153 279 4.19E-21 T 09-03-2017 NA29_RS12005 60b680a99ec50d98736f578ae49f6f20 280 SUPERFAMILY SSF52402 1 145 2.09E-11 T 09-03-2017 NA29_RS11530 341ee8b6c5d2d4180271a68e2c37f088 330 Gene3D G3DSA:3.40.190.10 92 176 7.0E-19 T 09-03-2017 NA29_RS11530 341ee8b6c5d2d4180271a68e2c37f088 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.7E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11530 341ee8b6c5d2d4180271a68e2c37f088 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.7E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11530 341ee8b6c5d2d4180271a68e2c37f088 330 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.7E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11530 341ee8b6c5d2d4180271a68e2c37f088 330 SUPERFAMILY SSF53850 90 309 8.32E-34 T 09-03-2017 NA29_RS11530 341ee8b6c5d2d4180271a68e2c37f088 330 Gene3D G3DSA:3.40.190.10 177 275 2.0E-19 T 09-03-2017 NA29_RS11530 341ee8b6c5d2d4180271a68e2c37f088 330 Pfam PF03466 LysR substrate binding domain 89 307 2.8E-32 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS11530 341ee8b6c5d2d4180271a68e2c37f088 330 SUPERFAMILY SSF46785 2 112 4.36E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11530 341ee8b6c5d2d4180271a68e2c37f088 330 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.7E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11530 341ee8b6c5d2d4180271a68e2c37f088 330 Gene3D G3DSA:1.10.10.10 1 85 3.0E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12245 0aa0799e23fe3a862cc600b1121dc23e 403 Pfam PF02353 Mycolic acid cyclopropane synthetase 130 397 3.2E-85 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS12245 0aa0799e23fe3a862cc600b1121dc23e 403 PIRSF PIRSF003085 15 403 1.1E-124 T 09-03-2017 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 NA29_RS12245 0aa0799e23fe3a862cc600b1121dc23e 403 SUPERFAMILY SSF53335 136 401 7.21E-73 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS12245 0aa0799e23fe3a862cc600b1121dc23e 403 Gene3D G3DSA:3.40.50.150 124 401 1.3E-92 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS10930 4607565cca53da82626f0b19f8941977 296 SUPERFAMILY SSF46689 194 243 2.78E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS10930 4607565cca53da82626f0b19f8941977 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 275 2.8E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS10930 4607565cca53da82626f0b19f8941977 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 291 2.8E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS10930 4607565cca53da82626f0b19f8941977 296 SUPERFAMILY SSF46689 245 290 7.17E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS10930 4607565cca53da82626f0b19f8941977 296 Gene3D G3DSA:1.10.10.60 193 245 1.8E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS10930 4607565cca53da82626f0b19f8941977 296 SUPERFAMILY SSF51215 13 169 1.7E-18 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS10930 4607565cca53da82626f0b19f8941977 296 SMART SM00342 209 291 7.3E-25 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS10930 4607565cca53da82626f0b19f8941977 296 Pfam PF02311 AraC-like ligand binding domain 32 170 2.1E-22 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS10930 4607565cca53da82626f0b19f8941977 296 Pfam PF12833 Helix-turn-helix domain 215 290 2.8E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS10930 4607565cca53da82626f0b19f8941977 296 Gene3D G3DSA:1.10.10.60 246 290 8.3E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS10930 4607565cca53da82626f0b19f8941977 296 Gene3D G3DSA:2.60.120.280 37 109 6.0E-13 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS19760 7ef30baea2339c4f7f44ee18452db60c 306 Gene3D G3DSA:3.40.190.10 177 261 2.0E-21 T 09-03-2017 NA29_RS19760 7ef30baea2339c4f7f44ee18452db60c 306 SUPERFAMILY SSF53850 90 296 5.79E-44 T 09-03-2017 NA29_RS19760 7ef30baea2339c4f7f44ee18452db60c 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.6E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19760 7ef30baea2339c4f7f44ee18452db60c 306 SUPERFAMILY SSF46785 5 86 1.02E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19760 7ef30baea2339c4f7f44ee18452db60c 306 Gene3D G3DSA:1.10.10.10 4 86 1.2E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19760 7ef30baea2339c4f7f44ee18452db60c 306 Pfam PF03466 LysR substrate binding domain 88 292 2.7E-44 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS19760 7ef30baea2339c4f7f44ee18452db60c 306 Gene3D G3DSA:3.40.190.10 92 176 3.0E-24 T 09-03-2017 NA29_RS13325 fc8a1d6cc0f786225fc4976d655be4f0 475 Gene3D G3DSA:3.30.870.10 106 308 1.0E-48 T 09-03-2017 NA29_RS13325 fc8a1d6cc0f786225fc4976d655be4f0 475 Pfam PF13091 PLD-like domain 316 435 1.3E-27 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 NA29_RS13325 fc8a1d6cc0f786225fc4976d655be4f0 475 Pfam PF13091 PLD-like domain 130 256 1.6E-11 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 NA29_RS13325 fc8a1d6cc0f786225fc4976d655be4f0 475 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 20 475 8.7E-111 T 09-03-2017 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 NA29_RS13325 fc8a1d6cc0f786225fc4976d655be4f0 475 Gene3D G3DSA:3.30.870.10 315 447 7.1E-35 T 09-03-2017 NA29_RS13325 fc8a1d6cc0f786225fc4976d655be4f0 475 SMART SM00155 214 241 8.3E-5 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 NA29_RS13325 fc8a1d6cc0f786225fc4976d655be4f0 475 SMART SM00155 388 415 9.9E-5 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 NA29_RS13325 fc8a1d6cc0f786225fc4976d655be4f0 475 Hamap MF_00190 Cardiolipin synthase A [clsA]. 1 475 45.407 T 09-03-2017 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 NA29_RS13325 fc8a1d6cc0f786225fc4976d655be4f0 475 SUPERFAMILY SSF56024 96 304 3.81E-52 T 09-03-2017 NA29_RS13325 fc8a1d6cc0f786225fc4976d655be4f0 475 SUPERFAMILY SSF56024 291 461 2.13E-44 T 09-03-2017 NA29_RS13325 fc8a1d6cc0f786225fc4976d655be4f0 475 Pfam PF13396 Phospholipase_D-nuclease N-terminal 18 59 5.1E-5 T 09-03-2017 IPR027379 Cardiolipin synthase N-terminal NA29_RS03275 e917689fe4456af02da4fa3743d6e565 101 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 60 1.0E-17 T 09-03-2017 IPR007337 RelB antitoxin/Antitoxin DinJ NA29_RS03275 e917689fe4456af02da4fa3743d6e565 101 Pfam PF04221 RelB antitoxin 5 52 9.5E-17 T 09-03-2017 IPR007337 RelB antitoxin/Antitoxin DinJ NA29_RS12045 e0da6581e39e903aa676c8576eec5e5f 217 SMART SM00749 83 146 0.51 T 09-03-2017 IPR014004 Transport-associated and nodulation domain, bacteria NA29_RS12045 e0da6581e39e903aa676c8576eec5e5f 217 SMART SM00749 8 71 33.0 T 09-03-2017 IPR014004 Transport-associated and nodulation domain, bacteria NA29_RS12045 e0da6581e39e903aa676c8576eec5e5f 217 Pfam PF04972 BON domain 4 71 1.8E-13 T 09-03-2017 IPR007055 BON domain NA29_RS12045 e0da6581e39e903aa676c8576eec5e5f 217 Pfam PF04972 BON domain 78 145 2.7E-16 T 09-03-2017 IPR007055 BON domain NA29_RS12045 e0da6581e39e903aa676c8576eec5e5f 217 Pfam PF04972 BON domain 152 216 6.0E-10 T 09-03-2017 IPR007055 BON domain NA29_RS02805 1422eaf85aa9beaa6881a081c648ff01 268 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 22 267 6.5E-91 T 09-03-2017 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 NA29_RS02805 1422eaf85aa9beaa6881a081c648ff01 268 SUPERFAMILY SSF161098 72 259 2.49E-33 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS02805 1422eaf85aa9beaa6881a081c648ff01 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 266 2.3E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS02805 1422eaf85aa9beaa6881a081c648ff01 268 Gene3D G3DSA:1.10.3720.10 73 265 8.6E-26 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS10375 c37f6b6fbd80c4beb3bc76f57987f0e9 219 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 19 179 2.0E-20 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain NA29_RS10375 c37f6b6fbd80c4beb3bc76f57987f0e9 219 Gene3D G3DSA:3.40.50.1110 15 195 6.6E-49 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain NA29_RS10375 c37f6b6fbd80c4beb3bc76f57987f0e9 219 SUPERFAMILY SSF52266 15 194 1.13E-45 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain NA29_RS21710 2e84bea1edb8366592117a14702d37fd 181 Hamap MF_01114 Regulatory protein RecX [recX]. 18 178 13.037 T 09-03-2017 IPR003783 Regulatory protein RecX GO:0006282 NA29_RS21710 2e84bea1edb8366592117a14702d37fd 181 Gene3D G3DSA:1.10.10.10 33 81 3.3E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21710 2e84bea1edb8366592117a14702d37fd 181 Gene3D G3DSA:1.10.10.10 82 120 5.3E-7 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21710 2e84bea1edb8366592117a14702d37fd 181 Pfam PF02631 RecX family 64 172 8.7E-26 T 09-03-2017 IPR003783 Regulatory protein RecX GO:0006282 NA29_RS21710 2e84bea1edb8366592117a14702d37fd 181 Gene3D G3DSA:1.10.10.10 129 175 7.7E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 SUPERFAMILY SSF52374 4 301 1.53E-107 T 09-03-2017 NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 SUPERFAMILY SSF48163 304 461 1.83E-42 T 09-03-2017 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 Gene3D G3DSA:1.10.10.350 368 462 5.6E-25 T 09-03-2017 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 462 2.1E-165 T 09-03-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 4.0E-24 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 PRINTS PR00987 Glutamyl-tRNA synthetase signature 200 208 4.0E-24 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 4.0E-24 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 194 4.0E-24 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 4.0E-24 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 Gene3D G3DSA:3.40.50.620 3 68 8.2E-49 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 Gene3D G3DSA:3.40.50.620 186 235 8.2E-49 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 4 463 31.899 T 09-03-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 Gene3D G3DSA:1.10.1160.10 237 319 1.7E-33 T 09-03-2017 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 Gene3D G3DSA:1.10.8.70 322 363 1.9E-4 T 09-03-2017 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 Gene3D G3DSA:3.90.800.10 69 185 6.0E-35 T 09-03-2017 NA29_RS14685 66cbae41fea4ac5a2fa0193d20094e52 463 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 310 3.2E-96 T 09-03-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 NA29_RS07060 f10dd59809fcdb54d0dd2c05c69e0a23 288 Gene3D G3DSA:3.40.50.150 106 239 1.2E-10 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS07060 f10dd59809fcdb54d0dd2c05c69e0a23 288 Pfam PF08241 Methyltransferase domain 103 153 7.7E-8 T 09-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NA29_RS07060 f10dd59809fcdb54d0dd2c05c69e0a23 288 SUPERFAMILY SSF53335 103 245 2.58E-14 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS15765 8ccd1293378bf2e4383cc43760aaa614 377 PIRSF PIRSF000183 1 371 9.4E-150 T 09-03-2017 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 NA29_RS15765 8ccd1293378bf2e4383cc43760aaa614 377 Gene3D G3DSA:3.40.50.1770 1 171 1.9E-57 T 09-03-2017 NA29_RS15765 8ccd1293378bf2e4383cc43760aaa614 377 SMART SM01002 149 297 4.1E-84 T 09-03-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain NA29_RS15765 8ccd1293378bf2e4383cc43760aaa614 377 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 7.0E-45 T 09-03-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal NA29_RS15765 8ccd1293378bf2e4383cc43760aaa614 377 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 09-03-2017 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 NA29_RS15765 8ccd1293378bf2e4383cc43760aaa614 377 Gene3D G3DSA:3.50.50.60 172 205 8.8E-7 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS15765 8ccd1293378bf2e4383cc43760aaa614 377 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 1.5E-78 T 09-03-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain NA29_RS15765 8ccd1293378bf2e4383cc43760aaa614 377 SUPERFAMILY SSF52283 305 360 1.02E-65 T 09-03-2017 NA29_RS15765 8ccd1293378bf2e4383cc43760aaa614 377 SUPERFAMILY SSF52283 1 137 1.02E-65 T 09-03-2017 NA29_RS15765 8ccd1293378bf2e4383cc43760aaa614 377 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 3.2E-150 T 09-03-2017 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 NA29_RS15765 8ccd1293378bf2e4383cc43760aaa614 377 SMART SM01003 4 137 1.1E-74 T 09-03-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal NA29_RS15765 8ccd1293378bf2e4383cc43760aaa614 377 Gene3D G3DSA:3.40.50.1770 206 359 4.6E-30 T 09-03-2017 NA29_RS15765 8ccd1293378bf2e4383cc43760aaa614 377 SUPERFAMILY SSF51735 137 303 1.44E-47 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS07125 76cfdb8cccf60b5d1fdb440658f9f2f9 104 Pfam PF16826 Domain of unknown function (DUF5076) 5 91 2.0E-22 T 09-03-2017 IPR031796 Protein of unknown function DUF5076 NA29_RS02900 f36e49239ca44d63b94834b2d8acbc47 29 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1 29 3.6E-6 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 188 333 1.1E-24 T 09-03-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 SUPERFAMILY SSF53671 35 337 1.31E-95 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 36 336 3.2E-91 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 82 101 2.3E-19 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 301 324 2.3E-19 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 168 179 2.3E-19 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 289 298 2.3E-19 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 82 89 - T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 36 180 5.9E-35 T 09-03-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 252 261 5.2E-30 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 293 298 5.2E-30 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 72 94 5.2E-30 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 167 184 5.2E-30 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 110 119 5.2E-30 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 317 331 5.2E-30 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 Gene3D G3DSA:3.40.50.1370 36 179 2.6E-49 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 Gene3D G3DSA:3.40.50.1370 180 315 4.4E-51 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS21650 aa6b1988d0d3609d25c5a974b584472b 343 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 35 338 41.023 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 NA29_RS05095 6a7f65481afe1d66ba9f632164d0c38f 390 SUPERFAMILY SSF52540 2 118 4.35E-24 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05095 6a7f65481afe1d66ba9f632164d0c38f 390 SUPERFAMILY SSF52540 260 351 4.35E-24 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05095 6a7f65481afe1d66ba9f632164d0c38f 390 Pfam PF13175 AAA ATPase domain 1 48 7.0E-9 T 09-03-2017 NA29_RS05095 6a7f65481afe1d66ba9f632164d0c38f 390 PIRSF PIRSF029347 1 388 2.0E-140 T 09-03-2017 IPR014555 RecF-like NA29_RS05095 6a7f65481afe1d66ba9f632164d0c38f 390 Gene3D G3DSA:3.40.50.300 1 77 5.9E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05095 6a7f65481afe1d66ba9f632164d0c38f 390 Gene3D G3DSA:3.40.50.300 176 353 5.9E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05095 6a7f65481afe1d66ba9f632164d0c38f 390 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 164 348 2.3E-21 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 NA29_RS12900 43698a5d6a602cb9d23d5ae059c78fee 519 SMART SM00382 35 228 1.3E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS12900 43698a5d6a602cb9d23d5ae059c78fee 519 Pfam PF00005 ABC transporter 27 172 1.3E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS12900 43698a5d6a602cb9d23d5ae059c78fee 519 Pfam PF00005 ABC transporter 276 435 4.9E-9 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS12900 43698a5d6a602cb9d23d5ae059c78fee 519 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS12900 43698a5d6a602cb9d23d5ae059c78fee 519 SUPERFAMILY SSF52540 258 493 1.78E-34 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS12900 43698a5d6a602cb9d23d5ae059c78fee 519 Gene3D G3DSA:3.40.50.300 255 498 7.3E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS12900 43698a5d6a602cb9d23d5ae059c78fee 519 Gene3D G3DSA:3.40.50.300 6 233 2.0E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS12900 43698a5d6a602cb9d23d5ae059c78fee 519 ProSitePatterns PS00211 ABC transporters family signature. 408 422 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS12900 43698a5d6a602cb9d23d5ae059c78fee 519 SUPERFAMILY SSF52540 9 224 5.89E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS12990 a2875b3ec7ba50a41080b89d2e308732 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 4.7E-6 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS12990 a2875b3ec7ba50a41080b89d2e308732 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 332 347 4.7E-6 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS12990 a2875b3ec7ba50a41080b89d2e308732 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 4.7E-6 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS12990 a2875b3ec7ba50a41080b89d2e308732 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 51 67 4.7E-6 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS12990 a2875b3ec7ba50a41080b89d2e308732 369 SUPERFAMILY SSF53822 27 363 1.85E-74 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS12990 a2875b3ec7ba50a41080b89d2e308732 369 Gene3D G3DSA:3.40.50.2300 155 234 3.5E-10 T 09-03-2017 NA29_RS12990 a2875b3ec7ba50a41080b89d2e308732 369 Pfam PF13458 Periplasmic binding protein 28 358 9.3E-54 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS12990 a2875b3ec7ba50a41080b89d2e308732 369 Gene3D G3DSA:3.40.50.2300 24 151 5.2E-49 T 09-03-2017 NA29_RS12990 a2875b3ec7ba50a41080b89d2e308732 369 Gene3D G3DSA:3.40.50.2300 284 352 5.2E-49 T 09-03-2017 NA29_RS23950 1a7267f790335c85d33bdbf79407a295 310 Gene3D G3DSA:3.40.190.10 181 265 1.3E-8 T 09-03-2017 NA29_RS23950 1a7267f790335c85d33bdbf79407a295 310 Gene3D G3DSA:1.10.10.10 7 90 3.8E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS23950 1a7267f790335c85d33bdbf79407a295 310 Gene3D G3DSA:3.40.190.10 95 180 1.0E-13 T 09-03-2017 NA29_RS23950 1a7267f790335c85d33bdbf79407a295 310 SUPERFAMILY SSF46785 5 116 2.29E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS23950 1a7267f790335c85d33bdbf79407a295 310 SUPERFAMILY SSF53850 95 300 2.58E-31 T 09-03-2017 NA29_RS23950 1a7267f790335c85d33bdbf79407a295 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 5.3E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS23950 1a7267f790335c85d33bdbf79407a295 310 Pfam PF03466 LysR substrate binding domain 93 297 5.0E-31 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS23485 973f7759ce2647ccc73b978f3bff3080 354 SUPERFAMILY SSF53383 10 352 7.56E-72 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS23485 973f7759ce2647ccc73b978f3bff3080 354 Pfam PF00155 Aminotransferase class I and II 26 348 1.2E-47 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS23485 973f7759ce2647ccc73b978f3bff3080 354 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 351 1.2E-96 T 09-03-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 NA29_RS23485 973f7759ce2647ccc73b978f3bff3080 354 Gene3D G3DSA:3.90.1150.10 255 352 2.1E-23 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS23485 973f7759ce2647ccc73b978f3bff3080 354 Gene3D G3DSA:3.40.640.10 38 254 2.6E-61 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS23485 973f7759ce2647ccc73b978f3bff3080 354 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 354 54.751 T 09-03-2017 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 NA29_RS24960 26834556d0ee2c1707f21e0f2a51ef45 294 Gene3D G3DSA:3.40.50.300 20 252 1.7E-24 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24960 26834556d0ee2c1707f21e0f2a51ef45 294 SUPERFAMILY SSF52540 21 252 3.44E-24 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10625 ee54c752f6f5ac1ffdd283b986426759 161 PIRSF PIRSF005900 1 161 1.9E-37 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NA29_RS10625 ee54c752f6f5ac1ffdd283b986426759 161 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 6.3E-9 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NA29_RS10625 ee54c752f6f5ac1ffdd283b986426759 161 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 136 154 6.3E-9 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NA29_RS10625 ee54c752f6f5ac1ffdd283b986426759 161 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 6.3E-9 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 NA29_RS10625 ee54c752f6f5ac1ffdd283b986426759 161 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 09-03-2017 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 NA29_RS10625 ee54c752f6f5ac1ffdd283b986426759 161 SUPERFAMILY SSF47240 5 158 1.34E-38 T 09-03-2017 IPR009078 Ferritin-like superfamily NA29_RS10625 ee54c752f6f5ac1ffdd283b986426759 161 Gene3D G3DSA:1.20.1260.10 3 159 2.0E-41 T 09-03-2017 IPR012347 Ferritin-related NA29_RS10625 ee54c752f6f5ac1ffdd283b986426759 161 Pfam PF00210 Ferritin-like domain 20 159 3.0E-21 T 09-03-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 NA29_RS16595 2c63740d3ff6389bac504caf1ed44537 295 Pfam PF13493 Domain of unknown function (DUF4118) 2 99 7.2E-15 T 09-03-2017 IPR025201 Sensor protein KdpD, transmembrane domain NA29_RS16595 2c63740d3ff6389bac504caf1ed44537 295 Gene3D G3DSA:3.30.450.20 137 228 2.6E-6 T 09-03-2017 NA29_RS16595 2c63740d3ff6389bac504caf1ed44537 295 SUPERFAMILY SSF55785 140 228 2.97E-6 T 09-03-2017 IPR000014 PAS domain NA29_RS16595 2c63740d3ff6389bac504caf1ed44537 295 Gene3D G3DSA:1.20.120.620 2 94 2.8E-12 T 09-03-2017 NA29_RS04120 6c7a35e6a7fd76f25a3ada592535b302 197 Pfam PF02525 Flavodoxin-like fold 1 189 3.6E-36 T 09-03-2017 IPR003680 Flavodoxin-like fold NA29_RS04120 6c7a35e6a7fd76f25a3ada592535b302 197 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 195 23.558 T 09-03-2017 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 NA29_RS04120 6c7a35e6a7fd76f25a3ada592535b302 197 Gene3D G3DSA:3.40.50.360 1 186 1.4E-47 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS04120 6c7a35e6a7fd76f25a3ada592535b302 197 SUPERFAMILY SSF52218 1 186 2.16E-37 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS19715 77ff12e93162b6c3c954cbbbe2a366e6 281 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 264 4.6E-61 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS19715 77ff12e93162b6c3c954cbbbe2a366e6 281 SMART SM00062 45 266 9.3E-67 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS19715 77ff12e93162b6c3c954cbbbe2a366e6 281 SUPERFAMILY SSF53850 18 265 2.34E-69 T 09-03-2017 NA29_RS19715 77ff12e93162b6c3c954cbbbe2a366e6 281 Gene3D G3DSA:3.40.190.10 225 265 1.3E-40 T 09-03-2017 NA29_RS19715 77ff12e93162b6c3c954cbbbe2a366e6 281 Gene3D G3DSA:3.40.190.10 42 123 1.3E-40 T 09-03-2017 NA29_RS19715 77ff12e93162b6c3c954cbbbe2a366e6 281 Gene3D G3DSA:3.40.190.10 124 214 1.2E-17 T 09-03-2017 NA29_RS03890 8fe39f58598fc3c7b09fb932755c2348 346 Pfam PF01515 Phosphate acetyl/butaryl transferase 4 325 6.1E-115 T 09-03-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 NA29_RS03890 8fe39f58598fc3c7b09fb932755c2348 346 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 325 8.4E-109 T 09-03-2017 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 NA29_RS03890 8fe39f58598fc3c7b09fb932755c2348 346 Gene3D G3DSA:3.40.50.10750 137 302 1.6E-59 T 09-03-2017 NA29_RS03890 8fe39f58598fc3c7b09fb932755c2348 346 SUPERFAMILY SSF53659 1 329 1.56E-88 T 09-03-2017 NA29_RS03890 8fe39f58598fc3c7b09fb932755c2348 346 PIRSF PIRSF000428 1 333 4.8E-105 T 09-03-2017 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 NA29_RS11600 3d04d077304a8fe8febd1ad91e845686 205 SUPERFAMILY SSF55469 19 198 1.44E-37 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 NA29_RS11600 3d04d077304a8fe8febd1ad91e845686 205 PIRSF PIRSF000232 13 202 1.2E-62 T 09-03-2017 IPR026021 Putative NAD(P)H nitroreductase YdjA-like NA29_RS11600 3d04d077304a8fe8febd1ad91e845686 205 Pfam PF00881 Nitroreductase family 24 178 1.4E-25 T 09-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 NA29_RS11600 3d04d077304a8fe8febd1ad91e845686 205 Gene3D G3DSA:3.40.109.10 18 199 1.6E-39 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 NA29_RS18510 52ad3def922394a01bb02dc8eef9cd82 270 SUPERFAMILY SSF53850 35 270 1.09E-93 T 09-03-2017 NA29_RS18510 52ad3def922394a01bb02dc8eef9cd82 270 Pfam PF03180 NLPA lipoprotein 35 270 7.3E-98 T 09-03-2017 IPR004872 Lipoprotein NlpA family NA29_RS18510 52ad3def922394a01bb02dc8eef9cd82 270 PIRSF PIRSF002854 1 270 1.9E-107 T 09-03-2017 IPR004872 Lipoprotein NlpA family NA29_RS18510 52ad3def922394a01bb02dc8eef9cd82 270 Gene3D G3DSA:3.40.190.10 35 162 8.3E-58 T 09-03-2017 NA29_RS18510 52ad3def922394a01bb02dc8eef9cd82 270 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 30 270 4.3E-83 T 09-03-2017 IPR004872 Lipoprotein NlpA family NA29_RS12235 023b9ca10598f181801316efa451280e 433 SUPERFAMILY SSF51905 393 422 5.61E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS12235 023b9ca10598f181801316efa451280e 433 SUPERFAMILY SSF51905 12 309 5.61E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS12235 023b9ca10598f181801316efa451280e 433 Pfam PF01593 Flavin containing amine oxidoreductase 20 275 2.6E-20 T 09-03-2017 IPR002937 Amine oxidase GO:0016491|GO:0055114 NA29_RS12235 023b9ca10598f181801316efa451280e 433 Gene3D G3DSA:3.50.50.60 178 303 2.1E-30 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS12235 023b9ca10598f181801316efa451280e 433 Gene3D G3DSA:3.50.50.60 12 103 2.1E-30 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS18415 fbaa85ec7c292cbcf190c3a56fa26077 276 SUPERFAMILY SSF56529 12 268 1.15E-80 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS18415 fbaa85ec7c292cbcf190c3a56fa26077 276 Gene3D G3DSA:3.90.850.10 11 268 1.5E-88 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS18415 fbaa85ec7c292cbcf190c3a56fa26077 276 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 98 267 4.6E-13 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS19650 02d06320ef946563dca3216ec16bdc44 432 Gene3D G3DSA:2.40.50.100 206 239 4.8E-21 T 09-03-2017 NA29_RS19650 02d06320ef946563dca3216ec16bdc44 432 Gene3D G3DSA:2.40.50.100 98 131 4.8E-21 T 09-03-2017 NA29_RS19650 02d06320ef946563dca3216ec16bdc44 432 Pfam PF13437 HlyD family secretion protein 209 310 8.5E-5 T 09-03-2017 NA29_RS19650 02d06320ef946563dca3216ec16bdc44 432 Pfam PF13533 Biotin-lipoyl like 98 146 8.1E-15 T 09-03-2017 NA29_RS19650 02d06320ef946563dca3216ec16bdc44 432 SUPERFAMILY SSF111369 90 324 7.45E-53 T 09-03-2017 NA29_RS19650 02d06320ef946563dca3216ec16bdc44 432 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 73 401 1.6E-73 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NA29_RS20440 870e9e1a73481df2d13d15f594464bfa 360 Gene3D G3DSA:1.10.45.10 334 356 6.7E-7 T 09-03-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 NA29_RS20440 870e9e1a73481df2d13d15f594464bfa 360 SUPERFAMILY SSF55103 189 358 1.8E-16 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NA29_RS20440 870e9e1a73481df2d13d15f594464bfa 360 SUPERFAMILY SSF56176 7 174 6.54E-34 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS20440 870e9e1a73481df2d13d15f594464bfa 360 Pfam PF01565 FAD binding domain 6 136 8.4E-24 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NA29_RS20440 870e9e1a73481df2d13d15f594464bfa 360 Gene3D G3DSA:3.30.465.10 53 174 9.0E-21 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS24320 4dde5605e406559401e16cb1966cc911 208 Pfam PF03433 EspA-like secreted protein 52 198 3.4E-11 T 09-03-2017 IPR005095 EspA-like secreted protein NA29_RS24320 4dde5605e406559401e16cb1966cc911 208 SUPERFAMILY SSF116927 28 202 9.94E-15 T 09-03-2017 NA29_RS24370 400d378bd0313a600572041af3812f99 617 Gene3D G3DSA:1.20.210.10 25 569 2.6E-177 T 09-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24370 400d378bd0313a600572041af3812f99 617 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 33 553 1.3E-202 T 09-03-2017 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 NA29_RS24370 400d378bd0313a600572041af3812f99 617 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 42 505 1.5E-133 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24370 400d378bd0313a600572041af3812f99 617 PRINTS PR01165 Cytochrome c oxidase subunit I signature 275 296 1.9E-73 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24370 400d378bd0313a600572041af3812f99 617 PRINTS PR01165 Cytochrome c oxidase subunit I signature 32 57 1.9E-73 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24370 400d378bd0313a600572041af3812f99 617 PRINTS PR01165 Cytochrome c oxidase subunit I signature 108 132 1.9E-73 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24370 400d378bd0313a600572041af3812f99 617 PRINTS PR01165 Cytochrome c oxidase subunit I signature 458 479 1.9E-73 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24370 400d378bd0313a600572041af3812f99 617 PRINTS PR01165 Cytochrome c oxidase subunit I signature 80 103 1.9E-73 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24370 400d378bd0313a600572041af3812f99 617 PRINTS PR01165 Cytochrome c oxidase subunit I signature 321 336 1.9E-73 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24370 400d378bd0313a600572041af3812f99 617 PRINTS PR01165 Cytochrome c oxidase subunit I signature 345 366 1.9E-73 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24370 400d378bd0313a600572041af3812f99 617 PRINTS PR01165 Cytochrome c oxidase subunit I signature 380 398 1.9E-73 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24370 400d378bd0313a600572041af3812f99 617 PRINTS PR01165 Cytochrome c oxidase subunit I signature 408 427 1.9E-73 T 09-03-2017 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24370 400d378bd0313a600572041af3812f99 617 SUPERFAMILY SSF81442 29 551 5.49E-155 T 09-03-2017 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24370 400d378bd0313a600572041af3812f99 617 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 277 331 - T 09-03-2017 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS23730 4e6b950fdcaf6e8fd4b1096e0cd42bdf 110 Pfam PF03091 CutA1 divalent ion tolerance protein 6 102 3.3E-33 T 09-03-2017 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 NA29_RS23730 4e6b950fdcaf6e8fd4b1096e0cd42bdf 110 Gene3D G3DSA:3.30.70.830 3 106 1.2E-37 T 09-03-2017 NA29_RS23730 4e6b950fdcaf6e8fd4b1096e0cd42bdf 110 SUPERFAMILY SSF54913 2 105 2.0E-34 T 09-03-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta NA29_RS14905 484f5507dfdb07b35bc3a6d6a6381a5b 382 SMART SM00631 107 361 0.0031 T 09-03-2017 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 NA29_RS14905 484f5507dfdb07b35bc3a6d6a6381a5b 382 Gene3D G3DSA:3.40.630.10 100 349 4.3E-42 T 09-03-2017 NA29_RS14905 484f5507dfdb07b35bc3a6d6a6381a5b 382 SUPERFAMILY SSF53187 108 354 5.62E-53 T 09-03-2017 NA29_RS14905 484f5507dfdb07b35bc3a6d6a6381a5b 382 Pfam PF00246 Zinc carboxypeptidase 126 271 1.3E-20 T 09-03-2017 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 NA29_RS23910 617f629a86a01f98f8a3479f704709b3 240 Pfam PF12710 haloacid dehalogenase-like hydrolase 12 188 9.4E-10 T 09-03-2017 NA29_RS23910 617f629a86a01f98f8a3479f704709b3 240 Gene3D G3DSA:3.40.50.1000 75 224 2.5E-17 T 09-03-2017 IPR023214 HAD-like domain NA29_RS23910 617f629a86a01f98f8a3479f704709b3 240 SUPERFAMILY SSF56784 11 224 2.67E-21 T 09-03-2017 IPR023214 HAD-like domain NA29_RS16230 705d40551dfddf3267f751ccaf86fefc 685 Pfam PF01032 FecCD transport family 378 682 4.9E-67 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 NA29_RS16230 705d40551dfddf3267f751ccaf86fefc 685 Pfam PF01032 FecCD transport family 51 352 3.6E-64 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 NA29_RS16230 705d40551dfddf3267f751ccaf86fefc 685 SUPERFAMILY SSF81345 368 683 3.14E-63 T 09-03-2017 IPR029022 ABC transporter, BtuC-like NA29_RS16230 705d40551dfddf3267f751ccaf86fefc 685 Gene3D G3DSA:1.10.3470.10 21 355 7.5E-67 T 09-03-2017 IPR029022 ABC transporter, BtuC-like NA29_RS16230 705d40551dfddf3267f751ccaf86fefc 685 Gene3D G3DSA:1.10.3470.10 369 683 1.4E-69 T 09-03-2017 IPR029022 ABC transporter, BtuC-like NA29_RS16230 705d40551dfddf3267f751ccaf86fefc 685 SUPERFAMILY SSF81345 16 352 3.14E-53 T 09-03-2017 IPR029022 ABC transporter, BtuC-like NA29_RS07465 67c09751f30b02cbba72070e43f6c277 101 Gene3D G3DSA:3.40.309.10 8 79 1.9E-22 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS07465 67c09751f30b02cbba72070e43f6c277 101 SUPERFAMILY SSF53720 7 100 2.36E-30 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS07465 67c09751f30b02cbba72070e43f6c277 101 Pfam PF00171 Aldehyde dehydrogenase family 5 99 2.7E-30 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS03100 aaa57f88f0f1356cf568713f8b6687e8 234 Pfam PF00072 Response regulator receiver domain 5 114 2.7E-23 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS03100 aaa57f88f0f1356cf568713f8b6687e8 234 Gene3D G3DSA:3.40.50.2300 2 122 7.2E-38 T 09-03-2017 NA29_RS03100 aaa57f88f0f1356cf568713f8b6687e8 234 SMART SM00448 3 113 3.9E-40 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS03100 aaa57f88f0f1356cf568713f8b6687e8 234 SUPERFAMILY SSF46894 128 229 7.37E-24 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS03100 aaa57f88f0f1356cf568713f8b6687e8 234 Gene3D G3DSA:1.10.10.10 128 230 1.2E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03100 aaa57f88f0f1356cf568713f8b6687e8 234 SUPERFAMILY SSF52172 2 125 8.82E-39 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS03100 aaa57f88f0f1356cf568713f8b6687e8 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 3.3E-22 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS03100 aaa57f88f0f1356cf568713f8b6687e8 234 SMART SM00862 152 228 2.8E-19 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS00765 93aa4a8db06862196aea50be972655fe 147 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 146 1.7E-34 T 09-03-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 NA29_RS00765 93aa4a8db06862196aea50be972655fe 147 SUPERFAMILY SSF55620 2 145 7.78E-38 T 09-03-2017 NA29_RS00765 93aa4a8db06862196aea50be972655fe 147 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 117 5.3E-28 T 09-03-2017 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 NA29_RS00765 93aa4a8db06862196aea50be972655fe 147 Gene3D G3DSA:3.30.479.10 2 145 5.6E-38 T 09-03-2017 NA29_RS22655 e8d459dd22a1252b9f0bd81f29707941 221 SUPERFAMILY SSF52172 1 172 9.68E-37 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS22655 e8d459dd22a1252b9f0bd81f29707941 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.5E-18 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS22655 e8d459dd22a1252b9f0bd81f29707941 221 Gene3D G3DSA:3.40.50.2300 1 121 5.0E-35 T 09-03-2017 NA29_RS22655 e8d459dd22a1252b9f0bd81f29707941 221 Gene3D G3DSA:1.10.10.10 122 216 2.0E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS22655 e8d459dd22a1252b9f0bd81f29707941 221 Pfam PF00072 Response regulator receiver domain 3 112 2.9E-24 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS22655 e8d459dd22a1252b9f0bd81f29707941 221 SMART SM00448 1 112 1.4E-33 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS22655 e8d459dd22a1252b9f0bd81f29707941 221 SMART SM00862 145 216 4.7E-20 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS13245 6ba687390f4acf7822553d844073d979 293 Gene3D G3DSA:3.30.479.20 57 147 6.2E-21 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS13245 6ba687390f4acf7822553d844073d979 293 SUPERFAMILY SSF54713 150 287 1.53E-50 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS13245 6ba687390f4acf7822553d844073d979 293 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 287 5.4E-94 T 09-03-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS13245 6ba687390f4acf7822553d844073d979 293 Pfam PF00889 Elongation factor TS 71 270 2.6E-71 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS13245 6ba687390f4acf7822553d844073d979 293 Gene3D G3DSA:3.30.479.20 150 185 1.8E-28 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS13245 6ba687390f4acf7822553d844073d979 293 Gene3D G3DSA:3.30.479.20 234 269 1.8E-28 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS13245 6ba687390f4acf7822553d844073d979 293 Hamap MF_00050 Elongation factor Ts [tsf]. 1 287 78.068 T 09-03-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS13245 6ba687390f4acf7822553d844073d979 293 Gene3D G3DSA:1.10.8.10 3 55 2.1E-21 T 09-03-2017 NA29_RS13245 6ba687390f4acf7822553d844073d979 293 SUPERFAMILY SSF46934 4 56 2.42E-13 T 09-03-2017 IPR009060 UBA-like GO:0005515 NA29_RS13245 6ba687390f4acf7822553d844073d979 293 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 09-03-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS13245 6ba687390f4acf7822553d844073d979 293 Gene3D G3DSA:1.10.286.20 191 233 2.7E-18 T 09-03-2017 NA29_RS13245 6ba687390f4acf7822553d844073d979 293 SUPERFAMILY SSF54713 56 145 1.44E-26 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 NA29_RS02005 5972c7e2ffd54880e4188bc2c60d3187 402 SUPERFAMILY SSF53383 7 392 8.78E-105 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS02005 5972c7e2ffd54880e4188bc2c60d3187 402 Pfam PF00155 Aminotransferase class I and II 43 389 2.6E-64 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS02005 5972c7e2ffd54880e4188bc2c60d3187 402 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 6 393 47.724 T 09-03-2017 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 NA29_RS02005 5972c7e2ffd54880e4188bc2c60d3187 402 Gene3D G3DSA:3.40.640.10 60 278 2.4E-85 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS02005 5972c7e2ffd54880e4188bc2c60d3187 402 Gene3D G3DSA:3.90.1150.10 279 392 2.3E-27 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS02005 5972c7e2ffd54880e4188bc2c60d3187 402 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 389 2.0E-138 T 09-03-2017 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 NA29_RS19545 836e6f1c5d5890cb4f06a12ada23f113 1194 Pfam PF01336 OB-fold nucleic acid binding domain 992 1065 6.6E-8 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 NA29_RS19545 836e6f1c5d5890cb4f06a12ada23f113 1194 Gene3D G3DSA:1.10.150.280 839 873 6.5E-4 T 09-03-2017 NA29_RS19545 836e6f1c5d5890cb4f06a12ada23f113 1194 Gene3D G3DSA:3.20.20.140 9 268 6.4E-21 T 09-03-2017 NA29_RS19545 836e6f1c5d5890cb4f06a12ada23f113 1194 Pfam PF02811 PHP domain 11 177 1.8E-41 T 09-03-2017 IPR004013 PHP domain GO:0003824 NA29_RS19545 836e6f1c5d5890cb4f06a12ada23f113 1194 Gene3D G3DSA:2.40.50.140 975 1069 9.2E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS19545 836e6f1c5d5890cb4f06a12ada23f113 1194 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 9 1026 0.0 T 09-03-2017 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS19545 836e6f1c5d5890cb4f06a12ada23f113 1194 SMART SM00481 10 77 4.7E-25 T 09-03-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 NA29_RS19545 836e6f1c5d5890cb4f06a12ada23f113 1194 SUPERFAMILY SSF89550 9 268 1.16E-10 T 09-03-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 NA29_RS19545 836e6f1c5d5890cb4f06a12ada23f113 1194 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 297 737 2.5E-176 T 09-03-2017 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS19545 836e6f1c5d5890cb4f06a12ada23f113 1194 Pfam PF14579 Helix-hairpin-helix motif 812 901 6.8E-28 T 09-03-2017 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS23890 bfe1db10f366e688756aadaf0c7a4f3c 156 PIRSF PIRSF002122 3 156 9.9E-59 T 09-03-2017 IPR000235 Ribosomal protein S5/S7 GO:0006412 NA29_RS23890 bfe1db10f366e688756aadaf0c7a4f3c 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 09-03-2017 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23890 bfe1db10f366e688756aadaf0c7a4f3c 156 SUPERFAMILY SSF47973 2 149 1.44E-61 T 09-03-2017 IPR023798 Ribosomal protein S7 domain NA29_RS23890 bfe1db10f366e688756aadaf0c7a4f3c 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.2E-66 T 09-03-2017 IPR023798 Ribosomal protein S7 domain NA29_RS23890 bfe1db10f366e688756aadaf0c7a4f3c 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.203 T 09-03-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 NA29_RS23890 bfe1db10f366e688756aadaf0c7a4f3c 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 2.0E-65 T 09-03-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 NA29_RS23890 bfe1db10f366e688756aadaf0c7a4f3c 156 Gene3D G3DSA:1.10.455.10 7 156 4.9E-65 T 09-03-2017 IPR023798 Ribosomal protein S7 domain NA29_RS17320 37696800d1545657cfa6cd64581cb46d 338 Pfam PF04909 Amidohydrolase 3 333 3.1E-56 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS17320 37696800d1545657cfa6cd64581cb46d 338 SUPERFAMILY SSF51556 1 334 1.36E-78 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS17320 37696800d1545657cfa6cd64581cb46d 338 Gene3D G3DSA:3.20.20.140 1 335 2.4E-77 T 09-03-2017 NA29_RS02450 aa4ba4773c8e62619e8edccc17d1b08d 168 Gene3D G3DSA:3.10.420.10 3 149 4.1E-57 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NA29_RS02450 aa4ba4773c8e62619e8edccc17d1b08d 168 SUPERFAMILY SSF54611 7 147 1.22E-46 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NA29_RS02450 aa4ba4773c8e62619e8edccc17d1b08d 168 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 4 138 7.0E-45 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NA29_RS02450 aa4ba4773c8e62619e8edccc17d1b08d 168 Pfam PF02556 Preprotein translocase subunit SecB 3 141 2.7E-52 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NA29_RS02450 aa4ba4773c8e62619e8edccc17d1b08d 168 Hamap MF_00821 Protein-export protein SecB [secB]. 1 143 30.929 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NA29_RS02450 aa4ba4773c8e62619e8edccc17d1b08d 168 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 71 91 8.4E-27 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NA29_RS02450 aa4ba4773c8e62619e8edccc17d1b08d 168 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 121 139 8.4E-27 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NA29_RS02450 aa4ba4773c8e62619e8edccc17d1b08d 168 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 11 28 8.4E-27 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NA29_RS02450 aa4ba4773c8e62619e8edccc17d1b08d 168 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 95 117 8.4E-27 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 NA29_RS13905 7f37d655c3a378709f3f1824024f2b85 257 Gene3D G3DSA:1.10.3720.10 56 250 3.7E-21 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS13905 7f37d655c3a378709f3f1824024f2b85 257 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 250 5.0E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS13905 7f37d655c3a378709f3f1824024f2b85 257 SUPERFAMILY SSF161098 58 242 5.56E-28 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS19585 a0e3aa8594e04eb04b81d1491d59f186 292 SUPERFAMILY SSF56601 55 287 3.59E-38 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS19585 a0e3aa8594e04eb04b81d1491d59f186 292 Gene3D G3DSA:3.40.710.10 56 291 2.1E-77 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS19585 a0e3aa8594e04eb04b81d1491d59f186 292 Pfam PF00905 Penicillin binding protein transpeptidase domain 70 287 1.0E-27 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NA29_RS04910 2a82a583ddcdba87feca01d6391c4db0 298 SUPERFAMILY SSF51182 8 293 3.29E-90 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS04910 2a82a583ddcdba87feca01d6391c4db0 298 Pfam PF05726 Pirin C-terminal cupin domain 184 289 2.2E-32 T 09-03-2017 IPR008778 Pirin, C-terminal domain NA29_RS04910 2a82a583ddcdba87feca01d6391c4db0 298 Gene3D G3DSA:2.60.120.10 7 262 3.9E-88 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS04910 2a82a583ddcdba87feca01d6391c4db0 298 Pfam PF02678 Pirin 24 129 7.2E-35 T 09-03-2017 IPR003829 Pirin, N-terminal domain NA29_RS04910 2a82a583ddcdba87feca01d6391c4db0 298 PIRSF PIRSF006232 5 297 1.5E-101 T 09-03-2017 IPR012093 Pirin NA29_RS11165 bdfe2e1405ee2022ccf0fc8cd3c81fcc 285 SUPERFAMILY SSF46785 42 110 2.77E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11165 bdfe2e1405ee2022ccf0fc8cd3c81fcc 285 Pfam PF01614 Bacterial transcriptional regulator 157 276 1.1E-21 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS11165 bdfe2e1405ee2022ccf0fc8cd3c81fcc 285 Pfam PF09339 IclR helix-turn-helix domain 42 89 2.0E-13 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS11165 bdfe2e1405ee2022ccf0fc8cd3c81fcc 285 SMART SM00346 36 126 1.2E-20 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS11165 bdfe2e1405ee2022ccf0fc8cd3c81fcc 285 Gene3D G3DSA:1.10.10.10 42 106 8.8E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11165 bdfe2e1405ee2022ccf0fc8cd3c81fcc 285 SMART SM00418 36 108 0.0019 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS11165 bdfe2e1405ee2022ccf0fc8cd3c81fcc 285 SUPERFAMILY SSF55781 101 280 7.85E-41 T 09-03-2017 IPR029016 GAF domain-like NA29_RS11165 bdfe2e1405ee2022ccf0fc8cd3c81fcc 285 Gene3D G3DSA:3.30.450.40 107 280 8.6E-42 T 09-03-2017 IPR029016 GAF domain-like NA29_RS17495 e7b918b67cc740dac9fa866f8ac7d388 286 SMART SM00346 35 125 6.6E-18 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS17495 e7b918b67cc740dac9fa866f8ac7d388 286 Pfam PF09339 IclR helix-turn-helix domain 37 84 3.2E-11 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS17495 e7b918b67cc740dac9fa866f8ac7d388 286 SUPERFAMILY SSF46785 35 108 7.26E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17495 e7b918b67cc740dac9fa866f8ac7d388 286 Gene3D G3DSA:3.30.450.40 109 278 6.6E-48 T 09-03-2017 IPR029016 GAF domain-like NA29_RS17495 e7b918b67cc740dac9fa866f8ac7d388 286 Gene3D G3DSA:1.10.10.10 30 106 3.1E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17495 e7b918b67cc740dac9fa866f8ac7d388 286 SUPERFAMILY SSF55781 106 278 1.37E-46 T 09-03-2017 IPR029016 GAF domain-like NA29_RS17495 e7b918b67cc740dac9fa866f8ac7d388 286 Pfam PF01614 Bacterial transcriptional regulator 155 278 2.0E-29 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS16580 b4e889d8831c98f04b12374373e1fe33 434 Gene3D G3DSA:3.40.190.10 152 362 1.1E-42 T 09-03-2017 NA29_RS16580 b4e889d8831c98f04b12374373e1fe33 434 Pfam PF13416 Bacterial extracellular solute-binding protein 53 368 6.0E-43 T 09-03-2017 NA29_RS16580 b4e889d8831c98f04b12374373e1fe33 434 SUPERFAMILY SSF53850 33 426 1.83E-72 T 09-03-2017 NA29_RS07760 065b3d34c43059a39adcfa595de77647 397 Pfam PF13609 Gram-negative porin 26 359 7.2E-42 T 09-03-2017 NA29_RS07760 065b3d34c43059a39adcfa595de77647 397 SUPERFAMILY SSF56935 37 258 1.8E-61 T 09-03-2017 NA29_RS07760 065b3d34c43059a39adcfa595de77647 397 SUPERFAMILY SSF56935 290 397 1.8E-61 T 09-03-2017 NA29_RS07760 065b3d34c43059a39adcfa595de77647 397 Gene3D G3DSA:2.40.160.10 37 397 2.1E-67 T 09-03-2017 IPR023614 Porin domain NA29_RS06260 521944c409051c5c0d2f9de49b0e5064 173 Pfam PF09351 Domain of unknown function (DUF1993) 5 165 1.7E-56 T 09-03-2017 IPR018531 Domain of unknown function DUF1993 NA29_RS06260 521944c409051c5c0d2f9de49b0e5064 173 SUPERFAMILY SSF109854 4 168 3.71E-56 T 09-03-2017 NA29_RS06260 521944c409051c5c0d2f9de49b0e5064 173 Gene3D G3DSA:1.20.120.450 1 166 1.1E-62 T 09-03-2017 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 SUPERFAMILY SSF53067 188 383 2.27E-68 T 09-03-2017 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 SUPERFAMILY SSF53067 4 184 8.91E-65 T 09-03-2017 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.3E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 PRINTS PR00301 70kDa heat shock protein signature 366 386 1.3E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 PRINTS PR00301 70kDa heat shock protein signature 335 351 1.3E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.3E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 PRINTS PR00301 70kDa heat shock protein signature 138 158 1.3E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 PRINTS PR00301 70kDa heat shock protein signature 389 408 1.3E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.3E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 PRINTS PR00301 70kDa heat shock protein signature 470 486 1.3E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 PRINTS PR00301 70kDa heat shock protein signature 199 209 1.3E-79 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 Gene3D G3DSA:1.20.1270.10 533 604 4.8E-29 T 09-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 Gene3D G3DSA:3.30.420.40 119 196 1.4E-63 T 09-03-2017 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 Gene3D G3DSA:3.30.420.40 4 52 1.4E-63 T 09-03-2017 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 Gene3D G3DSA:3.30.30.30 53 106 4.7E-26 T 09-03-2017 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 Gene3D G3DSA:2.60.34.10 391 532 1.3E-70 T 09-03-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 604 4.2E-289 T 09-03-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 Pfam PF00012 Hsp70 protein 4 604 2.3E-264 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 637 36.676 T 09-03-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 Gene3D G3DSA:3.30.420.40 197 230 7.8E-34 T 09-03-2017 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 Gene3D G3DSA:3.30.420.40 320 362 7.8E-34 T 09-03-2017 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 SUPERFAMILY SSF100934 508 606 1.31E-22 T 09-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 Gene3D G3DSA:3.90.640.10 231 315 6.9E-31 T 09-03-2017 NA29_RS20345 c0c10bbbd9d87973b23b2b5434abc0f8 641 SUPERFAMILY SSF100920 385 540 1.44E-60 T 09-03-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 NA29_RS13115 b29eb2c289c21d2f5b4e5e5c9b4f4c09 588 Gene3D G3DSA:3.30.565.10 454 579 1.4E-11 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS13115 b29eb2c289c21d2f5b4e5e5c9b4f4c09 588 Gene3D G3DSA:2.60.120.260 6 112 1.2E-4 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS13115 b29eb2c289c21d2f5b4e5e5c9b4f4c09 588 SUPERFAMILY SSF49785 6 114 2.67E-10 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS13115 b29eb2c289c21d2f5b4e5e5c9b4f4c09 588 SMART SM00387 487 587 1.5E-11 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS13115 b29eb2c289c21d2f5b4e5e5c9b4f4c09 588 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 491 580 3.5E-10 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS13115 b29eb2c289c21d2f5b4e5e5c9b4f4c09 588 Pfam PF07695 7TM diverse intracellular signalling 147 340 7.6E-17 T 09-03-2017 IPR011623 7TM-DISM receptor, extracellular domain, type 1 NA29_RS13115 b29eb2c289c21d2f5b4e5e5c9b4f4c09 588 SUPERFAMILY SSF55874 463 582 8.25E-16 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS15450 200352786517161f3bfea5d39790892c 178 SMART SM00986 14 169 1.0E-9 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 NA29_RS15450 200352786517161f3bfea5d39790892c 178 SMART SM00987 14 169 1.0E-9 T 09-03-2017 NA29_RS15450 200352786517161f3bfea5d39790892c 178 Pfam PF03167 Uracil DNA glycosylase superfamily 15 162 6.0E-12 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 NA29_RS15450 200352786517161f3bfea5d39790892c 178 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 13 162 4.0E-43 T 09-03-2017 IPR026353 Hypoxanthine-DNA glycosylase NA29_RS15450 200352786517161f3bfea5d39790892c 178 Gene3D G3DSA:3.40.470.10 13 169 2.0E-32 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 NA29_RS15450 200352786517161f3bfea5d39790892c 178 SUPERFAMILY SSF52141 13 169 6.15E-38 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 NA29_RS10315 ba08828c6fce00e92dae0569227f467f 335 Gene3D G3DSA:3.10.129.10 194 276 1.8E-19 T 09-03-2017 IPR029069 HotDog domain NA29_RS10315 ba08828c6fce00e92dae0569227f467f 335 PRINTS PR01483 Fatty acid synthase signature 223 244 2.5E-5 T 09-03-2017 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 NA29_RS10315 ba08828c6fce00e92dae0569227f467f 335 PRINTS PR01483 Fatty acid synthase signature 201 223 2.5E-5 T 09-03-2017 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 NA29_RS10315 ba08828c6fce00e92dae0569227f467f 335 SUPERFAMILY SSF54637 194 307 1.01E-17 T 09-03-2017 IPR029069 HotDog domain NA29_RS10315 ba08828c6fce00e92dae0569227f467f 335 SUPERFAMILY SSF54637 60 169 2.3E-7 T 09-03-2017 IPR029069 HotDog domain NA29_RS10315 ba08828c6fce00e92dae0569227f467f 335 Pfam PF01575 MaoC like domain 202 270 8.4E-12 T 09-03-2017 IPR002539 MaoC-like domain NA29_RS17870 f47490ce7b3411508be76d4578e49c40 156 Gene3D G3DSA:3.10.590.10 4 153 1.7E-30 T 09-03-2017 IPR002740 EVE domain NA29_RS17870 f47490ce7b3411508be76d4578e49c40 156 Pfam PF01878 EVE domain 4 151 4.7E-54 T 09-03-2017 IPR002740 EVE domain NA29_RS17870 f47490ce7b3411508be76d4578e49c40 156 SUPERFAMILY SSF88697 3 152 9.11E-59 T 09-03-2017 IPR015947 PUA-like domain NA29_RS10050 50982c1ad22d9e271d274b9dafe9f8b9 182 Gene3D G3DSA:3.40.30.10 4 181 2.8E-50 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS10050 50982c1ad22d9e271d274b9dafe9f8b9 182 SUPERFAMILY SSF52833 4 181 4.77E-43 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS10050 50982c1ad22d9e271d274b9dafe9f8b9 182 Pfam PF00578 AhpC/TSA family 29 143 1.3E-24 T 09-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 NA29_RS10050 50982c1ad22d9e271d274b9dafe9f8b9 182 PIRSF PIRSF000239 1 182 9.4E-39 T 09-03-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 NA29_RS04390 4c0773f73ee87687c53173dfe9bcdad4 244 SUPERFAMILY SSF53335 10 238 2.84E-42 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS04390 4c0773f73ee87687c53173dfe9bcdad4 244 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 32 47 - T 09-03-2017 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 NA29_RS04390 4c0773f73ee87687c53173dfe9bcdad4 244 Gene3D G3DSA:3.40.50.150 20 236 1.3E-48 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS04390 4c0773f73ee87687c53173dfe9bcdad4 244 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 21 243 1.9E-73 T 09-03-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 NA29_RS04390 4c0773f73ee87687c53173dfe9bcdad4 244 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 12 243 35.906 T 09-03-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 NA29_RS04390 4c0773f73ee87687c53173dfe9bcdad4 244 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 243 1.1E-86 T 09-03-2017 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 NA29_RS04390 4c0773f73ee87687c53173dfe9bcdad4 244 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 152 166 - T 09-03-2017 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 NA29_RS15650 2a7215d62acb7d42f5910cd2dae1c64f 266 Pfam PF00005 ABC transporter 17 178 1.5E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS15650 2a7215d62acb7d42f5910cd2dae1c64f 266 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 248 7.7E-13 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS15650 2a7215d62acb7d42f5910cd2dae1c64f 266 SUPERFAMILY SSF52540 2 249 4.02E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15650 2a7215d62acb7d42f5910cd2dae1c64f 266 Gene3D G3DSA:3.40.50.300 1 247 1.5E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15650 2a7215d62acb7d42f5910cd2dae1c64f 266 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS15650 2a7215d62acb7d42f5910cd2dae1c64f 266 SMART SM00382 26 234 1.2E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS24910 f7bc3e12cd107fa368a8b37aadf6220e 418 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 341 418 2.4E-20 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NA29_RS24910 f7bc3e12cd107fa368a8b37aadf6220e 418 Pfam PF07559 Flagellar basal body protein FlaE 176 300 2.2E-25 T 09-03-2017 IPR011491 Flagellar hook protein FlgE NA29_RS24910 f7bc3e12cd107fa368a8b37aadf6220e 418 Pfam PF00460 Flagella basal body rod protein 3 33 8.9E-11 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 NA29_RS24910 f7bc3e12cd107fa368a8b37aadf6220e 418 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 09-03-2017 IPR019776 Flagellar basal body rod protein, conserved site NA29_RS24910 f7bc3e12cd107fa368a8b37aadf6220e 418 SUPERFAMILY SSF117143 80 380 4.18E-78 T 09-03-2017 NA29_RS24910 f7bc3e12cd107fa368a8b37aadf6220e 418 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 401 1.1E-102 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G NA29_RS00795 e58adae36b8b84d9e86b9f65a3d4184b 250 Pfam PF01514 Secretory protein of YscJ/FliF family 5 186 5.3E-16 T 09-03-2017 IPR006182 Secretory protein YscJ/FliF NA29_RS00795 e58adae36b8b84d9e86b9f65a3d4184b 250 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 96 111 3.5E-14 T 09-03-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 NA29_RS00795 e58adae36b8b84d9e86b9f65a3d4184b 250 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 116 129 3.5E-14 T 09-03-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 NA29_RS00795 e58adae36b8b84d9e86b9f65a3d4184b 250 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 24 34 3.5E-14 T 09-03-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 NA29_RS00795 e58adae36b8b84d9e86b9f65a3d4184b 250 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 76 89 3.5E-14 T 09-03-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 NA29_RS00795 e58adae36b8b84d9e86b9f65a3d4184b 250 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 165 177 3.5E-14 T 09-03-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 NA29_RS00795 e58adae36b8b84d9e86b9f65a3d4184b 250 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 2 190 1.9E-63 T 09-03-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 NA29_RS19020 3c762daaeb2fa1d691311a80b7b31fdf 693 Pfam PF03169 OPT oligopeptide transporter protein 16 646 3.3E-107 T 09-03-2017 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 NA29_RS19020 3c762daaeb2fa1d691311a80b7b31fdf 693 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 16 647 1.2E-214 T 09-03-2017 IPR004814 Oligopeptide transporter OPT NA29_RS19020 3c762daaeb2fa1d691311a80b7b31fdf 693 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 10 647 3.3E-107 T 09-03-2017 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 NA29_RS10260 1ff6a3fdb0c639c80188cac2e2593674 238 Gene3D G3DSA:3.40.50.720 6 207 2.0E-42 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10260 1ff6a3fdb0c639c80188cac2e2593674 238 SUPERFAMILY SSF51735 5 207 5.86E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10260 1ff6a3fdb0c639c80188cac2e2593674 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 4.9E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10260 1ff6a3fdb0c639c80188cac2e2593674 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 4.9E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10260 1ff6a3fdb0c639c80188cac2e2593674 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 4.9E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10260 1ff6a3fdb0c639c80188cac2e2593674 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.0E-18 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10260 1ff6a3fdb0c639c80188cac2e2593674 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 9.0E-18 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10260 1ff6a3fdb0c639c80188cac2e2593674 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 9.0E-18 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10260 1ff6a3fdb0c639c80188cac2e2593674 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 9.0E-18 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10260 1ff6a3fdb0c639c80188cac2e2593674 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 9.0E-18 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10260 1ff6a3fdb0c639c80188cac2e2593674 238 Pfam PF00106 short chain dehydrogenase 7 186 4.4E-28 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10260 1ff6a3fdb0c639c80188cac2e2593674 238 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS09790 abb8d7b4118db7bcdfa5c91efb1c6bca 432 Pfam PF15984 Bacterial collagen, middle region 85 286 2.7E-58 T 09-03-2017 IPR031929 Bacterial collagen-like protein, middle domain NA29_RS21395 bfad092591f2e94c464e4bbd303d1bdd 412 SUPERFAMILY SSF103473 3 403 3.4E-50 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS21395 bfad092591f2e94c464e4bbd303d1bdd 412 Gene3D G3DSA:1.20.1250.20 225 404 2.1E-12 T 09-03-2017 NA29_RS21395 bfad092591f2e94c464e4bbd303d1bdd 412 Pfam PF07690 Major Facilitator Superfamily 33 331 9.2E-30 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS21395 bfad092591f2e94c464e4bbd303d1bdd 412 Gene3D G3DSA:1.20.1250.20 27 205 2.4E-19 T 09-03-2017 NA29_RS18890 56bb8b63ec9a6d7cbdd5b31b65d1cf75 242 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 116 233 1.6E-14 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS18890 56bb8b63ec9a6d7cbdd5b31b65d1cf75 242 Gene3D G3DSA:1.10.287.950 67 237 6.8E-21 T 09-03-2017 NA29_RS18890 56bb8b63ec9a6d7cbdd5b31b65d1cf75 242 SUPERFAMILY SSF58104 61 238 5.89E-21 T 09-03-2017 NA29_RS18890 56bb8b63ec9a6d7cbdd5b31b65d1cf75 242 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 71 100 2.5E-11 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS18890 56bb8b63ec9a6d7cbdd5b31b65d1cf75 242 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 177 206 2.5E-11 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS18890 56bb8b63ec9a6d7cbdd5b31b65d1cf75 242 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 148 175 2.5E-11 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS12690 f3738fc49a0e535f33e9de94f34992b1 496 Pfam PF00939 Sodium:sulfate symporter transmembrane region 20 496 5.2E-132 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 NA29_RS12690 f3738fc49a0e535f33e9de94f34992b1 496 PIRSF PIRSF002457 3 496 3.1E-138 T 09-03-2017 IPR030676 Citrate carrier CitT-related NA29_RS12690 f3738fc49a0e535f33e9de94f34992b1 496 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 490 5.2E-74 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 NA29_RS16260 eff454cf685204c68f0f5adcc8760061 248 Gene3D G3DSA:1.10.10.10 3 73 2.9E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16260 eff454cf685204c68f0f5adcc8760061 248 SMART SM00345 14 72 2.5E-23 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16260 eff454cf685204c68f0f5adcc8760061 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 8.3E-8 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16260 eff454cf685204c68f0f5adcc8760061 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 8.3E-8 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS16260 eff454cf685204c68f0f5adcc8760061 248 SUPERFAMILY SSF46785 2 76 3.18E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16260 eff454cf685204c68f0f5adcc8760061 248 Pfam PF07729 FCD domain 82 209 8.7E-19 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS16260 eff454cf685204c68f0f5adcc8760061 248 Gene3D G3DSA:1.20.120.530 75 219 2.1E-25 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS16260 eff454cf685204c68f0f5adcc8760061 248 SMART SM00895 82 210 1.8E-15 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS16260 eff454cf685204c68f0f5adcc8760061 248 SUPERFAMILY SSF48008 78 217 4.97E-21 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS16260 eff454cf685204c68f0f5adcc8760061 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 1.0E-21 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS01340 19de6bb459baffff41ad257950808f68 334 Gene3D G3DSA:1.10.3720.10 91 163 2.9E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01340 19de6bb459baffff41ad257950808f68 334 Gene3D G3DSA:1.10.3720.10 200 329 2.9E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01340 19de6bb459baffff41ad257950808f68 334 SUPERFAMILY SSF161098 197 319 9.16E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01340 19de6bb459baffff41ad257950808f68 334 SUPERFAMILY SSF161098 92 160 9.16E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01340 19de6bb459baffff41ad257950808f68 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 333 2.4E-45 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS19485 b9e4faad44f45dc6f62a7213e5059ca3 199 PIRSF PIRSF006305 1 198 5.3E-49 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 NA29_RS19485 b9e4faad44f45dc6f62a7213e5059ca3 199 Gene3D G3DSA:3.90.950.10 3 197 2.2E-66 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like NA29_RS19485 b9e4faad44f45dc6f62a7213e5059ca3 199 Pfam PF02545 Maf-like protein 4 194 2.0E-53 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 NA29_RS19485 b9e4faad44f45dc6f62a7213e5059ca3 199 SUPERFAMILY SSF52972 1 194 6.47E-58 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like NA29_RS19485 b9e4faad44f45dc6f62a7213e5059ca3 199 Hamap MF_00528 Septum formation protein Maf [maf]. 3 199 31.119 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 NA29_RS19485 b9e4faad44f45dc6f62a7213e5059ca3 199 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 193 4.4E-47 T 09-03-2017 IPR003697 Maf-like protein GO:0005737 NA29_RS11710 fb8ec125feb93d74276847c713984f05 584 Pfam PF04984 Phage tail sheath protein 360 579 1.8E-25 T 09-03-2017 IPR007067 Tail sheath protein NA29_RS24665 6b9775e40ed6cb68a3bc860cacfe931c 368 Pfam PF01571 Aminomethyltransferase folate-binding domain 9 262 7.1E-84 T 09-03-2017 IPR006222 Glycine cleavage T-protein-like, N-terminal NA29_RS24665 6b9775e40ed6cb68a3bc860cacfe931c 368 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 270 357 1.2E-14 T 09-03-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NA29_RS24665 6b9775e40ed6cb68a3bc860cacfe931c 368 Gene3D G3DSA:3.30.1360.120 4 55 1.8E-50 T 09-03-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 NA29_RS24665 6b9775e40ed6cb68a3bc860cacfe931c 368 Gene3D G3DSA:3.30.1360.120 148 239 1.8E-50 T 09-03-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 NA29_RS24665 6b9775e40ed6cb68a3bc860cacfe931c 368 SUPERFAMILY SSF103025 3 278 2.92E-90 T 09-03-2017 NA29_RS24665 6b9775e40ed6cb68a3bc860cacfe931c 368 SUPERFAMILY SSF101790 279 364 3.11E-22 T 09-03-2017 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain NA29_RS24665 6b9775e40ed6cb68a3bc860cacfe931c 368 Gene3D G3DSA:2.40.30.110 284 364 1.0E-25 T 09-03-2017 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NA29_RS24665 6b9775e40ed6cb68a3bc860cacfe931c 368 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 361 1.0E-120 T 09-03-2017 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 NA29_RS24665 6b9775e40ed6cb68a3bc860cacfe931c 368 Hamap MF_00259 Aminomethyltransferase [gcvT]. 3 362 43.108 T 09-03-2017 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 NA29_RS24665 6b9775e40ed6cb68a3bc860cacfe931c 368 Gene3D G3DSA:3.30.70.1400 56 133 3.1E-28 T 09-03-2017 NA29_RS24665 6b9775e40ed6cb68a3bc860cacfe931c 368 PIRSF PIRSF006487 1 367 2.3E-77 T 09-03-2017 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 NA29_RS02065 7ff1f159ea66c81b93f48ee5864b5ec5 143 SMART SM00422 4 74 1.4E-17 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS02065 7ff1f159ea66c81b93f48ee5864b5ec5 143 SUPERFAMILY SSF46955 4 119 4.03E-26 T 09-03-2017 IPR009061 Putative DNA-binding domain NA29_RS02065 7ff1f159ea66c81b93f48ee5864b5ec5 143 Gene3D G3DSA:1.10.1660.10 3 59 8.6E-21 T 09-03-2017 NA29_RS02065 7ff1f159ea66c81b93f48ee5864b5ec5 143 Gene3D G3DSA:1.10.1660.10 60 121 1.8E-14 T 09-03-2017 NA29_RS02065 7ff1f159ea66c81b93f48ee5864b5ec5 143 Pfam PF13411 MerR HTH family regulatory protein 4 72 3.9E-16 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS18025 2a46a42ed119575bb902a7c03594d047 389 Gene3D G3DSA:3.40.50.2300 29 223 4.7E-44 T 09-03-2017 NA29_RS18025 2a46a42ed119575bb902a7c03594d047 389 Pfam PF13458 Periplasmic binding protein 31 383 1.3E-51 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS18025 2a46a42ed119575bb902a7c03594d047 389 SUPERFAMILY SSF53822 29 388 3.73E-72 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS04765 b8405a72e32f2c8d88e50fe2a6ab6225 451 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 370 1.9E-69 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS04765 b8405a72e32f2c8d88e50fe2a6ab6225 451 SMART SM00382 172 354 3.4E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS04765 b8405a72e32f2c8d88e50fe2a6ab6225 451 Gene3D G3DSA:3.40.50.300 135 418 1.3E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS04765 b8405a72e32f2c8d88e50fe2a6ab6225 451 SUPERFAMILY SSF52540 105 375 1.57E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS04765 b8405a72e32f2c8d88e50fe2a6ab6225 451 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 361 370 - T 09-03-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS04765 b8405a72e32f2c8d88e50fe2a6ab6225 451 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 35 449 1.8E-149 T 09-03-2017 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS01325 89febd1abae6e9e41ce415f48fb8f5e0 271 Pfam PF01728 FtsJ-like methyltransferase 69 268 1.6E-17 T 09-03-2017 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 NA29_RS01325 89febd1abae6e9e41ce415f48fb8f5e0 271 Gene3D G3DSA:3.10.290.10 6 99 7.2E-14 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS01325 89febd1abae6e9e41ce415f48fb8f5e0 271 Gene3D G3DSA:3.40.50.150 100 203 5.8E-8 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS01325 89febd1abae6e9e41ce415f48fb8f5e0 271 PIRSF PIRSF005578 1 271 8.8E-93 T 09-03-2017 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 NA29_RS01325 89febd1abae6e9e41ce415f48fb8f5e0 271 SUPERFAMILY SSF53335 65 268 1.94E-18 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS01325 89febd1abae6e9e41ce415f48fb8f5e0 271 SUPERFAMILY SSF55174 5 59 9.27E-7 T 09-03-2017 NA29_RS15855 5e93c0adda9b9ec23a90c7425d08ad14 274 SUPERFAMILY SSF52343 98 267 1.7E-21 T 09-03-2017 NA29_RS15855 5e93c0adda9b9ec23a90c7425d08ad14 274 Gene3D G3DSA:2.10.240.10 227 268 5.8E-13 T 09-03-2017 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain NA29_RS15855 5e93c0adda9b9ec23a90c7425d08ad14 274 Gene3D G3DSA:2.40.30.10 4 93 6.7E-23 T 09-03-2017 NA29_RS15855 5e93c0adda9b9ec23a90c7425d08ad14 274 Gene3D G3DSA:3.40.50.80 94 214 3.5E-10 T 09-03-2017 NA29_RS15855 5e93c0adda9b9ec23a90c7425d08ad14 274 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 227 267 1.3E-12 T 09-03-2017 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain NA29_RS15855 5e93c0adda9b9ec23a90c7425d08ad14 274 SUPERFAMILY SSF63380 3 103 6.99E-19 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS15855 5e93c0adda9b9ec23a90c7425d08ad14 274 PIRSF PIRSF006816 1 274 2.0E-44 T 09-03-2017 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 NA29_RS18425 5e67aaeab7cd92d30e48e7dffa447cf2 301 Pfam PF03466 LysR substrate binding domain 90 292 3.8E-35 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS18425 5e67aaeab7cd92d30e48e7dffa447cf2 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.1E-22 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18425 5e67aaeab7cd92d30e48e7dffa447cf2 301 SUPERFAMILY SSF53850 90 291 6.98E-31 T 09-03-2017 NA29_RS18425 5e67aaeab7cd92d30e48e7dffa447cf2 301 SUPERFAMILY SSF46785 1 82 9.92E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18425 5e67aaeab7cd92d30e48e7dffa447cf2 301 Gene3D G3DSA:3.40.190.10 90 174 2.2E-26 T 09-03-2017 NA29_RS18425 5e67aaeab7cd92d30e48e7dffa447cf2 301 Gene3D G3DSA:1.10.10.10 1 83 1.4E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18425 5e67aaeab7cd92d30e48e7dffa447cf2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18425 5e67aaeab7cd92d30e48e7dffa447cf2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18425 5e67aaeab7cd92d30e48e7dffa447cf2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS18425 5e67aaeab7cd92d30e48e7dffa447cf2 301 Gene3D G3DSA:3.40.190.10 175 264 6.1E-31 T 09-03-2017 NA29_RS01785 ae793fc45e3b2e7173efc855865ad628 120 Gene3D G3DSA:2.60.40.1220 25 120 5.5E-25 T 09-03-2017 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like NA29_RS01785 ae793fc45e3b2e7173efc855865ad628 120 SUPERFAMILY SSF81296 25 120 6.86E-24 T 09-03-2017 IPR014756 Immunoglobulin E-set NA29_RS01785 ae793fc45e3b2e7173efc855865ad628 120 Pfam PF04234 CopC domain 26 119 3.4E-22 T 09-03-2017 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 NA29_RS15840 67b86150ff5a2515a757892cefa48931 364 Pfam PF13609 Gram-negative porin 29 346 2.6E-51 T 09-03-2017 NA29_RS15840 67b86150ff5a2515a757892cefa48931 364 SUPERFAMILY SSF56935 39 364 2.72E-65 T 09-03-2017 NA29_RS15840 67b86150ff5a2515a757892cefa48931 364 Gene3D G3DSA:2.40.160.10 39 364 2.0E-75 T 09-03-2017 IPR023614 Porin domain NA29_RS09420 2191075214e6cd4ca7268c37f62b60c9 77 Pfam PF12512 Protein of unknown function (DUF3717) 4 68 2.2E-23 T 09-03-2017 IPR022191 Protein of unknown function DUF3717 NA29_RS04060 8a40a70871b7ede325c0ccb745e495a8 294 SUPERFAMILY SSF53850 48 278 5.34E-39 T 09-03-2017 NA29_RS04060 8a40a70871b7ede325c0ccb745e495a8 294 SMART SM00062 52 280 1.9E-21 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS04060 8a40a70871b7ede325c0ccb745e495a8 294 Gene3D G3DSA:3.40.190.10 130 232 5.5E-7 T 09-03-2017 NA29_RS04060 8a40a70871b7ede325c0ccb745e495a8 294 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 53 277 2.1E-34 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS04060 8a40a70871b7ede325c0ccb745e495a8 294 Gene3D G3DSA:3.40.190.10 49 129 1.6E-24 T 09-03-2017 NA29_RS04060 8a40a70871b7ede325c0ccb745e495a8 294 Gene3D G3DSA:3.40.190.10 239 277 1.6E-24 T 09-03-2017 NA29_RS00730 37c9b175bd2d1ed60027fb3774695e96 467 Gene3D G3DSA:1.10.940.10 46 187 2.7E-15 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 NA29_RS00730 37c9b175bd2d1ed60027fb3774695e96 467 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 48 467 2.3E-86 T 09-03-2017 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS00730 37c9b175bd2d1ed60027fb3774695e96 467 SUPERFAMILY SSF48013 47 188 9.48E-14 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 NA29_RS00730 37c9b175bd2d1ed60027fb3774695e96 467 Pfam PF01189 16S rRNA methyltransferase RsmB/F 284 439 8.9E-49 T 09-03-2017 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS00730 37c9b175bd2d1ed60027fb3774695e96 467 Gene3D G3DSA:3.30.70.1170 212 267 2.6E-23 T 09-03-2017 NA29_RS00730 37c9b175bd2d1ed60027fb3774695e96 467 SUPERFAMILY SSF53335 180 467 1.09E-60 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS00730 37c9b175bd2d1ed60027fb3774695e96 467 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 359 370 - T 09-03-2017 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS00730 37c9b175bd2d1ed60027fb3774695e96 467 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 449 466 8.0E-27 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS00730 37c9b175bd2d1ed60027fb3774695e96 467 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 259 273 8.0E-27 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS00730 37c9b175bd2d1ed60027fb3774695e96 467 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 410 426 8.0E-27 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS00730 37c9b175bd2d1ed60027fb3774695e96 467 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 360 372 8.0E-27 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS00730 37c9b175bd2d1ed60027fb3774695e96 467 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 301 8.0E-27 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS00730 37c9b175bd2d1ed60027fb3774695e96 467 Gene3D G3DSA:1.10.287.730 188 210 5.3E-6 T 09-03-2017 NA29_RS00730 37c9b175bd2d1ed60027fb3774695e96 467 Gene3D G3DSA:3.40.50.150 283 466 2.3E-40 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS07220 3c7851747f221d7dda7d71c2ceec2515 340 PIRSF PIRSF016516 1 337 1.5E-149 T 09-03-2017 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 NA29_RS07220 3c7851747f221d7dda7d71c2ceec2515 340 SUPERFAMILY SSF49785 182 336 5.1E-55 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS07220 3c7851747f221d7dda7d71c2ceec2515 340 TIGRFAM TIGR02961 allantoicase: allantoicase 17 334 1.8E-140 T 09-03-2017 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 NA29_RS07220 3c7851747f221d7dda7d71c2ceec2515 340 SUPERFAMILY SSF49785 14 174 7.08E-60 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS07220 3c7851747f221d7dda7d71c2ceec2515 340 Gene3D G3DSA:2.60.120.260 175 336 3.0E-56 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS07220 3c7851747f221d7dda7d71c2ceec2515 340 Gene3D G3DSA:2.60.120.260 10 173 7.9E-60 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS07220 3c7851747f221d7dda7d71c2ceec2515 340 Pfam PF03561 Allantoicase repeat 193 333 9.8E-46 T 09-03-2017 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 NA29_RS07220 3c7851747f221d7dda7d71c2ceec2515 340 Pfam PF03561 Allantoicase repeat 26 170 7.6E-45 T 09-03-2017 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 NA29_RS07220 3c7851747f221d7dda7d71c2ceec2515 340 Hamap MF_00813 Probable allantoicase [alc]. 6 336 58.188 T 09-03-2017 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 NA29_RS12960 3c7851747f221d7dda7d71c2ceec2515 340 PIRSF PIRSF016516 1 337 1.5E-149 T 09-03-2017 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 NA29_RS12960 3c7851747f221d7dda7d71c2ceec2515 340 SUPERFAMILY SSF49785 182 336 5.1E-55 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS12960 3c7851747f221d7dda7d71c2ceec2515 340 TIGRFAM TIGR02961 allantoicase: allantoicase 17 334 1.8E-140 T 09-03-2017 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 NA29_RS12960 3c7851747f221d7dda7d71c2ceec2515 340 SUPERFAMILY SSF49785 14 174 7.08E-60 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS12960 3c7851747f221d7dda7d71c2ceec2515 340 Gene3D G3DSA:2.60.120.260 175 336 3.0E-56 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS12960 3c7851747f221d7dda7d71c2ceec2515 340 Gene3D G3DSA:2.60.120.260 10 173 7.9E-60 T 09-03-2017 IPR008979 Galactose-binding domain-like NA29_RS12960 3c7851747f221d7dda7d71c2ceec2515 340 Pfam PF03561 Allantoicase repeat 193 333 9.8E-46 T 09-03-2017 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 NA29_RS12960 3c7851747f221d7dda7d71c2ceec2515 340 Pfam PF03561 Allantoicase repeat 26 170 7.6E-45 T 09-03-2017 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 NA29_RS12960 3c7851747f221d7dda7d71c2ceec2515 340 Hamap MF_00813 Probable allantoicase [alc]. 6 336 58.188 T 09-03-2017 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697 NA29_RS04020 7e957fcdcff513f0ad7c75d4714ae2c1 269 SUPERFAMILY SSF52096 4 246 9.03E-70 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS04020 7e957fcdcff513f0ad7c75d4714ae2c1 269 Gene3D G3DSA:3.90.226.10 4 226 6.8E-73 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS04020 7e957fcdcff513f0ad7c75d4714ae2c1 269 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 226 2.4E-50 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS18060 f3fb53a114c834f568c7ec60b7892ba3 97 Pfam PF10734 Protein of unknown function (DUF2523) 11 91 1.4E-10 T 09-03-2017 IPR019670 Protein of unkown function DUF2523 NA29_RS21000 b0ea2f4af699ad41ae7758f13ec37d47 334 Gene3D G3DSA:3.10.290.10 32 80 2.9E-4 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS21000 b0ea2f4af699ad41ae7758f13ec37d47 334 SMART SM00363 32 97 7.4E-4 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS21000 b0ea2f4af699ad41ae7758f13ec37d47 334 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 148 162 - T 09-03-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS21000 b0ea2f4af699ad41ae7758f13ec37d47 334 Pfam PF00849 RNA pseudouridylate synthase 110 258 6.1E-32 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS21000 b0ea2f4af699ad41ae7758f13ec37d47 334 Pfam PF01479 S4 domain 32 78 1.0E-6 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS21000 b0ea2f4af699ad41ae7758f13ec37d47 334 SUPERFAMILY SSF55120 99 328 6.4E-64 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS21000 b0ea2f4af699ad41ae7758f13ec37d47 334 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 29 326 4.1E-81 T 09-03-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS21000 b0ea2f4af699ad41ae7758f13ec37d47 334 SUPERFAMILY SSF55174 31 82 1.41E-7 T 09-03-2017 NA29_RS12370 cf312032fbeb9b07d1e4a5a0b2aa8e0c 624 Gene3D G3DSA:3.40.720.10 81 290 7.9E-66 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NA29_RS12370 cf312032fbeb9b07d1e4a5a0b2aa8e0c 624 Gene3D G3DSA:3.40.720.10 330 463 7.9E-66 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NA29_RS12370 cf312032fbeb9b07d1e4a5a0b2aa8e0c 624 SUPERFAMILY SSF53649 79 484 7.27E-82 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NA29_RS12370 cf312032fbeb9b07d1e4a5a0b2aa8e0c 624 SUPERFAMILY SSF53649 524 594 7.27E-82 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NA29_RS12370 cf312032fbeb9b07d1e4a5a0b2aa8e0c 624 Pfam PF00884 Sulfatase 81 438 1.8E-42 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NA29_RS12370 cf312032fbeb9b07d1e4a5a0b2aa8e0c 624 Gene3D G3DSA:3.30.1120.10 516 597 6.8E-9 T 09-03-2017 NA29_RS22390 441e5310cbc6a0e194502b4f4738cdf6 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 58 19.043 T 09-03-2017 IPR005584 DNA gyrase inhibitor YacG GO:0008270 NA29_RS22390 441e5310cbc6a0e194502b4f4738cdf6 64 Gene3D G3DSA:3.30.50.10 2 57 7.8E-26 T 09-03-2017 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 NA29_RS22390 441e5310cbc6a0e194502b4f4738cdf6 64 SUPERFAMILY SSF57716 3 56 3.99E-21 T 09-03-2017 NA29_RS22390 441e5310cbc6a0e194502b4f4738cdf6 64 Pfam PF03884 Domain of unknown function (DUF329) 5 55 3.2E-25 T 09-03-2017 IPR005584 DNA gyrase inhibitor YacG GO:0008270 NA29_RS10015 941c2e398e9d98d0a8eabb09079c7f12 342 SUPERFAMILY SSF53686 23 328 2.23E-80 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS10015 941c2e398e9d98d0a8eabb09079c7f12 342 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 33 320 1.9E-68 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS10015 941c2e398e9d98d0a8eabb09079c7f12 342 Gene3D G3DSA:3.40.50.1100 87 337 7.3E-67 T 09-03-2017 NA29_RS16835 ee272612196640758c3619b215190d6a 279 Gene3D G3DSA:3.40.50.80 145 272 1.8E-40 T 09-03-2017 NA29_RS16835 ee272612196640758c3619b215190d6a 279 SUPERFAMILY SSF63380 14 147 6.63E-15 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS16835 ee272612196640758c3619b215190d6a 279 Pfam PF04954 Siderophore-interacting protein 151 269 4.5E-36 T 09-03-2017 IPR007037 Siderophore-interacting protein NA29_RS16835 ee272612196640758c3619b215190d6a 279 Pfam PF08021 Siderophore-interacting FAD-binding domain 29 143 4.2E-36 T 09-03-2017 IPR013113 FAD-binding 9, siderophore-interacting NA29_RS16835 ee272612196640758c3619b215190d6a 279 Gene3D G3DSA:2.40.30.10 19 142 1.5E-37 T 09-03-2017 NA29_RS07470 5feea65a7409b896a764d205f9554002 295 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 9 288 4.2E-43 T 09-03-2017 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 NA29_RS07470 5feea65a7409b896a764d205f9554002 295 Pfam PF02558 Ketopantoate reductase PanE/ApbA 8 148 2.1E-23 T 09-03-2017 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 NA29_RS07470 5feea65a7409b896a764d205f9554002 295 SUPERFAMILY SSF51735 8 111 6.87E-8 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS07470 5feea65a7409b896a764d205f9554002 295 SUPERFAMILY SSF51735 143 177 6.87E-8 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS07470 5feea65a7409b896a764d205f9554002 295 SUPERFAMILY SSF48179 169 288 4.76E-21 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS07470 5feea65a7409b896a764d205f9554002 295 Gene3D G3DSA:3.40.50.720 8 177 1.6E-27 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS07470 5feea65a7409b896a764d205f9554002 295 Gene3D G3DSA:1.10.1040.10 178 288 6.4E-22 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS07470 5feea65a7409b896a764d205f9554002 295 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 170 288 4.4E-18 T 09-03-2017 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 NA29_RS05705 502e74322900131aa187a809f26a1065 493 SUPERFAMILY SSF56954 64 477 1.7E-120 T 09-03-2017 NA29_RS05705 502e74322900131aa187a809f26a1065 493 SUPERFAMILY SSF56954 1 30 1.7E-120 T 09-03-2017 NA29_RS05705 502e74322900131aa187a809f26a1065 493 Gene3D G3DSA:2.20.200.10 324 359 2.2E-24 T 09-03-2017 NA29_RS05705 502e74322900131aa187a809f26a1065 493 Gene3D G3DSA:2.20.200.10 109 150 2.2E-24 T 09-03-2017 NA29_RS05705 502e74322900131aa187a809f26a1065 493 Gene3D G3DSA:1.20.1600.10 61 99 1.9E-105 T 09-03-2017 NA29_RS05705 502e74322900131aa187a809f26a1065 493 Gene3D G3DSA:1.20.1600.10 151 323 1.9E-105 T 09-03-2017 NA29_RS05705 502e74322900131aa187a809f26a1065 493 Gene3D G3DSA:1.20.1600.10 361 475 1.9E-105 T 09-03-2017 NA29_RS05705 502e74322900131aa187a809f26a1065 493 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 474 5.7E-134 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NA29_RS05705 502e74322900131aa187a809f26a1065 493 Pfam PF02321 Outer membrane efflux protein 73 263 7.1E-29 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS05705 502e74322900131aa187a809f26a1065 493 Pfam PF02321 Outer membrane efflux protein 294 472 1.4E-27 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS11390 d899f96e6f33065716d2aef1437f781f 95 Pfam PF03795 YCII-related domain 1 82 6.2E-7 T 09-03-2017 IPR005545 YCII-related NA29_RS11390 d899f96e6f33065716d2aef1437f781f 95 Gene3D G3DSA:3.30.70.1060 12 81 1.2E-6 T 09-03-2017 NA29_RS11390 d899f96e6f33065716d2aef1437f781f 95 SUPERFAMILY SSF54909 1 85 2.68E-13 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS19155 c7aeead8e5756bebbd36e96890a3384a 258 SUPERFAMILY SSF53790 2 234 1.7E-62 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 NA29_RS19155 c7aeead8e5756bebbd36e96890a3384a 258 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 09-03-2017 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 NA29_RS19155 c7aeead8e5756bebbd36e96890a3384a 258 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 233 1.6E-74 T 09-03-2017 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 NA29_RS19155 c7aeead8e5756bebbd36e96890a3384a 258 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 213 2.8E-41 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 NA29_RS19155 c7aeead8e5756bebbd36e96890a3384a 258 Gene3D G3DSA:3.40.1010.10 3 118 8.0E-36 T 09-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 NA29_RS19155 c7aeead8e5756bebbd36e96890a3384a 258 Gene3D G3DSA:3.30.950.10 119 235 1.6E-36 T 09-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 NA29_RS18995 72d1a4e64b49a3db5478e984fbfb6f7b 214 Gene3D G3DSA:1.10.3720.10 4 212 4.2E-42 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS18995 72d1a4e64b49a3db5478e984fbfb6f7b 214 SUPERFAMILY SSF161098 5 203 8.76E-46 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS18995 72d1a4e64b49a3db5478e984fbfb6f7b 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 211 1.3E-26 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS09490 06de631b318b628bf6577c1d5a88dafd 489 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 123 141 2.3E-12 T 09-03-2017 NA29_RS09490 06de631b318b628bf6577c1d5a88dafd 489 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 319 2.3E-12 T 09-03-2017 NA29_RS09490 06de631b318b628bf6577c1d5a88dafd 489 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 19 38 2.3E-12 T 09-03-2017 NA29_RS09490 06de631b318b628bf6577c1d5a88dafd 489 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 2.3E-12 T 09-03-2017 NA29_RS09490 06de631b318b628bf6577c1d5a88dafd 489 SUPERFAMILY SSF51905 16 342 7.62E-36 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS09490 06de631b318b628bf6577c1d5a88dafd 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 18 327 1.2E-21 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS09490 06de631b318b628bf6577c1d5a88dafd 489 Pfam PF04324 BFD-like [2Fe-2S] binding domain 394 446 1.8E-9 T 09-03-2017 IPR007419 BFD-like [2Fe-2S]-binding domain NA29_RS09490 06de631b318b628bf6577c1d5a88dafd 489 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 307 325 4.5E-7 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS09490 06de631b318b628bf6577c1d5a88dafd 489 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 124 132 4.5E-7 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS09490 06de631b318b628bf6577c1d5a88dafd 489 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 18 40 4.5E-7 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 NA29_RS09490 06de631b318b628bf6577c1d5a88dafd 489 Gene3D G3DSA:3.50.50.60 130 260 4.7E-10 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS09490 06de631b318b628bf6577c1d5a88dafd 489 PIRSF PIRSF037495 11 482 5.0E-139 T 09-03-2017 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 NA29_RS09490 06de631b318b628bf6577c1d5a88dafd 489 Gene3D G3DSA:3.50.50.60 273 342 4.1E-23 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS09490 06de631b318b628bf6577c1d5a88dafd 489 Gene3D G3DSA:3.50.50.60 18 129 4.1E-23 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08740 70619cc925634e6490135edc7ad9ee0a 305 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 290 4.7E-42 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS08740 70619cc925634e6490135edc7ad9ee0a 305 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 12 303 2.2E-118 T 09-03-2017 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type NA29_RS04930 cd4131abfe9a31112e6813e2294df6c1 87 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 49 3.9E-9 T 09-03-2017 IPR007419 BFD-like [2Fe-2S]-binding domain NA29_RS05655 9d63e3298df98defa82eb1c74aba5be3 142 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 41 103 8.0E-14 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS05655 9d63e3298df98defa82eb1c74aba5be3 142 SUPERFAMILY SSF46785 23 124 3.99E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05655 9d63e3298df98defa82eb1c74aba5be3 142 Gene3D G3DSA:1.10.10.10 24 123 1.1E-37 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10225 d089b4b7fafe43e36d9dd6b195780f06 172 Gene3D G3DSA:3.40.630.30 2 137 3.1E-25 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS10225 d089b4b7fafe43e36d9dd6b195780f06 172 Pfam PF00583 Acetyltransferase (GNAT) family 60 133 2.7E-14 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS10225 d089b4b7fafe43e36d9dd6b195780f06 172 SUPERFAMILY SSF55729 1 136 2.19E-26 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS24265 64cb3768ea482455d0ef23f158e65a7a 307 SUPERFAMILY SSF53850 90 293 2.85E-40 T 09-03-2017 NA29_RS24265 64cb3768ea482455d0ef23f158e65a7a 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 5.2E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS24265 64cb3768ea482455d0ef23f158e65a7a 307 Gene3D G3DSA:1.10.10.10 3 87 2.1E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS24265 64cb3768ea482455d0ef23f158e65a7a 307 Pfam PF03466 LysR substrate binding domain 89 292 1.9E-39 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS24265 64cb3768ea482455d0ef23f158e65a7a 307 Gene3D G3DSA:3.40.190.10 177 264 4.5E-16 T 09-03-2017 NA29_RS24265 64cb3768ea482455d0ef23f158e65a7a 307 SUPERFAMILY SSF46785 1 113 5.45E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS24265 64cb3768ea482455d0ef23f158e65a7a 307 Gene3D G3DSA:3.40.190.10 91 176 1.4E-23 T 09-03-2017 NA29_RS20940 1cf787ca2437030a0d2f17472af65f3a 79 Gene3D G3DSA:1.10.1200.10 3 76 7.2E-35 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS20940 1cf787ca2437030a0d2f17472af65f3a 79 SUPERFAMILY SSF47336 2 76 1.09E-22 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS20940 1cf787ca2437030a0d2f17472af65f3a 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 2.2E-35 T 09-03-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS20940 1cf787ca2437030a0d2f17472af65f3a 79 Pfam PF00550 Phosphopantetheine attachment site 6 71 6.0E-17 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain NA29_RS20940 1cf787ca2437030a0d2f17472af65f3a 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site NA29_RS20940 1cf787ca2437030a0d2f17472af65f3a 79 SMART SM00823 Phosphopantetheine attachment site 5 63 0.0091 T 09-03-2017 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 NA29_RS20940 1cf787ca2437030a0d2f17472af65f3a 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.069 T 09-03-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS06180 c4a19db7a97dd9878b50bdb64a826f54 1030 Gene3D G3DSA:1.10.1060.10 545 567 1.0E-13 T 09-03-2017 NA29_RS06180 c4a19db7a97dd9878b50bdb64a826f54 1030 Gene3D G3DSA:1.10.1060.10 613 707 1.0E-13 T 09-03-2017 NA29_RS06180 c4a19db7a97dd9878b50bdb64a826f54 1030 Pfam PF01565 FAD binding domain 77 214 3.0E-39 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NA29_RS06180 c4a19db7a97dd9878b50bdb64a826f54 1030 Pfam PF13183 4Fe-4S dicluster domain 613 690 1.2E-9 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NA29_RS06180 c4a19db7a97dd9878b50bdb64a826f54 1030 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 676 687 - T 09-03-2017 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site NA29_RS06180 c4a19db7a97dd9878b50bdb64a826f54 1030 Pfam PF02913 FAD linked oxidases, C-terminal domain 304 552 2.6E-50 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 NA29_RS06180 c4a19db7a97dd9878b50bdb64a826f54 1030 Gene3D G3DSA:1.10.45.10 516 544 1.5E-4 T 09-03-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 NA29_RS06180 c4a19db7a97dd9878b50bdb64a826f54 1030 Gene3D G3DSA:3.30.43.10 46 131 2.8E-15 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NA29_RS06180 c4a19db7a97dd9878b50bdb64a826f54 1030 SUPERFAMILY SSF55103 307 558 6.21E-53 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NA29_RS06180 c4a19db7a97dd9878b50bdb64a826f54 1030 Pfam PF02754 Cysteine-rich domain 792 872 0.086 T 09-03-2017 IPR004017 Cysteine-rich domain NA29_RS06180 c4a19db7a97dd9878b50bdb64a826f54 1030 SUPERFAMILY SSF56176 44 304 1.8E-56 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS06180 c4a19db7a97dd9878b50bdb64a826f54 1030 SUPERFAMILY SSF46548 613 705 7.85E-9 T 09-03-2017 IPR009051 Alpha-helical ferredoxin GO:0051536 NA29_RS06180 c4a19db7a97dd9878b50bdb64a826f54 1030 Gene3D G3DSA:3.30.465.10 132 304 3.2E-39 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS25320 9398d2f9ddfdbde2d27461063f85c788 213 SMART SM00347 32 132 1.1E-7 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS25320 9398d2f9ddfdbde2d27461063f85c788 213 SUPERFAMILY SSF46785 7 146 3.09E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS25320 9398d2f9ddfdbde2d27461063f85c788 213 Pfam PF12802 MarR family 37 97 1.2E-11 T 09-03-2017 NA29_RS25320 9398d2f9ddfdbde2d27461063f85c788 213 Gene3D G3DSA:1.10.10.10 5 147 8.5E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS25320 9398d2f9ddfdbde2d27461063f85c788 213 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 106 - T 09-03-2017 IPR023187 Transcriptional regulator MarR-type, conserved site NA29_RS09315 77fd6bc1ddc5d6f5fb93b988f63504cc 212 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 09-03-2017 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 NA29_RS09315 77fd6bc1ddc5d6f5fb93b988f63504cc 212 Gene3D G3DSA:3.40.810.20 3 210 6.0E-94 T 09-03-2017 NA29_RS09315 77fd6bc1ddc5d6f5fb93b988f63504cc 212 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 208 8.7E-99 T 09-03-2017 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 NA29_RS09315 77fd6bc1ddc5d6f5fb93b988f63504cc 212 Pfam PF01144 Coenzyme A transferase 7 201 6.7E-41 T 09-03-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NA29_RS09315 77fd6bc1ddc5d6f5fb93b988f63504cc 212 SMART SM00882 6 202 2.0E-81 T 09-03-2017 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 NA29_RS09315 77fd6bc1ddc5d6f5fb93b988f63504cc 212 SUPERFAMILY SSF100950 3 210 8.38E-74 T 09-03-2017 NA29_RS05075 e8821a437431b48cee5b9764e6c2e786 399 SUPERFAMILY SSF89796 1 399 2.49E-129 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS05075 e8821a437431b48cee5b9764e6c2e786 399 Pfam PF02515 CoA-transferase family III 5 376 9.7E-128 T 09-03-2017 IPR003673 CoA-transferase family III GO:0003824 NA29_RS05075 e8821a437431b48cee5b9764e6c2e786 399 Gene3D G3DSA:3.40.50.10540 2 219 6.7E-108 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS05075 e8821a437431b48cee5b9764e6c2e786 399 Gene3D G3DSA:3.40.50.10540 308 399 6.7E-108 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS05075 e8821a437431b48cee5b9764e6c2e786 399 Gene3D G3DSA:3.30.1540.10 225 307 3.1E-26 T 09-03-2017 NA29_RS17125 27f1a88dd5850ad390105c719eb37ecf 255 SMART SM00420 6 57 9.7E-9 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NA29_RS17125 27f1a88dd5850ad390105c719eb37ecf 255 SMART SM01134 73 233 2.5E-58 T 09-03-2017 NA29_RS17125 27f1a88dd5850ad390105c719eb37ecf 255 Gene3D G3DSA:1.10.10.10 6 78 7.2E-5 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17125 27f1a88dd5850ad390105c719eb37ecf 255 Pfam PF00455 DeoR C terminal sensor domain 76 231 5.9E-42 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain NA29_RS17125 27f1a88dd5850ad390105c719eb37ecf 255 SUPERFAMILY SSF100950 76 234 2.56E-28 T 09-03-2017 NA29_RS17125 27f1a88dd5850ad390105c719eb37ecf 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 2.2E-11 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NA29_RS17125 27f1a88dd5850ad390105c719eb37ecf 255 SUPERFAMILY SSF46785 5 58 7.19E-7 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17125 27f1a88dd5850ad390105c719eb37ecf 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 39 - T 09-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 NA29_RS17125 27f1a88dd5850ad390105c719eb37ecf 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 1.4E-5 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NA29_RS17125 27f1a88dd5850ad390105c719eb37ecf 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 1.4E-5 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 NA29_RS17125 27f1a88dd5850ad390105c719eb37ecf 255 Gene3D G3DSA:3.40.50.1360 79 219 7.1E-13 T 09-03-2017 NA29_RS11245 cb3b85162fcb0816ecf934702ffef61c 411 SUPERFAMILY SSF51556 55 359 3.71E-78 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS11245 cb3b85162fcb0816ecf934702ffef61c 411 SUPERFAMILY SSF51338 18 63 1.32E-9 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS11245 cb3b85162fcb0816ecf934702ffef61c 411 Pfam PF07969 Amidohydrolase family 77 387 1.2E-28 T 09-03-2017 IPR013108 Amidohydrolase 3 NA29_RS11245 cb3b85162fcb0816ecf934702ffef61c 411 Pfam PF07969 Amidohydrolase family 43 67 1.3E-7 T 09-03-2017 IPR013108 Amidohydrolase 3 NA29_RS11245 cb3b85162fcb0816ecf934702ffef61c 411 Gene3D G3DSA:3.20.20.140 64 350 3.0E-98 T 09-03-2017 NA29_RS11245 cb3b85162fcb0816ecf934702ffef61c 411 Gene3D G3DSA:2.30.40.10 18 63 1.3E-9 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS09055 fa81dde7316bf30f855cc7f662635fe4 318 Pfam PF07819 PGAP1-like protein 182 263 5.5E-7 T 09-03-2017 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 NA29_RS09055 fa81dde7316bf30f855cc7f662635fe4 318 SUPERFAMILY SSF53474 119 287 1.54E-27 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS09055 fa81dde7316bf30f855cc7f662635fe4 318 Gene3D G3DSA:3.40.50.1820 117 309 3.3E-32 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS04310 66079b148e9bec12beebe55f7cf8a52e 293 SUPERFAMILY SSF53697 100 283 1.44E-38 T 09-03-2017 NA29_RS04310 66079b148e9bec12beebe55f7cf8a52e 293 Gene3D G3DSA:3.40.50.10490 100 273 5.3E-30 T 09-03-2017 NA29_RS04310 66079b148e9bec12beebe55f7cf8a52e 293 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 77 9.6E-16 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 NA29_RS04310 66079b148e9bec12beebe55f7cf8a52e 293 SUPERFAMILY SSF46689 5 77 2.15E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS04310 66079b148e9bec12beebe55f7cf8a52e 293 Gene3D G3DSA:1.10.10.10 5 77 3.3E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04310 66079b148e9bec12beebe55f7cf8a52e 293 Pfam PF01380 SIS domain 131 258 2.7E-18 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 NA29_RS24980 112057571eaf5ae087f787ecc3d851f8 224 SUPERFAMILY SSF75708 25 223 2.22E-63 T 09-03-2017 NA29_RS24980 112057571eaf5ae087f787ecc3d851f8 224 Pfam PF04344 Chemotaxis phosphatase, CheZ 27 224 4.8E-78 T 09-03-2017 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 NA29_RS24980 112057571eaf5ae087f787ecc3d851f8 224 PIRSF PIRSF002884 16 224 1.2E-81 T 09-03-2017 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 NA29_RS24980 112057571eaf5ae087f787ecc3d851f8 224 Gene3D G3DSA:1.10.287.500 46 178 2.5E-53 T 09-03-2017 NA29_RS24980 112057571eaf5ae087f787ecc3d851f8 224 Gene3D G3DSA:1.20.5.590 22 45 1.2E-8 T 09-03-2017 NA29_RS14745 ef2db580673f5c547317af76b9b00e50 506 PIRSF PIRSF000485 1 481 3.2E-159 T 09-03-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 NA29_RS14745 ef2db580673f5c547317af76b9b00e50 506 SUPERFAMILY SSF53271 250 482 7.53E-71 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS14745 ef2db580673f5c547317af76b9b00e50 506 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 3.3E-155 T 09-03-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 NA29_RS14745 ef2db580673f5c547317af76b9b00e50 506 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.729 T 09-03-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 NA29_RS14745 ef2db580673f5c547317af76b9b00e50 506 SUPERFAMILY SSF56235 2 257 6.43E-70 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS14745 ef2db580673f5c547317af76b9b00e50 506 Gene3D G3DSA:3.40.50.2020 271 442 5.0E-46 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS14745 ef2db580673f5c547317af76b9b00e50 506 Gene3D G3DSA:3.60.20.10 2 257 9.5E-59 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS14745 ef2db580673f5c547317af76b9b00e50 506 Pfam PF00156 Phosphoribosyl transferase domain 279 393 1.5E-9 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 NA29_RS14745 ef2db580673f5c547317af76b9b00e50 506 Pfam PF13537 Glutamine amidotransferase domain 81 212 6.4E-15 T 09-03-2017 IPR017932 Glutamine amidotransferase type 2 domain NA29_RS16645 149064c483136c209714ff2b42c071d4 185 Pfam PF02325 YGGT family 110 174 1.9E-13 T 09-03-2017 IPR003425 CCB3/YggT GO:0016020 NA29_RS16645 149064c483136c209714ff2b42c071d4 185 Pfam PF02325 YGGT family 12 80 2.6E-14 T 09-03-2017 IPR003425 CCB3/YggT GO:0016020 NA29_RS04750 3e2bdaa5708749d87419fab2bf845a0d 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 1.2E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS04750 3e2bdaa5708749d87419fab2bf845a0d 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 1.2E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS04750 3e2bdaa5708749d87419fab2bf845a0d 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 1.2E-13 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS04750 3e2bdaa5708749d87419fab2bf845a0d 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS04750 3e2bdaa5708749d87419fab2bf845a0d 219 SUPERFAMILY SSF46894 153 217 1.5E-20 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS04750 3e2bdaa5708749d87419fab2bf845a0d 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 212 4.8E-19 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS04750 3e2bdaa5708749d87419fab2bf845a0d 219 Gene3D G3DSA:1.10.10.10 123 217 2.8E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04750 3e2bdaa5708749d87419fab2bf845a0d 219 SUPERFAMILY SSF52172 6 135 1.24E-26 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS04750 3e2bdaa5708749d87419fab2bf845a0d 219 SMART SM00421 155 212 2.2E-23 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS04750 3e2bdaa5708749d87419fab2bf845a0d 219 Gene3D G3DSA:3.40.50.2300 5 122 3.3E-27 T 09-03-2017 NA29_RS04750 3e2bdaa5708749d87419fab2bf845a0d 219 Pfam PF00072 Response regulator receiver domain 7 118 3.3E-19 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS04750 3e2bdaa5708749d87419fab2bf845a0d 219 SMART SM00448 5 118 4.8E-19 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS19290 fedf040625aadc4f293993dbdd022f6e 214 SMART SM00248 89 119 1.6 T 09-03-2017 IPR002110 Ankyrin repeat GO:0005515 NA29_RS19290 fedf040625aadc4f293993dbdd022f6e 214 SMART SM00248 38 78 14.0 T 09-03-2017 IPR002110 Ankyrin repeat GO:0005515 NA29_RS19290 fedf040625aadc4f293993dbdd022f6e 214 SMART SM00248 148 177 0.0095 T 09-03-2017 IPR002110 Ankyrin repeat GO:0005515 NA29_RS19290 fedf040625aadc4f293993dbdd022f6e 214 SUPERFAMILY SSF48403 8 204 3.22E-21 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain NA29_RS19290 fedf040625aadc4f293993dbdd022f6e 214 Gene3D G3DSA:1.25.40.20 6 208 6.7E-25 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain NA29_RS19290 fedf040625aadc4f293993dbdd022f6e 214 Pfam PF12796 Ankyrin repeats (3 copies) 94 179 4.7E-9 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain NA29_RS18355 fb524707d0ab9938019f4e0a597f038f 175 SUPERFAMILY SSF47413 13 63 2.31E-5 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS18355 fb524707d0ab9938019f4e0a597f038f 175 Gene3D G3DSA:1.10.260.40 17 65 2.4E-5 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS20045 4c8476981b3e867bdd6148db4174bd92 196 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 7 179 1.7E-46 T 09-03-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 NA29_RS20045 4c8476981b3e867bdd6148db4174bd92 196 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 38 52 - T 09-03-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 NA29_RS20045 4c8476981b3e867bdd6148db4174bd92 196 SUPERFAMILY SSF55120 3 182 8.48E-40 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS20045 4c8476981b3e867bdd6148db4174bd92 196 Pfam PF00849 RNA pseudouridylate synthase 3 148 2.8E-13 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS10310 a59182f50b87a064667745ad3f0db205 439 Pfam PF02803 Thiolase, C-terminal domain 315 438 4.7E-31 T 09-03-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 NA29_RS10310 a59182f50b87a064667745ad3f0db205 439 Pfam PF00108 Thiolase, N-terminal domain 16 285 4.0E-46 T 09-03-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 NA29_RS10310 a59182f50b87a064667745ad3f0db205 439 Gene3D G3DSA:3.40.47.10 223 297 2.9E-45 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS10310 a59182f50b87a064667745ad3f0db205 439 Gene3D G3DSA:3.40.47.10 16 135 2.9E-45 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS10310 a59182f50b87a064667745ad3f0db205 439 SUPERFAMILY SSF53901 16 291 8.03E-53 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS10310 a59182f50b87a064667745ad3f0db205 439 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 18 438 2.4E-111 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS10310 a59182f50b87a064667745ad3f0db205 439 PIRSF PIRSF000429 10 439 1.8E-98 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS10310 a59182f50b87a064667745ad3f0db205 439 Gene3D G3DSA:3.40.47.10 307 438 2.7E-44 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS10310 a59182f50b87a064667745ad3f0db205 439 Gene3D G3DSA:3.40.47.10 179 222 2.7E-44 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS10310 a59182f50b87a064667745ad3f0db205 439 SUPERFAMILY SSF53901 316 439 7.82E-31 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS07920 a7d3b5cc79bf21ee38552df3157711e7 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 193 211 5.4E-8 T 09-03-2017 NA29_RS07920 a7d3b5cc79bf21ee38552df3157711e7 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 337 5.4E-8 T 09-03-2017 NA29_RS07920 a7d3b5cc79bf21ee38552df3157711e7 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.4E-8 T 09-03-2017 NA29_RS07920 a7d3b5cc79bf21ee38552df3157711e7 454 Gene3D G3DSA:3.50.50.60 2 120 3.8E-19 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07920 a7d3b5cc79bf21ee38552df3157711e7 454 Gene3D G3DSA:3.50.50.60 121 146 1.1E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07920 a7d3b5cc79bf21ee38552df3157711e7 454 Gene3D G3DSA:3.50.50.60 190 365 1.1E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07920 a7d3b5cc79bf21ee38552df3157711e7 454 SUPERFAMILY SSF51905 2 150 3.13E-26 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07920 a7d3b5cc79bf21ee38552df3157711e7 454 SUPERFAMILY SSF51905 186 369 3.13E-26 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07920 a7d3b5cc79bf21ee38552df3157711e7 454 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 358 1.3E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS07920 a7d3b5cc79bf21ee38552df3157711e7 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 9.2E-7 T 09-03-2017 NA29_RS07920 a7d3b5cc79bf21ee38552df3157711e7 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 193 218 9.2E-7 T 09-03-2017 NA29_RS07920 a7d3b5cc79bf21ee38552df3157711e7 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 330 337 9.2E-7 T 09-03-2017 NA29_RS10570 ab1ac35beb431b3bcec67a9e024f3d66 587 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 426 445 - T 09-03-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 NA29_RS10570 ab1ac35beb431b3bcec67a9e024f3d66 587 SUPERFAMILY SSF52518 371 572 1.53E-62 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS10570 ab1ac35beb431b3bcec67a9e024f3d66 587 Gene3D G3DSA:3.40.50.1220 185 342 2.4E-58 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS10570 ab1ac35beb431b3bcec67a9e024f3d66 587 Gene3D G3DSA:3.40.50.970 343 565 4.2E-67 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS10570 ab1ac35beb431b3bcec67a9e024f3d66 587 Gene3D G3DSA:3.40.50.970 4 174 2.4E-66 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS10570 ab1ac35beb431b3bcec67a9e024f3d66 587 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 389 550 7.1E-44 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NA29_RS10570 ab1ac35beb431b3bcec67a9e024f3d66 587 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 190 321 3.1E-42 T 09-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 NA29_RS10570 ab1ac35beb431b3bcec67a9e024f3d66 587 SUPERFAMILY SSF52518 4 171 3.53E-56 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS10570 ab1ac35beb431b3bcec67a9e024f3d66 587 SUPERFAMILY SSF52467 154 351 1.31E-53 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS10570 ab1ac35beb431b3bcec67a9e024f3d66 587 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 167 2.0E-54 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 NA29_RS10570 ab1ac35beb431b3bcec67a9e024f3d66 587 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 572 1.2E-183 T 09-03-2017 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 NA29_RS01995 9cde39e9adce74341ed66c5b7ef4470d 339 Gene3D G3DSA:3.20.20.70 7 313 2.6E-103 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS01995 9cde39e9adce74341ed66c5b7ef4470d 339 SMART SM00876 221 313 2.9E-44 T 09-03-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 NA29_RS01995 9cde39e9adce74341ed66c5b7ef4470d 339 SMART SM00729 44 256 1.3E-40 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NA29_RS01995 9cde39e9adce74341ed66c5b7ef4470d 339 TIGRFAM TIGR00433 bioB: biotin synthase 16 311 9.3E-124 T 09-03-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 NA29_RS01995 9cde39e9adce74341ed66c5b7ef4470d 339 Pfam PF04055 Radical SAM superfamily 51 206 4.0E-18 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 NA29_RS01995 9cde39e9adce74341ed66c5b7ef4470d 339 Hamap MF_01694 Biotin synthase [bioB]. 6 314 41.875 T 09-03-2017 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 NA29_RS01995 9cde39e9adce74341ed66c5b7ef4470d 339 SUPERFAMILY SSF102114 6 312 4.05E-93 T 09-03-2017 NA29_RS01995 9cde39e9adce74341ed66c5b7ef4470d 339 PIRSF PIRSF001619 1 320 1.5E-132 T 09-03-2017 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 NA29_RS01995 9cde39e9adce74341ed66c5b7ef4470d 339 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 221 311 9.3E-19 T 09-03-2017 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 NA29_RS06445 c8581b79645fb3889f55b36f92779450 365 Hamap MF_00625 Selenide, water dikinase [selD]. 21 365 43.637 T 09-03-2017 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 NA29_RS06445 c8581b79645fb3889f55b36f92779450 365 Gene3D G3DSA:3.90.650.10 182 364 5.8E-14 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain NA29_RS06445 c8581b79645fb3889f55b36f92779450 365 SUPERFAMILY SSF56042 181 359 6.73E-46 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain NA29_RS06445 c8581b79645fb3889f55b36f92779450 365 Gene3D G3DSA:3.30.1330.10 60 179 7.6E-30 T 09-03-2017 IPR016188 PurM-like, N-terminal domain NA29_RS06445 c8581b79645fb3889f55b36f92779450 365 Pfam PF02769 AIR synthase related protein, C-terminal domain 186 358 4.5E-26 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain NA29_RS06445 c8581b79645fb3889f55b36f92779450 365 PIRSF PIRSF036407 16 365 1.1E-112 T 09-03-2017 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 NA29_RS06445 c8581b79645fb3889f55b36f92779450 365 Pfam PF00586 AIR synthase related protein, N-terminal domain 67 174 6.7E-20 T 09-03-2017 IPR016188 PurM-like, N-terminal domain NA29_RS06445 c8581b79645fb3889f55b36f92779450 365 SUPERFAMILY SSF55326 23 178 1.79E-38 T 09-03-2017 NA29_RS06445 c8581b79645fb3889f55b36f92779450 365 TIGRFAM TIGR00476 selD: selenide, water dikinase 23 332 4.4E-133 T 09-03-2017 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 NA29_RS07980 ca95c01e69c2a1164334fa91255f31fe 148 Gene3D G3DSA:1.10.1510.10 1 90 2.2E-32 T 09-03-2017 NA29_RS07980 ca95c01e69c2a1164334fa91255f31fe 148 SUPERFAMILY SSF89095 1 146 6.8E-41 T 09-03-2017 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 NA29_RS07980 ca95c01e69c2a1164334fa91255f31fe 148 Gene3D G3DSA:1.10.10.410 91 147 6.2E-22 T 09-03-2017 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal NA29_RS07980 ca95c01e69c2a1164334fa91255f31fe 148 Pfam PF09424 Yqey-like protein 4 146 1.3E-53 T 09-03-2017 IPR019004 Uncharacterised domain YOR215C, mitochondrial NA29_RS09775 0007cb54b79b1b703ed981a190152a55 150 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 30 148 3.2E-27 T 09-03-2017 IPR019223 Domain of unknown function DUF2147 NA29_RS04890 8648735876f05ad8676c68e131c8702b 135 SUPERFAMILY SSF143744 2 132 1.1E-37 T 09-03-2017 NA29_RS04890 8648735876f05ad8676c68e131c8702b 135 Pfam PF03928 Haem-degrading 7 129 3.5E-32 T 09-03-2017 IPR005624 Haem-degrading NA29_RS11655 c60c7c1bc11e056ad69037d0012686fb 310 Pfam PF01820 D-ala D-ala ligase N-terminus 3 82 2.2E-10 T 09-03-2017 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS11655 c60c7c1bc11e056ad69037d0012686fb 310 SUPERFAMILY SSF52440 1 90 5.37E-17 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS11655 c60c7c1bc11e056ad69037d0012686fb 310 SUPERFAMILY SSF56059 93 300 1.39E-32 T 09-03-2017 NA29_RS11655 c60c7c1bc11e056ad69037d0012686fb 310 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 59 70 - T 09-03-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS11655 c60c7c1bc11e056ad69037d0012686fb 310 Gene3D G3DSA:3.30.1490.20 104 164 4.7E-5 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NA29_RS11655 c60c7c1bc11e056ad69037d0012686fb 310 Gene3D G3DSA:3.30.470.20 176 301 1.0E-31 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS11655 c60c7c1bc11e056ad69037d0012686fb 310 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 246 273 - T 09-03-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS11655 c60c7c1bc11e056ad69037d0012686fb 310 Pfam PF07478 D-ala D-ala ligase C-terminus 124 300 1.5E-33 T 09-03-2017 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS11655 c60c7c1bc11e056ad69037d0012686fb 310 Gene3D G3DSA:3.40.50.20 2 79 3.7E-13 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS13575 a1dc4de6d8bdbd4f4fa8db6f870943e1 100 SUPERFAMILY SSF50249 1 97 5.14E-12 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS13575 a1dc4de6d8bdbd4f4fa8db6f870943e1 100 Gene3D G3DSA:2.40.50.140 2 98 6.5E-22 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS13575 a1dc4de6d8bdbd4f4fa8db6f870943e1 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 2 94 1.7E-27 T 09-03-2017 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 NA29_RS13575 a1dc4de6d8bdbd4f4fa8db6f870943e1 100 PIRSF PIRSF003135 1 97 1.1E-12 T 09-03-2017 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 NA29_RS13900 a487e8a049435d73ed998f9cf7b23ff2 394 Pfam PF13379 NMT1-like family 34 270 8.0E-49 T 09-03-2017 NA29_RS13900 a487e8a049435d73ed998f9cf7b23ff2 394 SUPERFAMILY SSF53850 38 270 3.67E-39 T 09-03-2017 NA29_RS13900 a487e8a049435d73ed998f9cf7b23ff2 394 Gene3D G3DSA:3.40.190.10 120 254 2.4E-11 T 09-03-2017 NA29_RS22055 ee064e355af4624104c150fe040b2b0c 209 Gene3D G3DSA:2.60.120.10 8 118 6.7E-30 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS22055 ee064e355af4624104c150fe040b2b0c 209 Pfam PF05962 HutD 7 179 5.2E-44 T 09-03-2017 IPR010282 Uncharacterised protein family HutD/Ves NA29_RS22055 ee064e355af4624104c150fe040b2b0c 209 SUPERFAMILY SSF51182 3 178 2.63E-42 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS15065 ddf066137b91fa718670dff9c08786af 199 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 31 158 4.5E-39 T 09-03-2017 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15065 ddf066137b91fa718670dff9c08786af 199 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 120 141 - T 09-03-2017 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15065 ddf066137b91fa718670dff9c08786af 199 SUPERFAMILY SSF143243 7 180 1.57E-53 T 09-03-2017 NA29_RS15065 ddf066137b91fa718670dff9c08786af 199 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 86 147 2.0E-26 T 09-03-2017 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15065 ddf066137b91fa718670dff9c08786af 199 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 7 167 34.106 T 09-03-2017 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15065 ddf066137b91fa718670dff9c08786af 199 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 32 160 1.8E-42 T 09-03-2017 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS05435 6b40e000c3fc814e3729094b197aaab5 197 Pfam PF06684 Amino acid synthesis 5 179 7.5E-65 T 09-03-2017 IPR009569 Amino acid synthesis, putative NA29_RS05435 6b40e000c3fc814e3729094b197aaab5 197 SUPERFAMILY SSF160519 3 192 3.27E-68 T 09-03-2017 IPR009569 Amino acid synthesis, putative NA29_RS05435 6b40e000c3fc814e3729094b197aaab5 197 Gene3D G3DSA:3.30.1330.110 4 192 8.1E-74 T 09-03-2017 IPR009569 Amino acid synthesis, putative NA29_RS16745 89930bb5f515a564a9ce679e5f038550 332 PIRSF PIRSF018266 7 332 1.4E-58 T 09-03-2017 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NA29_RS16745 89930bb5f515a564a9ce679e5f038550 332 Pfam PF04773 FecR protein 125 221 8.4E-10 T 09-03-2017 IPR006860 FecR protein NA29_RS16745 89930bb5f515a564a9ce679e5f038550 332 Pfam PF16344 Domain of unknown function (DUF4974) 233 318 2.0E-8 T 09-03-2017 IPR032508 Protein FecR, C-terminal NA29_RS16740 4748c0ba3ca4e0b09f79806791ef11a5 4574 SMART SM00912 143 259 9.7E-18 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS16740 4748c0ba3ca4e0b09f79806791ef11a5 4574 Pfam PF12545 Filamentous haemagglutinin family outer membrane protein 4347 4457 1.6E-39 T 09-03-2017 IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739 NA29_RS16740 4748c0ba3ca4e0b09f79806791ef11a5 4574 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 180 253 2.1E-19 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS16740 4748c0ba3ca4e0b09f79806791ef11a5 4574 SUPERFAMILY SSF51126 290 433 9.42E-32 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS16740 4748c0ba3ca4e0b09f79806791ef11a5 4574 SUPERFAMILY SSF51126 157 263 9.42E-32 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS16740 4748c0ba3ca4e0b09f79806791ef11a5 4574 SUPERFAMILY SSF51126 482 506 9.42E-32 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS16740 4748c0ba3ca4e0b09f79806791ef11a5 4574 Pfam PF05860 haemagglutination activity domain 158 253 4.4E-17 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS19805 42c902355269d6f98e4bfa0617afcb21 388 SUPERFAMILY SSF111369 60 305 3.27E-28 T 09-03-2017 NA29_RS19805 42c902355269d6f98e4bfa0617afcb21 388 Gene3D G3DSA:2.40.50.100 68 101 2.4E-17 T 09-03-2017 NA29_RS19805 42c902355269d6f98e4bfa0617afcb21 388 Gene3D G3DSA:2.40.50.100 190 221 2.4E-17 T 09-03-2017 NA29_RS19805 42c902355269d6f98e4bfa0617afcb21 388 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 371 1.0E-51 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NA29_RS19805 42c902355269d6f98e4bfa0617afcb21 388 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 301 5.4E-22 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NA29_RS11495 daced2cfbdfb3fd4ddad106d90dafb6b 338 Gene3D G3DSA:1.50.10.110 5 329 1.5E-70 T 09-03-2017 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NA29_RS11495 daced2cfbdfb3fd4ddad106d90dafb6b 338 Pfam PF05426 Alginate lyase 38 274 9.1E-49 T 09-03-2017 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 NA29_RS11495 daced2cfbdfb3fd4ddad106d90dafb6b 338 SUPERFAMILY SSF48230 13 328 1.83E-47 T 09-03-2017 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 NA29_RS04615 c942a9110c0671c8f764332e0160e461 281 Gene3D G3DSA:1.10.10.10 1 77 2.2E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04615 c942a9110c0671c8f764332e0160e461 281 SUPERFAMILY SSF46689 2 77 3.94E-21 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS04615 c942a9110c0671c8f764332e0160e461 281 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 74 4.2E-22 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 NA29_RS04615 c942a9110c0671c8f764332e0160e461 281 Gene3D G3DSA:3.40.50.10490 93 259 9.8E-41 T 09-03-2017 NA29_RS04615 c942a9110c0671c8f764332e0160e461 281 SUPERFAMILY SSF53697 92 268 9.2E-43 T 09-03-2017 NA29_RS04615 c942a9110c0671c8f764332e0160e461 281 Pfam PF01380 SIS domain 122 250 1.0E-24 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 NA29_RS11340 d3a1ebea91b2a4829227a3573ded346f 228 SUPERFAMILY SSF53335 8 210 7.12E-30 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS11340 d3a1ebea91b2a4829227a3573ded346f 228 Gene3D G3DSA:3.40.50.150 8 224 1.4E-27 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS11340 d3a1ebea91b2a4829227a3573ded346f 228 Pfam PF13649 Methyltransferase domain 47 145 8.2E-14 T 09-03-2017 NA29_RS10835 b4f06c36a3572e342602b2c678a92b7a 608 SUPERFAMILY SSF53474 246 527 2.44E-34 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS10835 b4f06c36a3572e342602b2c678a92b7a 608 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 99 271 5.4E-47 T 09-03-2017 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 NA29_RS10835 b4f06c36a3572e342602b2c678a92b7a 608 Pfam PF12551 Poly-beta-hydroxybutyrate polymerase N terminal 30 69 2.3E-15 T 09-03-2017 IPR022211 Poly-beta-hydroxybutyrate polymerase N-terminal NA29_RS10835 b4f06c36a3572e342602b2c678a92b7a 608 Gene3D G3DSA:3.40.50.1820 243 526 2.6E-27 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS17055 34eff111b4b2cd6a75f6994eb583832b 212 SUPERFAMILY SSF88659 104 186 9.53E-11 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS17055 34eff111b4b2cd6a75f6994eb583832b 212 Gene3D G3DSA:1.10.1740.10 26 119 4.8E-6 T 09-03-2017 NA29_RS17055 34eff111b4b2cd6a75f6994eb583832b 212 SUPERFAMILY SSF88946 26 112 8.24E-8 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS17055 34eff111b4b2cd6a75f6994eb583832b 212 Gene3D G3DSA:1.10.10.10 127 185 8.4E-5 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17055 34eff111b4b2cd6a75f6994eb583832b 212 Pfam PF04542 Sigma-70 region 2 33 97 2.2E-6 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS10965 1150f7a7c3c41ed5cc769efa7529e1ad 309 SUPERFAMILY SSF46785 4 83 1.86E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10965 1150f7a7c3c41ed5cc769efa7529e1ad 309 Gene3D G3DSA:3.40.190.10 89 163 4.4E-6 T 09-03-2017 NA29_RS10965 1150f7a7c3c41ed5cc769efa7529e1ad 309 Gene3D G3DSA:1.10.10.10 3 80 2.5E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10965 1150f7a7c3c41ed5cc769efa7529e1ad 309 SUPERFAMILY SSF53850 90 297 5.27E-40 T 09-03-2017 NA29_RS10965 1150f7a7c3c41ed5cc769efa7529e1ad 309 Gene3D G3DSA:3.40.190.10 164 261 1.5E-15 T 09-03-2017 NA29_RS10965 1150f7a7c3c41ed5cc769efa7529e1ad 309 Pfam PF03466 LysR substrate binding domain 88 293 1.0E-39 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS10965 1150f7a7c3c41ed5cc769efa7529e1ad 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.3E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS13650 dec12eaedca5ac259943195fa0991fcb 432 Gene3D G3DSA:1.20.1600.10 35 422 9.4E-38 T 09-03-2017 NA29_RS13650 dec12eaedca5ac259943195fa0991fcb 432 Pfam PF02321 Outer membrane efflux protein 265 422 2.5E-16 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS13650 dec12eaedca5ac259943195fa0991fcb 432 Pfam PF02321 Outer membrane efflux protein 42 225 3.1E-18 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS13650 dec12eaedca5ac259943195fa0991fcb 432 SUPERFAMILY SSF56954 15 423 1.22E-53 T 09-03-2017 NA29_RS17605 f2fd665431c59a5bc56dc875cb53813c 153 SUPERFAMILY SSF46785 1 59 8.11E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17605 f2fd665431c59a5bc56dc875cb53813c 153 Gene3D G3DSA:1.10.10.10 2 52 5.2E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17605 f2fd665431c59a5bc56dc875cb53813c 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 48 2.3E-16 T 09-03-2017 NA29_RS17605 f2fd665431c59a5bc56dc875cb53813c 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.5E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS17605 f2fd665431c59a5bc56dc875cb53813c 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.5E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS17605 f2fd665431c59a5bc56dc875cb53813c 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.5E-10 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS17605 f2fd665431c59a5bc56dc875cb53813c 153 SUPERFAMILY SSF54909 61 149 4.29E-19 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS17605 f2fd665431c59a5bc56dc875cb53813c 153 Gene3D G3DSA:3.30.70.920 55 137 2.5E-26 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS17605 f2fd665431c59a5bc56dc875cb53813c 153 Pfam PF01037 Lrp/AsnC ligand binding domain 68 140 8.9E-18 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS17605 f2fd665431c59a5bc56dc875cb53813c 153 SMART SM00344 1 110 4.9E-38 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NA29_RS23395 4ceea6bfc49489b8eaa1e2cbf1df08b8 239 Pfam PF02167 Cytochrome C1 family 35 237 2.0E-20 T 09-03-2017 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 NA29_RS23395 4ceea6bfc49489b8eaa1e2cbf1df08b8 239 PRINTS PR00603 Cytochrome C1 signature 43 62 6.7E-9 T 09-03-2017 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 NA29_RS23395 4ceea6bfc49489b8eaa1e2cbf1df08b8 239 PRINTS PR00603 Cytochrome C1 signature 104 128 6.7E-9 T 09-03-2017 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 NA29_RS23395 4ceea6bfc49489b8eaa1e2cbf1df08b8 239 PRINTS PR00603 Cytochrome C1 signature 185 204 6.7E-9 T 09-03-2017 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 NA29_RS23395 4ceea6bfc49489b8eaa1e2cbf1df08b8 239 PRINTS PR00603 Cytochrome C1 signature 204 219 6.7E-9 T 09-03-2017 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 NA29_RS23395 4ceea6bfc49489b8eaa1e2cbf1df08b8 239 Gene3D G3DSA:1.10.760.10 20 204 3.2E-65 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS23395 4ceea6bfc49489b8eaa1e2cbf1df08b8 239 SUPERFAMILY SSF46626 24 203 2.17E-49 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS23395 4ceea6bfc49489b8eaa1e2cbf1df08b8 239 Gene3D G3DSA:1.20.5.100 208 239 3.8E-8 T 09-03-2017 NA29_RS15010 3cab7c33ac8714dbc3d3f18b46d08c4d 486 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 1 473 18.256 T 09-03-2017 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 NA29_RS15010 3cab7c33ac8714dbc3d3f18b46d08c4d 486 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 4 471 2.5E-141 T 09-03-2017 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 NA29_RS15010 3cab7c33ac8714dbc3d3f18b46d08c4d 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 211 232 5.4E-7 T 09-03-2017 NA29_RS15010 3cab7c33ac8714dbc3d3f18b46d08c4d 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 416 435 5.4E-7 T 09-03-2017 NA29_RS15010 3cab7c33ac8714dbc3d3f18b46d08c4d 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 68 93 5.4E-7 T 09-03-2017 NA29_RS15010 3cab7c33ac8714dbc3d3f18b46d08c4d 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 144 165 5.4E-7 T 09-03-2017 NA29_RS15010 3cab7c33ac8714dbc3d3f18b46d08c4d 486 Pfam PF00361 Proton-conducting membrane transporter 121 423 3.1E-75 T 09-03-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS18550 27a0b9fd8f7c04a55aed585cdc6b341a 501 Pfam PF05227 CHASE3 domain 34 160 5.4E-10 T 09-03-2017 IPR007891 CHASE3 NA29_RS18550 27a0b9fd8f7c04a55aed585cdc6b341a 501 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 438 5.6E-8 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS18550 27a0b9fd8f7c04a55aed585cdc6b341a 501 SMART SM00387 345 440 2.5E-8 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS18550 27a0b9fd8f7c04a55aed585cdc6b341a 501 Gene3D G3DSA:3.30.565.10 312 441 6.2E-11 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS18550 27a0b9fd8f7c04a55aed585cdc6b341a 501 SUPERFAMILY SSF55874 312 438 1.57E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS18550 27a0b9fd8f7c04a55aed585cdc6b341a 501 Pfam PF07730 Histidine kinase 240 307 5.5E-14 T 09-03-2017 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 NA29_RS08530 ee14cb6184cdbfd3ab77957f22037a82 366 SUPERFAMILY SSF55073 198 354 8.63E-37 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS08530 ee14cb6184cdbfd3ab77957f22037a82 366 Pfam PF05230 MASE2 domain 23 110 2.3E-19 T 09-03-2017 IPR007894 MASE2 NA29_RS08530 ee14cb6184cdbfd3ab77957f22037a82 366 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 191 354 5.0E-36 T 09-03-2017 IPR000160 GGDEF domain NA29_RS08530 ee14cb6184cdbfd3ab77957f22037a82 366 Gene3D G3DSA:3.30.70.270 195 355 5.6E-39 T 09-03-2017 NA29_RS08530 ee14cb6184cdbfd3ab77957f22037a82 366 SMART SM00267 182 354 7.9E-41 T 09-03-2017 IPR000160 GGDEF domain NA29_RS08530 ee14cb6184cdbfd3ab77957f22037a82 366 Pfam PF00990 Diguanylate cyclase, GGDEF domain 194 350 1.5E-31 T 09-03-2017 IPR000160 GGDEF domain NA29_RS08865 7bc55c58a0563d0f70d2fd76d6670efc 341 Pfam PF02625 XdhC and CoxI family 15 83 3.8E-24 T 09-03-2017 IPR003777 XdhC- CoxI NA29_RS08865 7bc55c58a0563d0f70d2fd76d6670efc 341 Pfam PF13478 XdhC Rossmann domain 165 306 9.7E-37 T 09-03-2017 IPR027051 XdhC Rossmann domain NA29_RS08865 7bc55c58a0563d0f70d2fd76d6670efc 341 Gene3D G3DSA:3.40.50.20 164 199 3.3E-5 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS25125 742d50b4da864dca939fc0dd4e49ebc7 194 Pfam PF08212 Lipocalin-like domain 41 189 2.3E-47 T 09-03-2017 IPR000566 Lipocalin/cytosolic fatty-acid binding domain NA29_RS25125 742d50b4da864dca939fc0dd4e49ebc7 194 SUPERFAMILY SSF50814 34 191 6.86E-41 T 09-03-2017 IPR011038 Calycin-like NA29_RS25125 742d50b4da864dca939fc0dd4e49ebc7 194 Gene3D G3DSA:2.40.128.20 11 190 6.6E-51 T 09-03-2017 IPR012674 Calycin NA29_RS25125 742d50b4da864dca939fc0dd4e49ebc7 194 PRINTS PR01171 Bacterial lipocalin signature 178 188 1.4E-8 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 NA29_RS25125 742d50b4da864dca939fc0dd4e49ebc7 194 PRINTS PR01171 Bacterial lipocalin signature 151 162 1.4E-8 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 NA29_RS25125 742d50b4da864dca939fc0dd4e49ebc7 194 PRINTS PR01171 Bacterial lipocalin signature 41 55 1.4E-8 T 09-03-2017 IPR002446 Lipocalin, bacterial GO:0005215 NA29_RS25125 742d50b4da864dca939fc0dd4e49ebc7 194 ProSitePatterns PS00213 Lipocalin signature. 42 53 - T 09-03-2017 IPR022272 Lipocalin family conserved site NA29_RS25125 742d50b4da864dca939fc0dd4e49ebc7 194 PIRSF PIRSF036893 1 194 4.8E-56 T 09-03-2017 IPR022271 Lipocalin, ApoD type NA29_RS02605 b9b1b2452ab0080274f758d2f6b9682b 312 SUPERFAMILY SSF88946 38 146 2.75E-43 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS02605 b9b1b2452ab0080274f758d2f6b9682b 312 Gene3D G3DSA:1.10.601.10 39 145 2.0E-40 T 09-03-2017 NA29_RS02605 b9b1b2452ab0080274f758d2f6b9682b 312 PRINTS PR00046 Major sigma-70 factor signature 124 132 2.9E-16 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS02605 b9b1b2452ab0080274f758d2f6b9682b 312 PRINTS PR00046 Major sigma-70 factor signature 293 304 2.9E-16 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS02605 b9b1b2452ab0080274f758d2f6b9682b 312 PRINTS PR00046 Major sigma-70 factor signature 278 293 2.9E-16 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS02605 b9b1b2452ab0080274f758d2f6b9682b 312 PRINTS PR00046 Major sigma-70 factor signature 100 113 2.9E-16 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS02605 b9b1b2452ab0080274f758d2f6b9682b 312 Pfam PF04542 Sigma-70 region 2 76 146 2.5E-19 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS02605 b9b1b2452ab0080274f758d2f6b9682b 312 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 37 309 2.3E-124 T 09-03-2017 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 NA29_RS02605 b9b1b2452ab0080274f758d2f6b9682b 312 Pfam PF04545 Sigma-70, region 4 250 305 2.8E-14 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS02605 b9b1b2452ab0080274f758d2f6b9682b 312 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 278 304 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS02605 b9b1b2452ab0080274f758d2f6b9682b 312 Gene3D G3DSA:1.10.10.10 245 309 5.1E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS02605 b9b1b2452ab0080274f758d2f6b9682b 312 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 71 307 5.1E-32 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS02605 b9b1b2452ab0080274f758d2f6b9682b 312 SUPERFAMILY SSF88659 213 310 2.99E-15 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS02605 b9b1b2452ab0080274f758d2f6b9682b 312 Pfam PF00140 Sigma-70 factor, region 1.2 39 69 5.0E-9 T 09-03-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS02605 b9b1b2452ab0080274f758d2f6b9682b 312 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 100 113 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS02605 b9b1b2452ab0080274f758d2f6b9682b 312 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 19 310 52.1 T 09-03-2017 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 NA29_RS02855 68448b6cfe6a883713ed5ae1e6783578 190 Gene3D G3DSA:3.40.50.300 7 184 7.8E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02855 68448b6cfe6a883713ed5ae1e6783578 190 SMART SM00072 3 188 0.0054 T 09-03-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit NA29_RS02855 68448b6cfe6a883713ed5ae1e6783578 190 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 5 186 1.1E-58 T 09-03-2017 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532 NA29_RS02855 68448b6cfe6a883713ed5ae1e6783578 190 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 3 185 30.72 T 09-03-2017 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532 NA29_RS02855 68448b6cfe6a883713ed5ae1e6783578 190 SUPERFAMILY SSF52540 2 186 4.06E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS12170 9b99daa4ff5bfd525f81ae8f86c35c3c 1166 SUPERFAMILY SSF103515 850 1166 1.44E-49 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS12170 9b99daa4ff5bfd525f81ae8f86c35c3c 1166 SMART SM00869 887 1156 2.4E-48 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS12170 9b99daa4ff5bfd525f81ae8f86c35c3c 1166 Pfam PF03797 Autotransporter beta-domain 886 1149 1.2E-45 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS12170 9b99daa4ff5bfd525f81ae8f86c35c3c 1166 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 629 1166 1.4E-23 T 09-03-2017 IPR006315 Outer membrane autotransporter barrel GO:0019867 NA29_RS12170 9b99daa4ff5bfd525f81ae8f86c35c3c 1166 Gene3D G3DSA:2.40.128.130 881 1166 4.3E-48 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS12170 9b99daa4ff5bfd525f81ae8f86c35c3c 1166 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 23 4.7E-9 T 09-03-2017 IPR024973 ESPR domain NA29_RS14370 3862c2669e04dc59ab163aad0a84af97 299 TIGRFAM TIGR01932 hflC: HflC protein 149 284 1.2E-44 T 09-03-2017 IPR010200 HflC GO:0016021|GO:0052547 NA29_RS14370 3862c2669e04dc59ab163aad0a84af97 299 PIRSF PIRSF005651 1 294 1.2E-90 T 09-03-2017 IPR010200 HflC GO:0016021|GO:0052547 NA29_RS14370 3862c2669e04dc59ab163aad0a84af97 299 SMART SM00244 20 185 1.2E-18 T 09-03-2017 IPR001107 Band 7 domain NA29_RS14370 3862c2669e04dc59ab163aad0a84af97 299 Pfam PF01145 SPFH domain / Band 7 family 24 205 2.1E-28 T 09-03-2017 IPR001107 Band 7 domain NA29_RS14370 3862c2669e04dc59ab163aad0a84af97 299 SUPERFAMILY SSF117892 54 191 2.48E-26 T 09-03-2017 IPR001107 Band 7 domain NA29_RS06175 d17a6fd370b49f05b4490d933e1aa97e 425 Gene3D G3DSA:1.20.1250.20 222 407 1.4E-31 T 09-03-2017 NA29_RS06175 d17a6fd370b49f05b4490d933e1aa97e 425 Pfam PF07690 Major Facilitator Superfamily 14 369 2.2E-61 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS06175 d17a6fd370b49f05b4490d933e1aa97e 425 PIRSF PIRSF002808 2 419 1.1E-33 T 09-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 NA29_RS06175 d17a6fd370b49f05b4490d933e1aa97e 425 SUPERFAMILY SSF103473 4 408 7.19E-90 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS06175 d17a6fd370b49f05b4490d933e1aa97e 425 Gene3D G3DSA:1.20.1250.20 9 198 1.5E-52 T 09-03-2017 NA29_RS09720 82d014e15177868b62266bc5a244298e 210 PIRSF PIRSF006324 1 209 6.6E-46 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS09720 82d014e15177868b62266bc5a244298e 210 Pfam PF01810 LysE type translocator 17 207 1.5E-29 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS22215 d3abb0295517658034ab5a0136291b01 174 Pfam PF08534 Redoxin 26 162 1.2E-22 T 09-03-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 NA29_RS22215 d3abb0295517658034ab5a0136291b01 174 ProSitePatterns PS00194 Thioredoxin family active site. 64 82 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 NA29_RS22215 d3abb0295517658034ab5a0136291b01 174 SUPERFAMILY SSF52833 1 173 3.44E-35 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS22215 d3abb0295517658034ab5a0136291b01 174 Gene3D G3DSA:3.40.30.10 3 174 4.9E-40 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS21480 aa7bf49f01d1455a0e9efcb526f8ae79 495 Pfam PF03972 MmgE/PrpD family 53 478 2.3E-131 T 09-03-2017 IPR005656 MmgE/PrpD GO:0016829 NA29_RS21480 aa7bf49f01d1455a0e9efcb526f8ae79 495 Gene3D G3DSA:3.30.1330.120 312 433 3.9E-25 T 09-03-2017 NA29_RS21480 aa7bf49f01d1455a0e9efcb526f8ae79 495 SUPERFAMILY SSF103378 51 484 7.06E-119 T 09-03-2017 IPR005656 MmgE/PrpD GO:0016829 NA29_RS25140 ff3ab1363a7b7e3d9e32438729deca65 248 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS25140 ff3ab1363a7b7e3d9e32438729deca65 248 SMART SM00382 30 220 6.9E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS25140 ff3ab1363a7b7e3d9e32438729deca65 248 Pfam PF00005 ABC transporter 23 171 6.9E-25 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS25140 ff3ab1363a7b7e3d9e32438729deca65 248 Gene3D G3DSA:3.40.50.300 3 243 3.0E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25140 ff3ab1363a7b7e3d9e32438729deca65 248 SUPERFAMILY SSF52540 4 242 1.36E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13775 0dc00a04263000d711f9b0fba3560ed3 144 Pfam PF13474 SnoaL-like domain 14 128 4.8E-19 T 09-03-2017 IPR009959 Polyketide cyclase SnoaL-like domain NA29_RS13775 0dc00a04263000d711f9b0fba3560ed3 144 SUPERFAMILY SSF54427 3 127 1.25E-32 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS13775 0dc00a04263000d711f9b0fba3560ed3 144 Gene3D G3DSA:3.10.450.50 8 131 2.1E-35 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS07720 262ae8553c9c218b8eee3bc5fcfbfa3c 393 Pfam PF13609 Gram-negative porin 8 360 2.4E-45 T 09-03-2017 NA29_RS07720 262ae8553c9c218b8eee3bc5fcfbfa3c 393 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 199 211 3.4E-10 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS07720 262ae8553c9c218b8eee3bc5fcfbfa3c 393 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 336 353 3.4E-10 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS07720 262ae8553c9c218b8eee3bc5fcfbfa3c 393 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 105 115 3.4E-10 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS07720 262ae8553c9c218b8eee3bc5fcfbfa3c 393 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 166 177 3.4E-10 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS07720 262ae8553c9c218b8eee3bc5fcfbfa3c 393 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 61 72 3.4E-10 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS07720 262ae8553c9c218b8eee3bc5fcfbfa3c 393 Gene3D G3DSA:2.40.160.10 26 393 6.5E-94 T 09-03-2017 IPR023614 Porin domain NA29_RS07720 262ae8553c9c218b8eee3bc5fcfbfa3c 393 PRINTS PR00184 Neisseria sp. porin signature 200 217 3.1E-12 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS07720 262ae8553c9c218b8eee3bc5fcfbfa3c 393 PRINTS PR00184 Neisseria sp. porin signature 333 357 3.1E-12 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS07720 262ae8553c9c218b8eee3bc5fcfbfa3c 393 PRINTS PR00184 Neisseria sp. porin signature 63 88 3.1E-12 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS07720 262ae8553c9c218b8eee3bc5fcfbfa3c 393 PRINTS PR00184 Neisseria sp. porin signature 165 182 3.1E-12 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS07720 262ae8553c9c218b8eee3bc5fcfbfa3c 393 SUPERFAMILY SSF56935 26 393 1.63E-82 T 09-03-2017 NA29_RS12270 c44be5ebfb023f52c5894357276bdd6f 173 SMART SM00226 9 147 3.9E-38 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily NA29_RS12270 c44be5ebfb023f52c5894357276bdd6f 173 Gene3D G3DSA:3.40.50.270 8 145 8.2E-42 T 09-03-2017 NA29_RS12270 c44be5ebfb023f52c5894357276bdd6f 173 SUPERFAMILY SSF52788 9 147 8.24E-41 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily NA29_RS12270 c44be5ebfb023f52c5894357276bdd6f 173 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 11 141 8.1E-18 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily NA29_RS01820 23795a7ad3a8f0cb3ba27e5149a592a6 448 SUPERFAMILY SSF49503 172 325 2.79E-34 T 09-03-2017 IPR008972 Cupredoxin NA29_RS01820 23795a7ad3a8f0cb3ba27e5149a592a6 448 SUPERFAMILY SSF49503 47 195 3.6E-40 T 09-03-2017 IPR008972 Cupredoxin NA29_RS01820 23795a7ad3a8f0cb3ba27e5149a592a6 448 Gene3D G3DSA:2.60.40.420 43 188 3.9E-39 T 09-03-2017 IPR008972 Cupredoxin NA29_RS01820 23795a7ad3a8f0cb3ba27e5149a592a6 448 Pfam PF07731 Multicopper oxidase 217 331 3.6E-23 T 09-03-2017 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 NA29_RS01820 23795a7ad3a8f0cb3ba27e5149a592a6 448 Gene3D G3DSA:2.60.40.420 390 404 5.5E-29 T 09-03-2017 IPR008972 Cupredoxin NA29_RS01820 23795a7ad3a8f0cb3ba27e5149a592a6 448 Gene3D G3DSA:2.60.40.420 192 324 5.5E-29 T 09-03-2017 IPR008972 Cupredoxin NA29_RS01820 23795a7ad3a8f0cb3ba27e5149a592a6 448 Pfam PF07732 Multicopper oxidase 86 192 7.9E-36 T 09-03-2017 IPR011707 Multicopper oxidase, type 3 GO:0005507 NA29_RS19135 97b5d96c310b686398f43a6c7ca9ba61 132 Gene3D G3DSA:3.90.1590.10 2 131 6.3E-41 T 09-03-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 NA29_RS19135 97b5d96c310b686398f43a6c7ca9ba61 132 SUPERFAMILY SSF51316 1 131 9.1E-44 T 09-03-2017 IPR011057 Mss4-like NA29_RS19135 97b5d96c310b686398f43a6c7ca9ba61 132 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 108 4.1E-17 T 09-03-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 NA29_RS15620 3b40de0121d8b96ab9fbd85fad14bb0c 529 SUPERFAMILY SSF161098 2 247 2.09E-41 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS15620 3b40de0121d8b96ab9fbd85fad14bb0c 529 Gene3D G3DSA:1.10.3720.10 287 527 7.5E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS15620 3b40de0121d8b96ab9fbd85fad14bb0c 529 SUPERFAMILY SSF161098 274 527 3.66E-33 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS15620 3b40de0121d8b96ab9fbd85fad14bb0c 529 Gene3D G3DSA:1.10.3720.10 36 245 8.9E-31 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS15620 3b40de0121d8b96ab9fbd85fad14bb0c 529 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 340 528 2.5E-6 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS15620 3b40de0121d8b96ab9fbd85fad14bb0c 529 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 59 245 6.3E-13 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS06480 d84569422e297dcccda4262be06b5f25 475 Gene3D G3DSA:1.20.1260.10 102 261 1.6E-8 T 09-03-2017 IPR012347 Ferritin-related NA29_RS06480 d84569422e297dcccda4262be06b5f25 475 TIGRFAM TIGR03225 benzo_boxB: benzoyl-CoA oxygenase, B subunit 4 474 5.7E-280 T 09-03-2017 IPR017635 Benzoyl-CoA oxygenase, B subunit KEGG: 00361+1.14.13.20|MetaCyc: PWY-6085|MetaCyc: PWY-6086 NA29_RS06480 d84569422e297dcccda4262be06b5f25 475 SUPERFAMILY SSF47240 107 363 2.43E-48 T 09-03-2017 IPR009078 Ferritin-like superfamily NA29_RS01550 a3fdf7003d8f0b5bcd25e99a548d3297 453 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 272 294 0.085 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS01550 a3fdf7003d8f0b5bcd25e99a548d3297 453 Gene3D G3DSA:2.160.10.10 243 319 2.3E-18 T 09-03-2017 NA29_RS01550 a3fdf7003d8f0b5bcd25e99a548d3297 453 Gene3D G3DSA:2.160.10.10 320 447 1.5E-31 T 09-03-2017 NA29_RS01550 a3fdf7003d8f0b5bcd25e99a548d3297 453 SUPERFAMILY SSF51161 250 433 1.3E-50 T 09-03-2017 IPR011004 Trimeric LpxA-like NA29_RS01550 a3fdf7003d8f0b5bcd25e99a548d3297 453 Gene3D G3DSA:3.90.550.10 1 238 3.4E-66 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS01550 a3fdf7003d8f0b5bcd25e99a548d3297 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 448 39.868 T 09-03-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 NA29_RS01550 a3fdf7003d8f0b5bcd25e99a548d3297 453 SUPERFAMILY SSF53448 1 248 2.6E-57 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS01550 a3fdf7003d8f0b5bcd25e99a548d3297 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 1 450 2.1E-182 T 09-03-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 NA29_RS01550 a3fdf7003d8f0b5bcd25e99a548d3297 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 296 329 1.8E-6 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS01550 a3fdf7003d8f0b5bcd25e99a548d3297 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 391 423 4.5E-5 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS01550 a3fdf7003d8f0b5bcd25e99a548d3297 453 Pfam PF12804 MobA-like NTP transferase domain 4 126 3.8E-21 T 09-03-2017 IPR025877 MobA-like NTP transferase NA29_RS24625 01802acb178ff6af2edc7ca3c0d8b449 1304 Gene3D G3DSA:1.10.2060.10 138 255 2.8E-53 T 09-03-2017 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 NA29_RS24625 01802acb178ff6af2edc7ca3c0d8b449 1304 Gene3D G3DSA:1.20.5.550 86 136 2.2E-21 T 09-03-2017 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 NA29_RS24625 01802acb178ff6af2edc7ca3c0d8b449 1304 Gene3D G3DSA:3.20.20.220 256 608 1.6E-120 T 09-03-2017 IPR029041 FAD-linked oxidoreductase-like NA29_RS24625 01802acb178ff6af2edc7ca3c0d8b449 1304 SUPERFAMILY SSF53720 630 1100 6.02E-130 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS24625 01802acb178ff6af2edc7ca3c0d8b449 1304 Gene3D G3DSA:3.40.605.10 649 889 1.9E-68 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS24625 01802acb178ff6af2edc7ca3c0d8b449 1304 Pfam PF00171 Aldehyde dehydrogenase family 653 1097 3.6E-116 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS24625 01802acb178ff6af2edc7ca3c0d8b449 1304 Gene3D G3DSA:3.40.309.10 890 1077 3.5E-45 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS24625 01802acb178ff6af2edc7ca3c0d8b449 1304 SUPERFAMILY SSF47598 4 45 1.98E-8 T 09-03-2017 IPR010985 Ribbon-helix-helix GO:0006355 NA29_RS24625 01802acb178ff6af2edc7ca3c0d8b449 1304 SUPERFAMILY SSF51730 257 608 3.14E-122 T 09-03-2017 IPR029041 FAD-linked oxidoreductase-like NA29_RS24625 01802acb178ff6af2edc7ca3c0d8b449 1304 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 143 254 1.1E-46 T 09-03-2017 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 NA29_RS24625 01802acb178ff6af2edc7ca3c0d8b449 1304 Pfam PF01619 Proline dehydrogenase 265 564 9.9E-98 T 09-03-2017 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 NA29_RS24625 01802acb178ff6af2edc7ca3c0d8b449 1304 SUPERFAMILY SSF81935 87 256 1.7E-63 T 09-03-2017 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 NA29_RS24625 01802acb178ff6af2edc7ca3c0d8b449 1304 PIRSF PIRSF000197 73 1304 0.0 T 09-03-2017 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 NA29_RS24625 01802acb178ff6af2edc7ca3c0d8b449 1304 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 902 913 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS24625 01802acb178ff6af2edc7ca3c0d8b449 1304 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 601 1100 3.6E-240 T 09-03-2017 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 NA29_RS16990 07a8428cb2cb45442bbfc5afb1db9f68 200 Gene3D G3DSA:3.40.50.2300 3 126 4.0E-31 T 09-03-2017 NA29_RS16990 07a8428cb2cb45442bbfc5afb1db9f68 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 192 8.4E-18 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS16990 07a8428cb2cb45442bbfc5afb1db9f68 200 SUPERFAMILY SSF52172 3 133 6.55E-33 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS16990 07a8428cb2cb45442bbfc5afb1db9f68 200 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS16990 07a8428cb2cb45442bbfc5afb1db9f68 200 Pfam PF00072 Response regulator receiver domain 7 119 1.7E-19 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS16990 07a8428cb2cb45442bbfc5afb1db9f68 200 SUPERFAMILY SSF46894 130 198 4.08E-18 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS16990 07a8428cb2cb45442bbfc5afb1db9f68 200 Gene3D G3DSA:1.10.10.10 137 198 5.2E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16990 07a8428cb2cb45442bbfc5afb1db9f68 200 SMART SM00448 5 119 1.8E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS16990 07a8428cb2cb45442bbfc5afb1db9f68 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 4.0E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS16990 07a8428cb2cb45442bbfc5afb1db9f68 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 4.0E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS16990 07a8428cb2cb45442bbfc5afb1db9f68 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 4.0E-10 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS16990 07a8428cb2cb45442bbfc5afb1db9f68 200 SMART SM00421 135 192 3.6E-20 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS00965 c92c48c65f78404ae261fb7ea5bf42c3 99 SUPERFAMILY SSF141000 3 97 1.29E-24 T 09-03-2017 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 NA29_RS00965 c92c48c65f78404ae261fb7ea5bf42c3 99 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 94 6.0E-16 T 09-03-2017 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 NA29_RS00965 c92c48c65f78404ae261fb7ea5bf42c3 99 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 99 4.0E-27 T 09-03-2017 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 NA29_RS00965 c92c48c65f78404ae261fb7ea5bf42c3 99 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 99 20.086 T 09-03-2017 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 NA29_RS13580 b8913b6956266abc4b18c1c058b6920b 125 Gene3D G3DSA:3.30.70.60 1 104 3.7E-42 T 09-03-2017 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 NA29_RS13580 b8913b6956266abc4b18c1c058b6920b 125 Pfam PF01250 Ribosomal protein S6 3 91 2.3E-27 T 09-03-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS13580 b8913b6956266abc4b18c1c058b6920b 125 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.652 T 09-03-2017 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 NA29_RS13580 b8913b6956266abc4b18c1c058b6920b 125 SUPERFAMILY SSF54995 1 104 4.84E-37 T 09-03-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS13580 b8913b6956266abc4b18c1c058b6920b 125 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.5E-33 T 09-03-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS21865 750fa9ee106ef643f87047002d2e3311 455 Gene3D G3DSA:3.30.70.270 285 450 2.1E-49 T 09-03-2017 NA29_RS21865 750fa9ee106ef643f87047002d2e3311 455 Pfam PF00990 Diguanylate cyclase, GGDEF domain 284 447 4.0E-47 T 09-03-2017 IPR000160 GGDEF domain NA29_RS21865 750fa9ee106ef643f87047002d2e3311 455 SMART SM00267 273 451 8.9E-54 T 09-03-2017 IPR000160 GGDEF domain NA29_RS21865 750fa9ee106ef643f87047002d2e3311 455 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 283 450 2.9E-47 T 09-03-2017 IPR000160 GGDEF domain NA29_RS21865 750fa9ee106ef643f87047002d2e3311 455 SUPERFAMILY SSF55073 288 449 1.1E-42 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS21865 750fa9ee106ef643f87047002d2e3311 455 Pfam PF17158 Membrane-associated sensor, integral membrane domain 50 269 1.6E-13 T 09-03-2017 IPR033424 Membrane-associated sensor domain NA29_RS02305 fa47891810ecf68c0f94247d77a854e4 335 SMART SM00729 95 304 3.1E-18 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NA29_RS02305 fa47891810ecf68c0f94247d77a854e4 335 PIRSF PIRSF005963 1 334 1.6E-129 T 09-03-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 NA29_RS02305 fa47891810ecf68c0f94247d77a854e4 335 SUPERFAMILY SSF102114 63 329 2.88E-70 T 09-03-2017 NA29_RS02305 fa47891810ecf68c0f94247d77a854e4 335 Gene3D G3DSA:3.20.20.70 63 323 7.8E-75 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS02305 fa47891810ecf68c0f94247d77a854e4 335 TIGRFAM TIGR00510 lipA: lipoyl synthase 45 327 2.1E-129 T 09-03-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 NA29_RS02305 fa47891810ecf68c0f94247d77a854e4 335 Pfam PF04055 Radical SAM superfamily 102 261 3.0E-16 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 NA29_RS02305 fa47891810ecf68c0f94247d77a854e4 335 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 27 84 6.6E-8 T 09-03-2017 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 NA29_RS02305 fa47891810ecf68c0f94247d77a854e4 335 Hamap MF_00206 Lipoyl synthase [lipA]. 47 334 154.144 T 09-03-2017 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 NA29_RS05620 ddcc8beeb12a599c46b90c4d6ad9fc8a 234 SMART SM00448 1 112 1.3E-37 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS05620 ddcc8beeb12a599c46b90c4d6ad9fc8a 234 Gene3D G3DSA:3.40.50.2300 1 122 2.5E-39 T 09-03-2017 NA29_RS05620 ddcc8beeb12a599c46b90c4d6ad9fc8a 234 SMART SM00862 145 216 6.7E-26 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS05620 ddcc8beeb12a599c46b90c4d6ad9fc8a 234 SUPERFAMILY SSF52172 1 174 1.42E-40 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS05620 ddcc8beeb12a599c46b90c4d6ad9fc8a 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.3E-22 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS05620 ddcc8beeb12a599c46b90c4d6ad9fc8a 234 Gene3D G3DSA:1.10.10.10 123 217 1.4E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05620 ddcc8beeb12a599c46b90c4d6ad9fc8a 234 Pfam PF00072 Response regulator receiver domain 3 112 5.9E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS10010 b1ac9988c3b43d723ba28d1ba40fc9ae 341 Gene3D G3DSA:3.40.50.720 154 314 1.7E-57 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10010 b1ac9988c3b43d723ba28d1ba40fc9ae 341 SUPERFAMILY SSF51735 10 338 1.94E-93 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10010 b1ac9988c3b43d723ba28d1ba40fc9ae 341 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 14 333 2.6E-72 T 09-03-2017 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 NA29_RS10010 b1ac9988c3b43d723ba28d1ba40fc9ae 341 Gene3D G3DSA:3.30.1780.10 10 153 3.1E-42 T 09-03-2017 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 NA29_RS10010 b1ac9988c3b43d723ba28d1ba40fc9ae 341 PIRSF PIRSF001439 2 341 9.8E-89 T 09-03-2017 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 NA29_RS17155 7c4d56bb7d26dd4dbe2562e322311f23 315 Gene3D G3DSA:3.40.50.720 9 196 9.8E-17 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17155 7c4d56bb7d26dd4dbe2562e322311f23 315 SUPERFAMILY SSF51735 8 262 1.89E-26 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17155 7c4d56bb7d26dd4dbe2562e322311f23 315 Pfam PF05368 NmrA-like family 12 244 4.7E-18 T 09-03-2017 IPR008030 NmrA-like domain Reactome: R-HSA-70635 NA29_RS01420 7e718faa94d36624308cf6fb18a9e544 233 Pfam PF00005 ABC transporter 17 162 1.8E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS01420 7e718faa94d36624308cf6fb18a9e544 233 SUPERFAMILY SSF52540 2 218 3.52E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01420 7e718faa94d36624308cf6fb18a9e544 233 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 233 2.7E-102 T 09-03-2017 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE NA29_RS01420 7e718faa94d36624308cf6fb18a9e544 233 Gene3D G3DSA:3.40.50.300 1 218 2.1E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01420 7e718faa94d36624308cf6fb18a9e544 233 SMART SM00382 26 219 1.2E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS10585 879c0a8fd0360c8dd68b7ee21d4cc5e1 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS10585 879c0a8fd0360c8dd68b7ee21d4cc5e1 240 Gene3D G3DSA:3.40.50.300 2 236 6.7E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10585 879c0a8fd0360c8dd68b7ee21d4cc5e1 240 Pfam PF00005 ABC transporter 17 165 1.2E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS10585 879c0a8fd0360c8dd68b7ee21d4cc5e1 240 SUPERFAMILY SSF52540 1 235 3.96E-79 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10585 879c0a8fd0360c8dd68b7ee21d4cc5e1 240 SMART SM00382 26 213 7.4E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS10585 879c0a8fd0360c8dd68b7ee21d4cc5e1 240 PIRSF PIRSF039085 1 240 2.9E-117 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 NA29_RS14920 41c4a7635b764438867252e0ff498a72 395 Gene3D G3DSA:3.90.1150.10 284 394 2.2E-16 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS14920 41c4a7635b764438867252e0ff498a72 395 Gene3D G3DSA:3.40.640.10 55 283 1.3E-77 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS14920 41c4a7635b764438867252e0ff498a72 395 Pfam PF00155 Aminotransferase class I and II 42 392 2.2E-60 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS14920 41c4a7635b764438867252e0ff498a72 395 SUPERFAMILY SSF53383 18 395 1.2E-103 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS19395 dcf5dc2fe1bcb6297457ac9f65c5ceb1 324 SUPERFAMILY SSF50129 2 144 7.08E-41 T 09-03-2017 IPR011032 GroES-like NA29_RS19395 dcf5dc2fe1bcb6297457ac9f65c5ceb1 324 SMART SM00829 11 322 5.0E-42 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NA29_RS19395 dcf5dc2fe1bcb6297457ac9f65c5ceb1 324 Pfam PF00107 Zinc-binding dehydrogenase 151 257 2.3E-28 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NA29_RS19395 dcf5dc2fe1bcb6297457ac9f65c5ceb1 324 Gene3D G3DSA:3.40.50.720 146 256 3.3E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS19395 dcf5dc2fe1bcb6297457ac9f65c5ceb1 324 Gene3D G3DSA:3.90.180.10 2 145 7.2E-49 T 09-03-2017 IPR011032 GroES-like NA29_RS19395 dcf5dc2fe1bcb6297457ac9f65c5ceb1 324 SUPERFAMILY SSF51735 111 264 5.34E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS19395 dcf5dc2fe1bcb6297457ac9f65c5ceb1 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 93 1.6E-10 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 NA29_RS19395 dcf5dc2fe1bcb6297457ac9f65c5ceb1 324 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 09-03-2017 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 NA29_RS11325 8591d6903fc12c3c53cfd51fb3cf3151 421 Gene3D G3DSA:2.40.160.10 20 421 6.6E-50 T 09-03-2017 IPR023614 Porin domain NA29_RS11325 8591d6903fc12c3c53cfd51fb3cf3151 421 Pfam PF13609 Gram-negative porin 7 382 1.8E-33 T 09-03-2017 NA29_RS11325 8591d6903fc12c3c53cfd51fb3cf3151 421 SUPERFAMILY SSF56935 19 421 6.23E-40 T 09-03-2017 NA29_RS11325 8591d6903fc12c3c53cfd51fb3cf3151 421 PRINTS PR00184 Neisseria sp. porin signature 220 237 1.6E-14 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS11325 8591d6903fc12c3c53cfd51fb3cf3151 421 PRINTS PR00184 Neisseria sp. porin signature 69 94 1.6E-14 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS11325 8591d6903fc12c3c53cfd51fb3cf3151 421 PRINTS PR00184 Neisseria sp. porin signature 356 380 1.6E-14 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS11325 8591d6903fc12c3c53cfd51fb3cf3151 421 PRINTS PR00184 Neisseria sp. porin signature 106 125 1.6E-14 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS01790 541a90f2ce5759cd86ca07d64863b6ce 414 SMART SM00833 270 386 1.6E-37 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS01790 541a90f2ce5759cd86ca07d64863b6ce 414 Gene3D G3DSA:3.30.1220.10 259 386 2.2E-18 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS01790 541a90f2ce5759cd86ca07d64863b6ce 414 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 270 386 3.8E-25 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS01790 541a90f2ce5759cd86ca07d64863b6ce 414 Gene3D G3DSA:3.40.50.300 12 243 9.7E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01790 541a90f2ce5759cd86ca07d64863b6ce 414 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 15 224 3.7E-56 T 09-03-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain NA29_RS01790 541a90f2ce5759cd86ca07d64863b6ce 414 SUPERFAMILY SSF52540 10 317 1.5E-38 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06350 a39257c2f9331a37e89080be48d705d3 224 Gene3D G3DSA:1.10.10.10 22 98 5.9E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06350 a39257c2f9331a37e89080be48d705d3 224 SUPERFAMILY SSF46785 24 201 4.62E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04460 2ce19dfd8acb7aa3dc0a01fb89573ab8 399 Gene3D G3DSA:3.40.47.10 283 398 5.3E-65 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS04460 2ce19dfd8acb7aa3dc0a01fb89573ab8 399 Gene3D G3DSA:3.40.47.10 150 190 5.3E-65 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS04460 2ce19dfd8acb7aa3dc0a01fb89573ab8 399 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 09-03-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 NA29_RS04460 2ce19dfd8acb7aa3dc0a01fb89573ab8 399 Pfam PF00108 Thiolase, N-terminal domain 9 268 1.5E-72 T 09-03-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 NA29_RS04460 2ce19dfd8acb7aa3dc0a01fb89573ab8 399 PIRSF PIRSF000429 2 399 4.2E-126 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS04460 2ce19dfd8acb7aa3dc0a01fb89573ab8 399 SUPERFAMILY SSF53901 5 273 4.98E-72 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS04460 2ce19dfd8acb7aa3dc0a01fb89573ab8 399 ProSitePatterns PS00737 Thiolases signature 2. 345 361 - T 09-03-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 NA29_RS04460 2ce19dfd8acb7aa3dc0a01fb89573ab8 399 Gene3D G3DSA:3.40.47.10 7 130 1.9E-63 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS04460 2ce19dfd8acb7aa3dc0a01fb89573ab8 399 Gene3D G3DSA:3.40.47.10 191 282 1.9E-63 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS04460 2ce19dfd8acb7aa3dc0a01fb89573ab8 399 SUPERFAMILY SSF53901 277 398 5.08E-43 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 NA29_RS04460 2ce19dfd8acb7aa3dc0a01fb89573ab8 399 Pfam PF02803 Thiolase, C-terminal domain 276 398 4.4E-45 T 09-03-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 NA29_RS04460 2ce19dfd8acb7aa3dc0a01fb89573ab8 399 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 09-03-2017 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 NA29_RS04460 2ce19dfd8acb7aa3dc0a01fb89573ab8 399 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 397 1.4E-142 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 NA29_RS16220 7fc19fab4f38415d1012e2bd29164629 260 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS16220 7fc19fab4f38415d1012e2bd29164629 260 Pfam PF00005 ABC transporter 24 171 3.0E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS16220 7fc19fab4f38415d1012e2bd29164629 260 SMART SM00382 31 219 3.2E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS16220 7fc19fab4f38415d1012e2bd29164629 260 SUPERFAMILY SSF52540 6 233 3.73E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS16220 7fc19fab4f38415d1012e2bd29164629 260 Gene3D G3DSA:3.40.50.300 5 235 1.7E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS16180 52eb7cfc93a966a254fe66c02f0e9e19 737 Pfam PF07715 TonB-dependent Receptor Plug Domain 99 194 1.6E-11 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS16180 52eb7cfc93a966a254fe66c02f0e9e19 737 SUPERFAMILY SSF56935 56 737 3.66E-96 T 09-03-2017 NA29_RS16180 52eb7cfc93a966a254fe66c02f0e9e19 737 SMART SM00965 1 51 9.4E-7 T 09-03-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NA29_RS16180 52eb7cfc93a966a254fe66c02f0e9e19 737 Pfam PF00593 TonB dependent receptor 504 735 1.4E-26 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS16180 52eb7cfc93a966a254fe66c02f0e9e19 737 Gene3D G3DSA:2.170.130.10 54 212 5.3E-26 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS16180 52eb7cfc93a966a254fe66c02f0e9e19 737 Gene3D G3DSA:2.40.170.20 215 737 3.2E-97 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS16180 52eb7cfc93a966a254fe66c02f0e9e19 737 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 101 737 2.5E-98 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NA29_RS16180 52eb7cfc93a966a254fe66c02f0e9e19 737 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 720 737 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site NA29_RS10670 85df4dd1edc5a1e2a0738ea8a583c0ce 439 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 10 434 2.3E-203 T 09-03-2017 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 NA29_RS10670 85df4dd1edc5a1e2a0738ea8a583c0ce 439 SUPERFAMILY SSF51182 11 438 1.45E-177 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS10670 85df4dd1edc5a1e2a0738ea8a583c0ce 439 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 12 436 72.117 T 09-03-2017 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5 NA29_RS10670 85df4dd1edc5a1e2a0738ea8a583c0ce 439 Gene3D G3DSA:2.60.120.10 286 403 1.4E-66 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS10670 85df4dd1edc5a1e2a0738ea8a583c0ce 439 Gene3D G3DSA:2.60.120.10 200 225 1.4E-66 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS10670 85df4dd1edc5a1e2a0738ea8a583c0ce 439 Pfam PF04209 homogentisate 1,2-dioxygenase 13 434 1.7E-206 T 09-03-2017 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 NA29_RS22250 c4980f746c8f09c14466630d29151e9f 311 SUPERFAMILY SSF53613 4 297 3.12E-61 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS22250 c4980f746c8f09c14466630d29151e9f 311 Pfam PF00294 pfkB family carbohydrate kinase 36 294 2.5E-39 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB NA29_RS22250 c4980f746c8f09c14466630d29151e9f 311 Gene3D G3DSA:3.40.1190.20 3 304 7.4E-57 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS15945 8dea7b13d05dbd124ba0412ffad1e284 160 SUPERFAMILY SSF54637 7 141 2.62E-38 T 09-03-2017 IPR029069 HotDog domain NA29_RS15945 8dea7b13d05dbd124ba0412ffad1e284 160 Pfam PF03061 Thioesterase superfamily 23 104 2.9E-17 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 NA29_RS15945 8dea7b13d05dbd124ba0412ffad1e284 160 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 13 104 3.1E-27 T 09-03-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 NA29_RS15945 8dea7b13d05dbd124ba0412ffad1e284 160 Gene3D G3DSA:3.10.129.10 10 144 1.1E-46 T 09-03-2017 IPR029069 HotDog domain NA29_RS15945 8dea7b13d05dbd124ba0412ffad1e284 160 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 11 137 7.5E-45 T 09-03-2017 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 NA29_RS15945 8dea7b13d05dbd124ba0412ffad1e284 160 PIRSF PIRSF003230 4 148 2.7E-41 T 09-03-2017 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 NA29_RS04945 e35799842e73f84561a048740870ee2e 507 Pfam PF05683 Fumarase C-terminus 289 490 2.6E-78 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 NA29_RS04945 e35799842e73f84561a048740870ee2e 507 Pfam PF05681 Fumarate hydratase (Fumerase) 12 285 1.7E-102 T 09-03-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 NA29_RS04945 e35799842e73f84561a048740870ee2e 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 327 489 1.7E-47 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 NA29_RS04945 e35799842e73f84561a048740870ee2e 507 SUPERFAMILY SSF117457 319 488 6.02E-61 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 NA29_RS04945 e35799842e73f84561a048740870ee2e 507 Gene3D G3DSA:3.20.130.10 304 489 1.6E-70 T 09-03-2017 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 NA29_RS04945 e35799842e73f84561a048740870ee2e 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 13 285 2.3E-67 T 09-03-2017 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 NA29_RS04945 e35799842e73f84561a048740870ee2e 507 PIRSF PIRSF001394 1 507 3.6E-214 T 09-03-2017 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 NA29_RS15610 59215a2fa7d0f2e9208adf81c596e8f7 336 Gene3D G3DSA:3.40.190.10 114 244 2.2E-21 T 09-03-2017 NA29_RS15610 59215a2fa7d0f2e9208adf81c596e8f7 336 Pfam PF09084 NMT1/THI5 like 40 251 1.4E-26 T 09-03-2017 IPR015168 SsuA/THI5-like NA29_RS15610 59215a2fa7d0f2e9208adf81c596e8f7 336 SUPERFAMILY SSF53850 26 276 1.45E-47 T 09-03-2017 NA29_RS04260 626d620b714f28062db77aabf402b636 291 SUPERFAMILY SSF53697 108 275 2.45E-15 T 09-03-2017 NA29_RS04260 626d620b714f28062db77aabf402b636 291 SUPERFAMILY SSF46689 7 80 3.4E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS04260 626d620b714f28062db77aabf402b636 291 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 76 1.1E-9 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 NA29_RS04260 626d620b714f28062db77aabf402b636 291 Pfam PF01380 SIS domain 133 256 3.6E-14 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 NA29_RS04260 626d620b714f28062db77aabf402b636 291 Gene3D G3DSA:1.10.10.10 4 79 4.8E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04260 626d620b714f28062db77aabf402b636 291 Gene3D G3DSA:3.40.50.10490 107 275 7.6E-15 T 09-03-2017 NA29_RS10695 e6006cf5016e8f1331903ea32ae11439 493 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 2 490 57.03 T 09-03-2017 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 NA29_RS10695 e6006cf5016e8f1331903ea32ae11439 493 Gene3D G3DSA:3.40.309.10 259 452 7.0E-44 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS10695 e6006cf5016e8f1331903ea32ae11439 493 Pfam PF00171 Aldehyde dehydrogenase family 10 461 4.1E-120 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS10695 e6006cf5016e8f1331903ea32ae11439 493 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS10695 e6006cf5016e8f1331903ea32ae11439 493 Gene3D G3DSA:3.40.605.10 2 258 4.5E-73 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS10695 e6006cf5016e8f1331903ea32ae11439 493 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 4 490 4.1E-240 T 09-03-2017 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 NA29_RS10695 e6006cf5016e8f1331903ea32ae11439 493 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS10695 e6006cf5016e8f1331903ea32ae11439 493 SUPERFAMILY SSF53720 2 459 1.28E-124 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS24895 b87e7dca953f7128f80040527e1da27f 240 Hamap MF_00415 Flagellar L-ring protein [flgH]. 17 238 27.391 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NA29_RS24895 b87e7dca953f7128f80040527e1da27f 240 Pfam PF02107 Flagellar L-ring protein 61 239 2.6E-61 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NA29_RS24895 b87e7dca953f7128f80040527e1da27f 240 PRINTS PR01008 Flagellar L-ring protein signature 217 231 2.2E-31 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NA29_RS24895 b87e7dca953f7128f80040527e1da27f 240 PRINTS PR01008 Flagellar L-ring protein signature 180 196 2.2E-31 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NA29_RS24895 b87e7dca953f7128f80040527e1da27f 240 PRINTS PR01008 Flagellar L-ring protein signature 83 95 2.2E-31 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NA29_RS24895 b87e7dca953f7128f80040527e1da27f 240 PRINTS PR01008 Flagellar L-ring protein signature 201 215 2.2E-31 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NA29_RS24895 b87e7dca953f7128f80040527e1da27f 240 PRINTS PR01008 Flagellar L-ring protein signature 154 169 2.2E-31 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NA29_RS00165 26b9a2068d7c9b170184a4330b01541c 190 Pfam PF09351 Domain of unknown function (DUF1993) 4 175 5.9E-45 T 09-03-2017 IPR018531 Domain of unknown function DUF1993 NA29_RS00165 26b9a2068d7c9b170184a4330b01541c 190 Gene3D G3DSA:1.20.120.450 1 175 1.4E-54 T 09-03-2017 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase NA29_RS00165 26b9a2068d7c9b170184a4330b01541c 190 SUPERFAMILY SSF109854 2 181 2.2E-44 T 09-03-2017 NA29_RS01115 c8eaab386574461f5ecf3b2a290f75f4 183 Pfam PF00227 Proteasome subunit 5 174 7.2E-24 T 09-03-2017 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5687128|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-983168 NA29_RS01115 c8eaab386574461f5ecf3b2a290f75f4 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 40.675 T 09-03-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 NA29_RS01115 c8eaab386574461f5ecf3b2a290f75f4 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 177 3.1E-83 T 09-03-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 NA29_RS01115 c8eaab386574461f5ecf3b2a290f75f4 183 SUPERFAMILY SSF56235 3 176 5.5E-59 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS01115 c8eaab386574461f5ecf3b2a290f75f4 183 PIRSF PIRSF039093 1 180 1.5E-85 T 09-03-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 NA29_RS01115 c8eaab386574461f5ecf3b2a290f75f4 183 Gene3D G3DSA:3.60.20.10 7 177 1.4E-83 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 Gene3D G3DSA:2.40.37.10 211 353 5.8E-50 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 SUPERFAMILY SSF51419 9 231 4.65E-62 T 09-03-2017 IPR029066 PLP-binding barrel NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 Pfam PF00842 Alanine racemase, C-terminal domain 234 352 7.6E-35 T 09-03-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 SUPERFAMILY SSF50621 227 354 6.28E-43 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 Gene3D G3DSA:3.20.20.10 12 210 2.3E-65 T 09-03-2017 IPR029066 PLP-binding barrel NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 PRINTS PR00992 Alanine racemase signature 121 133 6.9E-68 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 PRINTS PR00992 Alanine racemase signature 190 217 6.9E-68 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 PRINTS PR00992 Alanine racemase signature 61 79 6.9E-68 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 PRINTS PR00992 Alanine racemase signature 248 263 6.9E-68 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 PRINTS PR00992 Alanine racemase signature 338 351 6.9E-68 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 PRINTS PR00992 Alanine racemase signature 286 303 6.9E-68 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 PRINTS PR00992 Alanine racemase signature 265 280 6.9E-68 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 PRINTS PR00992 Alanine racemase signature 155 166 6.9E-68 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 PRINTS PR00992 Alanine racemase signature 27 43 6.9E-68 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 TIGRFAM TIGR00492 alr: alanine racemase 4 354 4.9E-107 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 Pfam PF01168 Alanine racemase, N-terminal domain 9 217 1.1E-67 T 09-03-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 09-03-2017 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 SMART SM01005 232 356 7.5E-57 T 09-03-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS13345 01c0e06e29d774c48c62eb59ddc43865 356 Hamap MF_01201 Alanine racemase. 2 356 33.164 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS04640 e7cd5f98279955353de5f8f8bd1fd41f 439 Gene3D G3DSA:3.40.50.150 154 224 1.4E-30 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS04640 e7cd5f98279955353de5f8f8bd1fd41f 439 Gene3D G3DSA:3.40.50.150 265 412 1.4E-30 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS04640 e7cd5f98279955353de5f8f8bd1fd41f 439 Pfam PF02926 THUMP domain 40 159 1.8E-8 T 09-03-2017 IPR004114 THUMP domain GO:0003723 NA29_RS04640 e7cd5f98279955353de5f8f8bd1fd41f 439 SUPERFAMILY SSF53335 357 411 2.96E-38 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS04640 e7cd5f98279955353de5f8f8bd1fd41f 439 SUPERFAMILY SSF53335 153 227 2.96E-38 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS04640 e7cd5f98279955353de5f8f8bd1fd41f 439 SUPERFAMILY SSF53335 268 327 2.96E-38 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS04640 e7cd5f98279955353de5f8f8bd1fd41f 439 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 310 322 3.5E-5 T 09-03-2017 NA29_RS04640 e7cd5f98279955353de5f8f8bd1fd41f 439 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 203 217 3.5E-5 T 09-03-2017 NA29_RS04640 e7cd5f98279955353de5f8f8bd1fd41f 439 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 313 319 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NA29_RS04640 e7cd5f98279955353de5f8f8bd1fd41f 439 Pfam PF01170 Putative RNA methylase family UPF0020 168 325 5.6E-34 T 09-03-2017 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS04640 e7cd5f98279955353de5f8f8bd1fd41f 439 SMART SM00981 62 160 6.9E-20 T 09-03-2017 IPR004114 THUMP domain GO:0003723 NA29_RS19840 d7e6712af6668e4f000299d618588c7d 151 SUPERFAMILY SSF55729 1 137 2.57E-26 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS19840 d7e6712af6668e4f000299d618588c7d 151 Pfam PF00583 Acetyltransferase (GNAT) family 58 132 4.5E-12 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS19840 d7e6712af6668e4f000299d618588c7d 151 Gene3D G3DSA:3.40.630.30 4 132 1.3E-29 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS23475 de96e2a06d729a03ec2a3555de00c24e 208 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 200 2.4E-56 T 09-03-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 NA29_RS23475 de96e2a06d729a03ec2a3555de00c24e 208 Pfam PF01914 MarC family integral membrane protein 6 202 3.1E-57 T 09-03-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 NA29_RS06780 110fa3d2295e9063052c4c9fba668bd5 359 Pfam PF13478 XdhC Rossmann domain 195 336 6.6E-36 T 09-03-2017 IPR027051 XdhC Rossmann domain NA29_RS06780 110fa3d2295e9063052c4c9fba668bd5 359 Pfam PF02625 XdhC and CoxI family 14 74 3.4E-16 T 09-03-2017 IPR003777 XdhC- CoxI NA29_RS06780 110fa3d2295e9063052c4c9fba668bd5 359 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 19 337 1.1E-98 T 09-03-2017 IPR014308 Xanthine dehydrogenase accessory protein XdhC NA29_RS12685 231e8577382a6a03000c8cec61c89926 350 Gene3D G3DSA:3.30.1370.60 72 276 5.6E-73 T 09-03-2017 NA29_RS12685 231e8577382a6a03000c8cec61c89926 350 SUPERFAMILY SSF89733 1 348 1.44E-98 T 09-03-2017 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS12685 231e8577382a6a03000c8cec61c89926 350 Pfam PF02615 Malate/L-lactate dehydrogenase 5 335 2.8E-102 T 09-03-2017 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS12685 231e8577382a6a03000c8cec61c89926 350 Gene3D G3DSA:1.10.1530.10 1 71 2.2E-19 T 09-03-2017 NA29_RS13600 85154b0d70b11433ff2c6b9250e56139 293 Gene3D G3DSA:1.10.1040.10 164 289 2.7E-40 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS13600 85154b0d70b11433ff2c6b9250e56139 293 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 284 3.3E-38 T 09-03-2017 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 NA29_RS13600 85154b0d70b11433ff2c6b9250e56139 293 PIRSF PIRSF000103 1 292 4.4E-73 T 09-03-2017 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 NA29_RS13600 85154b0d70b11433ff2c6b9250e56139 293 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 161 1.9E-50 T 09-03-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 NA29_RS13600 85154b0d70b11433ff2c6b9250e56139 293 Gene3D G3DSA:3.40.50.720 2 162 5.5E-56 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13600 85154b0d70b11433ff2c6b9250e56139 293 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 09-03-2017 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 NA29_RS13600 85154b0d70b11433ff2c6b9250e56139 293 SUPERFAMILY SSF51735 3 162 9.15E-47 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS13600 85154b0d70b11433ff2c6b9250e56139 293 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 292 3.5E-124 T 09-03-2017 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 NA29_RS13600 85154b0d70b11433ff2c6b9250e56139 293 SUPERFAMILY SSF48179 162 290 1.7E-36 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS15920 ff8cff35747ba92f7013bd525e2cdc43 220 Pfam PF00156 Phosphoribosyl transferase domain 6 201 9.6E-25 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 NA29_RS15920 ff8cff35747ba92f7013bd525e2cdc43 220 Gene3D G3DSA:3.40.50.2020 5 211 8.1E-32 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS15920 ff8cff35747ba92f7013bd525e2cdc43 220 SUPERFAMILY SSF53271 7 214 1.13E-43 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS12505 0b1733c887315392e9e001b3fa2c4ed5 297 Pfam PF04972 BON domain 214 278 1.1E-9 T 09-03-2017 IPR007055 BON domain NA29_RS05755 7da01bf80888be102a98eb62f2ad8d53 397 SUPERFAMILY SSF56645 7 243 6.02E-79 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 NA29_RS05755 7da01bf80888be102a98eb62f2ad8d53 397 Gene3D G3DSA:1.10.540.10 5 134 3.9E-42 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS05755 7da01bf80888be102a98eb62f2ad8d53 397 Gene3D G3DSA:1.20.140.10 231 392 3.5E-44 T 09-03-2017 NA29_RS05755 7da01bf80888be102a98eb62f2ad8d53 397 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 349 368 - T 09-03-2017 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 NA29_RS05755 7da01bf80888be102a98eb62f2ad8d53 397 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 389 2.1E-27 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS05755 7da01bf80888be102a98eb62f2ad8d53 397 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 132 4.3E-34 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 NA29_RS05755 7da01bf80888be102a98eb62f2ad8d53 397 SUPERFAMILY SSF47203 246 394 7.25E-43 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 NA29_RS05755 7da01bf80888be102a98eb62f2ad8d53 397 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 231 6.8E-22 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 NA29_RS05755 7da01bf80888be102a98eb62f2ad8d53 397 Gene3D G3DSA:2.40.110.10 135 230 8.3E-33 T 09-03-2017 NA29_RS07065 e3baa193d91969f6d1c3c6ec95f6eecc 275 Pfam PF00753 Metallo-beta-lactamase superfamily 30 186 2.1E-16 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS07065 e3baa193d91969f6d1c3c6ec95f6eecc 275 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 187 274 7.7E-26 T 09-03-2017 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 NA29_RS07065 e3baa193d91969f6d1c3c6ec95f6eecc 275 PIRSF PIRSF005457 11 274 6.9E-100 T 09-03-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 NA29_RS07065 e3baa193d91969f6d1c3c6ec95f6eecc 275 SMART SM00849 26 186 4.2E-31 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS07065 e3baa193d91969f6d1c3c6ec95f6eecc 275 Gene3D G3DSA:3.60.15.10 18 274 5.5E-87 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS07065 e3baa193d91969f6d1c3c6ec95f6eecc 275 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 16 274 42.689 T 09-03-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 NA29_RS07065 e3baa193d91969f6d1c3c6ec95f6eecc 275 SUPERFAMILY SSF56281 17 274 5.5E-70 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS07065 e3baa193d91969f6d1c3c6ec95f6eecc 275 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 19 274 2.9E-97 T 09-03-2017 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 NA29_RS06925 273e62adb694efc10679f5991e673818 499 Gene3D G3DSA:3.30.450.40 319 440 5.9E-5 T 09-03-2017 IPR029016 GAF domain-like NA29_RS06925 273e62adb694efc10679f5991e673818 499 SUPERFAMILY SSF109604 11 278 5.34E-48 T 09-03-2017 NA29_RS06925 273e62adb694efc10679f5991e673818 499 Gene3D G3DSA:1.10.3150.10 11 280 1.1E-65 T 09-03-2017 IPR013976 Metal-dependent hydrolase HDOD NA29_RS06925 273e62adb694efc10679f5991e673818 499 Pfam PF08668 HDOD domain 23 212 1.4E-37 T 09-03-2017 IPR013976 Metal-dependent hydrolase HDOD NA29_RS06925 273e62adb694efc10679f5991e673818 499 SUPERFAMILY SSF55781 330 444 8.34E-10 T 09-03-2017 IPR029016 GAF domain-like NA29_RS07960 d1e33a2c5c09625394665ec38563fdc6 638 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 6 616 2.0E-263 T 09-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 NA29_RS07960 d1e33a2c5c09625394665ec38563fdc6 638 SUPERFAMILY SSF52922 486 618 2.36E-31 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NA29_RS07960 d1e33a2c5c09625394665ec38563fdc6 638 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 277 2.1E-122 T 09-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 NA29_RS07960 d1e33a2c5c09625394665ec38563fdc6 638 Pfam PF02780 Transketolase, C-terminal domain 501 610 4.1E-26 T 09-03-2017 IPR033248 Transketolase, C-terminal domain NA29_RS07960 d1e33a2c5c09625394665ec38563fdc6 638 Gene3D G3DSA:3.40.50.970 328 489 4.1E-38 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS07960 d1e33a2c5c09625394665ec38563fdc6 638 Gene3D G3DSA:3.40.50.970 237 327 1.3E-78 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS07960 d1e33a2c5c09625394665ec38563fdc6 638 Gene3D G3DSA:3.40.50.970 20 196 1.3E-78 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS07960 d1e33a2c5c09625394665ec38563fdc6 638 ProSitePatterns PS00801 Transketolase signature 1. 30 49 - T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 NA29_RS07960 d1e33a2c5c09625394665ec38563fdc6 638 SUPERFAMILY SSF52518 2 343 1.36E-82 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS07960 d1e33a2c5c09625394665ec38563fdc6 638 Pfam PF02779 Transketolase, pyrimidine binding domain 312 473 3.8E-40 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain NA29_RS07960 d1e33a2c5c09625394665ec38563fdc6 638 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 4 619 46.618 T 09-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 NA29_RS07960 d1e33a2c5c09625394665ec38563fdc6 638 SMART SM00861 313 477 8.8E-72 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain NA29_RS07960 d1e33a2c5c09625394665ec38563fdc6 638 Gene3D G3DSA:3.40.50.920 490 616 1.8E-33 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NA29_RS07960 d1e33a2c5c09625394665ec38563fdc6 638 ProSitePatterns PS00802 Transketolase signature 2. 419 435 - T 09-03-2017 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 NA29_RS07960 d1e33a2c5c09625394665ec38563fdc6 638 SUPERFAMILY SSF52518 290 472 4.58E-63 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS09835 f9c5e5cb129d2d6067590757c327c111 343 SMART SM00858 49 109 3.4E-9 T 09-03-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 NA29_RS09835 f9c5e5cb129d2d6067590757c327c111 343 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 11 339 4.1E-44 T 09-03-2017 IPR017592 Pilus assembly, Flp-type CpaB NA29_RS09835 f9c5e5cb129d2d6067590757c327c111 343 Pfam PF08666 SAF domain 52 108 2.2E-6 T 09-03-2017 IPR013974 SAF domain Reactome: R-HSA-4085001 NA29_RS09835 f9c5e5cb129d2d6067590757c327c111 343 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 111 253 1.2E-25 T 09-03-2017 IPR031571 Flp pilus assembly protein RcpC/CpaB domain NA29_RS22605 2cd45da059ac1f304b27be4a593ea1ee 124 Gene3D G3DSA:2.60.40.1470 5 124 1.6E-47 T 09-03-2017 IPR007474 ApaG domain NA29_RS22605 2cd45da059ac1f304b27be4a593ea1ee 124 Hamap MF_00791 Protein ApaG [apaG]. 1 124 32.0 T 09-03-2017 IPR023065 Uncharacterised protein family ApaG NA29_RS22605 2cd45da059ac1f304b27be4a593ea1ee 124 Pfam PF04379 Protein of unknown function (DUF525) 16 101 9.6E-35 T 09-03-2017 IPR007474 ApaG domain NA29_RS22605 2cd45da059ac1f304b27be4a593ea1ee 124 SUPERFAMILY SSF110069 5 124 1.31E-48 T 09-03-2017 IPR007474 ApaG domain NA29_RS02550 672676a0738e8c15132b6963b0c0286f 286 SUPERFAMILY SSF81452 8 286 1.05E-79 T 09-03-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02550 672676a0738e8c15132b6963b0c0286f 286 Gene3D G3DSA:1.10.287.70 6 72 7.2E-13 T 09-03-2017 NA29_RS02550 672676a0738e8c15132b6963b0c0286f 286 Pfam PF00510 Cytochrome c oxidase subunit III 11 285 4.8E-58 T 09-03-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02550 672676a0738e8c15132b6963b0c0286f 286 Gene3D G3DSA:1.20.120.80 81 286 1.1E-65 T 09-03-2017 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS00815 9b9f9b1e19c9b18756a3b98edc969ae7 202 Gene3D G3DSA:1.10.10.60 147 192 4.5E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS00815 9b9f9b1e19c9b18756a3b98edc969ae7 202 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 148 190 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS00815 9b9f9b1e19c9b18756a3b98edc969ae7 202 Pfam PF12833 Helix-turn-helix domain 118 191 4.2E-14 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS00815 9b9f9b1e19c9b18756a3b98edc969ae7 202 SUPERFAMILY SSF46689 147 193 2.82E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS00815 9b9f9b1e19c9b18756a3b98edc969ae7 202 SMART SM00342 111 194 6.3E-15 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS24735 d9a265904e9cc941c3e298dd5539cc51 277 SUPERFAMILY SSF52540 24 250 2.1E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24735 d9a265904e9cc941c3e298dd5539cc51 277 Pfam PF00005 ABC transporter 44 183 1.0E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS24735 d9a265904e9cc941c3e298dd5539cc51 277 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS24735 d9a265904e9cc941c3e298dd5539cc51 277 Gene3D G3DSA:3.40.50.300 18 230 3.0E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24735 d9a265904e9cc941c3e298dd5539cc51 277 SMART SM00382 53 232 7.2E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS09260 cb29d196611bb6060563ec9c0e843277 435 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 423 1.8E-135 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 NA29_RS09260 cb29d196611bb6060563ec9c0e843277 435 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 NA29_RS09260 cb29d196611bb6060563ec9c0e843277 435 SUPERFAMILY SSF53383 5 423 1.39E-122 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS09260 cb29d196611bb6060563ec9c0e843277 435 Gene3D G3DSA:3.40.640.10 5 287 2.5E-112 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS09260 cb29d196611bb6060563ec9c0e843277 435 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 5 422 3.4E-177 T 09-03-2017 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 NA29_RS09260 cb29d196611bb6060563ec9c0e843277 435 PIRSF PIRSF001434 1 426 3.9E-132 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 NA29_RS09260 cb29d196611bb6060563ec9c0e843277 435 Gene3D G3DSA:3.90.1150.10 289 426 3.1E-50 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS10475 98163bac60379871ec075c163bb40df6 331 Gene3D G3DSA:3.40.50.720 140 297 4.6E-65 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10475 98163bac60379871ec075c163bb40df6 331 Pfam PF16884 N-terminal domain of oxidoreductase 5 111 2.4E-41 T 09-03-2017 NA29_RS10475 98163bac60379871ec075c163bb40df6 331 Pfam PF00107 Zinc-binding dehydrogenase 157 288 1.1E-20 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 NA29_RS10475 98163bac60379871ec075c163bb40df6 331 Gene3D G3DSA:3.90.180.10 1 139 3.0E-54 T 09-03-2017 IPR011032 GroES-like NA29_RS10475 98163bac60379871ec075c163bb40df6 331 SMART SM00829 17 328 1.9E-6 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 NA29_RS10475 98163bac60379871ec075c163bb40df6 331 SUPERFAMILY SSF50129 283 329 9.42E-5 T 09-03-2017 IPR011032 GroES-like NA29_RS10475 98163bac60379871ec075c163bb40df6 331 SUPERFAMILY SSF50129 1 137 3.86E-41 T 09-03-2017 IPR011032 GroES-like NA29_RS10475 98163bac60379871ec075c163bb40df6 331 SUPERFAMILY SSF51735 122 295 3.34E-46 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS02970 52c524ffec9557b8ecef665d5665c87b 484 Gene3D G3DSA:3.40.605.10 16 270 3.0E-72 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS02970 52c524ffec9557b8ecef665d5665c87b 484 Pfam PF00171 Aldehyde dehydrogenase family 26 477 1.4E-141 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS02970 52c524ffec9557b8ecef665d5665c87b 484 SUPERFAMILY SSF53720 14 482 2.49E-137 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS02970 52c524ffec9557b8ecef665d5665c87b 484 TIGRFAM TIGR03250 PhnAcAld_DH: putative phosphonoacetaldehyde dehydrogenase 11 482 7.1E-271 T 09-03-2017 IPR017656 Putative phosphonoacetaldehyde dehydrogenase NA29_RS02970 52c524ffec9557b8ecef665d5665c87b 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS02970 52c524ffec9557b8ecef665d5665c87b 484 Gene3D G3DSA:3.40.309.10 271 453 4.6E-59 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS02970 52c524ffec9557b8ecef665d5665c87b 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS03390 8364f6de2cdc8d2f0471bbc07b52b3eb 296 SUPERFAMILY SSF46785 1 111 4.77E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03390 8364f6de2cdc8d2f0471bbc07b52b3eb 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.4E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03390 8364f6de2cdc8d2f0471bbc07b52b3eb 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.4E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03390 8364f6de2cdc8d2f0471bbc07b52b3eb 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.4E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03390 8364f6de2cdc8d2f0471bbc07b52b3eb 296 Gene3D G3DSA:3.40.190.10 197 248 1.1E-9 T 09-03-2017 NA29_RS03390 8364f6de2cdc8d2f0471bbc07b52b3eb 296 Gene3D G3DSA:3.40.190.10 88 196 1.6E-14 T 09-03-2017 NA29_RS03390 8364f6de2cdc8d2f0471bbc07b52b3eb 296 Pfam PF03466 LysR substrate binding domain 92 286 4.3E-24 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS03390 8364f6de2cdc8d2f0471bbc07b52b3eb 296 SUPERFAMILY SSF53850 93 290 1.37E-23 T 09-03-2017 NA29_RS03390 8364f6de2cdc8d2f0471bbc07b52b3eb 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.5E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03390 8364f6de2cdc8d2f0471bbc07b52b3eb 296 Gene3D G3DSA:1.10.10.10 1 87 1.5E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00495 581392f9cc0a9ca724fbbd76190714f0 228 SMART SM00260 72 220 1.2E-8 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS00495 581392f9cc0a9ca724fbbd76190714f0 228 Pfam PF01584 CheW-like domain 77 219 2.9E-19 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS00495 581392f9cc0a9ca724fbbd76190714f0 228 SUPERFAMILY SSF50341 76 219 3.79E-20 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS10915 c6f6226840db2bcd7aaf0794890c64f2 262 Gene3D G3DSA:3.40.50.300 4 240 9.5E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10915 c6f6226840db2bcd7aaf0794890c64f2 262 Pfam PF00005 ABC transporter 24 167 3.7E-24 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS10915 c6f6226840db2bcd7aaf0794890c64f2 262 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS10915 c6f6226840db2bcd7aaf0794890c64f2 262 SUPERFAMILY SSF52540 5 233 2.1E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10915 c6f6226840db2bcd7aaf0794890c64f2 262 SMART SM00382 26 247 4.4E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS08400 35b6c2f8643342503753cbf3bf0cc116 697 Pfam PF03958 Bacterial type II/III secretion system short domain 266 324 1.0E-8 T 09-03-2017 IPR005644 NolW-like NA29_RS08400 35b6c2f8643342503753cbf3bf0cc116 697 Pfam PF00263 Bacterial type II and III secretion system protein 393 556 6.0E-41 T 09-03-2017 IPR004846 Type II/III secretion system GO:0009306 NA29_RS08400 35b6c2f8643342503753cbf3bf0cc116 697 Gene3D G3DSA:1.25.40.10 22 164 2.6E-9 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS08400 35b6c2f8643342503753cbf3bf0cc116 697 SUPERFAMILY SSF48452 24 162 1.06E-7 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS08400 35b6c2f8643342503753cbf3bf0cc116 697 SMART SM00965 202 253 1.4E-5 T 09-03-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NA29_RS08400 35b6c2f8643342503753cbf3bf0cc116 697 PRINTS PR00811 Bacterial general secretion pathway protein D signature 421 431 2.1E-10 T 09-03-2017 IPR001775 GspD/PilQ family NA29_RS08400 35b6c2f8643342503753cbf3bf0cc116 697 PRINTS PR00811 Bacterial general secretion pathway protein D signature 326 336 2.1E-10 T 09-03-2017 IPR001775 GspD/PilQ family NA29_RS08400 35b6c2f8643342503753cbf3bf0cc116 697 PRINTS PR00811 Bacterial general secretion pathway protein D signature 543 557 2.1E-10 T 09-03-2017 IPR001775 GspD/PilQ family NA29_RS08400 35b6c2f8643342503753cbf3bf0cc116 697 PRINTS PR00811 Bacterial general secretion pathway protein D signature 520 538 2.1E-10 T 09-03-2017 IPR001775 GspD/PilQ family NA29_RS08400 35b6c2f8643342503753cbf3bf0cc116 697 PRINTS PR00811 Bacterial general secretion pathway protein D signature 386 410 2.1E-10 T 09-03-2017 IPR001775 GspD/PilQ family NA29_RS24510 440dc819b20d367704ccf234a5054405 437 SUPERFAMILY SSF51905 160 293 5.44E-29 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS24510 440dc819b20d367704ccf234a5054405 437 Gene3D G3DSA:3.90.760.10 370 436 2.9E-19 T 09-03-2017 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 NA29_RS24510 440dc819b20d367704ccf234a5054405 437 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 43 160 1.2E-11 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS24510 440dc819b20d367704ccf234a5054405 437 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 370 436 9.1E-19 T 09-03-2017 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 NA29_RS24510 440dc819b20d367704ccf234a5054405 437 Gene3D G3DSA:3.50.50.60 294 366 4.6E-40 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS24510 440dc819b20d367704ccf234a5054405 437 Gene3D G3DSA:3.50.50.60 41 157 4.6E-40 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS24510 440dc819b20d367704ccf234a5054405 437 Gene3D G3DSA:3.50.50.60 161 293 8.0E-41 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS24510 440dc819b20d367704ccf234a5054405 437 SUPERFAMILY SSF51905 288 365 3.95E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS24510 440dc819b20d367704ccf234a5054405 437 SUPERFAMILY SSF51905 43 149 3.95E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS24510 440dc819b20d367704ccf234a5054405 437 SUPERFAMILY SSF55424 369 436 3.57E-16 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 NA29_RS03615 d24e188d2bde18dc7f4c97b95957dea8 442 Gene3D G3DSA:1.20.1250.20 12 222 1.6E-23 T 09-03-2017 NA29_RS03615 d24e188d2bde18dc7f4c97b95957dea8 442 Gene3D G3DSA:1.20.1250.20 229 420 6.1E-27 T 09-03-2017 NA29_RS03615 d24e188d2bde18dc7f4c97b95957dea8 442 SUPERFAMILY SSF103473 8 425 7.59E-70 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS03615 d24e188d2bde18dc7f4c97b95957dea8 442 Pfam PF07690 Major Facilitator Superfamily 272 423 2.9E-13 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS03615 d24e188d2bde18dc7f4c97b95957dea8 442 Pfam PF00083 Sugar (and other) transporter 16 213 3.4E-20 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS03615 d24e188d2bde18dc7f4c97b95957dea8 442 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS21840 aa8c4a3dab02737ab06088be1f553990 412 SUPERFAMILY SSF50182 181 248 7.85E-12 T 09-03-2017 IPR010920 LSM domain NA29_RS21840 aa8c4a3dab02737ab06088be1f553990 412 Gene3D G3DSA:2.30.30.60 198 248 4.3E-9 T 09-03-2017 NA29_RS21840 aa8c4a3dab02737ab06088be1f553990 412 Pfam PF00924 Mechanosensitive ion channel 141 393 1.3E-46 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 NA29_RS07865 0986675829dc4d3d74ab03bd7fb2439a 176 Gene3D G3DSA:3.90.79.10 39 160 1.4E-23 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS07865 0986675829dc4d3d74ab03bd7fb2439a 176 Pfam PF00293 NUDIX domain 44 145 2.1E-13 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 NA29_RS07865 0986675829dc4d3d74ab03bd7fb2439a 176 SUPERFAMILY SSF55811 6 163 2.03E-29 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS07865 0986675829dc4d3d74ab03bd7fb2439a 176 ProSitePatterns PS00893 Nudix box signature. 72 93 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 NA29_RS02220 b72c41ce6fad5dc9d4a0d58f6fe81e57 355 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 164 308 1.8E-23 T 09-03-2017 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 NA29_RS02220 b72c41ce6fad5dc9d4a0d58f6fe81e57 355 Hamap MF_01274 Type III pantothenate kinase [coaX]. 21 328 18.581 T 09-03-2017 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 NA29_RS02220 b72c41ce6fad5dc9d4a0d58f6fe81e57 355 SUPERFAMILY SSF53067 196 323 6.73E-27 T 09-03-2017 NA29_RS02220 b72c41ce6fad5dc9d4a0d58f6fe81e57 355 Gene3D G3DSA:3.30.420.40 166 329 1.1E-38 T 09-03-2017 NA29_RS02220 b72c41ce6fad5dc9d4a0d58f6fe81e57 355 Pfam PF03309 Type III pantothenate kinase 22 279 1.3E-50 T 09-03-2017 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 NA29_RS02220 b72c41ce6fad5dc9d4a0d58f6fe81e57 355 SUPERFAMILY SSF53067 119 192 3.24E-11 T 09-03-2017 NA29_RS00425 3aa7de20323af2e7ce2ff875c4508e12 303 Pfam PF03466 LysR substrate binding domain 93 298 7.5E-41 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS00425 3aa7de20323af2e7ce2ff875c4508e12 303 SUPERFAMILY SSF53850 94 299 4.5E-40 T 09-03-2017 NA29_RS00425 3aa7de20323af2e7ce2ff875c4508e12 303 Gene3D G3DSA:3.40.190.10 94 168 9.7E-7 T 09-03-2017 NA29_RS00425 3aa7de20323af2e7ce2ff875c4508e12 303 Gene3D G3DSA:3.40.190.10 169 265 7.6E-20 T 09-03-2017 NA29_RS00425 3aa7de20323af2e7ce2ff875c4508e12 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 1.0E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00425 3aa7de20323af2e7ce2ff875c4508e12 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 3.1E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00425 3aa7de20323af2e7ce2ff875c4508e12 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 3.1E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00425 3aa7de20323af2e7ce2ff875c4508e12 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 3.1E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS00425 3aa7de20323af2e7ce2ff875c4508e12 303 SUPERFAMILY SSF46785 9 115 3.06E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00425 3aa7de20323af2e7ce2ff875c4508e12 303 Gene3D G3DSA:1.10.10.10 11 90 5.8E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06960 f90efeb33cfe0526f0af7f69c4c33411 473 Pfam PF00271 Helicase conserved C-terminal domain 251 348 4.0E-25 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS06960 f90efeb33cfe0526f0af7f69c4c33411 473 Gene3D G3DSA:3.40.50.300 6 222 1.4E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06960 f90efeb33cfe0526f0af7f69c4c33411 473 Gene3D G3DSA:3.40.50.300 227 382 2.3E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06960 f90efeb33cfe0526f0af7f69c4c33411 473 Pfam PF00270 DEAD/DEAH box helicase 40 204 7.3E-47 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NA29_RS06960 f90efeb33cfe0526f0af7f69c4c33411 473 Pfam PF03880 DbpA RNA binding domain 399 469 1.2E-22 T 09-03-2017 IPR005580 DbpA, RNA-binding domain NA29_RS06960 f90efeb33cfe0526f0af7f69c4c33411 473 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 164 172 - T 09-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site NA29_RS06960 f90efeb33cfe0526f0af7f69c4c33411 473 SUPERFAMILY SSF52540 85 363 4.28E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06960 f90efeb33cfe0526f0af7f69c4c33411 473 SMART SM00490 268 349 7.9E-27 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS06960 f90efeb33cfe0526f0af7f69c4c33411 473 SMART SM00487 35 232 4.9E-57 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain NA29_RS18215 b39793af541658d9d7fe7d4e43a9a3d2 498 Gene3D G3DSA:3.40.309.10 269 458 1.2E-70 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS18215 b39793af541658d9d7fe7d4e43a9a3d2 498 Gene3D G3DSA:3.40.605.10 13 268 1.8E-87 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS18215 b39793af541658d9d7fe7d4e43a9a3d2 498 SUPERFAMILY SSF53720 13 487 2.09E-163 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS18215 b39793af541658d9d7fe7d4e43a9a3d2 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS18215 b39793af541658d9d7fe7d4e43a9a3d2 498 Pfam PF00171 Aldehyde dehydrogenase family 20 482 1.8E-173 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS18215 b39793af541658d9d7fe7d4e43a9a3d2 498 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS18305 f532c0b28753c24db45494d8ecfc4d0d 456 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 17 454 1.1E-124 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 NA29_RS18305 f532c0b28753c24db45494d8ecfc4d0d 456 Pfam PF02447 GntP family permease 16 452 3.0E-133 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 NA29_RS18305 f532c0b28753c24db45494d8ecfc4d0d 456 PIRSF PIRSF002746 10 456 3.1E-134 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 NA29_RS05150 c91533908e8e7ed1aed08a59a8953b13 596 Pfam PF16930 Putative porin 45 596 5.9E-199 T 09-03-2017 IPR032638 Putative bacterial porin NA29_RS19970 054be4b4bf73549049894f31dcb7ad66 104 Gene3D G3DSA:3.30.1390.10 6 104 6.4E-44 T 09-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NA29_RS19970 054be4b4bf73549049894f31dcb7ad66 104 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 21 99 2.0E-35 T 09-03-2017 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 NA29_RS19970 054be4b4bf73549049894f31dcb7ad66 104 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 2 99 28.952 T 09-03-2017 IPR022935 ATP-dependent Clp protease adaptor protein ClpS NA29_RS19970 054be4b4bf73549049894f31dcb7ad66 104 SUPERFAMILY SSF54736 19 103 1.78E-33 T 09-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like NA29_RS04815 0968eb3d56cbb571e9e20bc5e61d7ee1 457 Gene3D G3DSA:1.20.200.10 121 390 5.6E-89 T 09-03-2017 NA29_RS04815 0968eb3d56cbb571e9e20bc5e61d7ee1 457 PRINTS PR00149 Fumarate lyase superfamily signature 118 136 4.9E-18 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS04815 0968eb3d56cbb571e9e20bc5e61d7ee1 457 PRINTS PR00149 Fumarate lyase superfamily signature 164 182 4.9E-18 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS04815 0968eb3d56cbb571e9e20bc5e61d7ee1 457 PRINTS PR00149 Fumarate lyase superfamily signature 253 280 4.9E-18 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS04815 0968eb3d56cbb571e9e20bc5e61d7ee1 457 PRINTS PR00149 Fumarate lyase superfamily signature 296 312 4.9E-18 T 09-03-2017 IPR000362 Fumarate lyase family NA29_RS04815 0968eb3d56cbb571e9e20bc5e61d7ee1 457 Gene3D G3DSA:1.10.40.30 391 447 2.7E-32 T 09-03-2017 NA29_RS04815 0968eb3d56cbb571e9e20bc5e61d7ee1 457 Gene3D G3DSA:1.10.275.10 4 120 3.3E-46 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal NA29_RS04815 0968eb3d56cbb571e9e20bc5e61d7ee1 457 SUPERFAMILY SSF48557 3 449 2.83E-107 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 NA29_RS04815 0968eb3d56cbb571e9e20bc5e61d7ee1 457 Pfam PF08328 Adenylosuccinate lyase C-terminal 333 447 2.2E-52 T 09-03-2017 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 NA29_RS04815 0968eb3d56cbb571e9e20bc5e61d7ee1 457 Pfam PF00206 Lyase 16 314 3.1E-59 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal NA29_RS04815 0968eb3d56cbb571e9e20bc5e61d7ee1 457 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 14 457 1.2E-128 T 09-03-2017 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 NA29_RS04815 0968eb3d56cbb571e9e20bc5e61d7ee1 457 ProSitePatterns PS00163 Fumarate lyases signature. 296 305 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 NA29_RS14385 27c2dec57c093084de6885b0f01a8c1a 78 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 27.79 T 09-03-2017 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 NA29_RS14385 27c2dec57c093084de6885b0f01a8c1a 78 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 8 65 1.1E-28 T 09-03-2017 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 NA29_RS14385 27c2dec57c093084de6885b0f01a8c1a 78 SUPERFAMILY SSF50182 8 71 1.47E-23 T 09-03-2017 IPR010920 LSM domain NA29_RS14385 27c2dec57c093084de6885b0f01a8c1a 78 Gene3D G3DSA:2.30.30.100 2 71 3.5E-37 T 09-03-2017 NA29_RS05130 506ef0f8791e6d685d55d574df8f9595 561 Gene3D G3DSA:3.10.20.310 64 142 7.4E-10 T 09-03-2017 NA29_RS05130 506ef0f8791e6d685d55d574df8f9595 561 Pfam PF08479 POTRA domain, ShlB-type 69 142 2.0E-14 T 09-03-2017 IPR013686 Polypeptide-transport-associated, ShlB-type NA29_RS05130 506ef0f8791e6d685d55d574df8f9595 561 Gene3D G3DSA:2.40.160.50 182 560 7.9E-54 T 09-03-2017 NA29_RS01780 185c799f95838d983d0562f8df08face 329 Pfam PF05425 Copper resistance protein D 217 319 8.9E-15 T 09-03-2017 IPR008457 Copper resistance protein D GO:0016021 NA29_RS03590 e676658f2c2c91a9bc2c3a1fb49c8bad 100 SUPERFAMILY SSF50249 3 90 8.57E-13 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS03590 e676658f2c2c91a9bc2c3a1fb49c8bad 100 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 7 30 2.9E-6 T 09-03-2017 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal NA29_RS14955 3845beb5bb82c77388d1420c31d7976b 230 Gene3D G3DSA:1.20.1050.10 83 200 1.9E-54 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS14955 3845beb5bb82c77388d1420c31d7976b 230 SUPERFAMILY SSF52833 3 83 3.19E-21 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS14955 3845beb5bb82c77388d1420c31d7976b 230 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 79 8.5E-12 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS14955 3845beb5bb82c77388d1420c31d7976b 230 SUPERFAMILY SSF47616 77 203 6.96E-39 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS14955 3845beb5bb82c77388d1420c31d7976b 230 Pfam PF00043 Glutathione S-transferase, C-terminal domain 110 196 1.6E-12 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal NA29_RS14955 3845beb5bb82c77388d1420c31d7976b 230 Gene3D G3DSA:3.40.30.10 2 82 2.2E-27 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS06305 c83735613b0b048f966c2e90db116251 252 Gene3D G3DSA:3.40.50.720 2 251 1.6E-73 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS06305 c83735613b0b048f966c2e90db116251 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 1.5E-50 T 09-03-2017 NA29_RS06305 c83735613b0b048f966c2e90db116251 252 SUPERFAMILY SSF51735 3 252 1.93E-69 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS06305 c83735613b0b048f966c2e90db116251 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 4.3E-31 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS06305 c83735613b0b048f966c2e90db116251 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 4.3E-31 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS06305 c83735613b0b048f966c2e90db116251 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.3E-31 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS06305 c83735613b0b048f966c2e90db116251 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 4.3E-31 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS06305 c83735613b0b048f966c2e90db116251 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.3E-31 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS06305 c83735613b0b048f966c2e90db116251 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.3E-31 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS06305 c83735613b0b048f966c2e90db116251 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 3.7E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS06305 c83735613b0b048f966c2e90db116251 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 3.7E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS06305 c83735613b0b048f966c2e90db116251 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 3.7E-8 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS04385 468432105b25b4588abcb9b52ca04dc3 137 Pfam PF06155 Protein of unknown function (DUF971) 15 98 4.2E-29 T 09-03-2017 IPR010376 Domain of unknown function DUF971 Reactome: R-HSA-71262 NA29_RS18865 fa456391b3f58d56201fcd3a33a2877f 408 Gene3D G3DSA:1.20.1250.20 228 405 1.6E-21 T 09-03-2017 NA29_RS18865 fa456391b3f58d56201fcd3a33a2877f 408 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS18865 fa456391b3f58d56201fcd3a33a2877f 408 SUPERFAMILY SSF103473 18 406 6.41E-72 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS18865 fa456391b3f58d56201fcd3a33a2877f 408 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 90 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS18865 fa456391b3f58d56201fcd3a33a2877f 408 Gene3D G3DSA:1.20.1250.20 20 197 1.6E-31 T 09-03-2017 NA29_RS18865 fa456391b3f58d56201fcd3a33a2877f 408 Pfam PF07690 Major Facilitator Superfamily 24 257 7.6E-32 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS22585 0214c1e4d76de456f84c16d410e44c42 139 Gene3D G3DSA:3.10.129.10 3 136 3.7E-45 T 09-03-2017 IPR029069 HotDog domain NA29_RS22585 0214c1e4d76de456f84c16d410e44c42 139 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 22 133 7.4E-45 T 09-03-2017 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 NA29_RS22585 0214c1e4d76de456f84c16d410e44c42 139 Pfam PF03061 Thioesterase superfamily 52 124 7.4E-12 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 NA29_RS22585 0214c1e4d76de456f84c16d410e44c42 139 SUPERFAMILY SSF54637 2 129 2.59E-29 T 09-03-2017 IPR029069 HotDog domain NA29_RS22585 0214c1e4d76de456f84c16d410e44c42 139 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 132 1.2E-24 T 09-03-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 NA29_RS03910 bfe5743ada432b7896298a74017e0edd 86 SMART SM00530 30 84 0.0069 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS03910 bfe5743ada432b7896298a74017e0edd 86 Pfam PF01381 Helix-turn-helix 33 74 1.2E-6 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS03910 bfe5743ada432b7896298a74017e0edd 86 SUPERFAMILY SSF47413 30 83 3.33E-9 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS03910 bfe5743ada432b7896298a74017e0edd 86 Gene3D G3DSA:1.10.260.40 31 85 3.9E-16 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS00820 91479e51bc5538f195d0fec2628b7dd5 671 Pfam PF00263 Bacterial type II and III secretion system protein 427 586 8.6E-34 T 09-03-2017 IPR004846 Type II/III secretion system GO:0009306 NA29_RS00820 91479e51bc5538f195d0fec2628b7dd5 671 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 372 392 6.1E-34 T 09-03-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 NA29_RS00820 91479e51bc5538f195d0fec2628b7dd5 671 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 439 458 6.1E-34 T 09-03-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 NA29_RS00820 91479e51bc5538f195d0fec2628b7dd5 671 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 473 488 6.1E-34 T 09-03-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 NA29_RS00820 91479e51bc5538f195d0fec2628b7dd5 671 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 235 252 6.1E-34 T 09-03-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 NA29_RS00820 91479e51bc5538f195d0fec2628b7dd5 671 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 566 585 6.1E-34 T 09-03-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 NA29_RS00820 91479e51bc5538f195d0fec2628b7dd5 671 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 321 588 1.1E-83 T 09-03-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 NA29_RS00820 91479e51bc5538f195d0fec2628b7dd5 671 Pfam PF03958 Bacterial type II/III secretion system short domain 225 369 7.7E-12 T 09-03-2017 IPR005644 NolW-like NA29_RS00820 91479e51bc5538f195d0fec2628b7dd5 671 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 533 566 - T 09-03-2017 IPR004845 Type II secretion system GspD, conserved site GO:0008565 NA29_RS21825 1a8feed29457cfe6706932000b236fa5 112 Gene3D G3DSA:2.30.30.110 2 103 1.8E-26 T 09-03-2017 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor NA29_RS21825 1a8feed29457cfe6706932000b236fa5 112 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 103 2.3E-21 T 09-03-2017 IPR003477 mRNA interferase PemK-like protein GO:0003677 NA29_RS21825 1a8feed29457cfe6706932000b236fa5 112 SUPERFAMILY SSF50118 2 103 6.54E-24 T 09-03-2017 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor NA29_RS15700 72a540fec165e94676a91f60d28b383b 312 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 312 63.26 T 09-03-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 NA29_RS15700 72a540fec165e94676a91f60d28b383b 312 Pfam PF03186 CobD/Cbib protein 32 256 2.4E-26 T 09-03-2017 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 NA29_RS09230 f350f61fa919577883a71674409b9821 473 Gene3D G3DSA:3.30.465.10 98 219 7.7E-34 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS09230 f350f61fa919577883a71674409b9821 473 Pfam PF02913 FAD linked oxidases, C-terminal domain 219 470 5.4E-48 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 NA29_RS09230 f350f61fa919577883a71674409b9821 473 Gene3D G3DSA:1.10.45.10 432 470 3.0E-12 T 09-03-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 NA29_RS09230 f350f61fa919577883a71674409b9821 473 SUPERFAMILY SSF55103 222 473 2.13E-56 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NA29_RS09230 f350f61fa919577883a71674409b9821 473 Gene3D G3DSA:3.30.43.10 2 97 3.7E-21 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NA29_RS09230 f350f61fa919577883a71674409b9821 473 SUPERFAMILY SSF56176 5 219 4.28E-71 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS09230 f350f61fa919577883a71674409b9821 473 Pfam PF01565 FAD binding domain 42 179 1.3E-32 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NA29_RS23220 b49eb3f5cf7f3170f5fb9436fe4fc424 150 Pfam PF06891 P2 phage tail completion protein R (GpR) 2 133 7.4E-39 T 09-03-2017 IPR009678 Bacteriophage tail completion protein R NA29_RS03465 3c9b92ba5bdb013870e547fa2fa9cf7c 248 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS03465 3c9b92ba5bdb013870e547fa2fa9cf7c 248 PIRSF PIRSF039085 4 247 3.1E-98 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 NA29_RS03465 3c9b92ba5bdb013870e547fa2fa9cf7c 248 Gene3D G3DSA:3.40.50.300 6 242 4.4E-76 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03465 3c9b92ba5bdb013870e547fa2fa9cf7c 248 SMART SM00382 32 219 4.4E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS03465 3c9b92ba5bdb013870e547fa2fa9cf7c 248 Pfam PF00005 ABC transporter 23 171 6.1E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS03465 3c9b92ba5bdb013870e547fa2fa9cf7c 248 SUPERFAMILY SSF52540 7 236 2.61E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03230 15034282bdcb2b5731401af137bd674a 299 SUPERFAMILY SSF46785 6 116 2.39E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03230 15034282bdcb2b5731401af137bd674a 299 Pfam PF03466 LysR substrate binding domain 97 288 5.3E-30 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS03230 15034282bdcb2b5731401af137bd674a 299 Gene3D G3DSA:1.10.10.10 11 94 6.1E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03230 15034282bdcb2b5731401af137bd674a 299 Gene3D G3DSA:3.40.190.10 99 196 5.5E-26 T 09-03-2017 NA29_RS03230 15034282bdcb2b5731401af137bd674a 299 SUPERFAMILY SSF53850 98 295 3.26E-31 T 09-03-2017 NA29_RS03230 15034282bdcb2b5731401af137bd674a 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 70 2.3E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01950 de649eb3bf0d9cb6a9f29c7c7104beaf 69 Pfam PF01381 Helix-turn-helix 13 66 1.5E-14 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS01950 de649eb3bf0d9cb6a9f29c7c7104beaf 69 SUPERFAMILY SSF47413 3 68 1.02E-16 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS01950 de649eb3bf0d9cb6a9f29c7c7104beaf 69 Gene3D G3DSA:1.10.260.40 8 68 8.9E-19 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS01950 de649eb3bf0d9cb6a9f29c7c7104beaf 69 SMART SM00530 12 67 7.8E-13 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS21675 1f5a1ef16da3b4c30c13954c1c17868e 278 Pfam PF08543 Phosphomethylpyrimidine kinase 16 255 1.3E-47 T 09-03-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 NA29_RS21675 1f5a1ef16da3b4c30c13954c1c17868e 278 Gene3D G3DSA:3.40.1190.20 7 261 1.6E-50 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS21675 1f5a1ef16da3b4c30c13954c1c17868e 278 SUPERFAMILY SSF53613 6 264 5.77E-43 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS15885 ab7d102f41a95d317947c86fbec430cb 273 SUPERFAMILY SSF54060 14 238 1.24E-63 T 09-03-2017 NA29_RS15885 ab7d102f41a95d317947c86fbec430cb 273 Gene3D G3DSA:3.40.570.10 16 242 3.5E-60 T 09-03-2017 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 NA29_RS15885 ab7d102f41a95d317947c86fbec430cb 273 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 101 109 - T 09-03-2017 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 NA29_RS15885 ab7d102f41a95d317947c86fbec430cb 273 Pfam PF01223 DNA/RNA non-specific endonuclease 39 228 3.2E-44 T 09-03-2017 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 NA29_RS15885 ab7d102f41a95d317947c86fbec430cb 273 SMART SM00477 40 229 1.9E-41 T 09-03-2017 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 NA29_RS15885 ab7d102f41a95d317947c86fbec430cb 273 SMART SM00892 39 229 3.4E-40 T 09-03-2017 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 NA29_RS07590 629140d1459cb8f922ea00437be8f32d 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 246 5.6E-24 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS07590 629140d1459cb8f922ea00437be8f32d 259 SUPERFAMILY SSF161098 54 234 2.22E-29 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS07590 629140d1459cb8f922ea00437be8f32d 259 Gene3D G3DSA:1.10.3720.10 51 247 8.8E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16250 84e22de9df02aeb51008b9eb3c743e5e 363 PIRSF PIRSF017617 1 361 2.9E-101 T 09-03-2017 IPR023603 Threonine aldolase NA29_RS16250 84e22de9df02aeb51008b9eb3c743e5e 363 Gene3D G3DSA:3.40.640.10 5 254 8.8E-67 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS16250 84e22de9df02aeb51008b9eb3c743e5e 363 SUPERFAMILY SSF53383 10 350 8.7E-93 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS16250 84e22de9df02aeb51008b9eb3c743e5e 363 Gene3D G3DSA:3.90.1150.10 256 349 1.2E-19 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS16250 84e22de9df02aeb51008b9eb3c743e5e 363 Pfam PF01212 Beta-eliminating lyase 11 294 9.9E-81 T 09-03-2017 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 NA29_RS01235 396737daebff5e1054b2b8e4fa604a97 233 SUPERFAMILY SSF89562 23 183 4.19E-49 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NA29_RS01235 396737daebff5e1054b2b8e4fa604a97 233 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 3 224 1.9E-105 T 09-03-2017 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 NA29_RS01235 396737daebff5e1054b2b8e4fa604a97 233 Pfam PF03737 Demethylmenaquinone methyltransferase 26 173 1.0E-38 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NA29_RS01235 396737daebff5e1054b2b8e4fa604a97 233 Gene3D G3DSA:3.50.30.40 24 180 1.2E-47 T 09-03-2017 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein NA29_RS10190 780ed8a0dfa0d5ebc453d21f240f30cc 371 SMART SM00116 246 294 1.7E-4 T 09-03-2017 IPR000644 CBS domain NA29_RS10190 780ed8a0dfa0d5ebc453d21f240f30cc 371 SMART SM00116 321 369 3.1E-6 T 09-03-2017 IPR000644 CBS domain NA29_RS10190 780ed8a0dfa0d5ebc453d21f240f30cc 371 Pfam PF04982 HPP family 56 176 3.1E-35 T 09-03-2017 IPR007065 HPP NA29_RS10190 780ed8a0dfa0d5ebc453d21f240f30cc 371 Pfam PF00571 CBS domain 314 369 1.8E-7 T 09-03-2017 IPR000644 CBS domain NA29_RS10190 780ed8a0dfa0d5ebc453d21f240f30cc 371 Pfam PF00571 CBS domain 240 289 3.3E-7 T 09-03-2017 IPR000644 CBS domain NA29_RS10190 780ed8a0dfa0d5ebc453d21f240f30cc 371 Gene3D G3DSA:3.10.580.10 236 367 1.1E-24 T 09-03-2017 NA29_RS10190 780ed8a0dfa0d5ebc453d21f240f30cc 371 SUPERFAMILY SSF54631 236 366 4.4E-24 T 09-03-2017 NA29_RS13185 3bfdee6ba426bd89f56107de370e4767 391 Pfam PF02684 Lipid-A-disaccharide synthetase 14 377 7.2E-94 T 09-03-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 NA29_RS13185 3bfdee6ba426bd89f56107de370e4767 391 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 10 386 36.562 T 09-03-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 NA29_RS13185 3bfdee6ba426bd89f56107de370e4767 391 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 12 378 2.6E-98 T 09-03-2017 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 NA29_RS13185 3bfdee6ba426bd89f56107de370e4767 391 SUPERFAMILY SSF53756 15 385 2.28E-34 T 09-03-2017 NA29_RS13185 3bfdee6ba426bd89f56107de370e4767 391 Gene3D G3DSA:3.40.50.2000 166 361 2.9E-8 T 09-03-2017 NA29_RS22425 991a1d1f596fffd03935a76f766fda35 396 SUPERFAMILY SSF52490 15 206 1.14E-63 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 NA29_RS22425 991a1d1f596fffd03935a76f766fda35 396 SMART SM00864 14 203 3.9E-103 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 NA29_RS22425 991a1d1f596fffd03935a76f766fda35 396 Pfam PF12327 FtsZ family, C-terminal domain 220 314 1.2E-30 T 09-03-2017 IPR024757 Cell division protein FtsZ, C-terminal NA29_RS22425 991a1d1f596fffd03935a76f766fda35 396 Gene3D G3DSA:3.40.50.1440 15 212 4.3E-85 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 NA29_RS22425 991a1d1f596fffd03935a76f766fda35 396 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 381 35.561 T 09-03-2017 IPR000158 Cell division protein FtsZ GO:0005525 NA29_RS22425 991a1d1f596fffd03935a76f766fda35 396 ProSitePatterns PS01135 FtsZ protein signature 2. 95 116 - T 09-03-2017 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 NA29_RS22425 991a1d1f596fffd03935a76f766fda35 396 SUPERFAMILY SSF55307 202 316 6.18E-39 T 09-03-2017 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 NA29_RS22425 991a1d1f596fffd03935a76f766fda35 396 SMART SM00865 205 323 4.1E-51 T 09-03-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 NA29_RS22425 991a1d1f596fffd03935a76f766fda35 396 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 171 2.6E-37 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 NA29_RS22425 991a1d1f596fffd03935a76f766fda35 396 PRINTS PR00423 Cell division protein FtsZ signature 96 116 2.7E-46 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 NA29_RS22425 991a1d1f596fffd03935a76f766fda35 396 PRINTS PR00423 Cell division protein FtsZ signature 210 231 2.7E-46 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 NA29_RS22425 991a1d1f596fffd03935a76f766fda35 396 PRINTS PR00423 Cell division protein FtsZ signature 187 209 2.7E-46 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 NA29_RS22425 991a1d1f596fffd03935a76f766fda35 396 PRINTS PR00423 Cell division protein FtsZ signature 124 145 2.7E-46 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 NA29_RS22425 991a1d1f596fffd03935a76f766fda35 396 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 6 323 1.9E-118 T 09-03-2017 IPR000158 Cell division protein FtsZ GO:0005525 NA29_RS22425 991a1d1f596fffd03935a76f766fda35 396 Gene3D G3DSA:3.30.1330.20 213 317 4.7E-43 T 09-03-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 NA29_RS11190 2b710622edf3ce91cb361eb8a32f3451 541 SUPERFAMILY SSF52540 307 521 1.13E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11190 2b710622edf3ce91cb361eb8a32f3451 541 Gene3D G3DSA:3.40.50.300 317 504 4.3E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11190 2b710622edf3ce91cb361eb8a32f3451 541 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 347 462 6.6E-12 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 NA29_RS08825 8665c9e40fc551bbe020cc22add40978 321 Gene3D G3DSA:3.20.20.140 7 321 4.2E-88 T 09-03-2017 NA29_RS08825 8665c9e40fc551bbe020cc22add40978 321 SUPERFAMILY SSF51556 6 321 3.18E-81 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS08825 8665c9e40fc551bbe020cc22add40978 321 Pfam PF04909 Amidohydrolase 16 321 3.6E-46 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS03600 f8fbe37402a4c902fc3fa1772ff968bc 412 Gene3D G3DSA:3.10.450.50 245 378 8.6E-16 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS03600 f8fbe37402a4c902fc3fa1772ff968bc 412 Pfam PF01738 Dienelactone hydrolase family 16 230 5.7E-48 T 09-03-2017 IPR002925 Dienelactone hydrolase GO:0016787 NA29_RS03600 f8fbe37402a4c902fc3fa1772ff968bc 412 Gene3D G3DSA:3.40.50.1820 3 232 2.0E-54 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS03600 f8fbe37402a4c902fc3fa1772ff968bc 412 SUPERFAMILY SSF54427 245 380 2.11E-24 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS03600 f8fbe37402a4c902fc3fa1772ff968bc 412 SUPERFAMILY SSF53474 1 232 1.08E-49 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS00580 f983265d0bec675c481f38f1ff325d12 401 Gene3D G3DSA:3.40.50.2300 165 307 3.0E-21 T 09-03-2017 NA29_RS00580 f983265d0bec675c481f38f1ff325d12 401 SUPERFAMILY SSF53822 33 400 7.74E-76 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS00580 f983265d0bec675c481f38f1ff325d12 401 Gene3D G3DSA:3.40.50.2300 28 153 4.3E-33 T 09-03-2017 NA29_RS00580 f983265d0bec675c481f38f1ff325d12 401 Gene3D G3DSA:3.40.50.2300 308 360 4.3E-33 T 09-03-2017 NA29_RS00580 f983265d0bec675c481f38f1ff325d12 401 Pfam PF13458 Periplasmic binding protein 33 369 4.2E-68 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS01335 85b5d1457566673a4ed0508b83c147c1 546 SUPERFAMILY SSF53850 33 545 1.54E-135 T 09-03-2017 NA29_RS01335 85b5d1457566673a4ed0508b83c147c1 546 Gene3D G3DSA:3.10.105.10 303 516 3.6E-63 T 09-03-2017 NA29_RS01335 85b5d1457566673a4ed0508b83c147c1 546 Gene3D G3DSA:3.90.76.10 43 221 1.1E-45 T 09-03-2017 NA29_RS01335 85b5d1457566673a4ed0508b83c147c1 546 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 466 1.7E-87 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain NA29_RS01335 85b5d1457566673a4ed0508b83c147c1 546 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 82 104 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site NA29_RS01335 85b5d1457566673a4ed0508b83c147c1 546 PIRSF PIRSF002741 1 543 9.7E-111 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 NA29_RS04580 aa16cc4f45b7105d089afa2e4f4f07ae 235 Gene3D G3DSA:3.40.50.1240 4 219 1.0E-66 T 09-03-2017 IPR029033 Histidine phosphatase superfamily NA29_RS04580 aa16cc4f45b7105d089afa2e4f4f07ae 235 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 206 5.6E-61 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 NA29_RS04580 aa16cc4f45b7105d089afa2e4f4f07ae 235 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 10 19 - T 09-03-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 NA29_RS04580 aa16cc4f45b7105d089afa2e4f4f07ae 235 SMART SM00855 7 167 6.9E-24 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 NA29_RS04580 aa16cc4f45b7105d089afa2e4f4f07ae 235 SUPERFAMILY SSF53254 5 215 4.02E-65 T 09-03-2017 IPR029033 Histidine phosphatase superfamily NA29_RS20615 66a790910a2b7db0b7a2f84da36fc533 294 SUPERFAMILY SSF53850 89 292 2.17E-39 T 09-03-2017 NA29_RS20615 66a790910a2b7db0b7a2f84da36fc533 294 Gene3D G3DSA:1.10.10.10 3 82 8.4E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20615 66a790910a2b7db0b7a2f84da36fc533 294 Gene3D G3DSA:3.40.190.10 93 177 1.0E-16 T 09-03-2017 NA29_RS20615 66a790910a2b7db0b7a2f84da36fc533 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.3E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS20615 66a790910a2b7db0b7a2f84da36fc533 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS20615 66a790910a2b7db0b7a2f84da36fc533 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS20615 66a790910a2b7db0b7a2f84da36fc533 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS20615 66a790910a2b7db0b7a2f84da36fc533 294 SUPERFAMILY SSF46785 3 110 2.72E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20615 66a790910a2b7db0b7a2f84da36fc533 294 Pfam PF03466 LysR substrate binding domain 89 290 2.1E-36 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS20615 66a790910a2b7db0b7a2f84da36fc533 294 Gene3D G3DSA:3.40.190.10 178 259 8.3E-21 T 09-03-2017 NA29_RS02470 44ba7f66d195dba531db2ba244d01867 275 Pfam PF00156 Phosphoribosyl transferase domain 197 268 4.8E-8 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 NA29_RS02470 44ba7f66d195dba531db2ba244d01867 275 SUPERFAMILY SSF53271 88 269 2.21E-32 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS02470 44ba7f66d195dba531db2ba244d01867 275 Gene3D G3DSA:3.40.50.2020 90 269 1.7E-32 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS19345 5a10f5f7d86dfee563d16867c2a7b22c 525 SUPERFAMILY SSF56801 6 520 1.24E-135 T 09-03-2017 NA29_RS19345 5a10f5f7d86dfee563d16867c2a7b22c 525 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS19345 5a10f5f7d86dfee563d16867c2a7b22c 525 Gene3D G3DSA:3.40.50.980 8 173 8.5E-27 T 09-03-2017 NA29_RS19345 5a10f5f7d86dfee563d16867c2a7b22c 525 Pfam PF00501 AMP-binding enzyme 13 421 5.3E-83 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS19345 5a10f5f7d86dfee563d16867c2a7b22c 525 Gene3D G3DSA:3.30.300.30 422 520 1.6E-28 T 09-03-2017 NA29_RS19345 5a10f5f7d86dfee563d16867c2a7b22c 525 Gene3D G3DSA:3.40.50.980 174 326 4.5E-31 T 09-03-2017 NA29_RS19345 5a10f5f7d86dfee563d16867c2a7b22c 525 Pfam PF13193 AMP-binding enzyme C-terminal domain 432 507 2.5E-18 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS19345 5a10f5f7d86dfee563d16867c2a7b22c 525 Gene3D G3DSA:2.30.38.10 341 414 9.8E-27 T 09-03-2017 NA29_RS04675 4d18a3a167d33b74fe0655715d638339 388 Pfam PF03054 tRNA methyl transferase 4 357 3.8E-133 T 09-03-2017 NA29_RS04675 4d18a3a167d33b74fe0655715d638339 388 Gene3D G3DSA:2.30.30.280 210 278 7.6E-33 T 09-03-2017 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 NA29_RS04675 4d18a3a167d33b74fe0655715d638339 388 Gene3D G3DSA:2.40.30.10 280 362 3.2E-29 T 09-03-2017 NA29_RS04675 4d18a3a167d33b74fe0655715d638339 388 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 4 357 1.5E-130 T 09-03-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 NA29_RS04675 4d18a3a167d33b74fe0655715d638339 388 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 358 38.494 T 09-03-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 NA29_RS04675 4d18a3a167d33b74fe0655715d638339 388 Gene3D G3DSA:3.40.50.620 2 208 1.9E-94 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS04675 4d18a3a167d33b74fe0655715d638339 388 SUPERFAMILY SSF52402 2 241 7.72E-55 T 09-03-2017 NA29_RS13815 7d931ed7dac1f5bb0618621efabbef9a 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.008 T 09-03-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 NA29_RS13815 7d931ed7dac1f5bb0618621efabbef9a 91 Gene3D G3DSA:1.10.3880.10 1 89 9.4E-41 T 09-03-2017 NA29_RS13815 7d931ed7dac1f5bb0618621efabbef9a 91 PIRSF PIRSF029827 1 90 6.8E-39 T 09-03-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 NA29_RS13815 7d931ed7dac1f5bb0618621efabbef9a 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 3.0E-35 T 09-03-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 NA29_RS13815 7d931ed7dac1f5bb0618621efabbef9a 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.9E-42 T 09-03-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 NA29_RS13815 7d931ed7dac1f5bb0618621efabbef9a 91 SUPERFAMILY SSF111148 1 90 3.27E-39 T 09-03-2017 IPR007457 Fe(II) trafficking protein YggX GO:0005506 NA29_RS20750 9f6fadca078c6693ba0c392a3cdbfab2 385 PRINTS PR00184 Neisseria sp. porin signature 315 339 1.1E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS20750 9f6fadca078c6693ba0c392a3cdbfab2 385 PRINTS PR00184 Neisseria sp. porin signature 52 77 1.1E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS20750 9f6fadca078c6693ba0c392a3cdbfab2 385 PRINTS PR00184 Neisseria sp. porin signature 154 171 1.1E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS20750 9f6fadca078c6693ba0c392a3cdbfab2 385 Pfam PF13609 Gram-negative porin 8 334 4.1E-44 T 09-03-2017 NA29_RS20750 9f6fadca078c6693ba0c392a3cdbfab2 385 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 183 195 6.8E-7 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS20750 9f6fadca078c6693ba0c392a3cdbfab2 385 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 50 61 6.8E-7 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS20750 9f6fadca078c6693ba0c392a3cdbfab2 385 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 318 335 6.8E-7 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS20750 9f6fadca078c6693ba0c392a3cdbfab2 385 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 6.8E-7 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS20750 9f6fadca078c6693ba0c392a3cdbfab2 385 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 155 166 6.8E-7 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS20750 9f6fadca078c6693ba0c392a3cdbfab2 385 SUPERFAMILY SSF56935 15 385 4.88E-82 T 09-03-2017 NA29_RS20750 9f6fadca078c6693ba0c392a3cdbfab2 385 Gene3D G3DSA:2.40.160.10 20 385 9.5E-93 T 09-03-2017 IPR023614 Porin domain NA29_RS15350 379f247d68eecefa00883d681516ffca 407 SUPERFAMILY SSF53383 10 394 4.21E-113 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS15350 379f247d68eecefa00883d681516ffca 407 Gene3D G3DSA:3.40.640.10 22 257 2.2E-100 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS15350 379f247d68eecefa00883d681516ffca 407 Pfam PF00266 Aminotransferase class-V 10 372 1.4E-88 T 09-03-2017 IPR000192 Aminotransferase class V domain NA29_RS15350 379f247d68eecefa00883d681516ffca 407 Gene3D G3DSA:3.90.1150.10 258 377 1.5E-51 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS15350 379f247d68eecefa00883d681516ffca 407 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 200 219 - T 09-03-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site NA29_RS15350 379f247d68eecefa00883d681516ffca 407 PIRSF PIRSF005572 7 387 6.4E-135 T 09-03-2017 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 NA29_RS15350 379f247d68eecefa00883d681516ffca 407 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 7 407 8.3E-231 T 09-03-2017 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 NA29_RS15350 379f247d68eecefa00883d681516ffca 407 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 6 398 55.172 T 09-03-2017 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 NA29_RS08970 117e79720c5264d6a6d7a9a342f2433b 194 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 5 188 1.5E-67 T 09-03-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 NA29_RS08970 117e79720c5264d6a6d7a9a342f2433b 194 Pfam PF02669 K+-transporting ATPase, c chain 6 187 5.6E-73 T 09-03-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 NA29_RS08970 117e79720c5264d6a6d7a9a342f2433b 194 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 189 35.297 T 09-03-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 NA29_RS08970 117e79720c5264d6a6d7a9a342f2433b 194 PIRSF PIRSF001296 1 192 2.4E-75 T 09-03-2017 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 NA29_RS13425 2f5ade5b6c4be789faa6a648aa515537 147 SUPERFAMILY SSF110857 10 142 5.89E-28 T 09-03-2017 IPR013024 Butirosin biosynthesis, BtrG-like NA29_RS13425 2f5ade5b6c4be789faa6a648aa515537 147 Gene3D G3DSA:3.10.490.10 11 143 1.8E-28 T 09-03-2017 IPR013024 Butirosin biosynthesis, BtrG-like NA29_RS13425 2f5ade5b6c4be789faa6a648aa515537 147 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 12 135 1.2E-18 T 09-03-2017 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like NA29_RS05920 6b74d90670ee142f94d628db7a5b050a 490 Pfam PF00324 Amino acid permease 40 477 6.0E-95 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 NA29_RS05920 6b74d90670ee142f94d628db7a5b050a 490 PIRSF PIRSF006060 9 488 4.6E-72 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NA29_RS05920 6b74d90670ee142f94d628db7a5b050a 490 ProSitePatterns PS00218 Amino acid permeases signature. 64 94 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 NA29_RS01310 d86809caff74b9c5377e09061549585b 227 Pfam PF04172 LrgB-like family 12 225 9.1E-67 T 09-03-2017 IPR007300 CidB/LrgB family NA29_RS06135 78acfd3912d6249d52b243f16fb44a17 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 283 1.8E-38 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS01090 5ac9ea05bcc510e79ce7845dc9e4d778 164 Gene3D G3DSA:1.10.10.10 11 87 8.2E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS01090 5ac9ea05bcc510e79ce7845dc9e4d778 164 SUPERFAMILY SSF46785 13 157 6.22E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04045 92f17871185602c18ed27a38b95a555c 268 SUPERFAMILY SSF53474 37 261 6.43E-31 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS04045 92f17871185602c18ed27a38b95a555c 268 Gene3D G3DSA:3.40.50.1820 44 263 2.6E-30 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS04045 92f17871185602c18ed27a38b95a555c 268 Pfam PF12697 Alpha/beta hydrolase family 46 257 1.4E-20 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS24210 a92d302b3e6a03434ceed2a872fe879c 1188 Gene3D G3DSA:3.40.920.10 742 940 9.2E-17 T 09-03-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 NA29_RS24210 a92d302b3e6a03434ceed2a872fe879c 1188 SUPERFAMILY SSF53323 740 947 7.45E-33 T 09-03-2017 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 NA29_RS24210 a92d302b3e6a03434ceed2a872fe879c 1188 Gene3D G3DSA:3.40.50.970 512 665 8.9E-11 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS24210 a92d302b3e6a03434ceed2a872fe879c 1188 SUPERFAMILY SSF52518 456 641 2.21E-12 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS24210 a92d302b3e6a03434ceed2a872fe879c 1188 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 748 934 2.2E-24 T 09-03-2017 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 NA29_RS24210 a92d302b3e6a03434ceed2a872fe879c 1188 SUPERFAMILY SSF52518 30 266 1.47E-20 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS24210 a92d302b3e6a03434ceed2a872fe879c 1188 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 476 561 3.8E-5 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NA29_RS08600 87e428a29bbfaaa9fe54be0dfb48625b 288 Gene3D G3DSA:3.40.50.300 12 240 4.0E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08600 87e428a29bbfaaa9fe54be0dfb48625b 288 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS08600 87e428a29bbfaaa9fe54be0dfb48625b 288 SUPERFAMILY SSF52540 13 242 2.36E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08600 87e428a29bbfaaa9fe54be0dfb48625b 288 Pfam PF00005 ABC transporter 28 176 1.1E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS08600 87e428a29bbfaaa9fe54be0dfb48625b 288 SMART SM00382 37 234 1.5E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS16685 7647369a9faea51c6193e43dda69005d 272 SUPERFAMILY SSF55781 77 259 1.37E-41 T 09-03-2017 IPR029016 GAF domain-like NA29_RS16685 7647369a9faea51c6193e43dda69005d 272 SMART SM00346 11 101 5.4E-26 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS16685 7647369a9faea51c6193e43dda69005d 272 Pfam PF09339 IclR helix-turn-helix domain 14 62 4.8E-14 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS16685 7647369a9faea51c6193e43dda69005d 272 Pfam PF01614 Bacterial transcriptional regulator 133 254 1.5E-23 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS16685 7647369a9faea51c6193e43dda69005d 272 Gene3D G3DSA:3.30.450.40 81 261 8.2E-49 T 09-03-2017 IPR029016 GAF domain-like NA29_RS16685 7647369a9faea51c6193e43dda69005d 272 SUPERFAMILY SSF46785 11 85 7.68E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16685 7647369a9faea51c6193e43dda69005d 272 Gene3D G3DSA:1.10.10.10 4 80 9.4E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18380 60b7174f1d38f5b2e460316dea1237b8 141 Gene3D G3DSA:1.10.286.20 7 49 3.2E-15 T 09-03-2017 NA29_RS18380 60b7174f1d38f5b2e460316dea1237b8 141 SUPERFAMILY SSF54534 54 128 1.83E-16 T 09-03-2017 NA29_RS18380 60b7174f1d38f5b2e460316dea1237b8 141 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 55 127 2.9E-19 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 NA29_RS18380 60b7174f1d38f5b2e460316dea1237b8 141 Pfam PF14760 Rnk N-terminus 9 49 1.5E-12 T 09-03-2017 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain NA29_RS18380 60b7174f1d38f5b2e460316dea1237b8 141 Gene3D G3DSA:3.10.50.30 51 141 4.3E-28 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 NA29_RS03170 f9eb44c345aeaa949b1b42cd2c8a1dc3 410 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 43 393 5.5E-85 T 09-03-2017 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 NA29_RS03170 f9eb44c345aeaa949b1b42cd2c8a1dc3 410 Gene3D G3DSA:3.40.50.1100 117 392 1.6E-40 T 09-03-2017 NA29_RS03170 f9eb44c345aeaa949b1b42cd2c8a1dc3 410 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 42 380 2.5E-67 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS03170 f9eb44c345aeaa949b1b42cd2c8a1dc3 410 SUPERFAMILY SSF53686 40 360 6.81E-62 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS17845 3de0a62e206541eae7d44ba5668cd2c5 370 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 369 4.1E-153 T 09-03-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 NA29_RS17845 3de0a62e206541eae7d44ba5668cd2c5 370 Gene3D G3DSA:3.90.1150.10 268 369 1.7E-40 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS17845 3de0a62e206541eae7d44ba5668cd2c5 370 PIRSF PIRSF000525 1 370 1.8E-151 T 09-03-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 NA29_RS17845 3de0a62e206541eae7d44ba5668cd2c5 370 Pfam PF00266 Aminotransferase class-V 5 358 1.2E-52 T 09-03-2017 IPR000192 Aminotransferase class V domain NA29_RS17845 3de0a62e206541eae7d44ba5668cd2c5 370 SUPERFAMILY SSF53383 1 367 1.58E-116 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS17845 3de0a62e206541eae7d44ba5668cd2c5 370 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 369 50.772 T 09-03-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 NA29_RS17845 3de0a62e206541eae7d44ba5668cd2c5 370 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 09-03-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site NA29_RS17845 3de0a62e206541eae7d44ba5668cd2c5 370 Gene3D G3DSA:3.40.640.10 17 267 4.9E-110 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS18125 8f603cb9daf9ea51655b41b8ca3d7e9e 195 Gene3D G3DSA:1.20.120.20 57 153 2.2E-5 T 09-03-2017 NA29_RS18125 8f603cb9daf9ea51655b41b8ca3d7e9e 195 SUPERFAMILY SSF58113 63 154 1.31E-8 T 09-03-2017 NA29_RS00645 347f1b086ecb432040936e6e04c98656 336 SUPERFAMILY SSF52283 1 136 1.34E-22 T 09-03-2017 NA29_RS00645 347f1b086ecb432040936e6e04c98656 336 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 18 322 1.7E-17 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 NA29_RS00645 347f1b086ecb432040936e6e04c98656 336 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 296 4.2E-52 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NA29_RS00645 347f1b086ecb432040936e6e04c98656 336 SUPERFAMILY SSF51735 106 296 1.57E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS00645 347f1b086ecb432040936e6e04c98656 336 Gene3D G3DSA:3.40.50.720 1 114 2.5E-28 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS00645 347f1b086ecb432040936e6e04c98656 336 Gene3D G3DSA:3.40.50.720 115 297 3.5E-58 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS06170 6bb38a5562cd1a242f9fb49a7d97e056 406 Gene3D G3DSA:3.90.1150.10 271 380 1.2E-34 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS06170 6bb38a5562cd1a242f9fb49a7d97e056 406 PIRSF PIRSF000524 7 398 1.8E-124 T 09-03-2017 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 NA29_RS06170 6bb38a5562cd1a242f9fb49a7d97e056 406 Pfam PF00266 Aminotransferase class-V 13 329 3.6E-33 T 09-03-2017 IPR000192 Aminotransferase class V domain NA29_RS06170 6bb38a5562cd1a242f9fb49a7d97e056 406 SUPERFAMILY SSF53383 10 378 1.86E-100 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS06170 6bb38a5562cd1a242f9fb49a7d97e056 406 Gene3D G3DSA:3.40.640.10 23 270 2.1E-54 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS24975 800b5687dc69a2a48dd0928decbbf684 383 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 346 3.8E-130 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS24975 800b5687dc69a2a48dd0928decbbf684 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.6E-35 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS24975 800b5687dc69a2a48dd0928decbbf684 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.6E-35 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS24975 800b5687dc69a2a48dd0928decbbf684 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.6E-35 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS24975 800b5687dc69a2a48dd0928decbbf684 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 301 322 1.6E-35 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS24975 800b5687dc69a2a48dd0928decbbf684 383 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.6E-35 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS24975 800b5687dc69a2a48dd0928decbbf684 383 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 1.2E-126 T 09-03-2017 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 NA29_RS24975 800b5687dc69a2a48dd0928decbbf684 383 SUPERFAMILY SSF160544 244 350 5.62E-40 T 09-03-2017 IPR029025 Type III secretion system substrate exporter, C-terminal NA29_RS24975 800b5687dc69a2a48dd0928decbbf684 383 Gene3D G3DSA:3.40.1690.10 218 357 9.9E-63 T 09-03-2017 IPR029025 Type III secretion system substrate exporter, C-terminal NA29_RS00915 94b51c19a019f0b7259ab5025012683c 114 Gene3D G3DSA:3.30.1460.10 14 110 1.4E-8 T 09-03-2017 NA29_RS00915 94b51c19a019f0b7259ab5025012683c 114 Pfam PF05932 Tir chaperone protein (CesT) family 12 109 1.8E-11 T 09-03-2017 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 NA29_RS00915 94b51c19a019f0b7259ab5025012683c 114 SUPERFAMILY SSF69635 15 110 1.46E-7 T 09-03-2017 NA29_RS17240 e6d9fe463382cf3d142e174352778c38 709 Gene3D G3DSA:2.40.170.20 151 707 1.9E-80 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS17240 e6d9fe463382cf3d142e174352778c38 709 Gene3D G3DSA:2.170.130.10 4 148 1.3E-34 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS17240 e6d9fe463382cf3d142e174352778c38 709 Pfam PF07715 TonB-dependent Receptor Plug Domain 27 138 8.4E-21 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS17240 e6d9fe463382cf3d142e174352778c38 709 Pfam PF00593 TonB dependent receptor 453 705 1.9E-28 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS17240 e6d9fe463382cf3d142e174352778c38 709 SUPERFAMILY SSF56935 3 709 3.66E-114 T 09-03-2017 NA29_RS06435 6b3ffbb45d0e8ca5b222cee517495f66 208 ProSitePatterns PS00194 Thioredoxin family active site. 91 109 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 NA29_RS06435 6b3ffbb45d0e8ca5b222cee517495f66 208 Pfam PF00578 AhpC/TSA family 67 176 2.2E-25 T 09-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 NA29_RS06435 6b3ffbb45d0e8ca5b222cee517495f66 208 Gene3D G3DSA:3.40.30.10 9 203 7.2E-44 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS06435 6b3ffbb45d0e8ca5b222cee517495f66 208 SUPERFAMILY SSF52833 66 202 2.3E-37 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS19775 06c87ae15d68b3b88fd87108addb8c6c 440 PIRSF PIRSF005348 2 440 5.3E-162 T 09-03-2017 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 NA29_RS19775 06c87ae15d68b3b88fd87108addb8c6c 440 Pfam PF03390 2-hydroxycarboxylate transporter family 24 434 1.1E-148 T 09-03-2017 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 NA29_RS11970 3678c1d9d380d8fe077486865d148ebc 471 Pfam PF10996 Beta-Casp domain 247 364 5.2E-24 T 09-03-2017 IPR022712 Beta-Casp domain NA29_RS11970 3678c1d9d380d8fe077486865d148ebc 471 Pfam PF00753 Metallo-beta-lactamase superfamily 17 203 7.5E-15 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS11970 3678c1d9d380d8fe077486865d148ebc 471 SMART SM00849 13 242 4.5E-15 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS11970 3678c1d9d380d8fe077486865d148ebc 471 SMART SM01027 247 366 2.0E-42 T 09-03-2017 IPR022712 Beta-Casp domain NA29_RS11970 3678c1d9d380d8fe077486865d148ebc 471 Gene3D G3DSA:3.60.15.10 1 100 2.8E-52 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS11970 3678c1d9d380d8fe077486865d148ebc 471 Gene3D G3DSA:3.60.15.10 135 256 2.8E-52 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS11970 3678c1d9d380d8fe077486865d148ebc 471 SUPERFAMILY SSF56281 1 453 2.16E-125 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS11970 3678c1d9d380d8fe077486865d148ebc 471 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 379 441 4.4E-15 T 09-03-2017 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain NA29_RS16545 f1ff2ff9b279c5a737713d796f9a431a 443 Pfam PF01554 MatE 19 176 9.0E-24 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 NA29_RS16545 f1ff2ff9b279c5a737713d796f9a431a 443 Pfam PF01554 MatE 246 400 1.6E-16 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 NA29_RS16545 f1ff2ff9b279c5a737713d796f9a431a 443 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 413 1.7E-75 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 NA29_RS08010 bb4d88541c9c7e51b2e7e82ae31cf582 159 Gene3D G3DSA:1.20.1290.10 1 147 2.0E-50 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS08010 bb4d88541c9c7e51b2e7e82ae31cf582 159 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 94 2.9E-15 T 09-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS08010 bb4d88541c9c7e51b2e7e82ae31cf582 159 SUPERFAMILY SSF69118 4 145 1.73E-42 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS08010 bb4d88541c9c7e51b2e7e82ae31cf582 159 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 37 78 2.1E-12 T 09-03-2017 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS06695 9496fe696afb9ad219e99d22f310709a 356 SUPERFAMILY SSF48403 155 322 1.46E-8 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain NA29_RS06695 9496fe696afb9ad219e99d22f310709a 356 Gene3D G3DSA:1.25.40.20 215 286 9.5E-8 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain NA29_RS10895 71690daa10c7a56422247a438e34790b 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 450 7.3E-16 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS10895 71690daa10c7a56422247a438e34790b 462 SMART SM00387 331 452 5.0E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS10895 71690daa10c7a56422247a438e34790b 462 SMART SM00304 180 232 1.5E-6 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS10895 71690daa10c7a56422247a438e34790b 462 SMART SM00388 233 291 5.2E-5 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS10895 71690daa10c7a56422247a438e34790b 462 SUPERFAMILY SSF55874 297 450 5.89E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS10895 71690daa10c7a56422247a438e34790b 462 Gene3D G3DSA:3.30.565.10 296 453 4.7E-30 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS10895 71690daa10c7a56422247a438e34790b 462 SUPERFAMILY SSF47384 217 279 5.69E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS10895 71690daa10c7a56422247a438e34790b 462 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 275 2.1E-7 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS10895 71690daa10c7a56422247a438e34790b 462 Gene3D G3DSA:1.10.287.130 223 284 1.1E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 NA29_RS10895 71690daa10c7a56422247a438e34790b 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 1.3E-10 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS10895 71690daa10c7a56422247a438e34790b 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 1.3E-10 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS10895 71690daa10c7a56422247a438e34790b 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 1.3E-10 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS10895 71690daa10c7a56422247a438e34790b 462 Pfam PF00672 HAMP domain 165 228 4.1E-12 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS04405 91d61ca4ec3eb9ee57eb1e88064c02ef 519 SUPERFAMILY SSF56112 192 435 1.44E-41 T 09-03-2017 IPR011009 Protein kinase-like domain NA29_RS04405 91d61ca4ec3eb9ee57eb1e88064c02ef 519 SUPERFAMILY SSF56112 90 157 1.44E-41 T 09-03-2017 IPR011009 Protein kinase-like domain NA29_RS04405 91d61ca4ec3eb9ee57eb1e88064c02ef 519 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 516 51.757 T 09-03-2017 IPR010232 Probable protein kinase UbiB GO:0006744 NA29_RS04405 91d61ca4ec3eb9ee57eb1e88064c02ef 519 Pfam PF03109 ABC1 family 108 230 9.6E-33 T 09-03-2017 IPR004147 UbiB domain NA29_RS04405 91d61ca4ec3eb9ee57eb1e88064c02ef 519 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 3 442 3.6E-174 T 09-03-2017 IPR010232 Probable protein kinase UbiB GO:0006744 NA29_RS04405 91d61ca4ec3eb9ee57eb1e88064c02ef 519 Gene3D G3DSA:3.90.1200.10 248 297 3.2E-5 T 09-03-2017 NA29_RS01280 34d62eeb7b1b1d032e6099b3f6300846 198 SUPERFAMILY SSF53335 9 174 6.91E-24 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS01280 34d62eeb7b1b1d032e6099b3f6300846 198 Gene3D G3DSA:3.40.50.150 13 171 8.9E-21 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS01280 34d62eeb7b1b1d032e6099b3f6300846 198 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 8 196 2.5E-81 T 09-03-2017 IPR010743 Methionine biosynthesis MetW NA29_RS01280 34d62eeb7b1b1d032e6099b3f6300846 198 Pfam PF07021 Methionine biosynthesis protein MetW 8 195 5.9E-78 T 09-03-2017 IPR010743 Methionine biosynthesis MetW NA29_RS15935 173addace67a8da1aaf6dd7289123410 252 Gene3D G3DSA:3.30.450.40 85 250 5.9E-50 T 09-03-2017 IPR029016 GAF domain-like NA29_RS15935 173addace67a8da1aaf6dd7289123410 252 SUPERFAMILY SSF55781 83 248 2.49E-44 T 09-03-2017 IPR029016 GAF domain-like NA29_RS15935 173addace67a8da1aaf6dd7289123410 252 Gene3D G3DSA:1.10.10.10 7 74 9.4E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15935 173addace67a8da1aaf6dd7289123410 252 SMART SM00346 6 96 1.8E-8 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS15935 173addace67a8da1aaf6dd7289123410 252 SUPERFAMILY SSF46785 9 76 1.45E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15935 173addace67a8da1aaf6dd7289123410 252 Pfam PF09339 IclR helix-turn-helix domain 8 57 2.6E-12 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS15935 173addace67a8da1aaf6dd7289123410 252 Pfam PF01614 Bacterial transcriptional regulator 127 246 5.6E-29 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS11875 23d6c718cd44998e1bfb57d522f8174f 178 Gene3D G3DSA:2.60.120.10 40 150 1.3E-4 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS11875 23d6c718cd44998e1bfb57d522f8174f 178 SUPERFAMILY SSF51206 39 154 9.51E-8 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like NA29_RS03180 7a30b84bef2d1553b8b59b213e3a06a9 248 Gene3D G3DSA:1.20.120.530 84 232 6.9E-36 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS03180 7a30b84bef2d1553b8b59b213e3a06a9 248 SMART SM00895 91 224 3.8E-19 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS03180 7a30b84bef2d1553b8b59b213e3a06a9 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 81 1.9E-16 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS03180 7a30b84bef2d1553b8b59b213e3a06a9 248 Gene3D G3DSA:1.10.10.10 6 83 1.3E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03180 7a30b84bef2d1553b8b59b213e3a06a9 248 Pfam PF07729 FCD domain 91 223 3.3E-24 T 09-03-2017 IPR011711 GntR, C-terminal NA29_RS03180 7a30b84bef2d1553b8b59b213e3a06a9 248 SUPERFAMILY SSF48008 88 232 1.54E-23 T 09-03-2017 IPR008920 Transcription regulator FadR/GntR, C-terminal NA29_RS03180 7a30b84bef2d1553b8b59b213e3a06a9 248 SMART SM00345 23 81 1.2E-11 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS03180 7a30b84bef2d1553b8b59b213e3a06a9 248 SUPERFAMILY SSF46785 15 85 1.08E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS24160 11e493a0f9ac998c5b96c7d91c6e3244 335 Gene3D G3DSA:1.20.1260.10 40 294 7.0E-101 T 09-03-2017 IPR012347 Ferritin-related NA29_RS24160 11e493a0f9ac998c5b96c7d91c6e3244 335 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 30 318 3.8E-161 T 09-03-2017 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.14+1.14.13.149|KEGG: 00940+1.14.13.14|MetaCyc: PWY-5176 NA29_RS24160 11e493a0f9ac998c5b96c7d91c6e3244 335 SUPERFAMILY SSF47240 50 291 7.91E-81 T 09-03-2017 IPR009078 Ferritin-like superfamily NA29_RS24160 11e493a0f9ac998c5b96c7d91c6e3244 335 Pfam PF05138 Phenylacetic acid catabolic protein 40 314 4.5E-100 T 09-03-2017 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 NA29_RS01225 81dc9b86a43982c051ec713bdd3e9119 245 SUPERFAMILY SSF52540 4 239 5.21E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01225 81dc9b86a43982c051ec713bdd3e9119 245 Pfam PF00005 ABC transporter 21 169 8.2E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS01225 81dc9b86a43982c051ec713bdd3e9119 245 SMART SM00382 30 219 1.3E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS01225 81dc9b86a43982c051ec713bdd3e9119 245 Gene3D G3DSA:3.40.50.300 3 235 4.0E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01225 81dc9b86a43982c051ec713bdd3e9119 245 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS12355 19578709dfb7321a967d3d204197e433 335 Pfam PF13387 Domain of unknown function (DUF4105) 122 273 1.6E-47 T 09-03-2017 IPR025178 Domain of unknown function DUF4105 NA29_RS16925 8ec6fea2c5130b0bf84ec5b72ead9485 654 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 309 641 3.8E-140 T 09-03-2017 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 NA29_RS16925 8ec6fea2c5130b0bf84ec5b72ead9485 654 Gene3D G3DSA:1.50.10.20 32 297 2.4E-63 T 09-03-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NA29_RS16925 8ec6fea2c5130b0bf84ec5b72ead9485 654 Gene3D G3DSA:1.50.10.20 298 642 3.8E-111 T 09-03-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NA29_RS16925 8ec6fea2c5130b0bf84ec5b72ead9485 654 SUPERFAMILY SSF48239 35 304 6.8E-76 T 09-03-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NA29_RS16925 8ec6fea2c5130b0bf84ec5b72ead9485 654 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 10 641 5.9E-184 T 09-03-2017 IPR018333 Squalene cyclase GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 NA29_RS16925 8ec6fea2c5130b0bf84ec5b72ead9485 654 ProSitePatterns PS01074 Terpene synthases signature. 496 510 - T 09-03-2017 IPR002365 Terpene synthase, conserved site GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 NA29_RS16925 8ec6fea2c5130b0bf84ec5b72ead9485 654 SUPERFAMILY SSF48239 239 260 1.26E-100 T 09-03-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NA29_RS16925 8ec6fea2c5130b0bf84ec5b72ead9485 654 SUPERFAMILY SSF48239 305 642 1.26E-100 T 09-03-2017 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid NA29_RS16925 8ec6fea2c5130b0bf84ec5b72ead9485 654 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 10 297 1.3E-117 T 09-03-2017 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 NA29_RS16925 8ec6fea2c5130b0bf84ec5b72ead9485 654 TIGRFAM TIGR01507 hopene_cyclase: squalene-hopene cyclase 5 643 3.6E-223 T 09-03-2017 IPR006400 Squalene hopene cyclase GO:0016866|GO:0019746 KEGG: 00030+4.2.1.12|KEGG: 00909+4.2.1.129+5.4.99.17|MetaCyc: PWY-6098|MetaCyc: PWY-7072 NA29_RS12610 aeb609ab2a7674ab0e79eafa7491968b 340 ProDom PD024016 LIPOPOLYSACCHARIDE BIOSYNTHESIS CORE RFAZ WAAZ 64 292 2.0E-7 T 09-03-2017 NA29_RS12610 aeb609ab2a7674ab0e79eafa7491968b 340 Gene3D G3DSA:3.90.1480.10 63 297 1.9E-22 T 09-03-2017 NA29_RS21330 28370b75fd0a98d408d0bf94c4e9d1c5 641 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 289 1.5E-83 T 09-03-2017 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 NA29_RS21330 28370b75fd0a98d408d0bf94c4e9d1c5 641 Gene3D G3DSA:3.40.50.720 404 537 3.5E-35 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS21330 28370b75fd0a98d408d0bf94c4e9d1c5 641 Pfam PF02254 TrkA-N domain 408 520 3.4E-24 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 NA29_RS21330 28370b75fd0a98d408d0bf94c4e9d1c5 641 Pfam PF00999 Sodium/hydrogen exchanger family 14 377 8.7E-62 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 NA29_RS21330 28370b75fd0a98d408d0bf94c4e9d1c5 641 SUPERFAMILY SSF51735 407 536 7.34E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS21800 abe155f876613212073e3e2fffbd9fd9 196 Pfam PF01381 Helix-turn-helix 22 76 1.3E-16 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS21800 abe155f876613212073e3e2fffbd9fd9 196 SMART SM00530 21 76 1.6E-17 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS21800 abe155f876613212073e3e2fffbd9fd9 196 Gene3D G3DSA:2.60.120.10 118 194 2.1E-25 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS21800 abe155f876613212073e3e2fffbd9fd9 196 SUPERFAMILY SSF47413 17 82 1.98E-18 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS21800 abe155f876613212073e3e2fffbd9fd9 196 SUPERFAMILY SSF51182 69 194 1.01E-19 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS21800 abe155f876613212073e3e2fffbd9fd9 196 Gene3D G3DSA:1.10.260.40 18 117 1.7E-24 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS21800 abe155f876613212073e3e2fffbd9fd9 196 Pfam PF07883 Cupin domain 124 192 2.2E-9 T 09-03-2017 IPR013096 Cupin 2, conserved barrel NA29_RS17920 7bf95ef7bdf3969694b2a7aef8829126 326 Gene3D G3DSA:3.40.190.10 171 290 2.0E-40 T 09-03-2017 NA29_RS17920 7bf95ef7bdf3969694b2a7aef8829126 326 SUPERFAMILY SSF46785 1 86 2.83E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17920 7bf95ef7bdf3969694b2a7aef8829126 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.1E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS17920 7bf95ef7bdf3969694b2a7aef8829126 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.1E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS17920 7bf95ef7bdf3969694b2a7aef8829126 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.1E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS17920 7bf95ef7bdf3969694b2a7aef8829126 326 Gene3D G3DSA:1.10.10.10 1 85 7.0E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17920 7bf95ef7bdf3969694b2a7aef8829126 326 Pfam PF03466 LysR substrate binding domain 88 313 5.4E-37 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS17920 7bf95ef7bdf3969694b2a7aef8829126 326 SUPERFAMILY SSF53850 90 315 1.71E-33 T 09-03-2017 NA29_RS17920 7bf95ef7bdf3969694b2a7aef8829126 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.8E-23 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS17920 7bf95ef7bdf3969694b2a7aef8829126 326 Gene3D G3DSA:3.40.190.10 88 170 5.0E-28 T 09-03-2017 NA29_RS13225 a5ae43e6fa2291e75bed18a3e2ef8c43 269 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 230 256 - T 09-03-2017 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981 NA29_RS13225 a5ae43e6fa2291e75bed18a3e2ef8c43 269 Pfam PF01148 Cytidylyltransferase family 3 268 2.2E-55 T 09-03-2017 NA29_RS18275 60ebfc0c6cdc2ec634660358ce10836a 286 Gene3D G3DSA:3.30.450.40 97 269 1.6E-34 T 09-03-2017 IPR029016 GAF domain-like NA29_RS18275 60ebfc0c6cdc2ec634660358ce10836a 286 Gene3D G3DSA:1.10.10.10 17 88 4.0E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18275 60ebfc0c6cdc2ec634660358ce10836a 286 Pfam PF09339 IclR helix-turn-helix domain 31 78 4.8E-9 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS18275 60ebfc0c6cdc2ec634660358ce10836a 286 Pfam PF01614 Bacterial transcriptional regulator 147 266 7.7E-18 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS18275 60ebfc0c6cdc2ec634660358ce10836a 286 SMART SM00346 28 117 1.5E-10 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS18275 60ebfc0c6cdc2ec634660358ce10836a 286 SUPERFAMILY SSF46785 30 99 1.91E-9 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18275 60ebfc0c6cdc2ec634660358ce10836a 286 SUPERFAMILY SSF55781 101 273 3.79E-33 T 09-03-2017 IPR029016 GAF domain-like NA29_RS15960 65e368d8a024e2cb79e1046482944a86 374 Gene3D G3DSA:3.30.1150.10 243 334 4.0E-23 T 09-03-2017 NA29_RS15960 65e368d8a024e2cb79e1046482944a86 374 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 284 333 4.3E-8 T 09-03-2017 IPR006260 TonB, C-terminal GO:0006810 NA29_RS15960 65e368d8a024e2cb79e1046482944a86 374 SUPERFAMILY SSF74653 256 336 2.22E-16 T 09-03-2017 NA29_RS15960 65e368d8a024e2cb79e1046482944a86 374 Pfam PF13103 TonB C terminal 260 336 5.3E-20 T 09-03-2017 IPR006260 TonB, C-terminal GO:0006810 NA29_RS15960 65e368d8a024e2cb79e1046482944a86 374 TIGRFAM TIGR02794 tolA_full: protein TolA 23 331 1.1E-48 T 09-03-2017 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 NA29_RS10550 33a8dba92d89e5031c6499565da19cce 524 SMART SM00448 284 398 1.4E-18 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS10550 33a8dba92d89e5031c6499565da19cce 524 Gene3D G3DSA:3.40.50.2300 283 399 5.9E-23 T 09-03-2017 NA29_RS10550 33a8dba92d89e5031c6499565da19cce 524 SUPERFAMILY SSF52172 283 401 3.84E-24 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS10550 33a8dba92d89e5031c6499565da19cce 524 Pfam PF00072 Response regulator receiver domain 287 398 4.5E-18 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS10550 33a8dba92d89e5031c6499565da19cce 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 203 221 1.2E-8 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS10550 33a8dba92d89e5031c6499565da19cce 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 190 200 1.2E-8 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS10550 33a8dba92d89e5031c6499565da19cce 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 226 239 1.2E-8 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS10550 33a8dba92d89e5031c6499565da19cce 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 172 186 1.2E-8 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS10550 33a8dba92d89e5031c6499565da19cce 524 Pfam PF01627 Hpt domain 452 510 2.2E-6 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS10550 33a8dba92d89e5031c6499565da19cce 524 SMART SM00387 114 242 9.2E-23 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS10550 33a8dba92d89e5031c6499565da19cce 524 SUPERFAMILY SSF55874 56 241 1.83E-28 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS10550 33a8dba92d89e5031c6499565da19cce 524 Gene3D G3DSA:3.30.565.10 69 242 1.2E-30 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS10550 33a8dba92d89e5031c6499565da19cce 524 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 114 240 7.3E-17 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS10550 33a8dba92d89e5031c6499565da19cce 524 Gene3D G3DSA:1.20.120.160 446 510 2.2E-6 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS10550 33a8dba92d89e5031c6499565da19cce 524 SUPERFAMILY SSF47226 434 512 4.45E-8 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS10550 33a8dba92d89e5031c6499565da19cce 524 SUPERFAMILY SSF47226 381 394 4.45E-8 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS17755 19943b0aeaca0e0deb637792d1c2ac3d 260 Gene3D G3DSA:3.40.50.80 104 260 2.2E-36 T 09-03-2017 NA29_RS17755 19943b0aeaca0e0deb637792d1c2ac3d 260 SUPERFAMILY SSF52343 111 248 2.23E-31 T 09-03-2017 NA29_RS17755 19943b0aeaca0e0deb637792d1c2ac3d 260 Pfam PF00175 Oxidoreductase NAD-binding domain 119 234 2.1E-10 T 09-03-2017 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 NA29_RS17755 19943b0aeaca0e0deb637792d1c2ac3d 260 Pfam PF00970 Oxidoreductase FAD-binding domain 25 97 6.8E-9 T 09-03-2017 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 NA29_RS17755 19943b0aeaca0e0deb637792d1c2ac3d 260 SUPERFAMILY SSF63380 10 106 1.79E-22 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS17755 19943b0aeaca0e0deb637792d1c2ac3d 260 Gene3D G3DSA:2.40.30.10 9 100 3.3E-27 T 09-03-2017 NA29_RS17755 19943b0aeaca0e0deb637792d1c2ac3d 260 PRINTS PR00410 Phenol hydroxylase reductase family signature 118 137 1.1E-6 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS17755 19943b0aeaca0e0deb637792d1c2ac3d 260 PRINTS PR00410 Phenol hydroxylase reductase family signature 38 50 1.1E-6 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS17755 19943b0aeaca0e0deb637792d1c2ac3d 260 PRINTS PR00410 Phenol hydroxylase reductase family signature 221 229 1.1E-6 T 09-03-2017 IPR001221 Phenol hydroxylase reductase GO:0055114 NA29_RS06295 357332ef4821b86e80c32d42474cf90e 217 Gene3D G3DSA:1.10.357.10 71 217 1.1E-18 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS06295 357332ef4821b86e80c32d42474cf90e 217 SUPERFAMILY SSF46689 13 82 3.13E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS06295 357332ef4821b86e80c32d42474cf90e 217 Gene3D G3DSA:1.10.10.60 10 70 1.5E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS06295 357332ef4821b86e80c32d42474cf90e 217 SUPERFAMILY SSF48498 102 217 9.12E-17 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS06295 357332ef4821b86e80c32d42474cf90e 217 Pfam PF13305 WHG domain 106 194 8.7E-17 T 09-03-2017 IPR025996 WHG domain NA29_RS06295 357332ef4821b86e80c32d42474cf90e 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 4.9E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS21610 e625883973cfb90b77279b825c199b4c 408 Pfam PF01943 Polysaccharide biosynthesis protein 11 273 6.2E-13 T 09-03-2017 IPR002797 Polysaccharide biosynthesis protein GO:0016020 NA29_RS13565 d16ecf8da193cd718592f1500d81d2f1 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.9E-21 T 09-03-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS13565 d16ecf8da193cd718592f1500d81d2f1 150 SUPERFAMILY SSF55653 60 147 3.4E-25 T 09-03-2017 IPR020069 Ribosomal protein L9, C-terminal NA29_RS13565 d16ecf8da193cd718592f1500d81d2f1 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 3.1E-44 T 09-03-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS13565 d16ecf8da193cd718592f1500d81d2f1 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.083 T 09-03-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS13565 d16ecf8da193cd718592f1500d81d2f1 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 4.9E-25 T 09-03-2017 IPR020069 Ribosomal protein L9, C-terminal NA29_RS13565 d16ecf8da193cd718592f1500d81d2f1 150 SUPERFAMILY SSF55658 1 56 7.5E-18 T 09-03-2017 IPR009027 Ribosomal protein L9/RNase H1, N-terminal NA29_RS13565 d16ecf8da193cd718592f1500d81d2f1 150 Gene3D G3DSA:3.10.430.100 61 148 1.7E-26 T 09-03-2017 IPR020069 Ribosomal protein L9, C-terminal NA29_RS13565 d16ecf8da193cd718592f1500d81d2f1 150 Gene3D G3DSA:3.40.5.10 1 52 5.6E-24 T 09-03-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS13565 d16ecf8da193cd718592f1500d81d2f1 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 09-03-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS14485 8721e1b3c3943457f6746fc7347d6679 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 190 1.1E-8 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS14485 8721e1b3c3943457f6746fc7347d6679 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 206 1.1E-8 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS14485 8721e1b3c3943457f6746fc7347d6679 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 218 1.1E-8 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS14485 8721e1b3c3943457f6746fc7347d6679 241 SMART SM00421 173 230 1.5E-16 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS14485 8721e1b3c3943457f6746fc7347d6679 241 SUPERFAMILY SSF46894 169 235 1.09E-16 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS14485 8721e1b3c3943457f6746fc7347d6679 241 Pfam PF00196 Bacterial regulatory proteins, luxR family 177 229 5.7E-12 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS14485 8721e1b3c3943457f6746fc7347d6679 241 SUPERFAMILY SSF52172 2 127 1.93E-6 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS14485 8721e1b3c3943457f6746fc7347d6679 241 Gene3D G3DSA:1.10.10.10 169 234 1.9E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03880 16110edddff18a4070b959b278ed9e08 580 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 357 552 6.8E-52 T 09-03-2017 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 NA29_RS03880 16110edddff18a4070b959b278ed9e08 580 Gene3D G3DSA:3.40.50.410 370 546 8.3E-7 T 09-03-2017 IPR002035 von Willebrand factor, type A NA29_RS03880 16110edddff18a4070b959b278ed9e08 580 SUPERFAMILY SSF53300 370 562 2.67E-9 T 09-03-2017 IPR002035 von Willebrand factor, type A NA29_RS03880 16110edddff18a4070b959b278ed9e08 580 Pfam PF06213 Cobalamin biosynthesis protein CobT 20 234 1.8E-30 T 09-03-2017 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 NA29_RS17085 777bcf57109cd470d192bcb30bee53e5 178 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 59 98 1.6E-7 T 09-03-2017 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS17085 777bcf57109cd470d192bcb30bee53e5 178 Pfam PF02627 Carboxymuconolactone decarboxylase family 42 106 4.6E-8 T 09-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS17085 777bcf57109cd470d192bcb30bee53e5 178 SUPERFAMILY SSF69118 1 175 7.2E-42 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS17085 777bcf57109cd470d192bcb30bee53e5 178 Gene3D G3DSA:1.20.1290.10 1 89 1.1E-29 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS17085 777bcf57109cd470d192bcb30bee53e5 178 Gene3D G3DSA:1.20.1290.10 139 175 1.1E-29 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS12250 da67f6cc43361b6d667abfc3d7bb0295 284 Gene3D G3DSA:3.40.50.150 61 177 2.0E-6 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS12250 da67f6cc43361b6d667abfc3d7bb0295 284 Pfam PF13679 Methyltransferase domain 34 174 6.5E-44 T 09-03-2017 IPR025714 Methyltransferase domain NA29_RS12250 da67f6cc43361b6d667abfc3d7bb0295 284 SUPERFAMILY SSF53335 40 180 6.97E-14 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS08185 b403af2366103983b8f2e4885fc466cc 262 SUPERFAMILY SSF51735 9 234 2.88E-24 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS08185 b403af2366103983b8f2e4885fc466cc 262 Gene3D G3DSA:3.40.50.720 9 230 2.2E-28 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS08185 b403af2366103983b8f2e4885fc466cc 262 Pfam PF13460 NAD(P)H-binding 14 228 2.3E-27 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS04190 0f60dd193f2488460ce4a2b98ef5d7bb 324 Gene3D G3DSA:1.10.10.60 266 316 7.2E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS04190 0f60dd193f2488460ce4a2b98ef5d7bb 324 SMART SM00342 228 312 6.3E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS04190 0f60dd193f2488460ce4a2b98ef5d7bb 324 Gene3D G3DSA:3.40.50.880 6 194 1.4E-53 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS04190 0f60dd193f2488460ce4a2b98ef5d7bb 324 SUPERFAMILY SSF46689 265 316 2.82E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS04190 0f60dd193f2488460ce4a2b98ef5d7bb 324 SUPERFAMILY SSF46689 212 262 1.65E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS04190 0f60dd193f2488460ce4a2b98ef5d7bb 324 Gene3D G3DSA:1.10.10.60 206 265 2.7E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS04190 0f60dd193f2488460ce4a2b98ef5d7bb 324 Pfam PF01965 DJ-1/PfpI family 46 173 1.2E-18 T 09-03-2017 IPR002818 DJ-1/PfpI NA29_RS04190 0f60dd193f2488460ce4a2b98ef5d7bb 324 Pfam PF12833 Helix-turn-helix domain 234 313 7.8E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS04190 0f60dd193f2488460ce4a2b98ef5d7bb 324 SUPERFAMILY SSF52317 6 194 5.4E-50 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS05250 c92641a7fd4edda5886a8b0695dc78e8 324 Gene3D G3DSA:1.10.3720.10 88 317 1.4E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS05250 c92641a7fd4edda5886a8b0695dc78e8 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 8.8E-44 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS05250 c92641a7fd4edda5886a8b0695dc78e8 324 SUPERFAMILY SSF161098 89 305 5.89E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS12050 2bdb6dceb9554124e35c4dd211701272 157 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 13 72 2.3E-6 T 09-03-2017 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 NA29_RS12050 2bdb6dceb9554124e35c4dd211701272 157 Gene3D G3DSA:2.30.110.10 9 131 2.0E-16 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS12050 2bdb6dceb9554124e35c4dd211701272 157 SUPERFAMILY SSF50475 9 149 1.65E-18 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS15725 4892ba16212f76ac861875e55a7d884b 83 Gene3D G3DSA:3.30.1320.10 1 77 2.5E-32 T 09-03-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS15725 4892ba16212f76ac861875e55a7d884b 83 Pfam PF00886 Ribosomal protein S16 8 68 2.9E-24 T 09-03-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS15725 4892ba16212f76ac861875e55a7d884b 83 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 09-03-2017 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS15725 4892ba16212f76ac861875e55a7d884b 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.092 T 09-03-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS15725 4892ba16212f76ac861875e55a7d884b 83 SUPERFAMILY SSF54565 1 76 7.19E-29 T 09-03-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS15725 4892ba16212f76ac861875e55a7d884b 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 77 5.6E-27 T 09-03-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS01540 342471ea73e2b1cda8a79423ad6de6dc 131 SMART SM00905 16 127 3.9E-28 T 09-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 NA29_RS01540 342471ea73e2b1cda8a79423ad6de6dc 131 SUPERFAMILY SSF55620 12 126 2.17E-27 T 09-03-2017 NA29_RS01540 342471ea73e2b1cda8a79423ad6de6dc 131 TIGRFAM TIGR00526 folB_dom: FolB domain 17 124 6.7E-13 T 09-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 NA29_RS01540 342471ea73e2b1cda8a79423ad6de6dc 131 Pfam PF02152 Dihydroneopterin aldolase 17 125 8.7E-24 T 09-03-2017 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 NA29_RS01540 342471ea73e2b1cda8a79423ad6de6dc 131 Gene3D G3DSA:3.30.1130.10 15 126 1.7E-30 T 09-03-2017 NA29_RS01440 3f3fdb56f92d1d46383640fa95550f3e 418 SUPERFAMILY SSF53822 32 409 2.46E-89 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS01440 3f3fdb56f92d1d46383640fa95550f3e 418 Gene3D G3DSA:3.40.50.2300 148 347 4.2E-74 T 09-03-2017 NA29_RS01440 3f3fdb56f92d1d46383640fa95550f3e 418 Pfam PF13433 Periplasmic binding protein domain 33 407 4.9E-173 T 09-03-2017 NA29_RS01440 3f3fdb56f92d1d46383640fa95550f3e 418 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 33 405 5.4E-181 T 09-03-2017 IPR017777 ABC transporter, urea, substrate-binding, UrtA NA29_RS23755 1f7896345d801f4372d43cff2e2ddec2 121 Pfam PF00416 Ribosomal protein S13/S18 63 108 8.8E-17 T 09-03-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23755 1f7896345d801f4372d43cff2e2ddec2 121 Pfam PF00416 Ribosomal protein S13/S18 3 62 3.6E-14 T 09-03-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23755 1f7896345d801f4372d43cff2e2ddec2 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 26.463 T 09-03-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23755 1f7896345d801f4372d43cff2e2ddec2 121 PIRSF PIRSF002134 1 121 1.2E-40 T 09-03-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23755 1f7896345d801f4372d43cff2e2ddec2 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 6.4E-52 T 09-03-2017 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23755 1f7896345d801f4372d43cff2e2ddec2 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 09-03-2017 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS23755 1f7896345d801f4372d43cff2e2ddec2 121 SUPERFAMILY SSF46946 2 114 6.67E-44 T 09-03-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 NA29_RS23755 1f7896345d801f4372d43cff2e2ddec2 121 Gene3D G3DSA:1.10.8.50 1 71 3.1E-28 T 09-03-2017 NA29_RS23755 1f7896345d801f4372d43cff2e2ddec2 121 Gene3D G3DSA:4.10.910.10 73 118 1.1E-24 T 09-03-2017 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 NA29_RS09920 47d5bb9bf8412c0d14469ae7cdf4fbb9 275 Gene3D G3DSA:1.25.40.10 40 218 2.8E-11 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS09920 47d5bb9bf8412c0d14469ae7cdf4fbb9 275 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 7 248 37.429 T 09-03-2017 IPR017689 Outer membrane protein assembly factor BamD NA29_RS09920 47d5bb9bf8412c0d14469ae7cdf4fbb9 275 Pfam PF13525 Outer membrane lipoprotein 38 240 8.7E-60 T 09-03-2017 NA29_RS09920 47d5bb9bf8412c0d14469ae7cdf4fbb9 275 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 252 7.5E-82 T 09-03-2017 IPR017689 Outer membrane protein assembly factor BamD NA29_RS09920 47d5bb9bf8412c0d14469ae7cdf4fbb9 275 SUPERFAMILY SSF48452 40 217 1.2E-8 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS15105 f9d6f0d3b9931d8f20d12e3188f3d358 657 Gene3D G3DSA:3.30.450.20 80 165 5.5E-17 T 09-03-2017 NA29_RS15105 f9d6f0d3b9931d8f20d12e3188f3d358 657 SUPERFAMILY SSF158472 297 347 3.4E-6 T 09-03-2017 NA29_RS15105 f9d6f0d3b9931d8f20d12e3188f3d358 657 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 486 648 4.5E-41 T 09-03-2017 IPR000160 GGDEF domain NA29_RS15105 f9d6f0d3b9931d8f20d12e3188f3d358 657 SMART SM00304 297 350 5.1E-5 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS15105 f9d6f0d3b9931d8f20d12e3188f3d358 657 SMART SM00267 476 649 3.8E-54 T 09-03-2017 IPR000160 GGDEF domain NA29_RS15105 f9d6f0d3b9931d8f20d12e3188f3d358 657 Gene3D G3DSA:3.30.70.270 489 650 6.2E-51 T 09-03-2017 NA29_RS15105 f9d6f0d3b9931d8f20d12e3188f3d358 657 Pfam PF08448 PAS fold 371 477 3.4E-11 T 09-03-2017 IPR013656 PAS fold-4 NA29_RS15105 f9d6f0d3b9931d8f20d12e3188f3d358 657 Pfam PF00990 Diguanylate cyclase, GGDEF domain 487 644 5.8E-43 T 09-03-2017 IPR000160 GGDEF domain NA29_RS15105 f9d6f0d3b9931d8f20d12e3188f3d358 657 SUPERFAMILY SSF55073 492 648 2.28E-42 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS15105 f9d6f0d3b9931d8f20d12e3188f3d358 657 Gene3D G3DSA:3.30.450.20 356 474 3.8E-16 T 09-03-2017 NA29_RS15105 f9d6f0d3b9931d8f20d12e3188f3d358 657 SUPERFAMILY SSF55785 354 474 1.52E-13 T 09-03-2017 IPR000014 PAS domain NA29_RS15105 f9d6f0d3b9931d8f20d12e3188f3d358 657 Gene3D G3DSA:3.30.450.20 166 274 5.4E-4 T 09-03-2017 NA29_RS15105 f9d6f0d3b9931d8f20d12e3188f3d358 657 Pfam PF00672 HAMP domain 278 346 2.4E-14 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS11795 e04098c18bf17239abb02520a020b480 447 ProSitePatterns PS00217 Sugar transport proteins signature 2. 142 167 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS11795 e04098c18bf17239abb02520a020b480 447 SUPERFAMILY SSF103473 27 439 1.11E-61 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS11795 e04098c18bf17239abb02520a020b480 447 Pfam PF00083 Sugar (and other) transporter 36 237 4.0E-24 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS11795 e04098c18bf17239abb02520a020b480 447 Pfam PF07690 Major Facilitator Superfamily 269 437 2.1E-8 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS11795 e04098c18bf17239abb02520a020b480 447 Gene3D G3DSA:1.20.1250.20 255 439 1.4E-17 T 09-03-2017 NA29_RS11795 e04098c18bf17239abb02520a020b480 447 Gene3D G3DSA:1.20.1250.20 27 232 7.4E-24 T 09-03-2017 NA29_RS21680 d0e8e1ac48e73855f8dd9bba6ce1d246 590 Pfam PF15864 Protein glycosylation ligase 161 185 3.7E-10 T 09-03-2017 IPR031726 Protein glycosylation ligase domain NA29_RS21680 d0e8e1ac48e73855f8dd9bba6ce1d246 590 Pfam PF04932 O-Antigen ligase 201 354 7.5E-19 T 09-03-2017 IPR007016 O-antigen ligase-related NA29_RS21680 d0e8e1ac48e73855f8dd9bba6ce1d246 590 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 376 532 4.6E-30 T 09-03-2017 IPR021797 Virulence factor membrane-bound polymerase, C-terminal NA29_RS02445 29e39e3b53835505dbaf81eec275c1d3 86 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 1.6E-32 T 09-03-2017 IPR011900 Glutaredoxin, GrxC GO:0045454 NA29_RS02445 29e39e3b53835505dbaf81eec275c1d3 86 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 09-03-2017 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 NA29_RS02445 29e39e3b53835505dbaf81eec275c1d3 86 Pfam PF00462 Glutaredoxin 4 64 2.0E-20 T 09-03-2017 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 NA29_RS02445 29e39e3b53835505dbaf81eec275c1d3 86 PRINTS PR00160 Glutaredoxin signature 61 74 4.0E-15 T 09-03-2017 IPR014025 Glutaredoxin subgroup NA29_RS02445 29e39e3b53835505dbaf81eec275c1d3 86 PRINTS PR00160 Glutaredoxin signature 4 22 4.0E-15 T 09-03-2017 IPR014025 Glutaredoxin subgroup NA29_RS02445 29e39e3b53835505dbaf81eec275c1d3 86 PRINTS PR00160 Glutaredoxin signature 47 60 4.0E-15 T 09-03-2017 IPR014025 Glutaredoxin subgroup NA29_RS02445 29e39e3b53835505dbaf81eec275c1d3 86 SUPERFAMILY SSF52833 1 84 1.14E-25 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS02445 29e39e3b53835505dbaf81eec275c1d3 86 Gene3D G3DSA:3.40.30.10 3 85 4.9E-27 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS19865 e8544f8484b34a26a5c0d806938c240c 402 Gene3D G3DSA:3.40.50.2300 52 252 1.1E-67 T 09-03-2017 NA29_RS19865 e8544f8484b34a26a5c0d806938c240c 402 Pfam PF13458 Periplasmic binding protein 52 378 1.8E-61 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS19865 e8544f8484b34a26a5c0d806938c240c 402 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 283 301 9.5E-5 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS19865 e8544f8484b34a26a5c0d806938c240c 402 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 52 68 9.5E-5 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS19865 e8544f8484b34a26a5c0d806938c240c 402 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 359 374 9.5E-5 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS19865 e8544f8484b34a26a5c0d806938c240c 402 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 74 90 9.5E-5 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS19865 e8544f8484b34a26a5c0d806938c240c 402 SUPERFAMILY SSF53822 52 395 3.08E-96 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS17390 7b69e99049503af66689fbf52e3c82f0 511 SUPERFAMILY SSF51905 467 509 8.74E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17390 7b69e99049503af66689fbf52e3c82f0 511 SUPERFAMILY SSF51905 38 364 8.74E-44 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17390 7b69e99049503af66689fbf52e3c82f0 511 Gene3D G3DSA:3.90.660.10 68 161 5.8E-37 T 09-03-2017 NA29_RS17390 7b69e99049503af66689fbf52e3c82f0 511 Gene3D G3DSA:3.90.660.10 350 446 5.8E-37 T 09-03-2017 NA29_RS17390 7b69e99049503af66689fbf52e3c82f0 511 Pfam PF01593 Flavin containing amine oxidoreductase 49 500 2.2E-43 T 09-03-2017 IPR002937 Amine oxidase GO:0016491|GO:0055114 NA29_RS17390 7b69e99049503af66689fbf52e3c82f0 511 SUPERFAMILY SSF54373 346 456 2.55E-17 T 09-03-2017 NA29_RS17390 7b69e99049503af66689fbf52e3c82f0 511 Gene3D G3DSA:3.50.50.60 40 67 2.3E-27 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17390 7b69e99049503af66689fbf52e3c82f0 511 Gene3D G3DSA:3.50.50.60 447 505 2.3E-27 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS17390 7b69e99049503af66689fbf52e3c82f0 511 Gene3D G3DSA:3.50.50.60 266 349 2.3E-27 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08150 e7cff06b8fdf1e7e808dee5faf03e97d 266 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 17 266 4.5E-72 T 09-03-2017 IPR004872 Lipoprotein NlpA family NA29_RS08150 e7cff06b8fdf1e7e808dee5faf03e97d 266 Gene3D G3DSA:3.40.190.10 31 158 3.3E-54 T 09-03-2017 NA29_RS08150 e7cff06b8fdf1e7e808dee5faf03e97d 266 Pfam PF03180 NLPA lipoprotein 31 266 5.0E-88 T 09-03-2017 IPR004872 Lipoprotein NlpA family NA29_RS08150 e7cff06b8fdf1e7e808dee5faf03e97d 266 SUPERFAMILY SSF53850 31 266 5.6E-82 T 09-03-2017 NA29_RS08150 e7cff06b8fdf1e7e808dee5faf03e97d 266 PIRSF PIRSF002854 1 266 3.2E-95 T 09-03-2017 IPR004872 Lipoprotein NlpA family NA29_RS02590 c6957f734401ca356ca1340a4928c11f 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 360 5.7E-102 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 NA29_RS02590 c6957f734401ca356ca1340a4928c11f 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 4.4E-148 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 NA29_RS02590 c6957f734401ca356ca1340a4928c11f 378 PIRSF PIRSF000267 1 377 1.9E-118 T 09-03-2017 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 NA29_RS05855 b294d2797e6d04723c77ab906bb7d9e7 397 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 4.4E-109 T 09-03-2017 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NA29_RS05855 b294d2797e6d04723c77ab906bb7d9e7 397 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 392 54.807 T 09-03-2017 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NA29_RS05855 b294d2797e6d04723c77ab906bb7d9e7 397 Pfam PF07055 Enoyl reductase FAD binding domain 323 386 1.5E-29 T 09-03-2017 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NA29_RS05855 b294d2797e6d04723c77ab906bb7d9e7 397 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 1.7E-38 T 09-03-2017 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 NA29_RS22220 23e73a558824c15af9d8264ac664d7e3 148 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 143 1.8E-61 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NA29_RS22220 23e73a558824c15af9d8264ac664d7e3 148 SUPERFAMILY SSF52304 4 145 3.66E-64 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NA29_RS22220 23e73a558824c15af9d8264ac664d7e3 148 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 09-03-2017 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NA29_RS22220 23e73a558824c15af9d8264ac664d7e3 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 6 142 2.0E-64 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NA29_RS22220 23e73a558824c15af9d8264ac664d7e3 148 Pfam PF01220 Dehydroquinase class II 4 141 1.3E-62 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NA29_RS22220 23e73a558824c15af9d8264ac664d7e3 148 Gene3D G3DSA:3.40.50.9100 3 145 1.3E-69 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NA29_RS22220 23e73a558824c15af9d8264ac664d7e3 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 75.257 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NA29_RS22220 23e73a558824c15af9d8264ac664d7e3 148 PIRSF PIRSF001399 1 147 1.6E-61 T 09-03-2017 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 NA29_RS15735 7b9454bfe26bd44bdb0e885650083afd 270 Pfam PF03724 META domain 59 163 2.9E-23 T 09-03-2017 IPR005184 Domain of unknown function DUF306, Meta/HslJ NA29_RS15735 7b9454bfe26bd44bdb0e885650083afd 270 Pfam PF14302 Domain of unknown function (DUF4377) 190 265 3.3E-23 T 09-03-2017 IPR025485 Domain of unknown function DUF4377 NA29_RS06635 0eca1f070a22f646585d5a2dcfe6cee8 144 Gene3D G3DSA:3.30.1330.40 11 141 4.2E-37 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS06635 0eca1f070a22f646585d5a2dcfe6cee8 144 SUPERFAMILY SSF55298 13 141 3.77E-32 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS06635 0eca1f070a22f646585d5a2dcfe6cee8 144 Pfam PF01042 Endoribonuclease L-PSP 17 139 1.7E-25 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family NA29_RS21230 9408e569a882ae67c5b00791b217dfd7 448 Gene3D G3DSA:1.20.1250.20 36 239 1.8E-19 T 09-03-2017 NA29_RS21230 9408e569a882ae67c5b00791b217dfd7 448 Gene3D G3DSA:1.20.1250.20 255 445 1.0E-21 T 09-03-2017 NA29_RS21230 9408e569a882ae67c5b00791b217dfd7 448 ProSitePatterns PS00217 Sugar transport proteins signature 2. 144 169 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS21230 9408e569a882ae67c5b00791b217dfd7 448 SUPERFAMILY SSF103473 31 447 1.09E-62 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS21230 9408e569a882ae67c5b00791b217dfd7 448 Pfam PF00083 Sugar (and other) transporter 36 247 3.2E-20 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS21230 9408e569a882ae67c5b00791b217dfd7 448 Pfam PF07690 Major Facilitator Superfamily 275 440 8.5E-14 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS14720 3fdb0eb07fbf2a72cee007241598d99d 121 Pfam PF01588 Putative tRNA binding domain 24 118 7.9E-16 T 09-03-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 NA29_RS14720 3fdb0eb07fbf2a72cee007241598d99d 121 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 16 120 1.9E-45 T 09-03-2017 IPR008231 Probable chaperone CsaA NA29_RS14720 3fdb0eb07fbf2a72cee007241598d99d 121 Gene3D G3DSA:2.40.50.140 12 120 4.3E-35 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS14720 3fdb0eb07fbf2a72cee007241598d99d 121 SUPERFAMILY SSF50249 13 120 4.28E-31 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS10820 d078469e28333a16ddc1bffc473772ba 399 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 285 7.3E-28 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NA29_RS10820 d078469e28333a16ddc1bffc473772ba 399 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 48 291 5.9E-47 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NA29_RS10820 d078469e28333a16ddc1bffc473772ba 399 Gene3D G3DSA:2.40.50.100 179 210 5.9E-14 T 09-03-2017 NA29_RS10820 d078469e28333a16ddc1bffc473772ba 399 Gene3D G3DSA:2.40.50.100 75 104 5.9E-14 T 09-03-2017 NA29_RS10820 d078469e28333a16ddc1bffc473772ba 399 SUPERFAMILY SSF111369 61 288 3.27E-14 T 09-03-2017 NA29_RS11490 2d8a74ae40737131c3ea92f432d15fae 306 SUPERFAMILY SSF53850 92 298 1.3E-32 T 09-03-2017 NA29_RS11490 2d8a74ae40737131c3ea92f432d15fae 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 1.1E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11490 2d8a74ae40737131c3ea92f432d15fae 306 Gene3D G3DSA:3.40.190.10 97 179 8.8E-23 T 09-03-2017 NA29_RS11490 2d8a74ae40737131c3ea92f432d15fae 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 8.7E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11490 2d8a74ae40737131c3ea92f432d15fae 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 8.7E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11490 2d8a74ae40737131c3ea92f432d15fae 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 8.7E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11490 2d8a74ae40737131c3ea92f432d15fae 306 Pfam PF03466 LysR substrate binding domain 91 295 2.1E-31 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS11490 2d8a74ae40737131c3ea92f432d15fae 306 Gene3D G3DSA:3.40.190.10 180 260 7.8E-24 T 09-03-2017 NA29_RS11490 2d8a74ae40737131c3ea92f432d15fae 306 Gene3D G3DSA:1.10.10.10 6 83 1.9E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11490 2d8a74ae40737131c3ea92f432d15fae 306 SUPERFAMILY SSF46785 3 83 9.33E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18590 72944da4ff891890ae464a2cacba495a 305 Pfam PF00294 pfkB family carbohydrate kinase 6 294 7.9E-34 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB NA29_RS18590 72944da4ff891890ae464a2cacba495a 305 Gene3D G3DSA:3.40.1190.20 5 304 9.4E-48 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS18590 72944da4ff891890ae464a2cacba495a 305 SUPERFAMILY SSF53613 5 302 3.59E-49 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS22430 7ef30ced2136e46235be559045fed0dc 410 Gene3D G3DSA:3.30.420.40 209 233 7.1E-34 T 09-03-2017 NA29_RS22430 7ef30ced2136e46235be559045fed0dc 410 Gene3D G3DSA:3.30.420.40 297 351 7.1E-34 T 09-03-2017 NA29_RS22430 7ef30ced2136e46235be559045fed0dc 410 SMART SM00842 9 195 3.1E-107 T 09-03-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 NA29_RS22430 7ef30ced2136e46235be559045fed0dc 410 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 376 2.6E-150 T 09-03-2017 IPR020823 Cell division protein FtsA GO:0007049 NA29_RS22430 7ef30ced2136e46235be559045fed0dc 410 SUPERFAMILY SSF53067 197 376 9.34E-51 T 09-03-2017 NA29_RS22430 7ef30ced2136e46235be559045fed0dc 410 PIRSF PIRSF003101 1 410 3.6E-152 T 09-03-2017 IPR020823 Cell division protein FtsA GO:0007049 NA29_RS22430 7ef30ced2136e46235be559045fed0dc 410 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 410 31.515 T 09-03-2017 IPR020823 Cell division protein FtsA GO:0007049 NA29_RS22430 7ef30ced2136e46235be559045fed0dc 410 Gene3D G3DSA:3.30.1490.110 85 156 6.6E-18 T 09-03-2017 NA29_RS22430 7ef30ced2136e46235be559045fed0dc 410 Gene3D G3DSA:3.30.420.40 157 208 8.7E-26 T 09-03-2017 NA29_RS22430 7ef30ced2136e46235be559045fed0dc 410 Gene3D G3DSA:3.30.420.40 3 82 8.7E-26 T 09-03-2017 NA29_RS22430 7ef30ced2136e46235be559045fed0dc 410 Gene3D G3DSA:3.90.640.10 234 296 2.4E-19 T 09-03-2017 NA29_RS22430 7ef30ced2136e46235be559045fed0dc 410 SUPERFAMILY SSF53067 7 196 7.25E-63 T 09-03-2017 NA29_RS22430 7ef30ced2136e46235be559045fed0dc 410 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 7.9E-33 T 09-03-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 NA29_RS22430 7ef30ced2136e46235be559045fed0dc 410 Pfam PF14450 Cell division protein FtsA 206 373 1.9E-25 T 09-03-2017 NA29_RS22430 7ef30ced2136e46235be559045fed0dc 410 Pfam PF14450 Cell division protein FtsA 10 193 3.4E-11 T 09-03-2017 NA29_RS10555 0ca41cb103458559ca0c59cb5b57b4f9 223 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 21 223 2.5E-52 T 09-03-2017 IPR005744 Hly-III GO:0016021|GO:0019835 NA29_RS10555 0ca41cb103458559ca0c59cb5b57b4f9 223 Pfam PF03006 Haemolysin-III related 18 216 3.2E-37 T 09-03-2017 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 NA29_RS05965 51083d777dcf2816d933dbb02231b975 264 Pfam PF13531 Bacterial extracellular solute-binding protein 33 258 9.4E-27 T 09-03-2017 NA29_RS05965 51083d777dcf2816d933dbb02231b975 264 Gene3D G3DSA:3.40.190.10 30 167 2.6E-10 T 09-03-2017 NA29_RS05965 51083d777dcf2816d933dbb02231b975 264 SUPERFAMILY SSF53850 31 259 2.17E-34 T 09-03-2017 NA29_RS24275 0d76c223db16754075aa72c5e689c9fb 572 Gene3D G3DSA:3.40.50.1820 110 223 6.3E-4 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS24275 0d76c223db16754075aa72c5e689c9fb 572 SUPERFAMILY SSF53474 377 567 3.93E-19 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS24275 0d76c223db16754075aa72c5e689c9fb 572 Pfam PF06057 Bacterial virulence protein (VirJ) 384 572 8.6E-77 T 09-03-2017 IPR010333 Bacterial virulence NA29_RS24275 0d76c223db16754075aa72c5e689c9fb 572 Gene3D G3DSA:3.40.50.1820 424 490 1.7E-7 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS24275 0d76c223db16754075aa72c5e689c9fb 572 SUPERFAMILY SSF53474 256 273 5.41E-7 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS24275 0d76c223db16754075aa72c5e689c9fb 572 SUPERFAMILY SSF53474 110 229 5.41E-7 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS11240 e90506a6b00247c6c32c3f78e8078160 279 SUPERFAMILY SSF51182 10 272 1.26E-83 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS11240 e90506a6b00247c6c32c3f78e8078160 279 Pfam PF07883 Cupin domain 195 261 8.5E-9 T 09-03-2017 IPR013096 Cupin 2, conserved barrel NA29_RS11240 e90506a6b00247c6c32c3f78e8078160 279 Pfam PF05899 Protein of unknown function (DUF861) 63 145 4.5E-10 T 09-03-2017 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 NA29_RS11240 e90506a6b00247c6c32c3f78e8078160 279 TIGRFAM TIGR03214 ura-cupin: putative allantoin catabolism protein 6 272 4.6E-120 T 09-03-2017 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 NA29_RS11240 e90506a6b00247c6c32c3f78e8078160 279 Gene3D G3DSA:2.60.120.10 6 271 7.6E-114 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS10700 93c74da265a7f8ac06c00e33c639a6fe 453 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 3 451 59.292 T 09-03-2017 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 NA29_RS10700 93c74da265a7f8ac06c00e33c639a6fe 453 Gene3D G3DSA:3.75.10.20 5 451 7.8E-217 T 09-03-2017 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 NA29_RS10700 93c74da265a7f8ac06c00e33c639a6fe 453 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 5 450 1.1E-227 T 09-03-2017 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 NA29_RS10700 93c74da265a7f8ac06c00e33c639a6fe 453 SUPERFAMILY SSF55909 5 451 2.35E-200 T 09-03-2017 NA29_RS10700 93c74da265a7f8ac06c00e33c639a6fe 453 Pfam PF04996 Succinylarginine dihydrolase 5 450 1.3E-215 T 09-03-2017 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 NA29_RS07300 8aa0a66e5764b2d45a744735029adb27 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 312 1.1E-17 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS07300 8aa0a66e5764b2d45a744735029adb27 324 Gene3D G3DSA:1.10.3720.10 31 321 6.8E-37 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS07300 8aa0a66e5764b2d45a744735029adb27 324 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 25 317 2.0E-90 T 09-03-2017 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 NA29_RS07300 8aa0a66e5764b2d45a744735029adb27 324 SUPERFAMILY SSF161098 34 310 2.49E-32 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16195 fe3f68821f2983608170178f0788416c 562 Pfam PF03929 PepSY-associated TM region 22 388 6.2E-56 T 09-03-2017 IPR005625 PepSY-associated TM protein NA29_RS09695 4bcba44de0826e25237f1c6d383cdc01 257 Pfam PF01925 Sulfite exporter TauE/SafE 18 250 2.3E-27 T 09-03-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 NA29_RS24520 d64fba099f6e3dc28bef23d4e566e28c 265 Pfam PF04972 BON domain 135 199 1.1E-9 T 09-03-2017 IPR007055 BON domain NA29_RS24520 d64fba099f6e3dc28bef23d4e566e28c 265 Pfam PF04972 BON domain 59 125 9.3E-13 T 09-03-2017 IPR007055 BON domain NA29_RS24520 d64fba099f6e3dc28bef23d4e566e28c 265 SMART SM00749 61 126 32.0 T 09-03-2017 IPR014004 Transport-associated and nodulation domain, bacteria NA29_RS24520 d64fba099f6e3dc28bef23d4e566e28c 265 SMART SM00749 140 203 0.0042 T 09-03-2017 IPR014004 Transport-associated and nodulation domain, bacteria NA29_RS03440 c31d9eb45f088940f8a75141d7d7cf56 290 SUPERFAMILY SSF53850 97 286 3.69E-24 T 09-03-2017 NA29_RS03440 c31d9eb45f088940f8a75141d7d7cf56 290 Gene3D G3DSA:3.40.190.10 88 200 7.4E-12 T 09-03-2017 NA29_RS03440 c31d9eb45f088940f8a75141d7d7cf56 290 Gene3D G3DSA:1.10.10.10 10 87 8.7E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03440 c31d9eb45f088940f8a75141d7d7cf56 290 SUPERFAMILY SSF46785 10 110 2.5E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03440 c31d9eb45f088940f8a75141d7d7cf56 290 Pfam PF03466 LysR substrate binding domain 96 283 1.5E-22 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS03440 c31d9eb45f088940f8a75141d7d7cf56 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 7.9E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS02205 74f51183086d40f3e230585ec66e2bd0 167 Gene3D G3DSA:3.40.50.620 33 152 9.5E-34 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS02205 74f51183086d40f3e230585ec66e2bd0 167 Pfam PF01467 Cytidylyltransferase-like 36 130 7.7E-15 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NA29_RS02205 74f51183086d40f3e230585ec66e2bd0 167 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 34 100 4.9E-13 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NA29_RS02205 74f51183086d40f3e230585ec66e2bd0 167 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 30 164 3.9E-59 T 09-03-2017 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 NA29_RS02205 74f51183086d40f3e230585ec66e2bd0 167 SUPERFAMILY SSF52374 32 160 5.0E-22 T 09-03-2017 NA29_RS10610 44ca0a607af82802bc075a20d417a430 252 SUPERFAMILY SSF49354 34 152 1.26E-21 T 09-03-2017 IPR008962 PapD-like NA29_RS10610 44ca0a607af82802bc075a20d417a430 252 Gene3D G3DSA:2.60.40.360 43 153 6.5E-14 T 09-03-2017 IPR008962 PapD-like NA29_RS10610 44ca0a607af82802bc075a20d417a430 252 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 36 154 9.1E-19 T 09-03-2017 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 NA29_RS01165 dc8fb821b4428b29781fa911833cb815 489 Gene3D G3DSA:3.40.309.10 272 454 5.5E-65 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS01165 dc8fb821b4428b29781fa911833cb815 489 Gene3D G3DSA:3.40.605.10 9 271 8.9E-79 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS01165 dc8fb821b4428b29781fa911833cb815 489 Pfam PF00171 Aldehyde dehydrogenase family 23 477 2.1E-144 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS01165 dc8fb821b4428b29781fa911833cb815 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS01165 dc8fb821b4428b29781fa911833cb815 489 SUPERFAMILY SSF53720 9 485 3.93E-148 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS05245 e0cc499419611977da6a8e8111971407 314 Gene3D G3DSA:1.10.3720.10 105 310 1.3E-29 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS05245 e0cc499419611977da6a8e8111971407 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 313 1.2E-31 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS05245 e0cc499419611977da6a8e8111971407 314 SUPERFAMILY SSF161098 106 299 3.01E-27 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS05245 e0cc499419611977da6a8e8111971407 314 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 81 2.2E-12 T 09-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain NA29_RS14585 7852255b12e1d752f7eea53aac91039a 531 SMART SM00382 30 231 2.9E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS14585 7852255b12e1d752f7eea53aac91039a 531 SMART SM00382 310 503 1.3E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS14585 7852255b12e1d752f7eea53aac91039a 531 Pfam PF00005 ABC transporter 21 177 2.9E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS14585 7852255b12e1d752f7eea53aac91039a 531 Pfam PF00005 ABC transporter 302 454 1.8E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS14585 7852255b12e1d752f7eea53aac91039a 531 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS14585 7852255b12e1d752f7eea53aac91039a 531 SUPERFAMILY SSF52540 294 525 1.69E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14585 7852255b12e1d752f7eea53aac91039a 531 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS14585 7852255b12e1d752f7eea53aac91039a 531 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 260 8.8E-7 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS14585 7852255b12e1d752f7eea53aac91039a 531 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 505 529 0.19 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 NA29_RS14585 7852255b12e1d752f7eea53aac91039a 531 SUPERFAMILY SSF52540 5 253 3.71E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14585 7852255b12e1d752f7eea53aac91039a 531 Gene3D G3DSA:3.40.50.300 273 527 4.9E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14585 7852255b12e1d752f7eea53aac91039a 531 Gene3D G3DSA:3.40.50.300 4 256 9.1E-76 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS22705 2b025d3613832178f686914dd4c9fbda 406 Gene3D G3DSA:2.40.10.10 177 256 4.3E-7 T 09-03-2017 NA29_RS22705 2b025d3613832178f686914dd4c9fbda 406 Gene3D G3DSA:2.40.10.10 257 400 1.1E-14 T 09-03-2017 NA29_RS22705 2b025d3613832178f686914dd4c9fbda 406 SUPERFAMILY SSF50494 141 314 2.65E-25 T 09-03-2017 IPR009003 Peptidase S1, PA clan NA29_RS22705 2b025d3613832178f686914dd4c9fbda 406 SUPERFAMILY SSF50494 342 398 2.65E-25 T 09-03-2017 IPR009003 Peptidase S1, PA clan NA29_RS22705 2b025d3613832178f686914dd4c9fbda 406 Pfam PF13365 Trypsin-like peptidase domain 177 369 9.6E-19 T 09-03-2017 NA29_RS00260 a68bafeb0a717a85df8bd92afdbd77e8 801 Pfam PF00593 TonB dependent receptor 567 799 5.0E-32 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS00260 a68bafeb0a717a85df8bd92afdbd77e8 801 Gene3D G3DSA:2.40.170.20 276 801 1.6E-147 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS00260 a68bafeb0a717a85df8bd92afdbd77e8 801 Pfam PF07715 TonB-dependent Receptor Plug Domain 158 261 3.8E-23 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS00260 a68bafeb0a717a85df8bd92afdbd77e8 801 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 160 798 1.0E-124 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NA29_RS00260 a68bafeb0a717a85df8bd92afdbd77e8 801 Gene3D G3DSA:2.170.130.10 114 272 1.8E-38 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS00260 a68bafeb0a717a85df8bd92afdbd77e8 801 SMART SM00965 55 106 1.3E-8 T 09-03-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NA29_RS00260 a68bafeb0a717a85df8bd92afdbd77e8 801 SUPERFAMILY SSF56935 117 801 2.52E-136 T 09-03-2017 NA29_RS07225 c9b5535136d265df8f4708f7d3bf3641 441 SUPERFAMILY SSF118215 8 402 1.15E-112 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS07225 c9b5535136d265df8f4708f7d3bf3641 441 PRINTS PR00173 Glutamate-aspartate symporter signature 73 98 8.5E-26 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS07225 c9b5535136d265df8f4708f7d3bf3641 441 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 8.5E-26 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS07225 c9b5535136d265df8f4708f7d3bf3641 441 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 8.5E-26 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS07225 c9b5535136d265df8f4708f7d3bf3641 441 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 8.5E-26 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS07225 c9b5535136d265df8f4708f7d3bf3641 441 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 8.5E-26 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS07225 c9b5535136d265df8f4708f7d3bf3641 441 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 8.5E-26 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS07225 c9b5535136d265df8f4708f7d3bf3641 441 Gene3D G3DSA:1.10.3860.10 7 404 5.5E-111 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS07225 c9b5535136d265df8f4708f7d3bf3641 441 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 09-03-2017 IPR018107 Sodium:dicarboxylate symporter, conserved site NA29_RS07225 c9b5535136d265df8f4708f7d3bf3641 441 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 1.8E-109 T 09-03-2017 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 NA29_RS07225 c9b5535136d265df8f4708f7d3bf3641 441 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 35 50 - T 09-03-2017 IPR018107 Sodium:dicarboxylate symporter, conserved site NA29_RS13125 9b8424228377b56f430c8451da7087d6 230 Gene3D G3DSA:1.20.1250.20 18 135 2.2E-4 T 09-03-2017 NA29_RS08080 fab4b4131f6ae24ec04d72411abec880 455 SUPERFAMILY SSF103473 12 443 1.57E-79 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS08080 fab4b4131f6ae24ec04d72411abec880 455 Gene3D G3DSA:1.20.1250.20 258 444 2.5E-26 T 09-03-2017 NA29_RS08080 fab4b4131f6ae24ec04d72411abec880 455 Pfam PF07690 Major Facilitator Superfamily 29 391 2.4E-41 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS08080 fab4b4131f6ae24ec04d72411abec880 455 Gene3D G3DSA:1.20.1250.20 20 201 1.6E-35 T 09-03-2017 NA29_RS10855 e464e4db2bcea0e5353fadde694a3c8c 330 Gene3D G3DSA:3.30.450.40 19 165 4.1E-22 T 09-03-2017 IPR029016 GAF domain-like NA29_RS10855 e464e4db2bcea0e5353fadde694a3c8c 330 Pfam PF13185 GAF domain 22 155 4.6E-17 T 09-03-2017 IPR003018 GAF domain GO:0005515 NA29_RS10855 e464e4db2bcea0e5353fadde694a3c8c 330 SUPERFAMILY SSF55073 176 326 5.34E-44 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS10855 e464e4db2bcea0e5353fadde694a3c8c 330 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 169 324 9.0E-39 T 09-03-2017 IPR000160 GGDEF domain NA29_RS10855 e464e4db2bcea0e5353fadde694a3c8c 330 Pfam PF00990 Diguanylate cyclase, GGDEF domain 171 324 1.3E-44 T 09-03-2017 IPR000160 GGDEF domain NA29_RS10855 e464e4db2bcea0e5353fadde694a3c8c 330 SUPERFAMILY SSF55781 15 163 1.29E-21 T 09-03-2017 IPR029016 GAF domain-like NA29_RS10855 e464e4db2bcea0e5353fadde694a3c8c 330 Gene3D G3DSA:3.30.70.270 172 325 1.3E-49 T 09-03-2017 NA29_RS10855 e464e4db2bcea0e5353fadde694a3c8c 330 SMART SM00065 23 166 1.4E-9 T 09-03-2017 IPR003018 GAF domain GO:0005515 NA29_RS10855 e464e4db2bcea0e5353fadde694a3c8c 330 SMART SM00267 160 330 2.6E-55 T 09-03-2017 IPR000160 GGDEF domain NA29_RS12650 1a7e093f2be4e81927b6e2212daa4292 286 SUPERFAMILY SSF46785 37 108 4.99E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12650 1a7e093f2be4e81927b6e2212daa4292 286 SUPERFAMILY SSF55781 95 281 4.02E-46 T 09-03-2017 IPR029016 GAF domain-like NA29_RS12650 1a7e093f2be4e81927b6e2212daa4292 286 Gene3D G3DSA:1.10.10.10 32 106 1.3E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12650 1a7e093f2be4e81927b6e2212daa4292 286 SMART SM00346 37 127 1.8E-20 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS12650 1a7e093f2be4e81927b6e2212daa4292 286 Pfam PF09339 IclR helix-turn-helix domain 39 90 8.5E-11 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS12650 1a7e093f2be4e81927b6e2212daa4292 286 Pfam PF01614 Bacterial transcriptional regulator 157 280 8.4E-28 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS12650 1a7e093f2be4e81927b6e2212daa4292 286 Gene3D G3DSA:3.30.450.40 107 281 1.1E-48 T 09-03-2017 IPR029016 GAF domain-like NA29_RS09470 def3ec51d6223264593871b9d91848e3 364 SUPERFAMILY SSF50331 237 354 3.4E-15 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS09470 def3ec51d6223264593871b9d91848e3 364 Pfam PF00005 ABC transporter 20 161 2.8E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS09470 def3ec51d6223264593871b9d91848e3 364 SUPERFAMILY SSF52540 4 241 9.71E-87 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09470 def3ec51d6223264593871b9d91848e3 364 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS09470 def3ec51d6223264593871b9d91848e3 364 SMART SM00382 28 211 1.2E-19 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS09470 def3ec51d6223264593871b9d91848e3 364 Pfam PF08402 TOBE domain 284 354 9.3E-14 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 NA29_RS09470 def3ec51d6223264593871b9d91848e3 364 Gene3D G3DSA:3.40.50.300 4 239 5.2E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09100 147b01a2294f8696518d81b4e7d3601e 291 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 95 117 - T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NA29_RS09100 147b01a2294f8696518d81b4e7d3601e 291 Pfam PF01066 CDP-alcohol phosphatidyltransferase 54 117 1.3E-14 T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 NA29_RS12290 f97663b9e582c7306885626e3e279b7d 345 Pfam PF00561 alpha/beta hydrolase fold 73 202 7.7E-20 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS12290 f97663b9e582c7306885626e3e279b7d 345 Gene3D G3DSA:3.40.50.1820 53 342 4.9E-51 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS12290 f97663b9e582c7306885626e3e279b7d 345 PRINTS PR00412 Epoxide hydrolase signature 99 114 1.1E-14 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS12290 f97663b9e582c7306885626e3e279b7d 345 PRINTS PR00412 Epoxide hydrolase signature 320 342 1.1E-14 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS12290 f97663b9e582c7306885626e3e279b7d 345 PRINTS PR00412 Epoxide hydrolase signature 147 160 1.1E-14 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS12290 f97663b9e582c7306885626e3e279b7d 345 PRINTS PR00412 Epoxide hydrolase signature 161 174 1.1E-14 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS12290 f97663b9e582c7306885626e3e279b7d 345 PRINTS PR00412 Epoxide hydrolase signature 79 97 1.1E-14 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS12290 f97663b9e582c7306885626e3e279b7d 345 SUPERFAMILY SSF53474 53 342 4.25E-57 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS05425 3ee7d30c7c7205dd974a3a4723be7177 347 TIGRFAM TIGR02994 ectoine_eutE: ectoine utilization protein EutE 12 343 1.2E-147 T 09-03-2017 IPR014336 N-alpha-acetyl diaminobutyrate deacetylase DoeB NA29_RS05425 3ee7d30c7c7205dd974a3a4723be7177 347 Gene3D G3DSA:3.40.630.10 51 242 1.8E-28 T 09-03-2017 NA29_RS05425 3ee7d30c7c7205dd974a3a4723be7177 347 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 343 1.0E-66 T 09-03-2017 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 NA29_RS05425 3ee7d30c7c7205dd974a3a4723be7177 347 PIRSF PIRSF039012 7 347 3.3E-86 T 09-03-2017 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 NA29_RS05425 3ee7d30c7c7205dd974a3a4723be7177 347 SUPERFAMILY SSF53187 14 335 5.95E-54 T 09-03-2017 NA29_RS09205 69f8ea78469f2bb7828040e919d7158c 88 SUPERFAMILY SSF143800 1 81 1.29E-18 T 09-03-2017 NA29_RS09205 69f8ea78469f2bb7828040e919d7158c 88 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 81 1.2E-17 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS09205 69f8ea78469f2bb7828040e919d7158c 88 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.1E-14 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS09205 69f8ea78469f2bb7828040e919d7158c 88 PRINTS PR01249 Ribosomal protein L31 signature 61 79 1.1E-14 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS09205 69f8ea78469f2bb7828040e919d7158c 88 PRINTS PR01249 Ribosomal protein L31 signature 46 61 1.1E-14 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS09205 69f8ea78469f2bb7828040e919d7158c 88 Pfam PF01197 Ribosomal protein L31 1 80 4.4E-27 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS10955 df9fff72dd9d841784704aa91d12654a 281 Gene3D G3DSA:3.60.15.10 3 269 6.0E-51 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS10955 df9fff72dd9d841784704aa91d12654a 281 Pfam PF00753 Metallo-beta-lactamase superfamily 55 257 4.7E-25 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS10955 df9fff72dd9d841784704aa91d12654a 281 SUPERFAMILY SSF56281 3 269 1.57E-49 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS10955 df9fff72dd9d841784704aa91d12654a 281 SMART SM00849 55 257 6.4E-25 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS15410 0991eecb3d56f9556fc0ef2b49229f4a 143 Pfam PF08897 Domain of unknown function (DUF1841) 5 138 1.1E-63 T 09-03-2017 IPR014993 Protein of unknown function DUF1841 NA29_RS07555 fb2cbc04a58ee91b1dd7553b0416bf6c 484 SUPERFAMILY SSF53720 7 482 6.02E-171 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS07555 fb2cbc04a58ee91b1dd7553b0416bf6c 484 Pfam PF00171 Aldehyde dehydrogenase family 20 478 5.6E-170 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS07555 fb2cbc04a58ee91b1dd7553b0416bf6c 484 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 476 7.5E-212 T 09-03-2017 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 NA29_RS07555 fb2cbc04a58ee91b1dd7553b0416bf6c 484 Gene3D G3DSA:3.40.309.10 269 454 5.2E-69 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS07555 fb2cbc04a58ee91b1dd7553b0416bf6c 484 Gene3D G3DSA:3.40.605.10 11 268 3.5E-101 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS07555 fb2cbc04a58ee91b1dd7553b0416bf6c 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS07555 fb2cbc04a58ee91b1dd7553b0416bf6c 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS17290 dd0e2e5814b537abadba35d5175f9660 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 267 8.0E-12 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS17290 dd0e2e5814b537abadba35d5175f9660 273 Gene3D G3DSA:1.10.3720.10 75 260 2.5E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS17290 dd0e2e5814b537abadba35d5175f9660 273 SUPERFAMILY SSF161098 66 254 1.26E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS03190 52d395079a4ce39b75f126e6f8e2d4e9 398 Gene3D G3DSA:3.40.640.10 56 277 3.6E-77 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS03190 52d395079a4ce39b75f126e6f8e2d4e9 398 Gene3D G3DSA:3.90.1150.10 278 394 3.6E-9 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS03190 52d395079a4ce39b75f126e6f8e2d4e9 398 SUPERFAMILY SSF53383 8 394 7.51E-95 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS03190 52d395079a4ce39b75f126e6f8e2d4e9 398 Pfam PF00155 Aminotransferase class I and II 49 388 2.7E-37 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS02905 674148ff1ed631b7554e7c8b32ee75bd 30 SUPERFAMILY SSF51126 2 30 5.02E-5 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS02905 674148ff1ed631b7554e7c8b32ee75bd 30 Pfam PF12951 Passenger-associated-transport-repeat 1 30 1.3E-11 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02905 674148ff1ed631b7554e7c8b32ee75bd 30 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1 29 8.6E-13 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02905 674148ff1ed631b7554e7c8b32ee75bd 30 Gene3D G3DSA:2.160.20.20 2 30 2.2E-4 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS07295 b0491601d54e793d80ccf53eb464ff24 344 Pfam PF12849 PBP superfamily domain 18 304 2.5E-64 T 09-03-2017 IPR024370 PBP domain NA29_RS07295 b0491601d54e793d80ccf53eb464ff24 344 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 25 333 7.2E-131 T 09-03-2017 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 NA29_RS07295 b0491601d54e793d80ccf53eb464ff24 344 PIRSF PIRSF002756 4 336 5.1E-106 T 09-03-2017 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 NA29_RS07295 b0491601d54e793d80ccf53eb464ff24 344 SUPERFAMILY SSF53850 24 333 7.24E-97 T 09-03-2017 NA29_RS07295 b0491601d54e793d80ccf53eb464ff24 344 Gene3D G3DSA:3.40.190.10 177 335 1.2E-29 T 09-03-2017 NA29_RS07295 b0491601d54e793d80ccf53eb464ff24 344 Gene3D G3DSA:3.40.190.10 23 173 1.3E-56 T 09-03-2017 NA29_RS23470 71ee01295a7a60da52c7335be608fa7e 213 Gene3D G3DSA:3.40.50.880 2 211 2.0E-77 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS23470 71ee01295a7a60da52c7335be608fa7e 213 Pfam PF00117 Glutamine amidotransferase class-I 6 200 1.0E-14 T 09-03-2017 IPR017926 Glutamine amidotransferase NA29_RS23470 71ee01295a7a60da52c7335be608fa7e 213 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 211 3.8E-59 T 09-03-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 NA29_RS23470 71ee01295a7a60da52c7335be608fa7e 213 PIRSF PIRSF000495 2 213 4.0E-65 T 09-03-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 NA29_RS23470 71ee01295a7a60da52c7335be608fa7e 213 SUPERFAMILY SSF52317 2 211 2.87E-53 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS23470 71ee01295a7a60da52c7335be608fa7e 213 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 211 34.523 T 09-03-2017 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 NA29_RS12620 2e037701fc76e6f98e251c37b41bb71e 290 SUPERFAMILY SSF55729 43 214 7.86E-11 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS12620 2e037701fc76e6f98e251c37b41bb71e 290 Gene3D G3DSA:3.40.630.30 86 186 4.4E-6 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS21810 54bad5f98fa7728bdfa83cc51e378e15 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 59 82 1.2E-9 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS21810 54bad5f98fa7728bdfa83cc51e378e15 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 51 1.2E-9 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS21810 54bad5f98fa7728bdfa83cc51e378e15 223 SUPERFAMILY SSF46689 32 99 8.21E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS21810 54bad5f98fa7728bdfa83cc51e378e15 223 SUPERFAMILY SSF48498 107 210 3.95E-12 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS21810 54bad5f98fa7728bdfa83cc51e378e15 223 Gene3D G3DSA:1.10.357.10 35 195 1.5E-29 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS21810 54bad5f98fa7728bdfa83cc51e378e15 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 38 83 7.9E-16 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS03140 4eddf84b6a0b291f2e619977a0afc770 339 Gene3D G3DSA:1.10.260.40 13 66 3.4E-20 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS03140 4eddf84b6a0b291f2e619977a0afc770 339 SUPERFAMILY SSF47413 12 70 2.08E-13 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS03140 4eddf84b6a0b291f2e619977a0afc770 339 Gene3D G3DSA:3.40.50.2300 67 181 8.1E-23 T 09-03-2017 NA29_RS03140 4eddf84b6a0b291f2e619977a0afc770 339 SUPERFAMILY SSF53822 74 336 2.78E-48 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS03140 4eddf84b6a0b291f2e619977a0afc770 339 Gene3D G3DSA:3.40.50.2300 182 335 6.2E-39 T 09-03-2017 NA29_RS03140 4eddf84b6a0b291f2e619977a0afc770 339 Pfam PF13377 Periplasmic binding protein-like domain 176 334 4.7E-31 T 09-03-2017 NA29_RS03140 4eddf84b6a0b291f2e619977a0afc770 339 SMART SM00354 12 84 7.7E-19 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 NA29_RS03140 4eddf84b6a0b291f2e619977a0afc770 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 16 61 2.6E-13 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 NA29_RS03995 ff0ad3abb7d1a6e8d645b2ca8ab0ad0a 353 Pfam PF13609 Gram-negative porin 22 325 3.6E-40 T 09-03-2017 NA29_RS03995 ff0ad3abb7d1a6e8d645b2ca8ab0ad0a 353 Gene3D G3DSA:2.40.160.10 32 353 1.3E-66 T 09-03-2017 IPR023614 Porin domain NA29_RS03995 ff0ad3abb7d1a6e8d645b2ca8ab0ad0a 353 SUPERFAMILY SSF56935 32 353 3.87E-62 T 09-03-2017 NA29_RS21140 e241a314c02ed99b05029d639d75b536 212 Pfam PF01810 LysE type translocator 15 207 2.4E-38 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS21140 e241a314c02ed99b05029d639d75b536 212 PIRSF PIRSF006324 1 212 3.3E-69 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS08795 6f19a16243c2bff05f1bc3d63a292b11 407 Gene3D G3DSA:3.50.50.60 1 105 3.9E-25 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08795 6f19a16243c2bff05f1bc3d63a292b11 407 Gene3D G3DSA:3.50.50.60 106 309 1.6E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08795 6f19a16243c2bff05f1bc3d63a292b11 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 4.3E-16 T 09-03-2017 NA29_RS08795 6f19a16243c2bff05f1bc3d63a292b11 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 277 4.3E-16 T 09-03-2017 NA29_RS08795 6f19a16243c2bff05f1bc3d63a292b11 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 4.3E-16 T 09-03-2017 NA29_RS08795 6f19a16243c2bff05f1bc3d63a292b11 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 4.3E-16 T 09-03-2017 NA29_RS08795 6f19a16243c2bff05f1bc3d63a292b11 407 SUPERFAMILY SSF55424 314 402 2.2E-19 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 NA29_RS08795 6f19a16243c2bff05f1bc3d63a292b11 407 Gene3D G3DSA:3.30.390.30 319 402 2.6E-21 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NA29_RS08795 6f19a16243c2bff05f1bc3d63a292b11 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 5.3E-24 T 09-03-2017 NA29_RS08795 6f19a16243c2bff05f1bc3d63a292b11 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 5.3E-24 T 09-03-2017 NA29_RS08795 6f19a16243c2bff05f1bc3d63a292b11 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 277 5.3E-24 T 09-03-2017 NA29_RS08795 6f19a16243c2bff05f1bc3d63a292b11 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 5.3E-24 T 09-03-2017 NA29_RS08795 6f19a16243c2bff05f1bc3d63a292b11 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 5.3E-24 T 09-03-2017 NA29_RS08795 6f19a16243c2bff05f1bc3d63a292b11 407 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 300 8.2E-58 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08795 6f19a16243c2bff05f1bc3d63a292b11 407 SUPERFAMILY SSF51905 3 309 2.18E-40 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08795 6f19a16243c2bff05f1bc3d63a292b11 407 Pfam PF14759 Reductase C-terminal 319 402 2.6E-19 T 09-03-2017 IPR028202 Reductase, C-terminal NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 415 442 1.8E-32 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 1.8E-32 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 1.8E-32 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 338 367 1.8E-32 T 09-03-2017 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 SUPERFAMILY SSF55785 148 254 4.71E-25 T 09-03-2017 IPR000014 PAS domain NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 Gene3D G3DSA:3.30.450.20 147 251 3.7E-23 T 09-03-2017 NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 Gene3D G3DSA:3.30.450.20 26 129 1.3E-23 T 09-03-2017 NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 SMART SM00283 317 564 5.9E-78 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 136 4.3E-14 T 09-03-2017 IPR000014 PAS domain NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 147 257 6.1E-14 T 09-03-2017 IPR000014 PAS domain NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 Gene3D G3DSA:1.10.287.950 332 534 2.0E-52 T 09-03-2017 NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 SMART SM00091 15 83 1.2 T 09-03-2017 IPR000014 PAS domain NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 SMART SM00091 135 205 2.0 T 09-03-2017 IPR000014 PAS domain NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 SMART SM00086 88 130 0.024 T 09-03-2017 IPR001610 PAC motif NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 SMART SM00086 210 252 8.4E-5 T 09-03-2017 IPR001610 PAC motif NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 Pfam PF08447 PAS fold 38 123 1.3E-15 T 09-03-2017 IPR013655 PAS fold-3 GO:0005515 NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 Pfam PF08447 PAS fold 160 245 4.6E-15 T 09-03-2017 IPR013655 PAS fold-3 GO:0005515 NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 SUPERFAMILY SSF55785 26 127 9.25E-25 T 09-03-2017 IPR000014 PAS domain NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 377 563 7.0E-51 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS22840 a736af1b835e956601b1aff7b27b8299 565 SUPERFAMILY SSF58104 284 565 6.93E-68 T 09-03-2017 NA29_RS11885 6e5df09f3454fbe3504f039c1e811c3f 300 SUPERFAMILY SSF46785 5 85 1.3E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11885 6e5df09f3454fbe3504f039c1e811c3f 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.7E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11885 6e5df09f3454fbe3504f039c1e811c3f 300 Pfam PF03466 LysR substrate binding domain 87 292 1.5E-37 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS11885 6e5df09f3454fbe3504f039c1e811c3f 300 Gene3D G3DSA:3.40.190.10 90 172 5.0E-21 T 09-03-2017 NA29_RS11885 6e5df09f3454fbe3504f039c1e811c3f 300 Gene3D G3DSA:3.40.190.10 173 258 3.8E-16 T 09-03-2017 NA29_RS11885 6e5df09f3454fbe3504f039c1e811c3f 300 SUPERFAMILY SSF53850 87 295 9.23E-40 T 09-03-2017 NA29_RS11885 6e5df09f3454fbe3504f039c1e811c3f 300 Gene3D G3DSA:1.10.10.10 4 84 3.3E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05025 6988c6014a782693bf5d5dd651d65251 136 Pfam PF00576 HIUase/Transthyretin family 27 135 1.2E-35 T 09-03-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 NA29_RS05025 6988c6014a782693bf5d5dd651d65251 136 SUPERFAMILY SSF49472 22 136 1.31E-38 T 09-03-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 NA29_RS05025 6988c6014a782693bf5d5dd651d65251 136 PRINTS PR00189 Transthyretin signature 58 83 1.2E-9 T 09-03-2017 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 NA29_RS05025 6988c6014a782693bf5d5dd651d65251 136 PRINTS PR00189 Transthyretin signature 26 46 1.2E-9 T 09-03-2017 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 NA29_RS05025 6988c6014a782693bf5d5dd651d65251 136 PRINTS PR00189 Transthyretin signature 114 136 1.2E-9 T 09-03-2017 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 NA29_RS05025 6988c6014a782693bf5d5dd651d65251 136 Gene3D G3DSA:2.60.40.180 23 135 9.0E-39 T 09-03-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 NA29_RS05025 6988c6014a782693bf5d5dd651d65251 136 SMART SM00095 22 136 3.8E-4 T 09-03-2017 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 NA29_RS05025 6988c6014a782693bf5d5dd651d65251 136 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 25 135 3.3E-41 T 09-03-2017 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 NA29_RS06490 1fc57d7ac2ac52e3fcf82a463b302e26 193 Pfam PF01965 DJ-1/PfpI family 4 185 4.6E-52 T 09-03-2017 IPR002818 DJ-1/PfpI NA29_RS06490 1fc57d7ac2ac52e3fcf82a463b302e26 193 Gene3D G3DSA:3.40.50.880 4 187 2.0E-57 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS06490 1fc57d7ac2ac52e3fcf82a463b302e26 193 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 6 187 4.4E-58 T 09-03-2017 IPR006286 Peptidase C56, PfpI NA29_RS06490 1fc57d7ac2ac52e3fcf82a463b302e26 193 SUPERFAMILY SSF52317 4 188 2.08E-52 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS16305 4e52fb03f7172e30b8461f037d25517d 215 Pfam PF01292 Prokaryotic cytochrome b561 18 194 3.3E-27 T 09-03-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 NA29_RS16305 4e52fb03f7172e30b8461f037d25517d 215 SUPERFAMILY SSF81342 14 213 6.67E-52 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 NA29_RS16305 4e52fb03f7172e30b8461f037d25517d 215 Gene3D G3DSA:1.20.950.20 13 214 2.7E-63 T 09-03-2017 NA29_RS16305 4e52fb03f7172e30b8461f037d25517d 215 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 16 214 2.0E-58 T 09-03-2017 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 NA29_RS20430 549ce10fd049fd54eb72aead528fb012 514 SUPERFAMILY SSF55103 220 488 3.6E-70 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NA29_RS20430 549ce10fd049fd54eb72aead528fb012 514 Gene3D G3DSA:1.10.45.10 447 487 4.6E-6 T 09-03-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 NA29_RS20430 549ce10fd049fd54eb72aead528fb012 514 Pfam PF02913 FAD linked oxidases, C-terminal domain 247 485 1.9E-60 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 NA29_RS20430 549ce10fd049fd54eb72aead528fb012 514 SUPERFAMILY SSF56176 34 245 6.54E-69 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS20430 549ce10fd049fd54eb72aead528fb012 514 Gene3D G3DSA:3.30.465.10 126 245 4.3E-33 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS20430 549ce10fd049fd54eb72aead528fb012 514 Gene3D G3DSA:3.30.43.10 29 124 3.0E-27 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NA29_RS20430 549ce10fd049fd54eb72aead528fb012 514 Pfam PF01565 FAD binding domain 71 209 2.6E-41 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NA29_RS22450 9a25cdb4cd37b2731d7907a0ebb82c6a 360 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 12 148 2.0E-35 T 09-03-2017 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 NA29_RS22450 9a25cdb4cd37b2731d7907a0ebb82c6a 360 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 188 349 7.7E-41 T 09-03-2017 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 NA29_RS22450 9a25cdb4cd37b2731d7907a0ebb82c6a 360 Gene3D G3DSA:3.40.50.2000 6 199 9.0E-67 T 09-03-2017 NA29_RS22450 9a25cdb4cd37b2731d7907a0ebb82c6a 360 Gene3D G3DSA:3.40.50.2000 258 343 6.5E-7 T 09-03-2017 NA29_RS22450 9a25cdb4cd37b2731d7907a0ebb82c6a 360 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 11 358 35.813 T 09-03-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 NA29_RS22450 9a25cdb4cd37b2731d7907a0ebb82c6a 360 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 6 353 1.5E-104 T 09-03-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 NA29_RS22450 9a25cdb4cd37b2731d7907a0ebb82c6a 360 SUPERFAMILY SSF53756 10 358 2.3E-122 T 09-03-2017 NA29_RS00985 177e750f38cc9599c498743d380e62fd 268 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 3 262 3.6E-110 T 09-03-2017 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 NA29_RS00985 177e750f38cc9599c498743d380e62fd 268 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 29 250 1.2E-71 T 09-03-2017 IPR022488 Polyphosphate kinase-2-related NA29_RS00985 177e750f38cc9599c498743d380e62fd 268 PIRSF PIRSF028756 3 266 2.0E-76 T 09-03-2017 IPR016898 Polyphosphate kinase 2 NA29_RS00985 177e750f38cc9599c498743d380e62fd 268 Gene3D G3DSA:3.40.50.300 3 261 1.5E-95 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00985 177e750f38cc9599c498743d380e62fd 268 SUPERFAMILY SSF52540 60 242 1.03E-13 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS05525 0a3ef69f3eaf3b6853f2f9609f105955 499 Pfam PF01435 Peptidase family M48 79 255 2.1E-29 T 09-03-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 NA29_RS05525 0a3ef69f3eaf3b6853f2f9609f105955 499 SUPERFAMILY SSF48452 305 431 4.17E-10 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS05525 0a3ef69f3eaf3b6853f2f9609f105955 499 Pfam PF14559 Tetratricopeptide repeat 361 423 5.4E-7 T 09-03-2017 NA29_RS05525 0a3ef69f3eaf3b6853f2f9609f105955 499 Gene3D G3DSA:1.25.40.10 289 460 3.2E-9 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS05525 0a3ef69f3eaf3b6853f2f9609f105955 499 Gene3D G3DSA:3.30.2010.10 78 146 5.8E-15 T 09-03-2017 NA29_RS24295 804d4a771a3aa98f4ce94172d2a68d91 484 Pfam PF00939 Sodium:sulfate symporter transmembrane region 52 483 5.3E-23 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 NA29_RS14830 529ebb11ad3df1c620de08d634219f22 90 Pfam PF03937 Flavinator of succinate dehydrogenase 13 77 1.5E-22 T 09-03-2017 IPR005631 Flavinator of succinate dehydrogenase NA29_RS14830 529ebb11ad3df1c620de08d634219f22 90 SUPERFAMILY SSF109910 6 84 4.84E-21 T 09-03-2017 IPR005631 Flavinator of succinate dehydrogenase NA29_RS14830 529ebb11ad3df1c620de08d634219f22 90 Gene3D G3DSA:1.10.150.250 7 87 4.1E-25 T 09-03-2017 IPR005631 Flavinator of succinate dehydrogenase NA29_RS12190 9b3a81b6a1a943acab7731a17ddeb5f9 421 Pfam PF07687 Peptidase dimerisation domain 221 322 1.6E-4 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS12190 9b3a81b6a1a943acab7731a17ddeb5f9 421 PIRSF PIRSF001235 18 421 6.9E-125 T 09-03-2017 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 NA29_RS12190 9b3a81b6a1a943acab7731a17ddeb5f9 421 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 23 417 3.0E-121 T 09-03-2017 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 NA29_RS12190 9b3a81b6a1a943acab7731a17ddeb5f9 421 Pfam PF01546 Peptidase family M20/M25/M40 91 417 1.7E-32 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NA29_RS12190 9b3a81b6a1a943acab7731a17ddeb5f9 421 Gene3D G3DSA:3.40.630.10 17 236 1.8E-108 T 09-03-2017 NA29_RS12190 9b3a81b6a1a943acab7731a17ddeb5f9 421 Gene3D G3DSA:3.40.630.10 362 420 1.8E-108 T 09-03-2017 NA29_RS12190 9b3a81b6a1a943acab7731a17ddeb5f9 421 SUPERFAMILY SSF53187 347 420 1.0E-87 T 09-03-2017 NA29_RS12190 9b3a81b6a1a943acab7731a17ddeb5f9 421 SUPERFAMILY SSF53187 17 234 1.0E-87 T 09-03-2017 NA29_RS12190 9b3a81b6a1a943acab7731a17ddeb5f9 421 Gene3D G3DSA:3.30.70.360 237 340 2.3E-32 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS12190 9b3a81b6a1a943acab7731a17ddeb5f9 421 SUPERFAMILY SSF55031 224 339 2.97E-25 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS20260 eb5a764cff03bdd7ea4cc2b84fa6172f 398 Gene3D G3DSA:3.90.230.10 162 393 8.2E-43 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS20260 eb5a764cff03bdd7ea4cc2b84fa6172f 398 Gene3D G3DSA:3.40.350.10 2 157 4.4E-15 T 09-03-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal NA29_RS20260 eb5a764cff03bdd7ea4cc2b84fa6172f 398 Pfam PF01321 Creatinase/Prolidase N-terminal domain 17 161 1.0E-7 T 09-03-2017 IPR000587 Creatinase, N-terminal GO:0016787 NA29_RS20260 eb5a764cff03bdd7ea4cc2b84fa6172f 398 Pfam PF00557 Metallopeptidase family M24 170 377 4.1E-29 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS20260 eb5a764cff03bdd7ea4cc2b84fa6172f 398 SUPERFAMILY SSF53092 3 160 3.4E-11 T 09-03-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal NA29_RS20260 eb5a764cff03bdd7ea4cc2b84fa6172f 398 SUPERFAMILY SSF55920 162 393 3.53E-48 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS19705 88f9814de207503246446eb8286c594b 133 Gene3D G3DSA:3.30.429.20 1 61 7.5E-10 T 09-03-2017 NA29_RS19705 88f9814de207503246446eb8286c594b 133 SUPERFAMILY SSF55331 2 125 7.53E-21 T 09-03-2017 IPR014347 Tautomerase/MIF superfamily NA29_RS19705 88f9814de207503246446eb8286c594b 133 Pfam PF01361 Tautomerase enzyme 2 59 1.7E-4 T 09-03-2017 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 NA29_RS13445 207ca644ef856aadc8a6a6113aa0becf 196 Pfam PF10067 Predicted membrane protein (DUF2306) 6 109 9.7E-11 T 09-03-2017 IPR018750 Protein of unknown function DUF2306, membrane NA29_RS01370 b7aefeebec090f4b29d964593bb82f20 241 Pfam PF01730 UreF 52 198 8.9E-39 T 09-03-2017 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 NA29_RS01370 b7aefeebec090f4b29d964593bb82f20 241 Hamap MF_01385 Urease accessory protein UreF [ureF]. 20 241 32.384 T 09-03-2017 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 NA29_RS01370 b7aefeebec090f4b29d964593bb82f20 241 PIRSF PIRSF009467 17 241 2.3E-65 T 09-03-2017 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 NA29_RS24660 5e925c148c1dab41993b95e93047a857 127 Gene3D G3DSA:2.40.50.100 7 125 9.1E-45 T 09-03-2017 NA29_RS24660 5e925c148c1dab41993b95e93047a857 127 SUPERFAMILY SSF51230 3 125 1.11E-39 T 09-03-2017 IPR011053 Single hybrid motif NA29_RS24660 5e925c148c1dab41993b95e93047a857 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 29.539 T 09-03-2017 IPR002930 Glycine cleavage system H-protein NA29_RS24660 5e925c148c1dab41993b95e93047a857 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 124 3.8E-43 T 09-03-2017 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 NA29_RS24660 5e925c148c1dab41993b95e93047a857 127 Pfam PF01597 Glycine cleavage H-protein 8 125 1.9E-42 T 09-03-2017 IPR002930 Glycine cleavage system H-protein NA29_RS16035 a19347630c02cbc658c19f8b62ff4fd8 232 Pfam PF10099 Anti-sigma-K factor rskA 62 225 2.7E-21 T 09-03-2017 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 NA29_RS02740 de82a996ea4795f9a23ccd05d1f31ccf 118 SUPERFAMILY SSF69754 2 109 2.49E-29 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NA29_RS02740 de82a996ea4795f9a23ccd05d1f31ccf 118 Gene3D G3DSA:3.30.160.100 1 100 8.8E-30 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NA29_RS02740 de82a996ea4795f9a23ccd05d1f31ccf 118 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 97 1.6E-21 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NA29_RS02740 de82a996ea4795f9a23ccd05d1f31ccf 118 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 103 1.7E-24 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 NA29_RS06990 d9a860c31e0d5483b18b84f29c14c1b8 430 PIRSF PIRSF005353 1 429 3.5E-176 T 09-03-2017 IPR026033 Purine permease PbuG-like NA29_RS06990 d9a860c31e0d5483b18b84f29c14c1b8 430 Pfam PF00860 Permease family 17 390 3.6E-54 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 NA29_RS12340 ccca89a1b8126a16fe5aa354f6c83485 321 Pfam PF10282 Lactonase, 7-bladed beta-propeller 92 292 7.9E-9 T 09-03-2017 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31 NA29_RS12340 ccca89a1b8126a16fe5aa354f6c83485 321 Gene3D G3DSA:2.130.10.10 19 238 1.2E-37 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NA29_RS12340 ccca89a1b8126a16fe5aa354f6c83485 321 SUPERFAMILY SSF50974 3 309 4.18E-67 T 09-03-2017 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 NA29_RS12340 ccca89a1b8126a16fe5aa354f6c83485 321 Gene3D G3DSA:2.130.10.10 239 312 4.5E-11 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NA29_RS07800 50d29e7856ea19eaf17a0cbc3c79b283 176 SUPERFAMILY SSF52016 9 163 9.42E-40 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS07800 50d29e7856ea19eaf17a0cbc3c79b283 176 Gene3D G3DSA:3.20.19.10 11 162 5.4E-26 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS07800 50d29e7856ea19eaf17a0cbc3c79b283 176 Pfam PF00694 Aconitase C-terminal domain 55 109 1.6E-16 T 09-03-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS07800 50d29e7856ea19eaf17a0cbc3c79b283 176 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 9 161 3.7E-47 T 09-03-2017 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 KEGG: 00290+4.2.1.33 NA29_RS11025 dcf857d17b4e071154f46f8bcaefa3a7 299 Gene3D G3DSA:3.40.190.10 90 172 1.7E-34 T 09-03-2017 NA29_RS11025 dcf857d17b4e071154f46f8bcaefa3a7 299 Gene3D G3DSA:3.40.190.10 273 299 1.7E-34 T 09-03-2017 NA29_RS11025 dcf857d17b4e071154f46f8bcaefa3a7 299 SUPERFAMILY SSF46785 5 86 3.2E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11025 dcf857d17b4e071154f46f8bcaefa3a7 299 Gene3D G3DSA:3.40.190.10 173 269 5.2E-25 T 09-03-2017 NA29_RS11025 dcf857d17b4e071154f46f8bcaefa3a7 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 3.1E-14 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11025 dcf857d17b4e071154f46f8bcaefa3a7 299 Gene3D G3DSA:1.10.10.10 2 86 4.8E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11025 dcf857d17b4e071154f46f8bcaefa3a7 299 SUPERFAMILY SSF53850 90 297 3.57E-43 T 09-03-2017 NA29_RS11025 dcf857d17b4e071154f46f8bcaefa3a7 299 Pfam PF03466 LysR substrate binding domain 95 297 2.3E-25 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS22310 25f4ae1eb516d686092f0413f0921695 197 Pfam PF01914 MarC family integral membrane protein 5 191 9.9E-49 T 09-03-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 NA29_RS22310 25f4ae1eb516d686092f0413f0921695 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 190 2.6E-32 T 09-03-2017 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 NA29_RS05345 b2ff0a4c262e0ce621e85654800bd3ff 252 SUPERFAMILY SSF55068 59 229 2.62E-66 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 NA29_RS05345 b2ff0a4c262e0ce621e85654800bd3ff 252 Pfam PF01625 Peptide methionine sulfoxide reductase 67 219 3.2E-56 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 NA29_RS05345 b2ff0a4c262e0ce621e85654800bd3ff 252 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 65 225 34.71 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 NA29_RS05345 b2ff0a4c262e0ce621e85654800bd3ff 252 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 66 216 2.1E-52 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 NA29_RS05345 b2ff0a4c262e0ce621e85654800bd3ff 252 Gene3D G3DSA:3.30.1060.10 58 218 6.5E-65 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 NA29_RS11395 ba37bf3aedc4d37bae9233a744224681 138 PIRSF PIRSF029394 7 137 2.9E-44 T 09-03-2017 IPR016918 Uncharacterised conserved protein UCP029394 NA29_RS11395 ba37bf3aedc4d37bae9233a744224681 138 SUPERFAMILY SSF54427 11 135 1.26E-40 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS11395 ba37bf3aedc4d37bae9233a744224681 138 Pfam PF13474 SnoaL-like domain 34 131 5.7E-5 T 09-03-2017 IPR009959 Polyketide cyclase SnoaL-like domain NA29_RS11395 ba37bf3aedc4d37bae9233a744224681 138 Gene3D G3DSA:3.10.450.50 11 135 7.3E-47 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS24515 830e09642d53dfc31103635d0efad74a 113 Gene3D G3DSA:1.10.760.10 31 106 9.8E-13 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24515 830e09642d53dfc31103635d0efad74a 113 SUPERFAMILY SSF46626 34 105 7.78E-10 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS03285 781bb599d43e5eff48d9a5f6302a42aa 338 Pfam PF02735 Ku70/Ku80 beta-barrel domain 12 195 2.3E-35 T 09-03-2017 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571 NA29_RS03285 781bb599d43e5eff48d9a5f6302a42aa 338 TIGRFAM TIGR02772 Ku_bact: Ku protein 2 266 5.2E-92 T 09-03-2017 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NA29_RS03285 781bb599d43e5eff48d9a5f6302a42aa 338 PIRSF PIRSF006493 1 338 3.8E-86 T 09-03-2017 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NA29_RS03285 781bb599d43e5eff48d9a5f6302a42aa 338 Gene3D G3DSA:2.40.290.10 6 155 1.1E-11 T 09-03-2017 IPR016194 SPOC-like, C-terminal domain NA29_RS03285 781bb599d43e5eff48d9a5f6302a42aa 338 SUPERFAMILY SSF100939 2 268 1.8E-48 T 09-03-2017 IPR016194 SPOC-like, C-terminal domain NA29_RS03285 781bb599d43e5eff48d9a5f6302a42aa 338 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 2 265 30.962 T 09-03-2017 IPR009187 Non-homologous end joining protein Ku, prokaryotic type NA29_RS03285 781bb599d43e5eff48d9a5f6302a42aa 338 SMART SM00559 53 181 1.7E-30 T 09-03-2017 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571 NA29_RS12455 68ada674984e60fdd60ce76c5875684e 138 SUPERFAMILY SSF75620 5 98 2.75E-12 T 09-03-2017 NA29_RS12455 68ada674984e60fdd60ce76c5875684e 138 Pfam PF00472 RF-1 domain 3 129 6.8E-26 T 09-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 NA29_RS12455 68ada674984e60fdd60ce76c5875684e 138 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 18 34 - T 09-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 NA29_RS12455 68ada674984e60fdd60ce76c5875684e 138 Gene3D G3DSA:3.30.160.200 3 102 6.6E-34 T 09-03-2017 NA29_RS25135 3474a5b66f2e1a6877e4ea601e68fde4 663 Pfam PF01134 Glucose inhibited division protein A 8 400 3.2E-165 T 09-03-2017 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 NA29_RS25135 3474a5b66f2e1a6877e4ea601e68fde4 663 Pfam PF13932 GidA associated domain 403 626 6.1E-72 T 09-03-2017 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 NA29_RS25135 3474a5b66f2e1a6877e4ea601e68fde4 663 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 631 1.2E-270 T 09-03-2017 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 NA29_RS25135 3474a5b66f2e1a6877e4ea601e68fde4 663 Gene3D G3DSA:3.50.50.60 6 233 2.2E-53 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS25135 3474a5b66f2e1a6877e4ea601e68fde4 663 SMART SM01228 556 627 7.1E-42 T 09-03-2017 NA29_RS25135 3474a5b66f2e1a6877e4ea601e68fde4 663 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 634 42.514 T 09-03-2017 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 NA29_RS25135 3474a5b66f2e1a6877e4ea601e68fde4 663 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 09-03-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 NA29_RS25135 3474a5b66f2e1a6877e4ea601e68fde4 663 SUPERFAMILY SSF51905 6 66 7.85E-50 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS25135 3474a5b66f2e1a6877e4ea601e68fde4 663 SUPERFAMILY SSF51905 97 262 7.85E-50 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS25135 3474a5b66f2e1a6877e4ea601e68fde4 663 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 09-03-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 NA29_RS13975 48a4e8e7a37f1b0a839cf24c94ac33cc 925 Pfam PF00805 Pentapeptide repeats (8 copies) 246 281 0.0018 T 09-03-2017 IPR001646 Pentapeptide repeat NA29_RS13975 48a4e8e7a37f1b0a839cf24c94ac33cc 925 Pfam PF00805 Pentapeptide repeats (8 copies) 209 241 1.8E-6 T 09-03-2017 IPR001646 Pentapeptide repeat NA29_RS13975 48a4e8e7a37f1b0a839cf24c94ac33cc 925 Pfam PF00805 Pentapeptide repeats (8 copies) 312 342 0.0016 T 09-03-2017 IPR001646 Pentapeptide repeat NA29_RS13975 48a4e8e7a37f1b0a839cf24c94ac33cc 925 SUPERFAMILY SSF141571 154 291 8.63E-24 T 09-03-2017 NA29_RS13975 48a4e8e7a37f1b0a839cf24c94ac33cc 925 SUPERFAMILY SSF141571 248 378 3.4E-19 T 09-03-2017 NA29_RS03605 c76269dd716b1d5cf0aa362008bdcadd 374 Gene3D G3DSA:2.40.160.10 21 374 2.3E-89 T 09-03-2017 IPR023614 Porin domain NA29_RS03605 c76269dd716b1d5cf0aa362008bdcadd 374 SUPERFAMILY SSF56935 240 374 7.63E-79 T 09-03-2017 NA29_RS03605 c76269dd716b1d5cf0aa362008bdcadd 374 SUPERFAMILY SSF56935 21 212 7.63E-79 T 09-03-2017 NA29_RS03605 c76269dd716b1d5cf0aa362008bdcadd 374 PRINTS PR00184 Neisseria sp. porin signature 53 78 1.6E-7 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS03605 c76269dd716b1d5cf0aa362008bdcadd 374 PRINTS PR00184 Neisseria sp. porin signature 316 340 1.6E-7 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS03605 c76269dd716b1d5cf0aa362008bdcadd 374 PRINTS PR00184 Neisseria sp. porin signature 184 201 1.6E-7 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS03605 c76269dd716b1d5cf0aa362008bdcadd 374 PRINTS PR00184 Neisseria sp. porin signature 154 171 1.6E-7 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS03605 c76269dd716b1d5cf0aa362008bdcadd 374 Pfam PF13609 Gram-negative porin 9 343 1.6E-40 T 09-03-2017 NA29_RS03605 c76269dd716b1d5cf0aa362008bdcadd 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 155 166 4.5E-5 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS03605 c76269dd716b1d5cf0aa362008bdcadd 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 183 195 4.5E-5 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS03605 c76269dd716b1d5cf0aa362008bdcadd 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 319 336 4.5E-5 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS03605 c76269dd716b1d5cf0aa362008bdcadd 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 4.5E-5 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS12125 2313c02b5ff8bd0b210b6aa14e173f39 601 Pfam PF02867 Ribonucleotide reductase, barrel domain 82 575 4.5E-104 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS12125 2313c02b5ff8bd0b210b6aa14e173f39 601 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 24 578 9.7E-148 T 09-03-2017 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NA29_RS12125 2313c02b5ff8bd0b210b6aa14e173f39 601 PRINTS PR01183 Ribonucleotide reductase large chain signature 321 344 5.7E-20 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS12125 2313c02b5ff8bd0b210b6aa14e173f39 601 PRINTS PR01183 Ribonucleotide reductase large chain signature 359 381 5.7E-20 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS12125 2313c02b5ff8bd0b210b6aa14e173f39 601 PRINTS PR01183 Ribonucleotide reductase large chain signature 443 470 5.7E-20 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS12125 2313c02b5ff8bd0b210b6aa14e173f39 601 PRINTS PR01183 Ribonucleotide reductase large chain signature 161 180 5.7E-20 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS12125 2313c02b5ff8bd0b210b6aa14e173f39 601 PRINTS PR01183 Ribonucleotide reductase large chain signature 387 410 5.7E-20 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 NA29_RS12125 2313c02b5ff8bd0b210b6aa14e173f39 601 SUPERFAMILY SSF51998 4 203 3.97E-120 T 09-03-2017 NA29_RS12125 2313c02b5ff8bd0b210b6aa14e173f39 601 SUPERFAMILY SSF51998 247 407 3.97E-120 T 09-03-2017 NA29_RS12125 2313c02b5ff8bd0b210b6aa14e173f39 601 SUPERFAMILY SSF51998 443 589 3.97E-120 T 09-03-2017 NA29_RS12125 2313c02b5ff8bd0b210b6aa14e173f39 601 Gene3D G3DSA:3.20.70.20 4 203 3.2E-99 T 09-03-2017 NA29_RS12125 2313c02b5ff8bd0b210b6aa14e173f39 601 Gene3D G3DSA:3.20.70.20 247 407 3.2E-99 T 09-03-2017 NA29_RS12125 2313c02b5ff8bd0b210b6aa14e173f39 601 Gene3D G3DSA:3.20.70.20 443 490 3.2E-99 T 09-03-2017 NA29_RS12125 2313c02b5ff8bd0b210b6aa14e173f39 601 Gene3D G3DSA:3.20.70.20 534 579 3.2E-99 T 09-03-2017 NA29_RS09015 0f6de7af12d4d944935b885d921c6721 243 Pfam PF01411 tRNA synthetases class II (A) 15 104 1.7E-9 T 09-03-2017 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 NA29_RS09015 0f6de7af12d4d944935b885d921c6721 243 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 196 239 1.6E-11 T 09-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 NA29_RS09015 0f6de7af12d4d944935b885d921c6721 243 SUPERFAMILY SSF55186 104 239 1.24E-27 T 09-03-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 NA29_RS09015 0f6de7af12d4d944935b885d921c6721 243 SUPERFAMILY SSF50447 2 67 2.26E-12 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain NA29_RS09015 0f6de7af12d4d944935b885d921c6721 243 SMART SM00863 196 239 1.2E-13 T 09-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 NA29_RS00225 8749d4965570c2b5c73ebec9ce438cc3 388 ProSitePatterns PS00336 Beta-lactamase class-C active site. 77 84 - T 09-03-2017 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 NA29_RS00225 8749d4965570c2b5c73ebec9ce438cc3 388 Pfam PF00144 Beta-lactamase 29 373 3.0E-75 T 09-03-2017 IPR001466 Beta-lactamase-related NA29_RS00225 8749d4965570c2b5c73ebec9ce438cc3 388 Gene3D G3DSA:3.40.710.10 23 375 4.5E-83 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS00225 8749d4965570c2b5c73ebec9ce438cc3 388 SUPERFAMILY SSF56601 21 376 3.62E-97 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS19360 f103fb4ed4f2286c471409444d0d804e 620 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 204 614 1.9E-91 T 09-03-2017 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit NA29_RS19360 f103fb4ed4f2286c471409444d0d804e 620 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 36 162 5.2E-30 T 09-03-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component NA29_RS19360 f103fb4ed4f2286c471409444d0d804e 620 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 212 616 9.2E-84 T 09-03-2017 IPR004681 TRAP transporter permease protein GO:0016021 NA29_RS23580 52c43b758efd74003606161ed533a57a 561 SUPERFAMILY SSF90123 12 329 2.49E-23 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NA29_RS23580 52c43b758efd74003606161ed533a57a 561 Pfam PF06472 ABC transporter transmembrane region 2 5 282 2.6E-64 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NA29_RS23580 52c43b758efd74003606161ed533a57a 561 Pfam PF00005 ABC transporter 373 504 7.0E-19 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS23580 52c43b758efd74003606161ed533a57a 561 Gene3D G3DSA:3.40.50.300 370 547 4.4E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23580 52c43b758efd74003606161ed533a57a 561 Gene3D G3DSA:1.20.1560.10 13 333 9.5E-12 T 09-03-2017 NA29_RS23580 52c43b758efd74003606161ed533a57a 561 SMART SM00382 378 558 8.4E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS23580 52c43b758efd74003606161ed533a57a 561 SUPERFAMILY SSF52540 353 547 4.9E-35 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06185 df8ca130958f181d6ef1a544ebc8f774 388 Pfam PF14031 Putative serine dehydratase domain 279 370 1.1E-17 T 09-03-2017 IPR026956 D-serine dehydratase-like domain NA29_RS06185 df8ca130958f181d6ef1a544ebc8f774 388 SUPERFAMILY SSF51419 35 269 1.64E-37 T 09-03-2017 IPR029066 PLP-binding barrel NA29_RS06185 df8ca130958f181d6ef1a544ebc8f774 388 SMART SM01119 278 371 1.1E-23 T 09-03-2017 IPR026956 D-serine dehydratase-like domain NA29_RS06185 df8ca130958f181d6ef1a544ebc8f774 388 Gene3D G3DSA:3.20.20.10 69 264 5.7E-22 T 09-03-2017 IPR029066 PLP-binding barrel NA29_RS06185 df8ca130958f181d6ef1a544ebc8f774 388 Pfam PF01168 Alanine racemase, N-terminal domain 35 260 2.8E-29 T 09-03-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS10255 1caa2c94e7c846061d5123afab1471fa 302 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 297 36.031 T 09-03-2017 IPR007476 Putative exonuclease, RdgC GO:0006310 NA29_RS10255 1caa2c94e7c846061d5123afab1471fa 302 Pfam PF04381 Putative exonuclease, RdgC 1 295 1.7E-114 T 09-03-2017 IPR007476 Putative exonuclease, RdgC GO:0006310 NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 SUPERFAMILY SSF52540 173 425 1.17E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 566 584 1.2E-38 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 613 1.2E-38 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 537 555 1.2E-38 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 495 513 1.2E-38 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 Gene3D G3DSA:1.10.8.60 355 439 3.8E-30 T 09-03-2017 NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 SMART SM01086 657 747 2.6E-30 T 09-03-2017 IPR019489 Clp ATPase, C-terminal NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 Gene3D G3DSA:3.40.50.300 173 354 3.6E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 Gene3D G3DSA:1.10.8.60 669 747 7.2E-27 T 09-03-2017 NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 306 318 - T 09-03-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 4.0E-15 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 Pfam PF07724 AAA domain (Cdc48 subfamily) 490 651 2.1E-47 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 SUPERFAMILY SSF81923 1 143 1.12E-57 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 Gene3D G3DSA:3.40.50.300 447 668 1.1E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 738 0.0 T 09-03-2017 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 SMART SM00382 491 640 5.8E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 SMART SM00382 210 354 8.7E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 SUPERFAMILY SSF52540 441 743 1.42E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 Gene3D G3DSA:1.10.1780.10 1 143 1.6E-42 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 522 540 - T 09-03-2017 IPR028299 ClpA/B, conserved site 2 NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 657 737 3.2E-21 T 09-03-2017 IPR019489 Clp ATPase, C-terminal NA29_RS19965 1f80c169806e77b8d607ffb5a679d8ab 765 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 215 328 7.7E-13 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 NA29_RS06230 3d191fd07611e162677ba47577d5f955 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 8.5E-52 T 09-03-2017 NA29_RS06230 3d191fd07611e162677ba47577d5f955 253 Gene3D G3DSA:3.40.50.720 2 250 9.6E-65 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS06230 3d191fd07611e162677ba47577d5f955 253 SUPERFAMILY SSF51735 6 250 2.47E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS06230 3d191fd07611e162677ba47577d5f955 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.2E-25 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS06230 3d191fd07611e162677ba47577d5f955 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 5.2E-25 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS06230 3d191fd07611e162677ba47577d5f955 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.2E-25 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS06230 3d191fd07611e162677ba47577d5f955 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.2E-25 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS06230 3d191fd07611e162677ba47577d5f955 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 5.2E-25 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS06230 3d191fd07611e162677ba47577d5f955 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 5.2E-25 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08215 23fee07fbeaa60ed65d8d416ef715573 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 29 6.7E-29 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 NA29_RS08215 23fee07fbeaa60ed65d8d416ef715573 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 362 374 6.7E-29 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 NA29_RS08215 23fee07fbeaa60ed65d8d416ef715573 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 46 58 6.7E-29 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 NA29_RS08215 23fee07fbeaa60ed65d8d416ef715573 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 91 103 6.7E-29 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 NA29_RS08215 23fee07fbeaa60ed65d8d416ef715573 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 30 40 6.7E-29 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 NA29_RS08215 23fee07fbeaa60ed65d8d416ef715573 513 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 328 334 6.7E-29 T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 NA29_RS08215 23fee07fbeaa60ed65d8d416ef715573 513 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 396 503 8.8E-12 T 09-03-2017 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 NA29_RS08215 23fee07fbeaa60ed65d8d416ef715573 513 Pfam PF01266 FAD dependent oxidoreductase 18 335 1.2E-52 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS08215 23fee07fbeaa60ed65d8d416ef715573 513 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 367 377 - T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 NA29_RS08215 23fee07fbeaa60ed65d8d416ef715573 513 Gene3D G3DSA:3.50.50.60 301 321 1.0E-39 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08215 23fee07fbeaa60ed65d8d416ef715573 513 Gene3D G3DSA:3.50.50.60 17 266 1.0E-39 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08215 23fee07fbeaa60ed65d8d416ef715573 513 SUPERFAMILY SSF51905 17 314 2.59E-35 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08215 23fee07fbeaa60ed65d8d416ef715573 513 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 22 39 - T 09-03-2017 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-535734 NA29_RS20215 a4a38b81dec1eda48026031a10eade13 177 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 20 165 1.7E-36 T 09-03-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 NA29_RS20215 a4a38b81dec1eda48026031a10eade13 177 SUPERFAMILY SSF52540 48 152 5.62E-21 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20215 a4a38b81dec1eda48026031a10eade13 177 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 21 152 5.4E-36 T 09-03-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 NA29_RS20215 a4a38b81dec1eda48026031a10eade13 177 Gene3D G3DSA:3.40.50.300 17 175 9.0E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS21415 cb7417bc9ff19aac0815197d8b9d5cb8 348 Pfam PF03969 AFG1-like ATPase 40 342 1.2E-71 T 09-03-2017 IPR005654 ATPase, AFG1-like GO:0005524 NA29_RS21415 cb7417bc9ff19aac0815197d8b9d5cb8 348 Gene3D G3DSA:3.40.50.300 18 171 3.8E-13 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS21415 cb7417bc9ff19aac0815197d8b9d5cb8 348 SUPERFAMILY SSF52540 42 163 3.19E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02945 170f14063894d71703e831726047ae9c 581 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 379 553 1.6E-7 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS02945 170f14063894d71703e831726047ae9c 581 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 280 8.6E-10 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS02945 170f14063894d71703e831726047ae9c 581 SUPERFAMILY SSF161098 311 552 2.34E-33 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS02945 170f14063894d71703e831726047ae9c 581 SUPERFAMILY SSF161098 25 276 8.24E-47 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS02945 170f14063894d71703e831726047ae9c 581 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 28 569 1.2E-237 T 09-03-2017 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative NA29_RS02945 170f14063894d71703e831726047ae9c 581 Gene3D G3DSA:1.10.3720.10 305 555 2.1E-29 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS02945 170f14063894d71703e831726047ae9c 581 Gene3D G3DSA:1.10.3720.10 30 284 2.2E-47 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS18320 44bf543f98f6304bee6fffe8fd177888 195 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 6.4E-8 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS18320 44bf543f98f6304bee6fffe8fd177888 195 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 6.4E-8 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS18320 44bf543f98f6304bee6fffe8fd177888 195 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 6.4E-8 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS18320 44bf543f98f6304bee6fffe8fd177888 195 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 6.4E-8 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS18320 44bf543f98f6304bee6fffe8fd177888 195 SMART SM00347 28 128 4.7E-13 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS18320 44bf543f98f6304bee6fffe8fd177888 195 Pfam PF12802 MarR family 34 91 1.3E-10 T 09-03-2017 NA29_RS18320 44bf543f98f6304bee6fffe8fd177888 195 SUPERFAMILY SSF46785 5 145 1.8E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18320 44bf543f98f6304bee6fffe8fd177888 195 Gene3D G3DSA:1.10.10.10 10 143 2.7E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15790 db1e666487c223eacf322ce31437ffb5 359 Gene3D G3DSA:3.60.60.10 28 330 7.8E-103 T 09-03-2017 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 Reactome: R-HSA-1660662 NA29_RS15790 db1e666487c223eacf322ce31437ffb5 359 SUPERFAMILY SSF56235 28 330 2.55E-98 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS15790 db1e666487c223eacf322ce31437ffb5 359 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 28 315 2.8E-45 T 09-03-2017 IPR029132 Choloylglycine hydrolase/NAAA C-terminal NA29_RS02540 e1368722f245f43d49f91821e87feff1 210 PIRSF PIRSF005413 2 189 3.6E-62 T 09-03-2017 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 NA29_RS02540 e1368722f245f43d49f91821e87feff1 210 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 29 171 8.6E-49 T 09-03-2017 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 NA29_RS02540 e1368722f245f43d49f91821e87feff1 210 SUPERFAMILY SSF110111 55 175 4.05E-44 T 09-03-2017 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02540 e1368722f245f43d49f91821e87feff1 210 Gene3D G3DSA:2.60.370.10 55 182 2.4E-48 T 09-03-2017 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS23585 fd2339919c213889d89b675af434a00c 269 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 20 226 0.005 T 09-03-2017 NA29_RS23585 fd2339919c213889d89b675af434a00c 269 SUPERFAMILY SSF51735 18 269 2.53E-64 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS23585 fd2339919c213889d89b675af434a00c 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 26 268 2.6E-50 T 09-03-2017 NA29_RS23585 fd2339919c213889d89b675af434a00c 269 Gene3D G3DSA:3.40.50.720 18 269 2.0E-66 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS23585 fd2339919c213889d89b675af434a00c 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 100 111 3.5E-5 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS23585 fd2339919c213889d89b675af434a00c 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 176 195 3.5E-5 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS23585 fd2339919c213889d89b675af434a00c 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 161 3.5E-5 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS23585 fd2339919c213889d89b675af434a00c 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 38 2.2E-33 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS23585 fd2339919c213889d89b675af434a00c 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 214 2.2E-33 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS23585 fd2339919c213889d89b675af434a00c 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 195 2.2E-33 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS23585 fd2339919c213889d89b675af434a00c 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 231 251 2.2E-33 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS23585 fd2339919c213889d89b675af434a00c 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 100 111 2.2E-33 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS23585 fd2339919c213889d89b675af434a00c 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 163 2.2E-33 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16525 3e212a5cb82a8966bc25e541621c1223 536 TIGRFAM TIGR03801 asp_4_decarbox: aspartate 4-decarboxylase 12 525 2.9E-234 T 09-03-2017 IPR022518 Aspartate 4-decarboxylase KEGG: 00220+2.6.1.1|KEGG: 00250+4.1.1.12+2.6.1.1|KEGG: 00270+4.1.1.12+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 NA29_RS16525 3e212a5cb82a8966bc25e541621c1223 536 SUPERFAMILY SSF53383 119 349 2.21E-47 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS16525 3e212a5cb82a8966bc25e541621c1223 536 SUPERFAMILY SSF53383 379 522 2.21E-47 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS16525 3e212a5cb82a8966bc25e541621c1223 536 Gene3D G3DSA:3.90.1150.10 379 522 1.2E-10 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS16525 3e212a5cb82a8966bc25e541621c1223 536 Pfam PF00155 Aminotransferase class I and II 174 506 2.5E-25 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS16525 3e212a5cb82a8966bc25e541621c1223 536 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 312 325 - T 09-03-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 NA29_RS16525 3e212a5cb82a8966bc25e541621c1223 536 Gene3D G3DSA:3.40.640.10 133 347 4.0E-35 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS00290 ac300f10aef53e7f5e5fb5f9249d4198 438 Gene3D G3DSA:3.90.1150.10 303 437 1.3E-47 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS00290 ac300f10aef53e7f5e5fb5f9249d4198 438 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 20 436 2.5E-140 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 NA29_RS00290 ac300f10aef53e7f5e5fb5f9249d4198 438 SUPERFAMILY SSF53383 17 437 3.06E-128 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS00290 ac300f10aef53e7f5e5fb5f9249d4198 438 PIRSF PIRSF001434 5 438 5.3E-129 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 NA29_RS00290 ac300f10aef53e7f5e5fb5f9249d4198 438 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 19 436 8.1E-196 T 09-03-2017 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 NA29_RS00290 ac300f10aef53e7f5e5fb5f9249d4198 438 Gene3D G3DSA:3.40.640.10 18 301 1.0E-119 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS00290 ac300f10aef53e7f5e5fb5f9249d4198 438 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 212 226 - T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 NA29_RS09975 84e9e96679f15d3614bfe96d371d9293 405 Gene3D G3DSA:3.90.1150.10 270 401 7.2E-30 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS09975 84e9e96679f15d3614bfe96d371d9293 405 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 21 400 2.9E-86 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 NA29_RS09975 84e9e96679f15d3614bfe96d371d9293 405 PIRSF PIRSF001434 6 402 2.2E-108 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 NA29_RS09975 84e9e96679f15d3614bfe96d371d9293 405 Gene3D G3DSA:3.40.640.10 20 267 4.7E-72 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS09975 84e9e96679f15d3614bfe96d371d9293 405 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 21 401 3.8E-119 T 09-03-2017 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 NA29_RS09975 84e9e96679f15d3614bfe96d371d9293 405 SUPERFAMILY SSF53383 35 400 4.21E-88 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS09040 91f2b7e536cf250b2331c31f81b6fb05 144 Pfam PF01219 Prokaryotic diacylglycerol kinase 30 129 9.9E-33 T 09-03-2017 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 NA29_RS09040 91f2b7e536cf250b2331c31f81b6fb05 144 Gene3D G3DSA:1.10.3830.10 17 134 6.5E-43 T 09-03-2017 NA29_RS13200 5457e31368de87e8e3e9aaca191a6960 362 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 121 149 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 NA29_RS13200 5457e31368de87e8e3e9aaca191a6960 362 SUPERFAMILY SSF51161 41 335 9.58E-80 T 09-03-2017 IPR011004 Trimeric LpxA-like NA29_RS13200 5457e31368de87e8e3e9aaca191a6960 362 Gene3D G3DSA:2.160.10.10 112 164 2.8E-15 T 09-03-2017 NA29_RS13200 5457e31368de87e8e3e9aaca191a6960 362 Gene3D G3DSA:2.160.10.10 165 225 1.5E-16 T 09-03-2017 NA29_RS13200 5457e31368de87e8e3e9aaca191a6960 362 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 279 306 1.5E-4 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS13200 5457e31368de87e8e3e9aaca191a6960 362 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 274 302 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 NA29_RS13200 5457e31368de87e8e3e9aaca191a6960 362 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 32 101 2.8E-20 T 09-03-2017 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 NA29_RS13200 5457e31368de87e8e3e9aaca191a6960 362 Gene3D G3DSA:2.160.10.10 226 361 1.2E-23 T 09-03-2017 NA29_RS13200 5457e31368de87e8e3e9aaca191a6960 362 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 160 194 2.6E-8 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS13200 5457e31368de87e8e3e9aaca191a6960 362 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 241 276 3.0E-7 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS13200 5457e31368de87e8e3e9aaca191a6960 362 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 114 146 1.7E-5 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS13200 5457e31368de87e8e3e9aaca191a6960 362 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 17 348 4.8E-116 T 09-03-2017 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 NA29_RS13200 5457e31368de87e8e3e9aaca191a6960 362 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 18 345 37.681 T 09-03-2017 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 NA29_RS22665 11620df0c621892c13baf190fe0425b8 278 SUPERFAMILY SSF52833 138 269 2.9E-35 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS22665 11620df0c621892c13baf190fe0425b8 278 Gene3D G3DSA:3.40.30.10 130 270 1.2E-38 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS22665 11620df0c621892c13baf190fe0425b8 278 ProSitePatterns PS00194 Thioredoxin family active site. 161 179 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 NA29_RS22665 11620df0c621892c13baf190fe0425b8 278 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 14 119 1.7E-8 T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 NA29_RS22665 11620df0c621892c13baf190fe0425b8 278 Pfam PF00578 AhpC/TSA family 137 247 5.5E-16 T 09-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 NA29_RS22930 af4e9d02b31622c3c067508e4efa652c 569 Gene3D G3DSA:3.50.50.60 170 268 2.8E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS22930 af4e9d02b31622c3c067508e4efa652c 569 Gene3D G3DSA:3.50.50.60 14 126 2.8E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS22930 af4e9d02b31622c3c067508e4efa652c 569 Gene3D G3DSA:3.50.50.60 469 550 2.8E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS22930 af4e9d02b31622c3c067508e4efa652c 569 Pfam PF05199 GMC oxidoreductase 419 543 1.1E-23 T 09-03-2017 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 NA29_RS22930 af4e9d02b31622c3c067508e4efa652c 569 Pfam PF01266 FAD dependent oxidoreductase 17 234 7.6E-7 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS22930 af4e9d02b31622c3c067508e4efa652c 569 SUPERFAMILY SSF51905 14 272 2.36E-41 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS22930 af4e9d02b31622c3c067508e4efa652c 569 SUPERFAMILY SSF51905 492 551 2.36E-41 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS21255 d9a640174c2ed50e8de9aeefbf74297f 300 Pfam PF00535 Glycosyl transferase family 2 3 105 5.1E-14 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 NA29_RS21255 d9a640174c2ed50e8de9aeefbf74297f 300 SUPERFAMILY SSF53448 1 238 1.05E-31 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS21255 d9a640174c2ed50e8de9aeefbf74297f 300 Gene3D G3DSA:3.90.550.10 2 227 5.0E-26 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS13380 aaa248477d6e4e810413745cc46c8087 628 SUPERFAMILY SSF52540 146 435 4.14E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13380 aaa248477d6e4e810413745cc46c8087 628 Pfam PF00271 Helicase conserved C-terminal domain 309 414 6.8E-27 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS13380 aaa248477d6e4e810413745cc46c8087 628 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 225 233 - T 09-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site NA29_RS13380 aaa248477d6e4e810413745cc46c8087 628 Gene3D G3DSA:3.40.50.300 30 291 6.3E-78 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13380 aaa248477d6e4e810413745cc46c8087 628 Pfam PF00270 DEAD/DEAH box helicase 65 262 1.5E-46 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 NA29_RS13380 aaa248477d6e4e810413745cc46c8087 628 Gene3D G3DSA:3.40.50.300 292 442 6.0E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13380 aaa248477d6e4e810413745cc46c8087 628 SMART SM00487 60 296 4.1E-55 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain NA29_RS13380 aaa248477d6e4e810413745cc46c8087 628 SMART SM00490 333 414 1.4E-33 T 09-03-2017 IPR001650 Helicase, C-terminal NA29_RS18780 ce1c2ae6c5d97c291e73d6e4915fc919 312 Pfam PF01904 Protein of unknown function DUF72 67 306 1.7E-58 T 09-03-2017 IPR002763 Protein of unknown function DUF72 NA29_RS18780 ce1c2ae6c5d97c291e73d6e4915fc919 312 SUPERFAMILY SSF117396 49 308 1.44E-70 T 09-03-2017 IPR002763 Protein of unknown function DUF72 NA29_RS18780 ce1c2ae6c5d97c291e73d6e4915fc919 312 Gene3D G3DSA:3.20.20.410 48 309 2.8E-75 T 09-03-2017 IPR002763 Protein of unknown function DUF72 NA29_RS03785 c9189914414f8c69b1123dead09658cb 313 SUPERFAMILY SSF53474 15 278 4.05E-21 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS03785 c9189914414f8c69b1123dead09658cb 313 PIRSF PIRSF037442 6 296 1.2E-85 T 09-03-2017 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 NA29_RS03785 c9189914414f8c69b1123dead09658cb 313 Gene3D G3DSA:3.40.50.1820 16 291 2.2E-21 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS13340 d90f0d517528b621eab31cbdc3e4fca1 457 Hamap MF_01498 DNA repair protein RadA [radA]. 21 455 44.141 T 09-03-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 NA29_RS13340 d90f0d517528b621eab31cbdc3e4fca1 457 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 451 8.1E-193 T 09-03-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 NA29_RS13340 d90f0d517528b621eab31cbdc3e4fca1 457 Pfam PF13481 AAA domain 60 222 3.0E-19 T 09-03-2017 NA29_RS13340 d90f0d517528b621eab31cbdc3e4fca1 457 SUPERFAMILY SSF52540 64 290 2.1E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13340 d90f0d517528b621eab31cbdc3e4fca1 457 PRINTS PR01874 DNA repair protein radA signature 119 136 9.9E-95 T 09-03-2017 NA29_RS13340 d90f0d517528b621eab31cbdc3e4fca1 457 PRINTS PR01874 DNA repair protein radA signature 322 345 9.9E-95 T 09-03-2017 NA29_RS13340 d90f0d517528b621eab31cbdc3e4fca1 457 PRINTS PR01874 DNA repair protein radA signature 248 274 9.9E-95 T 09-03-2017 NA29_RS13340 d90f0d517528b621eab31cbdc3e4fca1 457 PRINTS PR01874 DNA repair protein radA signature 10 34 9.9E-95 T 09-03-2017 NA29_RS13340 d90f0d517528b621eab31cbdc3e4fca1 457 PRINTS PR01874 DNA repair protein radA signature 78 106 9.9E-95 T 09-03-2017 NA29_RS13340 d90f0d517528b621eab31cbdc3e4fca1 457 PRINTS PR01874 DNA repair protein radA signature 174 198 9.9E-95 T 09-03-2017 NA29_RS13340 d90f0d517528b621eab31cbdc3e4fca1 457 PRINTS PR01874 DNA repair protein radA signature 213 241 9.9E-95 T 09-03-2017 NA29_RS13340 d90f0d517528b621eab31cbdc3e4fca1 457 Gene3D G3DSA:3.30.230.10 284 454 2.9E-32 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup NA29_RS13340 d90f0d517528b621eab31cbdc3e4fca1 457 SUPERFAMILY SSF54211 303 455 1.21E-39 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS13340 d90f0d517528b621eab31cbdc3e4fca1 457 SUPERFAMILY SSF54211 255 269 1.21E-39 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold NA29_RS13340 d90f0d517528b621eab31cbdc3e4fca1 457 Gene3D G3DSA:3.40.50.300 55 275 1.0E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13340 d90f0d517528b621eab31cbdc3e4fca1 457 SMART SM00382 86 244 2.1E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS19925 a57c49dd69960fa9e5935f544ade7179 219 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 09-03-2017 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS19925 a57c49dd69960fa9e5935f544ade7179 219 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 190 1.7E-69 T 09-03-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 NA29_RS19925 a57c49dd69960fa9e5935f544ade7179 219 SUPERFAMILY SSF53328 2 201 1.28E-64 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS19925 a57c49dd69960fa9e5935f544ade7179 219 Pfam PF00551 Formyl transferase 2 181 1.4E-55 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS19925 a57c49dd69960fa9e5935f544ade7179 219 Gene3D G3DSA:3.40.50.170 1 193 7.9E-71 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS19925 a57c49dd69960fa9e5935f544ade7179 219 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 187 31.541 T 09-03-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 NA29_RS14960 98e230c7c718e51d49ea3b1fbd3c7b87 111 SUPERFAMILY SSF160113 3 60 2.35E-16 T 09-03-2017 IPR010879 Domain of unknown function DUF1508 NA29_RS14960 98e230c7c718e51d49ea3b1fbd3c7b87 111 Gene3D G3DSA:3.30.160.160 3 49 1.2E-16 T 09-03-2017 IPR010879 Domain of unknown function DUF1508 NA29_RS14960 98e230c7c718e51d49ea3b1fbd3c7b87 111 Gene3D G3DSA:3.30.160.160 55 99 9.3E-16 T 09-03-2017 IPR010879 Domain of unknown function DUF1508 NA29_RS14960 98e230c7c718e51d49ea3b1fbd3c7b87 111 Pfam PF07411 Domain of unknown function (DUF1508) 62 108 8.6E-17 T 09-03-2017 IPR010879 Domain of unknown function DUF1508 NA29_RS14960 98e230c7c718e51d49ea3b1fbd3c7b87 111 Pfam PF07411 Domain of unknown function (DUF1508) 12 57 5.6E-16 T 09-03-2017 IPR010879 Domain of unknown function DUF1508 NA29_RS14960 98e230c7c718e51d49ea3b1fbd3c7b87 111 SUPERFAMILY SSF160113 54 108 3.53E-14 T 09-03-2017 IPR010879 Domain of unknown function DUF1508 NA29_RS17275 b811656f06ec70b675b11fd2499e395b 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 283 1.0E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS17275 b811656f06ec70b675b11fd2499e395b 289 SUPERFAMILY SSF161098 93 274 4.58E-34 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS17275 b811656f06ec70b675b11fd2499e395b 289 Gene3D G3DSA:1.10.3720.10 94 285 7.5E-29 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS10805 b3105409009a843096703b0cbeeefe99 216 SUPERFAMILY SSF48498 96 173 2.09E-6 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS10805 b3105409009a843096703b0cbeeefe99 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 7.1E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS10805 b3105409009a843096703b0cbeeefe99 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 7.1E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS10805 b3105409009a843096703b0cbeeefe99 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 1.2E-9 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS10805 b3105409009a843096703b0cbeeefe99 216 SUPERFAMILY SSF46689 10 82 1.39E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS10805 b3105409009a843096703b0cbeeefe99 216 Gene3D G3DSA:1.10.357.10 4 177 1.5E-30 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS01360 45135ef8ade32f91173ec2f908d211cd 359 Pfam PF01963 TraB family 96 357 6.7E-49 T 09-03-2017 IPR002816 Pheromone shutdown, TraB NA29_RS09865 def63213b014e61b3788f417af5a4a5f 362 SUPERFAMILY SSF48452 111 232 2.14E-16 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS09865 def63213b014e61b3788f417af5a4a5f 362 Gene3D G3DSA:1.25.40.10 62 261 8.1E-18 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS09865 def63213b014e61b3788f417af5a4a5f 362 Pfam PF13432 Tetratricopeptide repeat 112 172 2.4E-7 T 09-03-2017 NA29_RS09865 def63213b014e61b3788f417af5a4a5f 362 SMART SM00028 139 172 4.6 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS09865 def63213b014e61b3788f417af5a4a5f 362 SMART SM00028 173 206 28.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS10515 8310278c749e8f37c2a1fe6108cdc5c0 224 SMART SM00248 59 89 100.0 T 09-03-2017 IPR002110 Ankyrin repeat GO:0005515 NA29_RS10515 8310278c749e8f37c2a1fe6108cdc5c0 224 SMART SM00248 156 185 1.6E-4 T 09-03-2017 IPR002110 Ankyrin repeat GO:0005515 NA29_RS10515 8310278c749e8f37c2a1fe6108cdc5c0 224 SMART SM00248 123 152 1.9E-4 T 09-03-2017 IPR002110 Ankyrin repeat GO:0005515 NA29_RS10515 8310278c749e8f37c2a1fe6108cdc5c0 224 SMART SM00248 26 55 560.0 T 09-03-2017 IPR002110 Ankyrin repeat GO:0005515 NA29_RS10515 8310278c749e8f37c2a1fe6108cdc5c0 224 SMART SM00248 93 122 0.53 T 09-03-2017 IPR002110 Ankyrin repeat GO:0005515 NA29_RS10515 8310278c749e8f37c2a1fe6108cdc5c0 224 Pfam PF12796 Ankyrin repeats (3 copies) 109 185 1.0E-17 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain NA29_RS10515 8310278c749e8f37c2a1fe6108cdc5c0 224 Gene3D G3DSA:1.25.40.20 135 211 1.1E-25 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain NA29_RS10515 8310278c749e8f37c2a1fe6108cdc5c0 224 PRINTS PR01415 Ankyrin repeat signature 124 139 3.9E-6 T 09-03-2017 IPR002110 Ankyrin repeat GO:0005515 NA29_RS10515 8310278c749e8f37c2a1fe6108cdc5c0 224 PRINTS PR01415 Ankyrin repeat signature 172 186 3.9E-6 T 09-03-2017 IPR002110 Ankyrin repeat GO:0005515 NA29_RS10515 8310278c749e8f37c2a1fe6108cdc5c0 224 Gene3D G3DSA:1.25.40.20 27 71 1.6E-7 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain NA29_RS10515 8310278c749e8f37c2a1fe6108cdc5c0 224 Gene3D G3DSA:1.25.40.20 72 134 7.6E-18 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain NA29_RS10515 8310278c749e8f37c2a1fe6108cdc5c0 224 SUPERFAMILY SSF48403 23 210 1.61E-45 T 09-03-2017 IPR020683 Ankyrin repeat-containing domain NA29_RS22130 6b5d52c2a4824898b026539d841590ec 182 Pfam PF01337 Barstar (barnase inhibitor) 87 170 8.9E-25 T 09-03-2017 IPR000468 Barstar (barnase inhibitor) NA29_RS22130 6b5d52c2a4824898b026539d841590ec 182 SUPERFAMILY SSF52038 83 175 4.32E-23 T 09-03-2017 IPR000468 Barstar (barnase inhibitor) NA29_RS22130 6b5d52c2a4824898b026539d841590ec 182 Gene3D G3DSA:3.30.370.10 82 175 5.6E-29 T 09-03-2017 IPR000468 Barstar (barnase inhibitor) NA29_RS14765 420be4da13f6354c3272c9cd44d88d80 291 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 284 37.836 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 NA29_RS14765 420be4da13f6354c3272c9cd44d88d80 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 232 243 6.6E-39 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 NA29_RS14765 420be4da13f6354c3272c9cd44d88d80 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 166 184 6.6E-39 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 NA29_RS14765 420be4da13f6354c3272c9cd44d88d80 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 203 220 6.6E-39 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 NA29_RS14765 420be4da13f6354c3272c9cd44d88d80 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 132 146 6.6E-39 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 NA29_RS14765 420be4da13f6354c3272c9cd44d88d80 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 254 263 6.6E-39 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 NA29_RS14765 420be4da13f6354c3272c9cd44d88d80 291 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 286 3.7E-129 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 NA29_RS14765 420be4da13f6354c3272c9cd44d88d80 291 SUPERFAMILY SSF52096 28 285 5.29E-86 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS14765 420be4da13f6354c3272c9cd44d88d80 291 Pfam PF01039 Carboxyl transferase domain 104 243 4.1E-15 T 09-03-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 NA29_RS14765 420be4da13f6354c3272c9cd44d88d80 291 Gene3D G3DSA:3.90.226.10 21 289 3.8E-71 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS19060 b96959508f3058667fe4c2efc2bf7d47 152 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 148 1.8E-30 T 09-03-2017 IPR007404 LexA-binding, inner membrane-associated putative hydrolase NA29_RS19060 b96959508f3058667fe4c2efc2bf7d47 152 PIRSF PIRSF030780 1 152 1.3E-28 T 09-03-2017 IPR016956 Inner membrane protein YdjM NA29_RS09210 087a3375bf78633299480fdc3550b412 261 Gene3D G3DSA:3.40.390.10 33 257 9.1E-32 T 09-03-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 NA29_RS09210 087a3375bf78633299480fdc3550b412 261 SUPERFAMILY SSF55486 43 258 5.71E-36 T 09-03-2017 NA29_RS09210 087a3375bf78633299480fdc3550b412 261 Pfam PF06167 Glucose-regulated metallo-peptidase M90 16 257 1.7E-83 T 09-03-2017 IPR010384 MtfA family NA29_RS04590 acd032124d682833d2dc4b950ca94d3e 356 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 33 335 2.5E-146 T 09-03-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 NA29_RS04590 acd032124d682833d2dc4b950ca94d3e 356 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 356 183.622 T 09-03-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 NA29_RS04590 acd032124d682833d2dc4b950ca94d3e 356 Gene3D G3DSA:3.40.50.300 29 185 3.0E-35 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS04590 acd032124d682833d2dc4b950ca94d3e 356 SUPERFAMILY SSF52540 29 260 1.14E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS04590 acd032124d682833d2dc4b950ca94d3e 356 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 19 244 8.9E-118 T 09-03-2017 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 NA29_RS04590 acd032124d682833d2dc4b950ca94d3e 356 SMART SM00382 60 187 5.8E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS04590 acd032124d682833d2dc4b950ca94d3e 356 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 259 339 2.0E-36 T 09-03-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 NA29_RS04590 acd032124d682833d2dc4b950ca94d3e 356 SUPERFAMILY SSF46785 265 339 8.55E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04590 acd032124d682833d2dc4b950ca94d3e 356 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 262 335 8.3E-33 T 09-03-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 NA29_RS04590 acd032124d682833d2dc4b950ca94d3e 356 Gene3D G3DSA:1.10.8.60 192 263 7.0E-32 T 09-03-2017 NA29_RS04590 acd032124d682833d2dc4b950ca94d3e 356 Gene3D G3DSA:1.10.10.10 266 336 6.8E-35 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS17435 c75495f517772c0f552ccddaf756fe8b 216 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 40 206 1.0E-42 T 09-03-2017 IPR004564 Outer membrane lipoprotein carrier protein LolA-like NA29_RS17435 c75495f517772c0f552ccddaf756fe8b 216 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 18 213 3.6E-16 T 09-03-2017 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 NA29_RS17435 c75495f517772c0f552ccddaf756fe8b 216 Gene3D G3DSA:2.50.20.10 32 215 4.3E-65 T 09-03-2017 NA29_RS17435 c75495f517772c0f552ccddaf756fe8b 216 SUPERFAMILY SSF89392 32 215 3.92E-46 T 09-03-2017 IPR029046 Lipoprotein localisation LolA/LolB/LppX NA29_RS17435 c75495f517772c0f552ccddaf756fe8b 216 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 15 216 28.702 T 09-03-2017 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 NA29_RS03770 ed59102fbce79f56c9e1792d75293434 274 SMART SM00346 24 114 1.2E-9 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS03770 ed59102fbce79f56c9e1792d75293434 274 Gene3D G3DSA:1.10.10.10 20 92 2.0E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03770 ed59102fbce79f56c9e1792d75293434 274 Pfam PF01614 Bacterial transcriptional regulator 144 260 2.7E-9 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS03770 ed59102fbce79f56c9e1792d75293434 274 Gene3D G3DSA:3.30.450.40 96 267 2.0E-33 T 09-03-2017 IPR029016 GAF domain-like NA29_RS03770 ed59102fbce79f56c9e1792d75293434 274 SUPERFAMILY SSF46785 24 97 9.1E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03770 ed59102fbce79f56c9e1792d75293434 274 SUPERFAMILY SSF55781 90 264 8.5E-29 T 09-03-2017 IPR029016 GAF domain-like NA29_RS03770 ed59102fbce79f56c9e1792d75293434 274 Pfam PF09339 IclR helix-turn-helix domain 26 77 1.6E-14 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS10320 a908b1daf514566dcc71afe5193b2f6e 477 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 370 398 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS10320 a908b1daf514566dcc71afe5193b2f6e 477 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 237 414 9.1E-5 T 09-03-2017 NA29_RS10320 a908b1daf514566dcc71afe5193b2f6e 477 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 383 402 1.8E-6 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10320 a908b1daf514566dcc71afe5193b2f6e 477 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 310 321 1.8E-6 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10320 a908b1daf514566dcc71afe5193b2f6e 477 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 363 371 1.8E-6 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10320 a908b1daf514566dcc71afe5193b2f6e 477 SUPERFAMILY SSF51735 225 473 2.46E-58 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10320 a908b1daf514566dcc71afe5193b2f6e 477 Gene3D G3DSA:3.40.50.720 226 473 3.1E-65 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10320 a908b1daf514566dcc71afe5193b2f6e 477 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 404 421 2.5E-31 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10320 a908b1daf514566dcc71afe5193b2f6e 477 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 310 321 2.5E-31 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10320 a908b1daf514566dcc71afe5193b2f6e 477 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 357 373 2.5E-31 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10320 a908b1daf514566dcc71afe5193b2f6e 477 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 238 255 2.5E-31 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10320 a908b1daf514566dcc71afe5193b2f6e 477 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 383 402 2.5E-31 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10320 a908b1daf514566dcc71afe5193b2f6e 477 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 437 457 2.5E-31 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS10320 a908b1daf514566dcc71afe5193b2f6e 477 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 243 471 9.7E-49 T 09-03-2017 NA29_RS16790 25ee791aa66b0828b27ceed97d4962a5 264 Gene3D G3DSA:3.30.450.40 83 261 1.3E-55 T 09-03-2017 IPR029016 GAF domain-like NA29_RS16790 25ee791aa66b0828b27ceed97d4962a5 264 SUPERFAMILY SSF46785 18 88 1.52E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16790 25ee791aa66b0828b27ceed97d4962a5 264 SUPERFAMILY SSF55781 80 258 1.11E-45 T 09-03-2017 IPR029016 GAF domain-like NA29_RS16790 25ee791aa66b0828b27ceed97d4962a5 264 Pfam PF01614 Bacterial transcriptional regulator 132 254 7.0E-24 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS16790 25ee791aa66b0828b27ceed97d4962a5 264 Pfam PF09339 IclR helix-turn-helix domain 20 67 1.9E-9 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS16790 25ee791aa66b0828b27ceed97d4962a5 264 SMART SM00346 17 104 8.0E-14 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS16790 25ee791aa66b0828b27ceed97d4962a5 264 Gene3D G3DSA:1.10.10.10 14 82 2.3E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20710 0a747d522be79156521aea2ddff99976 190 SUPERFAMILY SSF88659 107 161 2.62E-16 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS20710 0a747d522be79156521aea2ddff99976 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 159 3.5E-25 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS20710 0a747d522be79156521aea2ddff99976 190 Pfam PF08281 Sigma-70, region 4 112 158 1.3E-16 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS20710 0a747d522be79156521aea2ddff99976 190 SUPERFAMILY SSF88946 13 93 2.08E-18 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS20710 0a747d522be79156521aea2ddff99976 190 Pfam PF04542 Sigma-70 region 2 14 75 1.2E-14 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS20710 0a747d522be79156521aea2ddff99976 190 Gene3D G3DSA:1.10.1740.10 13 77 2.5E-18 T 09-03-2017 NA29_RS20710 0a747d522be79156521aea2ddff99976 190 Gene3D G3DSA:1.10.10.10 108 162 7.4E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15625 58a3f6d34b569c39fcc05d278f3c6c58 369 Pfam PF08402 TOBE domain 293 362 8.7E-9 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 NA29_RS15625 58a3f6d34b569c39fcc05d278f3c6c58 369 SMART SM00382 34 219 2.9E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS15625 58a3f6d34b569c39fcc05d278f3c6c58 369 SUPERFAMILY SSF50331 286 362 1.39E-8 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS15625 58a3f6d34b569c39fcc05d278f3c6c58 369 Pfam PF00005 ABC transporter 26 169 4.3E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS15625 58a3f6d34b569c39fcc05d278f3c6c58 369 SUPERFAMILY SSF52540 6 246 3.17E-76 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15625 58a3f6d34b569c39fcc05d278f3c6c58 369 Gene3D G3DSA:3.40.50.300 6 241 9.6E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15625 58a3f6d34b569c39fcc05d278f3c6c58 369 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS08200 410de87d498854d0e5a94b704cfa9956 383 Gene3D G3DSA:3.90.1510.10 49 279 3.4E-70 T 09-03-2017 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 NA29_RS08200 410de87d498854d0e5a94b704cfa9956 383 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 10 377 2.2E-103 T 09-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 NA29_RS08200 410de87d498854d0e5a94b704cfa9956 383 SUPERFAMILY SSF110738 10 379 2.35E-102 T 09-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 NA29_RS08200 410de87d498854d0e5a94b704cfa9956 383 Pfam PF02595 Glycerate kinase family 10 377 5.0E-116 T 09-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 NA29_RS08200 410de87d498854d0e5a94b704cfa9956 383 PIRSF PIRSF006078 9 382 2.4E-99 T 09-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 NA29_RS17885 cc99871c3806372595c163d134a868ae 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 258 2.3E-41 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS17885 cc99871c3806372595c163d134a868ae 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 09-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 NA29_RS17885 cc99871c3806372595c163d134a868ae 259 SUPERFAMILY SSF52096 9 259 2.41E-66 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS17885 cc99871c3806372595c163d134a868ae 259 Gene3D G3DSA:3.90.226.10 9 257 9.4E-63 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS11060 86141c897f3083d4fe81826a1e84c52b 210 Pfam PF13628 Domain of unknown function (DUF4142) 69 201 9.8E-43 T 09-03-2017 IPR025419 Domain of unknown function DUF4142 NA29_RS11060 86141c897f3083d4fe81826a1e84c52b 210 Gene3D G3DSA:1.20.1260.10 62 194 1.2E-12 T 09-03-2017 IPR012347 Ferritin-related NA29_RS04235 61c3fc2afc34609dece3f7cc01391e77 447 PIRSF PIRSF006060 1 445 1.7E-56 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NA29_RS04235 61c3fc2afc34609dece3f7cc01391e77 447 Pfam PF00324 Amino acid permease 23 397 6.0E-37 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 NA29_RS02050 5114828d9a0711c30c65838512b48364 606 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 16 585 0.0 T 09-03-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 NA29_RS02050 5114828d9a0711c30c65838512b48364 606 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 16 577 2.5E-257 T 09-03-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 NA29_RS02050 5114828d9a0711c30c65838512b48364 606 PIRSF PIRSF000719 7 587 9.7E-259 T 09-03-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 NA29_RS02050 5114828d9a0711c30c65838512b48364 606 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 8 582 44.175 T 09-03-2017 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 NA29_RS23325 870ead4710ee72d62cb09ca0e10c3422 139 SUPERFAMILY SSF47413 2 64 9.38E-12 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS23325 870ead4710ee72d62cb09ca0e10c3422 139 SMART SM00530 7 61 1.9E-7 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS23325 870ead4710ee72d62cb09ca0e10c3422 139 Pfam PF01381 Helix-turn-helix 8 54 1.5E-6 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS23325 870ead4710ee72d62cb09ca0e10c3422 139 Gene3D G3DSA:1.10.260.40 3 65 5.4E-13 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS19975 99d22e7ee2f986ef600f870b2aadd209 68 SMART SM00357 3 67 3.9E-33 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 NA29_RS19975 99d22e7ee2f986ef600f870b2aadd209 68 SUPERFAMILY SSF50249 1 66 4.71E-27 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS19975 99d22e7ee2f986ef600f870b2aadd209 68 PRINTS PR00050 Cold shock protein signature 40 58 2.8E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS19975 99d22e7ee2f986ef600f870b2aadd209 68 PRINTS PR00050 Cold shock protein signature 4 19 2.8E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS19975 99d22e7ee2f986ef600f870b2aadd209 68 PRINTS PR00050 Cold shock protein signature 25 34 2.8E-18 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS19975 99d22e7ee2f986ef600f870b2aadd209 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.0E-32 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 NA29_RS19975 99d22e7ee2f986ef600f870b2aadd209 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 09-03-2017 IPR019844 Cold-shock conserved site NA29_RS19975 99d22e7ee2f986ef600f870b2aadd209 68 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 65 6.1E-35 T 09-03-2017 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 NA29_RS19975 99d22e7ee2f986ef600f870b2aadd209 68 PIRSF PIRSF002599 1 68 7.4E-25 T 09-03-2017 IPR012156 Cold shock, CspA GO:0003676 NA29_RS19975 99d22e7ee2f986ef600f870b2aadd209 68 Gene3D G3DSA:2.40.50.140 1 65 3.7E-33 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS00170 421f038764b9602996250a1783b9e4b1 452 Pfam PF06441 Epoxide hydrolase N terminus 65 169 3.9E-36 T 09-03-2017 IPR010497 Epoxide hydrolase, N-terminal KEGG: 00980+3.3.2.9|Reactome: R-HSA-211945 NA29_RS00170 421f038764b9602996250a1783b9e4b1 452 PRINTS PR00412 Epoxide hydrolase signature 393 409 5.1E-11 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS00170 421f038764b9602996250a1783b9e4b1 452 PRINTS PR00412 Epoxide hydrolase signature 235 248 5.1E-11 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS00170 421f038764b9602996250a1783b9e4b1 452 PRINTS PR00412 Epoxide hydrolase signature 425 447 5.1E-11 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS00170 421f038764b9602996250a1783b9e4b1 452 PRINTS PR00412 Epoxide hydrolase signature 161 179 5.1E-11 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS00170 421f038764b9602996250a1783b9e4b1 452 PRINTS PR00412 Epoxide hydrolase signature 190 205 5.1E-11 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS00170 421f038764b9602996250a1783b9e4b1 452 Gene3D G3DSA:3.40.50.1820 57 451 2.4E-129 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS00170 421f038764b9602996250a1783b9e4b1 452 PIRSF PIRSF001112 13 452 4.1E-158 T 09-03-2017 IPR016292 Epoxide hydrolase GO:0033961 KEGG: 00980+3.3.2.9|Reactome: R-HSA-211945 NA29_RS00170 421f038764b9602996250a1783b9e4b1 452 SUPERFAMILY SSF53474 58 450 9.55E-93 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS03850 ee9878b538a883c9d934d855c3a4de16 433 SUPERFAMILY SSF103473 34 424 5.23E-43 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS03850 ee9878b538a883c9d934d855c3a4de16 433 Pfam PF07690 Major Facilitator Superfamily 58 297 2.0E-12 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS03850 ee9878b538a883c9d934d855c3a4de16 433 Gene3D G3DSA:1.20.1250.20 262 422 1.8E-20 T 09-03-2017 NA29_RS03850 ee9878b538a883c9d934d855c3a4de16 433 Gene3D G3DSA:1.20.1250.20 53 224 1.7E-14 T 09-03-2017 NA29_RS09705 889bb4ff6a6360d32904cd6a44836362 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 4 100 1.0E-21 T 09-03-2017 IPR008407 Branched-chain amino acid transport, AzlD NA29_RS01475 5cca6b61220ebabe48129b5efd88a27b 508 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 10 489 6.6E-218 T 09-03-2017 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 NA29_RS01475 5cca6b61220ebabe48129b5efd88a27b 508 SUPERFAMILY SSF53720 6 490 7.07E-152 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS01475 5cca6b61220ebabe48129b5efd88a27b 508 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS01475 5cca6b61220ebabe48129b5efd88a27b 508 Pfam PF00171 Aldehyde dehydrogenase family 29 485 3.6E-148 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS01475 5cca6b61220ebabe48129b5efd88a27b 508 Gene3D G3DSA:3.40.605.10 9 267 9.1E-92 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS01475 5cca6b61220ebabe48129b5efd88a27b 508 Gene3D G3DSA:3.40.309.10 268 458 7.5E-68 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS04720 792d870cf0dcf9abb3c3d42a41f423d0 378 Pfam PF07201 HrpJ-like domain 65 223 8.0E-8 T 09-03-2017 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 NA29_RS04720 792d870cf0dcf9abb3c3d42a41f423d0 378 TIGRFAM TIGR02511 type_III_tyeA: type III secretion effector delivery regulator, TyeA family 296 361 3.0E-9 T 09-03-2017 IPR013351 Type III secretion system effector delivery regulator TyeA-related NA29_RS04720 792d870cf0dcf9abb3c3d42a41f423d0 378 SUPERFAMILY SSF140591 293 363 8.24E-12 T 09-03-2017 NA29_RS02165 2c5088037b7056e24841dcb5b1449162 273 Pfam PF00378 Enoyl-CoA hydratase/isomerase 39 269 1.3E-37 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS02165 2c5088037b7056e24841dcb5b1449162 273 SUPERFAMILY SSF52096 35 267 4.84E-59 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS02165 2c5088037b7056e24841dcb5b1449162 273 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 112 132 - T 09-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 NA29_RS02165 2c5088037b7056e24841dcb5b1449162 273 Gene3D G3DSA:3.90.226.10 3 264 3.2E-56 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS11135 73e895b7170a9519a5cbda805c6bf707 308 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 184 2.5E-45 T 09-03-2017 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 NA29_RS11135 73e895b7170a9519a5cbda805c6bf707 308 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 253 8.3E-13 T 09-03-2017 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 NA29_RS11135 73e895b7170a9519a5cbda805c6bf707 308 SUPERFAMILY SSF48179 187 270 3.91E-14 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS11135 73e895b7170a9519a5cbda805c6bf707 308 Gene3D G3DSA:3.40.50.720 5 188 1.5E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11135 73e895b7170a9519a5cbda805c6bf707 308 Gene3D G3DSA:1.10.1040.10 189 251 5.4E-9 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS11135 73e895b7170a9519a5cbda805c6bf707 308 SUPERFAMILY SSF51735 6 184 1.53E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS01930 37d673f2de31ce6b1097f482d4c04a68 314 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 279 1.0E-46 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NA29_RS01930 37d673f2de31ce6b1097f482d4c04a68 314 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 218 234 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site NA29_RS01930 37d673f2de31ce6b1097f482d4c04a68 314 SUPERFAMILY SSF52283 29 121 1.12E-5 T 09-03-2017 NA29_RS01930 37d673f2de31ce6b1097f482d4c04a68 314 Gene3D G3DSA:3.40.50.720 97 280 2.1E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS01930 37d673f2de31ce6b1097f482d4c04a68 314 SUPERFAMILY SSF51735 100 278 9.07E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS21170 966544a506c9d83bfe932be34f462d0b 315 Pfam PF03466 LysR substrate binding domain 99 303 1.6E-20 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS21170 966544a506c9d83bfe932be34f462d0b 315 Gene3D G3DSA:3.40.190.10 102 186 6.7E-22 T 09-03-2017 NA29_RS21170 966544a506c9d83bfe932be34f462d0b 315 SUPERFAMILY SSF53850 99 306 5.25E-25 T 09-03-2017 NA29_RS21170 966544a506c9d83bfe932be34f462d0b 315 Gene3D G3DSA:3.40.190.10 187 272 1.4E-15 T 09-03-2017 NA29_RS21170 966544a506c9d83bfe932be34f462d0b 315 Gene3D G3DSA:1.10.10.10 11 92 2.1E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21170 966544a506c9d83bfe932be34f462d0b 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 9.9E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21170 966544a506c9d83bfe932be34f462d0b 315 SUPERFAMILY SSF46785 12 93 2.84E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS21170 966544a506c9d83bfe932be34f462d0b 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 4.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21170 966544a506c9d83bfe932be34f462d0b 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 4.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS21170 966544a506c9d83bfe932be34f462d0b 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 4.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS22805 181ba01a8b1ad2e8a42a93da6a7f9d0c 291 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 13 290 42.868 T 09-03-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 NA29_RS22805 181ba01a8b1ad2e8a42a93da6a7f9d0c 291 SUPERFAMILY SSF53335 22 287 7.84E-59 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS22805 181ba01a8b1ad2e8a42a93da6a7f9d0c 291 Gene3D G3DSA:3.40.50.150 97 289 6.4E-65 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS22805 181ba01a8b1ad2e8a42a93da6a7f9d0c 291 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 31 288 6.5E-73 T 09-03-2017 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 NA29_RS22805 181ba01a8b1ad2e8a42a93da6a7f9d0c 291 Gene3D G3DSA:1.10.8.10 23 95 1.1E-22 T 09-03-2017 NA29_RS22805 181ba01a8b1ad2e8a42a93da6a7f9d0c 291 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 35 286 1.5E-87 T 09-03-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 NA29_RS22805 181ba01a8b1ad2e8a42a93da6a7f9d0c 291 Pfam PF13847 Methyltransferase domain 124 266 7.9E-19 T 09-03-2017 IPR025714 Methyltransferase domain NA29_RS22805 181ba01a8b1ad2e8a42a93da6a7f9d0c 291 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 195 201 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NA29_RS20195 7d682b82ee0cab44dac883d05fb3524b 162 Gene3D G3DSA:3.90.960.10 3 158 5.5E-43 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 NA29_RS20195 7d682b82ee0cab44dac883d05fb3524b 162 SUPERFAMILY SSF55826 8 161 5.76E-38 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 NA29_RS20195 7d682b82ee0cab44dac883d05fb3524b 162 Pfam PF04073 Aminoacyl-tRNA editing domain 40 149 1.8E-20 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 NA29_RS20195 7d682b82ee0cab44dac883d05fb3524b 162 PIRSF PIRSF006181 4 160 2.2E-43 T 09-03-2017 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC NA29_RS12560 bea4387a09f5d159a7a0d5487a405cce 377 Gene3D G3DSA:3.20.20.70 12 354 7.0E-65 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS12560 bea4387a09f5d159a7a0d5487a405cce 377 Pfam PF03060 Nitronate monooxygenase 14 359 6.1E-77 T 09-03-2017 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 NA29_RS12560 bea4387a09f5d159a7a0d5487a405cce 377 SUPERFAMILY SSF51412 112 367 1.3E-60 T 09-03-2017 NA29_RS12560 bea4387a09f5d159a7a0d5487a405cce 377 SUPERFAMILY SSF51412 12 82 1.3E-60 T 09-03-2017 NA29_RS04035 ed71dd686441267aec5adb5ee1806ad3 171 Pfam PF01047 MarR family 49 107 8.1E-11 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS04035 ed71dd686441267aec5adb5ee1806ad3 171 SUPERFAMILY SSF46785 19 155 5.1E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04035 ed71dd686441267aec5adb5ee1806ad3 171 SMART SM00347 42 142 3.2E-13 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS04035 ed71dd686441267aec5adb5ee1806ad3 171 Gene3D G3DSA:1.10.10.10 6 153 9.2E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04035 ed71dd686441267aec5adb5ee1806ad3 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 102 118 7.3E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS04035 ed71dd686441267aec5adb5ee1806ad3 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 82 7.3E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS04035 ed71dd686441267aec5adb5ee1806ad3 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 132 152 7.3E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS04035 ed71dd686441267aec5adb5ee1806ad3 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 98 7.3E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS16675 bc4888ea1af64296815eb34498f5a0f5 457 Gene3D G3DSA:1.20.1250.20 239 438 8.0E-28 T 09-03-2017 NA29_RS16675 bc4888ea1af64296815eb34498f5a0f5 457 PIRSF PIRSF002808 7 442 3.8E-37 T 09-03-2017 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 NA29_RS16675 bc4888ea1af64296815eb34498f5a0f5 457 Gene3D G3DSA:1.20.1250.20 11 208 8.9E-45 T 09-03-2017 NA29_RS16675 bc4888ea1af64296815eb34498f5a0f5 457 SUPERFAMILY SSF103473 8 441 2.49E-83 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS16675 bc4888ea1af64296815eb34498f5a0f5 457 Pfam PF07690 Major Facilitator Superfamily 24 392 6.6E-52 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS21870 2f5ebd8790c1f76c56ae044c75820377 142 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 130 1.4E-13 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NA29_RS21870 2f5ebd8790c1f76c56ae044c75820377 142 SUPERFAMILY SSF54593 7 135 5.64E-24 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS21870 2f5ebd8790c1f76c56ae044c75820377 142 Gene3D G3DSA:3.10.180.10 9 133 4.4E-26 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS15180 cf8e1b12ebf34e3c4a52a74d3fcedfd7 310 PIRSF PIRSF012318 40 310 1.1E-89 T 09-03-2017 IPR011197 Uncharacterised conserved protein UCP012318 NA29_RS15180 cf8e1b12ebf34e3c4a52a74d3fcedfd7 310 Pfam PF04305 Protein of unknown function (DUF455) 52 303 7.7E-89 T 09-03-2017 IPR007402 Protein of unknown function DUF455 NA29_RS15180 cf8e1b12ebf34e3c4a52a74d3fcedfd7 310 SUPERFAMILY SSF47240 105 284 3.96E-17 T 09-03-2017 IPR009078 Ferritin-like superfamily NA29_RS13005 bedd70d985ba72e498766304edbff1b8 267 SUPERFAMILY SSF52540 2 248 1.09E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13005 bedd70d985ba72e498766304edbff1b8 267 Gene3D G3DSA:3.40.50.300 2 247 1.3E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13005 bedd70d985ba72e498766304edbff1b8 267 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS13005 bedd70d985ba72e498766304edbff1b8 267 Pfam PF00005 ABC transporter 20 179 1.4E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS13005 bedd70d985ba72e498766304edbff1b8 267 SMART SM00382 29 227 7.1E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS15425 094dcfef322bf726bfae0b70bfc1e2a4 280 Gene3D G3DSA:3.40.50.300 13 199 1.7E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15425 094dcfef322bf726bfae0b70bfc1e2a4 280 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 176 5.9E-14 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 NA29_RS15425 094dcfef322bf726bfae0b70bfc1e2a4 280 SUPERFAMILY SSF52540 8 265 1.19E-35 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15425 094dcfef322bf726bfae0b70bfc1e2a4 280 SMART SM00382 25 183 2.5E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS08105 3c8120264db8d28b2c9c594444f33f86 536 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 453 3.2E-96 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain NA29_RS08105 3c8120264db8d28b2c9c594444f33f86 536 PIRSF PIRSF002741 24 535 1.5E-110 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 NA29_RS08105 3c8120264db8d28b2c9c594444f33f86 536 Gene3D G3DSA:3.90.76.10 40 220 1.0E-45 T 09-03-2017 NA29_RS08105 3c8120264db8d28b2c9c594444f33f86 536 Gene3D G3DSA:3.10.105.10 291 506 1.5E-62 T 09-03-2017 NA29_RS08105 3c8120264db8d28b2c9c594444f33f86 536 SUPERFAMILY SSF53850 32 535 1.99E-141 T 09-03-2017 NA29_RS13810 0eda5d2c7a1b00fb1d820a81037a2be8 449 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 20 449 3.5E-196 T 09-03-2017 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 NA29_RS13810 0eda5d2c7a1b00fb1d820a81037a2be8 449 PIRSF PIRSF000423 10 449 4.5E-191 T 09-03-2017 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 NA29_RS13810 0eda5d2c7a1b00fb1d820a81037a2be8 449 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 449 212.318 T 09-03-2017 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 NA29_RS13810 0eda5d2c7a1b00fb1d820a81037a2be8 449 SUPERFAMILY SSF55729 276 425 3.21E-22 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS13810 0eda5d2c7a1b00fb1d820a81037a2be8 449 Gene3D G3DSA:3.40.630.30 304 448 7.0E-40 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS13810 0eda5d2c7a1b00fb1d820a81037a2be8 449 Pfam PF00583 Acetyltransferase (GNAT) family 348 420 3.5E-10 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS13810 0eda5d2c7a1b00fb1d820a81037a2be8 449 Gene3D G3DSA:3.40.1160.10 35 297 1.5E-67 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase NA29_RS13810 0eda5d2c7a1b00fb1d820a81037a2be8 449 Pfam PF00696 Amino acid kinase family 37 275 5.2E-29 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase NA29_RS13810 0eda5d2c7a1b00fb1d820a81037a2be8 449 SUPERFAMILY SSF53633 16 299 1.3E-68 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase NA29_RS07395 5dccba59a005f48865b131d562de76c2 292 SUPERFAMILY SSF52540 51 261 5.87E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07395 5dccba59a005f48865b131d562de76c2 292 SMART SM00382 61 242 1.1E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS07395 5dccba59a005f48865b131d562de76c2 292 Gene3D G3DSA:3.40.50.300 45 238 1.9E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07395 5dccba59a005f48865b131d562de76c2 292 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS07395 5dccba59a005f48865b131d562de76c2 292 Pfam PF00005 ABC transporter 54 191 1.7E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS08120 3361f34b33fa9f76bce6252fc8f0d241 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 256 5.8E-54 T 09-03-2017 NA29_RS08120 3361f34b33fa9f76bce6252fc8f0d241 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 3.2E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08120 3361f34b33fa9f76bce6252fc8f0d241 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.2E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08120 3361f34b33fa9f76bce6252fc8f0d241 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 3.2E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08120 3361f34b33fa9f76bce6252fc8f0d241 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 3.2E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08120 3361f34b33fa9f76bce6252fc8f0d241 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 3.2E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08120 3361f34b33fa9f76bce6252fc8f0d241 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.2E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08120 3361f34b33fa9f76bce6252fc8f0d241 260 SUPERFAMILY SSF51735 5 258 4.41E-64 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS08120 3361f34b33fa9f76bce6252fc8f0d241 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.6E-10 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08120 3361f34b33fa9f76bce6252fc8f0d241 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.6E-10 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08120 3361f34b33fa9f76bce6252fc8f0d241 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 2.6E-10 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08120 3361f34b33fa9f76bce6252fc8f0d241 260 Gene3D G3DSA:3.40.50.720 5 257 1.9E-68 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS08120 3361f34b33fa9f76bce6252fc8f0d241 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS19420 7ce26642e6e423bb3c3b463a40054640 487 Gene3D G3DSA:3.40.50.300 184 362 3.5E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19420 7ce26642e6e423bb3c3b463a40054640 487 Gene3D G3DSA:3.40.50.300 3 88 3.5E-58 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19420 7ce26642e6e423bb3c3b463a40054640 487 SUPERFAMILY SSF52540 3 363 2.09E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19420 7ce26642e6e423bb3c3b463a40054640 487 Pfam PF05872 Bacterial protein of unknown function (DUF853) 1 486 3.5E-235 T 09-03-2017 IPR033186 Helicase HerA-like C-terminal NA29_RS23930 ef5d5d96de09b619cf138bc6f6ec87ac 251 Gene3D G3DSA:3.40.50.1820 19 248 5.4E-50 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS23930 ef5d5d96de09b619cf138bc6f6ec87ac 251 SUPERFAMILY SSF53474 19 247 9.32E-47 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS23930 ef5d5d96de09b619cf138bc6f6ec87ac 251 Pfam PF01738 Dienelactone hydrolase family 31 247 2.6E-48 T 09-03-2017 IPR002925 Dienelactone hydrolase GO:0016787 NA29_RS16190 8d00bd2dcffedb3675dcc16dfe3992a4 99 Pfam PF12365 Protein of unknown function (DUF3649) 58 83 3.5E-10 T 09-03-2017 IPR022109 Protein of unknown function DUF3649 NA29_RS04160 9f43a92407df3dbbaebefa768024a138 296 Gene3D G3DSA:3.40.190.10 89 181 8.8E-15 T 09-03-2017 NA29_RS04160 9f43a92407df3dbbaebefa768024a138 296 Gene3D G3DSA:3.40.190.10 182 259 6.7E-15 T 09-03-2017 NA29_RS04160 9f43a92407df3dbbaebefa768024a138 296 Pfam PF03466 LysR substrate binding domain 88 291 1.3E-31 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS04160 9f43a92407df3dbbaebefa768024a138 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04160 9f43a92407df3dbbaebefa768024a138 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04160 9f43a92407df3dbbaebefa768024a138 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04160 9f43a92407df3dbbaebefa768024a138 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 3.0E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04160 9f43a92407df3dbbaebefa768024a138 296 Gene3D G3DSA:1.10.10.10 6 88 5.2E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04160 9f43a92407df3dbbaebefa768024a138 296 SUPERFAMILY SSF46785 3 111 5.14E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04160 9f43a92407df3dbbaebefa768024a138 296 SUPERFAMILY SSF53850 85 292 6.21E-35 T 09-03-2017 NA29_RS07910 34931df6ed18ec6c3b50a0285418c6b9 244 SUPERFAMILY SSF102405 26 222 1.53E-57 T 09-03-2017 NA29_RS07910 34931df6ed18ec6c3b50a0285418c6b9 244 Pfam PF03641 Possible lysine decarboxylase 93 222 1.3E-32 T 09-03-2017 IPR031100 LOG family NA29_RS07910 34931df6ed18ec6c3b50a0285418c6b9 244 Gene3D G3DSA:3.40.50.450 29 231 1.9E-61 T 09-03-2017 NA29_RS07910 34931df6ed18ec6c3b50a0285418c6b9 244 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 51 223 9.7E-43 T 09-03-2017 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG NA29_RS23045 5e44ede1511dd6a558d42f7ed340d222 491 Gene3D G3DSA:1.20.1250.20 276 456 1.9E-20 T 09-03-2017 NA29_RS23045 5e44ede1511dd6a558d42f7ed340d222 491 Gene3D G3DSA:1.20.1250.20 31 216 5.7E-31 T 09-03-2017 NA29_RS23045 5e44ede1511dd6a558d42f7ed340d222 491 SUPERFAMILY SSF103473 16 459 5.1E-78 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS23045 5e44ede1511dd6a558d42f7ed340d222 491 Pfam PF00083 Sugar (and other) transporter 67 459 5.7E-45 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS11305 efda7f3730a5d0ac41edda16fa966bbb 247 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 240 5.6E-28 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS11305 efda7f3730a5d0ac41edda16fa966bbb 247 Gene3D G3DSA:1.10.3720.10 44 238 8.5E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS11305 efda7f3730a5d0ac41edda16fa966bbb 247 SUPERFAMILY SSF161098 47 235 3.01E-31 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS03300 8ceffa010db1f9886151ac9dcfba082f 302 Gene3D G3DSA:3.40.50.720 2 106 1.3E-23 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS03300 8ceffa010db1f9886151ac9dcfba082f 302 Gene3D G3DSA:3.40.50.720 107 272 1.1E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS03300 8ceffa010db1f9886151ac9dcfba082f 302 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 98 271 1.4E-49 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 NA29_RS03300 8ceffa010db1f9886151ac9dcfba082f 302 SUPERFAMILY SSF51735 89 272 4.44E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS03300 8ceffa010db1f9886151ac9dcfba082f 302 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 298 1.9E-12 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 NA29_RS03300 8ceffa010db1f9886151ac9dcfba082f 302 SUPERFAMILY SSF52283 2 125 1.79E-22 T 09-03-2017 NA29_RS21265 584575b32486ddca8c6cec6d79f2a6c6 226 Pfam PF01323 DSBA-like thioredoxin domain 21 201 7.1E-29 T 09-03-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 NA29_RS21265 584575b32486ddca8c6cec6d79f2a6c6 226 Gene3D G3DSA:3.40.30.10 18 202 6.5E-45 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS21265 584575b32486ddca8c6cec6d79f2a6c6 226 SUPERFAMILY SSF52833 17 202 2.98E-34 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS21265 584575b32486ddca8c6cec6d79f2a6c6 226 PIRSF PIRSF006386 14 211 2.9E-39 T 09-03-2017 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590 NA29_RS23435 4e78d89fe8f7c64878aaee48e2618606 80 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 77 22.878 T 09-03-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 NA29_RS23435 4e78d89fe8f7c64878aaee48e2618606 80 Pfam PF02416 mttA/Hcf106 family 4 52 4.1E-13 T 09-03-2017 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 NA29_RS23435 4e78d89fe8f7c64878aaee48e2618606 80 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 9.9E-23 T 09-03-2017 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 NA29_RS08135 27ac03b8eb5673141e8baa77b1890dbc 275 PIRSF PIRSF000126 1 267 1.7E-73 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08135 27ac03b8eb5673141e8baa77b1890dbc 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 NA29_RS08135 27ac03b8eb5673141e8baa77b1890dbc 275 Pfam PF00106 short chain dehydrogenase 12 197 1.6E-42 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08135 27ac03b8eb5673141e8baa77b1890dbc 275 SUPERFAMILY SSF51735 10 233 4.0E-56 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS08135 27ac03b8eb5673141e8baa77b1890dbc 275 Gene3D G3DSA:3.40.50.720 12 230 1.5E-56 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS08135 27ac03b8eb5673141e8baa77b1890dbc 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 6.3E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08135 27ac03b8eb5673141e8baa77b1890dbc 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 6.3E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08135 27ac03b8eb5673141e8baa77b1890dbc 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 6.3E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08135 27ac03b8eb5673141e8baa77b1890dbc 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 6.3E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08135 27ac03b8eb5673141e8baa77b1890dbc 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 6.3E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08135 27ac03b8eb5673141e8baa77b1890dbc 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 4.1E-10 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08135 27ac03b8eb5673141e8baa77b1890dbc 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 4.1E-10 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS08135 27ac03b8eb5673141e8baa77b1890dbc 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 4.1E-10 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS15335 130519d9854616658a790b02502fad59 66 Pfam PF12088 Protein of unknown function (DUF3565) 6 61 8.6E-29 T 09-03-2017 IPR021948 Protein of unknown function DUF3565 NA29_RS19015 1de09dfeb0c0fb1b06da50ac622aeffa 504 Gene3D G3DSA:1.20.1250.20 18 199 1.0E-25 T 09-03-2017 NA29_RS19015 1de09dfeb0c0fb1b06da50ac622aeffa 504 SUPERFAMILY SSF103473 477 501 1.09E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS19015 1de09dfeb0c0fb1b06da50ac622aeffa 504 SUPERFAMILY SSF103473 257 427 1.09E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS19015 1de09dfeb0c0fb1b06da50ac622aeffa 504 SUPERFAMILY SSF103473 11 204 1.09E-60 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS19015 1de09dfeb0c0fb1b06da50ac622aeffa 504 Gene3D G3DSA:1.20.1250.20 265 428 5.8E-21 T 09-03-2017 NA29_RS19015 1de09dfeb0c0fb1b06da50ac622aeffa 504 Gene3D G3DSA:1.20.1250.20 474 491 5.8E-21 T 09-03-2017 NA29_RS19015 1de09dfeb0c0fb1b06da50ac622aeffa 504 Pfam PF07690 Major Facilitator Superfamily 27 417 1.0E-46 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS20295 a12b8459762c56397ff54dd1edbd320f 170 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 132 2.3E-37 T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 NA29_RS20295 a12b8459762c56397ff54dd1edbd320f 170 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 132 6.0E-34 T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 NA29_RS20295 a12b8459762c56397ff54dd1edbd320f 170 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 87 98 - T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 NA29_RS20295 a12b8459762c56397ff54dd1edbd320f 170 Gene3D G3DSA:3.30.70.560 3 152 4.0E-50 T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 NA29_RS20295 a12b8459762c56397ff54dd1edbd320f 170 SUPERFAMILY SSF55083 1 146 6.67E-48 T 09-03-2017 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 NA29_RS03630 dea10ddbcb687b6faf234f50260e230e 339 SUPERFAMILY SSF52151 1 80 2.25E-51 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NA29_RS03630 dea10ddbcb687b6faf234f50260e230e 339 SUPERFAMILY SSF52151 111 320 2.25E-51 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NA29_RS03630 dea10ddbcb687b6faf234f50260e230e 339 Gene3D G3DSA:3.40.1090.10 1 204 3.0E-9 T 09-03-2017 NA29_RS03630 dea10ddbcb687b6faf234f50260e230e 339 Pfam PF01734 Patatin-like phospholipase 1 204 1.2E-18 T 09-03-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NA29_RS00135 eeaea96883cf5ed83e24216b5c2a3be5 206 Pfam PF00005 ABC transporter 34 156 4.8E-13 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS00135 eeaea96883cf5ed83e24216b5c2a3be5 206 Gene3D G3DSA:3.40.50.300 2 193 1.1E-29 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS00135 eeaea96883cf5ed83e24216b5c2a3be5 206 SUPERFAMILY SSF52540 2 192 1.22E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17325 25f739b5562fac1158153682432bf9fb 425 Gene3D G3DSA:2.102.10.10 24 143 5.2E-29 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS17325 25f739b5562fac1158153682432bf9fb 425 SUPERFAMILY SSF55961 130 301 1.79E-36 T 09-03-2017 NA29_RS17325 25f739b5562fac1158153682432bf9fb 425 SUPERFAMILY SSF55961 330 388 1.79E-36 T 09-03-2017 NA29_RS17325 25f739b5562fac1158153682432bf9fb 425 Pfam PF00355 Rieske [2Fe-2S] domain 27 109 8.0E-13 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS17325 25f739b5562fac1158153682432bf9fb 425 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 70 92 - T 09-03-2017 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 NA29_RS17325 25f739b5562fac1158153682432bf9fb 425 SUPERFAMILY SSF50022 19 138 2.49E-29 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS17725 8bf4acb14ce6ff74d322fb2d9e8d7c56 103 Pfam PF05164 Cell division protein ZapA 7 94 1.9E-19 T 09-03-2017 IPR007838 Cell division protein ZapA-like NA29_RS17725 8bf4acb14ce6ff74d322fb2d9e8d7c56 103 SUPERFAMILY SSF102829 6 96 1.7E-18 T 09-03-2017 IPR007838 Cell division protein ZapA-like NA29_RS15930 e46afa654e83c1188a327da925f6c407 193 SUPERFAMILY SSF55961 29 176 7.54E-23 T 09-03-2017 NA29_RS15930 e46afa654e83c1188a327da925f6c407 193 Gene3D G3DSA:3.30.530.20 28 132 3.5E-14 T 09-03-2017 IPR023393 START-like domain NA29_RS15930 e46afa654e83c1188a327da925f6c407 193 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 29 172 4.1E-23 T 09-03-2017 IPR019587 Polyketide cyclase/dehydrase NA29_RS12865 358266e8b8372b4a6e4e86d4120ae1bc 142 SUPERFAMILY SSF103481 45 141 5.62E-16 T 09-03-2017 NA29_RS12865 358266e8b8372b4a6e4e86d4120ae1bc 142 Pfam PF00892 EamA-like transporter family 6 141 4.2E-21 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS07460 cb6967058481e98c3cf0a34ce040ded7 594 SUPERFAMILY SSF52540 4 186 8.54E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07460 cb6967058481e98c3cf0a34ce040ded7 594 Gene3D G3DSA:3.90.1170.30 516 592 1.2E-14 T 09-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS07460 cb6967058481e98c3cf0a34ce040ded7 594 SUPERFAMILY SSF54680 514 592 1.31E-14 T 09-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS07460 cb6967058481e98c3cf0a34ce040ded7 594 Gene3D G3DSA:3.40.50.300 4 29 3.7E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07460 cb6967058481e98c3cf0a34ce040ded7 594 Gene3D G3DSA:3.40.50.300 79 152 3.7E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07460 cb6967058481e98c3cf0a34ce040ded7 594 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 526 591 1.6E-9 T 09-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS07460 cb6967058481e98c3cf0a34ce040ded7 594 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 7 183 2.6E-53 T 09-03-2017 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532 NA29_RS07460 cb6967058481e98c3cf0a34ce040ded7 594 SMART SM00941 525 592 2.1E-17 T 09-03-2017 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS07460 cb6967058481e98c3cf0a34ce040ded7 594 SMART SM00072 3 186 0.0024 T 09-03-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit NA29_RS07460 cb6967058481e98c3cf0a34ce040ded7 594 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 6 183 32.463 T 09-03-2017 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532 NA29_RS07460 cb6967058481e98c3cf0a34ce040ded7 594 Pfam PF00591 Glycosyl transferase family, a/b domain 262 346 4.9E-8 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS07460 cb6967058481e98c3cf0a34ce040ded7 594 Gene3D G3DSA:3.40.1030.10 257 508 3.2E-60 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS07460 cb6967058481e98c3cf0a34ce040ded7 594 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 296 311 - T 09-03-2017 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS07460 cb6967058481e98c3cf0a34ce040ded7 594 SUPERFAMILY SSF52418 256 508 1.83E-54 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS06030 2de3a6360130335d42795bf62f531579 540 Gene3D G3DSA:3.40.250.10 136 249 2.9E-19 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS06030 2de3a6360130335d42795bf62f531579 540 SUPERFAMILY SSF52821 117 246 3.01E-30 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS06030 2de3a6360130335d42795bf62f531579 540 SUPERFAMILY SSF52821 264 361 2.62E-16 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS06030 2de3a6360130335d42795bf62f531579 540 Gene3D G3DSA:3.40.250.10 372 491 8.5E-16 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS06030 2de3a6360130335d42795bf62f531579 540 Gene3D G3DSA:3.40.250.10 270 361 3.0E-11 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS06030 2de3a6360130335d42795bf62f531579 540 Gene3D G3DSA:3.40.250.10 7 116 7.5E-18 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS06030 2de3a6360130335d42795bf62f531579 540 Pfam PF00581 Rhodanese-like domain 141 235 7.5E-9 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS06030 2de3a6360130335d42795bf62f531579 540 Pfam PF00581 Rhodanese-like domain 22 111 6.1E-8 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS06030 2de3a6360130335d42795bf62f531579 540 Pfam PF00581 Rhodanese-like domain 394 481 3.3E-6 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS06030 2de3a6360130335d42795bf62f531579 540 SMART SM00450 277 383 5.5 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS06030 2de3a6360130335d42795bf62f531579 540 SMART SM00450 16 115 1.5E-9 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS06030 2de3a6360130335d42795bf62f531579 540 SMART SM00450 141 239 2.0E-5 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS06030 2de3a6360130335d42795bf62f531579 540 SMART SM00450 390 485 5.5E-5 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS06030 2de3a6360130335d42795bf62f531579 540 SUPERFAMILY SSF52821 19 131 8.77E-23 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS06030 2de3a6360130335d42795bf62f531579 540 SUPERFAMILY SSF52821 384 536 1.7E-27 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS10860 ca0ea371c2cd1f12b36523d922dcf38e 297 Gene3D G3DSA:2.70.70.10 114 254 7.1E-51 T 09-03-2017 NA29_RS10860 ca0ea371c2cd1f12b36523d922dcf38e 297 SUPERFAMILY SSF51261 115 252 1.46E-52 T 09-03-2017 IPR011055 Duplicated hybrid motif NA29_RS10860 ca0ea371c2cd1f12b36523d922dcf38e 297 Pfam PF01551 Peptidase family M23 151 248 4.0E-32 T 09-03-2017 IPR016047 Peptidase M23 NA29_RS14400 5d8b55aaf1b16f5c82bb5e4690295113 209 PIRSF PIRSF006170 1 209 9.6E-61 T 09-03-2017 IPR026039 Uncharacterised protein family UPF0070 NA29_RS14400 5d8b55aaf1b16f5c82bb5e4690295113 209 SUPERFAMILY SSF48452 94 188 6.83E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS14400 5d8b55aaf1b16f5c82bb5e4690295113 209 Pfam PF09976 Tetratricopeptide repeat-like domain 15 208 1.6E-66 T 09-03-2017 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038 NA29_RS00550 581a001ff81c1c114444fc8fe411c796 502 PIRSF PIRSF012702 1 502 7.6E-159 T 09-03-2017 IPR009197 Microcystin LR degradation protein MlrC NA29_RS00550 581a001ff81c1c114444fc8fe411c796 502 Pfam PF07171 MlrC C-terminus 305 486 7.8E-53 T 09-03-2017 IPR010799 Microcystin LR degradation protein MlrC, C-terminal NA29_RS00550 581a001ff81c1c114444fc8fe411c796 502 Pfam PF07364 Metallopeptidase family M81 2 292 1.0E-94 T 09-03-2017 IPR015995 Microcystin LR degradation protein MlrC, N-terminal NA29_RS15895 d097fa7aa06bf027fb4f76fd162075e6 214 SUPERFAMILY SSF50475 12 194 9.28E-37 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS15895 d097fa7aa06bf027fb4f76fd162075e6 214 PIRSF PIRSF010372 1 210 1.9E-64 T 09-03-2017 IPR007396 Transcriptional regulator PAI 2-type NA29_RS15895 d097fa7aa06bf027fb4f76fd162075e6 214 Pfam PF04299 Putative FMN-binding domain 1 168 3.6E-61 T 09-03-2017 IPR007396 Transcriptional regulator PAI 2-type NA29_RS15895 d097fa7aa06bf027fb4f76fd162075e6 214 Gene3D G3DSA:2.30.110.10 1 208 2.6E-74 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS10690 305995cb0d43353e99b058cdc291de4e 338 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 5 336 3.1E-103 T 09-03-2017 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 NA29_RS10690 305995cb0d43353e99b058cdc291de4e 338 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 338 118.337 T 09-03-2017 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 NA29_RS10690 305995cb0d43353e99b058cdc291de4e 338 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 337 7.8E-53 T 09-03-2017 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 NA29_RS10690 305995cb0d43353e99b058cdc291de4e 338 Gene3D G3DSA:3.40.630.10 57 246 2.4E-14 T 09-03-2017 NA29_RS10690 305995cb0d43353e99b058cdc291de4e 338 SUPERFAMILY SSF53187 52 337 2.81E-68 T 09-03-2017 NA29_RS16795 40e2824f6056d82e662d6f8ceacca354 339 SUPERFAMILY SSF51569 2 275 4.4E-65 T 09-03-2017 NA29_RS16795 40e2824f6056d82e662d6f8ceacca354 339 Pfam PF00682 HMGL-like 6 264 7.5E-74 T 09-03-2017 IPR000891 Pyruvate carboxyltransferase GO:0003824 NA29_RS16795 40e2824f6056d82e662d6f8ceacca354 339 SUPERFAMILY SSF89000 288 337 7.06E-18 T 09-03-2017 NA29_RS16795 40e2824f6056d82e662d6f8ceacca354 339 Pfam PF07836 DmpG-like communication domain 274 334 1.7E-29 T 09-03-2017 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 NA29_RS16795 40e2824f6056d82e662d6f8ceacca354 339 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 339 222.589 T 09-03-2017 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 NA29_RS16795 40e2824f6056d82e662d6f8ceacca354 339 Gene3D G3DSA:1.10.8.60 275 337 1.7E-32 T 09-03-2017 NA29_RS16795 40e2824f6056d82e662d6f8ceacca354 339 Gene3D G3DSA:3.20.20.70 2 264 4.0E-55 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS16795 40e2824f6056d82e662d6f8ceacca354 339 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 273 333 2.0E-24 T 09-03-2017 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 NA29_RS16795 40e2824f6056d82e662d6f8ceacca354 339 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 4 336 2.2E-178 T 09-03-2017 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 NA29_RS21920 9751010aedc7ffd62c77d30d7c22636d 231 Pfam PF04752 ChaC-like protein 62 226 1.6E-37 T 09-03-2017 IPR006840 ChaC-like protein Reactome: R-HSA-174403 NA29_RS21920 9751010aedc7ffd62c77d30d7c22636d 231 SUPERFAMILY SSF110857 62 174 2.35E-8 T 09-03-2017 IPR013024 Butirosin biosynthesis, BtrG-like NA29_RS21920 9751010aedc7ffd62c77d30d7c22636d 231 Gene3D G3DSA:3.10.490.10 60 222 6.8E-24 T 09-03-2017 IPR013024 Butirosin biosynthesis, BtrG-like NA29_RS09430 2a6c859ef7a73040e1b9327f18ec8e2f 72 Pfam PF13275 S4 domain 6 69 6.4E-24 T 09-03-2017 NA29_RS09430 2a6c859ef7a73040e1b9327f18ec8e2f 72 Gene3D G3DSA:3.10.290.10 1 69 9.5E-26 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 NA29_RS09430 2a6c859ef7a73040e1b9327f18ec8e2f 72 SUPERFAMILY SSF55174 4 70 4.97E-20 T 09-03-2017 NA29_RS23860 8fc3f88745961e723125901fa3fa1a58 104 SUPERFAMILY SSF54189 8 97 8.63E-30 T 09-03-2017 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23860 8fc3f88745961e723125901fa3fa1a58 104 Pfam PF00276 Ribosomal protein L23 13 99 3.5E-30 T 09-03-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 NA29_RS23860 8fc3f88745961e723125901fa3fa1a58 104 Gene3D G3DSA:3.30.70.330 10 101 1.2E-33 T 09-03-2017 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 NA29_RS23860 8fc3f88745961e723125901fa3fa1a58 104 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 12 102 21.694 T 09-03-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 NA29_RS25065 63377fd16056387e6345ba13ecd7f6b5 138 SUPERFAMILY SSF51344 3 85 4.58E-25 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS25065 63377fd16056387e6345ba13ecd7f6b5 138 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 1.5E-30 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS25065 63377fd16056387e6345ba13ecd7f6b5 138 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 132 8.7E-44 T 09-03-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS25065 63377fd16056387e6345ba13ecd7f6b5 138 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 21.508 T 09-03-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS25065 63377fd16056387e6345ba13ecd7f6b5 138 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 132 1.9E-11 T 09-03-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 NA29_RS25065 63377fd16056387e6345ba13ecd7f6b5 138 Gene3D G3DSA:1.20.5.440 90 133 1.2E-17 T 09-03-2017 NA29_RS25065 63377fd16056387e6345ba13ecd7f6b5 138 Gene3D G3DSA:2.60.15.10 1 89 2.9E-31 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS25065 63377fd16056387e6345ba13ecd7f6b5 138 SUPERFAMILY SSF46604 87 135 8.37E-14 T 09-03-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 NA29_RS25065 63377fd16056387e6345ba13ecd7f6b5 138 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 1.0E-36 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 NA29_RS10800 d5e04dc07370f7576a1bbe12b5a7cbbc 395 Pfam PF07690 Major Facilitator Superfamily 20 349 4.7E-40 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS10800 d5e04dc07370f7576a1bbe12b5a7cbbc 395 Gene3D G3DSA:1.20.1250.20 11 193 2.6E-34 T 09-03-2017 NA29_RS10800 d5e04dc07370f7576a1bbe12b5a7cbbc 395 Gene3D G3DSA:1.20.1250.20 211 392 5.6E-21 T 09-03-2017 NA29_RS10800 d5e04dc07370f7576a1bbe12b5a7cbbc 395 SUPERFAMILY SSF103473 7 395 5.1E-74 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS10800 d5e04dc07370f7576a1bbe12b5a7cbbc 395 ProSitePatterns PS00217 Sugar transport proteins signature 2. 106 131 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS19915 ae660a9c2478079a92ef77e6a7ea588a 480 Gene3D G3DSA:2.30.30.60 278 326 4.7E-12 T 09-03-2017 NA29_RS19915 ae660a9c2478079a92ef77e6a7ea588a 480 SUPERFAMILY SSF82689 332 430 2.88E-26 T 09-03-2017 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 NA29_RS19915 ae660a9c2478079a92ef77e6a7ea588a 480 Pfam PF00924 Mechanosensitive ion channel 220 419 2.0E-47 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 NA29_RS19915 ae660a9c2478079a92ef77e6a7ea588a 480 SUPERFAMILY SSF82861 176 260 2.35E-9 T 09-03-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 NA29_RS19915 ae660a9c2478079a92ef77e6a7ea588a 480 Gene3D G3DSA:3.30.70.100 334 417 2.5E-18 T 09-03-2017 NA29_RS19915 ae660a9c2478079a92ef77e6a7ea588a 480 SUPERFAMILY SSF50182 262 327 1.8E-14 T 09-03-2017 IPR010920 LSM domain NA29_RS03470 0f376457fd26991ff34862436c88805a 137 Gene3D G3DSA:3.30.1330.40 4 135 5.5E-39 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS03470 0f376457fd26991ff34862436c88805a 137 Pfam PF01042 Endoribonuclease L-PSP 25 133 1.8E-21 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family NA29_RS03470 0f376457fd26991ff34862436c88805a 137 SUPERFAMILY SSF55298 23 135 2.04E-29 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS11865 d661f5bdb32d944990e92690f42886ca 458 SUPERFAMILY SSF53720 3 453 5.63E-135 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS11865 d661f5bdb32d944990e92690f42886ca 458 Pfam PF00171 Aldehyde dehydrogenase family 3 451 9.6E-127 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS11865 d661f5bdb32d944990e92690f42886ca 458 Gene3D G3DSA:3.40.309.10 242 427 2.0E-61 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS11865 d661f5bdb32d944990e92690f42886ca 458 Gene3D G3DSA:3.40.605.10 3 241 5.6E-65 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS02485 3e042b5118557a456c75825118c8e781 344 Gene3D G3DSA:3.40.50.720 157 298 4.5E-19 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS02485 3e042b5118557a456c75825118c8e781 344 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 27 327 1.2E-33 T 09-03-2017 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 NA29_RS02485 3e042b5118557a456c75825118c8e781 344 TIGRFAM TIGR03944 dehyd_SbnB_fam: 2,3-diaminopropionate biosynthesis protein SbnB 10 331 4.3E-115 T 09-03-2017 IPR023866 2,3-diaminopropionate biosynthesis protein SbnB NA29_RS02485 3e042b5118557a456c75825118c8e781 344 PIRSF PIRSF001439 4 333 2.9E-61 T 09-03-2017 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 NA29_RS02485 3e042b5118557a456c75825118c8e781 344 SUPERFAMILY SSF51735 9 329 2.67E-60 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS02485 3e042b5118557a456c75825118c8e781 344 Gene3D G3DSA:3.30.1780.10 8 156 3.0E-38 T 09-03-2017 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 NA29_RS22120 f192646159c6ff11ec657485fe654a94 245 PIRSF PIRSF015601 1 245 7.3E-54 T 09-03-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS22120 f192646159c6ff11ec657485fe654a94 245 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 14 241 2.1E-51 T 09-03-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS22120 f192646159c6ff11ec657485fe654a94 245 SUPERFAMILY SSF75217 71 245 1.78E-47 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases NA29_RS22120 f192646159c6ff11ec657485fe654a94 245 SUPERFAMILY SSF88697 1 66 1.82E-14 T 09-03-2017 IPR015947 PUA-like domain NA29_RS22120 f192646159c6ff11ec657485fe654a94 245 Gene3D G3DSA:3.40.1280.10 72 245 7.3E-57 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NA29_RS22120 f192646159c6ff11ec657485fe654a94 245 Pfam PF04452 RNA methyltransferase 18 239 8.6E-65 T 09-03-2017 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS22120 f192646159c6ff11ec657485fe654a94 245 Gene3D G3DSA:2.40.240.20 1 68 9.9E-23 T 09-03-2017 NA29_RS02030 1d293cbb72daf8860ca83684368c1f8a 201 SUPERFAMILY SSF52833 3 197 6.31E-39 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS02030 1d293cbb72daf8860ca83684368c1f8a 201 Pfam PF01323 DSBA-like thioredoxin domain 5 194 1.9E-33 T 09-03-2017 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 NA29_RS02030 1d293cbb72daf8860ca83684368c1f8a 201 PIRSF PIRSF006386 1 201 9.8E-52 T 09-03-2017 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590 NA29_RS02030 1d293cbb72daf8860ca83684368c1f8a 201 Gene3D G3DSA:3.40.30.10 2 197 2.8E-51 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS00325 d114c327702a3082a772034cbbce68a4 105 Pfam PF13663 Domain of unknown function (DUF4148) 1 67 6.8E-11 T 09-03-2017 IPR025421 Protein of unknown function DUF4148 NA29_RS21165 356a2738654cba530a85765981f4bc19 218 Pfam PF01810 LysE type translocator 14 214 7.9E-30 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS21165 356a2738654cba530a85765981f4bc19 218 PIRSF PIRSF006324 1 218 3.2E-47 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS00490 fc6f03796dc7fd5c87a37073dec31c18 512 SUPERFAMILY SSF48452 386 480 1.86E-12 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS00490 fc6f03796dc7fd5c87a37073dec31c18 512 Gene3D G3DSA:3.40.50.150 75 266 5.8E-47 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS00490 fc6f03796dc7fd5c87a37073dec31c18 512 Gene3D G3DSA:1.25.40.10 381 483 3.4E-14 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS00490 fc6f03796dc7fd5c87a37073dec31c18 512 SMART SM00028 421 454 0.06 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS00490 fc6f03796dc7fd5c87a37073dec31c18 512 SMART SM00028 455 488 430.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS00490 fc6f03796dc7fd5c87a37073dec31c18 512 SMART SM00028 387 420 45.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 NA29_RS00490 fc6f03796dc7fd5c87a37073dec31c18 512 SUPERFAMILY SSF53335 75 259 8.35E-39 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS00490 fc6f03796dc7fd5c87a37073dec31c18 512 SMART SM00138 1 275 6.0E-27 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS00490 fc6f03796dc7fd5c87a37073dec31c18 512 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 255 1.3E-35 T 09-03-2017 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal NA29_RS00490 fc6f03796dc7fd5c87a37073dec31c18 512 PRINTS PR00996 Glutamate methyltransferase family signature 68 80 1.4E-19 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS00490 fc6f03796dc7fd5c87a37073dec31c18 512 PRINTS PR00996 Glutamate methyltransferase family signature 111 131 1.4E-19 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS00490 fc6f03796dc7fd5c87a37073dec31c18 512 PRINTS PR00996 Glutamate methyltransferase family signature 234 257 1.4E-19 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS00490 fc6f03796dc7fd5c87a37073dec31c18 512 PRINTS PR00996 Glutamate methyltransferase family signature 215 229 1.4E-19 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS00490 fc6f03796dc7fd5c87a37073dec31c18 512 PRINTS PR00996 Glutamate methyltransferase family signature 144 160 1.4E-19 T 09-03-2017 IPR000780 MCP methyltransferase, CheR-type GO:0008757 NA29_RS20100 1460f8a0cc1c93b0f85c890b4c1b3fd8 270 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 17 262 4.6E-86 T 09-03-2017 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 NA29_RS20100 1460f8a0cc1c93b0f85c890b4c1b3fd8 270 Gene3D G3DSA:3.90.550.10 17 269 2.5E-80 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS20100 1460f8a0cc1c93b0f85c890b4c1b3fd8 270 Pfam PF02348 Cytidylyltransferase 18 242 6.4E-55 T 09-03-2017 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 NA29_RS20100 1460f8a0cc1c93b0f85c890b4c1b3fd8 270 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 15 269 42.547 T 09-03-2017 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 NA29_RS20100 1460f8a0cc1c93b0f85c890b4c1b3fd8 270 SUPERFAMILY SSF53448 17 268 1.55E-60 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS09195 b242bd1b8d46a1f950b58f3636d4902e 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 14 423 8.2E-76 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 NA29_RS09195 b242bd1b8d46a1f950b58f3636d4902e 459 PIRSF PIRSF006603 5 452 3.2E-55 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 NA29_RS09195 b242bd1b8d46a1f950b58f3636d4902e 459 Pfam PF01554 MatE 242 402 2.0E-24 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 NA29_RS09195 b242bd1b8d46a1f950b58f3636d4902e 459 Pfam PF01554 MatE 14 171 3.0E-24 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 NA29_RS11930 64c10b6146a3fc9eae80e0ed1423591d 100 SMART SM00418 5 94 2.1E-11 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS11930 64c10b6146a3fc9eae80e0ed1423591d 100 SUPERFAMILY SSF46785 2 95 4.71E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11930 64c10b6146a3fc9eae80e0ed1423591d 100 Gene3D G3DSA:1.10.10.10 2 97 9.7E-30 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11930 64c10b6146a3fc9eae80e0ed1423591d 100 Pfam PF12840 Helix-turn-helix domain 5 78 2.0E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07205 5a4a393ee69e01997acad428f0badeee 157 Gene3D G3DSA:3.10.129.10 3 146 4.2E-39 T 09-03-2017 IPR029069 HotDog domain NA29_RS07205 5a4a393ee69e01997acad428f0badeee 157 SUPERFAMILY SSF54637 9 145 9.61E-34 T 09-03-2017 IPR029069 HotDog domain NA29_RS07205 5a4a393ee69e01997acad428f0badeee 157 Pfam PF03061 Thioesterase superfamily 27 104 2.9E-8 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 NA29_RS00535 688a2697202232fb413e78189dc36dad 396 Pfam PF01546 Peptidase family M20/M25/M40 78 388 1.0E-37 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NA29_RS00535 688a2697202232fb413e78189dc36dad 396 SUPERFAMILY SSF53187 305 393 1.0E-88 T 09-03-2017 NA29_RS00535 688a2697202232fb413e78189dc36dad 396 SUPERFAMILY SSF53187 13 204 1.0E-88 T 09-03-2017 NA29_RS00535 688a2697202232fb413e78189dc36dad 396 Gene3D G3DSA:3.40.630.10 12 185 6.1E-102 T 09-03-2017 NA29_RS00535 688a2697202232fb413e78189dc36dad 396 Gene3D G3DSA:3.40.630.10 305 394 6.1E-102 T 09-03-2017 NA29_RS00535 688a2697202232fb413e78189dc36dad 396 PIRSF PIRSF005962 7 395 5.6E-129 T 09-03-2017 IPR017439 Amidohydrolase GO:0016787 NA29_RS00535 688a2697202232fb413e78189dc36dad 396 Gene3D G3DSA:3.30.70.360 188 304 4.9E-41 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS00535 688a2697202232fb413e78189dc36dad 396 SUPERFAMILY SSF55031 190 303 1.57E-31 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS00535 688a2697202232fb413e78189dc36dad 396 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 20 379 2.8E-113 T 09-03-2017 IPR017439 Amidohydrolase GO:0016787 NA29_RS00535 688a2697202232fb413e78189dc36dad 396 Pfam PF07687 Peptidase dimerisation domain 192 287 1.1E-9 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS08375 79da4bab57366d8614cc7702be3e3bd4 180 Gene3D G3DSA:1.20.950.20 3 75 1.9E-6 T 09-03-2017 NA29_RS08375 79da4bab57366d8614cc7702be3e3bd4 180 Pfam PF01292 Prokaryotic cytochrome b561 7 177 1.2E-29 T 09-03-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 NA29_RS08375 79da4bab57366d8614cc7702be3e3bd4 180 SUPERFAMILY SSF81342 5 179 5.89E-35 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 NA29_RS17340 17b588061746949863f3b33adda2dfa9 377 Gene3D G3DSA:3.30.1220.10 265 371 4.4E-19 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS17340 17b588061746949863f3b33adda2dfa9 377 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 275 371 6.0E-15 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS17340 17b588061746949863f3b33adda2dfa9 377 Gene3D G3DSA:3.40.50.300 10 210 1.2E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17340 17b588061746949863f3b33adda2dfa9 377 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 191 1.2E-42 T 09-03-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain NA29_RS17340 17b588061746949863f3b33adda2dfa9 377 SUPERFAMILY SSF90002 274 371 1.05E-14 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS17340 17b588061746949863f3b33adda2dfa9 377 SMART SM00833 273 373 9.1E-14 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS17340 17b588061746949863f3b33adda2dfa9 377 SUPERFAMILY SSF52540 10 218 1.52E-32 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14145 fe237ed279d767ba50ca59ce6fab5dd1 517 Pfam PF00743 Flavin-binding monooxygenase-like 91 239 5.1E-11 T 09-03-2017 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 NA29_RS14145 fe237ed279d767ba50ca59ce6fab5dd1 517 Gene3D G3DSA:3.50.50.60 343 491 5.1E-9 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS14145 fe237ed279d767ba50ca59ce6fab5dd1 517 Gene3D G3DSA:3.50.50.60 13 236 1.1E-54 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS14145 fe237ed279d767ba50ca59ce6fab5dd1 517 Pfam PF13450 NAD(P)-binding Rossmann-like domain 24 74 1.1E-8 T 09-03-2017 NA29_RS14145 fe237ed279d767ba50ca59ce6fab5dd1 517 PRINTS PR00757 Flavin-containing amine oxidase signature 21 40 1.4E-6 T 09-03-2017 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 NA29_RS14145 fe237ed279d767ba50ca59ce6fab5dd1 517 PRINTS PR00757 Flavin-containing amine oxidase signature 438 460 1.4E-6 T 09-03-2017 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 NA29_RS14145 fe237ed279d767ba50ca59ce6fab5dd1 517 SUPERFAMILY SSF51905 18 403 6.48E-55 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03970 ce589b4594b9ff19dbe948263ed9a239 272 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS03970 ce589b4594b9ff19dbe948263ed9a239 272 SUPERFAMILY SSF52540 5 226 5.77E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03970 ce589b4594b9ff19dbe948263ed9a239 272 Pfam PF00005 ABC transporter 26 165 2.1E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS03970 ce589b4594b9ff19dbe948263ed9a239 272 SMART SM00382 34 215 6.1E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS03970 ce589b4594b9ff19dbe948263ed9a239 272 Gene3D G3DSA:3.40.50.300 4 218 1.4E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS07735 66bc95c6736fe3bc3702d9261c8f0e71 338 Gene3D G3DSA:3.40.50.2000 235 277 6.6E-6 T 09-03-2017 NA29_RS07735 66bc95c6736fe3bc3702d9261c8f0e71 338 SUPERFAMILY SSF53756 108 276 3.45E-8 T 09-03-2017 NA29_RS18165 8259f1f9c07d356069cbfb3372ecf208 435 SUPERFAMILY SSF50022 19 140 1.44E-28 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS18165 8259f1f9c07d356069cbfb3372ecf208 435 Gene3D G3DSA:2.102.10.10 24 147 4.3E-29 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS18165 8259f1f9c07d356069cbfb3372ecf208 435 Pfam PF00355 Rieske [2Fe-2S] domain 27 106 1.3E-14 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS18165 8259f1f9c07d356069cbfb3372ecf208 435 SUPERFAMILY SSF55961 130 353 4.85E-29 T 09-03-2017 NA29_RS02285 1dddac371f0b76d10ea7ed6ba6fcd000 346 Gene3D G3DSA:3.40.190.10 182 258 1.7E-15 T 09-03-2017 NA29_RS02285 1dddac371f0b76d10ea7ed6ba6fcd000 346 SUPERFAMILY SSF46785 5 88 1.05E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS02285 1dddac371f0b76d10ea7ed6ba6fcd000 346 SUPERFAMILY SSF53850 95 294 3.62E-35 T 09-03-2017 NA29_RS02285 1dddac371f0b76d10ea7ed6ba6fcd000 346 Gene3D G3DSA:1.10.10.10 4 89 1.7E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS02285 1dddac371f0b76d10ea7ed6ba6fcd000 346 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 3.5E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS02285 1dddac371f0b76d10ea7ed6ba6fcd000 346 Gene3D G3DSA:3.40.190.10 97 181 6.5E-29 T 09-03-2017 NA29_RS02285 1dddac371f0b76d10ea7ed6ba6fcd000 346 Pfam PF03466 LysR substrate binding domain 94 292 8.5E-33 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS02285 1dddac371f0b76d10ea7ed6ba6fcd000 346 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 9.1E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS02285 1dddac371f0b76d10ea7ed6ba6fcd000 346 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 9.1E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS02285 1dddac371f0b76d10ea7ed6ba6fcd000 346 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 9.1E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS23780 42b9c64ce365806aab435c0ae69573c4 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 6 59 6.6E-25 T 09-03-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 NA29_RS23780 42b9c64ce365806aab435c0ae69573c4 60 Gene3D G3DSA:3.30.1390.20 4 60 2.1E-29 T 09-03-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain NA29_RS23780 42b9c64ce365806aab435c0ae69573c4 60 Pfam PF00327 Ribosomal protein L30p/L7e 7 56 2.6E-18 T 09-03-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain NA29_RS23780 42b9c64ce365806aab435c0ae69573c4 60 SUPERFAMILY SSF55129 4 58 1.09E-19 T 09-03-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain NA29_RS23780 42b9c64ce365806aab435c0ae69573c4 60 PIRSF PIRSF002211 1 60 2.1E-26 T 09-03-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 NA29_RS23780 42b9c64ce365806aab435c0ae69573c4 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 3 60 20.263 T 09-03-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 NA29_RS16425 a3ce8ea9d8837fc1c51ee72205c86b1d 376 SMART SM01003 4 136 1.5E-63 T 09-03-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal NA29_RS16425 a3ce8ea9d8837fc1c51ee72205c86b1d 376 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 09-03-2017 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 NA29_RS16425 a3ce8ea9d8837fc1c51ee72205c86b1d 376 SUPERFAMILY SSF52283 1 167 2.98E-49 T 09-03-2017 NA29_RS16425 a3ce8ea9d8837fc1c51ee72205c86b1d 376 Gene3D G3DSA:3.40.50.1770 1 167 1.4E-54 T 09-03-2017 NA29_RS16425 a3ce8ea9d8837fc1c51ee72205c86b1d 376 SMART SM01002 145 318 4.5E-78 T 09-03-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain NA29_RS16425 a3ce8ea9d8837fc1c51ee72205c86b1d 376 Gene3D G3DSA:3.40.50.1770 200 373 9.9E-38 T 09-03-2017 NA29_RS16425 a3ce8ea9d8837fc1c51ee72205c86b1d 376 Gene3D G3DSA:3.40.50.720 168 199 1.3E-4 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16425 a3ce8ea9d8837fc1c51ee72205c86b1d 376 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 1.7E-40 T 09-03-2017 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal NA29_RS16425 a3ce8ea9d8837fc1c51ee72205c86b1d 376 SUPERFAMILY SSF51735 136 322 3.62E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16425 a3ce8ea9d8837fc1c51ee72205c86b1d 376 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 374 1.8E-68 T 09-03-2017 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain NA29_RS00700 d148b40c95b76b8d0058b31d7095c611 129 SUPERFAMILY SSF52833 20 95 6.29E-15 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS00700 d148b40c95b76b8d0058b31d7095c611 129 Gene3D G3DSA:3.40.30.10 21 81 1.1E-13 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS00700 d148b40c95b76b8d0058b31d7095c611 129 Pfam PF00085 Thioredoxin 20 85 6.2E-10 T 09-03-2017 IPR013766 Thioredoxin domain GO:0045454 NA29_RS24335 1a6ec581d632603f392794520bb115d9 1224 Pfam PF02538 Hydantoinase B/oxoprolinase 709 1223 2.0E-201 T 09-03-2017 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 NA29_RS24335 1a6ec581d632603f392794520bb115d9 1224 Pfam PF01968 Hydantoinase/oxoprolinase 222 509 6.1E-111 T 09-03-2017 IPR002821 Hydantoinase/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 NA29_RS24335 1a6ec581d632603f392794520bb115d9 1224 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 24 202 3.1E-59 T 09-03-2017 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 NA29_RS04760 07af06e9ce1d09aa07168e08c8a38051 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 132 148 7.3E-56 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS04760 07af06e9ce1d09aa07168e08c8a38051 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 7.3E-56 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS04760 07af06e9ce1d09aa07168e08c8a38051 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 169 7.3E-56 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS04760 07af06e9ce1d09aa07168e08c8a38051 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 232 246 7.3E-56 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS04760 07af06e9ce1d09aa07168e08c8a38051 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 181 198 7.3E-56 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS04760 07af06e9ce1d09aa07168e08c8a38051 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 7.3E-56 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS04760 07af06e9ce1d09aa07168e08c8a38051 692 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 14 686 1.8E-253 T 09-03-2017 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 NA29_RS04760 07af06e9ce1d09aa07168e08c8a38051 692 PIRSF PIRSF005419 2 691 4.2E-223 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS04760 07af06e9ce1d09aa07168e08c8a38051 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 137 160 - T 09-03-2017 IPR025505 FHIPEP conserved site NA29_RS04760 07af06e9ce1d09aa07168e08c8a38051 692 Pfam PF00771 FHIPEP family 27 677 6.5E-216 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS11870 e0274768f2ec5ac4c4fc2d97d4560b36 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 4.1E-12 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11870 e0274768f2ec5ac4c4fc2d97d4560b36 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.1E-12 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11870 e0274768f2ec5ac4c4fc2d97d4560b36 306 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 4.1E-12 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11870 e0274768f2ec5ac4c4fc2d97d4560b36 306 Pfam PF00106 short chain dehydrogenase 7 198 7.4E-35 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11870 e0274768f2ec5ac4c4fc2d97d4560b36 306 Gene3D G3DSA:3.40.50.720 7 257 1.2E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS11870 e0274768f2ec5ac4c4fc2d97d4560b36 306 SUPERFAMILY SSF51735 7 230 3.4E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17865 37a5f2ffd2defc6116b5e03f6b4dff15 262 Gene3D G3DSA:1.10.620.20 17 172 3.5E-9 T 09-03-2017 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 NA29_RS17865 37a5f2ffd2defc6116b5e03f6b4dff15 262 SUPERFAMILY SSF47240 13 193 1.86E-20 T 09-03-2017 IPR009078 Ferritin-like superfamily NA29_RS10940 df77f2c8590eaced94288dbf1db89d5c 238 Pfam PF01925 Sulfite exporter TauE/SafE 5 232 6.8E-29 T 09-03-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 NA29_RS04140 750250d1487223073affc8e98011a17e 192 SUPERFAMILY SSF82153 47 192 6.02E-41 T 09-03-2017 IPR000782 FAS1 domain NA29_RS04140 750250d1487223073affc8e98011a17e 192 Gene3D G3DSA:2.30.180.10 46 192 4.4E-37 T 09-03-2017 IPR000782 FAS1 domain NA29_RS04140 750250d1487223073affc8e98011a17e 192 Pfam PF02469 Fasciclin domain 58 192 1.4E-30 T 09-03-2017 IPR000782 FAS1 domain NA29_RS04140 750250d1487223073affc8e98011a17e 192 SMART SM00554 82 192 3.5E-23 T 09-03-2017 IPR000782 FAS1 domain NA29_RS08805 911f0918c3407e4350d4edde1596ead9 170 Gene3D G3DSA:3.10.450.50 19 165 2.3E-26 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS08805 911f0918c3407e4350d4edde1596ead9 170 SUPERFAMILY SSF54427 17 169 1.78E-39 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS08805 911f0918c3407e4350d4edde1596ead9 170 Pfam PF00866 Ring hydroxylating beta subunit 33 162 4.6E-11 T 09-03-2017 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 NA29_RS10745 f9901e27b1cf4dc02c0027e68c661e25 216 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 7 192 4.4E-25 T 09-03-2017 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 NA29_RS10745 f9901e27b1cf4dc02c0027e68c661e25 216 SUPERFAMILY SSF56784 7 201 1.19E-23 T 09-03-2017 IPR023214 HAD-like domain NA29_RS10745 f9901e27b1cf4dc02c0027e68c661e25 216 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 8 199 1.8E-35 T 09-03-2017 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial NA29_RS10745 f9901e27b1cf4dc02c0027e68c661e25 216 Pfam PF12710 haloacid dehalogenase-like hydrolase 8 190 1.0E-38 T 09-03-2017 NA29_RS10745 f9901e27b1cf4dc02c0027e68c661e25 216 Gene3D G3DSA:3.40.50.1000 76 196 5.8E-27 T 09-03-2017 IPR023214 HAD-like domain NA29_RS11675 a39621b9e56abf5de78472270a26c09c 340 Pfam PF13411 MerR HTH family regulatory protein 10 74 4.7E-14 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS11675 a39621b9e56abf5de78472270a26c09c 340 Gene3D G3DSA:1.10.1660.10 11 118 4.0E-23 T 09-03-2017 NA29_RS11675 a39621b9e56abf5de78472270a26c09c 340 SMART SM00422 8 76 4.5E-16 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS11675 a39621b9e56abf5de78472270a26c09c 340 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 NA29_RS11675 a39621b9e56abf5de78472270a26c09c 340 Gene3D G3DSA:3.40.50.300 157 216 3.9E-4 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11675 a39621b9e56abf5de78472270a26c09c 340 SUPERFAMILY SSF46955 9 114 2.12E-20 T 09-03-2017 IPR009061 Putative DNA-binding domain NA29_RS07840 df0d07d6e551d31f7bec61beebac9309 417 Gene3D G3DSA:1.20.1250.20 236 406 4.1E-6 T 09-03-2017 NA29_RS07840 df0d07d6e551d31f7bec61beebac9309 417 Gene3D G3DSA:1.20.1250.20 31 199 3.2E-6 T 09-03-2017 NA29_RS07840 df0d07d6e551d31f7bec61beebac9309 417 SUPERFAMILY SSF103473 18 412 4.05E-26 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS07840 df0d07d6e551d31f7bec61beebac9309 417 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 34 403 4.0E-90 T 09-03-2017 IPR010645 Uncharacterised MFS-type transporter YbfB NA29_RS12975 d93f2f93f42d8bf89e92e27bcd649269 310 PIRSF PIRSF028757 1 304 8.5E-74 T 09-03-2017 IPR003507 Peptidase family S66 NA29_RS12975 d93f2f93f42d8bf89e92e27bcd649269 310 Gene3D G3DSA:3.40.50.10740 3 162 1.5E-37 T 09-03-2017 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain NA29_RS12975 d93f2f93f42d8bf89e92e27bcd649269 310 Pfam PF02016 LD-carboxypeptidase 7 291 2.3E-69 T 09-03-2017 IPR003507 Peptidase family S66 NA29_RS12975 d93f2f93f42d8bf89e92e27bcd649269 310 SUPERFAMILY SSF52317 4 163 2.88E-31 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS12975 d93f2f93f42d8bf89e92e27bcd649269 310 SUPERFAMILY SSF141986 143 295 6.54E-41 T 09-03-2017 IPR027461 LD-carboxypeptidase A, C-terminal domain NA29_RS12975 d93f2f93f42d8bf89e92e27bcd649269 310 Gene3D G3DSA:3.50.30.60 173 298 4.9E-43 T 09-03-2017 IPR027461 LD-carboxypeptidase A, C-terminal domain NA29_RS08800 9bfbb9fbee62c0715b441152cd2a8341 430 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 99 122 - T 09-03-2017 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 NA29_RS08800 9bfbb9fbee62c0715b441152cd2a8341 430 SUPERFAMILY SSF50022 22 174 9.04E-45 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS08800 9bfbb9fbee62c0715b441152cd2a8341 430 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 71 86 5.7E-26 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 NA29_RS08800 9bfbb9fbee62c0715b441152cd2a8341 430 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 113 133 5.7E-26 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 NA29_RS08800 9bfbb9fbee62c0715b441152cd2a8341 430 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 200 222 5.7E-26 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 NA29_RS08800 9bfbb9fbee62c0715b441152cd2a8341 430 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 161 187 5.7E-26 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 NA29_RS08800 9bfbb9fbee62c0715b441152cd2a8341 430 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 92 112 5.7E-26 T 09-03-2017 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 NA29_RS08800 9bfbb9fbee62c0715b441152cd2a8341 430 SUPERFAMILY SSF55961 178 430 1.26E-42 T 09-03-2017 NA29_RS08800 9bfbb9fbee62c0715b441152cd2a8341 430 Gene3D G3DSA:2.102.10.10 57 167 2.4E-23 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS08800 9bfbb9fbee62c0715b441152cd2a8341 430 Gene3D G3DSA:3.90.380.10 168 429 3.3E-51 T 09-03-2017 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 NA29_RS08800 9bfbb9fbee62c0715b441152cd2a8341 430 Pfam PF00355 Rieske [2Fe-2S] domain 56 143 2.5E-20 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS08800 9bfbb9fbee62c0715b441152cd2a8341 430 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 211 428 5.0E-16 T 09-03-2017 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 NA29_RS18720 5254aaac7e977ecdf2a7f1299ec13b42 426 SUPERFAMILY SSF48452 28 135 9.21E-5 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS18720 5254aaac7e977ecdf2a7f1299ec13b42 426 Gene3D G3DSA:1.10.10.10 354 392 9.5E-5 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18720 5254aaac7e977ecdf2a7f1299ec13b42 426 SUPERFAMILY SSF46785 351 418 3.11E-5 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS00825 d9a6db8b267fd2c1189e4382ac6966a2 381 PRINTS PR01344 Salmonella/Shigella invasion protein E (InvE) signature 51 71 2.8E-8 T 09-03-2017 IPR003520 Salmonella/Shigella invasion protein E GO:0009306 NA29_RS00825 d9a6db8b267fd2c1189e4382ac6966a2 381 PRINTS PR01344 Salmonella/Shigella invasion protein E (InvE) signature 109 128 2.8E-8 T 09-03-2017 IPR003520 Salmonella/Shigella invasion protein E GO:0009306 NA29_RS00825 d9a6db8b267fd2c1189e4382ac6966a2 381 PRINTS PR01344 Salmonella/Shigella invasion protein E (InvE) signature 209 221 2.8E-8 T 09-03-2017 IPR003520 Salmonella/Shigella invasion protein E GO:0009306 NA29_RS00825 d9a6db8b267fd2c1189e4382ac6966a2 381 PRINTS PR01344 Salmonella/Shigella invasion protein E (InvE) signature 265 282 2.8E-8 T 09-03-2017 IPR003520 Salmonella/Shigella invasion protein E GO:0009306 NA29_RS00825 d9a6db8b267fd2c1189e4382ac6966a2 381 Pfam PF07201 HrpJ-like domain 53 216 1.4E-17 T 09-03-2017 IPR010812 Hypersensitivity response secretion-like, HrpJ GO:0009405|GO:0019867|GO:0046903 NA29_RS00825 d9a6db8b267fd2c1189e4382ac6966a2 381 SUPERFAMILY SSF140591 80 247 1.96E-23 T 09-03-2017 NA29_RS12630 a84c4b0a511a6a2f6c6f7eeeb33c5546 514 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 493 1.6E-124 T 09-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 NA29_RS12630 a84c4b0a511a6a2f6c6f7eeeb33c5546 514 SUPERFAMILY SSF103473 12 205 4.05E-72 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS12630 a84c4b0a511a6a2f6c6f7eeeb33c5546 514 SUPERFAMILY SSF103473 255 426 4.05E-72 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS12630 a84c4b0a511a6a2f6c6f7eeeb33c5546 514 SUPERFAMILY SSF103473 472 496 4.05E-72 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS12630 a84c4b0a511a6a2f6c6f7eeeb33c5546 514 PRINTS PR01036 Tetracycline resistance protein TetB signature 143 167 7.1E-5 T 09-03-2017 NA29_RS12630 a84c4b0a511a6a2f6c6f7eeeb33c5546 514 PRINTS PR01036 Tetracycline resistance protein TetB signature 407 426 7.1E-5 T 09-03-2017 NA29_RS12630 a84c4b0a511a6a2f6c6f7eeeb33c5546 514 PRINTS PR01036 Tetracycline resistance protein TetB signature 22 46 7.1E-5 T 09-03-2017 NA29_RS12630 a84c4b0a511a6a2f6c6f7eeeb33c5546 514 PRINTS PR01036 Tetracycline resistance protein TetB signature 113 133 7.1E-5 T 09-03-2017 NA29_RS12630 a84c4b0a511a6a2f6c6f7eeeb33c5546 514 Gene3D G3DSA:1.20.1250.20 477 501 4.4E-16 T 09-03-2017 NA29_RS12630 a84c4b0a511a6a2f6c6f7eeeb33c5546 514 Gene3D G3DSA:1.20.1250.20 267 427 4.4E-16 T 09-03-2017 NA29_RS12630 a84c4b0a511a6a2f6c6f7eeeb33c5546 514 Gene3D G3DSA:1.20.1250.20 20 201 1.1E-34 T 09-03-2017 NA29_RS12630 a84c4b0a511a6a2f6c6f7eeeb33c5546 514 Pfam PF07690 Major Facilitator Superfamily 23 416 9.3E-61 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS11845 0a1f88014837040b8e649f1bf3cad7fb 323 Gene3D G3DSA:3.40.190.10 184 269 1.6E-8 T 09-03-2017 NA29_RS11845 0a1f88014837040b8e649f1bf3cad7fb 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 4.3E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11845 0a1f88014837040b8e649f1bf3cad7fb 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.1E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11845 0a1f88014837040b8e649f1bf3cad7fb 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.1E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11845 0a1f88014837040b8e649f1bf3cad7fb 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.1E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS11845 0a1f88014837040b8e649f1bf3cad7fb 323 Pfam PF03466 LysR substrate binding domain 95 301 2.2E-17 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS11845 0a1f88014837040b8e649f1bf3cad7fb 323 Gene3D G3DSA:3.40.190.10 96 183 2.6E-14 T 09-03-2017 NA29_RS11845 0a1f88014837040b8e649f1bf3cad7fb 323 SUPERFAMILY SSF46785 11 91 1.42E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11845 0a1f88014837040b8e649f1bf3cad7fb 323 Gene3D G3DSA:1.10.10.10 11 92 2.5E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11845 0a1f88014837040b8e649f1bf3cad7fb 323 SUPERFAMILY SSF53850 95 305 1.48E-19 T 09-03-2017 NA29_RS02875 121f4eae95ae232bd965d8b3667c179b 283 Pfam PF15916 Domain of unknown function (DUF4743) 5 114 4.5E-31 T 09-03-2017 IPR031804 Domain of unknown function DUF4743 NA29_RS02875 121f4eae95ae232bd965d8b3667c179b 283 SUPERFAMILY SSF55811 97 249 1.62E-16 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS02875 121f4eae95ae232bd965d8b3667c179b 283 Gene3D G3DSA:3.90.79.10 82 264 3.7E-41 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS04705 1268bf2153c6891df89e6219c861f82a 254 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 5 190 1.3E-59 T 09-03-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 NA29_RS04705 1268bf2153c6891df89e6219c861f82a 254 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 75 88 3.5E-18 T 09-03-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 NA29_RS04705 1268bf2153c6891df89e6219c861f82a 254 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 24 34 3.5E-18 T 09-03-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 NA29_RS04705 1268bf2153c6891df89e6219c861f82a 254 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 115 128 3.5E-18 T 09-03-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 NA29_RS04705 1268bf2153c6891df89e6219c861f82a 254 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 163 175 3.5E-18 T 09-03-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 NA29_RS04705 1268bf2153c6891df89e6219c861f82a 254 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 95 110 3.5E-18 T 09-03-2017 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 NA29_RS04705 1268bf2153c6891df89e6219c861f82a 254 Pfam PF01514 Secretory protein of YscJ/FliF family 7 186 1.0E-19 T 09-03-2017 IPR006182 Secretory protein YscJ/FliF NA29_RS08065 04e0488f304c4b272b9f486711506119 511 SMART SM00052 244 489 3.6E-66 T 09-03-2017 IPR001633 EAL domain NA29_RS08065 04e0488f304c4b272b9f486711506119 511 SUPERFAMILY SSF141868 254 493 7.06E-63 T 09-03-2017 IPR001633 EAL domain NA29_RS08065 04e0488f304c4b272b9f486711506119 511 Pfam PF12792 CSS motif domain associated with EAL 19 218 9.7E-21 T 09-03-2017 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain NA29_RS08065 04e0488f304c4b272b9f486711506119 511 Pfam PF00563 EAL domain 253 483 1.6E-54 T 09-03-2017 IPR001633 EAL domain NA29_RS08065 04e0488f304c4b272b9f486711506119 511 Gene3D G3DSA:3.20.20.450 253 492 8.0E-65 T 09-03-2017 IPR001633 EAL domain NA29_RS15500 903c68f9593f812724a66d748b24fa8d 306 SUPERFAMILY SSF53850 90 298 8.91E-37 T 09-03-2017 NA29_RS15500 903c68f9593f812724a66d748b24fa8d 306 Pfam PF03466 LysR substrate binding domain 88 295 4.3E-39 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS15500 903c68f9593f812724a66d748b24fa8d 306 Gene3D G3DSA:3.40.190.10 89 179 4.3E-25 T 09-03-2017 NA29_RS15500 903c68f9593f812724a66d748b24fa8d 306 SUPERFAMILY SSF46785 1 85 1.58E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15500 903c68f9593f812724a66d748b24fa8d 306 Gene3D G3DSA:1.10.10.10 1 86 4.1E-33 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS15500 903c68f9593f812724a66d748b24fa8d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.2E-11 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS15500 903c68f9593f812724a66d748b24fa8d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.2E-11 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS15500 903c68f9593f812724a66d748b24fa8d 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.2E-11 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS15500 903c68f9593f812724a66d748b24fa8d 306 Gene3D G3DSA:3.40.190.10 180 269 5.8E-26 T 09-03-2017 NA29_RS15500 903c68f9593f812724a66d748b24fa8d 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.3E-25 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS14640 7872801a6f92e7e1c1f8b409b7ee51ef 360 Gene3D G3DSA:1.10.340.30 193 299 3.6E-32 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 NA29_RS14640 7872801a6f92e7e1c1f8b409b7ee51ef 360 SMART SM00478 202 354 1.3E-17 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 NA29_RS14640 7872801a6f92e7e1c1f8b409b7ee51ef 360 Gene3D G3DSA:1.10.1670.10 302 356 1.3E-18 T 09-03-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 NA29_RS14640 7872801a6f92e7e1c1f8b409b7ee51ef 360 SUPERFAMILY SSF48150 182 352 1.01E-43 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 NA29_RS14640 7872801a6f92e7e1c1f8b409b7ee51ef 360 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 199 338 2.3E-11 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 NA29_RS09080 8f556eef30a4be3fed46c1a3b664fe94 589 Gene3D G3DSA:3.40.50.970 22 198 2.4E-74 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS09080 8f556eef30a4be3fed46c1a3b664fe94 589 SUPERFAMILY SSF52518 390 584 1.33E-67 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS09080 8f556eef30a4be3fed46c1a3b664fe94 589 Gene3D G3DSA:3.40.50.1220 207 374 4.4E-65 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS09080 8f556eef30a4be3fed46c1a3b664fe94 589 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 412 560 1.7E-51 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 NA29_RS09080 8f556eef30a4be3fed46c1a3b664fe94 589 SUPERFAMILY SSF52467 206 380 3.88E-65 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain NA29_RS09080 8f556eef30a4be3fed46c1a3b664fe94 589 Gene3D G3DSA:3.40.50.970 375 577 1.2E-76 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS09080 8f556eef30a4be3fed46c1a3b664fe94 589 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 23 583 8.1E-258 T 09-03-2017 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 NA29_RS09080 8f556eef30a4be3fed46c1a3b664fe94 589 SUPERFAMILY SSF52518 19 202 3.91E-64 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold NA29_RS09080 8f556eef30a4be3fed46c1a3b664fe94 589 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 213 348 4.8E-45 T 09-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 NA29_RS09080 8f556eef30a4be3fed46c1a3b664fe94 589 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 25 189 7.5E-58 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 NA29_RS21645 3354ee4ce2bbd9009c1f2a653348a405 422 Pfam PF01979 Amidohydrolase family 244 415 4.0E-6 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS21645 3354ee4ce2bbd9009c1f2a653348a405 422 SUPERFAMILY SSF51338 1 55 6.76E-25 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS21645 3354ee4ce2bbd9009c1f2a653348a405 422 SUPERFAMILY SSF51338 362 418 6.76E-25 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS21645 3354ee4ce2bbd9009c1f2a653348a405 422 Gene3D G3DSA:3.20.20.140 79 402 9.4E-76 T 09-03-2017 NA29_RS21645 3354ee4ce2bbd9009c1f2a653348a405 422 Gene3D G3DSA:2.30.40.10 1 78 6.5E-14 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS21645 3354ee4ce2bbd9009c1f2a653348a405 422 SUPERFAMILY SSF51556 66 354 5.79E-78 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS23955 898db763e9e8f58bf8ee1b2dd4095582 399 SUPERFAMILY SSF53383 1 396 1.22E-121 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS23955 898db763e9e8f58bf8ee1b2dd4095582 399 PRINTS PR00799 Aspartate aminotransferase signature 175 194 3.9E-35 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 NA29_RS23955 898db763e9e8f58bf8ee1b2dd4095582 399 PRINTS PR00799 Aspartate aminotransferase signature 341 359 3.9E-35 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 NA29_RS23955 898db763e9e8f58bf8ee1b2dd4095582 399 PRINTS PR00799 Aspartate aminotransferase signature 273 298 3.9E-35 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 NA29_RS23955 898db763e9e8f58bf8ee1b2dd4095582 399 PRINTS PR00799 Aspartate aminotransferase signature 206 218 3.9E-35 T 09-03-2017 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 NA29_RS23955 898db763e9e8f58bf8ee1b2dd4095582 399 Pfam PF00155 Aminotransferase class I and II 27 392 4.3E-80 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS23955 898db763e9e8f58bf8ee1b2dd4095582 399 Gene3D G3DSA:3.40.640.10 45 315 7.9E-107 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS00575 5a151283aec0e38a007bbae0ecff0609 285 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 273 3.1E-34 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS22490 957aa4b97f0535f649449eeb33f3ece2 317 PIRSF PIRSF004486 5 316 2.2E-94 T 09-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS22490 957aa4b97f0535f649449eeb33f3ece2 317 SUPERFAMILY SSF53335 220 315 2.59E-44 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS22490 957aa4b97f0535f649449eeb33f3ece2 317 SUPERFAMILY SSF53335 11 116 2.59E-44 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS22490 957aa4b97f0535f649449eeb33f3ece2 317 Gene3D G3DSA:1.10.150.170 116 222 3.5E-35 T 09-03-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS22490 957aa4b97f0535f649449eeb33f3ece2 317 Pfam PF01795 MraW methylase family 9 314 1.1E-99 T 09-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS22490 957aa4b97f0535f649449eeb33f3ece2 317 Gene3D G3DSA:3.40.50.150 223 315 1.5E-45 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS22490 957aa4b97f0535f649449eeb33f3ece2 317 Gene3D G3DSA:3.40.50.150 11 113 1.5E-45 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS22490 957aa4b97f0535f649449eeb33f3ece2 317 SUPERFAMILY SSF81799 117 220 5.36E-31 T 09-03-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS22490 957aa4b97f0535f649449eeb33f3ece2 317 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 9 314 1.6E-103 T 09-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS22490 957aa4b97f0535f649449eeb33f3ece2 317 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 11 315 36.617 T 09-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS20320 54cc5dc71799dc52468fade65c6efb8b 266 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS20320 54cc5dc71799dc52468fade65c6efb8b 266 SUPERFAMILY SSF52540 20 241 3.03E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20320 54cc5dc71799dc52468fade65c6efb8b 266 Pfam PF00005 ABC transporter 41 182 1.2E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS20320 54cc5dc71799dc52468fade65c6efb8b 266 Gene3D G3DSA:3.40.50.300 19 237 8.9E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20320 54cc5dc71799dc52468fade65c6efb8b 266 SMART SM00382 49 230 1.3E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS23310 b9fc4a514b58f858134ef5b79ca5ea57 378 SUPERFAMILY SSF69279 16 189 1.11E-25 T 09-03-2017 NA29_RS23310 b9fc4a514b58f858134ef5b79ca5ea57 378 Pfam PF05954 Phage late control gene D protein (GPD) 66 357 1.4E-21 T 09-03-2017 NA29_RS16320 06c913822115178aeee4e53324bad015 196 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 3 26 3.3E-6 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NA29_RS16320 06c913822115178aeee4e53324bad015 196 Gene3D G3DSA:3.40.50.740 110 178 2.7E-15 T 09-03-2017 NA29_RS16320 06c913822115178aeee4e53324bad015 196 SMART SM00926 44 105 6.0E-22 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16320 06c913822115178aeee4e53324bad015 196 Pfam PF00384 Molybdopterin oxidoreductase 108 141 2.5E-5 T 09-03-2017 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16320 06c913822115178aeee4e53324bad015 196 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 46 104 5.3E-20 T 09-03-2017 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16320 06c913822115178aeee4e53324bad015 196 Gene3D G3DSA:2.20.25.90 38 109 1.1E-25 T 09-03-2017 NA29_RS16320 06c913822115178aeee4e53324bad015 196 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 49 67 - T 09-03-2017 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 NA29_RS16320 06c913822115178aeee4e53324bad015 196 SUPERFAMILY SSF53706 37 196 9.42E-54 T 09-03-2017 NA29_RS15360 3b854ab10553279456ebb9813f05ed9c 702 PIRSF PIRSF015380 1 702 7.3E-208 T 09-03-2017 IPR011385 Site-specific recombinase Gcr NA29_RS15360 3b854ab10553279456ebb9813f05ed9c 702 Pfam PF10136 Site-specific recombinase 38 690 6.2E-234 T 09-03-2017 IPR011385 Site-specific recombinase Gcr NA29_RS14220 a7fe97a997bce681b7b640a745c0dbb7 164 Gene3D G3DSA:3.40.630.30 9 145 2.3E-23 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS14220 a7fe97a997bce681b7b640a745c0dbb7 164 SUPERFAMILY SSF55729 7 144 8.15E-25 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS14220 a7fe97a997bce681b7b640a745c0dbb7 164 Pfam PF13673 Acetyltransferase (GNAT) domain 51 129 6.5E-14 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS07965 7fdf6a14ffc6b50d2139d1b2c103b2ea 269 Pfam PF02649 Type I GTP cyclohydrolase folE2 10 259 1.3E-91 T 09-03-2017 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442 NA29_RS07965 7fdf6a14ffc6b50d2139d1b2c103b2ea 269 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 10 264 37.228 T 09-03-2017 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442 NA29_RS07965 7fdf6a14ffc6b50d2139d1b2c103b2ea 269 Gene3D G3DSA:3.10.270.10 9 263 3.6E-105 T 09-03-2017 NA29_RS00040 e0d64b2f05734f488cedde157d0a67d9 671 SUPERFAMILY SSF55874 16 165 1.17E-6 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00040 e0d64b2f05734f488cedde157d0a67d9 671 Gene3D G3DSA:3.30.565.10 16 193 3.6E-7 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00040 e0d64b2f05734f488cedde157d0a67d9 671 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 150 1.0E-5 T 09-03-2017 NA29_RS09295 9294e44d9f9d9d6197c419ff1a2ca5a6 354 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 42 280 7.0E-57 T 09-03-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 NA29_RS09295 9294e44d9f9d9d6197c419ff1a2ca5a6 354 PIRSF PIRSF006470 6 340 5.6E-80 T 09-03-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 NA29_RS09295 9294e44d9f9d9d6197c419ff1a2ca5a6 354 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 321 1.6E-73 T 09-03-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 NA29_RS24740 0d3ff57391f46df6150cbf6dd7bb8e75 333 SUPERFAMILY SSF53850 27 274 4.6E-36 T 09-03-2017 NA29_RS24740 0d3ff57391f46df6150cbf6dd7bb8e75 333 Gene3D G3DSA:3.40.190.10 118 236 7.0E-17 T 09-03-2017 NA29_RS24740 0d3ff57391f46df6150cbf6dd7bb8e75 333 SMART SM00062 27 268 0.0018 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS24740 0d3ff57391f46df6150cbf6dd7bb8e75 333 Pfam PF09084 NMT1/THI5 like 45 255 3.3E-23 T 09-03-2017 IPR015168 SsuA/THI5-like NA29_RS00485 c2a5f7fd1ca88c1ccb58a6bec3beec90 177 SMART SM00260 1 138 1.2E-10 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS00485 c2a5f7fd1ca88c1ccb58a6bec3beec90 177 SUPERFAMILY SSF50341 3 142 5.75E-25 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS00485 c2a5f7fd1ca88c1ccb58a6bec3beec90 177 Pfam PF01584 CheW-like domain 3 140 3.5E-23 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS10520 85aa756c35ffd7f2daa579c78a8bd618 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 111 131 - T 09-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 NA29_RS10520 85aa756c35ffd7f2daa579c78a8bd618 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 22 240 1.8E-45 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS10520 85aa756c35ffd7f2daa579c78a8bd618 272 Gene3D G3DSA:3.90.226.10 6 259 5.0E-73 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS10520 85aa756c35ffd7f2daa579c78a8bd618 272 SUPERFAMILY SSF52096 12 247 1.46E-69 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS20455 8977fa0f87891e9d3c7cd299134bd330 165 PRINTS PR01011 Glutathione peroxidase family signature 61 77 1.2E-21 T 09-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 NA29_RS20455 8977fa0f87891e9d3c7cd299134bd330 165 PRINTS PR01011 Glutathione peroxidase family signature 26 43 1.2E-21 T 09-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 NA29_RS20455 8977fa0f87891e9d3c7cd299134bd330 165 PRINTS PR01011 Glutathione peroxidase family signature 127 136 1.2E-21 T 09-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 NA29_RS20455 8977fa0f87891e9d3c7cd299134bd330 165 SUPERFAMILY SSF52833 7 163 2.98E-62 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS20455 8977fa0f87891e9d3c7cd299134bd330 165 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 64 71 - T 09-03-2017 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 NA29_RS20455 8977fa0f87891e9d3c7cd299134bd330 165 ProSitePatterns PS00460 Glutathione peroxidases active site. 28 43 - T 09-03-2017 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 NA29_RS20455 8977fa0f87891e9d3c7cd299134bd330 165 Pfam PF00255 Glutathione peroxidase 8 114 9.5E-40 T 09-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 NA29_RS20455 8977fa0f87891e9d3c7cd299134bd330 165 PIRSF PIRSF000303 1 165 1.1E-64 T 09-03-2017 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 NA29_RS20455 8977fa0f87891e9d3c7cd299134bd330 165 Gene3D G3DSA:3.40.30.10 7 163 2.9E-71 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS22750 56baf495e6cb2ddda0663d50ef38d305 146 Pfam PF13508 Acetyltransferase (GNAT) domain 61 127 3.2E-12 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS22750 56baf495e6cb2ddda0663d50ef38d305 146 Gene3D G3DSA:3.40.630.30 5 133 2.8E-22 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS22750 56baf495e6cb2ddda0663d50ef38d305 146 SUPERFAMILY SSF55729 6 132 4.08E-22 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS04650 78bcd42638cafc45727aeb18f2e93daa 256 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 3 241 1.5E-40 T 09-03-2017 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 NA29_RS04650 78bcd42638cafc45727aeb18f2e93daa 256 SUPERFAMILY SSF53167 1 244 1.44E-60 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NA29_RS04650 78bcd42638cafc45727aeb18f2e93daa 256 Gene3D G3DSA:3.40.50.1580 158 248 3.1E-65 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NA29_RS04650 78bcd42638cafc45727aeb18f2e93daa 256 Gene3D G3DSA:3.40.50.1580 1 126 3.1E-65 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NA29_RS04650 78bcd42638cafc45727aeb18f2e93daa 256 Pfam PF01048 Phosphorylase superfamily 3 248 1.3E-48 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 NA29_RS08855 0f838c169cea78766f7fb926ea33d545 167 SUPERFAMILY SSF46785 16 156 1.4E-30 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08855 0f838c169cea78766f7fb926ea33d545 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 97 6.1E-7 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS08855 0f838c169cea78766f7fb926ea33d545 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 81 6.1E-7 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS08855 0f838c169cea78766f7fb926ea33d545 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 101 117 6.1E-7 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS08855 0f838c169cea78766f7fb926ea33d545 167 SMART SM00347 41 141 4.2E-20 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS08855 0f838c169cea78766f7fb926ea33d545 167 Pfam PF01047 MarR family 48 105 4.3E-14 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS08855 0f838c169cea78766f7fb926ea33d545 167 Gene3D G3DSA:1.10.10.10 21 153 8.0E-33 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06595 b6eb8a5a4a6237f93c1a29469e3476a6 236 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS06595 b6eb8a5a4a6237f93c1a29469e3476a6 236 SMART SM00382 29 213 4.7E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS06595 b6eb8a5a4a6237f93c1a29469e3476a6 236 Pfam PF00005 ABC transporter 22 164 2.6E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS06595 b6eb8a5a4a6237f93c1a29469e3476a6 236 SUPERFAMILY SSF52540 4 227 3.0E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06595 b6eb8a5a4a6237f93c1a29469e3476a6 236 Gene3D G3DSA:3.40.50.300 2 226 4.4E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02810 a5b0e7315a0ac190d4a24c7af92f0721 381 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 3 380 2.1E-133 T 09-03-2017 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 NA29_RS02810 a5b0e7315a0ac190d4a24c7af92f0721 381 SUPERFAMILY SSF51556 49 169 9.43E-12 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS02810 a5b0e7315a0ac190d4a24c7af92f0721 381 SUPERFAMILY SSF51556 207 348 9.43E-12 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS02810 a5b0e7315a0ac190d4a24c7af92f0721 381 Gene3D G3DSA:2.30.40.10 1 91 1.2E-13 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS02810 a5b0e7315a0ac190d4a24c7af92f0721 381 Gene3D G3DSA:3.20.20.140 214 358 4.2E-7 T 09-03-2017 NA29_RS02810 a5b0e7315a0ac190d4a24c7af92f0721 381 Pfam PF01979 Amidohydrolase family 235 361 2.3E-6 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS02810 a5b0e7315a0ac190d4a24c7af92f0721 381 SUPERFAMILY SSF51338 347 361 4.8E-12 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS02810 a5b0e7315a0ac190d4a24c7af92f0721 381 SUPERFAMILY SSF51338 1 50 4.8E-12 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS02810 a5b0e7315a0ac190d4a24c7af92f0721 381 PIRSF PIRSF038971 1 381 3.3E-136 T 09-03-2017 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 NA29_RS22405 537a4b233b237c21c94c8e03706573c2 409 Pfam PF01960 ArgJ family 24 409 4.6E-139 T 09-03-2017 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 NA29_RS22405 537a4b233b237c21c94c8e03706573c2 409 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 409 156.306 T 09-03-2017 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 NA29_RS22405 537a4b233b237c21c94c8e03706573c2 409 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 24 407 3.0E-177 T 09-03-2017 NA29_RS22405 537a4b233b237c21c94c8e03706573c2 409 Gene3D G3DSA:3.60.70.12 11 280 2.8E-92 T 09-03-2017 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 NA29_RS22405 537a4b233b237c21c94c8e03706573c2 409 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 15 409 9.1E-119 T 09-03-2017 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 NA29_RS22405 537a4b233b237c21c94c8e03706573c2 409 SUPERFAMILY SSF56266 16 406 1.96E-135 T 09-03-2017 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 NA29_RS12880 5071336453ca23efabcdb2bdb0374d4c 531 Pfam PF00005 ABC transporter 335 466 6.6E-19 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS12880 5071336453ca23efabcdb2bdb0374d4c 531 Pfam PF00005 ABC transporter 18 184 6.3E-19 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS12880 5071336453ca23efabcdb2bdb0374d4c 531 Pfam PF12848 ABC transporter 224 309 4.2E-22 T 09-03-2017 IPR032781 ABC-transporter extension domain NA29_RS12880 5071336453ca23efabcdb2bdb0374d4c 531 SUPERFAMILY SSF52540 296 523 5.57E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS12880 5071336453ca23efabcdb2bdb0374d4c 531 SUPERFAMILY SSF52540 6 237 9.69E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS12880 5071336453ca23efabcdb2bdb0374d4c 531 Gene3D G3DSA:3.40.50.300 2 270 5.3E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS12880 5071336453ca23efabcdb2bdb0374d4c 531 Gene3D G3DSA:3.40.50.300 319 528 1.5E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS12880 5071336453ca23efabcdb2bdb0374d4c 531 SMART SM00382 26 238 4.8E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS12880 5071336453ca23efabcdb2bdb0374d4c 531 SMART SM00382 343 511 6.0E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS23990 853c3a948634320076a64bbe7aa1a733 269 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 5 269 7.0E-130 T 09-03-2017 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase GO:0019439 NA29_RS23990 853c3a948634320076a64bbe7aa1a733 269 Gene3D G3DSA:3.90.850.10 5 269 2.5E-81 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS23990 853c3a948634320076a64bbe7aa1a733 269 SUPERFAMILY SSF56529 5 269 1.04E-73 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS23990 853c3a948634320076a64bbe7aa1a733 269 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 90 264 1.6E-6 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS05685 7a425138d1419b90a714856d8976d9aa 251 SUPERFAMILY SSF53850 26 250 7.85E-64 T 09-03-2017 NA29_RS05685 7a425138d1419b90a714856d8976d9aa 251 PIRSF PIRSF004846 2 251 1.7E-65 T 09-03-2017 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 NA29_RS05685 7a425138d1419b90a714856d8976d9aa 251 Pfam PF13531 Bacterial extracellular solute-binding protein 25 248 7.5E-49 T 09-03-2017 NA29_RS05685 7a425138d1419b90a714856d8976d9aa 251 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 29 247 8.3E-64 T 09-03-2017 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 NA29_RS05685 7a425138d1419b90a714856d8976d9aa 251 Gene3D G3DSA:3.40.190.10 105 210 1.6E-39 T 09-03-2017 NA29_RS05685 7a425138d1419b90a714856d8976d9aa 251 Gene3D G3DSA:3.40.190.10 28 104 1.0E-14 T 09-03-2017 NA29_RS05685 7a425138d1419b90a714856d8976d9aa 251 Gene3D G3DSA:3.40.190.10 211 248 1.0E-14 T 09-03-2017 NA29_RS14610 4a30968a9e15e8256e8013cb96ceaaee 416 SUPERFAMILY SSF103473 9 407 1.57E-57 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS14610 4a30968a9e15e8256e8013cb96ceaaee 416 Pfam PF07690 Major Facilitator Superfamily 26 358 3.3E-41 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS14610 4a30968a9e15e8256e8013cb96ceaaee 416 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 89 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS14610 4a30968a9e15e8256e8013cb96ceaaee 416 Gene3D G3DSA:1.20.1250.20 23 200 5.1E-29 T 09-03-2017 NA29_RS14610 4a30968a9e15e8256e8013cb96ceaaee 416 Gene3D G3DSA:1.20.1250.20 217 411 6.5E-8 T 09-03-2017 NA29_RS12480 47d025f75628000a0d3e5ec6f57f4b5a 404 Pfam PF07690 Major Facilitator Superfamily 29 346 6.5E-32 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS12480 47d025f75628000a0d3e5ec6f57f4b5a 404 Gene3D G3DSA:1.20.1250.20 23 213 1.5E-31 T 09-03-2017 NA29_RS12480 47d025f75628000a0d3e5ec6f57f4b5a 404 PRINTS PR01035 Tetracycline resistance protein signature 61 80 5.9E-5 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NA29_RS12480 47d025f75628000a0d3e5ec6f57f4b5a 404 PRINTS PR01035 Tetracycline resistance protein signature 31 47 5.9E-5 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NA29_RS12480 47d025f75628000a0d3e5ec6f57f4b5a 404 PRINTS PR01035 Tetracycline resistance protein signature 311 331 5.9E-5 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NA29_RS12480 47d025f75628000a0d3e5ec6f57f4b5a 404 PRINTS PR01035 Tetracycline resistance protein signature 179 199 5.9E-5 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NA29_RS12480 47d025f75628000a0d3e5ec6f57f4b5a 404 PRINTS PR01035 Tetracycline resistance protein signature 119 140 5.9E-5 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 NA29_RS12480 47d025f75628000a0d3e5ec6f57f4b5a 404 Gene3D G3DSA:1.20.1250.20 218 402 4.7E-11 T 09-03-2017 NA29_RS12480 47d025f75628000a0d3e5ec6f57f4b5a 404 SUPERFAMILY SSF103473 8 402 1.44E-58 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS16130 be77ce7d421c1673378bad7fc81010e4 319 SUPERFAMILY SSF51695 37 310 3.92E-51 T 09-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NA29_RS16130 be77ce7d421c1673378bad7fc81010e4 319 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 42 304 1.3E-26 T 09-03-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 NA29_RS16130 be77ce7d421c1673378bad7fc81010e4 319 Gene3D G3DSA:3.20.20.190 19 315 1.1E-57 T 09-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NA29_RS16710 3886f8d9acdc906ed12e3ba5cd799587 409 ProSitePatterns PS00217 Sugar transport proteins signature 2. 110 135 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS16710 3886f8d9acdc906ed12e3ba5cd799587 409 Pfam PF00083 Sugar (and other) transporter 330 409 1.2E-6 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS16710 3886f8d9acdc906ed12e3ba5cd799587 409 Gene3D G3DSA:1.20.1250.20 13 202 2.9E-35 T 09-03-2017 NA29_RS16710 3886f8d9acdc906ed12e3ba5cd799587 409 SUPERFAMILY SSF103473 5 408 1.44E-80 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS16710 3886f8d9acdc906ed12e3ba5cd799587 409 Pfam PF07690 Major Facilitator Superfamily 23 289 1.6E-36 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS16710 3886f8d9acdc906ed12e3ba5cd799587 409 Gene3D G3DSA:1.20.1250.20 222 406 3.7E-25 T 09-03-2017 NA29_RS15385 d62155b0cdc643fd86767a7e20a98521 212 SUPERFAMILY SSF48498 85 210 2.78E-32 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS15385 d62155b0cdc643fd86767a7e20a98521 212 Gene3D G3DSA:1.10.10.60 8 65 1.6E-23 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS15385 d62155b0cdc643fd86767a7e20a98521 212 Gene3D G3DSA:1.10.357.10 66 206 6.3E-35 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS15385 d62155b0cdc643fd86767a7e20a98521 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 3.5E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS15385 d62155b0cdc643fd86767a7e20a98521 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 3.5E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS15385 d62155b0cdc643fd86767a7e20a98521 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 4.5E-14 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS15385 d62155b0cdc643fd86767a7e20a98521 212 SUPERFAMILY SSF46689 8 85 3.83E-21 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS15690 6aa3e5f71615a6e5ec97ac2a6e517c68 415 Gene3D G3DSA:3.30.2010.10 199 291 3.3E-19 T 09-03-2017 NA29_RS15690 6aa3e5f71615a6e5ec97ac2a6e517c68 415 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 24 202 7.2E-52 T 09-03-2017 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 NA29_RS15690 6aa3e5f71615a6e5ec97ac2a6e517c68 415 Pfam PF01435 Peptidase family M48 206 412 2.0E-39 T 09-03-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 NA29_RS14115 6704cbf155098fbbbc3d6c042fb1e2d9 315 Pfam PF03547 Membrane transport protein 158 308 1.9E-17 T 09-03-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 NA29_RS14115 6704cbf155098fbbbc3d6c042fb1e2d9 315 Pfam PF03547 Membrane transport protein 4 147 3.0E-16 T 09-03-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 NA29_RS18610 4d892530884e8fb1647ebb313473fb07 234 Gene3D G3DSA:1.10.10.10 129 230 1.4E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS18610 4d892530884e8fb1647ebb313473fb07 234 Gene3D G3DSA:3.40.50.2300 1 126 1.9E-39 T 09-03-2017 NA29_RS18610 4d892530884e8fb1647ebb313473fb07 234 SMART SM00862 151 227 5.2E-21 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS18610 4d892530884e8fb1647ebb313473fb07 234 Pfam PF00072 Response regulator receiver domain 4 112 7.1E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS18610 4d892530884e8fb1647ebb313473fb07 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 8.1E-23 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS18610 4d892530884e8fb1647ebb313473fb07 234 SUPERFAMILY SSF46894 128 228 6.24E-26 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS18610 4d892530884e8fb1647ebb313473fb07 234 SUPERFAMILY SSF52172 1 127 3.42E-41 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS18610 4d892530884e8fb1647ebb313473fb07 234 SMART SM00448 2 112 1.4E-40 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS14075 56a5998cdda5f080e351cdf641922011 284 SUPERFAMILY SSF53474 2 281 1.32E-87 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS14075 56a5998cdda5f080e351cdf641922011 284 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 3 281 3.3E-140 T 09-03-2017 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 NA29_RS14075 56a5998cdda5f080e351cdf641922011 284 Pfam PF00756 Putative esterase 22 274 3.6E-50 T 09-03-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 NA29_RS14075 56a5998cdda5f080e351cdf641922011 284 Gene3D G3DSA:3.40.50.1820 2 282 5.4E-78 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS15365 3168ebf01272e66f8a4d2ebcc8348e54 158 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 151 7.0E-42 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily NA29_RS15365 3168ebf01272e66f8a4d2ebcc8348e54 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 83 98 3.8E-22 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 NA29_RS15365 3168ebf01272e66f8a4d2ebcc8348e54 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 125 140 3.8E-22 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 NA29_RS15365 3168ebf01272e66f8a4d2ebcc8348e54 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 3.8E-22 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 NA29_RS15365 3168ebf01272e66f8a4d2ebcc8348e54 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 49 65 3.8E-22 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 NA29_RS15365 3168ebf01272e66f8a4d2ebcc8348e54 158 SUPERFAMILY SSF52788 2 151 9.81E-52 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily NA29_RS15365 3168ebf01272e66f8a4d2ebcc8348e54 158 SMART SM00226 4 153 8.1E-54 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily NA29_RS15365 3168ebf01272e66f8a4d2ebcc8348e54 158 Gene3D G3DSA:3.40.50.270 1 153 6.2E-53 T 09-03-2017 NA29_RS16340 afcb146c2d627b15e2fe11cf171a49e8 220 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 55 203 4.2E-42 T 09-03-2017 IPR005586 ABC-type transport auxiliary lipoprotein component NA29_RS16340 afcb146c2d627b15e2fe11cf171a49e8 220 Gene3D G3DSA:3.40.50.10610 29 212 2.8E-24 T 09-03-2017 IPR005586 ABC-type transport auxiliary lipoprotein component NA29_RS16340 afcb146c2d627b15e2fe11cf171a49e8 220 SUPERFAMILY SSF159594 53 209 3.92E-32 T 09-03-2017 NA29_RS17035 870cd1ed951f354c3c8e4beeadaec25c 473 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 462 1.0E-84 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NA29_RS17035 870cd1ed951f354c3c8e4beeadaec25c 473 SUPERFAMILY SSF56954 3 31 2.35E-86 T 09-03-2017 NA29_RS17035 870cd1ed951f354c3c8e4beeadaec25c 473 SUPERFAMILY SSF56954 63 462 2.35E-86 T 09-03-2017 NA29_RS17035 870cd1ed951f354c3c8e4beeadaec25c 473 Pfam PF02321 Outer membrane efflux protein 72 253 1.3E-18 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS17035 870cd1ed951f354c3c8e4beeadaec25c 473 Pfam PF02321 Outer membrane efflux protein 283 461 2.2E-16 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS17035 870cd1ed951f354c3c8e4beeadaec25c 473 Gene3D G3DSA:1.20.1600.10 59 462 2.8E-86 T 09-03-2017 NA29_RS24780 2d7a87e7cd7c9bfbbb3e5523b02d36b2 112 Gene3D G3DSA:1.20.58.380 6 93 6.7E-29 T 09-03-2017 NA29_RS24780 2d7a87e7cd7c9bfbbb3e5523b02d36b2 112 Pfam PF05400 Flagellar protein FliT 21 106 3.4E-24 T 09-03-2017 IPR008622 Flagellar protein FliT NA29_RS21275 a115fadd99864b427332df13b30bf46e 160 SUPERFAMILY SSF103088 43 157 7.19E-34 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS21275 a115fadd99864b427332df13b30bf46e 160 ProSitePatterns PS01068 OmpA-like domain. 89 133 - T 09-03-2017 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 NA29_RS21275 a115fadd99864b427332df13b30bf46e 160 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 140 160 2.2E-8 T 09-03-2017 NA29_RS21275 a115fadd99864b427332df13b30bf46e 160 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 102 119 2.2E-8 T 09-03-2017 NA29_RS21275 a115fadd99864b427332df13b30bf46e 160 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 120 139 2.2E-8 T 09-03-2017 NA29_RS21275 a115fadd99864b427332df13b30bf46e 160 Gene3D G3DSA:3.30.1330.60 44 157 2.5E-33 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS21275 a115fadd99864b427332df13b30bf46e 160 PRINTS PR01021 OMPA domain signature 102 118 2.1E-12 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NA29_RS21275 a115fadd99864b427332df13b30bf46e 160 PRINTS PR01021 OMPA domain signature 87 102 2.1E-12 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NA29_RS21275 a115fadd99864b427332df13b30bf46e 160 PRINTS PR01021 OMPA domain signature 57 79 2.1E-12 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NA29_RS21275 a115fadd99864b427332df13b30bf46e 160 Pfam PF00691 OmpA family 56 151 7.5E-20 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS17480 646f74662e9d500bc04d97558d1adbc9 200 SUPERFAMILY SSF46689 10 80 2.98E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS17480 646f74662e9d500bc04d97558d1adbc9 200 Gene3D G3DSA:1.10.357.10 2 195 9.5E-24 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS17480 646f74662e9d500bc04d97558d1adbc9 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 1.3E-6 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS17480 646f74662e9d500bc04d97558d1adbc9 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 1.3E-6 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS17480 646f74662e9d500bc04d97558d1adbc9 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 6.8E-12 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS02730 caf4585fcd589958b5f70832cd869ff2 321 SUPERFAMILY SSF75138 12 139 5.1E-30 T 09-03-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like NA29_RS02730 caf4585fcd589958b5f70832cd869ff2 321 SUPERFAMILY SSF53795 140 306 3.66E-35 T 09-03-2017 NA29_RS02730 caf4585fcd589958b5f70832cd869ff2 321 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 5 313 36.419 T 09-03-2017 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 NA29_RS02730 caf4585fcd589958b5f70832cd869ff2 321 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 11 310 1.9E-96 T 09-03-2017 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 NA29_RS02730 caf4585fcd589958b5f70832cd869ff2 321 Pfam PF02603 HPr Serine kinase N terminus 7 134 4.6E-24 T 09-03-2017 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 NA29_RS02730 caf4585fcd589958b5f70832cd869ff2 321 Gene3D G3DSA:3.40.1390.20 12 138 3.0E-34 T 09-03-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like NA29_RS02730 caf4585fcd589958b5f70832cd869ff2 321 Pfam PF07475 HPr Serine kinase C-terminal domain 139 306 5.0E-60 T 09-03-2017 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 NA29_RS02730 caf4585fcd589958b5f70832cd869ff2 321 Gene3D G3DSA:3.40.50.300 141 312 2.2E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01035 2717dc8af0c30ce21d9480e05ae81ec8 273 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 198 209 3.6E-16 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial NA29_RS01035 2717dc8af0c30ce21d9480e05ae81ec8 273 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 187 197 3.6E-16 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial NA29_RS01035 2717dc8af0c30ce21d9480e05ae81ec8 273 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 130 147 3.6E-16 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial NA29_RS01035 2717dc8af0c30ce21d9480e05ae81ec8 273 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 210 225 3.6E-16 T 09-03-2017 IPR014032 Peptidase A24A, prepilin type IV, bacterial NA29_RS01035 2717dc8af0c30ce21d9480e05ae81ec8 273 Pfam PF01478 Type IV leader peptidase family 126 227 3.0E-20 T 09-03-2017 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 NA29_RS01035 2717dc8af0c30ce21d9480e05ae81ec8 273 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 3 108 2.4E-31 T 09-03-2017 IPR010627 Peptidase A24A, N-terminal NA29_RS17450 7941925d83b7e7723e6af62e841d033a 227 Pfam PF01713 Smr domain 135 215 7.0E-27 T 09-03-2017 IPR002625 Smr domain NA29_RS17450 7941925d83b7e7723e6af62e841d033a 227 SUPERFAMILY SSF160443 133 215 2.09E-19 T 09-03-2017 IPR002625 Smr domain NA29_RS17450 7941925d83b7e7723e6af62e841d033a 227 SMART SM00463 132 216 2.2E-14 T 09-03-2017 IPR002625 Smr domain NA29_RS11820 9ea7a38b1da06edc1741bbfc344f6bc7 299 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 2 250 1.4E-58 T 09-03-2017 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 NA29_RS11820 9ea7a38b1da06edc1741bbfc344f6bc7 299 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 35 267 2.3E-54 T 09-03-2017 NA29_RS11820 9ea7a38b1da06edc1741bbfc344f6bc7 299 SUPERFAMILY SSF53850 55 242 3.53E-35 T 09-03-2017 NA29_RS11820 9ea7a38b1da06edc1741bbfc344f6bc7 299 Gene3D G3DSA:3.40.190.10 120 270 2.6E-11 T 09-03-2017 NA29_RS03055 3016bfec43f0e75330f06f0dc6e7f314 397 Pfam PF04326 Putative DNA-binding domain 25 154 1.0E-11 T 09-03-2017 IPR007421 Schlafen, AAA domain GO:0005524 NA29_RS24170 a561df58b938c48e08e10a1cd2dd4f96 267 Pfam PF05138 Phenylacetic acid catabolic protein 4 267 3.0E-89 T 09-03-2017 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 NA29_RS24170 a561df58b938c48e08e10a1cd2dd4f96 267 Gene3D G3DSA:1.20.1260.10 5 267 1.3E-88 T 09-03-2017 IPR012347 Ferritin-related NA29_RS24170 a561df58b938c48e08e10a1cd2dd4f96 267 SUPERFAMILY SSF47240 6 261 6.76E-73 T 09-03-2017 IPR009078 Ferritin-like superfamily NA29_RS24170 a561df58b938c48e08e10a1cd2dd4f96 267 PIRSF PIRSF037834 1 267 1.1E-100 T 09-03-2017 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 NA29_RS24170 a561df58b938c48e08e10a1cd2dd4f96 267 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 14 267 4.6E-84 T 09-03-2017 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 NA29_RS21615 4f1f815a236d6b77bf3fd2a60978e20a 377 SUPERFAMILY SSF53756 10 362 1.08E-73 T 09-03-2017 NA29_RS21615 4f1f815a236d6b77bf3fd2a60978e20a 377 Pfam PF00534 Glycosyl transferases group 1 188 342 5.5E-33 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 NA29_RS21615 4f1f815a236d6b77bf3fd2a60978e20a 377 Pfam PF13439 Glycosyltransferase Family 4 22 174 2.6E-12 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 NA29_RS21615 4f1f815a236d6b77bf3fd2a60978e20a 377 Gene3D G3DSA:3.40.50.2000 185 342 3.8E-28 T 09-03-2017 NA29_RS03700 9664b345eaf204c483630969f625df29 239 SUPERFAMILY SSF52833 16 106 3.59E-24 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS03700 9664b345eaf204c483630969f625df29 239 Pfam PF00043 Glutathione S-transferase, C-terminal domain 148 226 1.1E-8 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal NA29_RS03700 9664b345eaf204c483630969f625df29 239 Gene3D G3DSA:1.20.1050.10 106 229 3.4E-39 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS03700 9664b345eaf204c483630969f625df29 239 Pfam PF02798 Glutathione S-transferase, N-terminal domain 25 103 5.0E-14 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS03700 9664b345eaf204c483630969f625df29 239 Gene3D G3DSA:3.40.30.10 11 105 3.7E-30 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS03700 9664b345eaf204c483630969f625df29 239 SUPERFAMILY SSF47616 106 235 1.02E-31 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS15290 6e27d46aece92ba7dc755330af240bea 514 Gene3D G3DSA:3.30.930.10 162 509 2.1E-117 T 09-03-2017 NA29_RS15290 6e27d46aece92ba7dc755330af240bea 514 Gene3D G3DSA:2.40.50.140 22 159 3.5E-45 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS15290 6e27d46aece92ba7dc755330af240bea 514 Pfam PF00152 tRNA synthetases class II (D, K and N) 167 510 9.3E-84 T 09-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS15290 6e27d46aece92ba7dc755330af240bea 514 SUPERFAMILY SSF50249 19 160 1.81E-40 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS15290 6e27d46aece92ba7dc755330af240bea 514 SUPERFAMILY SSF55681 167 511 1.7E-119 T 09-03-2017 NA29_RS15290 6e27d46aece92ba7dc755330af240bea 514 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 22 512 1.5E-197 T 09-03-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 NA29_RS15290 6e27d46aece92ba7dc755330af240bea 514 Pfam PF01336 OB-fold nucleic acid binding domain 74 151 2.5E-12 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 NA29_RS15290 6e27d46aece92ba7dc755330af240bea 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 267 284 2.5E-38 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 NA29_RS15290 6e27d46aece92ba7dc755330af240bea 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 249 262 2.5E-38 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 NA29_RS15290 6e27d46aece92ba7dc755330af240bea 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 220 236 2.5E-38 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 NA29_RS15290 6e27d46aece92ba7dc755330af240bea 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 395 411 2.5E-38 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 NA29_RS15290 6e27d46aece92ba7dc755330af240bea 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 214 2.5E-38 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 NA29_RS15290 6e27d46aece92ba7dc755330af240bea 514 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 27 513 44.233 T 09-03-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 NA29_RS19920 215caf34857d9c22c3f98d63e0f22006 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 231 241 2.4E-28 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS19920 215caf34857d9c22c3f98d63e0f22006 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 403 420 2.4E-28 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS19920 215caf34857d9c22c3f98d63e0f22006 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 202 216 2.4E-28 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS19920 215caf34857d9c22c3f98d63e0f22006 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 300 312 2.4E-28 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS19920 215caf34857d9c22c3f98d63e0f22006 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 350 366 2.4E-28 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS19920 215caf34857d9c22c3f98d63e0f22006 436 Gene3D G3DSA:3.30.70.1170 153 210 9.8E-14 T 09-03-2017 NA29_RS19920 215caf34857d9c22c3f98d63e0f22006 436 Pfam PF01189 16S rRNA methyltransferase RsmB/F 221 418 1.6E-51 T 09-03-2017 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS19920 215caf34857d9c22c3f98d63e0f22006 436 Gene3D G3DSA:3.40.50.150 212 420 3.0E-56 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS19920 215caf34857d9c22c3f98d63e0f22006 436 SUPERFAMILY SSF53335 119 420 1.5E-72 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS19920 215caf34857d9c22c3f98d63e0f22006 436 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 125 215 3.1E-7 T 09-03-2017 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901 NA29_RS20415 e36a346c24be9754e784caf5f8d6f8cf 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 350 2.7E-167 T 09-03-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 NA29_RS20415 e36a346c24be9754e784caf5f8d6f8cf 357 Pfam PF00793 DAHP synthetase I family 41 337 3.0E-105 T 09-03-2017 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 NA29_RS20415 e36a346c24be9754e784caf5f8d6f8cf 357 SUPERFAMILY SSF51569 8 349 6.18E-139 T 09-03-2017 NA29_RS20415 e36a346c24be9754e784caf5f8d6f8cf 357 Gene3D G3DSA:3.20.20.70 10 350 1.6E-157 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS20415 e36a346c24be9754e784caf5f8d6f8cf 357 PIRSF PIRSF001361 2 353 2.8E-161 T 09-03-2017 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 NA29_RS03845 70118b3345665a3174b005b1b1e6e807 415 Gene3D G3DSA:3.20.20.450 32 252 2.7E-35 T 09-03-2017 IPR001633 EAL domain NA29_RS03845 70118b3345665a3174b005b1b1e6e807 415 SUPERFAMILY SSF141868 33 252 2.09E-39 T 09-03-2017 IPR001633 EAL domain NA29_RS03845 70118b3345665a3174b005b1b1e6e807 415 Pfam PF00563 EAL domain 32 252 1.4E-36 T 09-03-2017 IPR001633 EAL domain NA29_RS03845 70118b3345665a3174b005b1b1e6e807 415 SMART SM00052 13 261 7.8E-9 T 09-03-2017 IPR001633 EAL domain NA29_RS03845 70118b3345665a3174b005b1b1e6e807 415 SUPERFAMILY SSF103190 312 415 2.98E-14 T 09-03-2017 IPR029151 Periplasmic sensor domain-like NA29_RS03845 70118b3345665a3174b005b1b1e6e807 415 Gene3D G3DSA:3.30.450.20 320 415 1.4E-13 T 09-03-2017 NA29_RS04740 3c2b6b0c642a648313c16f46b3a19e55 526 Pfam PF03958 Bacterial type II/III secretion system short domain 172 280 2.1E-14 T 09-03-2017 IPR005644 NolW-like NA29_RS04740 3c2b6b0c642a648313c16f46b3a19e55 526 Pfam PF00263 Bacterial type II and III secretion system protein 345 517 4.5E-32 T 09-03-2017 IPR004846 Type II/III secretion system GO:0009306 NA29_RS04740 3c2b6b0c642a648313c16f46b3a19e55 526 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 24 518 7.2E-136 T 09-03-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 NA29_RS04740 3c2b6b0c642a648313c16f46b3a19e55 526 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 466 499 - T 09-03-2017 IPR004845 Type II secretion system GspD, conserved site GO:0008565 NA29_RS04740 3c2b6b0c642a648313c16f46b3a19e55 526 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 183 200 2.7E-32 T 09-03-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 NA29_RS04740 3c2b6b0c642a648313c16f46b3a19e55 526 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 392 407 2.7E-32 T 09-03-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 NA29_RS04740 3c2b6b0c642a648313c16f46b3a19e55 526 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 499 518 2.7E-32 T 09-03-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 NA29_RS04740 3c2b6b0c642a648313c16f46b3a19e55 526 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 283 303 2.7E-32 T 09-03-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 NA29_RS04740 3c2b6b0c642a648313c16f46b3a19e55 526 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 358 377 2.7E-32 T 09-03-2017 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 NA29_RS25260 7926a131d6b5f0cc8b06d0e11195018e 315 SUPERFAMILY SSF53807 56 313 5.1E-47 T 09-03-2017 NA29_RS25260 7926a131d6b5f0cc8b06d0e11195018e 315 Gene3D G3DSA:3.40.50.1980 187 313 9.1E-20 T 09-03-2017 NA29_RS25260 7926a131d6b5f0cc8b06d0e11195018e 315 Gene3D G3DSA:3.40.50.1980 56 169 1.1E-19 T 09-03-2017 NA29_RS25260 7926a131d6b5f0cc8b06d0e11195018e 315 Pfam PF01497 Periplasmic binding protein 59 289 2.6E-27 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 NA29_RS16505 bb1df3bd12cc4252cf55a26004318525 285 SUPERFAMILY SSF103481 60 137 2.35E-10 T 09-03-2017 NA29_RS16505 bb1df3bd12cc4252cf55a26004318525 285 SUPERFAMILY SSF103481 182 284 1.44E-12 T 09-03-2017 NA29_RS16505 bb1df3bd12cc4252cf55a26004318525 285 Pfam PF00892 EamA-like transporter family 145 281 8.7E-11 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS16845 bed9de2be354a59f1dae0ef837beb0c7 251 Pfam PF00106 short chain dehydrogenase 5 199 3.6E-37 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16845 bed9de2be354a59f1dae0ef837beb0c7 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 9.6E-21 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16845 bed9de2be354a59f1dae0ef837beb0c7 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 9.6E-21 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16845 bed9de2be354a59f1dae0ef837beb0c7 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 9.6E-21 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16845 bed9de2be354a59f1dae0ef837beb0c7 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 9.6E-21 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16845 bed9de2be354a59f1dae0ef837beb0c7 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 9.6E-21 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16845 bed9de2be354a59f1dae0ef837beb0c7 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 9.6E-21 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS16845 bed9de2be354a59f1dae0ef837beb0c7 251 SUPERFAMILY SSF51735 3 238 3.53E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16845 bed9de2be354a59f1dae0ef837beb0c7 251 Gene3D G3DSA:3.40.50.720 2 237 8.6E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS10045 20d25604e3044ac608a17ecdae845db2 175 SUPERFAMILY SSF69118 3 173 3.01E-36 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS10045 20d25604e3044ac608a17ecdae845db2 175 Hamap MF_01676 Alkyl hydroperoxide reductase AhpD [ahpD]. 1 175 70.483 T 09-03-2017 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS10045 20d25604e3044ac608a17ecdae845db2 175 Pfam PF02627 Carboxymuconolactone decarboxylase family 103 173 3.3E-10 T 09-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS10045 20d25604e3044ac608a17ecdae845db2 175 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 111 161 2.0E-8 T 09-03-2017 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS10045 20d25604e3044ac608a17ecdae845db2 175 Gene3D G3DSA:1.20.1290.10 4 172 7.1E-40 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS21270 a1133bbe92c81c6b7b29ad093df1d4a7 417 Gene3D G3DSA:3.40.50.1110 194 398 9.9E-31 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain NA29_RS21270 a1133bbe92c81c6b7b29ad093df1d4a7 417 SUPERFAMILY SSF52266 193 399 8.16E-48 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain NA29_RS21270 a1133bbe92c81c6b7b29ad093df1d4a7 417 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 197 393 1.1E-27 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain NA29_RS21570 153b34d81e3c3963d780fd6e30bff4cc 234 SUPERFAMILY SSF46689 15 88 1.5E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS21570 153b34d81e3c3963d780fd6e30bff4cc 234 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 72 1.7E-11 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS21570 153b34d81e3c3963d780fd6e30bff4cc 234 Gene3D G3DSA:1.10.357.10 9 209 1.2E-27 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS21570 153b34d81e3c3963d780fd6e30bff4cc 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 3.6E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS21570 153b34d81e3c3963d780fd6e30bff4cc 234 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 3.6E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS10790 ccffbb1c99e0252e601bd01276c00d34 312 SUPERFAMILY SSF52402 1 147 3.1E-32 T 09-03-2017 NA29_RS10790 ccffbb1c99e0252e601bd01276c00d34 312 Gene3D G3DSA:3.40.50.620 1 147 1.2E-34 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS10790 ccffbb1c99e0252e601bd01276c00d34 312 PRINTS PR01438 Universal stress protein signature 126 148 4.0E-19 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS10790 ccffbb1c99e0252e601bd01276c00d34 312 PRINTS PR01438 Universal stress protein signature 108 120 4.0E-19 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS10790 ccffbb1c99e0252e601bd01276c00d34 312 PRINTS PR01438 Universal stress protein signature 2 20 4.0E-19 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS10790 ccffbb1c99e0252e601bd01276c00d34 312 Gene3D G3DSA:3.40.50.620 162 305 1.2E-33 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS10790 ccffbb1c99e0252e601bd01276c00d34 312 Pfam PF00582 Universal stress protein family 162 304 2.7E-29 T 09-03-2017 IPR006016 UspA GO:0006950 NA29_RS10790 ccffbb1c99e0252e601bd01276c00d34 312 Pfam PF00582 Universal stress protein family 1 147 3.8E-27 T 09-03-2017 IPR006016 UspA GO:0006950 NA29_RS10790 ccffbb1c99e0252e601bd01276c00d34 312 SUPERFAMILY SSF52402 163 307 1.34E-32 T 09-03-2017 NA29_RS00925 294b7656f2646c4459ca15e4b5ae0ce8 432 Gene3D G3DSA:3.90.190.10 196 417 8.4E-8 T 09-03-2017 IPR029021 Protein-tyrosine phosphatase-like NA29_RS00925 294b7656f2646c4459ca15e4b5ae0ce8 432 SUPERFAMILY SSF52799 216 417 1.18E-8 T 09-03-2017 IPR029021 Protein-tyrosine phosphatase-like NA29_RS21860 b30f6476151ebc31eef0916dd01ad6c2 244 SUPERFAMILY SSF161098 41 225 6.15E-36 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS21860 b30f6476151ebc31eef0916dd01ad6c2 244 Gene3D G3DSA:1.10.3720.10 17 224 3.1E-27 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS21860 b30f6476151ebc31eef0916dd01ad6c2 244 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 225 2.2E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS00365 f668303c7daa813684ea90b99df57497 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 183 195 4.4E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS00365 f668303c7daa813684ea90b99df57497 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 55 66 4.4E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS00365 f668303c7daa813684ea90b99df57497 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 319 336 4.4E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS00365 f668303c7daa813684ea90b99df57497 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 99 109 4.4E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS00365 f668303c7daa813684ea90b99df57497 373 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 155 166 4.4E-6 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS00365 f668303c7daa813684ea90b99df57497 373 Pfam PF13609 Gram-negative porin 12 339 8.8E-45 T 09-03-2017 NA29_RS00365 f668303c7daa813684ea90b99df57497 373 Gene3D G3DSA:2.40.160.10 25 373 5.5E-91 T 09-03-2017 IPR023614 Porin domain NA29_RS00365 f668303c7daa813684ea90b99df57497 373 PRINTS PR00184 Neisseria sp. porin signature 184 201 5.9E-12 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS00365 f668303c7daa813684ea90b99df57497 373 PRINTS PR00184 Neisseria sp. porin signature 57 82 5.9E-12 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS00365 f668303c7daa813684ea90b99df57497 373 PRINTS PR00184 Neisseria sp. porin signature 316 340 5.9E-12 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS00365 f668303c7daa813684ea90b99df57497 373 PRINTS PR00184 Neisseria sp. porin signature 154 171 5.9E-12 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS00365 f668303c7daa813684ea90b99df57497 373 SUPERFAMILY SSF56935 25 212 1.19E-79 T 09-03-2017 NA29_RS00365 f668303c7daa813684ea90b99df57497 373 SUPERFAMILY SSF56935 240 373 1.19E-79 T 09-03-2017 NA29_RS03330 5cb06ab5eda132e49b5d331e415d275d 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 1.6E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03330 5cb06ab5eda132e49b5d331e415d275d 316 Pfam PF03466 LysR substrate binding domain 93 301 4.9E-28 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS03330 5cb06ab5eda132e49b5d331e415d275d 316 SUPERFAMILY SSF46785 6 106 1.56E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03330 5cb06ab5eda132e49b5d331e415d275d 316 SUPERFAMILY SSF53850 96 304 1.67E-32 T 09-03-2017 NA29_RS03330 5cb06ab5eda132e49b5d331e415d275d 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 6.3E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03330 5cb06ab5eda132e49b5d331e415d275d 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 6.3E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03330 5cb06ab5eda132e49b5d331e415d275d 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 6.3E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03330 5cb06ab5eda132e49b5d331e415d275d 316 Gene3D G3DSA:3.40.190.10 96 183 1.3E-11 T 09-03-2017 NA29_RS03330 5cb06ab5eda132e49b5d331e415d275d 316 Gene3D G3DSA:1.10.10.10 7 93 8.6E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03330 5cb06ab5eda132e49b5d331e415d275d 316 Gene3D G3DSA:3.40.190.10 184 269 5.7E-12 T 09-03-2017 NA29_RS24630 dab5445d7124b1f17b9420bd238acda8 517 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 6.6E-106 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NA29_RS24630 dab5445d7124b1f17b9420bd238acda8 517 Pfam PF00474 Sodium:solute symporter family 35 437 3.3E-117 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NA29_RS24630 dab5445d7124b1f17b9420bd238acda8 517 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 490 8.0E-210 T 09-03-2017 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 NA29_RS24630 dab5445d7124b1f17b9420bd238acda8 517 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 09-03-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 NA29_RS24630 dab5445d7124b1f17b9420bd238acda8 517 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 09-03-2017 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 NA29_RS17760 86b6787baec7985982154d8e2c554d45 273 Pfam PF00378 Enoyl-CoA hydratase/isomerase 24 270 5.8E-53 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS17760 86b6787baec7985982154d8e2c554d45 273 SUPERFAMILY SSF52096 25 270 3.15E-74 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS17760 86b6787baec7985982154d8e2c554d45 273 Gene3D G3DSA:1.10.12.10 217 270 1.3E-14 T 09-03-2017 IPR014748 Crontonase, C-terminal NA29_RS17760 86b6787baec7985982154d8e2c554d45 273 Gene3D G3DSA:3.90.226.10 24 210 3.8E-58 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS07285 5030b29a51cc6f9417c96da4e824e933 275 Gene3D G3DSA:3.20.20.20 11 273 8.9E-110 T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS07285 5030b29a51cc6f9417c96da4e824e933 275 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 50 63 - T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS07285 5030b29a51cc6f9417c96da4e824e933 275 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 270 8.5E-98 T 09-03-2017 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 NA29_RS07285 5030b29a51cc6f9417c96da4e824e933 275 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 16 31 - T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS07285 5030b29a51cc6f9417c96da4e824e933 275 Pfam PF00809 Pterin binding enzyme 17 256 1.6E-83 T 09-03-2017 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS07285 5030b29a51cc6f9417c96da4e824e933 275 SUPERFAMILY SSF51717 4 273 4.97E-100 T 09-03-2017 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 NA29_RS22415 f1505d8e6fed99e749162b58a476df2f 155 Pfam PF05258 Protein of unknown function (DUF721) 25 98 3.1E-7 T 09-03-2017 IPR007922 Protein of unknown function DUF721/UPF0232 NA29_RS24355 809833bf8fd316b01d135b064bbe7617 113 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 25 94 8.5E-15 T 09-03-2017 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 NA29_RS18710 4d4e0a592daf5bd317886df9581b882d 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 2.1E-5 T 09-03-2017 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 NA29_RS18710 4d4e0a592daf5bd317886df9581b882d 187 Gene3D G3DSA:3.40.30.10 4 182 1.0E-64 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS18710 4d4e0a592daf5bd317886df9581b882d 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 3.1E-104 T 09-03-2017 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS18710 4d4e0a592daf5bd317886df9581b882d 187 SUPERFAMILY SSF52833 1 186 8.46E-60 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS18710 4d4e0a592daf5bd317886df9581b882d 187 PIRSF PIRSF000239 1 187 1.6E-57 T 09-03-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 NA29_RS18710 4d4e0a592daf5bd317886df9581b882d 187 Pfam PF00578 AhpC/TSA family 5 132 1.1E-34 T 09-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 NA29_RS08180 edd34a07fbe2602a4c629177c7eef52e 485 Pfam PF03972 MmgE/PrpD family 20 467 1.2E-160 T 09-03-2017 IPR005656 MmgE/PrpD GO:0016829 NA29_RS08180 edd34a07fbe2602a4c629177c7eef52e 485 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 16 485 3.9E-254 T 09-03-2017 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 NA29_RS08180 edd34a07fbe2602a4c629177c7eef52e 485 SUPERFAMILY SSF103378 15 484 6.28E-160 T 09-03-2017 IPR005656 MmgE/PrpD GO:0016829 NA29_RS08180 edd34a07fbe2602a4c629177c7eef52e 485 Gene3D G3DSA:3.30.1330.120 290 429 1.7E-61 T 09-03-2017 NA29_RS09860 de350b385ee8705faff1cac4427fb0b7 332 Pfam PF00482 Type II secretion system (T2SS), protein F 189 316 1.1E-14 T 09-03-2017 IPR018076 Type II secretion system F domain NA29_RS08835 65982cb8522f3231bd6db945a12537c8 279 Pfam PF00561 alpha/beta hydrolase fold 37 260 4.2E-20 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS08835 65982cb8522f3231bd6db945a12537c8 279 Gene3D G3DSA:3.40.50.1820 13 273 1.5E-50 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS08835 65982cb8522f3231bd6db945a12537c8 279 SUPERFAMILY SSF53474 13 272 1.28E-47 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS12465 f819e1b4d090fe044b06a0c2581e6604 431 Pfam PF13657 HipA N-terminal domain 18 123 3.8E-19 T 09-03-2017 IPR017508 HipA, N-terminal subdomain 1 NA29_RS12465 f819e1b4d090fe044b06a0c2581e6604 431 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 20 123 2.9E-11 T 09-03-2017 IPR017508 HipA, N-terminal subdomain 1 NA29_RS12465 f819e1b4d090fe044b06a0c2581e6604 431 Pfam PF07805 HipA-like N-terminal domain 162 250 7.4E-15 T 09-03-2017 IPR012894 HipA, N-terminal subdomain 2 NA29_RS12465 f819e1b4d090fe044b06a0c2581e6604 431 Pfam PF07804 HipA-like C-terminal domain 256 408 4.0E-27 T 09-03-2017 IPR012893 HipA-like, C-terminal NA29_RS02035 1178f30ba001dfa177868a0958956bfa 225 Gene3D G3DSA:3.40.50.720 1 225 1.5E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS02035 1178f30ba001dfa177868a0958956bfa 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.9E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS02035 1178f30ba001dfa177868a0958956bfa 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.9E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS02035 1178f30ba001dfa177868a0958956bfa 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 1.9E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS02035 1178f30ba001dfa177868a0958956bfa 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 1.9E-13 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS02035 1178f30ba001dfa177868a0958956bfa 225 Pfam PF00106 short chain dehydrogenase 2 184 2.1E-28 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS02035 1178f30ba001dfa177868a0958956bfa 225 SUPERFAMILY SSF51735 1 225 1.39E-61 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS01725 fd9b0b9d9a3f6eec286144c022044564 442 SUPERFAMILY SSF103473 8 436 6.02E-76 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS01725 fd9b0b9d9a3f6eec286144c022044564 442 Pfam PF07690 Major Facilitator Superfamily 25 400 6.6E-44 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS01725 fd9b0b9d9a3f6eec286144c022044564 442 Gene3D G3DSA:1.20.1250.20 256 434 7.0E-22 T 09-03-2017 NA29_RS01725 fd9b0b9d9a3f6eec286144c022044564 442 Gene3D G3DSA:1.20.1250.20 15 217 5.3E-39 T 09-03-2017 NA29_RS17005 059d6e03f3f13f169bcf37e91a1be0fa 145 Pfam PF13673 Acetyltransferase (GNAT) domain 39 134 3.8E-14 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS17005 059d6e03f3f13f169bcf37e91a1be0fa 145 SUPERFAMILY SSF55729 10 134 1.03E-22 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS17005 059d6e03f3f13f169bcf37e91a1be0fa 145 Gene3D G3DSA:3.40.630.30 9 143 4.2E-24 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS07950 5c908d11ef58b65715eccfeadad01bd5 90 Pfam PF02609 Exonuclease VII small subunit 22 72 2.9E-19 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 NA29_RS07950 5c908d11ef58b65715eccfeadad01bd5 90 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 21 75 3.2E-20 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 NA29_RS07950 5c908d11ef58b65715eccfeadad01bd5 90 PIRSF PIRSF006488 5 90 2.2E-24 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 NA29_RS07950 5c908d11ef58b65715eccfeadad01bd5 90 Gene3D G3DSA:1.10.287.1040 20 84 4.6E-23 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 NA29_RS07950 5c908d11ef58b65715eccfeadad01bd5 90 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 21 61 2.0E-4 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 NA29_RS07950 5c908d11ef58b65715eccfeadad01bd5 90 SUPERFAMILY SSF116842 20 83 2.09E-19 T 09-03-2017 NA29_RS07950 5c908d11ef58b65715eccfeadad01bd5 90 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 21 81 14.435 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 NA29_RS05795 da3f07557eee2e307dcba64a44c2e3bc 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 9.6E-9 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS05795 da3f07557eee2e307dcba64a44c2e3bc 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 43 58 9.6E-9 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS05795 da3f07557eee2e307dcba64a44c2e3bc 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 230 9.6E-9 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS05795 da3f07557eee2e307dcba64a44c2e3bc 273 PRINTS PR00412 Epoxide hydrolase signature 93 106 6.8E-11 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS05795 da3f07557eee2e307dcba64a44c2e3bc 273 PRINTS PR00412 Epoxide hydrolase signature 214 230 6.8E-11 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS05795 da3f07557eee2e307dcba64a44c2e3bc 273 PRINTS PR00412 Epoxide hydrolase signature 43 58 6.8E-11 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS05795 da3f07557eee2e307dcba64a44c2e3bc 273 PRINTS PR00412 Epoxide hydrolase signature 247 269 6.8E-11 T 09-03-2017 IPR000639 Epoxide hydrolase-like GO:0003824 NA29_RS05795 da3f07557eee2e307dcba64a44c2e3bc 273 SUPERFAMILY SSF53474 8 271 3.78E-57 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS05795 da3f07557eee2e307dcba64a44c2e3bc 273 Pfam PF12697 Alpha/beta hydrolase family 19 262 5.8E-27 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS05795 da3f07557eee2e307dcba64a44c2e3bc 273 Gene3D G3DSA:3.40.50.1820 8 271 3.1E-58 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS14705 93311cab668c3637980cefd0db620988 385 SUPERFAMILY SSF51679 1 353 2.36E-95 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS14705 93311cab668c3637980cefd0db620988 385 Pfam PF00296 Luciferase-like monooxygenase 1 327 2.4E-86 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS14705 93311cab668c3637980cefd0db620988 385 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 2 384 69.17 T 09-03-2017 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 NA29_RS14705 93311cab668c3637980cefd0db620988 385 Gene3D G3DSA:3.20.20.30 289 355 8.6E-102 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS14705 93311cab668c3637980cefd0db620988 385 Gene3D G3DSA:3.20.20.30 1 255 8.6E-102 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS14705 93311cab668c3637980cefd0db620988 385 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 351 6.6E-187 T 09-03-2017 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 NA29_RS02230 437ec2a5283a3dc3ea5cfb90fe86c854 373 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 155 368 4.0E-66 T 09-03-2017 IPR003453 ABC transport permease subunit MlaE, Proteobacteria NA29_RS02230 437ec2a5283a3dc3ea5cfb90fe86c854 373 Pfam PF02405 Permease MlaE 157 365 1.0E-66 T 09-03-2017 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 NA29_RS07600 3b37af96f03a000941af18c04e3cc1e1 357 Gene3D G3DSA:1.10.1530.10 9 81 1.4E-18 T 09-03-2017 NA29_RS07600 3b37af96f03a000941af18c04e3cc1e1 357 Gene3D G3DSA:3.30.1370.60 82 279 5.5E-71 T 09-03-2017 NA29_RS07600 3b37af96f03a000941af18c04e3cc1e1 357 SUPERFAMILY SSF89733 8 347 2.22E-93 T 09-03-2017 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS07600 3b37af96f03a000941af18c04e3cc1e1 357 Pfam PF02615 Malate/L-lactate dehydrogenase 11 336 5.3E-101 T 09-03-2017 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS07055 3a6bf2ad15b8cf3f4700aa9f24f91338 148 Hamap MF_00042 Ribonuclease H [rnhA]. 3 148 33.576 T 09-03-2017 IPR022892 Ribonuclease H GO:0004523 NA29_RS07055 3a6bf2ad15b8cf3f4700aa9f24f91338 148 SUPERFAMILY SSF53098 5 143 7.33E-59 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS07055 3a6bf2ad15b8cf3f4700aa9f24f91338 148 Gene3D G3DSA:3.30.420.10 5 144 2.7E-62 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS07055 3a6bf2ad15b8cf3f4700aa9f24f91338 148 Pfam PF00075 RNase H 5 142 1.1E-51 T 09-03-2017 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 NA29_RS04200 62bf04b4744468dd18d0dda980654e01 358 Gene3D G3DSA:2.40.160.10 40 358 5.0E-70 T 09-03-2017 IPR023614 Porin domain NA29_RS04200 62bf04b4744468dd18d0dda980654e01 358 Pfam PF13609 Gram-negative porin 26 329 9.8E-42 T 09-03-2017 NA29_RS04200 62bf04b4744468dd18d0dda980654e01 358 SUPERFAMILY SSF56935 40 358 2.44E-57 T 09-03-2017 NA29_RS18050 9e4abcb93957fce1460a038a41d6cc61 564 Pfam PF00263 Bacterial type II and III secretion system protein 305 437 1.0E-21 T 09-03-2017 IPR004846 Type II/III secretion system GO:0009306 NA29_RS18050 9e4abcb93957fce1460a038a41d6cc61 564 PRINTS PR01032 Gene IV protein signature 395 423 1.8E-6 T 09-03-2017 NA29_RS18050 9e4abcb93957fce1460a038a41d6cc61 564 PRINTS PR01032 Gene IV protein signature 326 349 1.8E-6 T 09-03-2017 NA29_RS08195 0a1997477b77c4eeac8b4cc9cd73fee1 297 SUPERFAMILY SSF53850 90 294 2.17E-40 T 09-03-2017 NA29_RS08195 0a1997477b77c4eeac8b4cc9cd73fee1 297 Pfam PF03466 LysR substrate binding domain 89 291 2.0E-37 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS08195 0a1997477b77c4eeac8b4cc9cd73fee1 297 Gene3D G3DSA:3.40.190.10 92 191 7.3E-24 T 09-03-2017 NA29_RS08195 0a1997477b77c4eeac8b4cc9cd73fee1 297 SUPERFAMILY SSF46785 4 112 5.45E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08195 0a1997477b77c4eeac8b4cc9cd73fee1 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.7E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS08195 0a1997477b77c4eeac8b4cc9cd73fee1 297 Gene3D G3DSA:1.10.10.10 3 83 4.1E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03160 71773988db673ee8a888f237d83eccf9 157 Gene3D G3DSA:1.10.10.10 1 51 8.5E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03160 71773988db673ee8a888f237d83eccf9 157 SUPERFAMILY SSF54909 63 152 4.83E-14 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS03160 71773988db673ee8a888f237d83eccf9 157 Pfam PF01037 Lrp/AsnC ligand binding domain 70 142 1.7E-14 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS03160 71773988db673ee8a888f237d83eccf9 157 Pfam PF13404 AsnC-type helix-turn-helix domain 3 43 1.4E-11 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS03160 71773988db673ee8a888f237d83eccf9 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 09-03-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NA29_RS03160 71773988db673ee8a888f237d83eccf9 157 SMART SM00344 3 112 1.2E-26 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NA29_RS03160 71773988db673ee8a888f237d83eccf9 157 SUPERFAMILY SSF46785 2 63 3.23E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03160 71773988db673ee8a888f237d83eccf9 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 7.6E-6 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS03160 71773988db673ee8a888f237d83eccf9 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 7.6E-6 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS03160 71773988db673ee8a888f237d83eccf9 157 Gene3D G3DSA:3.30.70.920 55 152 7.2E-21 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS17635 c88078ba180b47029e0ca51397fe1d9d 275 Hamap MF_01805 Segregation and condensation protein A [scpA]. 42 272 21.012 T 09-03-2017 IPR003768 Segregation and condensation protein A NA29_RS17635 c88078ba180b47029e0ca51397fe1d9d 275 Pfam PF02616 Segregation and condensation protein ScpA 59 270 1.2E-32 T 09-03-2017 IPR003768 Segregation and condensation protein A NA29_RS04875 a84dfdf7d739c14e9ff596988caa547e 201 Gene3D G3DSA:3.20.20.70 5 200 7.0E-40 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS04875 a84dfdf7d739c14e9ff596988caa547e 201 Pfam PF02581 Thiamine monophosphate synthase/TENI 12 196 2.8E-34 T 09-03-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 NA29_RS04875 a84dfdf7d739c14e9ff596988caa547e 201 SUPERFAMILY SSF51391 2 200 1.1E-41 T 09-03-2017 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 NA29_RS09535 16c2cc9727dc8f1cfa6f1ba4c67d1f76 161 Pfam PF06073 Bacterial protein of unknown function (DUF934) 54 141 7.3E-23 T 09-03-2017 IPR008318 Uncharacterised conserved protein UCP030820 NA29_RS17625 03e363b868eb0fcadefff277238f68d8 579 Pfam PF07244 Surface antigen variable number repeat 198 268 1.4E-6 T 09-03-2017 IPR010827 Surface antigen variable number GO:0019867 NA29_RS17625 03e363b868eb0fcadefff277238f68d8 579 Gene3D G3DSA:2.40.160.50 295 568 9.8E-13 T 09-03-2017 NA29_RS17625 03e363b868eb0fcadefff277238f68d8 579 Pfam PF01103 Surface antigen 295 565 1.8E-30 T 09-03-2017 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 NA29_RS06110 c3be37d2bfdba229b7420b4c71795e03 126 Pfam PF08818 Domain of unknown function (DU1801) 28 121 1.6E-20 T 09-03-2017 IPR014922 Domain of unknown function DUF1801 NA29_RS06110 c3be37d2bfdba229b7420b4c71795e03 126 SUPERFAMILY SSF159888 19 125 9.16E-20 T 09-03-2017 NA29_RS13360 9f3818ce75981e216efbf999f982da2f 371 Pfam PF08907 Domain of unknown function (DUF1853) 23 334 1.2E-73 T 09-03-2017 IPR015003 Protein of unknown function DUF1853 NA29_RS12825 68fc068fc5b164ffc6e2c26a522d5977 92 Gene3D G3DSA:4.10.520.10 1 91 1.0E-36 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NA29_RS12825 68fc068fc5b164ffc6e2c26a522d5977 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 09-03-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 NA29_RS12825 68fc068fc5b164ffc6e2c26a522d5977 92 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.6E-15 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS12825 68fc068fc5b164ffc6e2c26a522d5977 92 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.6E-15 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS12825 68fc068fc5b164ffc6e2c26a522d5977 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.6E-15 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS12825 68fc068fc5b164ffc6e2c26a522d5977 92 SUPERFAMILY SSF47729 1 90 5.0E-31 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NA29_RS12825 68fc068fc5b164ffc6e2c26a522d5977 92 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.2E-32 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS12825 68fc068fc5b164ffc6e2c26a522d5977 92 SMART SM00411 1 90 1.1E-37 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS08535 117c0fa9d9167a16791f306fe2c74d07 175 SUPERFAMILY SSF88659 94 165 1.1E-14 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08535 117c0fa9d9167a16791f306fe2c74d07 175 Pfam PF04542 Sigma-70 region 2 15 78 3.8E-13 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08535 117c0fa9d9167a16791f306fe2c74d07 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 163 5.0E-27 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08535 117c0fa9d9167a16791f306fe2c74d07 175 Gene3D G3DSA:1.10.1740.10 11 79 1.3E-11 T 09-03-2017 NA29_RS08535 117c0fa9d9167a16791f306fe2c74d07 175 SUPERFAMILY SSF88946 10 93 5.1E-15 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS08535 117c0fa9d9167a16791f306fe2c74d07 175 Gene3D G3DSA:1.10.10.10 114 164 7.2E-11 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08535 117c0fa9d9167a16791f306fe2c74d07 175 Pfam PF08281 Sigma-70, region 4 115 163 7.9E-13 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS18475 bd6fc89e198b2868006a41bbba6909c9 150 Pfam PF01029 NusB family 6 130 2.7E-31 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 NA29_RS18475 bd6fc89e198b2868006a41bbba6909c9 150 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 5 132 2.1E-35 T 09-03-2017 IPR011605 NusB antitermination factor GO:0006353 NA29_RS18475 bd6fc89e198b2868006a41bbba6909c9 150 SUPERFAMILY SSF48013 3 135 5.63E-38 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 NA29_RS18475 bd6fc89e198b2868006a41bbba6909c9 150 Gene3D G3DSA:1.10.940.10 2 138 1.7E-37 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 NA29_RS18475 bd6fc89e198b2868006a41bbba6909c9 150 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 3 134 19.828 T 09-03-2017 IPR011605 NusB antitermination factor GO:0006353 NA29_RS07250 a3f2b6bb7ac42feeb001ee508e0620dd 222 PIRSF PIRSF006324 5 221 1.1E-54 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS07250 a3f2b6bb7ac42feeb001ee508e0620dd 222 Pfam PF01810 LysE type translocator 20 218 1.1E-48 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS24185 b55fcc07823d3355a37e39018f140226 262 Pfam PF12395 Protein of unknown function 155 254 3.4E-24 T 09-03-2017 IPR022123 Protein of unknown function DUF3658 NA29_RS24185 b55fcc07823d3355a37e39018f140226 262 Pfam PF08874 Domain of unknown function (DUF1835) 4 118 7.3E-27 T 09-03-2017 IPR014973 Protein of unknown function DUF1835 NA29_RS00175 98f74927083a70c70ef4e72124aed843 136 Gene3D G3DSA:2.20.25.10 2 44 4.2E-19 T 09-03-2017 NA29_RS00175 98f74927083a70c70ef4e72124aed843 136 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 6 134 5.7E-48 T 09-03-2017 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 NA29_RS00175 98f74927083a70c70ef4e72124aed843 136 Pfam PF02566 OsmC-like protein 39 133 1.1E-16 T 09-03-2017 IPR003718 OsmC/Ohr family NA29_RS00175 98f74927083a70c70ef4e72124aed843 136 Gene3D G3DSA:3.30.300.20 45 135 6.6E-32 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta NA29_RS00175 98f74927083a70c70ef4e72124aed843 136 SUPERFAMILY SSF82784 1 135 4.06E-40 T 09-03-2017 IPR003718 OsmC/Ohr family NA29_RS18265 0f8549f0ffe3320b1fb43f72b543fcd9 358 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 185 197 3.0E-10 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS18265 0f8549f0ffe3320b1fb43f72b543fcd9 358 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 3.0E-10 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS18265 0f8549f0ffe3320b1fb43f72b543fcd9 358 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 304 321 3.0E-10 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS18265 0f8549f0ffe3320b1fb43f72b543fcd9 358 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 158 169 3.0E-10 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS18265 0f8549f0ffe3320b1fb43f72b543fcd9 358 Pfam PF13609 Gram-negative porin 6 329 9.1E-45 T 09-03-2017 NA29_RS18265 0f8549f0ffe3320b1fb43f72b543fcd9 358 SUPERFAMILY SSF56935 21 358 9.46E-71 T 09-03-2017 NA29_RS18265 0f8549f0ffe3320b1fb43f72b543fcd9 358 PRINTS PR00184 Neisseria sp. porin signature 53 78 8.3E-8 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS18265 0f8549f0ffe3320b1fb43f72b543fcd9 358 PRINTS PR00184 Neisseria sp. porin signature 301 325 8.3E-8 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS18265 0f8549f0ffe3320b1fb43f72b543fcd9 358 PRINTS PR00184 Neisseria sp. porin signature 186 203 8.3E-8 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS18265 0f8549f0ffe3320b1fb43f72b543fcd9 358 Gene3D G3DSA:2.40.160.10 21 358 7.0E-84 T 09-03-2017 IPR023614 Porin domain NA29_RS04955 ec26f9b8c4fe205a21ec59db839a3cd6 295 SUPERFAMILY SSF103481 181 284 2.09E-15 T 09-03-2017 NA29_RS04955 ec26f9b8c4fe205a21ec59db839a3cd6 295 SUPERFAMILY SSF103481 26 127 1.44E-17 T 09-03-2017 NA29_RS04955 ec26f9b8c4fe205a21ec59db839a3cd6 295 Pfam PF00892 EamA-like transporter family 144 279 6.8E-20 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS04955 ec26f9b8c4fe205a21ec59db839a3cd6 295 Pfam PF00892 EamA-like transporter family 2 124 2.1E-21 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS09010 ffda8310ba5d7b90fadd3135ee5defcf 120 Gene3D G3DSA:1.25.40.10 6 116 6.6E-13 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS09010 ffda8310ba5d7b90fadd3135ee5defcf 120 SUPERFAMILY SSF48452 7 97 9.11E-14 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS03195 64dfcab1d47d3b22c8a88eff2832e6a2 499 SUPERFAMILY SSF53720 18 485 9.56E-135 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS03195 64dfcab1d47d3b22c8a88eff2832e6a2 499 Pfam PF00171 Aldehyde dehydrogenase family 19 476 1.6E-132 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS03195 64dfcab1d47d3b22c8a88eff2832e6a2 499 Gene3D G3DSA:3.40.309.10 266 444 3.8E-52 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS03195 64dfcab1d47d3b22c8a88eff2832e6a2 499 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS03195 64dfcab1d47d3b22c8a88eff2832e6a2 499 Gene3D G3DSA:3.40.605.10 19 265 9.8E-74 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS25405 5145004fb43436e30d2d838635332e11 69 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 2.0E-17 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor NA29_RS25405 5145004fb43436e30d2d838635332e11 69 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 69 9.3E-23 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor NA29_RS25405 5145004fb43436e30d2d838635332e11 69 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 22.909 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor NA29_RS25405 5145004fb43436e30d2d838635332e11 69 Pfam PF01809 Haemolytic domain 3 68 8.6E-27 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor NA29_RS25405 5145004fb43436e30d2d838635332e11 69 SMART SM01234 1 68 3.9E-40 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor NA29_RS17090 32fac74a4f195a1a2037c519b9bfe66d 482 Pfam PF02667 Short chain fatty acid transporter 19 469 2.8E-87 T 09-03-2017 IPR006160 Short chain fatty acid transporter AtoE NA29_RS23560 7bba007d2966dd7adc10194092f59e5f 388 Pfam PF02581 Thiamine monophosphate synthase/TENI 194 367 1.9E-42 T 09-03-2017 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 NA29_RS23560 7bba007d2966dd7adc10194092f59e5f 388 Gene3D G3DSA:3.20.20.70 179 385 5.0E-53 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS23560 7bba007d2966dd7adc10194092f59e5f 388 SUPERFAMILY SSF51391 179 382 6.54E-51 T 09-03-2017 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 NA29_RS06120 25a5fe942deafb4081c9cbb5ff60317e 213 SUPERFAMILY SSF52540 1 212 1.69E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06120 25a5fe942deafb4081c9cbb5ff60317e 213 Gene3D G3DSA:3.40.50.300 1 212 3.2E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06120 25a5fe942deafb4081c9cbb5ff60317e 213 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS06120 25a5fe942deafb4081c9cbb5ff60317e 213 SMART SM00382 26 210 1.6E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS06120 25a5fe942deafb4081c9cbb5ff60317e 213 Pfam PF00005 ABC transporter 17 161 4.1E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS07685 509b2425bbb99a3eae741e0c7bc15e33 194 Gene3D G3DSA:3.40.50.360 7 174 6.7E-50 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS07685 509b2425bbb99a3eae741e0c7bc15e33 194 SUPERFAMILY SSF52218 7 159 3.88E-36 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS07685 509b2425bbb99a3eae741e0c7bc15e33 194 Pfam PF03358 NADPH-dependent FMN reductase 7 144 5.7E-34 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 NA29_RS10395 648dfa4446a7e253a2dafc72a3cfc69f 424 Gene3D G3DSA:3.30.9.10 276 364 2.2E-15 T 09-03-2017 NA29_RS10395 648dfa4446a7e253a2dafc72a3cfc69f 424 Gene3D G3DSA:3.30.9.10 134 188 2.2E-15 T 09-03-2017 NA29_RS10395 648dfa4446a7e253a2dafc72a3cfc69f 424 SUPERFAMILY SSF54373 276 366 9.81E-16 T 09-03-2017 NA29_RS10395 648dfa4446a7e253a2dafc72a3cfc69f 424 Pfam PF01266 FAD dependent oxidoreductase 2 403 1.2E-65 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS10395 648dfa4446a7e253a2dafc72a3cfc69f 424 SUPERFAMILY SSF51905 1 54 2.07E-53 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS10395 648dfa4446a7e253a2dafc72a3cfc69f 424 SUPERFAMILY SSF51905 107 276 2.07E-53 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS10395 648dfa4446a7e253a2dafc72a3cfc69f 424 SUPERFAMILY SSF51905 366 423 2.07E-53 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS10395 648dfa4446a7e253a2dafc72a3cfc69f 424 Gene3D G3DSA:3.50.50.60 108 130 2.3E-48 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS10395 648dfa4446a7e253a2dafc72a3cfc69f 424 Gene3D G3DSA:3.50.50.60 366 422 2.3E-48 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS10395 648dfa4446a7e253a2dafc72a3cfc69f 424 Gene3D G3DSA:3.50.50.60 189 275 2.3E-48 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS10395 648dfa4446a7e253a2dafc72a3cfc69f 424 Gene3D G3DSA:3.50.50.60 1 58 2.3E-48 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS01275 e308ef75cfab7e86b85344f1da2cdb04 398 Pfam PF00561 alpha/beta hydrolase fold 46 376 1.6E-33 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS01275 e308ef75cfab7e86b85344f1da2cdb04 398 SUPERFAMILY SSF53474 7 387 1.01E-98 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS01275 e308ef75cfab7e86b85344f1da2cdb04 398 Gene3D G3DSA:3.40.50.1820 272 382 1.3E-33 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS01275 e308ef75cfab7e86b85344f1da2cdb04 398 Gene3D G3DSA:3.40.50.1820 28 219 1.3E-33 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS01275 e308ef75cfab7e86b85344f1da2cdb04 398 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 17 388 6.7E-138 T 09-03-2017 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 NA29_RS01275 e308ef75cfab7e86b85344f1da2cdb04 398 PIRSF PIRSF000443 1 397 1.2E-139 T 09-03-2017 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 NA29_RS01275 e308ef75cfab7e86b85344f1da2cdb04 398 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 3 391 48.24 T 09-03-2017 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 NA29_RS22050 e0d6a592afb2e31eb3f791d7424b13ff 313 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 252 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS22050 e0d6a592afb2e31eb3f791d7424b13ff 313 Pfam PF12852 Cupin 2 191 7.1E-38 T 09-03-2017 IPR032783 AraC-type transcription regulator, ligand-binding domain NA29_RS22050 e0d6a592afb2e31eb3f791d7424b13ff 313 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 260 302 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS22050 e0d6a592afb2e31eb3f791d7424b13ff 313 Gene3D G3DSA:2.60.120.280 51 83 4.1E-4 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS22050 e0d6a592afb2e31eb3f791d7424b13ff 313 SMART SM00342 223 306 6.2E-29 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS22050 e0d6a592afb2e31eb3f791d7424b13ff 313 SUPERFAMILY SSF46689 260 308 2.55E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS22050 e0d6a592afb2e31eb3f791d7424b13ff 313 Gene3D G3DSA:1.10.10.60 205 260 6.3E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS22050 e0d6a592afb2e31eb3f791d7424b13ff 313 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 290 2.6E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS22050 e0d6a592afb2e31eb3f791d7424b13ff 313 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 290 306 2.6E-6 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 NA29_RS22050 e0d6a592afb2e31eb3f791d7424b13ff 313 SUPERFAMILY SSF46689 206 257 5.92E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS22050 e0d6a592afb2e31eb3f791d7424b13ff 313 Gene3D G3DSA:1.10.10.60 261 307 7.4E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS22050 e0d6a592afb2e31eb3f791d7424b13ff 313 Pfam PF12833 Helix-turn-helix domain 229 307 1.5E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS25005 5360f22f30d2547cc9449ed49eddd1fc 544 SMART SM01049 33 129 9.8E-37 T 09-03-2017 IPR033480 Single Cache domain 2 NA29_RS25005 5360f22f30d2547cc9449ed49eddd1fc 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 514 2.8E-61 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS25005 5360f22f30d2547cc9449ed49eddd1fc 544 Gene3D G3DSA:1.10.287.950 283 487 3.5E-61 T 09-03-2017 NA29_RS25005 5360f22f30d2547cc9449ed49eddd1fc 544 Pfam PF17200 Single Cache domain 2 36 187 7.3E-40 T 09-03-2017 IPR033480 Single Cache domain 2 NA29_RS25005 5360f22f30d2547cc9449ed49eddd1fc 544 SMART SM00283 268 515 3.2E-90 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS25005 5360f22f30d2547cc9449ed49eddd1fc 544 SUPERFAMILY SSF58104 246 516 4.97E-69 T 09-03-2017 NA29_RS25005 5360f22f30d2547cc9449ed49eddd1fc 544 Gene3D G3DSA:3.30.450.20 21 182 9.2E-45 T 09-03-2017 NA29_RS11010 b6346163cc0016a370eacd407a564775 427 ProSitePatterns PS00216 Sugar transport proteins signature 1. 288 305 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS11010 b6346163cc0016a370eacd407a564775 427 Gene3D G3DSA:1.20.1250.20 4 215 2.0E-22 T 09-03-2017 NA29_RS11010 b6346163cc0016a370eacd407a564775 427 Gene3D G3DSA:1.20.1250.20 231 418 5.7E-21 T 09-03-2017 NA29_RS11010 b6346163cc0016a370eacd407a564775 427 SUPERFAMILY SSF103473 2 422 3.92E-64 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS11010 b6346163cc0016a370eacd407a564775 427 Pfam PF07690 Major Facilitator Superfamily 239 411 2.7E-13 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS11010 b6346163cc0016a370eacd407a564775 427 Pfam PF00083 Sugar (and other) transporter 9 213 2.5E-21 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS19870 c773962fd3de79b409e220a4eddc3f1e 323 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 15 294 1.3E-101 T 09-03-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 NA29_RS19870 c773962fd3de79b409e220a4eddc3f1e 323 Pfam PF02401 LytB protein 16 292 1.8E-92 T 09-03-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 NA29_RS19870 c773962fd3de79b409e220a4eddc3f1e 323 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 14 296 38.385 T 09-03-2017 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 NA29_RS08260 2db78c74ab21e20086cc12d7e51f47ed 188 Gene3D G3DSA:3.30.1130.10 61 186 7.4E-54 T 09-03-2017 NA29_RS08260 2db78c74ab21e20086cc12d7e51f47ed 188 Gene3D G3DSA:1.10.286.10 11 54 3.5E-18 T 09-03-2017 NA29_RS08260 2db78c74ab21e20086cc12d7e51f47ed 188 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 3 186 35.114 T 09-03-2017 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 NA29_RS08260 2db78c74ab21e20086cc12d7e51f47ed 188 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 65 81 - T 09-03-2017 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 NA29_RS08260 2db78c74ab21e20086cc12d7e51f47ed 188 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 11 186 2.2E-62 T 09-03-2017 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 NA29_RS08260 2db78c74ab21e20086cc12d7e51f47ed 188 SUPERFAMILY SSF55620 9 186 2.37E-68 T 09-03-2017 NA29_RS08260 2db78c74ab21e20086cc12d7e51f47ed 188 Pfam PF01227 GTP cyclohydrolase I 9 185 1.1E-69 T 09-03-2017 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 NA29_RS08260 2db78c74ab21e20086cc12d7e51f47ed 188 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 113 123 - T 09-03-2017 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 NA29_RS15590 61ce7b447a1e893bdb06e26c916b423d 372 Gene3D G3DSA:3.30.1540.10 264 339 1.9E-16 T 09-03-2017 NA29_RS15590 61ce7b447a1e893bdb06e26c916b423d 372 SUPERFAMILY SSF89796 34 365 6.28E-95 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS15590 61ce7b447a1e893bdb06e26c916b423d 372 Pfam PF02515 CoA-transferase family III 36 365 3.4E-83 T 09-03-2017 IPR003673 CoA-transferase family III GO:0003824 NA29_RS15590 61ce7b447a1e893bdb06e26c916b423d 372 Gene3D G3DSA:3.40.50.10540 31 249 3.7E-79 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS15590 61ce7b447a1e893bdb06e26c916b423d 372 Gene3D G3DSA:3.40.50.10540 340 365 3.7E-79 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS04380 196dc58ff6a0e3c2d288b6a8fe2094c2 145 SUPERFAMILY SSF54197 1 132 8.51E-36 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 NA29_RS04380 196dc58ff6a0e3c2d288b6a8fe2094c2 145 Gene3D G3DSA:3.30.428.10 1 141 1.5E-39 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 NA29_RS04380 196dc58ff6a0e3c2d288b6a8fe2094c2 145 Pfam PF01230 HIT domain 12 97 4.2E-13 T 09-03-2017 IPR001310 Histidine triad (HIT) protein NA29_RS04380 196dc58ff6a0e3c2d288b6a8fe2094c2 145 PIRSF PIRSF000714 1 140 7.1E-39 T 09-03-2017 IPR026026 Histidine triad hydrolase, Hint-type NA29_RS11410 4d38e00425061749158de3b7bda2aab8 255 Pfam PF00005 ABC transporter 17 157 8.2E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS11410 4d38e00425061749158de3b7bda2aab8 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS11410 4d38e00425061749158de3b7bda2aab8 255 Gene3D G3DSA:3.40.50.300 1 215 2.1E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11410 4d38e00425061749158de3b7bda2aab8 255 SMART SM00382 26 207 3.3E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS11410 4d38e00425061749158de3b7bda2aab8 255 SUPERFAMILY SSF52540 1 225 2.1E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20790 9b9d48a3ee19182b4cd5519370df31ca 229 SUPERFAMILY SSF55729 106 222 2.49E-20 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS20790 9b9d48a3ee19182b4cd5519370df31ca 229 Gene3D G3DSA:3.40.630.30 133 221 1.7E-18 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS20790 9b9d48a3ee19182b4cd5519370df31ca 229 Pfam PF08445 FR47-like protein 137 219 9.1E-21 T 09-03-2017 IPR013653 FR47-like GO:0016747 NA29_RS00855 986a68156f86685eef318b68f5671b24 214 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 189 201 - T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS00855 986a68156f86685eef318b68f5671b24 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 186 211 1.2E-66 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS00855 986a68156f86685eef318b68f5671b24 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 141 161 1.2E-66 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS00855 986a68156f86685eef318b68f5671b24 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 162 183 1.2E-66 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS00855 986a68156f86685eef318b68f5671b24 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 27 47 1.2E-66 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS00855 986a68156f86685eef318b68f5671b24 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 8 27 1.2E-66 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS00855 986a68156f86685eef318b68f5671b24 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 47 66 1.2E-66 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS00855 986a68156f86685eef318b68f5671b24 214 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 8 208 2.0E-77 T 09-03-2017 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 NA29_RS00855 986a68156f86685eef318b68f5671b24 214 Pfam PF00813 FliP family 11 208 1.4E-60 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS24175 007c3bfe022b268042f085a714f42ec8 202 Pfam PF01883 Domain of unknown function DUF59 38 100 2.0E-8 T 09-03-2017 IPR002744 Domain of unknown function DUF59 NA29_RS24175 007c3bfe022b268042f085a714f42ec8 202 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 43 201 2.3E-56 T 09-03-2017 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit NA29_RS24175 007c3bfe022b268042f085a714f42ec8 202 SUPERFAMILY SSF117916 36 131 8.17E-19 T 09-03-2017 NA29_RS03620 a4dae56d8b49539525a95459c484f805 326 SUPERFAMILY SSF53187 12 322 5.45E-52 T 09-03-2017 NA29_RS03620 a4dae56d8b49539525a95459c484f805 326 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 251 2.3E-12 T 09-03-2017 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 NA29_RS03620 a4dae56d8b49539525a95459c484f805 326 Gene3D G3DSA:3.40.630.10 35 210 7.0E-6 T 09-03-2017 NA29_RS22370 5d5b78838a0ad31ae2eebd90c1fbb2e0 408 Pfam PF00482 Type II secretion system (T2SS), protein F 277 399 9.5E-22 T 09-03-2017 IPR018076 Type II secretion system F domain NA29_RS22370 5d5b78838a0ad31ae2eebd90c1fbb2e0 408 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 2.7E-24 T 09-03-2017 IPR018076 Type II secretion system F domain NA29_RS22370 5d5b78838a0ad31ae2eebd90c1fbb2e0 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 09-03-2017 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 NA29_RS22370 5d5b78838a0ad31ae2eebd90c1fbb2e0 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 1.5E-15 T 09-03-2017 IPR003004 GspF/PilC family NA29_RS22370 5d5b78838a0ad31ae2eebd90c1fbb2e0 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 1.5E-15 T 09-03-2017 IPR003004 GspF/PilC family NA29_RS22370 5d5b78838a0ad31ae2eebd90c1fbb2e0 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 1.5E-15 T 09-03-2017 IPR003004 GspF/PilC family NA29_RS22370 5d5b78838a0ad31ae2eebd90c1fbb2e0 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 1.5E-15 T 09-03-2017 IPR003004 GspF/PilC family NA29_RS22530 0c49abbfdbaad9726936f296a156d265 264 Pfam PF11249 Protein of unknown function (DUF3047) 53 251 6.6E-58 T 09-03-2017 IPR021409 Protein of unknown function DUF3047 NA29_RS17580 e9429d4684c0a59edff7d36d555d5159 761 SUPERFAMILY SSF53383 158 613 2.24E-112 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS17580 e9429d4684c0a59edff7d36d555d5159 761 Gene3D G3DSA:3.90.1150.10 470 637 3.4E-67 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS17580 e9429d4684c0a59edff7d36d555d5159 761 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 403 417 - T 09-03-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 NA29_RS17580 e9429d4684c0a59edff7d36d555d5159 761 SUPERFAMILY SSF55904 616 761 2.22E-45 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 NA29_RS17580 e9429d4684c0a59edff7d36d555d5159 761 Gene3D G3DSA:3.40.640.10 158 467 1.0E-109 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS17580 e9429d4684c0a59edff7d36d555d5159 761 Gene3D G3DSA:3.90.100.10 638 760 1.7E-33 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 NA29_RS17580 e9429d4684c0a59edff7d36d555d5159 761 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 621 747 1.9E-46 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 NA29_RS17580 e9429d4684c0a59edff7d36d555d5159 761 PIRSF PIRSF009393 1 761 2.9E-276 T 09-03-2017 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 NA29_RS17580 e9429d4684c0a59edff7d36d555d5159 761 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 158 594 6.3E-151 T 09-03-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 NA29_RS17580 e9429d4684c0a59edff7d36d555d5159 761 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 20 152 1.6E-36 T 09-03-2017 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 NA29_RS14770 d6e03c61f1488ec3fbb30005bf21596a 274 SUPERFAMILY SSF51366 1 246 7.91E-91 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NA29_RS14770 d6e03c61f1488ec3fbb30005bf21596a 274 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 09-03-2017 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 NA29_RS14770 d6e03c61f1488ec3fbb30005bf21596a 274 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 262 1.3E-77 T 09-03-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 NA29_RS14770 d6e03c61f1488ec3fbb30005bf21596a 274 Gene3D G3DSA:3.20.20.70 2 269 2.7E-101 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS14770 d6e03c61f1488ec3fbb30005bf21596a 274 Pfam PF00290 Tryptophan synthase alpha chain 8 263 2.0E-88 T 09-03-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 NA29_RS14770 d6e03c61f1488ec3fbb30005bf21596a 274 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 266 34.588 T 09-03-2017 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 NA29_RS20460 638a6b6360295b83446fd1b6666944df 237 PIRSF PIRSF004848 1 236 7.4E-76 T 09-03-2017 IPR011078 Uncharacterised protein family UPF0001 NA29_RS20460 638a6b6360295b83446fd1b6666944df 237 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 231 1.0E-77 T 09-03-2017 IPR011078 Uncharacterised protein family UPF0001 NA29_RS20460 638a6b6360295b83446fd1b6666944df 237 Pfam PF01168 Alanine racemase, N-terminal domain 10 231 1.3E-34 T 09-03-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 NA29_RS20460 638a6b6360295b83446fd1b6666944df 237 SUPERFAMILY SSF51419 1 229 3.79E-83 T 09-03-2017 IPR029066 PLP-binding barrel NA29_RS20460 638a6b6360295b83446fd1b6666944df 237 Gene3D G3DSA:3.20.20.10 1 234 1.6E-97 T 09-03-2017 IPR029066 PLP-binding barrel NA29_RS20460 638a6b6360295b83446fd1b6666944df 237 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 81 95 - T 09-03-2017 IPR011078 Uncharacterised protein family UPF0001 NA29_RS03505 e3e979d99bfec9d1d893f23642124cde 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 63 1.3E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS03505 e3e979d99bfec9d1d893f23642124cde 214 Gene3D G3DSA:1.10.357.10 71 200 1.7E-32 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS03505 e3e979d99bfec9d1d893f23642124cde 214 Gene3D G3DSA:1.10.10.60 3 69 3.3E-21 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS03505 e3e979d99bfec9d1d893f23642124cde 214 SUPERFAMILY SSF46689 3 87 5.64E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS03505 e3e979d99bfec9d1d893f23642124cde 214 SUPERFAMILY SSF48498 84 198 2.07E-21 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal NA29_RS14545 3861dcfa213a7783832e0f733b4197b9 645 Gene3D G3DSA:1.20.272.10 243 360 5.3E-36 T 09-03-2017 NA29_RS14545 3861dcfa213a7783832e0f733b4197b9 645 SUPERFAMILY SSF48019 244 362 2.89E-27 T 09-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 NA29_RS14545 3861dcfa213a7783832e0f733b4197b9 645 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 526 637 5.3E-10 T 09-03-2017 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS14545 3861dcfa213a7783832e0f733b4197b9 645 Gene3D G3DSA:1.10.8.60 167 242 3.2E-31 T 09-03-2017 NA29_RS14545 3861dcfa213a7783832e0f733b4197b9 645 SUPERFAMILY SSF52540 32 225 2.03E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14545 3861dcfa213a7783832e0f733b4197b9 645 SMART SM00382 37 179 1.3E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS14545 3861dcfa213a7783832e0f733b4197b9 645 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 361 7.9E-24 T 09-03-2017 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 NA29_RS14545 3861dcfa213a7783832e0f733b4197b9 645 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 4.1E-126 T 09-03-2017 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 NA29_RS14545 3861dcfa213a7783832e0f733b4197b9 645 Gene3D G3DSA:3.40.50.300 15 166 3.8E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14545 3861dcfa213a7783832e0f733b4197b9 645 Pfam PF13177 DNA polymerase III, delta subunit 20 178 8.1E-41 T 09-03-2017 NA29_RS14545 3861dcfa213a7783832e0f733b4197b9 645 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 5.0E-5 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 NA29_RS14545 3861dcfa213a7783832e0f733b4197b9 645 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 5.0E-5 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 NA29_RS21125 211dab310382f3928b9f762d3470d37a 449 SMART SM01091 353 431 2.5E-21 T 09-03-2017 IPR005170 Transporter-associated domain NA29_RS21125 211dab310382f3928b9f762d3470d37a 449 SUPERFAMILY SSF54631 213 357 3.29E-21 T 09-03-2017 NA29_RS21125 211dab310382f3928b9f762d3470d37a 449 Pfam PF00571 CBS domain 282 338 1.1E-4 T 09-03-2017 IPR000644 CBS domain NA29_RS21125 211dab310382f3928b9f762d3470d37a 449 Pfam PF00571 CBS domain 218 274 6.5E-5 T 09-03-2017 IPR000644 CBS domain NA29_RS21125 211dab310382f3928b9f762d3470d37a 449 Pfam PF01595 Domain of unknown function DUF21 9 201 9.7E-47 T 09-03-2017 IPR002550 Domain of unknown function DUF21 NA29_RS21125 211dab310382f3928b9f762d3470d37a 449 Pfam PF03471 Transporter associated domain 354 429 6.9E-18 T 09-03-2017 IPR005170 Transporter-associated domain NA29_RS21125 211dab310382f3928b9f762d3470d37a 449 Gene3D G3DSA:3.10.580.10 209 348 2.1E-14 T 09-03-2017 NA29_RS21125 211dab310382f3928b9f762d3470d37a 449 Gene3D G3DSA:3.30.465.10 351 429 5.5E-21 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS21125 211dab310382f3928b9f762d3470d37a 449 SUPERFAMILY SSF56176 351 430 2.73E-17 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS06380 75011920ca5f1921f7235802ed1fdb69 327 Gene3D G3DSA:2.60.40.420 89 251 1.8E-37 T 09-03-2017 IPR008972 Cupredoxin NA29_RS06380 75011920ca5f1921f7235802ed1fdb69 327 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 2 212 8.9E-111 T 09-03-2017 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 NA29_RS06380 75011920ca5f1921f7235802ed1fdb69 327 SUPERFAMILY SSF81464 1 91 5.07E-24 T 09-03-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06380 75011920ca5f1921f7235802ed1fdb69 327 Gene3D G3DSA:1.10.287.90 1 87 1.5E-35 T 09-03-2017 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS06380 75011920ca5f1921f7235802ed1fdb69 327 Pfam PF06481 COX Aromatic Rich Motif 212 255 3.4E-14 T 09-03-2017 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 NA29_RS06380 75011920ca5f1921f7235802ed1fdb69 327 PIRSF PIRSF000292 1 284 1.6E-126 T 09-03-2017 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 NA29_RS06380 75011920ca5f1921f7235802ed1fdb69 327 SUPERFAMILY SSF49503 93 252 1.05E-45 T 09-03-2017 IPR008972 Cupredoxin NA29_RS10755 1ed2cb15d28b33f47d1230b8927fb009 785 Pfam PF03170 Bacterial cellulose synthase subunit 81 691 2.2E-214 T 09-03-2017 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 NA29_RS10755 1ed2cb15d28b33f47d1230b8927fb009 785 PRINTS PR01440 Cellulose synthase subunit B signature 199 220 4.6E-36 T 09-03-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 NA29_RS10755 1ed2cb15d28b33f47d1230b8927fb009 785 PRINTS PR01440 Cellulose synthase subunit B signature 321 342 4.6E-36 T 09-03-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 NA29_RS10755 1ed2cb15d28b33f47d1230b8927fb009 785 PRINTS PR01440 Cellulose synthase subunit B signature 404 425 4.6E-36 T 09-03-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 NA29_RS10755 1ed2cb15d28b33f47d1230b8927fb009 785 PRINTS PR01440 Cellulose synthase subunit B signature 728 748 4.6E-36 T 09-03-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 NA29_RS10755 1ed2cb15d28b33f47d1230b8927fb009 785 PRINTS PR01440 Cellulose synthase subunit B signature 487 506 4.6E-36 T 09-03-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 NA29_RS10755 1ed2cb15d28b33f47d1230b8927fb009 785 PRINTS PR01440 Cellulose synthase subunit B signature 109 130 4.6E-36 T 09-03-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 NA29_RS10755 1ed2cb15d28b33f47d1230b8927fb009 785 PRINTS PR01440 Cellulose synthase subunit B signature 241 264 4.6E-36 T 09-03-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 NA29_RS10755 1ed2cb15d28b33f47d1230b8927fb009 785 PRINTS PR01440 Cellulose synthase subunit B signature 535 554 4.6E-36 T 09-03-2017 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 NA29_RS16200 503394b5e7aece5673a86b6752188981 92 Pfam PF11804 Protein of unknown function (DUF3325) 5 88 3.7E-18 T 09-03-2017 IPR021762 Protein of unknown function DUF3325 NA29_RS24685 b19b67072930e187cc92d32528606323 299 SUPERFAMILY SSF46626 63 164 4.95E-15 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24685 b19b67072930e187cc92d32528606323 299 Gene3D G3DSA:1.10.760.10 221 296 3.7E-32 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24685 b19b67072930e187cc92d32528606323 299 Gene3D G3DSA:1.10.760.10 79 157 9.9E-28 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24685 b19b67072930e187cc92d32528606323 299 SUPERFAMILY SSF46626 219 296 2.87E-19 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24685 b19b67072930e187cc92d32528606323 299 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 79 155 9.0E-15 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24685 b19b67072930e187cc92d32528606323 299 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 219 294 1.6E-16 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS24685 b19b67072930e187cc92d32528606323 299 PRINTS PR00607 Class IE cytochrome C signature 269 281 6.6E-16 T 09-03-2017 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 NA29_RS24685 b19b67072930e187cc92d32528606323 299 PRINTS PR00607 Class IE cytochrome C signature 284 295 6.6E-16 T 09-03-2017 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 NA29_RS24685 b19b67072930e187cc92d32528606323 299 PRINTS PR00607 Class IE cytochrome C signature 241 251 6.6E-16 T 09-03-2017 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 NA29_RS24685 b19b67072930e187cc92d32528606323 299 PRINTS PR00607 Class IE cytochrome C signature 230 241 6.6E-16 T 09-03-2017 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 NA29_RS25100 9a5566c5f881787a8bec31a2ed1d0663 282 Hamap MF_01393 ATP synthase subunit a [atpB]. 15 282 13.524 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 NA29_RS25100 9a5566c5f881787a8bec31a2ed1d0663 282 Gene3D G3DSA:1.20.120.220 92 282 3.5E-45 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 NA29_RS25100 9a5566c5f881787a8bec31a2ed1d0663 282 Pfam PF00119 ATP synthase A chain 41 275 1.8E-50 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 NA29_RS25100 9a5566c5f881787a8bec31a2ed1d0663 282 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 33 277 1.2E-35 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 NA29_RS25100 9a5566c5f881787a8bec31a2ed1d0663 282 ProSitePatterns PS00449 ATP synthase a subunit signature. 205 214 - T 09-03-2017 IPR023011 ATPase, F0 complex, subunit A, active site Reactome: R-HSA-163210 NA29_RS25100 9a5566c5f881787a8bec31a2ed1d0663 282 SUPERFAMILY SSF81336 91 276 1.15E-35 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 NA29_RS00515 2c4d7acca9650479a9be14006932899d 249 Gene3D G3DSA:1.20.1050.10 111 214 3.0E-44 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS00515 2c4d7acca9650479a9be14006932899d 249 Gene3D G3DSA:3.40.30.10 1 110 2.8E-35 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS00515 2c4d7acca9650479a9be14006932899d 249 SUPERFAMILY SSF52833 1 90 1.4E-11 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS00515 2c4d7acca9650479a9be14006932899d 249 SUPERFAMILY SSF47616 94 238 8.42E-19 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS00515 2c4d7acca9650479a9be14006932899d 249 Pfam PF14497 Glutathione S-transferase, C-terminal domain 117 225 3.4E-26 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal NA29_RS25295 7414389bc95cee16b91b21d724c8308d 171 Pfam PF13515 Fusaric acid resistance protein-like 31 154 1.8E-17 T 09-03-2017 NA29_RS10780 ecffcc67fa251e27d49bf69eaabcbad9 546 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 2 541 2.7E-197 T 09-03-2017 IPR017744 Cellulose biosynthesis protein BcsG NA29_RS10780 ecffcc67fa251e27d49bf69eaabcbad9 546 Pfam PF11658 Cellulose biosynthesis protein BcsG 4 539 3.6E-206 T 09-03-2017 IPR017744 Cellulose biosynthesis protein BcsG NA29_RS15600 413bed873c7fc4d71e1237837440bb0d 455 Gene3D G3DSA:3.30.499.10 3 152 2.5E-27 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS15600 413bed873c7fc4d71e1237837440bb0d 455 Gene3D G3DSA:3.40.1060.10 156 263 2.0E-24 T 09-03-2017 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS15600 413bed873c7fc4d71e1237837440bb0d 455 Pfam PF00330 Aconitase family (aconitate hydratase) 9 414 4.4E-85 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS15600 413bed873c7fc4d71e1237837440bb0d 455 SUPERFAMILY SSF53732 4 423 2.22E-99 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS15600 413bed873c7fc4d71e1237837440bb0d 455 Gene3D G3DSA:3.30.499.10 273 423 4.2E-37 T 09-03-2017 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS15600 413bed873c7fc4d71e1237837440bb0d 455 PRINTS PR00415 Aconitase family signature 295 306 1.3E-22 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS15600 413bed873c7fc4d71e1237837440bb0d 455 PRINTS PR00415 Aconitase family signature 107 120 1.3E-22 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS15600 413bed873c7fc4d71e1237837440bb0d 455 PRINTS PR00415 Aconitase family signature 121 136 1.3E-22 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS15600 413bed873c7fc4d71e1237837440bb0d 455 PRINTS PR00415 Aconitase family signature 185 198 1.3E-22 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS15600 413bed873c7fc4d71e1237837440bb0d 455 PRINTS PR00415 Aconitase family signature 199 212 1.3E-22 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS15600 413bed873c7fc4d71e1237837440bb0d 455 PRINTS PR00415 Aconitase family signature 356 369 1.3E-22 T 09-03-2017 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS00660 42b8de767152acb19a900949ecfca666 139 Gene3D G3DSA:3.40.50.1010 1 135 2.7E-18 T 09-03-2017 IPR029060 PIN domain-like NA29_RS00660 42b8de767152acb19a900949ecfca666 139 Pfam PF01850 PIN domain 2 128 2.1E-9 T 09-03-2017 IPR002716 PIN domain NA29_RS00660 42b8de767152acb19a900949ecfca666 139 SUPERFAMILY SSF88723 1 137 5.33E-24 T 09-03-2017 IPR029060 PIN domain-like NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 SUPERFAMILY SSF47323 388 608 9.16E-40 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 9.9E-24 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 9.9E-24 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 9.9E-24 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 PRINTS PR01041 Methionyl-tRNA synthetase signature 386 397 9.9E-24 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 PRINTS PR01041 Methionyl-tRNA synthetase signature 253 264 9.9E-24 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 9.9E-24 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 Gene3D G3DSA:2.40.50.140 589 701 7.8E-40 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 549 39.619 T 09-03-2017 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 Gene3D G3DSA:2.20.28.20 142 173 5.2E-18 T 09-03-2017 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 Pfam PF09334 tRNA synthetases class I (M) 5 398 2.6E-147 T 09-03-2017 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 Gene3D G3DSA:3.40.50.620 4 141 9.4E-85 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 Gene3D G3DSA:3.40.50.620 180 381 9.4E-85 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 Pfam PF01588 Putative tRNA binding domain 600 698 2.2E-22 T 09-03-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 SUPERFAMILY SSF52374 3 138 2.94E-98 T 09-03-2017 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 SUPERFAMILY SSF52374 173 389 2.94E-98 T 09-03-2017 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 SUPERFAMILY SSF57770 139 173 4.71E-12 T 09-03-2017 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 Pfam PF08264 Anticodon-binding domain of tRNA 420 506 6.9E-6 T 09-03-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 537 9.5E-164 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 567 701 2.7E-39 T 09-03-2017 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 SUPERFAMILY SSF50249 590 700 1.42E-27 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS17600 b8e3004f988d791ea7690879848a5d8b 701 Gene3D G3DSA:1.10.730.10 382 538 5.7E-39 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS24940 06750b92f4f3b9e078f473f14888e27f 152 Gene3D G3DSA:1.20.58.300 2 125 6.2E-29 T 09-03-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 NA29_RS24940 06750b92f4f3b9e078f473f14888e27f 152 SUPERFAMILY SSF140566 1 125 1.31E-25 T 09-03-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 NA29_RS24940 06750b92f4f3b9e078f473f14888e27f 152 Pfam PF05130 FlgN protein 1 142 3.6E-32 T 09-03-2017 IPR007809 FlgN-like protein GO:0005515|GO:0044780 NA29_RS12555 2a30f74cb7a1ec5cf1ddd7046635859d 370 SUPERFAMILY SSF47823 36 86 1.69E-12 T 09-03-2017 IPR010998 Integrase, Lambda-type, N-terminal NA29_RS12555 2a30f74cb7a1ec5cf1ddd7046635859d 370 SUPERFAMILY SSF47823 115 163 1.69E-12 T 09-03-2017 IPR010998 Integrase, Lambda-type, N-terminal NA29_RS12555 2a30f74cb7a1ec5cf1ddd7046635859d 370 SUPERFAMILY SSF56349 168 362 2.5E-38 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NA29_RS12555 2a30f74cb7a1ec5cf1ddd7046635859d 370 Gene3D G3DSA:1.10.150.130 37 164 1.4E-20 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal NA29_RS12555 2a30f74cb7a1ec5cf1ddd7046635859d 370 Pfam PF00589 Phage integrase family 173 350 8.0E-15 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS12555 2a30f74cb7a1ec5cf1ddd7046635859d 370 Gene3D G3DSA:1.10.443.10 169 352 5.4E-49 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS11225 dcb0b6cda9fc09fbe09595eb5654bd6f 179 Pfam PF06496 Protein of unknown function (DUF1097) 9 161 9.8E-30 T 09-03-2017 IPR009476 Protein of unknown function DUF1097 NA29_RS17945 e2f78d01446d4f3993b02b6255443617 138 Gene3D G3DSA:3.40.50.10110 2 136 8.1E-40 T 09-03-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 NA29_RS17945 e2f78d01446d4f3993b02b6255443617 138 Pfam PF04364 DNA polymerase III chi subunit, HolC 2 131 1.6E-36 T 09-03-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 NA29_RS17945 e2f78d01446d4f3993b02b6255443617 138 SUPERFAMILY SSF102400 2 136 2.62E-37 T 09-03-2017 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 NA29_RS09025 a97f5da6c3baf410c6495ed8d4b6841f 190 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 18 168 4.1E-32 T 09-03-2017 IPR018639 Domain of unknown function DUF2062 NA29_RS01825 a12c64244e5cd632dc1f7be6691d12ec 500 SUPERFAMILY SSF56954 2 15 5.89E-53 T 09-03-2017 NA29_RS01825 a12c64244e5cd632dc1f7be6691d12ec 500 SUPERFAMILY SSF56954 61 443 5.89E-53 T 09-03-2017 NA29_RS01825 a12c64244e5cd632dc1f7be6691d12ec 500 Gene3D G3DSA:1.20.1600.10 59 444 2.2E-31 T 09-03-2017 NA29_RS01825 a12c64244e5cd632dc1f7be6691d12ec 500 Pfam PF02321 Outer membrane efflux protein 65 237 1.4E-6 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS01825 a12c64244e5cd632dc1f7be6691d12ec 500 Pfam PF02321 Outer membrane efflux protein 263 439 2.6E-9 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS11400 617e0ffe715df6f3902e399562210d25 36 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 1 36 1.5E-8 T 09-03-2017 IPR010538 Di-haem oxidoreductase, putative peroxidase NA29_RS17210 60ea7ede52ecf885972e3b02b28c5597 144 Pfam PF02472 Biopolymer transport protein ExbD/TolR 17 139 1.8E-26 T 09-03-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 NA29_RS21960 5d40295f5de16debcae7e6473dc5c112 133 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 130 1.7E-67 T 09-03-2017 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 NA29_RS21960 5d40295f5de16debcae7e6473dc5c112 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 2.9E-25 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NA29_RS21960 5d40295f5de16debcae7e6473dc5c112 133 Gene3D G3DSA:3.10.180.10 1 126 3.8E-48 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS21960 5d40295f5de16debcae7e6473dc5c112 133 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 09-03-2017 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 NA29_RS21960 5d40295f5de16debcae7e6473dc5c112 133 SUPERFAMILY SSF54593 1 126 3.76E-35 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS23545 bea4e10c899e829c88dfd1fa70e382fb 255 Pfam PF02405 Permease MlaE 41 252 5.6E-76 T 09-03-2017 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 NA29_RS23545 bea4e10c899e829c88dfd1fa70e382fb 255 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 254 1.1E-84 T 09-03-2017 IPR003453 ABC transport permease subunit MlaE, Proteobacteria NA29_RS16225 c1b098899f8039cc89a541568b5f072e 557 Gene3D G3DSA:3.40.50.300 327 545 6.6E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS16225 c1b098899f8039cc89a541568b5f072e 557 Pfam PF00005 ABC transporter 347 482 4.0E-25 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS16225 c1b098899f8039cc89a541568b5f072e 557 SUPERFAMILY SSF90123 4 314 1.44E-30 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NA29_RS16225 c1b098899f8039cc89a541568b5f072e 557 Pfam PF00664 ABC transporter transmembrane region 44 277 7.6E-9 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 NA29_RS16225 c1b098899f8039cc89a541568b5f072e 557 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 7 532 4.3E-139 T 09-03-2017 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 NA29_RS16225 c1b098899f8039cc89a541568b5f072e 557 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS16225 c1b098899f8039cc89a541568b5f072e 557 Gene3D G3DSA:1.20.1560.10 4 307 1.1E-25 T 09-03-2017 NA29_RS16225 c1b098899f8039cc89a541568b5f072e 557 SUPERFAMILY SSF52540 324 540 6.85E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS16225 c1b098899f8039cc89a541568b5f072e 557 SMART SM00382 354 533 5.3E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS05510 433ffb4af00b3ebd494f5cb13768a373 180 Gene3D G3DSA:1.10.10.10 25 177 9.8E-35 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05510 433ffb4af00b3ebd494f5cb13768a373 180 Pfam PF12802 MarR family 65 126 6.5E-11 T 09-03-2017 NA29_RS05510 433ffb4af00b3ebd494f5cb13768a373 180 SMART SM00347 59 162 1.3E-20 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS05510 433ffb4af00b3ebd494f5cb13768a373 180 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 7.7E-8 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS05510 433ffb4af00b3ebd494f5cb13768a373 180 PRINTS PR00598 Bacterial regulatory protein MarR family signature 103 118 7.7E-8 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS05510 433ffb4af00b3ebd494f5cb13768a373 180 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 138 7.7E-8 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS05510 433ffb4af00b3ebd494f5cb13768a373 180 SUPERFAMILY SSF46785 27 177 5.03E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20960 d26805bc95c6bf381a63f5147a90372e 350 SUPERFAMILY SSF53659 4 333 9.46E-106 T 09-03-2017 NA29_RS20960 d26805bc95c6bf381a63f5147a90372e 350 Pfam PF02504 Fatty acid synthesis protein 3 325 1.7E-110 T 09-03-2017 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 NA29_RS20960 d26805bc95c6bf381a63f5147a90372e 350 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 339 156.551 T 09-03-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 NA29_RS20960 d26805bc95c6bf381a63f5147a90372e 350 PIRSF PIRSF002465 1 339 1.1E-130 T 09-03-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 NA29_RS20960 d26805bc95c6bf381a63f5147a90372e 350 Gene3D G3DSA:3.40.718.10 2 333 7.3E-136 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 NA29_RS20960 d26805bc95c6bf381a63f5147a90372e 350 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 5 336 1.5E-114 T 09-03-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 NA29_RS20005 afc6f56dd2374b04e7c66c980d76bd87 371 SUPERFAMILY SSF53756 43 320 4.6E-6 T 09-03-2017 NA29_RS04065 13c3bf7f388d028eda60d320f3a2df3e 166 Gene3D G3DSA:2.30.110.10 3 159 4.0E-45 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS04065 13c3bf7f388d028eda60d320f3a2df3e 166 SMART SM00903 14 160 8.1E-47 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS04065 13c3bf7f388d028eda60d320f3a2df3e 166 SUPERFAMILY SSF50475 10 160 1.28E-41 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS04065 13c3bf7f388d028eda60d320f3a2df3e 166 Pfam PF01613 Flavin reductase like domain 14 160 1.3E-30 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS24240 1e9d8eef9f9c81fac75ec11a998cfeca 265 Pfam PF08241 Methyltransferase domain 59 155 1.7E-25 T 09-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NA29_RS24240 1e9d8eef9f9c81fac75ec11a998cfeca 265 Gene3D G3DSA:3.40.50.150 44 248 5.7E-51 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS24240 1e9d8eef9f9c81fac75ec11a998cfeca 265 SUPERFAMILY SSF53335 28 254 3.87E-48 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS03325 e95e5d8cc4dbe76678af128dd7627a83 345 SUPERFAMILY SSF51182 8 342 2.13E-115 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS03325 e95e5d8cc4dbe76678af128dd7627a83 345 Pfam PF07883 Cupin domain 93 161 5.5E-25 T 09-03-2017 IPR013096 Cupin 2, conserved barrel NA29_RS03325 e95e5d8cc4dbe76678af128dd7627a83 345 Gene3D G3DSA:2.60.120.10 37 198 9.4E-55 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS03325 e95e5d8cc4dbe76678af128dd7627a83 345 Gene3D G3DSA:2.60.120.10 211 343 6.5E-26 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS03325 e95e5d8cc4dbe76678af128dd7627a83 345 TIGRFAM TIGR02272 gentisate_1_2: gentisate 1,2-dioxygenase 9 344 5.1E-177 T 09-03-2017 IPR011960 Gentisate 1,2-dioxygenase NA29_RS09445 9d844d82fcb7abd16a1070954f4bbbf7 190 SMART SM00903 14 156 1.1E-24 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS09445 9d844d82fcb7abd16a1070954f4bbbf7 190 Pfam PF01613 Flavin reductase like domain 19 155 3.9E-20 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS09445 9d844d82fcb7abd16a1070954f4bbbf7 190 SUPERFAMILY SSF50475 7 182 1.03E-41 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS09445 9d844d82fcb7abd16a1070954f4bbbf7 190 Gene3D G3DSA:2.30.110.10 6 183 1.2E-51 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS17235 39575692d0749680400a78822ffea31d 544 Gene3D G3DSA:3.40.710.10 22 339 3.2E-74 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS17235 39575692d0749680400a78822ffea31d 544 Pfam PF00144 Beta-lactamase 14 327 3.4E-60 T 09-03-2017 IPR001466 Beta-lactamase-related NA29_RS17235 39575692d0749680400a78822ffea31d 544 SUPERFAMILY SSF56601 7 339 5.81E-75 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS03500 8725d71b10dc9b4fdc29b171347f2158 243 SUPERFAMILY SSF53850 17 233 1.09E-28 T 09-03-2017 NA29_RS03500 8725d71b10dc9b4fdc29b171347f2158 243 Gene3D G3DSA:3.40.190.10 8 137 8.3E-18 T 09-03-2017 NA29_RS03500 8725d71b10dc9b4fdc29b171347f2158 243 SMART SM00062 16 236 1.7E-21 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS03500 8725d71b10dc9b4fdc29b171347f2158 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 177 8.7E-19 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 Gene3D G3DSA:3.40.50.1370 8 144 8.9E-55 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 Gene3D G3DSA:3.40.50.1370 145 291 3.0E-55 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 7.8E-48 T 09-03-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 154 302 3.7E-48 T 09-03-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 221 231 5.6E-29 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 5.6E-29 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 283 294 5.6E-29 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 5.6E-29 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 5.6E-29 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 305 76.36 T 09-03-2017 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 304 2.2E-109 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 SUPERFAMILY SSF53671 7 304 8.38E-102 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 2.3E-26 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 2.3E-26 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 2.3E-26 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS20140 024f337fd1b3c200ae0e2ca581923e70 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.3E-26 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 NA29_RS10380 5046f77b36135d6d8da7c97031e75f31 230 Gene3D G3DSA:3.40.50.300 6 226 6.8E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10380 5046f77b36135d6d8da7c97031e75f31 230 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS10380 5046f77b36135d6d8da7c97031e75f31 230 SUPERFAMILY SSF52540 7 226 1.14E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10380 5046f77b36135d6d8da7c97031e75f31 230 SMART SM00382 36 225 2.8E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS10380 5046f77b36135d6d8da7c97031e75f31 230 Pfam PF00005 ABC transporter 27 174 1.3E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS24825 f78a453e1753bc39880b4e710abffebe 469 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 36 465 1.1E-197 T 09-03-2017 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS24825 f78a453e1753bc39880b4e710abffebe 469 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 379 388 - T 09-03-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS24825 f78a453e1753bc39880b4e710abffebe 469 SUPERFAMILY SSF52540 124 394 8.4E-96 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24825 f78a453e1753bc39880b4e710abffebe 469 SMART SM00382 189 372 2.5E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS24825 f78a453e1753bc39880b4e710abffebe 469 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 13 468 7.3E-181 T 09-03-2017 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS24825 f78a453e1753bc39880b4e710abffebe 469 Gene3D G3DSA:3.40.50.300 124 389 8.4E-91 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24825 f78a453e1753bc39880b4e710abffebe 469 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 177 388 1.1E-74 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 NA29_RS10370 3f28727ab071fe6dec7ba5f400e7591a 641 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 313 334 - T 09-03-2017 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 NA29_RS10370 3f28727ab071fe6dec7ba5f400e7591a 641 Gene3D G3DSA:3.10.50.40 265 399 3.6E-49 T 09-03-2017 NA29_RS10370 3f28727ab071fe6dec7ba5f400e7591a 641 Pfam PF13624 SurA N-terminal domain 1 166 2.5E-42 T 09-03-2017 NA29_RS10370 3f28727ab071fe6dec7ba5f400e7591a 641 SUPERFAMILY SSF109998 204 249 1.65E-27 T 09-03-2017 IPR027304 Trigger factor/SurA domain NA29_RS10370 3f28727ab071fe6dec7ba5f400e7591a 641 SUPERFAMILY SSF109998 40 170 1.65E-27 T 09-03-2017 IPR027304 Trigger factor/SurA domain NA29_RS10370 3f28727ab071fe6dec7ba5f400e7591a 641 SUPERFAMILY SSF54534 268 378 1.5E-32 T 09-03-2017 NA29_RS10370 3f28727ab071fe6dec7ba5f400e7591a 641 Pfam PF13616 PPIC-type PPIASE domain 267 375 1.9E-30 T 09-03-2017 NA29_RS07420 4e2f738fa4963dfeddc3385fab0c0454 344 SUPERFAMILY SSF144052 140 342 1.96E-11 T 09-03-2017 NA29_RS23225 c0d1eaca6675ff8f69424acd52425d84 149 Pfam PF05069 Phage virion morphogenesis family 5 147 7.6E-42 T 09-03-2017 IPR006522 Phage virion morphogensis protein NA29_RS23225 c0d1eaca6675ff8f69424acd52425d84 149 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 6 147 1.1E-37 T 09-03-2017 IPR006522 Phage virion morphogensis protein NA29_RS01605 ad258117d4ad39390dbb96492f11a132 371 SUPERFAMILY SSF53850 48 350 5.2E-57 T 09-03-2017 NA29_RS01605 ad258117d4ad39390dbb96492f11a132 371 Gene3D G3DSA:3.40.190.10 12 149 5.8E-62 T 09-03-2017 NA29_RS01605 ad258117d4ad39390dbb96492f11a132 371 Gene3D G3DSA:3.40.190.10 292 366 5.8E-62 T 09-03-2017 NA29_RS01605 ad258117d4ad39390dbb96492f11a132 371 Pfam PF13416 Bacterial extracellular solute-binding protein 67 324 9.2E-23 T 09-03-2017 NA29_RS01605 ad258117d4ad39390dbb96492f11a132 371 Gene3D G3DSA:3.40.190.10 150 291 1.7E-60 T 09-03-2017 NA29_RS21175 eef98974df294701af403fd2c702c02e 338 Pfam PF01548 Transposase 7 145 8.2E-17 T 09-03-2017 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 NA29_RS21175 eef98974df294701af403fd2c702c02e 338 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 292 4.7E-25 T 09-03-2017 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 NA29_RS20090 3a4992d30659dd82c978f1b6213284f4 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 26 317 1.8E-69 T 09-03-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 NA29_RS20090 3a4992d30659dd82c978f1b6213284f4 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 20 329 5.7E-101 T 09-03-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 NA29_RS20090 3a4992d30659dd82c978f1b6213284f4 335 SUPERFAMILY SSF52540 53 169 1.2E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20090 3a4992d30659dd82c978f1b6213284f4 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 8 330 38.646 T 09-03-2017 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 NA29_RS20090 3a4992d30659dd82c978f1b6213284f4 335 Gene3D G3DSA:3.40.50.300 52 153 1.2E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08330 4ff8860778cdb8568b241f06c5661971 367 SUPERFAMILY SSF52821 17 53 2.23E-21 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS08330 4ff8860778cdb8568b241f06c5661971 367 SUPERFAMILY SSF52821 80 128 2.23E-21 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS08330 4ff8860778cdb8568b241f06c5661971 367 Gene3D G3DSA:3.40.50.300 142 279 5.0E-4 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08330 4ff8860778cdb8568b241f06c5661971 367 SMART SM00450 4 130 7.7E-10 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS08330 4ff8860778cdb8568b241f06c5661971 367 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 14 317 1.5E-106 T 09-03-2017 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 NA29_RS08330 4ff8860778cdb8568b241f06c5661971 367 Pfam PF00581 Rhodanese-like domain 15 126 7.3E-9 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS08330 4ff8860778cdb8568b241f06c5661971 367 Gene3D G3DSA:3.40.250.10 17 127 4.8E-33 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS08330 4ff8860778cdb8568b241f06c5661971 367 SUPERFAMILY SSF52540 217 303 3.35E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08330 4ff8860778cdb8568b241f06c5661971 367 SUPERFAMILY SSF52540 141 172 3.35E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS11115 1da8001f0b7a71ae71ed6ee4f0aac4fe 334 Pfam PF16220 Domain of unknown function (DUF4880) 17 56 2.6E-13 T 09-03-2017 IPR032623 FecR, N-terminal NA29_RS11115 1da8001f0b7a71ae71ed6ee4f0aac4fe 334 PIRSF PIRSF018266 7 334 2.1E-82 T 09-03-2017 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NA29_RS11115 1da8001f0b7a71ae71ed6ee4f0aac4fe 334 Pfam PF04773 FecR protein 123 217 1.7E-18 T 09-03-2017 IPR006860 FecR protein NA29_RS19410 284a86c59b4c72823150263f4b813187 216 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 12 215 3.2E-74 T 09-03-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 NA29_RS19410 284a86c59b4c72823150263f4b813187 216 Gene3D G3DSA:3.40.50.2020 9 215 2.1E-73 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS19410 284a86c59b4c72823150263f4b813187 216 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 9 215 42.903 T 09-03-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 NA29_RS19410 284a86c59b4c72823150263f4b813187 216 SUPERFAMILY SSF53271 10 213 1.85E-60 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS19410 284a86c59b4c72823150263f4b813187 216 Pfam PF14681 Uracil phosphoribosyltransferase 13 214 8.2E-70 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS24715 2df1b5879bfbe5145bfb6d4f55e03788 304 Pfam PF00072 Response regulator receiver domain 43 151 1.1E-24 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS24715 2df1b5879bfbe5145bfb6d4f55e03788 304 Gene3D G3DSA:1.10.10.10 180 271 2.3E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS24715 2df1b5879bfbe5145bfb6d4f55e03788 304 SMART SM00448 41 151 3.0E-38 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS24715 2df1b5879bfbe5145bfb6d4f55e03788 304 Gene3D G3DSA:3.40.50.2300 40 159 7.1E-38 T 09-03-2017 NA29_RS24715 2df1b5879bfbe5145bfb6d4f55e03788 304 SUPERFAMILY SSF46894 180 271 5.67E-23 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS24715 2df1b5879bfbe5145bfb6d4f55e03788 304 Pfam PF00486 Transcriptional regulatory protein, C terminal 194 270 1.0E-19 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS24715 2df1b5879bfbe5145bfb6d4f55e03788 304 SMART SM00862 194 270 9.2E-22 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 NA29_RS24715 2df1b5879bfbe5145bfb6d4f55e03788 304 SUPERFAMILY SSF52172 36 159 6.12E-39 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS00970 98e55c1df453d16397cd356cd992796f 491 SUPERFAMILY SSF75304 3 488 4.71E-155 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS00970 98e55c1df453d16397cd356cd992796f 491 ProSitePatterns PS00571 Amidases signature. 147 178 - T 09-03-2017 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 NA29_RS00970 98e55c1df453d16397cd356cd992796f 491 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 6 482 93.359 T 09-03-2017 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS00970 98e55c1df453d16397cd356cd992796f 491 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 7 482 1.1E-174 T 09-03-2017 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS00970 98e55c1df453d16397cd356cd992796f 491 Gene3D G3DSA:3.90.1300.10 3 488 8.5E-177 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS00970 98e55c1df453d16397cd356cd992796f 491 Pfam PF01425 Amidase 19 471 5.8E-147 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS16965 f5038d57edcf69b7b049995d1fdc7e2e 123 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 22 95 1.7E-12 T 09-03-2017 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 NA29_RS16965 f5038d57edcf69b7b049995d1fdc7e2e 123 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 17 110 3.9E-28 T 09-03-2017 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 NA29_RS02215 a9eaa63a21428fad5da77559329ae799 283 Pfam PF05036 Sporulation related domain 161 229 9.0E-6 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 NA29_RS02215 a9eaa63a21428fad5da77559329ae799 283 SUPERFAMILY SSF110997 160 229 2.62E-8 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 NA29_RS08680 e9f8a67f58f076880d7698bf2b7ec77a 265 Pfam PF07690 Major Facilitator Superfamily 72 248 1.1E-14 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS08680 e9f8a67f58f076880d7698bf2b7ec77a 265 SUPERFAMILY SSF103473 3 249 6.41E-34 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS08680 e9f8a67f58f076880d7698bf2b7ec77a 265 Gene3D G3DSA:1.20.1250.20 66 250 6.0E-29 T 09-03-2017 NA29_RS06320 d374203905b2b1b11cee9d24855e022e 710 Pfam PF00593 TonB dependent receptor 477 707 8.0E-21 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS06320 d374203905b2b1b11cee9d24855e022e 710 Gene3D G3DSA:2.40.170.20 191 710 1.2E-97 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS06320 d374203905b2b1b11cee9d24855e022e 710 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 77 710 1.2E-91 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NA29_RS06320 d374203905b2b1b11cee9d24855e022e 710 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 176 2.8E-13 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS06320 d374203905b2b1b11cee9d24855e022e 710 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 693 710 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site NA29_RS06320 d374203905b2b1b11cee9d24855e022e 710 Gene3D G3DSA:2.170.130.10 56 187 2.7E-28 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS06320 d374203905b2b1b11cee9d24855e022e 710 SUPERFAMILY SSF56935 68 710 1.53E-107 T 09-03-2017 NA29_RS19385 c63729f0d09bf300b3a82551ddac929d 496 Gene3D G3DSA:3.40.50.880 244 471 1.7E-41 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS19385 c63729f0d09bf300b3a82551ddac929d 496 Pfam PF07722 Peptidase C26 260 468 1.4E-51 T 09-03-2017 IPR011697 Peptidase C26 GO:0006541|GO:0016787 NA29_RS19385 c63729f0d09bf300b3a82551ddac929d 496 SUPERFAMILY SSF52317 295 494 2.07E-36 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS25160 15e157619f323826ff81c60eca7b1469 381 SUPERFAMILY SSF53822 23 379 3.43E-75 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS25160 15e157619f323826ff81c60eca7b1469 381 Gene3D G3DSA:3.40.50.2300 22 216 1.2E-42 T 09-03-2017 NA29_RS25160 15e157619f323826ff81c60eca7b1469 381 Pfam PF13458 Periplasmic binding protein 22 375 3.4E-49 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS23760 5a8eedbac13ca2512b828a72a90eef93 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.009 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23760 5a8eedbac13ca2512b828a72a90eef93 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 1.1E-18 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23760 5a8eedbac13ca2512b828a72a90eef93 38 SUPERFAMILY SSF57840 1 38 4.58E-16 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23760 5a8eedbac13ca2512b828a72a90eef93 38 Pfam PF00444 Ribosomal protein L36 1 38 4.7E-19 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23760 5a8eedbac13ca2512b828a72a90eef93 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23760 5a8eedbac13ca2512b828a72a90eef93 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 38 1.0E-8 T 09-03-2017 NA29_RS05460 dd0e05aa4c7871868aabca9e5b8ba82a 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 200 214 4.4E-11 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS05460 dd0e05aa4c7871868aabca9e5b8ba82a 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 4.4E-11 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS05460 dd0e05aa4c7871868aabca9e5b8ba82a 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 41 56 4.4E-11 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS05460 dd0e05aa4c7871868aabca9e5b8ba82a 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 4.4E-11 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS05460 dd0e05aa4c7871868aabca9e5b8ba82a 271 Pfam PF00561 alpha/beta hydrolase fold 17 241 3.5E-26 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS05460 dd0e05aa4c7871868aabca9e5b8ba82a 271 SUPERFAMILY SSF53474 1 255 6.81E-60 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS05460 dd0e05aa4c7871868aabca9e5b8ba82a 271 Gene3D G3DSA:3.40.50.1820 2 255 3.3E-62 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS24905 a27e92a54d273b7225d64f8138b73236 247 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 126 1.7E-38 T 09-03-2017 IPR020013 Fagellar hook-basal body protein, FlgE/F/G NA29_RS24905 a27e92a54d273b7225d64f8138b73236 247 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 243 3.1E-21 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NA29_RS24905 a27e92a54d273b7225d64f8138b73236 247 SUPERFAMILY SSF117143 80 205 1.15E-14 T 09-03-2017 NA29_RS24905 a27e92a54d273b7225d64f8138b73236 247 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 09-03-2017 IPR019776 Flagellar basal body rod protein, conserved site NA29_RS24905 a27e92a54d273b7225d64f8138b73236 247 Pfam PF00460 Flagella basal body rod protein 5 35 4.0E-9 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 NA29_RS14675 295b9bc1abcc8e526d2723b14f76de74 272 Gene3D G3DSA:3.40.1280.10 18 178 1.4E-26 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NA29_RS14675 295b9bc1abcc8e526d2723b14f76de74 272 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 17 267 7.0E-57 T 09-03-2017 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 NA29_RS14675 295b9bc1abcc8e526d2723b14f76de74 272 Pfam PF00588 SpoU rRNA Methylase family 19 172 1.9E-29 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 NA29_RS14675 295b9bc1abcc8e526d2723b14f76de74 272 PIRSF PIRSF004808 14 271 6.2E-61 T 09-03-2017 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 NA29_RS14675 295b9bc1abcc8e526d2723b14f76de74 272 SUPERFAMILY SSF75217 18 180 2.03E-31 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases NA29_RS14655 eda16b7d433f28f4519f01c327205814 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 6.3E-12 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NA29_RS14655 eda16b7d433f28f4519f01c327205814 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 6.3E-12 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NA29_RS14655 eda16b7d433f28f4519f01c327205814 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 85 6.3E-12 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NA29_RS14655 eda16b7d433f28f4519f01c327205814 195 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 191 5.5E-48 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 NA29_RS14655 eda16b7d433f28f4519f01c327205814 195 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 68 85 - T 09-03-2017 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 NA29_RS14655 eda16b7d433f28f4519f01c327205814 195 SUPERFAMILY SSF50891 30 193 7.16E-58 T 09-03-2017 IPR029000 Cyclophilin-like domain NA29_RS14655 eda16b7d433f28f4519f01c327205814 195 Gene3D G3DSA:2.40.100.10 30 193 2.1E-54 T 09-03-2017 IPR029000 Cyclophilin-like domain NA29_RS01095 b4268f939bfe36b45e03684c870ccec4 359 SUPERFAMILY SSF52540 3 203 4.01E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01095 b4268f939bfe36b45e03684c870ccec4 359 Gene3D G3DSA:3.40.50.300 1 203 1.9E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01095 b4268f939bfe36b45e03684c870ccec4 359 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 3 182 2.2E-54 T 09-03-2017 IPR003495 CobW/HypB/UreG, nucleotide-binding domain NA29_RS01095 b4268f939bfe36b45e03684c870ccec4 359 Gene3D G3DSA:3.30.1220.10 245 358 6.2E-41 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS01095 b4268f939bfe36b45e03684c870ccec4 359 SMART SM00833 264 358 2.1E-14 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS01095 b4268f939bfe36b45e03684c870ccec4 359 SUPERFAMILY SSF90002 264 358 3.14E-24 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS01095 b4268f939bfe36b45e03684c870ccec4 359 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 264 358 3.4E-21 T 09-03-2017 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal NA29_RS21300 9ca9be8fe804fe5678517baca76012b3 551 Pfam PF01384 Phosphate transporter family 254 540 6.1E-43 T 09-03-2017 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 NA29_RS21300 9ca9be8fe804fe5678517baca76012b3 551 Pfam PF01384 Phosphate transporter family 84 236 8.0E-34 T 09-03-2017 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 NA29_RS22820 845ac06d2803f691dd59ee267a32d003 183 SUPERFAMILY SSF54593 29 165 1.01E-23 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS22820 845ac06d2803f691dd59ee267a32d003 183 Gene3D G3DSA:3.10.180.10 25 171 2.1E-25 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS22820 845ac06d2803f691dd59ee267a32d003 183 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 32 156 5.2E-11 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NA29_RS19250 ad75f2309b83988dc8f9ff781f36bff4 297 Pfam PF03466 LysR substrate binding domain 90 290 1.9E-47 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS19250 ad75f2309b83988dc8f9ff781f36bff4 297 SUPERFAMILY SSF46785 3 113 9.05E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19250 ad75f2309b83988dc8f9ff781f36bff4 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.0E-20 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19250 ad75f2309b83988dc8f9ff781f36bff4 297 Gene3D G3DSA:3.40.190.10 92 172 6.7E-20 T 09-03-2017 NA29_RS19250 ad75f2309b83988dc8f9ff781f36bff4 297 Gene3D G3DSA:3.40.190.10 173 263 5.8E-21 T 09-03-2017 NA29_RS19250 ad75f2309b83988dc8f9ff781f36bff4 297 SUPERFAMILY SSF53850 91 292 4.2E-45 T 09-03-2017 NA29_RS19250 ad75f2309b83988dc8f9ff781f36bff4 297 Gene3D G3DSA:1.10.10.10 2 83 7.1E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19250 ad75f2309b83988dc8f9ff781f36bff4 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.1E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19250 ad75f2309b83988dc8f9ff781f36bff4 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.1E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19250 ad75f2309b83988dc8f9ff781f36bff4 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.1E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS25325 eb81fe3f6052440d325bec5dc081458d 371 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 297 2.3E-101 T 09-03-2017 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 NA29_RS25325 eb81fe3f6052440d325bec5dc081458d 371 SUPERFAMILY SSF55931 4 369 4.32E-113 T 09-03-2017 NA29_RS25325 eb81fe3f6052440d325bec5dc081458d 371 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 291 2.4E-58 T 09-03-2017 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 NA29_RS25325 eb81fe3f6052440d325bec5dc081458d 371 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 371 98.157 T 09-03-2017 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 NA29_RS17265 5ace7d5931c4a419f49b36ac332eeef2 200 Pfam PF13560 Helix-turn-helix domain 13 66 1.8E-11 T 09-03-2017 NA29_RS17265 5ace7d5931c4a419f49b36ac332eeef2 200 SMART SM00530 15 70 1.6E-11 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS17265 5ace7d5931c4a419f49b36ac332eeef2 200 SUPERFAMILY SSF51182 90 182 1.09E-20 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS17265 5ace7d5931c4a419f49b36ac332eeef2 200 Gene3D G3DSA:2.60.120.10 110 184 1.4E-11 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS17265 5ace7d5931c4a419f49b36ac332eeef2 200 Gene3D G3DSA:1.10.260.40 11 109 8.7E-18 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS17265 5ace7d5931c4a419f49b36ac332eeef2 200 Pfam PF07883 Cupin domain 133 182 2.4E-11 T 09-03-2017 IPR013096 Cupin 2, conserved barrel NA29_RS17265 5ace7d5931c4a419f49b36ac332eeef2 200 SUPERFAMILY SSF47413 10 76 4.22E-15 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS06535 46809b2a4a8a12133fe8a2051208625c 354 Gene3D G3DSA:2.40.160.10 21 354 1.2E-74 T 09-03-2017 IPR023614 Porin domain NA29_RS06535 46809b2a4a8a12133fe8a2051208625c 354 PRINTS PR00184 Neisseria sp. porin signature 156 173 2.1E-6 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS06535 46809b2a4a8a12133fe8a2051208625c 354 PRINTS PR00184 Neisseria sp. porin signature 292 316 2.1E-6 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS06535 46809b2a4a8a12133fe8a2051208625c 354 PRINTS PR00184 Neisseria sp. porin signature 58 83 2.1E-6 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS06535 46809b2a4a8a12133fe8a2051208625c 354 SUPERFAMILY SSF56935 21 354 5.19E-68 T 09-03-2017 NA29_RS06535 46809b2a4a8a12133fe8a2051208625c 354 Pfam PF13609 Gram-negative porin 7 319 4.0E-43 T 09-03-2017 NA29_RS03515 52fae8e21b34d8b0cd709843960108da 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 9.0E-7 T 09-03-2017 NA29_RS03515 52fae8e21b34d8b0cd709843960108da 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 9.0E-7 T 09-03-2017 NA29_RS03515 52fae8e21b34d8b0cd709843960108da 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 407 426 9.0E-7 T 09-03-2017 NA29_RS03515 52fae8e21b34d8b0cd709843960108da 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 9.0E-7 T 09-03-2017 NA29_RS03515 52fae8e21b34d8b0cd709843960108da 476 Pfam PF07690 Major Facilitator Superfamily 15 416 1.5E-45 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS03515 52fae8e21b34d8b0cd709843960108da 476 Gene3D G3DSA:1.20.1250.20 11 196 1.4E-29 T 09-03-2017 NA29_RS03515 52fae8e21b34d8b0cd709843960108da 476 SUPERFAMILY SSF103473 252 461 6.93E-56 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS03515 52fae8e21b34d8b0cd709843960108da 476 SUPERFAMILY SSF103473 4 198 6.93E-56 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS03515 52fae8e21b34d8b0cd709843960108da 476 Gene3D G3DSA:1.20.1250.20 269 454 4.3E-10 T 09-03-2017 NA29_RS14665 baa68f9b66eed09c4900ccf371d108d6 269 Pfam PF00149 Calcineurin-like phosphoesterase 10 224 2.0E-6 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 NA29_RS14665 baa68f9b66eed09c4900ccf371d108d6 269 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 267 86.274 T 09-03-2017 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 NA29_RS14665 baa68f9b66eed09c4900ccf371d108d6 269 SUPERFAMILY SSF56300 10 243 1.23E-20 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS14665 baa68f9b66eed09c4900ccf371d108d6 269 Gene3D G3DSA:3.60.21.10 10 151 2.7E-14 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS14665 baa68f9b66eed09c4900ccf371d108d6 269 Gene3D G3DSA:3.60.21.10 198 238 2.7E-14 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like NA29_RS21185 5002da206a4173c03114cb5743d8fbc1 339 SUPERFAMILY SSF53474 69 319 4.61E-21 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS21185 5002da206a4173c03114cb5743d8fbc1 339 Gene3D G3DSA:3.40.50.1820 69 320 8.6E-26 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS22695 4d1e66ac25b6a4a67459e4e249858b27 757 Pfam PF00593 TonB dependent receptor 515 755 4.9E-40 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS22695 4d1e66ac25b6a4a67459e4e249858b27 757 Pfam PF07715 TonB-dependent Receptor Plug Domain 86 185 9.0E-20 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS22695 4d1e66ac25b6a4a67459e4e249858b27 757 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 88 756 1.6E-86 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NA29_RS22695 4d1e66ac25b6a4a67459e4e249858b27 757 SUPERFAMILY SSF56935 79 755 2.88E-126 T 09-03-2017 NA29_RS22695 4d1e66ac25b6a4a67459e4e249858b27 757 Gene3D G3DSA:2.170.130.10 72 192 1.1E-28 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS22695 4d1e66ac25b6a4a67459e4e249858b27 757 Gene3D G3DSA:2.40.170.20 200 755 1.7E-142 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS00990 2ba41f41ac795467b943df4dd8b86bf4 383 Gene3D G3DSA:2.40.50.100 64 97 2.4E-18 T 09-03-2017 NA29_RS00990 2ba41f41ac795467b943df4dd8b86bf4 383 Gene3D G3DSA:2.40.50.100 172 203 2.4E-18 T 09-03-2017 NA29_RS00990 2ba41f41ac795467b943df4dd8b86bf4 383 SUPERFAMILY SSF111369 56 287 6.67E-54 T 09-03-2017 NA29_RS00990 2ba41f41ac795467b943df4dd8b86bf4 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 282 7.0E-18 T 09-03-2017 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain NA29_RS00990 2ba41f41ac795467b943df4dd8b86bf4 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 363 2.8E-78 T 09-03-2017 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 NA29_RS04670 ec9b469fb71addca9ec477b20ae10fef 158 SUPERFAMILY SSF55811 4 137 3.52E-24 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS04670 ec9b469fb71addca9ec477b20ae10fef 158 Pfam PF00293 NUDIX domain 7 127 2.3E-12 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 NA29_RS04670 ec9b469fb71addca9ec477b20ae10fef 158 Gene3D G3DSA:3.90.79.10 4 142 3.3E-29 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS00500 83e6572b68f9a90a314a426425306add 832 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 547 1.9E-10 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS00500 83e6572b68f9a90a314a426425306add 832 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 466 1.9E-10 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS00500 83e6572b68f9a90a314a426425306add 832 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 528 1.9E-10 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS00500 83e6572b68f9a90a314a426425306add 832 SUPERFAMILY SSF52172 706 826 9.96E-31 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS00500 83e6572b68f9a90a314a426425306add 832 SMART SM00387 407 550 8.7E-24 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00500 83e6572b68f9a90a314a426425306add 832 Pfam PF01584 CheW-like domain 556 683 3.1E-14 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS00500 83e6572b68f9a90a314a426425306add 832 SUPERFAMILY SSF47226 9 103 4.84E-21 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS00500 83e6572b68f9a90a314a426425306add 832 SMART SM00073 7 104 3.3E-14 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS00500 83e6572b68f9a90a314a426425306add 832 Pfam PF01627 Hpt domain 10 100 1.3E-12 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS00500 83e6572b68f9a90a314a426425306add 832 SMART SM00448 709 823 5.5E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS00500 83e6572b68f9a90a314a426425306add 832 Gene3D G3DSA:3.40.50.2300 708 827 5.7E-32 T 09-03-2017 NA29_RS00500 83e6572b68f9a90a314a426425306add 832 SUPERFAMILY SSF55874 366 548 1.1E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00500 83e6572b68f9a90a314a426425306add 832 Gene3D G3DSA:2.40.50.180 574 636 4.2E-6 T 09-03-2017 NA29_RS00500 83e6572b68f9a90a314a426425306add 832 SUPERFAMILY SSF50341 549 681 4.84E-21 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS00500 83e6572b68f9a90a314a426425306add 832 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 409 549 2.4E-14 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00500 83e6572b68f9a90a314a426425306add 832 Gene3D G3DSA:2.30.30.40 550 571 1.5E-10 T 09-03-2017 NA29_RS00500 83e6572b68f9a90a314a426425306add 832 Gene3D G3DSA:2.30.30.40 637 681 1.5E-10 T 09-03-2017 NA29_RS00500 83e6572b68f9a90a314a426425306add 832 Pfam PF00072 Response regulator receiver domain 712 821 5.4E-24 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS00500 83e6572b68f9a90a314a426425306add 832 Gene3D G3DSA:1.20.120.160 7 144 1.7E-25 T 09-03-2017 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 NA29_RS00500 83e6572b68f9a90a314a426425306add 832 Gene3D G3DSA:3.30.565.10 370 549 2.7E-32 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS00500 83e6572b68f9a90a314a426425306add 832 SMART SM00260 542 681 9.7E-11 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS23390 b9d6ae4f289acce2d1d28261d8d14e37 203 Gene3D G3DSA:3.40.30.10 1 90 4.6E-34 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS23390 b9d6ae4f289acce2d1d28261d8d14e37 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 115 187 2.1E-6 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal NA29_RS23390 b9d6ae4f289acce2d1d28261d8d14e37 203 Gene3D G3DSA:1.20.1050.10 91 194 3.8E-17 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS23390 b9d6ae4f289acce2d1d28261d8d14e37 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 1.2E-17 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS23390 b9d6ae4f289acce2d1d28261d8d14e37 203 SUPERFAMILY SSF47616 80 200 1.71E-21 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS23390 b9d6ae4f289acce2d1d28261d8d14e37 203 SUPERFAMILY SSF52833 1 101 9.42E-28 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS01265 088a668fdf121855c177163a8bf3718b 253 Gene3D G3DSA:3.40.50.1000 21 218 4.6E-21 T 09-03-2017 IPR023214 HAD-like domain NA29_RS01265 088a668fdf121855c177163a8bf3718b 253 Pfam PF13419 Haloacid dehalogenase-like hydrolase 22 204 4.1E-9 T 09-03-2017 IPR023214 HAD-like domain NA29_RS01265 088a668fdf121855c177163a8bf3718b 253 SUPERFAMILY SSF56784 20 241 1.29E-27 T 09-03-2017 IPR023214 HAD-like domain NA29_RS01265 088a668fdf121855c177163a8bf3718b 253 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 95 204 3.7E-10 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS07430 6c124532a9ee41add134932d3a0ee8f9 250 PIRSF PIRSF015736 1 250 2.5E-67 T 09-03-2017 IPR026286 Maleate isomerase/Arylmalonate decarboxylase NA29_RS07430 6c124532a9ee41add134932d3a0ee8f9 250 Hamap MF_00943 Maleate isomerase [maiA]. 5 250 50.236 T 09-03-2017 IPR028615 Maleate isomerase GO:0050076 KEGG: 00650+5.2.1.1|KEGG: 00760+5.2.1.1|MetaCyc: PWY-5033|MetaCyc: PWY-6993|MetaCyc: PWY-7128|MetaCyc: PWY-722 NA29_RS23510 469eccab62ce1718967372bc2c0e6931 79 Pfam PF01722 BolA-like protein 20 75 4.1E-20 T 09-03-2017 IPR002634 BolA protein NA29_RS23510 469eccab62ce1718967372bc2c0e6931 79 SUPERFAMILY SSF82657 1 78 4.19E-28 T 09-03-2017 IPR002634 BolA protein NA29_RS23510 469eccab62ce1718967372bc2c0e6931 79 PIRSF PIRSF003113 1 79 3.8E-24 T 09-03-2017 IPR002634 BolA protein NA29_RS23510 469eccab62ce1718967372bc2c0e6931 79 Gene3D G3DSA:3.30.300.90 2 78 4.2E-29 T 09-03-2017 IPR002634 BolA protein NA29_RS18650 7e784e84386344be440acee0e8c11a05 491 Gene3D G3DSA:3.40.605.10 9 249 1.5E-23 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS18650 7e784e84386344be440acee0e8c11a05 491 SUPERFAMILY SSF53720 31 470 1.7E-65 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS18650 7e784e84386344be440acee0e8c11a05 491 Pfam PF00171 Aldehyde dehydrogenase family 8 291 2.5E-24 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS18650 7e784e84386344be440acee0e8c11a05 491 Gene3D G3DSA:3.40.309.10 344 426 2.2E-18 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS18650 7e784e84386344be440acee0e8c11a05 491 Gene3D G3DSA:3.40.309.10 250 306 2.2E-18 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS05325 93a00c83b9635a20a40f0e7282906fae 238 SUPERFAMILY SSF54292 63 144 3.54E-17 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS05325 93a00c83b9635a20a40f0e7282906fae 238 Gene3D G3DSA:1.10.150.120 142 228 7.1E-24 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS05325 93a00c83b9635a20a40f0e7282906fae 238 SUPERFAMILY SSF47741 156 231 2.88E-21 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS05325 93a00c83b9635a20a40f0e7282906fae 238 Pfam PF01799 [2Fe-2S] binding domain 140 223 6.6E-22 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS05325 93a00c83b9635a20a40f0e7282906fae 238 Gene3D G3DSA:3.10.20.30 63 141 5.2E-20 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS05325 93a00c83b9635a20a40f0e7282906fae 238 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 77 125 9.0E-5 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS11440 334e15ade115d4d93bd1814b05431ce1 459 Pfam PF00324 Amino acid permease 12 451 7.0E-104 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 NA29_RS11440 334e15ade115d4d93bd1814b05431ce1 459 PIRSF PIRSF006060 1 455 4.6E-67 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NA29_RS11440 334e15ade115d4d93bd1814b05431ce1 459 ProSitePatterns PS00218 Amino acid permeases signature. 37 67 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 NA29_RS20330 59b40a019407817aacf83bd844b392b0 342 Pfam PF13379 NMT1-like family 30 269 1.4E-17 T 09-03-2017 NA29_RS20330 59b40a019407817aacf83bd844b392b0 342 SUPERFAMILY SSF53850 34 274 2.68E-25 T 09-03-2017 NA29_RS23815 e1d04b68f0c80a3e1d92cbe374b2c170 102 Gene3D G3DSA:2.30.30.30 3 89 7.6E-19 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 NA29_RS23815 e1d04b68f0c80a3e1d92cbe374b2c170 102 SUPERFAMILY SSF50104 3 98 1.08E-28 T 09-03-2017 IPR008991 Translation protein SH3-like domain NA29_RS23815 e1d04b68f0c80a3e1d92cbe374b2c170 102 SMART SM00739 3 30 1.6E-4 T 09-03-2017 IPR005824 KOW NA29_RS23815 e1d04b68f0c80a3e1d92cbe374b2c170 102 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 99 1.3E-31 T 09-03-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23815 e1d04b68f0c80a3e1d92cbe374b2c170 102 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 99 2.9E-24 T 09-03-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23815 e1d04b68f0c80a3e1d92cbe374b2c170 102 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 94 20.366 T 09-03-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS22395 519836e37334a7ad0d6274edd522b736 144 ProSitePatterns PS00893 Nudix box signature. 49 70 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 NA29_RS22395 519836e37334a7ad0d6274edd522b736 144 Gene3D G3DSA:3.90.79.10 15 128 1.9E-31 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS22395 519836e37334a7ad0d6274edd522b736 144 PRINTS PR00502 NUDIX hydrolase family signature 44 58 1.1E-7 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 NA29_RS22395 519836e37334a7ad0d6274edd522b736 144 PRINTS PR00502 NUDIX hydrolase family signature 58 73 1.1E-7 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 NA29_RS22395 519836e37334a7ad0d6274edd522b736 144 Pfam PF00293 NUDIX domain 17 116 2.9E-17 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 NA29_RS22395 519836e37334a7ad0d6274edd522b736 144 SUPERFAMILY SSF55811 13 130 5.28E-33 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS24620 4d69ed6ac7e00a82ee05e38f149de766 116 SUPERFAMILY SSF46626 52 115 1.06E-11 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS21055 01b3fb6b7ae5e1e8eade227a4a2ad5c2 220 Gene3D G3DSA:3.40.50.10420 50 218 2.8E-43 T 09-03-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain NA29_RS21055 01b3fb6b7ae5e1e8eade227a4a2ad5c2 220 SUPERFAMILY SSF100950 50 218 4.06E-38 T 09-03-2017 NA29_RS21055 01b3fb6b7ae5e1e8eade227a4a2ad5c2 220 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 102 217 8.7E-27 T 09-03-2017 IPR003741 LUD domain NA29_RS06215 a2d5cf29ba994da1c64f70a0dda355e8 424 Pfam PF07804 HipA-like C-terminal domain 297 345 1.7E-8 T 09-03-2017 IPR012893 HipA-like, C-terminal NA29_RS06215 a2d5cf29ba994da1c64f70a0dda355e8 424 Pfam PF07805 HipA-like N-terminal domain 185 256 8.9E-9 T 09-03-2017 IPR012894 HipA, N-terminal subdomain 2 NA29_RS06410 8c41424561d654c2d4ae4cafa674ebb6 208 PIRSF PIRSF006324 1 208 5.9E-57 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS06410 8c41424561d654c2d4ae4cafa674ebb6 208 Pfam PF01810 LysE type translocator 17 206 3.8E-33 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS12185 a13890d437890907028e9a75134f3f42 312 Gene3D G3DSA:3.60.110.10 3 303 5.4E-72 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NA29_RS12185 a13890d437890907028e9a75134f3f42 312 SUPERFAMILY SSF56317 3 304 9.81E-75 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NA29_RS12185 a13890d437890907028e9a75134f3f42 312 Pfam PF00795 Carbon-nitrogen hydrolase 7 283 2.3E-52 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NA29_RS00160 bf560ef7356d49e3f043aec3c70abb11 287 Gene3D G3DSA:3.40.50.150 66 225 1.7E-11 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS00160 bf560ef7356d49e3f043aec3c70abb11 287 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 12 266 4.4E-47 T 09-03-2017 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 NA29_RS00160 bf560ef7356d49e3f043aec3c70abb11 287 Pfam PF04072 Leucine carboxyl methyltransferase 13 190 3.0E-45 T 09-03-2017 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 NA29_RS00160 bf560ef7356d49e3f043aec3c70abb11 287 SUPERFAMILY SSF53335 11 276 1.11E-59 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS07210 9932b15884a69d3639c40180432ff4c8 135 Gene3D G3DSA:3.30.1330.40 5 133 2.5E-35 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS07210 9932b15884a69d3639c40180432ff4c8 135 Pfam PF01042 Endoribonuclease L-PSP 28 132 2.4E-19 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family NA29_RS07210 9932b15884a69d3639c40180432ff4c8 135 SUPERFAMILY SSF55298 4 133 2.67E-30 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS03035 525827f112a8d1c5e07a5ccba78778d3 269 Gene3D G3DSA:3.40.50.150 4 63 1.9E-40 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS03035 525827f112a8d1c5e07a5ccba78778d3 269 Gene3D G3DSA:3.40.50.150 160 269 1.9E-40 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS03035 525827f112a8d1c5e07a5ccba78778d3 269 SUPERFAMILY SSF53335 7 268 3.33E-60 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS03035 525827f112a8d1c5e07a5ccba78778d3 269 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 7.7E-13 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 NA29_RS03035 525827f112a8d1c5e07a5ccba78778d3 269 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 13 29 7.7E-13 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 NA29_RS03035 525827f112a8d1c5e07a5ccba78778d3 269 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 35 49 7.7E-13 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 NA29_RS03035 525827f112a8d1c5e07a5ccba78778d3 269 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 54 67 7.7E-13 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 NA29_RS03035 525827f112a8d1c5e07a5ccba78778d3 269 TIGRFAM TIGR00571 dam: DNA adenine methylase 7 263 4.9E-58 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 NA29_RS03035 525827f112a8d1c5e07a5ccba78778d3 269 Gene3D G3DSA:1.10.1020.10 64 144 1.2E-20 T 09-03-2017 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 NA29_RS03035 525827f112a8d1c5e07a5ccba78778d3 269 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 13 235 4.4E-41 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 NA29_RS03035 525827f112a8d1c5e07a5ccba78778d3 269 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NA29_RS03035 525827f112a8d1c5e07a5ccba78778d3 269 PIRSF PIRSF000398 4 268 5.5E-56 T 09-03-2017 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 NA29_RS17375 a00d6d2a9d1d3b6e3abd3dd1717e2ef4 356 Gene3D G3DSA:2.40.160.10 21 356 1.5E-72 T 09-03-2017 IPR023614 Porin domain NA29_RS17375 a00d6d2a9d1d3b6e3abd3dd1717e2ef4 356 Pfam PF13609 Gram-negative porin 9 329 7.6E-42 T 09-03-2017 NA29_RS17375 a00d6d2a9d1d3b6e3abd3dd1717e2ef4 356 SUPERFAMILY SSF56935 21 356 1.42E-64 T 09-03-2017 NA29_RS09265 386d5d452ad43479753cf64fa676909e 151 Gene3D G3DSA:3.10.580.10 1 127 2.3E-28 T 09-03-2017 NA29_RS09265 386d5d452ad43479753cf64fa676909e 151 Pfam PF00571 CBS domain 72 125 2.3E-9 T 09-03-2017 IPR000644 CBS domain NA29_RS09265 386d5d452ad43479753cf64fa676909e 151 Pfam PF00571 CBS domain 15 59 1.8E-9 T 09-03-2017 IPR000644 CBS domain NA29_RS09265 386d5d452ad43479753cf64fa676909e 151 SMART SM00116 13 60 1.2E-7 T 09-03-2017 IPR000644 CBS domain NA29_RS09265 386d5d452ad43479753cf64fa676909e 151 SMART SM00116 78 125 0.012 T 09-03-2017 IPR000644 CBS domain NA29_RS09265 386d5d452ad43479753cf64fa676909e 151 SUPERFAMILY SSF54631 1 142 1.39E-30 T 09-03-2017 NA29_RS22595 af12f6f13bb8367485932261ab5a5a95 380 Pfam PF06725 3D domain 299 376 1.7E-24 T 09-03-2017 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 NA29_RS22595 af12f6f13bb8367485932261ab5a5a95 380 Pfam PF03562 MltA specific insert domain 68 274 2.0E-67 T 09-03-2017 IPR005300 Lytic transglycosylase MltA GO:0004553 NA29_RS22595 af12f6f13bb8367485932261ab5a5a95 380 Gene3D G3DSA:2.40.40.10 185 379 1.5E-57 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain NA29_RS22595 af12f6f13bb8367485932261ab5a5a95 380 Gene3D G3DSA:2.40.40.10 56 162 2.5E-24 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain NA29_RS22595 af12f6f13bb8367485932261ab5a5a95 380 SUPERFAMILY SSF50685 21 380 2.13E-120 T 09-03-2017 IPR009009 RlpA-like protein, double-psi beta-barrel domain NA29_RS22595 af12f6f13bb8367485932261ab5a5a95 380 SMART SM00925 142 274 1.9E-72 T 09-03-2017 IPR005300 Lytic transglycosylase MltA GO:0004553 NA29_RS09485 eea2fb9d0688a219b9928a261088c227 132 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 32 119 9.8E-23 T 09-03-2017 NA29_RS09485 eea2fb9d0688a219b9928a261088c227 132 SUPERFAMILY SSF54292 34 125 2.22E-17 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS06240 d1ea9089b66d0b12da9c47cee0a78954 141 Pfam PF03459 TOBE domain 3 66 6.6E-15 T 09-03-2017 IPR005116 Transport-associated OB, type 1 NA29_RS06240 d1ea9089b66d0b12da9c47cee0a78954 141 Pfam PF03459 TOBE domain 76 138 2.3E-14 T 09-03-2017 IPR005116 Transport-associated OB, type 1 NA29_RS06240 d1ea9089b66d0b12da9c47cee0a78954 141 SUPERFAMILY SSF50331 74 140 2.92E-18 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS06240 d1ea9089b66d0b12da9c47cee0a78954 141 SUPERFAMILY SSF50331 1 69 4.46E-22 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS06240 d1ea9089b66d0b12da9c47cee0a78954 141 Gene3D G3DSA:2.40.50.100 74 140 1.5E-23 T 09-03-2017 NA29_RS06240 d1ea9089b66d0b12da9c47cee0a78954 141 Gene3D G3DSA:2.40.50.100 1 70 1.2E-29 T 09-03-2017 NA29_RS06240 d1ea9089b66d0b12da9c47cee0a78954 141 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 1 69 2.9E-22 T 09-03-2017 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 NA29_RS06240 d1ea9089b66d0b12da9c47cee0a78954 141 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 74 140 6.7E-17 T 09-03-2017 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 NA29_RS18515 e719976c50025ba3cb97e58e1af1f0fb 217 SUPERFAMILY SSF161098 8 209 3.01E-48 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS18515 e719976c50025ba3cb97e58e1af1f0fb 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 215 3.2E-24 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS18515 e719976c50025ba3cb97e58e1af1f0fb 217 Gene3D G3DSA:1.10.3720.10 7 215 1.4E-45 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS07645 d69d4e815bd132f9206f2439ee287b9d 159 Pfam PF03928 Haem-degrading 7 137 2.4E-26 T 09-03-2017 IPR005624 Haem-degrading NA29_RS07645 d69d4e815bd132f9206f2439ee287b9d 159 SUPERFAMILY SSF143744 4 140 6.02E-34 T 09-03-2017 NA29_RS25170 387c0a87702549d8b4933f9bed8f9227 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 27 302 4.4E-32 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS05970 c2e0c788f9b677a4149bcb34457387e2 486 Gene3D G3DSA:3.90.1300.10 8 478 8.9E-120 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS05970 c2e0c788f9b677a4149bcb34457387e2 486 SUPERFAMILY SSF75304 8 478 1.02E-121 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS05970 c2e0c788f9b677a4149bcb34457387e2 486 Pfam PF01425 Amidase 31 462 8.8E-87 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 NA29_RS01905 77c20babdaa270d786c30d4b60b452a3 143 Gene3D G3DSA:3.10.129.10 5 138 3.0E-28 T 09-03-2017 IPR029069 HotDog domain NA29_RS01905 77c20babdaa270d786c30d4b60b452a3 143 Pfam PF01575 MaoC like domain 12 103 2.6E-12 T 09-03-2017 IPR002539 MaoC-like domain NA29_RS01905 77c20babdaa270d786c30d4b60b452a3 143 SUPERFAMILY SSF54637 6 138 1.73E-26 T 09-03-2017 IPR029069 HotDog domain NA29_RS13045 99eb04ab699a6b6378559ff322fcfb98 304 Gene3D G3DSA:2.40.50.100 151 183 2.1E-16 T 09-03-2017 NA29_RS13045 99eb04ab699a6b6378559ff322fcfb98 304 Gene3D G3DSA:2.40.50.100 44 78 2.1E-16 T 09-03-2017 NA29_RS13045 99eb04ab699a6b6378559ff322fcfb98 304 Pfam PF13437 HlyD family secretion protein 154 237 9.2E-5 T 09-03-2017 NA29_RS13045 99eb04ab699a6b6378559ff322fcfb98 304 SUPERFAMILY SSF111369 42 179 6.8E-20 T 09-03-2017 NA29_RS13045 99eb04ab699a6b6378559ff322fcfb98 304 Pfam PF13533 Biotin-lipoyl like 44 92 4.4E-17 T 09-03-2017 NA29_RS19245 6ebe514e69d582f2e6459eeffba5d77a 255 SMART SM00421 190 247 5.3E-17 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS19245 6ebe514e69d582f2e6459eeffba5d77a 255 SUPERFAMILY SSF46894 173 254 1.46E-18 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 NA29_RS19245 6ebe514e69d582f2e6459eeffba5d77a 255 ProSitePatterns PS00622 LuxR-type HTH domain signature. 207 234 - T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS19245 6ebe514e69d582f2e6459eeffba5d77a 255 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 223 7.0E-8 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS19245 6ebe514e69d582f2e6459eeffba5d77a 255 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 207 7.0E-8 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS19245 6ebe514e69d582f2e6459eeffba5d77a 255 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 223 235 7.0E-8 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS19245 6ebe514e69d582f2e6459eeffba5d77a 255 SUPERFAMILY SSF75516 8 180 4.05E-32 T 09-03-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain NA29_RS19245 6ebe514e69d582f2e6459eeffba5d77a 255 Gene3D G3DSA:3.30.450.80 11 194 1.3E-32 T 09-03-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain NA29_RS19245 6ebe514e69d582f2e6459eeffba5d77a 255 Pfam PF00196 Bacterial regulatory proteins, luxR family 193 246 2.1E-16 T 09-03-2017 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 NA29_RS19245 6ebe514e69d582f2e6459eeffba5d77a 255 Pfam PF03472 Autoinducer binding domain 19 176 3.6E-26 T 09-03-2017 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain NA29_RS19245 6ebe514e69d582f2e6459eeffba5d77a 255 Gene3D G3DSA:1.10.10.10 195 253 2.3E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS22690 3a784fbd13915abc81b1615cd3add2f5 290 Gene3D G3DSA:3.40.470.10 58 288 4.9E-84 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 NA29_RS22690 3a784fbd13915abc81b1615cd3add2f5 290 SUPERFAMILY SSF52141 64 288 3.71E-76 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 NA29_RS22690 3a784fbd13915abc81b1615cd3add2f5 290 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 66 281 2.4E-69 T 09-03-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 NA29_RS22690 3a784fbd13915abc81b1615cd3add2f5 290 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 65 287 36.614 T 09-03-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 NA29_RS22690 3a784fbd13915abc81b1615cd3add2f5 290 Pfam PF03167 Uracil DNA glycosylase superfamily 112 275 5.5E-17 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 NA29_RS22690 3a784fbd13915abc81b1615cd3add2f5 290 SMART SM00987 108 276 7.0E-29 T 09-03-2017 NA29_RS22690 3a784fbd13915abc81b1615cd3add2f5 290 SMART SM00986 108 276 7.0E-29 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 NA29_RS22690 3a784fbd13915abc81b1615cd3add2f5 290 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 116 125 - T 09-03-2017 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 NA29_RS15750 48ff68fe5560507ed43f3d16049596e2 362 Pfam PF04055 Radical SAM superfamily 75 252 6.4E-15 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 NA29_RS15750 48ff68fe5560507ed43f3d16049596e2 362 Gene3D G3DSA:3.20.20.70 74 260 9.3E-10 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS15750 48ff68fe5560507ed43f3d16049596e2 362 SUPERFAMILY SSF102114 65 264 2.49E-14 T 09-03-2017 NA29_RS15750 48ff68fe5560507ed43f3d16049596e2 362 SMART SM00729 71 296 6.3E-7 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NA29_RS06700 4a1de32ef5e14c234543a3ac6088ec1d 219 Pfam PF07209 Protein of unknown function (DUF1415) 24 191 4.3E-72 T 09-03-2017 IPR009858 Protein of unknown function DUF1415 NA29_RS21450 336050786617adeeb8a1c6514a96c1f9 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 115 201 1.9E-13 T 09-03-2017 IPR004046 Glutathione S-transferase, C-terminal NA29_RS21450 336050786617adeeb8a1c6514a96c1f9 222 SUPERFAMILY SSF47616 82 208 4.32E-32 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS21450 336050786617adeeb8a1c6514a96c1f9 222 Gene3D G3DSA:3.40.30.10 5 87 9.5E-28 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS21450 336050786617adeeb8a1c6514a96c1f9 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 84 1.6E-16 T 09-03-2017 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 NA29_RS21450 336050786617adeeb8a1c6514a96c1f9 222 Gene3D G3DSA:1.20.1050.10 88 205 6.8E-37 T 09-03-2017 IPR010987 Glutathione S-transferase, C-terminal-like NA29_RS21450 336050786617adeeb8a1c6514a96c1f9 222 SUPERFAMILY SSF52833 5 88 5.28E-22 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS18410 915d47ed8b6c6a03caa13238a2d5253b 253 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 89 252 8.0E-11 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS18410 915d47ed8b6c6a03caa13238a2d5253b 253 SUPERFAMILY SSF56529 3 253 2.49E-64 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS18410 915d47ed8b6c6a03caa13238a2d5253b 253 Gene3D G3DSA:3.90.850.10 3 253 2.1E-70 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS01230 fe7a0db89e92b7e36949c61c31d76526 251 SUPERFAMILY SSF102588 15 249 9.16E-46 T 09-03-2017 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 NA29_RS01230 fe7a0db89e92b7e36949c61c31d76526 251 Gene3D G3DSA:3.40.50.10320 15 249 4.2E-46 T 09-03-2017 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 NA29_RS01230 fe7a0db89e92b7e36949c61c31d76526 251 Pfam PF02585 GlcNAc-PI de-N-acetylase 15 144 4.6E-21 T 09-03-2017 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 NA29_RS08625 10bfdca7447b1c96e6f7a626fc440df4 113 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 28 105 1.9E-21 T 09-03-2017 IPR025528 BrnA antitoxin of type II toxin-antitoxin system NA29_RS23415 2755673e428bef33a257a01a9bcd4625 249 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 9 236 5.2E-54 T 09-03-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 NA29_RS23415 2755673e428bef33a257a01a9bcd4625 249 Gene3D G3DSA:3.40.1390.30 1 107 4.1E-36 T 09-03-2017 NA29_RS23415 2755673e428bef33a257a01a9bcd4625 249 Gene3D G3DSA:3.40.1390.30 108 216 1.9E-28 T 09-03-2017 NA29_RS23415 2755673e428bef33a257a01a9bcd4625 249 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 248 3.0E-58 T 09-03-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 NA29_RS23415 2755673e428bef33a257a01a9bcd4625 249 SUPERFAMILY SSF102705 1 248 1.31E-76 T 09-03-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 NA29_RS20095 46a59b42868dc8b960d6f1a2decf901e 68 SUPERFAMILY SSF158997 2 52 4.05E-21 T 09-03-2017 NA29_RS20095 46a59b42868dc8b960d6f1a2decf901e 68 Gene3D G3DSA:2.20.25.10 8 53 8.1E-27 T 09-03-2017 NA29_RS20095 46a59b42868dc8b960d6f1a2decf901e 68 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 26.638 T 09-03-2017 IPR005651 Uncharacterised protein family UPF0434/Trm112 NA29_RS20095 46a59b42868dc8b960d6f1a2decf901e 68 Pfam PF03966 Trm112p-like protein 2 41 2.8E-12 T 09-03-2017 IPR005651 Uncharacterised protein family UPF0434/Trm112 NA29_RS21520 6d49d38f289803a71fafb3814772513f 402 Pfam PF07690 Major Facilitator Superfamily 15 330 9.9E-35 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS21520 6d49d38f289803a71fafb3814772513f 402 SUPERFAMILY SSF103473 8 388 7.98E-47 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS21520 6d49d38f289803a71fafb3814772513f 402 Gene3D G3DSA:1.20.1250.20 9 192 1.3E-23 T 09-03-2017 NA29_RS21520 6d49d38f289803a71fafb3814772513f 402 Gene3D G3DSA:1.20.1250.20 211 390 3.6E-12 T 09-03-2017 NA29_RS04135 44c0ae8ad524f60bd85f2ba725606b5d 517 PIRSF PIRSF006060 5 498 7.6E-83 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NA29_RS04135 44c0ae8ad524f60bd85f2ba725606b5d 517 ProSitePatterns PS00218 Amino acid permeases signature. 59 90 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 NA29_RS04135 44c0ae8ad524f60bd85f2ba725606b5d 517 Pfam PF00324 Amino acid permease 34 483 1.8E-136 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 NA29_RS18985 a0fee4555137a80853e440c9498921d8 222 Pfam PF00557 Metallopeptidase family M24 19 180 1.4E-15 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS18985 a0fee4555137a80853e440c9498921d8 222 Gene3D G3DSA:3.90.230.10 14 175 2.3E-13 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS18985 a0fee4555137a80853e440c9498921d8 222 SUPERFAMILY SSF55920 14 221 1.57E-26 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS18495 d2ff348c6bb779401f3ad0ac1c419881 502 Gene3D G3DSA:3.40.309.10 291 473 1.7E-67 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS18495 d2ff348c6bb779401f3ad0ac1c419881 502 Gene3D G3DSA:3.40.605.10 29 290 9.3E-100 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS18495 d2ff348c6bb779401f3ad0ac1c419881 502 Pfam PF00171 Aldehyde dehydrogenase family 39 496 5.4E-169 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS18495 d2ff348c6bb779401f3ad0ac1c419881 502 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 275 282 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS18495 d2ff348c6bb779401f3ad0ac1c419881 502 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 303 314 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS18495 d2ff348c6bb779401f3ad0ac1c419881 502 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 50 495 1.8E-211 T 09-03-2017 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 NA29_RS18495 d2ff348c6bb779401f3ad0ac1c419881 502 SUPERFAMILY SSF53720 26 499 1.26E-168 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS16830 1b4531ec0a4d2d6a5ab973e6c1665349 214 SUPERFAMILY SSF46785 70 165 1.41E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16830 1b4531ec0a4d2d6a5ab973e6c1665349 214 Gene3D G3DSA:1.10.10.10 61 162 1.6E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS16830 1b4531ec0a4d2d6a5ab973e6c1665349 214 Pfam PF03551 Transcriptional regulator PadR-like family 74 146 2.3E-22 T 09-03-2017 IPR005149 Transcription regulator PadR, N-terminal NA29_RS13090 b475dd5e72a465ce06e4e67d10d21d87 608 SUPERFAMILY SSF103515 312 608 7.45E-40 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS13090 b475dd5e72a465ce06e4e67d10d21d87 608 SMART SM00869 335 598 1.4E-23 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS13090 b475dd5e72a465ce06e4e67d10d21d87 608 Pfam PF03797 Autotransporter beta-domain 335 588 1.8E-31 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS13090 b475dd5e72a465ce06e4e67d10d21d87 608 Gene3D G3DSA:2.40.128.130 334 606 3.2E-35 T 09-03-2017 IPR005546 Autotransporter beta-domain NA29_RS04700 302adcb115fe929f3a1991374d0aeaab 125 Pfam PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI 40 125 1.4E-13 T 09-03-2017 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 NA29_RS04700 302adcb115fe929f3a1991374d0aeaab 125 TIGRFAM TIGR02497 yscI_hrpB_dom: type III secretion apparatus protein, YscI/HrpB, C-terminal domain 87 125 1.0E-7 T 09-03-2017 IPR012670 Type III secretion system, YscI/HrpB GO:0009306 NA29_RS17170 2f03729392aa97675ee7c553c5477944 233 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 5.7E-53 T 09-03-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS17170 2f03729392aa97675ee7c553c5477944 233 Gene3D G3DSA:3.40.50.1860 1 113 3.6E-37 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS17170 2f03729392aa97675ee7c553c5477944 233 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 193 203 - T 09-03-2017 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS17170 2f03729392aa97675ee7c553c5477944 233 SUPERFAMILY SSF53681 1 113 7.41E-33 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS17170 2f03729392aa97675ee7c553c5477944 233 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 231 5.9E-61 T 09-03-2017 IPR004380 Aspartate racemase GO:0006520|GO:0016855 NA29_RS17170 2f03729392aa97675ee7c553c5477944 233 SUPERFAMILY SSF53681 119 229 6.54E-30 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS17170 2f03729392aa97675ee7c553c5477944 233 Gene3D G3DSA:3.40.50.1860 114 216 9.6E-31 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 NA29_RS16755 206abdc5aae8ee9e46ad43e85eeb3a33 209 Gene3D G3DSA:3.30.1150.10 88 182 1.8E-8 T 09-03-2017 NA29_RS16755 206abdc5aae8ee9e46ad43e85eeb3a33 209 SUPERFAMILY SSF74653 90 173 1.96E-8 T 09-03-2017 NA29_RS03570 61e8d3c37a8875f572cafb1698d553f4 341 SUPERFAMILY SSF46785 21 102 6.05E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03570 61e8d3c37a8875f572cafb1698d553f4 341 Gene3D G3DSA:3.40.190.10 290 317 3.7E-24 T 09-03-2017 NA29_RS03570 61e8d3c37a8875f572cafb1698d553f4 341 Gene3D G3DSA:3.40.190.10 107 189 3.7E-24 T 09-03-2017 NA29_RS03570 61e8d3c37a8875f572cafb1698d553f4 341 Gene3D G3DSA:3.40.190.10 190 286 4.1E-23 T 09-03-2017 NA29_RS03570 61e8d3c37a8875f572cafb1698d553f4 341 Gene3D G3DSA:1.10.10.10 17 103 7.1E-30 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS03570 61e8d3c37a8875f572cafb1698d553f4 341 SUPERFAMILY SSF53850 107 313 1.99E-36 T 09-03-2017 NA29_RS03570 61e8d3c37a8875f572cafb1698d553f4 341 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.2E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03570 61e8d3c37a8875f572cafb1698d553f4 341 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.2E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03570 61e8d3c37a8875f572cafb1698d553f4 341 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03570 61e8d3c37a8875f572cafb1698d553f4 341 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.1E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS03570 61e8d3c37a8875f572cafb1698d553f4 341 Pfam PF03466 LysR substrate binding domain 114 313 9.3E-18 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS18835 6c24cf6471d81edf082d24f0a023d940 302 SUPERFAMILY SSF51556 9 290 1.13E-64 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS18835 6c24cf6471d81edf082d24f0a023d940 302 Gene3D G3DSA:3.20.20.140 9 292 2.9E-62 T 09-03-2017 NA29_RS18835 6c24cf6471d81edf082d24f0a023d940 302 Pfam PF04909 Amidohydrolase 9 290 3.3E-50 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 NA29_RS18260 c356f7d04932ed2d4a1d72f328bede27 257 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS18260 c356f7d04932ed2d4a1d72f328bede27 257 Gene3D G3DSA:3.40.50.300 1 221 3.8E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18260 c356f7d04932ed2d4a1d72f328bede27 257 Pfam PF00005 ABC transporter 23 161 2.4E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS18260 c356f7d04932ed2d4a1d72f328bede27 257 SMART SM00382 31 212 9.6E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS18260 c356f7d04932ed2d4a1d72f328bede27 257 SUPERFAMILY SSF52540 1 233 8.91E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS17030 2d1fd131783c086c3e7ef055072aa834 275 SMART SM00342 184 266 4.3E-14 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS17030 2d1fd131783c086c3e7ef055072aa834 275 SUPERFAMILY SSF46689 171 217 4.3E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS17030 2d1fd131783c086c3e7ef055072aa834 275 Pfam PF02311 AraC-like ligand binding domain 22 148 2.1E-21 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS17030 2d1fd131783c086c3e7ef055072aa834 275 SUPERFAMILY SSF46689 221 266 5.38E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS17030 2d1fd131783c086c3e7ef055072aa834 275 Pfam PF12833 Helix-turn-helix domain 192 267 4.3E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS17030 2d1fd131783c086c3e7ef055072aa834 275 Gene3D G3DSA:2.60.120.280 20 135 5.2E-12 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS17030 2d1fd131783c086c3e7ef055072aa834 275 SUPERFAMILY SSF51215 26 135 6.28E-19 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 NA29_RS17030 2d1fd131783c086c3e7ef055072aa834 275 Gene3D G3DSA:1.10.10.60 170 221 1.2E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS17030 2d1fd131783c086c3e7ef055072aa834 275 Gene3D G3DSA:1.10.10.60 222 265 1.5E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS19460 ad5213e6af2e5b53381a314659a81445 443 SUPERFAMILY SSF53850 27 432 1.66E-75 T 09-03-2017 NA29_RS19460 ad5213e6af2e5b53381a314659a81445 443 Gene3D G3DSA:3.40.190.10 151 351 9.4E-42 T 09-03-2017 NA29_RS19460 ad5213e6af2e5b53381a314659a81445 443 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 146 163 - T 09-03-2017 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 NA29_RS19460 ad5213e6af2e5b53381a314659a81445 443 Pfam PF13416 Bacterial extracellular solute-binding protein 48 375 1.0E-37 T 09-03-2017 NA29_RS22760 fa1ec62d83910812c47738ca72b9f461 444 Pfam PF00939 Sodium:sulfate symporter transmembrane region 14 438 2.4E-26 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 NA29_RS24820 86ac82f95bc2899dceb57fcdb69dd66a 219 Pfam PF02108 Flagellar assembly protein FliH 86 209 9.1E-35 T 09-03-2017 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE NA29_RS24820 86ac82f95bc2899dceb57fcdb69dd66a 219 PRINTS PR01003 Flagellar assembly protein FliH signature 11 30 6.1E-9 T 09-03-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 NA29_RS24820 86ac82f95bc2899dceb57fcdb69dd66a 219 PRINTS PR01003 Flagellar assembly protein FliH signature 191 216 6.1E-9 T 09-03-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 NA29_RS24820 86ac82f95bc2899dceb57fcdb69dd66a 219 PRINTS PR01003 Flagellar assembly protein FliH signature 174 190 6.1E-9 T 09-03-2017 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 NA29_RS01190 d76c120a33c8628c2704c59c5e806720 284 Gene3D G3DSA:3.40.830.10 2 280 1.9E-105 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS01190 d76c120a33c8628c2704c59c5e806720 284 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 270 5.6E-77 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS01190 d76c120a33c8628c2704c59c5e806720 284 SUPERFAMILY SSF53213 2 277 4.71E-90 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS16910 b028ea3792c32c3968f5f781537fc094 331 Gene3D G3DSA:3.40.50.720 3 320 5.1E-70 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16910 b028ea3792c32c3968f5f781537fc094 331 SUPERFAMILY SSF51735 294 326 3.85E-72 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16910 b028ea3792c32c3968f5f781537fc094 331 SUPERFAMILY SSF51735 2 266 3.85E-72 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16910 b028ea3792c32c3968f5f781537fc094 331 TIGRFAM TIGR03466 HpnA: hopanoid-associated sugar epimerase 4 329 6.2E-150 T 09-03-2017 IPR017829 Hopanoid-associated sugar epimerase KEGG: 00040+1.1.1.21|KEGG: 00051+1.1.1.21|KEGG: 00052+1.1.1.21|KEGG: 00561+1.1.1.21|KEGG: 00941+1.1.1.219|MetaCyc: PWY-5152|MetaCyc: PWY-5515|MetaCyc: PWY-6693 NA29_RS16910 b028ea3792c32c3968f5f781537fc094 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 232 2.8E-40 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NA29_RS03875 597fbeead4264d843056b36aca670bba 328 SUPERFAMILY SSF52540 49 280 3.02E-32 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS03875 597fbeead4264d843056b36aca670bba 328 Pfam PF07728 AAA domain (dynein-related subfamily) 63 188 3.0E-10 T 09-03-2017 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 NA29_RS03875 597fbeead4264d843056b36aca670bba 328 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 4 36 1.1E-17 T 09-03-2017 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 NA29_RS03875 597fbeead4264d843056b36aca670bba 328 Gene3D G3DSA:3.40.50.300 52 225 1.7E-25 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14420 0ca9ad59ff9f1ff4f9c8ad3eef9a83ae 373 Gene3D G3DSA:3.20.20.70 104 324 4.4E-10 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS14420 0ca9ad59ff9f1ff4f9c8ad3eef9a83ae 373 SUPERFAMILY SSF102114 103 330 3.4E-13 T 09-03-2017 NA29_RS14420 0ca9ad59ff9f1ff4f9c8ad3eef9a83ae 373 PIRSF PIRSF006004 3 365 3.7E-145 T 09-03-2017 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS14420 0ca9ad59ff9f1ff4f9c8ad3eef9a83ae 373 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 357 1.7E-132 T 09-03-2017 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS14420 0ca9ad59ff9f1ff4f9c8ad3eef9a83ae 373 Pfam PF04055 Radical SAM superfamily 108 279 6.9E-17 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 NA29_RS14420 0ca9ad59ff9f1ff4f9c8ad3eef9a83ae 373 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 4 353 72.556 T 09-03-2017 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS24360 482b51337bc267125e3dc263c0228cb1 233 Pfam PF00510 Cytochrome c oxidase subunit III 41 233 1.0E-22 T 09-03-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24360 482b51337bc267125e3dc263c0228cb1 233 SUPERFAMILY SSF81452 21 233 3.79E-51 T 09-03-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS24360 482b51337bc267125e3dc263c0228cb1 233 Gene3D G3DSA:1.20.120.80 40 233 4.4E-50 T 09-03-2017 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS04375 647d514157ea4189ca1df9316a697bb1 562 Pfam PF00999 Sodium/hydrogen exchanger family 9 420 1.1E-74 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 NA29_RS04375 647d514157ea4189ca1df9316a697bb1 562 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 9 545 6.6E-133 T 09-03-2017 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 NA29_RS24880 7b34b71a40667e1aeaf473a42490e47a 662 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 1.2E-30 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 NA29_RS24880 7b34b71a40667e1aeaf473a42490e47a 662 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 1.2E-30 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 NA29_RS24880 7b34b71a40667e1aeaf473a42490e47a 662 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 1.2E-30 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 NA29_RS24880 7b34b71a40667e1aeaf473a42490e47a 662 PRINTS PR01005 Flagellar hook-associated protein signature 359 381 1.2E-30 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 NA29_RS24880 7b34b71a40667e1aeaf473a42490e47a 662 PRINTS PR01005 Flagellar hook-associated protein signature 215 233 1.2E-30 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 NA29_RS24880 7b34b71a40667e1aeaf473a42490e47a 662 PRINTS PR01005 Flagellar hook-associated protein signature 259 281 1.2E-30 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 NA29_RS24880 7b34b71a40667e1aeaf473a42490e47a 662 SUPERFAMILY SSF64518 130 457 7.32E-26 T 09-03-2017 NA29_RS24880 7b34b71a40667e1aeaf473a42490e47a 662 Pfam PF00460 Flagella basal body rod protein 4 33 1.4E-6 T 09-03-2017 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 NA29_RS24880 7b34b71a40667e1aeaf473a42490e47a 662 SUPERFAMILY SSF64518 455 660 1.18E-26 T 09-03-2017 NA29_RS24880 7b34b71a40667e1aeaf473a42490e47a 662 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 597 660 1.3E-11 T 09-03-2017 IPR010930 Flagellar basal-body/hook protein, C-terminal domain NA29_RS24880 7b34b71a40667e1aeaf473a42490e47a 662 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 371 1.2E-73 T 09-03-2017 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 NA29_RS19620 7139a2cdf17351c131271df17c39820d 1144 Gene3D G3DSA:1.10.10.160 90 190 2.7E-21 T 09-03-2017 IPR013986 DExx box DNA helicase domain NA29_RS19620 7139a2cdf17351c131271df17c39820d 1144 SUPERFAMILY SSF52540 1 332 5.31E-79 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19620 7139a2cdf17351c131271df17c39820d 1144 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1104 1.4E-218 T 09-03-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 NA29_RS19620 7139a2cdf17351c131271df17c39820d 1144 SUPERFAMILY SSF52980 817 1138 1.55E-59 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 NA29_RS19620 7139a2cdf17351c131271df17c39820d 1144 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1141 17.105 T 09-03-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 NA29_RS19620 7139a2cdf17351c131271df17c39820d 1144 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 792 4.0E-209 T 09-03-2017 NA29_RS19620 7139a2cdf17351c131271df17c39820d 1144 PIRSF PIRSF000980 1 1143 1.2E-280 T 09-03-2017 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 NA29_RS19620 7139a2cdf17351c131271df17c39820d 1144 SUPERFAMILY SSF52540 343 783 7.3E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS16585 81c4c11e9e4e26484325563b00237ae4 359 Pfam PF08402 TOBE domain 272 344 1.9E-14 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 NA29_RS16585 81c4c11e9e4e26484325563b00237ae4 359 SUPERFAMILY SSF52540 4 244 2.4E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS16585 81c4c11e9e4e26484325563b00237ae4 359 SUPERFAMILY SSF50331 236 352 1.41E-20 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal NA29_RS16585 81c4c11e9e4e26484325563b00237ae4 359 Gene3D G3DSA:2.40.50.140 275 337 7.4E-14 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS16585 81c4c11e9e4e26484325563b00237ae4 359 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS16585 81c4c11e9e4e26484325563b00237ae4 359 Pfam PF00005 ABC transporter 19 161 7.0E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS16585 81c4c11e9e4e26484325563b00237ae4 359 Gene3D G3DSA:3.40.50.300 4 234 2.1E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS16585 81c4c11e9e4e26484325563b00237ae4 359 SMART SM00382 28 211 2.8E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS19550 c2d1e61d40b6bab3804b1eb12756b869 297 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 257 37.175 T 09-03-2017 IPR020936 Uncharacterised protein family UPF0176 NA29_RS19550 c2d1e61d40b6bab3804b1eb12756b869 297 Gene3D G3DSA:3.40.250.10 104 229 3.7E-26 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS19550 c2d1e61d40b6bab3804b1eb12756b869 297 SUPERFAMILY SSF52821 90 217 3.84E-23 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS19550 c2d1e61d40b6bab3804b1eb12756b869 297 SMART SM00450 118 219 9.2E-11 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS08540 52e1cc1254166828984be7d6aaae1b75 241 Gene3D G3DSA:3.90.470.20 108 187 1.9E-10 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 NA29_RS08540 52e1cc1254166828984be7d6aaae1b75 241 SUPERFAMILY SSF56214 13 92 1.24E-18 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 NA29_RS08540 52e1cc1254166828984be7d6aaae1b75 241 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 100 180 2.1E-11 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 NA29_RS08540 52e1cc1254166828984be7d6aaae1b75 241 Gene3D G3DSA:3.90.470.20 9 107 1.6E-24 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 NA29_RS08540 52e1cc1254166828984be7d6aaae1b75 241 SUPERFAMILY SSF56214 100 190 8.11E-14 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 NA29_RS14915 ae0c76a2c6e7e37c21c138eaa6233085 143 SUPERFAMILY SSF88723 1 118 9.03E-10 T 09-03-2017 IPR029060 PIN domain-like NA29_RS14915 ae0c76a2c6e7e37c21c138eaa6233085 143 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 1 117 5.3E-11 T 09-03-2017 IPR002850 PIN family, putative toxin-antitoxin system toxin component NA29_RS14915 ae0c76a2c6e7e37c21c138eaa6233085 143 Pfam PF13470 PIN domain 1 113 7.6E-30 T 09-03-2017 IPR002716 PIN domain NA29_RS21360 7ec8a0faa19c5fa9161aa42979f0a3e3 303 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 281 2.5E-63 T 09-03-2017 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 NA29_RS16520 d6072b5b0ae7324798d3cdc2eec319f0 389 Gene3D G3DSA:2.40.160.50 189 385 1.3E-20 T 09-03-2017 NA29_RS17960 169b5021ceb8b82fecc456e4d58cb666 379 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 370 1.5E-73 T 09-03-2017 IPR005495 Permease LptG/LptF-related GO:0016021 NA29_RS17960 169b5021ceb8b82fecc456e4d58cb666 379 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 376 1.8E-107 T 09-03-2017 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 NA29_RS16025 91d9b1e4bc4cd70592d8ce955f19d3ee 423 Pfam PF02627 Carboxymuconolactone decarboxylase family 321 407 2.7E-15 T 09-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS16025 91d9b1e4bc4cd70592d8ce955f19d3ee 423 Pfam PF02627 Carboxymuconolactone decarboxylase family 178 262 5.6E-16 T 09-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS16025 91d9b1e4bc4cd70592d8ce955f19d3ee 423 Pfam PF02627 Carboxymuconolactone decarboxylase family 44 128 4.9E-13 T 09-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS16025 91d9b1e4bc4cd70592d8ce955f19d3ee 423 Gene3D G3DSA:1.20.1290.10 150 416 4.4E-58 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS16025 91d9b1e4bc4cd70592d8ce955f19d3ee 423 Gene3D G3DSA:1.20.1290.10 14 140 2.2E-28 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS16025 91d9b1e4bc4cd70592d8ce955f19d3ee 423 SUPERFAMILY SSF69118 292 410 3.29E-24 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS16025 91d9b1e4bc4cd70592d8ce955f19d3ee 423 SUPERFAMILY SSF69118 13 270 1.4E-59 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS11455 31e1567867e2b19e28ddac38a9ec46b3 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 6.8E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS11455 31e1567867e2b19e28ddac38a9ec46b3 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 6.8E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS11455 31e1567867e2b19e28ddac38a9ec46b3 251 SUPERFAMILY SSF46785 15 88 1.6E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11455 31e1567867e2b19e28ddac38a9ec46b3 251 Gene3D G3DSA:3.40.1410.10 102 238 7.4E-48 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain NA29_RS11455 31e1567867e2b19e28ddac38a9ec46b3 251 Pfam PF07702 UTRA domain 106 242 1.3E-30 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 NA29_RS11455 31e1567867e2b19e28ddac38a9ec46b3 251 SMART SM00345 25 84 8.1E-17 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS11455 31e1567867e2b19e28ddac38a9ec46b3 251 Gene3D G3DSA:1.10.10.10 14 92 4.6E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS11455 31e1567867e2b19e28ddac38a9ec46b3 251 SMART SM00866 105 242 7.3E-31 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 NA29_RS11455 31e1567867e2b19e28ddac38a9ec46b3 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 1.1E-17 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS11455 31e1567867e2b19e28ddac38a9ec46b3 251 SUPERFAMILY SSF64288 72 247 1.38E-41 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain NA29_RS11455 31e1567867e2b19e28ddac38a9ec46b3 251 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 20 248 5.3E-100 T 09-03-2017 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 NA29_RS15380 e40dac09805a549696056d6cd511809c 413 PIRSF PIRSF020818 1 413 2.0E-198 T 09-03-2017 IPR010915 Polyhydroxyalkanoate depolymerase NA29_RS15380 e40dac09805a549696056d6cd511809c 413 Pfam PF06850 PHB de-polymerase C-terminus 211 412 1.3E-97 T 09-03-2017 IPR009656 PHB de-polymerase, C-terminal NA29_RS15380 e40dac09805a549696056d6cd511809c 413 SUPERFAMILY SSF53474 106 409 1.52E-29 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS15380 e40dac09805a549696056d6cd511809c 413 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 411 8.4E-183 T 09-03-2017 IPR010915 Polyhydroxyalkanoate depolymerase NA29_RS15380 e40dac09805a549696056d6cd511809c 413 Gene3D G3DSA:3.40.50.1820 90 412 7.6E-8 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS14240 41b54a92e6cfd92e0f11a8d3938e01e1 262 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 3 249 45.648 T 09-03-2017 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic NA29_RS14240 41b54a92e6cfd92e0f11a8d3938e01e1 262 PIRSF PIRSF037208 8 258 4.9E-91 T 09-03-2017 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic NA29_RS14240 41b54a92e6cfd92e0f11a8d3938e01e1 262 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 23 93 1.4E-18 T 09-03-2017 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 NA29_RS14240 41b54a92e6cfd92e0f11a8d3938e01e1 262 SUPERFAMILY SSF55729 86 249 6.11E-21 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS14240 41b54a92e6cfd92e0f11a8d3938e01e1 262 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 113 239 5.7E-38 T 09-03-2017 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 NA29_RS23010 ff9a74e054d5e8edb0a1b61e0d4da285 154 PIRSF PIRSF003174 1 154 1.8E-67 T 09-03-2017 IPR010292 Uncharacterised protein family CreA NA29_RS23010 ff9a74e054d5e8edb0a1b61e0d4da285 154 Pfam PF05981 CreA protein 21 146 3.1E-54 T 09-03-2017 IPR010292 Uncharacterised protein family CreA NA29_RS08570 9c24374d45afc540967f2659db32e4cd 324 SUPERFAMILY SSF51197 8 316 1.51E-93 T 09-03-2017 NA29_RS08570 9c24374d45afc540967f2659db32e4cd 324 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 27 315 4.6E-52 T 09-03-2017 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 NA29_RS08570 9c24374d45afc540967f2659db32e4cd 324 Gene3D G3DSA:3.60.130.10 197 318 6.3E-72 T 09-03-2017 NA29_RS08570 9c24374d45afc540967f2659db32e4cd 324 Gene3D G3DSA:3.60.130.10 29 165 6.3E-72 T 09-03-2017 NA29_RS08370 cd3938fde2975e2f548f48ef0143f46d 366 PIRSF PIRSF000296 16 346 5.1E-123 T 09-03-2017 IPR024168 Catalase, SrpA-type, predicted NA29_RS08370 cd3938fde2975e2f548f48ef0143f46d 366 Pfam PF00199 Catalase 64 339 8.6E-26 T 09-03-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS08370 cd3938fde2975e2f548f48ef0143f46d 366 Gene3D G3DSA:2.40.180.10 46 347 5.6E-76 T 09-03-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS08370 cd3938fde2975e2f548f48ef0143f46d 366 SMART SM01060 33 364 4.3E-7 T 09-03-2017 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS08370 cd3938fde2975e2f548f48ef0143f46d 366 SUPERFAMILY SSF56634 22 343 1.03E-89 T 09-03-2017 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 NA29_RS15970 6534056f22f4751c2d8dce63cd417b0c 166 SUPERFAMILY SSF103088 62 164 1.06E-25 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS15970 6534056f22f4751c2d8dce63cd417b0c 166 Gene3D G3DSA:3.30.1330.60 64 165 6.5E-25 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS15970 6534056f22f4751c2d8dce63cd417b0c 166 Pfam PF00691 OmpA family 67 149 1.6E-12 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS15970 6534056f22f4751c2d8dce63cd417b0c 166 PRINTS PR01021 OMPA domain signature 113 129 1.5E-11 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NA29_RS15970 6534056f22f4751c2d8dce63cd417b0c 166 PRINTS PR01021 OMPA domain signature 68 90 1.5E-11 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NA29_RS15970 6534056f22f4751c2d8dce63cd417b0c 166 PRINTS PR01021 OMPA domain signature 98 113 1.5E-11 T 09-03-2017 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 NA29_RS08430 979a1356058706ad089bebc81fabdc52 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 4.2E-14 T 09-03-2017 IPR003004 GspF/PilC family NA29_RS08430 979a1356058706ad089bebc81fabdc52 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 4.2E-14 T 09-03-2017 IPR003004 GspF/PilC family NA29_RS08430 979a1356058706ad089bebc81fabdc52 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 4.2E-14 T 09-03-2017 IPR003004 GspF/PilC family NA29_RS08430 979a1356058706ad089bebc81fabdc52 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 4.2E-14 T 09-03-2017 IPR003004 GspF/PilC family NA29_RS08430 979a1356058706ad089bebc81fabdc52 406 Pfam PF00482 Type II secretion system (T2SS), protein F 73 196 1.2E-25 T 09-03-2017 IPR018076 Type II secretion system F domain NA29_RS08430 979a1356058706ad089bebc81fabdc52 406 Pfam PF00482 Type II secretion system (T2SS), protein F 279 397 4.8E-19 T 09-03-2017 IPR018076 Type II secretion system F domain NA29_RS06665 c4e8f79e83ca5727d6402ad10a99d13d 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 262 3.0E-13 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS06665 c4e8f79e83ca5727d6402ad10a99d13d 274 Gene3D G3DSA:1.10.3720.10 14 265 8.2E-44 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS06665 c4e8f79e83ca5727d6402ad10a99d13d 274 SUPERFAMILY SSF161098 8 263 2.49E-49 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS15955 a5cea457a9ebd673a6d2ff62c4588fd6 144 TIGRFAM TIGR02801 tolR: protein TolR 15 141 9.1E-40 T 09-03-2017 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 NA29_RS15955 a5cea457a9ebd673a6d2ff62c4588fd6 144 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 143 2.3E-27 T 09-03-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 NA29_RS03150 723c7030f29ca9cc144ac024b73fb4bc 233 Pfam PF01966 HD domain 43 145 1.8E-11 T 09-03-2017 IPR006674 HD domain NA29_RS03150 723c7030f29ca9cc144ac024b73fb4bc 233 Gene3D G3DSA:1.10.3210.10 198 226 9.8E-39 T 09-03-2017 IPR006674 HD domain NA29_RS03150 723c7030f29ca9cc144ac024b73fb4bc 233 Gene3D G3DSA:1.10.3210.10 33 159 9.8E-39 T 09-03-2017 IPR006674 HD domain NA29_RS03150 723c7030f29ca9cc144ac024b73fb4bc 233 SMART SM00471 37 155 2.5E-6 T 09-03-2017 IPR003607 HD/PDEase domain NA29_RS03150 723c7030f29ca9cc144ac024b73fb4bc 233 SUPERFAMILY SSF109604 30 226 1.1E-55 T 09-03-2017 NA29_RS08650 47f621faf0b9e570fb7d3796d866df15 268 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 237 259 3.5E-11 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal NA29_RS08650 47f621faf0b9e570fb7d3796d866df15 268 SMART SM00382 36 237 1.0E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS08650 47f621faf0b9e570fb7d3796d866df15 268 Pfam PF00005 ABC transporter 27 188 1.6E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS08650 47f621faf0b9e570fb7d3796d866df15 268 Gene3D G3DSA:3.40.50.300 9 258 5.5E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08650 47f621faf0b9e570fb7d3796d866df15 268 SUPERFAMILY SSF52540 10 259 9.12E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS09555 9d4bf99996e13d2bb05c4c63db4d5d17 209 Gene3D G3DSA:1.10.260.40 11 56 1.9E-5 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS09555 9d4bf99996e13d2bb05c4c63db4d5d17 209 SUPERFAMILY SSF51306 74 200 2.35E-19 T 09-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C NA29_RS09555 9d4bf99996e13d2bb05c4c63db4d5d17 209 Gene3D G3DSA:2.10.109.10 111 206 1.6E-23 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain NA29_RS09555 9d4bf99996e13d2bb05c4c63db4d5d17 209 Pfam PF00717 Peptidase S24-like 117 162 1.3E-11 T 09-03-2017 IPR019759 Peptidase S24/S26A/S26B NA29_RS01015 76c71e298c207a90b7bf2c5c43dd0e76 456 Pfam PF06864 Pilin accessory protein (PilO) 9 301 2.0E-11 T 09-03-2017 IPR009663 Pilin accessory predicted NA29_RS04970 7ddab24db087046a8127032a37b27e3c 672 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 40 672 6.1E-216 T 09-03-2017 IPR019899 Sodium/solute symporter, VC2705 subfamily NA29_RS04970 7ddab24db087046a8127032a37b27e3c 672 Pfam PF00474 Sodium:solute symporter family 487 602 7.7E-19 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NA29_RS04970 7ddab24db087046a8127032a37b27e3c 672 Pfam PF00474 Sodium:solute symporter family 65 236 6.7E-37 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NA29_RS11570 c8d479baf9c69734435533d79bca8669 492 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 88 221 3.0E-13 T 09-03-2017 NA29_RS13285 e3c812e0fbfedf254f52d8a53b915dd1 498 Gene3D G3DSA:3.30.1400.10 347 479 3.4E-26 T 09-03-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 NA29_RS13285 e3c812e0fbfedf254f52d8a53b915dd1 498 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 353 471 1.0E-9 T 09-03-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 NA29_RS13285 e3c812e0fbfedf254f52d8a53b915dd1 498 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 354 473 1.0E-5 T 09-03-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 NA29_RS13285 e3c812e0fbfedf254f52d8a53b915dd1 498 SMART SM00771 348 473 6.7E-21 T 09-03-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 NA29_RS13285 e3c812e0fbfedf254f52d8a53b915dd1 498 SUPERFAMILY SSF64383 348 480 6.02E-24 T 09-03-2017 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 NA29_RS24860 59f64fc3f51a64bdcda50b8d3dba7a8c 245 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 47 243 9.6E-90 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 NA29_RS24860 59f64fc3f51a64bdcda50b8d3dba7a8c 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 64 84 5.2E-66 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS24860 59f64fc3f51a64bdcda50b8d3dba7a8c 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 172 192 5.2E-66 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS24860 59f64fc3f51a64bdcda50b8d3dba7a8c 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 45 64 5.2E-66 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS24860 59f64fc3f51a64bdcda50b8d3dba7a8c 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 193 214 5.2E-66 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS24860 59f64fc3f51a64bdcda50b8d3dba7a8c 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 84 103 5.2E-66 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS24860 59f64fc3f51a64bdcda50b8d3dba7a8c 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 217 242 5.2E-66 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS24860 59f64fc3f51a64bdcda50b8d3dba7a8c 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 233 243 7.9E-30 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 NA29_RS24860 59f64fc3f51a64bdcda50b8d3dba7a8c 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 115 129 7.9E-30 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 NA29_RS24860 59f64fc3f51a64bdcda50b8d3dba7a8c 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 165 177 7.9E-30 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 NA29_RS24860 59f64fc3f51a64bdcda50b8d3dba7a8c 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 43 52 7.9E-30 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 NA29_RS24860 59f64fc3f51a64bdcda50b8d3dba7a8c 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 103 115 7.9E-30 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 NA29_RS24860 59f64fc3f51a64bdcda50b8d3dba7a8c 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 7.9E-30 T 09-03-2017 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 NA29_RS24860 59f64fc3f51a64bdcda50b8d3dba7a8c 245 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 172 187 - T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS24860 59f64fc3f51a64bdcda50b8d3dba7a8c 245 Pfam PF00813 FliP family 47 239 6.9E-79 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS24860 59f64fc3f51a64bdcda50b8d3dba7a8c 245 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 220 232 - T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS24540 946c380abe1fe693cd18a4efb55061aa 264 Pfam PF00005 ABC transporter 22 177 3.2E-26 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS24540 946c380abe1fe693cd18a4efb55061aa 264 SMART SM00382 31 226 3.5E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS24540 946c380abe1fe693cd18a4efb55061aa 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS24540 946c380abe1fe693cd18a4efb55061aa 264 SUPERFAMILY SSF52540 2 231 2.66E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS24540 946c380abe1fe693cd18a4efb55061aa 264 Gene3D G3DSA:3.40.50.300 1 235 1.4E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS02780 e1bb57e7ad0a1b3b2086282351ebb288 185 Pfam PF00156 Phosphoribosyl transferase domain 49 162 9.2E-16 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 NA29_RS02780 e1bb57e7ad0a1b3b2086282351ebb288 185 SUPERFAMILY SSF53271 13 182 1.44E-51 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS02780 e1bb57e7ad0a1b3b2086282351ebb288 185 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 13 182 36.03 T 09-03-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 NA29_RS02780 e1bb57e7ad0a1b3b2086282351ebb288 185 Gene3D G3DSA:3.40.50.2020 12 183 6.5E-62 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like NA29_RS02780 e1bb57e7ad0a1b3b2086282351ebb288 185 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 13 180 2.5E-62 T 09-03-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 NA29_RS11685 9d5c2b9b7f12877ba0d675f726eb17a5 414 TIGRFAM TIGR00937 2A51: chromate efflux transporter 29 409 5.3E-102 T 09-03-2017 IPR014047 Chromate transporter, long chain NA29_RS11685 9d5c2b9b7f12877ba0d675f726eb17a5 414 PIRSF PIRSF004810 6 414 2.1E-127 T 09-03-2017 IPR014047 Chromate transporter, long chain NA29_RS11685 9d5c2b9b7f12877ba0d675f726eb17a5 414 Pfam PF02417 Chromate transporter 24 188 5.3E-34 T 09-03-2017 IPR003370 Chromate transporter GO:0015109|GO:0015703 NA29_RS11685 9d5c2b9b7f12877ba0d675f726eb17a5 414 Pfam PF02417 Chromate transporter 243 409 4.2E-38 T 09-03-2017 IPR003370 Chromate transporter GO:0015109|GO:0015703 NA29_RS18635 d8a9aeb41c7c22da5b44e45ddc0ac001 553 Gene3D G3DSA:1.10.3720.10 10 267 5.9E-32 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS18635 d8a9aeb41c7c22da5b44e45ddc0ac001 553 Gene3D G3DSA:1.10.3720.10 295 550 5.3E-35 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS18635 d8a9aeb41c7c22da5b44e45ddc0ac001 553 SUPERFAMILY SSF161098 289 549 3.05E-39 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS18635 d8a9aeb41c7c22da5b44e45ddc0ac001 553 SUPERFAMILY SSF161098 5 268 2.49E-36 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS18635 d8a9aeb41c7c22da5b44e45ddc0ac001 553 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 267 4.6E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS18635 d8a9aeb41c7c22da5b44e45ddc0ac001 553 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 366 545 4.0E-11 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01330 d7950f62ed8b3757e1d4a0be6e9a6d6c 276 Pfam PF02219 Methylenetetrahydrofolate reductase 3 275 1.7E-92 T 09-03-2017 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 NA29_RS01330 d7950f62ed8b3757e1d4a0be6e9a6d6c 276 Gene3D G3DSA:3.20.20.220 3 276 8.8E-110 T 09-03-2017 IPR029041 FAD-linked oxidoreductase-like NA29_RS01330 d7950f62ed8b3757e1d4a0be6e9a6d6c 276 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 6 274 8.3E-102 T 09-03-2017 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 NA29_RS01330 d7950f62ed8b3757e1d4a0be6e9a6d6c 276 SUPERFAMILY SSF51730 3 275 1.08E-100 T 09-03-2017 IPR029041 FAD-linked oxidoreductase-like NA29_RS10130 825515faf14a05b334a84e1fe2149dc8 119 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 118 8.2E-36 T 09-03-2017 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS10130 825515faf14a05b334a84e1fe2149dc8 119 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 2 119 18.425 T 09-03-2017 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 NA29_RS12580 759a8ab87db6b0df9785bc9d0686d657 175 Gene3D G3DSA:1.10.10.10 5 107 4.8E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12580 759a8ab87db6b0df9785bc9d0686d657 175 Pfam PF01638 HxlR-like helix-turn-helix 20 107 1.7E-23 T 09-03-2017 IPR002577 Helix-turn-helix, HxlR type NA29_RS12580 759a8ab87db6b0df9785bc9d0686d657 175 SUPERFAMILY SSF46785 10 143 4.73E-35 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20725 a6b08ab92fc9eee21a396087d36a1138 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 292 4.5E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS20725 a6b08ab92fc9eee21a396087d36a1138 299 SUPERFAMILY SSF161098 27 292 5.14E-56 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS20725 a6b08ab92fc9eee21a396087d36a1138 299 Gene3D G3DSA:1.10.3720.10 22 278 1.6E-52 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS11290 ec9a07fda4f0d79a9e6bc36b81c88aa6 318 Gene3D G3DSA:3.90.850.10 94 316 4.9E-85 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS11290 ec9a07fda4f0d79a9e6bc36b81c88aa6 318 SUPERFAMILY SSF56529 97 315 6.67E-76 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS11290 ec9a07fda4f0d79a9e6bc36b81c88aa6 318 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 103 314 3.6E-75 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS16515 32dc3c6fcd33f1f1c3af2c80c55852ce 190 SUPERFAMILY SSF102405 105 169 1.34E-19 T 09-03-2017 NA29_RS16515 32dc3c6fcd33f1f1c3af2c80c55852ce 190 SUPERFAMILY SSF102405 7 72 1.34E-19 T 09-03-2017 NA29_RS16515 32dc3c6fcd33f1f1c3af2c80c55852ce 190 Gene3D G3DSA:3.40.50.450 8 75 1.5E-23 T 09-03-2017 NA29_RS16515 32dc3c6fcd33f1f1c3af2c80c55852ce 190 Gene3D G3DSA:3.40.50.450 108 169 1.5E-23 T 09-03-2017 NA29_RS14535 31ed9436a2284d640b388f669859c916 200 Pfam PF13662 Toprim domain 83 173 6.4E-23 T 09-03-2017 IPR006171 Toprim domain NA29_RS14535 31ed9436a2284d640b388f669859c916 200 TIGRFAM TIGR00615 recR: recombination protein RecR 7 198 1.2E-69 T 09-03-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 NA29_RS14535 31ed9436a2284d640b388f669859c916 200 SMART SM00493 82 167 3.7E-10 T 09-03-2017 IPR006171 Toprim domain NA29_RS14535 31ed9436a2284d640b388f669859c916 200 Pfam PF02132 RecR protein 42 80 2.9E-14 T 09-03-2017 IPR023628 Recombination protein RecR, C4-type zinc finger NA29_RS14535 31ed9436a2284d640b388f669859c916 200 Hamap MF_00017 Recombination protein RecR [recR]. 1 200 93.628 T 09-03-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 NA29_RS14535 31ed9436a2284d640b388f669859c916 200 SUPERFAMILY SSF111304 6 200 2.22E-72 T 09-03-2017 IPR023627 Recombination protein RecR NA29_RS19780 46fbab1974907b8670db137ac788f42f 338 Gene3D G3DSA:1.20.58.340 264 336 9.1E-20 T 09-03-2017 NA29_RS19780 46fbab1974907b8670db137ac788f42f 338 SUPERFAMILY SSF143865 15 271 8.63E-41 T 09-03-2017 NA29_RS19780 46fbab1974907b8670db137ac788f42f 338 SUPERFAMILY SSF144083 274 335 8.24E-16 T 09-03-2017 NA29_RS19780 46fbab1974907b8670db137ac788f42f 338 Gene3D G3DSA:1.20.58.340 153 252 8.2E-4 T 09-03-2017 NA29_RS19780 46fbab1974907b8670db137ac788f42f 338 Pfam PF01544 CorA-like Mg2+ transporter protein 48 335 7.3E-58 T 09-03-2017 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 NA29_RS08605 db6bfc7f48b4156b71c7a60d359ac1cf 695 Gene3D G3DSA:1.10.3470.10 366 685 2.7E-77 T 09-03-2017 IPR029022 ABC transporter, BtuC-like NA29_RS08605 db6bfc7f48b4156b71c7a60d359ac1cf 695 Pfam PF01032 FecCD transport family 381 685 3.8E-72 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 NA29_RS08605 db6bfc7f48b4156b71c7a60d359ac1cf 695 Pfam PF01032 FecCD transport family 53 343 6.3E-56 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 NA29_RS08605 db6bfc7f48b4156b71c7a60d359ac1cf 695 SUPERFAMILY SSF81345 21 343 2.48E-50 T 09-03-2017 IPR029022 ABC transporter, BtuC-like NA29_RS08605 db6bfc7f48b4156b71c7a60d359ac1cf 695 SUPERFAMILY SSF81345 366 685 9.94E-65 T 09-03-2017 IPR029022 ABC transporter, BtuC-like NA29_RS08605 db6bfc7f48b4156b71c7a60d359ac1cf 695 Gene3D G3DSA:1.10.3470.10 23 343 1.2E-61 T 09-03-2017 IPR029022 ABC transporter, BtuC-like NA29_RS04115 a54e94eb3934b44f1a8c8a735e9855de 152 SUPERFAMILY SSF55729 19 136 9.59E-19 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS04115 a54e94eb3934b44f1a8c8a735e9855de 152 Gene3D G3DSA:3.40.630.30 16 142 2.0E-20 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS04115 a54e94eb3934b44f1a8c8a735e9855de 152 Pfam PF00583 Acetyltransferase (GNAT) family 54 130 4.6E-8 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS07050 20a1166f075424fbfde6a8ad962ca07e 246 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 233 2.1E-85 T 09-03-2017 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS07050 20a1166f075424fbfde6a8ad962ca07e 246 SUPERFAMILY SSF53098 1 175 1.45E-53 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS07050 20a1166f075424fbfde6a8ad962ca07e 246 Gene3D G3DSA:3.30.420.10 1 174 9.5E-62 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS07050 20a1166f075424fbfde6a8ad962ca07e 246 SMART SM00479 2 174 8.0E-49 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III NA29_RS07050 20a1166f075424fbfde6a8ad962ca07e 246 Pfam PF00929 Exonuclease 4 165 8.5E-34 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III NA29_RS07050 20a1166f075424fbfde6a8ad962ca07e 246 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 213 3.0E-57 T 09-03-2017 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS03625 e419b489d0e7653ce2d7159340bcb250 482 Pfam PF02447 GntP family permease 3 161 1.6E-9 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 NA29_RS16775 5a2b1e32c53862ab466f24e2df011deb 320 SMART SM00972 88 157 3.3E-4 T 09-03-2017 IPR007893 Spore coat protein U NA29_RS16775 5a2b1e32c53862ab466f24e2df011deb 320 SMART SM00972 257 317 1.8E-20 T 09-03-2017 IPR007893 Spore coat protein U NA29_RS16775 5a2b1e32c53862ab466f24e2df011deb 320 Pfam PF05229 Spore Coat Protein U domain 16 149 1.7E-17 T 09-03-2017 IPR007893 Spore coat protein U NA29_RS16775 5a2b1e32c53862ab466f24e2df011deb 320 Pfam PF05229 Spore Coat Protein U domain 183 317 4.6E-31 T 09-03-2017 IPR007893 Spore coat protein U NA29_RS14575 2a74eecfce9bde9b03b136470136ebeb 352 Pfam PF01734 Patatin-like phospholipase 87 246 4.1E-27 T 09-03-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NA29_RS14575 2a74eecfce9bde9b03b136470136ebeb 352 Gene3D G3DSA:3.40.1090.10 83 248 1.1E-20 T 09-03-2017 NA29_RS14575 2a74eecfce9bde9b03b136470136ebeb 352 SUPERFAMILY SSF52151 82 336 2.38E-62 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NA29_RS17520 3b45163cd1df042bc96b53ee6836b176 478 Pfam PF02913 FAD linked oxidases, C-terminal domain 224 475 3.0E-48 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 NA29_RS17520 3b45163cd1df042bc96b53ee6836b176 478 Pfam PF01565 FAD binding domain 46 184 1.5E-34 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NA29_RS17520 3b45163cd1df042bc96b53ee6836b176 478 Gene3D G3DSA:1.10.45.10 437 476 2.0E-10 T 09-03-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 NA29_RS17520 3b45163cd1df042bc96b53ee6836b176 478 Gene3D G3DSA:3.30.43.10 4 101 1.7E-25 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 NA29_RS17520 3b45163cd1df042bc96b53ee6836b176 478 SUPERFAMILY SSF56176 9 224 3.55E-73 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS17520 3b45163cd1df042bc96b53ee6836b176 478 SUPERFAMILY SSF55103 198 476 1.44E-50 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NA29_RS17520 3b45163cd1df042bc96b53ee6836b176 478 Gene3D G3DSA:3.30.465.10 104 224 2.3E-37 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS15340 51663b9e9050af160558fbac7d13cd26 107 Gene3D G3DSA:2.60.300.12 2 96 1.3E-34 T 09-03-2017 IPR000361 FeS cluster biogenesis NA29_RS15340 51663b9e9050af160558fbac7d13cd26 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.4E-23 T 09-03-2017 IPR000361 FeS cluster biogenesis NA29_RS15340 51663b9e9050af160558fbac7d13cd26 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 7.5E-37 T 09-03-2017 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 NA29_RS15340 51663b9e9050af160558fbac7d13cd26 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 09-03-2017 IPR017870 FeS cluster insertion, C-terminal, conserved site NA29_RS15340 51663b9e9050af160558fbac7d13cd26 107 SUPERFAMILY SSF89360 1 96 5.1E-32 T 09-03-2017 IPR000361 FeS cluster biogenesis NA29_RS15340 51663b9e9050af160558fbac7d13cd26 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 8.5E-53 T 09-03-2017 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 NA29_RS01130 8b20ef148654c2a086b1dbbb89ab0d49 422 SUPERFAMILY SSF55874 275 411 4.32E-24 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS01130 8b20ef148654c2a086b1dbbb89ab0d49 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 310 412 5.8E-13 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS01130 8b20ef148654c2a086b1dbbb89ab0d49 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 2.1E-6 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS01130 8b20ef148654c2a086b1dbbb89ab0d49 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 2.1E-6 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS01130 8b20ef148654c2a086b1dbbb89ab0d49 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 358 2.1E-6 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 NA29_RS01130 8b20ef148654c2a086b1dbbb89ab0d49 422 SMART SM00387 309 413 8.9E-19 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS01130 8b20ef148654c2a086b1dbbb89ab0d49 422 Gene3D G3DSA:3.30.565.10 286 412 1.6E-22 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS08560 6c21d9423bce4d4dd502a307b291da32 458 Gene3D G3DSA:3.50.50.60 26 223 7.6E-14 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08560 6c21d9423bce4d4dd502a307b291da32 458 SUPERFAMILY SSF51905 289 406 4.57E-7 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08560 6c21d9423bce4d4dd502a307b291da32 458 SUPERFAMILY SSF51905 169 182 4.57E-7 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08560 6c21d9423bce4d4dd502a307b291da32 458 SUPERFAMILY SSF51905 213 245 4.57E-7 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08560 6c21d9423bce4d4dd502a307b291da32 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 219 237 2.4E-6 T 09-03-2017 NA29_RS08560 6c21d9423bce4d4dd502a307b291da32 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 22 41 2.4E-6 T 09-03-2017 NA29_RS08560 6c21d9423bce4d4dd502a307b291da32 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 2.4E-6 T 09-03-2017 NA29_RS08560 6c21d9423bce4d4dd502a307b291da32 458 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 19 367 5.7E-126 T 09-03-2017 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase NA29_RS08560 6c21d9423bce4d4dd502a307b291da32 458 Gene3D G3DSA:3.50.50.60 309 364 5.1E-7 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08560 6c21d9423bce4d4dd502a307b291da32 458 Gene3D G3DSA:3.50.50.60 224 257 5.1E-7 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08560 6c21d9423bce4d4dd502a307b291da32 458 SUPERFAMILY SSF51905 19 284 2.51E-23 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS04575 fbf282360756c621a7417e0fcbbbd441 208 Pfam PF01161 Phosphatidylethanolamine-binding protein 32 201 3.2E-38 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein NA29_RS04575 fbf282360756c621a7417e0fcbbbd441 208 Gene3D G3DSA:3.90.280.10 1 206 4.3E-61 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein NA29_RS04575 fbf282360756c621a7417e0fcbbbd441 208 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 80 201 9.8E-20 T 09-03-2017 IPR005247 YbhB/YbcL NA29_RS04575 fbf282360756c621a7417e0fcbbbd441 208 SUPERFAMILY SSF49777 1 203 2.62E-40 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein NA29_RS08390 95303fde71a56082e96d8f3e0e075ecd 176 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site NA29_RS08390 95303fde71a56082e96d8f3e0e075ecd 176 SUPERFAMILY SSF54523 22 132 1.15E-19 T 09-03-2017 NA29_RS08390 95303fde71a56082e96d8f3e0e075ecd 176 PRINTS PR00813 Bacterial general secretion pathway protein G signature 21 46 6.3E-9 T 09-03-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 NA29_RS08390 95303fde71a56082e96d8f3e0e075ecd 176 PRINTS PR00813 Bacterial general secretion pathway protein G signature 57 75 6.3E-9 T 09-03-2017 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 NA29_RS08390 95303fde71a56082e96d8f3e0e075ecd 176 Pfam PF13633 Prokaryotic N-terminal methylation site 20 45 8.2E-9 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site NA29_RS08390 95303fde71a56082e96d8f3e0e075ecd 176 Gene3D G3DSA:3.30.700.10 22 131 1.2E-10 T 09-03-2017 NA29_RS08390 95303fde71a56082e96d8f3e0e075ecd 176 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 41 1.5E-6 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site NA29_RS18805 05df0837ec8e563112bf374c9e8421f0 262 Pfam PF00561 alpha/beta hydrolase fold 25 138 3.4E-17 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS18805 05df0837ec8e563112bf374c9e8421f0 262 Pfam PF08386 TAP-like protein 196 261 7.1E-5 T 09-03-2017 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal NA29_RS18805 05df0837ec8e563112bf374c9e8421f0 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 7.1E-10 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS18805 05df0837ec8e563112bf374c9e8421f0 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 7.1E-10 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS18805 05df0837ec8e563112bf374c9e8421f0 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 207 221 7.1E-10 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS18805 05df0837ec8e563112bf374c9e8421f0 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 7.1E-10 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS18805 05df0837ec8e563112bf374c9e8421f0 262 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 18 261 1.4E-91 T 09-03-2017 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 NA29_RS18805 05df0837ec8e563112bf374c9e8421f0 262 SUPERFAMILY SSF53474 2 261 3.33E-65 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS18805 05df0837ec8e563112bf374c9e8421f0 262 Gene3D G3DSA:3.40.50.1820 5 261 2.6E-62 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS04350 c48c604dcc545b065f152d424d92f6e5 206 Pfam PF12804 MobA-like NTP transferase domain 10 180 9.2E-31 T 09-03-2017 IPR025877 MobA-like NTP transferase NA29_RS04350 c48c604dcc545b065f152d424d92f6e5 206 Gene3D G3DSA:3.90.550.10 9 206 2.1E-26 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS04350 c48c604dcc545b065f152d424d92f6e5 206 SUPERFAMILY SSF53448 9 205 1.91E-23 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS00520 12ba4e9498f36e7dedeab9051580dfe0 181 Gene3D G3DSA:3.40.630.30 11 175 2.8E-39 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS00520 12ba4e9498f36e7dedeab9051580dfe0 181 Pfam PF13420 Acetyltransferase (GNAT) domain 12 166 4.5E-20 T 09-03-2017 NA29_RS00520 12ba4e9498f36e7dedeab9051580dfe0 181 SUPERFAMILY SSF55729 12 173 1.51E-30 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS18145 de7d65d24aa7077d93d4adfdf79afe2f 287 Pfam PF13460 NAD(P)H-binding 6 190 7.3E-16 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18145 de7d65d24aa7077d93d4adfdf79afe2f 287 SUPERFAMILY SSF51735 3 237 1.37E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS18145 de7d65d24aa7077d93d4adfdf79afe2f 287 Gene3D G3DSA:3.40.50.720 3 223 3.5E-27 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS14005 c4451982a68a252d1d955299f6ca323c 205 Pfam PF01810 LysE type translocator 17 203 8.8E-29 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS03975 0e24b2e9a092474d6c20ebd73a5ee3a9 328 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 19 321 7.3E-120 T 09-03-2017 IPR010068 Periplasmic binding protein TauA GO:0015734|GO:0042597 NA29_RS03975 0e24b2e9a092474d6c20ebd73a5ee3a9 328 Pfam PF13379 NMT1-like family 13 234 2.6E-19 T 09-03-2017 NA29_RS03975 0e24b2e9a092474d6c20ebd73a5ee3a9 328 SMART SM00062 18 256 1.7E-6 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS03975 0e24b2e9a092474d6c20ebd73a5ee3a9 328 Gene3D G3DSA:3.40.190.10 114 222 2.3E-24 T 09-03-2017 NA29_RS03975 0e24b2e9a092474d6c20ebd73a5ee3a9 328 Gene3D G3DSA:3.40.190.10 40 113 8.7E-4 T 09-03-2017 NA29_RS03975 0e24b2e9a092474d6c20ebd73a5ee3a9 328 SUPERFAMILY SSF53850 16 234 3.17E-46 T 09-03-2017 NA29_RS14605 3ff28f7075c7fe0518ca1f1f899858e3 235 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 32 188 5.3E-48 T 09-03-2017 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 NA29_RS14605 3ff28f7075c7fe0518ca1f1f899858e3 235 SUPERFAMILY SSF51197 39 232 3.84E-24 T 09-03-2017 NA29_RS14605 3ff28f7075c7fe0518ca1f1f899858e3 235 Gene3D G3DSA:2.60.120.330 82 194 1.9E-16 T 09-03-2017 IPR027443 Isopenicillin N synthase-like NA29_RS14505 0c79db9ae0ccb9a0775cb8751449417c 240 Pfam PF03412 Peptidase C39 family 59 193 2.6E-26 T 09-03-2017 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 NA29_RS14505 0c79db9ae0ccb9a0775cb8751449417c 240 Gene3D G3DSA:3.90.70.10 106 193 1.8E-9 T 09-03-2017 NA29_RS16730 478a2b33556230994f9ba643192ead55 99 Gene3D G3DSA:3.30.70.900 1 93 1.6E-18 T 09-03-2017 NA29_RS16730 478a2b33556230994f9ba643192ead55 99 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 3.2E-15 T 09-03-2017 IPR007138 Antibiotic biosynthesis monooxygenase domain NA29_RS16730 478a2b33556230994f9ba643192ead55 99 SUPERFAMILY SSF54909 1 95 3.76E-33 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS13570 5dc0668c1d8587c64a0320cf7612c78d 93 Pfam PF01084 Ribosomal protein S18 36 85 8.9E-23 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS13570 5dc0668c1d8587c64a0320cf7612c78d 93 SUPERFAMILY SSF46911 16 88 2.01E-27 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS13570 5dc0668c1d8587c64a0320cf7612c78d 93 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 38 89 6.0E-23 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS13570 5dc0668c1d8587c64a0320cf7612c78d 93 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 19 90 19.843 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS13570 5dc0668c1d8587c64a0320cf7612c78d 93 PRINTS PR00974 Ribosomal protein S18 family signature 77 87 1.0E-14 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS13570 5dc0668c1d8587c64a0320cf7612c78d 93 PRINTS PR00974 Ribosomal protein S18 family signature 55 62 1.0E-14 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS13570 5dc0668c1d8587c64a0320cf7612c78d 93 PRINTS PR00974 Ribosomal protein S18 family signature 45 55 1.0E-14 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS13570 5dc0668c1d8587c64a0320cf7612c78d 93 PRINTS PR00974 Ribosomal protein S18 family signature 63 77 1.0E-14 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS13570 5dc0668c1d8587c64a0320cf7612c78d 93 Gene3D G3DSA:4.10.640.10 25 89 2.3E-29 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS13570 5dc0668c1d8587c64a0320cf7612c78d 93 ProSitePatterns PS00057 Ribosomal protein S18 signature. 38 61 - T 09-03-2017 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS13570 5dc0668c1d8587c64a0320cf7612c78d 93 TIGRFAM TIGR00165 S18: ribosomal protein bS18 22 89 3.9E-32 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS17805 26c70e446925dfde90427cd197af85b2 97 Pfam PF06305 Protein of unknown function (DUF1049) 23 84 6.5E-17 T 09-03-2017 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 NA29_RS24705 276d23f288aa1852bceba5eb75e8a7a1 230 Pfam PF02107 Flagellar L-ring protein 53 229 1.7E-41 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NA29_RS24705 276d23f288aa1852bceba5eb75e8a7a1 230 PRINTS PR01008 Flagellar L-ring protein signature 191 205 8.4E-14 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NA29_RS24705 276d23f288aa1852bceba5eb75e8a7a1 230 PRINTS PR01008 Flagellar L-ring protein signature 144 159 8.4E-14 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NA29_RS24705 276d23f288aa1852bceba5eb75e8a7a1 230 PRINTS PR01008 Flagellar L-ring protein signature 170 186 8.4E-14 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NA29_RS24705 276d23f288aa1852bceba5eb75e8a7a1 230 PRINTS PR01008 Flagellar L-ring protein signature 207 221 8.4E-14 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NA29_RS24705 276d23f288aa1852bceba5eb75e8a7a1 230 PRINTS PR01008 Flagellar L-ring protein signature 74 86 8.4E-14 T 09-03-2017 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 NA29_RS02770 f40fff8e9100f4cad44e69ed8c39971f 326 Pfam PF01380 SIS domain 43 174 1.1E-31 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 NA29_RS02770 f40fff8e9100f4cad44e69ed8c39971f 326 Gene3D G3DSA:3.40.50.10490 13 198 8.4E-55 T 09-03-2017 NA29_RS02770 f40fff8e9100f4cad44e69ed8c39971f 326 Pfam PF00571 CBS domain 272 323 1.2E-6 T 09-03-2017 IPR000644 CBS domain NA29_RS02770 f40fff8e9100f4cad44e69ed8c39971f 326 Pfam PF00571 CBS domain 204 260 4.3E-7 T 09-03-2017 IPR000644 CBS domain NA29_RS02770 f40fff8e9100f4cad44e69ed8c39971f 326 SMART SM00116 213 261 0.049 T 09-03-2017 IPR000644 CBS domain NA29_RS02770 f40fff8e9100f4cad44e69ed8c39971f 326 SMART SM00116 278 325 0.013 T 09-03-2017 IPR000644 CBS domain NA29_RS02770 f40fff8e9100f4cad44e69ed8c39971f 326 Gene3D G3DSA:3.10.580.10 199 321 9.6E-39 T 09-03-2017 NA29_RS02770 f40fff8e9100f4cad44e69ed8c39971f 326 SUPERFAMILY SSF53697 11 324 5.56E-71 T 09-03-2017 NA29_RS02770 f40fff8e9100f4cad44e69ed8c39971f 326 PIRSF PIRSF004692 2 326 2.2E-131 T 09-03-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 NA29_RS02770 f40fff8e9100f4cad44e69ed8c39971f 326 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 48 316 1.8E-106 T 09-03-2017 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 NA29_RS06290 0174ba9620f3dc7189d6c2f8b62c08c9 142 SUPERFAMILY SSF54593 1 136 3.15E-32 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS06290 0174ba9620f3dc7189d6c2f8b62c08c9 142 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 134 1.9E-11 T 09-03-2017 IPR028973 PhnB-like NA29_RS06290 0174ba9620f3dc7189d6c2f8b62c08c9 142 Gene3D G3DSA:3.10.180.10 7 138 3.9E-44 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS13700 6b9fc0570fb58396ef5766f56c827783 414 Pfam PF13533 Biotin-lipoyl like 60 108 2.2E-12 T 09-03-2017 NA29_RS13700 6b9fc0570fb58396ef5766f56c827783 414 SUPERFAMILY SSF111369 117 180 1.2E-5 T 09-03-2017 NA29_RS13700 6b9fc0570fb58396ef5766f56c827783 414 SUPERFAMILY SSF111369 55 113 3.66E-7 T 09-03-2017 NA29_RS13700 6b9fc0570fb58396ef5766f56c827783 414 Gene3D G3DSA:2.40.50.100 214 247 3.6E-19 T 09-03-2017 NA29_RS13700 6b9fc0570fb58396ef5766f56c827783 414 Gene3D G3DSA:2.40.50.100 60 93 3.6E-19 T 09-03-2017 NA29_RS13700 6b9fc0570fb58396ef5766f56c827783 414 Pfam PF13437 HlyD family secretion protein 217 337 3.7E-15 T 09-03-2017 NA29_RS13700 6b9fc0570fb58396ef5766f56c827783 414 SUPERFAMILY SSF111369 179 267 8.24E-8 T 09-03-2017 NA29_RS07935 9b58974c687239d27cf6b76fbecf0b1e 294 SUPERFAMILY SSF52821 172 293 7.99E-29 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS07935 9b58974c687239d27cf6b76fbecf0b1e 294 Gene3D G3DSA:3.40.250.10 168 292 8.8E-32 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS07935 9b58974c687239d27cf6b76fbecf0b1e 294 Pfam PF00581 Rhodanese-like domain 28 137 3.4E-16 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS07935 9b58974c687239d27cf6b76fbecf0b1e 294 Pfam PF00581 Rhodanese-like domain 171 282 2.4E-7 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS07935 9b58974c687239d27cf6b76fbecf0b1e 294 SMART SM00450 165 286 7.7E-8 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS07935 9b58974c687239d27cf6b76fbecf0b1e 294 SMART SM00450 10 141 4.0E-17 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS07935 9b58974c687239d27cf6b76fbecf0b1e 294 SUPERFAMILY SSF52821 2 154 4.71E-38 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS07935 9b58974c687239d27cf6b76fbecf0b1e 294 ProSitePatterns PS00683 Rhodanese C-terminal signature. 270 280 - T 09-03-2017 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 NA29_RS07935 9b58974c687239d27cf6b76fbecf0b1e 294 Gene3D G3DSA:3.40.250.10 3 156 3.3E-47 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS13560 f3c4ec6ffc021b68fac1486915568849 455 SUPERFAMILY SSF48024 12 123 1.27E-37 T 09-03-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 NA29_RS13560 f3c4ec6ffc021b68fac1486915568849 455 Pfam PF00772 DnaB-like helicase N terminal domain 14 115 6.6E-35 T 09-03-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 NA29_RS13560 f3c4ec6ffc021b68fac1486915568849 455 SUPERFAMILY SSF52540 192 441 1.47E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS13560 f3c4ec6ffc021b68fac1486915568849 455 Pfam PF03796 DnaB-like helicase C terminal domain 194 449 3.1E-118 T 09-03-2017 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 NA29_RS13560 f3c4ec6ffc021b68fac1486915568849 455 SMART SM00382 211 409 2.3E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS13560 f3c4ec6ffc021b68fac1486915568849 455 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 14 451 2.5E-178 T 09-03-2017 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 NA29_RS13560 f3c4ec6ffc021b68fac1486915568849 455 Gene3D G3DSA:1.10.860.10 14 116 1.8E-37 T 09-03-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal NA29_RS13560 f3c4ec6ffc021b68fac1486915568849 455 Gene3D G3DSA:3.40.50.300 178 451 9.1E-109 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19010 37f93eb147dde904c97a7499aafaf813 417 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 202 213 2.3E-9 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NA29_RS19010 37f93eb147dde904c97a7499aafaf813 417 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 279 292 2.3E-9 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NA29_RS19010 37f93eb147dde904c97a7499aafaf813 417 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 252 269 2.3E-9 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 NA29_RS19010 37f93eb147dde904c97a7499aafaf813 417 SUPERFAMILY SSF56601 174 398 1.15E-45 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS19010 37f93eb147dde904c97a7499aafaf813 417 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 173 394 5.4E-44 T 09-03-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 NA29_RS19010 37f93eb147dde904c97a7499aafaf813 417 Gene3D G3DSA:3.40.710.10 164 400 1.9E-49 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS01580 8a4ee0f9d27294330f2f45caf131921a 141 SUPERFAMILY SSF53955 4 132 2.95E-34 T 09-03-2017 IPR023346 Lysozyme-like domain NA29_RS01580 8a4ee0f9d27294330f2f45caf131921a 141 Gene3D G3DSA:1.10.530.10 11 130 4.7E-20 T 09-03-2017 NA29_RS01580 8a4ee0f9d27294330f2f45caf131921a 141 Pfam PF01464 Transglycosylase SLT domain 9 122 3.3E-24 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 NA29_RS07640 f22966f300b4e30d7f69c2b6f710fd9d 484 Gene3D G3DSA:3.40.605.10 7 264 9.9E-87 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS07640 f22966f300b4e30d7f69c2b6f710fd9d 484 Pfam PF00171 Aldehyde dehydrogenase family 15 480 8.0E-157 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS07640 f22966f300b4e30d7f69c2b6f710fd9d 484 SUPERFAMILY SSF53720 4 483 1.57E-146 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS07640 f22966f300b4e30d7f69c2b6f710fd9d 484 Gene3D G3DSA:3.40.309.10 265 453 1.1E-59 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS07640 f22966f300b4e30d7f69c2b6f710fd9d 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS07640 f22966f300b4e30d7f69c2b6f710fd9d 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS09640 acf2fd4dc597c49cb7a6814b4df599d8 220 Pfam PF11041 Protein of unknown function (DUF2612) 7 186 5.2E-62 T 09-03-2017 IPR021283 Protein of unknown function DUF2612 NA29_RS05220 f90f39dfdf48aab3c2c2f1f7323ff403 178 Gene3D G3DSA:1.20.1290.10 54 167 6.1E-19 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS05220 f90f39dfdf48aab3c2c2f1f7323ff403 178 SUPERFAMILY SSF69118 28 167 1.3E-20 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS13440 275ecd512d74716f2abf0ac301758750 393 SUPERFAMILY SSF55874 230 375 9.31E-15 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS13440 275ecd512d74716f2abf0ac301758750 393 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 272 376 6.8E-5 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS13440 275ecd512d74716f2abf0ac301758750 393 Gene3D G3DSA:3.30.565.10 227 377 7.7E-11 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS13440 275ecd512d74716f2abf0ac301758750 393 SMART SM00387 268 378 0.0026 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain NA29_RS13440 275ecd512d74716f2abf0ac301758750 393 Pfam PF06580 Histidine kinase 174 253 5.0E-20 T 09-03-2017 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 NA29_RS12670 10dc40ace858ffd6f7e2fced1817447a 360 Gene3D G3DSA:3.40.190.10 58 157 1.2E-14 T 09-03-2017 NA29_RS12670 10dc40ace858ffd6f7e2fced1817447a 360 Gene3D G3DSA:3.40.190.10 158 300 6.8E-39 T 09-03-2017 NA29_RS12670 10dc40ace858ffd6f7e2fced1817447a 360 Pfam PF13416 Bacterial extracellular solute-binding protein 61 315 7.8E-39 T 09-03-2017 NA29_RS12670 10dc40ace858ffd6f7e2fced1817447a 360 SUPERFAMILY SSF53850 41 357 7.56E-64 T 09-03-2017 NA29_RS07775 1a6842843d9fd73ac3ae750cbafeda2c 290 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 278 6.3E-39 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS06005 47a9f6c70aafbd16a054de110962423d 342 SUPERFAMILY SSF53850 59 329 1.17E-35 T 09-03-2017 NA29_RS06005 47a9f6c70aafbd16a054de110962423d 342 Gene3D G3DSA:3.40.190.10 129 215 1.5E-11 T 09-03-2017 NA29_RS06005 47a9f6c70aafbd16a054de110962423d 342 Pfam PF09084 NMT1/THI5 like 59 272 1.4E-21 T 09-03-2017 IPR015168 SsuA/THI5-like NA29_RS23410 1627652076c0bb0f2dd37b5e9991d663 148 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 144 1.1E-42 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NA29_RS23410 1627652076c0bb0f2dd37b5e9991d663 148 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 147 26.658 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NA29_RS23410 1627652076c0bb0f2dd37b5e9991d663 148 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 09-03-2017 IPR019823 Large-conductance mechanosensitive channel, conserved site NA29_RS23410 1627652076c0bb0f2dd37b5e9991d663 148 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 146 5.2E-38 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NA29_RS23410 1627652076c0bb0f2dd37b5e9991d663 148 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 97 105 9.8E-13 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NA29_RS23410 1627652076c0bb0f2dd37b5e9991d663 148 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 106 115 9.8E-13 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NA29_RS23410 1627652076c0bb0f2dd37b5e9991d663 148 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 9.8E-13 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NA29_RS23410 1627652076c0bb0f2dd37b5e9991d663 148 SUPERFAMILY SSF81330 13 140 6.8E-35 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 NA29_RS03965 8d9fede72ddcba610112b105d4f7b6d2 293 Gene3D G3DSA:1.10.3720.10 92 287 1.2E-27 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS03965 8d9fede72ddcba610112b105d4f7b6d2 293 SUPERFAMILY SSF161098 93 279 7.85E-35 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS03965 8d9fede72ddcba610112b105d4f7b6d2 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 284 3.9E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS06945 e3ba9bb507e71bb7092da2e27b48e817 418 SUPERFAMILY SSF54373 271 361 4.32E-10 T 09-03-2017 NA29_RS06945 e3ba9bb507e71bb7092da2e27b48e817 418 SUPERFAMILY SSF51905 361 414 2.85E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS06945 e3ba9bb507e71bb7092da2e27b48e817 418 SUPERFAMILY SSF51905 107 271 2.85E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS06945 e3ba9bb507e71bb7092da2e27b48e817 418 SUPERFAMILY SSF51905 1 54 2.85E-45 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS06945 e3ba9bb507e71bb7092da2e27b48e817 418 Pfam PF01266 FAD dependent oxidoreductase 2 399 8.2E-56 T 09-03-2017 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 NA29_RS06945 e3ba9bb507e71bb7092da2e27b48e817 418 Gene3D G3DSA:3.30.9.10 136 190 5.0E-8 T 09-03-2017 NA29_RS06945 e3ba9bb507e71bb7092da2e27b48e817 418 Gene3D G3DSA:3.30.9.10 271 358 5.0E-8 T 09-03-2017 NA29_RS06945 e3ba9bb507e71bb7092da2e27b48e817 418 Gene3D G3DSA:3.50.50.60 191 270 7.1E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS06945 e3ba9bb507e71bb7092da2e27b48e817 418 Gene3D G3DSA:3.50.50.60 2 58 7.1E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS06945 e3ba9bb507e71bb7092da2e27b48e817 418 Gene3D G3DSA:3.50.50.60 108 131 7.1E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS06945 e3ba9bb507e71bb7092da2e27b48e817 418 Gene3D G3DSA:3.50.50.60 361 414 7.1E-42 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS11130 2c0aab1749bfebb751d4086540a7742f 252 SUPERFAMILY SSF52096 1 249 1.69E-64 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS11130 2c0aab1749bfebb751d4086540a7742f 252 Gene3D G3DSA:3.90.226.10 1 247 1.5E-62 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS11130 2c0aab1749bfebb751d4086540a7742f 252 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 09-03-2017 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 NA29_RS11130 2c0aab1749bfebb751d4086540a7742f 252 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 206 8.4E-37 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS21900 8c6ba0501830ed2cd314d4a1ec9b2149 317 SUPERFAMILY SSF53807 45 314 6.38E-78 T 09-03-2017 NA29_RS21900 8c6ba0501830ed2cd314d4a1ec9b2149 317 PRINTS PR00691 Adhesin B signature 71 89 1.1E-21 T 09-03-2017 IPR006129 Adhesin B GO:0007155 NA29_RS21900 8c6ba0501830ed2cd314d4a1ec9b2149 317 PRINTS PR00691 Adhesin B signature 90 109 1.1E-21 T 09-03-2017 IPR006129 Adhesin B GO:0007155 NA29_RS21900 8c6ba0501830ed2cd314d4a1ec9b2149 317 PRINTS PR00691 Adhesin B signature 201 218 1.1E-21 T 09-03-2017 IPR006129 Adhesin B GO:0007155 NA29_RS21900 8c6ba0501830ed2cd314d4a1ec9b2149 317 PRINTS PR00691 Adhesin B signature 46 67 1.1E-21 T 09-03-2017 IPR006129 Adhesin B GO:0007155 NA29_RS21900 8c6ba0501830ed2cd314d4a1ec9b2149 317 PRINTS PR00691 Adhesin B signature 250 267 1.1E-21 T 09-03-2017 IPR006129 Adhesin B GO:0007155 NA29_RS21900 8c6ba0501830ed2cd314d4a1ec9b2149 317 PRINTS PR00691 Adhesin B signature 272 290 1.1E-21 T 09-03-2017 IPR006129 Adhesin B GO:0007155 NA29_RS21900 8c6ba0501830ed2cd314d4a1ec9b2149 317 PRINTS PR00690 Adhesin family signature 201 222 4.4E-22 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 NA29_RS21900 8c6ba0501830ed2cd314d4a1ec9b2149 317 PRINTS PR00690 Adhesin family signature 90 107 4.4E-22 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 NA29_RS21900 8c6ba0501830ed2cd314d4a1ec9b2149 317 PRINTS PR00690 Adhesin family signature 254 272 4.4E-22 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 NA29_RS21900 8c6ba0501830ed2cd314d4a1ec9b2149 317 PRINTS PR00690 Adhesin family signature 46 64 4.4E-22 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 NA29_RS21900 8c6ba0501830ed2cd314d4a1ec9b2149 317 PRINTS PR00690 Adhesin family signature 77 90 4.4E-22 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 NA29_RS21900 8c6ba0501830ed2cd314d4a1ec9b2149 317 PRINTS PR00690 Adhesin family signature 280 299 4.4E-22 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 NA29_RS21900 8c6ba0501830ed2cd314d4a1ec9b2149 317 Gene3D G3DSA:3.40.50.1980 41 194 2.5E-45 T 09-03-2017 NA29_RS21900 8c6ba0501830ed2cd314d4a1ec9b2149 317 Gene3D G3DSA:3.40.50.1980 195 314 7.0E-39 T 09-03-2017 NA29_RS21900 8c6ba0501830ed2cd314d4a1ec9b2149 317 Pfam PF01297 Zinc-uptake complex component A periplasmic 49 311 7.2E-75 T 09-03-2017 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 NA29_RS00860 3824a177a7f4bb12d046efd03ee01c33 87 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 7 80 4.6E-27 T 09-03-2017 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 NA29_RS00860 3824a177a7f4bb12d046efd03ee01c33 87 Pfam PF01313 Bacterial export proteins, family 3 6 74 7.4E-23 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NA29_RS00860 3824a177a7f4bb12d046efd03ee01c33 87 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 52 74 1.2E-24 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NA29_RS00860 3824a177a7f4bb12d046efd03ee01c33 87 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 37 52 1.2E-24 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NA29_RS00860 3824a177a7f4bb12d046efd03ee01c33 87 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 16 37 1.2E-24 T 09-03-2017 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 NA29_RS07925 837e98329eff34e8038ceaf3f1c93560 291 Gene3D G3DSA:3.40.50.1820 59 288 1.5E-60 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS07925 837e98329eff34e8038ceaf3f1c93560 291 Pfam PF01738 Dienelactone hydrolase family 64 288 1.9E-59 T 09-03-2017 IPR002925 Dienelactone hydrolase GO:0016787 NA29_RS07925 837e98329eff34e8038ceaf3f1c93560 291 SUPERFAMILY SSF53474 53 288 1.33E-45 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS00190 b945baf85255892ac67748137d644b19 277 SMART SM00062 36 260 4.2E-48 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS00190 b945baf85255892ac67748137d644b19 277 Gene3D G3DSA:3.40.190.10 219 260 2.0E-31 T 09-03-2017 NA29_RS00190 b945baf85255892ac67748137d644b19 277 Gene3D G3DSA:3.40.190.10 33 115 2.0E-31 T 09-03-2017 NA29_RS00190 b945baf85255892ac67748137d644b19 277 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 258 2.2E-46 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS00190 b945baf85255892ac67748137d644b19 277 SUPERFAMILY SSF53850 10 259 5.02E-52 T 09-03-2017 NA29_RS00190 b945baf85255892ac67748137d644b19 277 Gene3D G3DSA:3.40.190.10 116 214 1.3E-18 T 09-03-2017 NA29_RS05540 8990f9c1c63024520ce294528a30786e 151 Gene3D G3DSA:3.10.450.50 10 134 4.4E-13 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS05540 8990f9c1c63024520ce294528a30786e 151 Pfam PF13474 SnoaL-like domain 13 131 3.1E-16 T 09-03-2017 IPR009959 Polyketide cyclase SnoaL-like domain NA29_RS05540 8990f9c1c63024520ce294528a30786e 151 SUPERFAMILY SSF54427 8 132 2.7E-20 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS16045 48be68627ce819b89e2077004aaf21eb 179 Pfam PF11937 Protein of unknown function (DUF3455) 38 177 5.3E-32 T 09-03-2017 IPR021851 Protein of unknown function DUF3455 NA29_RS14470 a9205ada98aea4ba50823f8d2d8129d5 270 Gene3D G3DSA:3.40.50.300 2 216 3.8E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14470 a9205ada98aea4ba50823f8d2d8129d5 270 SUPERFAMILY SSF52540 23 234 3.34E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14470 a9205ada98aea4ba50823f8d2d8129d5 270 Pfam PF00005 ABC transporter 30 167 3.4E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS14470 a9205ada98aea4ba50823f8d2d8129d5 270 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS14470 a9205ada98aea4ba50823f8d2d8129d5 270 SMART SM00382 37 217 1.3E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS16475 221cfa7d581395e2066cbabbb3b07c67 337 SUPERFAMILY SSF48179 196 319 3.06E-29 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS16475 221cfa7d581395e2066cbabbb3b07c67 337 Gene3D G3DSA:1.10.1040.10 196 321 2.2E-29 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 NA29_RS16475 221cfa7d581395e2066cbabbb3b07c67 337 SUPERFAMILY SSF51735 1 159 1.43E-17 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16475 221cfa7d581395e2066cbabbb3b07c67 337 Gene3D G3DSA:3.40.50.720 1 194 7.8E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16475 221cfa7d581395e2066cbabbb3b07c67 337 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 104 6.0E-25 T 09-03-2017 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 NA29_RS16475 221cfa7d581395e2066cbabbb3b07c67 337 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 196 318 9.0E-25 T 09-03-2017 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 NA29_RS21565 11f745da61f69ba7b729b0c425a61b20 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 5.7E-22 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS21565 11f745da61f69ba7b729b0c425a61b20 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 38 5.7E-22 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS21565 11f745da61f69ba7b729b0c425a61b20 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 218 5.7E-22 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS21565 11f745da61f69ba7b729b0c425a61b20 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 199 5.7E-22 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS21565 11f745da61f69ba7b729b0c425a61b20 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 5.7E-22 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS21565 11f745da61f69ba7b729b0c425a61b20 260 Pfam PF00106 short chain dehydrogenase 21 212 1.5E-42 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS21565 11f745da61f69ba7b729b0c425a61b20 260 SUPERFAMILY SSF51735 19 257 2.25E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS21565 11f745da61f69ba7b729b0c425a61b20 260 Gene3D G3DSA:3.40.50.720 12 257 3.0E-59 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS21565 11f745da61f69ba7b729b0c425a61b20 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 1.1E-7 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS21565 11f745da61f69ba7b729b0c425a61b20 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 180 199 1.1E-7 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS21565 11f745da61f69ba7b729b0c425a61b20 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 158 1.1E-7 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS11035 f47188e5239ce7f655155878a210fb46 545 Pfam PF00672 HAMP domain 192 259 9.4E-16 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS11035 f47188e5239ce7f655155878a210fb46 545 SUPERFAMILY SSF58104 231 512 1.83E-70 T 09-03-2017 NA29_RS11035 f47188e5239ce7f655155878a210fb46 545 Gene3D G3DSA:1.10.287.950 278 483 2.9E-58 T 09-03-2017 NA29_RS11035 f47188e5239ce7f655155878a210fb46 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 510 4.3E-56 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS11035 f47188e5239ce7f655155878a210fb46 545 SMART SM00304 211 263 1.8E-13 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 NA29_RS11035 f47188e5239ce7f655155878a210fb46 545 SMART SM00283 264 511 9.7E-81 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS11035 f47188e5239ce7f655155878a210fb46 545 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 184 7.8E-22 T 09-03-2017 IPR024478 4HB MCP domain NA29_RS18915 79dc7de48df021f2670d6c956767761b 545 SUPERFAMILY SSF56235 5 545 5.02E-175 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS18915 79dc7de48df021f2670d6c956767761b 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 262 281 1.3E-43 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18915 79dc7de48df021f2670d6c956767761b 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 380 398 1.3E-43 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18915 79dc7de48df021f2670d6c956767761b 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 135 154 1.3E-43 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18915 79dc7de48df021f2670d6c956767761b 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 356 374 1.3E-43 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18915 79dc7de48df021f2670d6c956767761b 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 411 426 1.3E-43 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18915 79dc7de48df021f2670d6c956767761b 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 439 456 1.3E-43 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18915 79dc7de48df021f2670d6c956767761b 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 117 135 1.3E-43 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18915 79dc7de48df021f2670d6c956767761b 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 233 249 1.3E-43 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18915 79dc7de48df021f2670d6c956767761b 545 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 43 68 1.3E-43 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS18915 79dc7de48df021f2670d6c956767761b 545 Pfam PF01019 Gamma-glutamyltranspeptidase 36 540 1.0E-155 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS04840 d7939ee08f5bae9641b9f5e74ec69b37 630 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 132 597 1.9E-133 T 09-03-2017 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 NA29_RS04840 d7939ee08f5bae9641b9f5e74ec69b37 630 Pfam PF07549 SecD/SecF GG Motif 129 149 8.6E-6 T 09-03-2017 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site NA29_RS04840 d7939ee08f5bae9641b9f5e74ec69b37 630 Gene3D G3DSA:1.20.1640.10 442 608 2.3E-21 T 09-03-2017 NA29_RS04840 d7939ee08f5bae9641b9f5e74ec69b37 630 Pfam PF13721 SecD export protein N-terminal TM region 1 112 4.9E-36 T 09-03-2017 IPR027398 SecD export protein N-terminal TM domain NA29_RS04840 d7939ee08f5bae9641b9f5e74ec69b37 630 SUPERFAMILY SSF82866 407 604 4.58E-37 T 09-03-2017 NA29_RS04840 d7939ee08f5bae9641b9f5e74ec69b37 630 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 357 590 1.2E-69 T 09-03-2017 IPR022645 Protein-export membrane protein SecD/SecF, bacterial NA29_RS04840 d7939ee08f5bae9641b9f5e74ec69b37 630 Pfam PF02355 Protein export membrane protein 430 600 4.4E-21 T 09-03-2017 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial NA29_RS04840 d7939ee08f5bae9641b9f5e74ec69b37 630 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 611 48.073 T 09-03-2017 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 NA29_RS13845 a8613adfa44a98ef9ffa6ae7a2ee51ea 256 Gene3D G3DSA:3.40.1280.10 101 250 6.0E-52 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NA29_RS13845 a8613adfa44a98ef9ffa6ae7a2ee51ea 256 Pfam PF00588 SpoU rRNA Methylase family 103 243 2.2E-37 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 NA29_RS13845 a8613adfa44a98ef9ffa6ae7a2ee51ea 256 SUPERFAMILY SSF75217 93 250 6.54E-46 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases NA29_RS13845 a8613adfa44a98ef9ffa6ae7a2ee51ea 256 Gene3D G3DSA:3.30.1330.30 1 83 7.2E-18 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like NA29_RS13845 a8613adfa44a98ef9ffa6ae7a2ee51ea 256 SMART SM00967 6 88 5.3E-13 T 09-03-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 NA29_RS13845 a8613adfa44a98ef9ffa6ae7a2ee51ea 256 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 249 3.9E-69 T 09-03-2017 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 NA29_RS13845 a8613adfa44a98ef9ffa6ae7a2ee51ea 256 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 84 9.2E-13 T 09-03-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 NA29_RS13845 a8613adfa44a98ef9ffa6ae7a2ee51ea 256 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 250 43.151 T 09-03-2017 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB NA29_RS13845 a8613adfa44a98ef9ffa6ae7a2ee51ea 256 SUPERFAMILY SSF55315 2 84 1.65E-14 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like NA29_RS23090 a3ad3f52cfb0fb05f8d1c498334f689c 120 Pfam PF15586 Immunity protein 8 3 117 7.1E-40 T 09-03-2017 IPR028964 Immunity protein 8 NA29_RS00060 288d6c19a1544c7458a5d4a457e8002b 412 SUPERFAMILY SSF141130 15 164 7.32E-78 T 09-03-2017 NA29_RS00060 288d6c19a1544c7458a5d4a457e8002b 412 SUPERFAMILY SSF141130 213 383 7.32E-78 T 09-03-2017 NA29_RS00060 288d6c19a1544c7458a5d4a457e8002b 412 Pfam PF03069 Acetamidase/Formamidase family 7 384 3.8E-174 T 09-03-2017 IPR004304 Acetamidase/Formamidase GO:0016811 NA29_RS00060 288d6c19a1544c7458a5d4a457e8002b 412 Gene3D G3DSA:2.60.120.580 4 94 1.6E-64 T 09-03-2017 NA29_RS00060 288d6c19a1544c7458a5d4a457e8002b 412 Gene3D G3DSA:2.60.120.580 213 281 1.6E-64 T 09-03-2017 NA29_RS00060 288d6c19a1544c7458a5d4a457e8002b 412 Gene3D G3DSA:2.60.120.580 147 164 1.6E-64 T 09-03-2017 NA29_RS20655 32238baebbd04b792fead87cf108470f 177 Pfam PF02417 Chromate transporter 9 171 9.7E-33 T 09-03-2017 IPR003370 Chromate transporter GO:0015109|GO:0015703 NA29_RS07405 d7c963b6bad9dddd52a4211f6fbeb699 151 SUPERFAMILY SSF46785 4 144 1.96E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07405 d7c963b6bad9dddd52a4211f6fbeb699 151 Gene3D G3DSA:1.10.10.10 5 141 2.8E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS07405 d7c963b6bad9dddd52a4211f6fbeb699 151 SMART SM00347 31 131 5.3E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS07405 d7c963b6bad9dddd52a4211f6fbeb699 151 Pfam PF13463 Winged helix DNA-binding domain 38 104 1.6E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS25285 5eaa308a2dddee794b7018bcf0bf66f2 228 Pfam PF07947 YhhN-like protein 32 211 1.1E-39 T 09-03-2017 IPR012506 YhhN-like GO:0016021 NA29_RS01405 f2706116cfe005ebcccf677c6d578276 216 Gene3D G3DSA:1.10.3720.10 14 212 5.6E-37 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01405 f2706116cfe005ebcccf677c6d578276 216 SUPERFAMILY SSF161098 13 198 1.57E-36 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01405 f2706116cfe005ebcccf677c6d578276 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 212 2.9E-14 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01405 f2706116cfe005ebcccf677c6d578276 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 107 1.1E-27 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 Pfam PF13332 Haemagluttinin repeat 1937 2105 9.5E-41 T 09-03-2017 IPR025157 Haemagluttinin repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 Pfam PF13332 Haemagluttinin repeat 1531 1596 3.8E-5 T 09-03-2017 IPR025157 Haemagluttinin repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 Pfam PF13332 Haemagluttinin repeat 1410 1515 0.0044 T 09-03-2017 IPR025157 Haemagluttinin repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 Pfam PF13332 Haemagluttinin repeat 1701 1855 4.1E-16 T 09-03-2017 IPR025157 Haemagluttinin repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 SUPERFAMILY SSF51126 49 328 7.53E-62 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 SMART SM00912 60 181 9.0E-42 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 79 176 9.8E-20 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 Pfam PF05860 haemagglutination activity domain 44 177 5.9E-29 T 09-03-2017 IPR008638 Filamentous haemagglutinin, N-terminal NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 Gene3D G3DSA:2.160.20.10 48 337 3.0E-89 T 09-03-2017 IPR012334 Pectin lyase fold NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1408 1442 2.2 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 646 676 0.088 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 624 664 0.0015 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 494 535 1.1E-4 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 289 306 2.8 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 472 513 0.072 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 309 345 0.37 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 766 802 0.79 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 435 471 1.2 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1389 1428 1.2 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 566 599 0.0068 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 603 635 0.04 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 393 427 0.19 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 862 885 1.6 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 346 384 0.73 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 726 766 0.035 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 464 490 2.2 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 708 745 0.014 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 546 567 0.43 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03415 8a5815cff789684a9f848e750f921130 2802 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 335 362 0.15 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS03550 9997fb34057600305fde8b995a1d6427 319 Hamap MF_01653 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase [mhpB]. 1 312 54.688 T 09-03-2017 IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase GO:0005506|GO:0019439|GO:0047070|GO:0055114 KEGG: 00360+1.13.11.16|MetaCyc: PWY-6690 NA29_RS03550 9997fb34057600305fde8b995a1d6427 319 Gene3D G3DSA:3.40.830.10 7 187 6.7E-78 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS03550 9997fb34057600305fde8b995a1d6427 319 Gene3D G3DSA:3.40.830.10 231 311 6.7E-78 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS03550 9997fb34057600305fde8b995a1d6427 319 SUPERFAMILY SSF53213 6 185 5.62E-68 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS03550 9997fb34057600305fde8b995a1d6427 319 SUPERFAMILY SSF53213 229 308 5.62E-68 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS03550 9997fb34057600305fde8b995a1d6427 319 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 304 3.6E-57 T 09-03-2017 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 NA29_RS03685 fb6d68dbc30a85ad98e9ba44564c9065 168 SUPERFAMILY SSF55729 1 148 1.37E-29 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS03685 fb6d68dbc30a85ad98e9ba44564c9065 168 Gene3D G3DSA:3.40.630.30 1 131 9.0E-22 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS03685 fb6d68dbc30a85ad98e9ba44564c9065 168 Pfam PF13527 Acetyltransferase (GNAT) domain 5 129 4.9E-13 T 09-03-2017 NA29_RS22560 7fb45faaaddf4ea469e8ec2f8d03e100 266 SMART SM00062 43 266 4.5E-67 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS22560 7fb45faaaddf4ea469e8ec2f8d03e100 266 SUPERFAMILY SSF53850 6 265 2.59E-68 T 09-03-2017 NA29_RS22560 7fb45faaaddf4ea469e8ec2f8d03e100 266 SMART SM00079 43 265 0.0014 T 09-03-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 NA29_RS22560 7fb45faaaddf4ea469e8ec2f8d03e100 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 66 79 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 NA29_RS22560 7fb45faaaddf4ea469e8ec2f8d03e100 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 265 8.5E-66 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS22560 7fb45faaaddf4ea469e8ec2f8d03e100 266 Gene3D G3DSA:3.40.190.10 42 120 1.2E-43 T 09-03-2017 NA29_RS22560 7fb45faaaddf4ea469e8ec2f8d03e100 266 Gene3D G3DSA:3.40.190.10 226 265 1.2E-43 T 09-03-2017 NA29_RS22560 7fb45faaaddf4ea469e8ec2f8d03e100 266 Gene3D G3DSA:3.40.190.10 121 225 1.7E-23 T 09-03-2017 NA29_RS22735 cbe2d9633f6afed91769fd0233bdad09 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 2.7E-21 T 09-03-2017 NA29_RS22735 cbe2d9633f6afed91769fd0233bdad09 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 2.7E-21 T 09-03-2017 NA29_RS22735 cbe2d9633f6afed91769fd0233bdad09 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 2.7E-21 T 09-03-2017 NA29_RS22735 cbe2d9633f6afed91769fd0233bdad09 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 161 176 2.7E-21 T 09-03-2017 NA29_RS22735 cbe2d9633f6afed91769fd0233bdad09 395 SUPERFAMILY SSF51905 273 389 6.48E-55 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS22735 cbe2d9633f6afed91769fd0233bdad09 395 SUPERFAMILY SSF51905 11 182 6.48E-55 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS22735 cbe2d9633f6afed91769fd0233bdad09 395 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 300 313 - T 09-03-2017 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 NA29_RS22735 cbe2d9633f6afed91769fd0233bdad09 395 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 12 395 1.8E-121 T 09-03-2017 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 NA29_RS22735 cbe2d9633f6afed91769fd0233bdad09 395 Pfam PF01494 FAD binding domain 12 344 1.2E-29 T 09-03-2017 IPR002938 FAD-binding domain GO:0071949 NA29_RS22735 cbe2d9633f6afed91769fd0233bdad09 395 Gene3D G3DSA:3.50.50.60 11 187 2.1E-41 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS22735 cbe2d9633f6afed91769fd0233bdad09 395 Gene3D G3DSA:3.50.50.60 274 361 2.1E-41 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS01025 609592a5e71fede359fc45e853d16dde 577 SUPERFAMILY SSF52540 137 547 2.55E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01025 609592a5e71fede359fc45e853d16dde 577 Gene3D G3DSA:3.40.50.300 260 554 4.1E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS01025 609592a5e71fede359fc45e853d16dde 577 Pfam PF00437 Type II/IV secretion system protein 143 428 8.8E-36 T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 NA29_RS01025 609592a5e71fede359fc45e853d16dde 577 Gene3D G3DSA:3.30.450.90 119 251 5.2E-14 T 09-03-2017 NA29_RS15165 1e273e6ffc53381c529501c8c025a251 208 SUPERFAMILY SSF55821 1 203 1.01E-63 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain NA29_RS15165 1e273e6ffc53381c529501c8c025a251 208 Gene3D G3DSA:3.90.870.10 2 202 5.3E-64 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain NA29_RS15165 1e273e6ffc53381c529501c8c025a251 208 Pfam PF01300 Telomere recombination 23 198 4.0E-48 T 09-03-2017 IPR006070 YrdC-like domain GO:0003725 NA29_RS15165 1e273e6ffc53381c529501c8c025a251 208 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 4.5E-63 T 09-03-2017 IPR006070 YrdC-like domain GO:0003725 NA29_RS00055 105c49b8cb69e560e11c0f0a7fd51617 112 Pfam PF09723 Zinc ribbon domain 1 40 6.4E-13 T 09-03-2017 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain NA29_RS00055 105c49b8cb69e560e11c0f0a7fd51617 112 SMART SM00834 1 41 9.1E-16 T 09-03-2017 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain NA29_RS00055 105c49b8cb69e560e11c0f0a7fd51617 112 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 49 1.5E-17 T 09-03-2017 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain NA29_RS19415 3d2a4fa25e7da12a1278a5b878acce3f 305 SUPERFAMILY SSF103481 203 303 2.35E-12 T 09-03-2017 NA29_RS19415 3d2a4fa25e7da12a1278a5b878acce3f 305 Pfam PF00892 EamA-like transporter family 168 299 1.4E-13 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS19415 3d2a4fa25e7da12a1278a5b878acce3f 305 Pfam PF00892 EamA-like transporter family 27 154 2.4E-17 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS19415 3d2a4fa25e7da12a1278a5b878acce3f 305 SUPERFAMILY SSF103481 55 156 1.83E-11 T 09-03-2017 NA29_RS22860 33c588c0389614283d6292c7a5b39fbf 398 Pfam PF12536 Patatin phospholipase 278 383 4.0E-42 T 09-03-2017 IPR021095 Protein of unknown function DUF3734 NA29_RS22860 33c588c0389614283d6292c7a5b39fbf 398 SUPERFAMILY SSF52151 148 371 1.2E-52 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NA29_RS22860 33c588c0389614283d6292c7a5b39fbf 398 SUPERFAMILY SSF52151 25 98 1.2E-52 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NA29_RS22860 33c588c0389614283d6292c7a5b39fbf 398 Pfam PF01734 Patatin-like phospholipase 28 241 9.4E-21 T 09-03-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NA29_RS22860 33c588c0389614283d6292c7a5b39fbf 398 Gene3D G3DSA:3.40.1090.10 112 239 2.4E-11 T 09-03-2017 NA29_RS22860 33c588c0389614283d6292c7a5b39fbf 398 Gene3D G3DSA:3.40.1090.10 32 74 2.4E-11 T 09-03-2017 NA29_RS04500 540715ba3a5773f2a183275bf5829b31 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 225 9.0E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS04500 540715ba3a5773f2a183275bf5829b31 226 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 119 1.4E-24 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NA29_RS04500 540715ba3a5773f2a183275bf5829b31 226 SUPERFAMILY SSF161098 14 210 2.49E-40 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS04500 540715ba3a5773f2a183275bf5829b31 226 Gene3D G3DSA:1.10.3720.10 13 225 2.0E-46 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS10405 bca5a6d0efbda5dfac4bda91b5b5f560 264 Gene3D G3DSA:3.10.50.40 132 250 6.0E-43 T 09-03-2017 NA29_RS10405 bca5a6d0efbda5dfac4bda91b5b5f560 264 Pfam PF13616 PPIC-type PPIASE domain 130 225 4.2E-24 T 09-03-2017 NA29_RS10405 bca5a6d0efbda5dfac4bda91b5b5f560 264 SUPERFAMILY SSF54534 133 228 3.79E-31 T 09-03-2017 NA29_RS10405 bca5a6d0efbda5dfac4bda91b5b5f560 264 SUPERFAMILY SSF109998 29 164 4.71E-19 T 09-03-2017 IPR027304 Trigger factor/SurA domain NA29_RS07385 aaf22a6c1f674b57f820062d5f43fd96 243 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 240 1.3E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS07385 aaf22a6c1f674b57f820062d5f43fd96 243 SUPERFAMILY SSF161098 49 228 2.75E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS07385 aaf22a6c1f674b57f820062d5f43fd96 243 Gene3D G3DSA:1.10.3720.10 10 242 1.2E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS13790 d937d2a5ce7d05be664aaa69a22f67db 279 SUPERFAMILY SSF53218 1 209 1.44E-37 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS13790 d937d2a5ce7d05be664aaa69a22f67db 279 SMART SM00852 4 175 4.7E-30 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS13790 d937d2a5ce7d05be664aaa69a22f67db 279 Gene3D G3DSA:3.40.980.10 1 180 3.7E-31 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS13790 d937d2a5ce7d05be664aaa69a22f67db 279 Pfam PF00994 Probable molybdopterin binding domain 4 168 2.2E-27 T 09-03-2017 IPR001453 MoaB/Mog domain NA29_RS04785 8908a557caf6761b365c9e13e56f80ca 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 189 214 8.7E-67 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS04785 8908a557caf6761b365c9e13e56f80ca 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 69 8.7E-67 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS04785 8908a557caf6761b365c9e13e56f80ca 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 144 164 8.7E-67 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS04785 8908a557caf6761b365c9e13e56f80ca 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 165 186 8.7E-67 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS04785 8908a557caf6761b365c9e13e56f80ca 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 11 30 8.7E-67 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS04785 8908a557caf6761b365c9e13e56f80ca 216 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 30 50 8.7E-67 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS04785 8908a557caf6761b365c9e13e56f80ca 216 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 144 159 - T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS04785 8908a557caf6761b365c9e13e56f80ca 216 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 192 204 - T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS04785 8908a557caf6761b365c9e13e56f80ca 216 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 10 211 6.0E-84 T 09-03-2017 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 NA29_RS04785 8908a557caf6761b365c9e13e56f80ca 216 Pfam PF00813 FliP family 13 211 2.7E-62 T 09-03-2017 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 NA29_RS04025 8ed54472d3e9b1ae617d6dde40afa38e 555 Gene3D G3DSA:3.30.300.30 450 549 4.3E-29 T 09-03-2017 NA29_RS04025 8ed54472d3e9b1ae617d6dde40afa38e 555 Gene3D G3DSA:2.30.38.10 371 440 4.2E-25 T 09-03-2017 NA29_RS04025 8ed54472d3e9b1ae617d6dde40afa38e 555 Gene3D G3DSA:3.40.50.980 23 209 1.3E-37 T 09-03-2017 NA29_RS04025 8ed54472d3e9b1ae617d6dde40afa38e 555 SUPERFAMILY SSF56801 21 550 5.36E-139 T 09-03-2017 NA29_RS04025 8ed54472d3e9b1ae617d6dde40afa38e 555 Pfam PF00501 AMP-binding enzyme 30 451 7.4E-91 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS04025 8ed54472d3e9b1ae617d6dde40afa38e 555 Gene3D G3DSA:3.40.50.980 210 361 9.3E-33 T 09-03-2017 NA29_RS04025 8ed54472d3e9b1ae617d6dde40afa38e 555 ProSitePatterns PS00455 Putative AMP-binding domain signature. 205 216 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS04025 8ed54472d3e9b1ae617d6dde40afa38e 555 Pfam PF13193 AMP-binding enzyme C-terminal domain 460 528 6.9E-17 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS10705 04ec7cca5a2309c00abf6ae8a00cdc75 182 SUPERFAMILY SSF52218 3 178 3.88E-43 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS10705 04ec7cca5a2309c00abf6ae8a00cdc75 182 Gene3D G3DSA:3.40.50.360 2 181 3.8E-47 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS10705 04ec7cca5a2309c00abf6ae8a00cdc75 182 Pfam PF03358 NADPH-dependent FMN reductase 3 150 1.3E-32 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 NA29_RS03365 bf749c16ebdcd8dbad10de8d190b32c0 286 Pfam PF13468 Glyoxalase-like domain 9 186 1.8E-33 T 09-03-2017 IPR025870 Glyoxalase-like domain NA29_RS03365 bf749c16ebdcd8dbad10de8d190b32c0 286 SUPERFAMILY SSF54593 9 258 5.97E-18 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS03365 bf749c16ebdcd8dbad10de8d190b32c0 286 Gene3D G3DSA:3.10.180.10 9 106 1.5E-10 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS25415 ea8c440b08146c1aaa004f95d2a3b7d9 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 6.7E-24 T 09-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS25415 ea8c440b08146c1aaa004f95d2a3b7d9 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 09-03-2017 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS25415 ea8c440b08146c1aaa004f95d2a3b7d9 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 24 6.0E-6 T 09-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS25415 ea8c440b08146c1aaa004f95d2a3b7d9 44 Pfam PF00468 Ribosomal protein L34 1 44 4.0E-23 T 09-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS25415 ea8c440b08146c1aaa004f95d2a3b7d9 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.439 T 09-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS10935 bd61e7876435e26a9ad5431390b84b1c 331 SUPERFAMILY SSF53850 93 299 7.6E-34 T 09-03-2017 NA29_RS10935 bd61e7876435e26a9ad5431390b84b1c 331 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.6E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10935 bd61e7876435e26a9ad5431390b84b1c 331 Gene3D G3DSA:1.10.10.10 2 83 2.1E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10935 bd61e7876435e26a9ad5431390b84b1c 331 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.0E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10935 bd61e7876435e26a9ad5431390b84b1c 331 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.0E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10935 bd61e7876435e26a9ad5431390b84b1c 331 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.0E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS10935 bd61e7876435e26a9ad5431390b84b1c 331 SUPERFAMILY SSF46785 3 83 5.85E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS10935 bd61e7876435e26a9ad5431390b84b1c 331 Pfam PF03466 LysR substrate binding domain 92 295 1.2E-33 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS10935 bd61e7876435e26a9ad5431390b84b1c 331 Gene3D G3DSA:3.40.190.10 181 262 2.3E-19 T 09-03-2017 NA29_RS10935 bd61e7876435e26a9ad5431390b84b1c 331 Gene3D G3DSA:3.40.190.10 95 180 3.0E-23 T 09-03-2017 NA29_RS20180 85dfde88c75d988bb5f72e98be2b89f3 932 Pfam PF16967 Fimbrial, FimD or usher-like 295 361 1.7E-20 T 09-03-2017 IPR032636 Pilus assembly protein domain NA29_RS20180 85dfde88c75d988bb5f72e98be2b89f3 932 Pfam PF15976 CS1-pili formation C-terminal 797 887 9.3E-16 T 09-03-2017 IPR031917 Pilus assembly protein, C-terminal domain NA29_RS14570 40685d605f65f712834c50cc39b1436d 351 PIRSF PIRSF002825 6 351 9.7E-83 T 09-03-2017 IPR026045 Ferric binding protein NA29_RS14570 40685d605f65f712834c50cc39b1436d 351 Gene3D G3DSA:3.40.190.10 11 132 2.9E-26 T 09-03-2017 NA29_RS14570 40685d605f65f712834c50cc39b1436d 351 Gene3D G3DSA:3.40.190.10 282 319 2.9E-26 T 09-03-2017 NA29_RS14570 40685d605f65f712834c50cc39b1436d 351 Gene3D G3DSA:3.40.190.10 136 281 6.1E-54 T 09-03-2017 NA29_RS14570 40685d605f65f712834c50cc39b1436d 351 SUPERFAMILY SSF53850 33 346 1.95E-75 T 09-03-2017 NA29_RS14570 40685d605f65f712834c50cc39b1436d 351 Pfam PF13343 Bacterial extracellular solute-binding protein 81 316 4.9E-24 T 09-03-2017 NA29_RS10145 2c0fc8ef34002ff6be062c2de40d10fe 146 TIGRFAM TIGR02695 azurin: azurin 21 144 1.5E-46 T 09-03-2017 IPR014068 Azurin, proteobacteria NA29_RS10145 2c0fc8ef34002ff6be062c2de40d10fe 146 SUPERFAMILY SSF49503 21 145 1.09E-34 T 09-03-2017 IPR008972 Cupredoxin NA29_RS10145 2c0fc8ef34002ff6be062c2de40d10fe 146 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 25 144 8.0E-33 T 09-03-2017 NA29_RS10145 2c0fc8ef34002ff6be062c2de40d10fe 146 Gene3D G3DSA:2.60.40.420 20 145 6.9E-42 T 09-03-2017 IPR008972 Cupredoxin NA29_RS10145 2c0fc8ef34002ff6be062c2de40d10fe 146 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 21 145 3.5E-19 T 09-03-2017 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 NA29_RS10145 2c0fc8ef34002ff6be062c2de40d10fe 146 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 123 139 - T 09-03-2017 IPR028871 Blue (type 1) copper protein, binding site NA29_RS11095 07d1095f3dea66497425e24e1fa9aba9 171 Pfam PF11158 Protein of unknown function (DUF2938) 11 159 1.6E-63 T 09-03-2017 IPR021329 Protein of unknown function DUF2938 NA29_RS09275 76fa68412fc77d2bd1582fb780c9cd42 367 Gene3D G3DSA:3.60.150.10 9 356 1.2E-154 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 NA29_RS09275 76fa68412fc77d2bd1582fb780c9cd42 367 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 09-03-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 NA29_RS09275 76fa68412fc77d2bd1582fb780c9cd42 367 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 36.105 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 NA29_RS09275 76fa68412fc77d2bd1582fb780c9cd42 367 PIRSF PIRSF001456 3 360 8.4E-137 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 NA29_RS09275 76fa68412fc77d2bd1582fb780c9cd42 367 Pfam PF01264 Chorismate synthase 10 345 1.1E-135 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 NA29_RS09275 76fa68412fc77d2bd1582fb780c9cd42 367 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 4.5E-139 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 NA29_RS09275 76fa68412fc77d2bd1582fb780c9cd42 367 SUPERFAMILY SSF103263 4 353 2.62E-145 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 NA29_RS09275 76fa68412fc77d2bd1582fb780c9cd42 367 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 09-03-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 NA29_RS09275 76fa68412fc77d2bd1582fb780c9cd42 367 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 09-03-2017 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 NA29_RS21625 6ab8867a6f789849e347393f633a2e17 384 Pfam PF13477 Glycosyl transferase 4-like 9 144 9.1E-19 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 NA29_RS21625 6ab8867a6f789849e347393f633a2e17 384 Pfam PF13692 Glycosyl transferases group 1 203 339 5.3E-22 T 09-03-2017 NA29_RS21625 6ab8867a6f789849e347393f633a2e17 384 Gene3D G3DSA:3.40.50.2000 198 357 6.8E-20 T 09-03-2017 NA29_RS21625 6ab8867a6f789849e347393f633a2e17 384 SUPERFAMILY SSF53756 20 378 6.63E-58 T 09-03-2017 NA29_RS21775 886e6517de7df3aa5a094699ead4e638 579 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 393 561 4.2E-17 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS21775 886e6517de7df3aa5a094699ead4e638 579 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 255 1.2E-13 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS21775 886e6517de7df3aa5a094699ead4e638 579 Gene3D G3DSA:1.10.3720.10 64 258 9.7E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS21775 886e6517de7df3aa5a094699ead4e638 579 Gene3D G3DSA:1.10.3720.10 376 565 1.7E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS21775 886e6517de7df3aa5a094699ead4e638 579 SUPERFAMILY SSF161098 374 564 3.01E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS21775 886e6517de7df3aa5a094699ead4e638 579 SUPERFAMILY SSF161098 64 258 8.37E-21 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS07450 1d1355757ec9e67c91d4d3a4c63a2575 435 Gene3D G3DSA:1.20.1250.20 248 431 2.5E-21 T 09-03-2017 NA29_RS07450 1d1355757ec9e67c91d4d3a4c63a2575 435 SUPERFAMILY SSF103473 17 432 1.01E-80 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS07450 1d1355757ec9e67c91d4d3a4c63a2575 435 Pfam PF07690 Major Facilitator Superfamily 33 393 6.8E-43 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS07450 1d1355757ec9e67c91d4d3a4c63a2575 435 Gene3D G3DSA:1.20.1250.20 22 224 5.5E-42 T 09-03-2017 NA29_RS23720 62d6482b661a67a37c5525ce87b846a1 332 Gene3D G3DSA:3.20.20.70 4 330 6.4E-150 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS23720 62d6482b661a67a37c5525ce87b846a1 332 PIRSF PIRSF001415 1 331 5.6E-149 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS23720 62d6482b661a67a37c5525ce87b846a1 332 SUPERFAMILY SSF51569 3 329 3.52E-144 T 09-03-2017 NA29_RS23720 62d6482b661a67a37c5525ce87b846a1 332 SMART SM01004 4 328 1.6E-239 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS23720 62d6482b661a67a37c5525ce87b846a1 332 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 247 259 - T 09-03-2017 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS23720 62d6482b661a67a37c5525ce87b846a1 332 Pfam PF00490 Delta-aminolevulinic acid dehydratase 8 326 5.6E-140 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS23720 62d6482b661a67a37c5525ce87b846a1 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 247 263 2.2E-58 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS23720 62d6482b661a67a37c5525ce87b846a1 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 272 287 2.2E-58 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS23720 62d6482b661a67a37c5525ce87b846a1 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 193 212 2.2E-58 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS23720 62d6482b661a67a37c5525ce87b846a1 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 124 138 2.2E-58 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS23720 62d6482b661a67a37c5525ce87b846a1 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 302 321 2.2E-58 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS23720 62d6482b661a67a37c5525ce87b846a1 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 155 174 2.2E-58 T 09-03-2017 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 NA29_RS19390 15e838e23202baf53fe36eae57d046da 93 Pfam PF06803 Protein of unknown function (DUF1232) 34 66 1.0E-11 T 09-03-2017 IPR010652 Protein of unknown function DUF1232 NA29_RS20065 ef27ac8161ec9c2cf3e8b6d8aada3207 238 SMART SM00471 59 196 2.9E-7 T 09-03-2017 IPR003607 HD/PDEase domain NA29_RS20065 ef27ac8161ec9c2cf3e8b6d8aada3207 238 Gene3D G3DSA:1.10.3210.10 59 227 4.3E-18 T 09-03-2017 IPR006674 HD domain NA29_RS20065 ef27ac8161ec9c2cf3e8b6d8aada3207 238 Pfam PF13487 HD domain 114 177 2.6E-16 T 09-03-2017 NA29_RS20065 ef27ac8161ec9c2cf3e8b6d8aada3207 238 SUPERFAMILY SSF109604 49 224 1.0E-35 T 09-03-2017 NA29_RS19745 6bb5e1aea67d0184864ef334e31a94d6 170 SUPERFAMILY SSF46689 20 69 8.51E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS19745 6bb5e1aea67d0184864ef334e31a94d6 170 Pfam PF12833 Helix-turn-helix domain 42 120 1.2E-23 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS19745 6bb5e1aea67d0184864ef334e31a94d6 170 SUPERFAMILY SSF46689 72 124 2.46E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS19745 6bb5e1aea67d0184864ef334e31a94d6 170 Gene3D G3DSA:1.10.10.60 74 122 2.2E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS19745 6bb5e1aea67d0184864ef334e31a94d6 170 SMART SM00342 36 119 7.1E-29 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS19745 6bb5e1aea67d0184864ef334e31a94d6 170 Gene3D G3DSA:1.10.10.60 20 73 1.3E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS09240 96f07a9fa2ce5c21ef80e0da66384039 195 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 09-03-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 NA29_RS09240 96f07a9fa2ce5c21ef80e0da66384039 195 Gene3D G3DSA:3.40.50.360 1 194 4.7E-65 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS09240 96f07a9fa2ce5c21ef80e0da66384039 195 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 193 2.0E-40 T 09-03-2017 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 NA29_RS09240 96f07a9fa2ce5c21ef80e0da66384039 195 SUPERFAMILY SSF52218 1 193 8.78E-57 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS09240 96f07a9fa2ce5c21ef80e0da66384039 195 Pfam PF03358 NADPH-dependent FMN reductase 12 130 1.9E-6 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 NA29_RS07560 72e73c088f7d9d87a2605a144b7dc261 242 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 6 207 4.1E-41 T 09-03-2017 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 NA29_RS07560 72e73c088f7d9d87a2605a144b7dc261 242 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 168 1.3E-8 T 09-03-2017 IPR023214 HAD-like domain NA29_RS07560 72e73c088f7d9d87a2605a144b7dc261 242 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 140 156 4.0E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS07560 72e73c088f7d9d87a2605a144b7dc261 242 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 4.0E-5 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 NA29_RS07560 72e73c088f7d9d87a2605a144b7dc261 242 Gene3D G3DSA:3.40.50.1000 5 232 5.5E-29 T 09-03-2017 IPR023214 HAD-like domain NA29_RS07560 72e73c088f7d9d87a2605a144b7dc261 242 SUPERFAMILY SSF56784 5 234 5.67E-38 T 09-03-2017 IPR023214 HAD-like domain NA29_RS15305 329074e544677607855f5b0bafd42813 404 Pfam PF09594 Protein of unknown function (DUF2029) 86 311 1.0E-30 T 09-03-2017 IPR018584 Glycosyltransferase family 87 GO:0016758 NA29_RS07440 645860300e38ba58ad0716181c0a6fdf 167 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 48 56 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NA29_RS07440 645860300e38ba58ad0716181c0a6fdf 167 SUPERFAMILY SSF47741 93 162 2.75E-29 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS07440 645860300e38ba58ad0716181c0a6fdf 167 SUPERFAMILY SSF54292 11 87 8.78E-22 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS07440 645860300e38ba58ad0716181c0a6fdf 167 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 68 3.7E-7 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS07440 645860300e38ba58ad0716181c0a6fdf 167 Gene3D G3DSA:1.10.150.120 84 163 2.8E-31 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS07440 645860300e38ba58ad0716181c0a6fdf 167 Gene3D G3DSA:3.10.20.30 10 83 7.5E-27 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS07440 645860300e38ba58ad0716181c0a6fdf 167 Pfam PF01799 [2Fe-2S] binding domain 82 154 2.0E-26 T 09-03-2017 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 359 8.5E-102 T 09-03-2017 IPR028053 Membrane insertase YidC, N-terminal NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 Pfam PF14849 YidC periplasmic domain 80 350 6.1E-80 T 09-03-2017 IPR028053 Membrane insertase YidC, N-terminal NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 PRINTS PR01900 YidC translocation/secretion protein signature 475 490 5.4E-25 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 PRINTS PR01900 YidC translocation/secretion protein signature 346 362 5.4E-25 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 PRINTS PR01900 YidC translocation/secretion protein signature 494 518 5.4E-25 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 360 539 4.8E-72 T 09-03-2017 IPR028055 Membrane insertase YidC/Oxa1, C-terminal NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 PRINTS PR00701 60kDa inner membrane protein signature 258 273 5.4E-71 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 PRINTS PR00701 60kDa inner membrane protein signature 469 491 5.4E-71 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 PRINTS PR00701 60kDa inner membrane protein signature 85 106 5.4E-71 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 PRINTS PR00701 60kDa inner membrane protein signature 170 190 5.4E-71 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 PRINTS PR00701 60kDa inner membrane protein signature 505 528 5.4E-71 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 PRINTS PR00701 60kDa inner membrane protein signature 223 241 5.4E-71 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 PRINTS PR00701 60kDa inner membrane protein signature 331 351 5.4E-71 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 PRINTS PR00701 60kDa inner membrane protein signature 2 23 5.4E-71 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 PRINTS PR00701 60kDa inner membrane protein signature 422 445 5.4E-71 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 541 23.93 T 09-03-2017 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 NA29_RS25400 0e8a1b1f7e5d0dc9d38de482a38b8f5a 550 Pfam PF02096 60Kd inner membrane protein 361 539 7.4E-62 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 NA29_RS23920 4a42452e1b3da83ed6d34e325bf8e186 132 PIRSF PIRSF004638 1 132 1.8E-22 T 09-03-2017 IPR005265 Uncharacterised protein family UPF0093 NA29_RS23920 4a42452e1b3da83ed6d34e325bf8e186 132 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 132 3.4E-18 T 09-03-2017 IPR005265 Uncharacterised protein family UPF0093 NA29_RS00610 e22a2840a6dcb601140399b22b6719fc 750 SUPERFAMILY SSF56935 52 750 1.43E-126 T 09-03-2017 NA29_RS00610 e22a2840a6dcb601140399b22b6719fc 750 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 91 750 1.1E-90 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NA29_RS00610 e22a2840a6dcb601140399b22b6719fc 750 Gene3D G3DSA:2.170.130.10 72 194 1.6E-34 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS00610 e22a2840a6dcb601140399b22b6719fc 750 Gene3D G3DSA:2.40.170.20 201 750 4.0E-134 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS00610 e22a2840a6dcb601140399b22b6719fc 750 Pfam PF00593 TonB dependent receptor 520 749 4.1E-31 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS00610 e22a2840a6dcb601140399b22b6719fc 750 Pfam PF07715 TonB-dependent Receptor Plug Domain 90 187 3.0E-20 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS18055 47f6a6c77dde8c6d18abf5668dcd401d 349 Gene3D G3DSA:3.40.50.300 1 204 3.9E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS18055 47f6a6c77dde8c6d18abf5668dcd401d 349 Pfam PF05707 Zonular occludens toxin (Zot) 3 206 8.7E-27 T 09-03-2017 IPR008900 Zona occludens toxin NA29_RS20240 40f93e593df6d538a77670f12eb2c030 294 SUPERFAMILY SSF161098 30 288 7.85E-59 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS20240 40f93e593df6d538a77670f12eb2c030 294 Gene3D G3DSA:1.10.3720.10 29 283 3.2E-53 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS20240 40f93e593df6d538a77670f12eb2c030 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 288 1.9E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS14050 eaacf6dc757afc999c7d0648a9affd15 89 SUPERFAMILY SSF54285 3 89 1.07E-13 T 09-03-2017 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp NA29_RS14050 eaacf6dc757afc999c7d0648a9affd15 89 Gene3D G3DSA:3.10.20.30 3 86 6.0E-15 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS11320 38c1e2fd347c5ac1a4336930a7b6880d 307 SMART SM01130 5 302 3.1E-66 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS11320 38c1e2fd347c5ac1a4336930a7b6880d 307 PIRSF PIRSF001365 4 304 2.7E-48 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS11320 38c1e2fd347c5ac1a4336930a7b6880d 307 Pfam PF00701 Dihydrodipicolinate synthetase family 6 299 1.3E-36 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 NA29_RS11320 38c1e2fd347c5ac1a4336930a7b6880d 307 Gene3D G3DSA:3.20.20.70 4 303 3.2E-67 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS11320 38c1e2fd347c5ac1a4336930a7b6880d 307 SUPERFAMILY SSF51569 6 302 1.26E-64 T 09-03-2017 NA29_RS14375 d2b1c8d4944999d2cb4c2087d02714af 451 SUPERFAMILY SSF117892 180 300 3.27E-21 T 09-03-2017 IPR001107 Band 7 domain NA29_RS14375 d2b1c8d4944999d2cb4c2087d02714af 451 Pfam PF01145 SPFH domain / Band 7 family 128 313 1.2E-26 T 09-03-2017 IPR001107 Band 7 domain NA29_RS14375 d2b1c8d4944999d2cb4c2087d02714af 451 SMART SM00244 124 297 4.5E-23 T 09-03-2017 IPR001107 Band 7 domain NA29_RS14375 d2b1c8d4944999d2cb4c2087d02714af 451 Pfam PF12221 Bacterial membrane protein N terminal 14 86 4.8E-9 T 09-03-2017 IPR020980 Menbrane protein HflK, N-terminal NA29_RS14375 d2b1c8d4944999d2cb4c2087d02714af 451 TIGRFAM TIGR01933 hflK: HflK protein 126 398 5.9E-88 T 09-03-2017 IPR010201 HflK GO:0016021 NA29_RS04735 309f6f05abc2a6db5dabc0c6b83d66b1 442 TIGRFAM TIGR02500 type_III_yscD: type III secretion apparatus protein, YscD/HrpQ family 4 425 1.5E-44 T 09-03-2017 IPR012843 Type III secretion system YscD/HrpQ NA29_RS18740 98b499856f390c1bb17f5ec0885f8b9e 495 Pfam PF03606 C4-dicarboxylate anaerobic carrier 40 490 1.5E-71 T 09-03-2017 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 NA29_RS12195 0bb0c764a7248c96adf3a0a12bd108a1 424 Gene3D G3DSA:3.40.50.1100 82 192 1.9E-22 T 09-03-2017 NA29_RS12195 0bb0c764a7248c96adf3a0a12bd108a1 424 SUPERFAMILY SSF53686 42 403 2.1E-62 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS12195 0bb0c764a7248c96adf3a0a12bd108a1 424 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 47 404 8.2E-98 T 09-03-2017 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 NA29_RS12195 0bb0c764a7248c96adf3a0a12bd108a1 424 Gene3D G3DSA:3.40.50.1100 193 406 2.1E-18 T 09-03-2017 NA29_RS12195 0bb0c764a7248c96adf3a0a12bd108a1 424 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 47 378 7.7E-62 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS10470 276663487791d0efb9b51eb429bc90f1 146 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 10 121 4.7E-22 T 09-03-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 NA29_RS10470 276663487791d0efb9b51eb429bc90f1 146 Gene3D G3DSA:3.10.129.10 7 126 1.0E-33 T 09-03-2017 IPR029069 HotDog domain NA29_RS10470 276663487791d0efb9b51eb429bc90f1 146 SUPERFAMILY SSF54637 4 124 3.45E-31 T 09-03-2017 IPR029069 HotDog domain NA29_RS10470 276663487791d0efb9b51eb429bc90f1 146 Pfam PF03061 Thioesterase superfamily 42 116 7.3E-12 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 305 2.6E-63 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 Gene3D G3DSA:3.50.50.60 5 107 3.7E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.7E-25 T 09-03-2017 NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 282 3.7E-25 T 09-03-2017 NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 3.7E-25 T 09-03-2017 NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 3.7E-25 T 09-03-2017 NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 3.7E-25 T 09-03-2017 NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 SUPERFAMILY SSF51905 148 314 1.94E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 SUPERFAMILY SSF51905 6 190 8.39E-48 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 SUPERFAMILY SSF55424 319 414 1.65E-25 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 282 9.0E-18 T 09-03-2017 NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 9.0E-18 T 09-03-2017 NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 9.0E-18 T 09-03-2017 NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 9.0E-18 T 09-03-2017 NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 Gene3D G3DSA:3.30.390.30 325 412 2.0E-28 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 Pfam PF14759 Reductase C-terminal 325 412 4.5E-28 T 09-03-2017 IPR028202 Reductase, C-terminal NA29_RS10795 f6260afc7406cf2e178664bf2e51dc2f 416 Gene3D G3DSA:3.50.50.60 108 314 4.5E-48 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS08095 9144ac3891b92cb9ddb107dd9d34f524 269 SUPERFAMILY SSF55781 80 262 1.96E-31 T 09-03-2017 IPR029016 GAF domain-like NA29_RS08095 9144ac3891b92cb9ddb107dd9d34f524 269 Gene3D G3DSA:3.30.450.40 88 264 3.2E-37 T 09-03-2017 IPR029016 GAF domain-like NA29_RS08095 9144ac3891b92cb9ddb107dd9d34f524 269 Pfam PF01614 Bacterial transcriptional regulator 131 252 1.6E-8 T 09-03-2017 IPR014757 Transcription regulator IclR, C-terminal NA29_RS08095 9144ac3891b92cb9ddb107dd9d34f524 269 SMART SM00346 13 103 9.4E-11 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS08095 9144ac3891b92cb9ddb107dd9d34f524 269 Gene3D G3DSA:1.10.10.10 11 87 1.6E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS08095 9144ac3891b92cb9ddb107dd9d34f524 269 Pfam PF09339 IclR helix-turn-helix domain 19 65 1.7E-8 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS08095 9144ac3891b92cb9ddb107dd9d34f524 269 SUPERFAMILY SSF46785 13 87 5.69E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19200 139cb25d905e310cc7202b28dd0de5c0 317 Gene3D G3DSA:1.10.10.10 3 86 2.9E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19200 139cb25d905e310cc7202b28dd0de5c0 317 Gene3D G3DSA:3.40.190.10 174 272 3.6E-23 T 09-03-2017 NA29_RS19200 139cb25d905e310cc7202b28dd0de5c0 317 SUPERFAMILY SSF53850 91 299 3.06E-39 T 09-03-2017 NA29_RS19200 139cb25d905e310cc7202b28dd0de5c0 317 Pfam PF03466 LysR substrate binding domain 97 283 2.5E-23 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS19200 139cb25d905e310cc7202b28dd0de5c0 317 Gene3D G3DSA:3.40.190.10 91 173 4.5E-27 T 09-03-2017 NA29_RS19200 139cb25d905e310cc7202b28dd0de5c0 317 Gene3D G3DSA:3.40.190.10 276 303 4.5E-27 T 09-03-2017 NA29_RS19200 139cb25d905e310cc7202b28dd0de5c0 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 9.5E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19200 139cb25d905e310cc7202b28dd0de5c0 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.3E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19200 139cb25d905e310cc7202b28dd0de5c0 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.3E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19200 139cb25d905e310cc7202b28dd0de5c0 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.3E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS19200 139cb25d905e310cc7202b28dd0de5c0 317 SUPERFAMILY SSF46785 6 86 8.16E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14425 d281e78604a70ee1b6f83b33c298c167 141 Pfam PF00334 Nucleoside diphosphate kinase 4 135 2.1E-54 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NA29_RS14425 d281e78604a70ee1b6f83b33c298c167 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.2E-38 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NA29_RS14425 d281e78604a70ee1b6f83b33c298c167 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.2E-38 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NA29_RS14425 d281e78604a70ee1b6f83b33c298c167 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.2E-38 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NA29_RS14425 d281e78604a70ee1b6f83b33c298c167 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.2E-38 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NA29_RS14425 d281e78604a70ee1b6f83b33c298c167 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.2E-38 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NA29_RS14425 d281e78604a70ee1b6f83b33c298c167 141 SUPERFAMILY SSF54919 1 139 2.62E-56 T 09-03-2017 NA29_RS14425 d281e78604a70ee1b6f83b33c298c167 141 Gene3D G3DSA:3.30.70.141 1 138 6.9E-58 T 09-03-2017 NA29_RS14425 d281e78604a70ee1b6f83b33c298c167 141 SMART SM00562 3 140 1.1E-79 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NA29_RS14425 d281e78604a70ee1b6f83b33c298c167 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.332 T 09-03-2017 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 NA29_RS05600 fb215867019e8e2f8e08936f479864d3 397 SUPERFAMILY SSF56059 110 312 2.83E-56 T 09-03-2017 NA29_RS05600 fb215867019e8e2f8e08936f479864d3 397 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 15 380 4.0E-112 T 09-03-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 NA29_RS05600 fb215867019e8e2f8e08936f479864d3 397 Gene3D G3DSA:3.30.1490.20 125 190 1.5E-16 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 NA29_RS05600 fb215867019e8e2f8e08936f479864d3 397 SUPERFAMILY SSF51246 315 387 1.8E-15 T 09-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 NA29_RS05600 fb215867019e8e2f8e08936f479864d3 397 Pfam PF02222 ATP-grasp domain 119 292 1.1E-46 T 09-03-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type NA29_RS05600 fb215867019e8e2f8e08936f479864d3 397 Gene3D G3DSA:3.40.50.20 9 118 3.7E-33 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS05600 fb215867019e8e2f8e08936f479864d3 397 SUPERFAMILY SSF52440 9 107 5.75E-25 T 09-03-2017 IPR016185 Pre-ATP-grasp domain NA29_RS05600 fb215867019e8e2f8e08936f479864d3 397 Gene3D G3DSA:3.30.470.20 193 389 2.6E-68 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 NA29_RS05600 fb215867019e8e2f8e08936f479864d3 397 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 14 377 41.008 T 09-03-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 NA29_RS19355 f4ef7326d03fc707add31c0bbf3c5aff 339 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 312 5.2E-78 T 09-03-2017 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 NA29_RS19355 f4ef7326d03fc707add31c0bbf3c5aff 339 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 38 294 1.7E-73 T 09-03-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 NA29_RS19355 f4ef7326d03fc707add31c0bbf3c5aff 339 PIRSF PIRSF006470 4 336 3.0E-79 T 09-03-2017 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 NA29_RS19355 f4ef7326d03fc707add31c0bbf3c5aff 339 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 30 1.6E-4 T 09-03-2017 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal NA29_RS08190 46744701ea4b5ec1544b9005549ccd53 430 Gene3D G3DSA:1.20.1250.20 245 413 4.2E-13 T 09-03-2017 NA29_RS08190 46744701ea4b5ec1544b9005549ccd53 430 Gene3D G3DSA:1.20.1250.20 42 218 1.6E-17 T 09-03-2017 NA29_RS08190 46744701ea4b5ec1544b9005549ccd53 430 Pfam PF07690 Major Facilitator Superfamily 51 348 6.5E-27 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS08190 46744701ea4b5ec1544b9005549ccd53 430 SUPERFAMILY SSF103473 41 420 2.49E-51 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS24460 86229abb5318363df740efa606e7b199 157 SUPERFAMILY SSF52833 2 144 1.07E-26 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS24460 86229abb5318363df740efa606e7b199 157 Gene3D G3DSA:3.40.30.10 2 151 1.4E-32 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS24460 86229abb5318363df740efa606e7b199 157 Pfam PF08534 Redoxin 22 144 4.2E-15 T 09-03-2017 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 NA29_RS02660 4364067489f0be398445bf75f9659517 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 34.962 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 NA29_RS02660 4364067489f0be398445bf75f9659517 164 Pfam PF01467 Cytidylyltransferase-like 5 133 1.7E-18 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NA29_RS02660 4364067489f0be398445bf75f9659517 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 5.6E-47 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 NA29_RS02660 4364067489f0be398445bf75f9659517 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 5.6E-47 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 NA29_RS02660 4364067489f0be398445bf75f9659517 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 5.6E-47 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 NA29_RS02660 4364067489f0be398445bf75f9659517 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 5.6E-47 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 NA29_RS02660 4364067489f0be398445bf75f9659517 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 5.6E-47 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 NA29_RS02660 4364067489f0be398445bf75f9659517 164 Gene3D G3DSA:3.40.50.620 2 157 1.1E-53 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS02660 4364067489f0be398445bf75f9659517 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 58 1.1E-16 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NA29_RS02660 4364067489f0be398445bf75f9659517 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 155 2.1E-55 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 NA29_RS02660 4364067489f0be398445bf75f9659517 164 SUPERFAMILY SSF52374 1 155 1.64E-44 T 09-03-2017 NA29_RS10085 edd226ef244cea1b2294080ca6c96540 291 Gene3D G3DSA:1.10.600.10 18 290 3.1E-52 T 09-03-2017 IPR008949 Isoprenoid synthase domain NA29_RS10085 edd226ef244cea1b2294080ca6c96540 291 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 28 290 3.2E-84 T 09-03-2017 IPR017828 Squalene/phytoene synthase HpnD GO:0016117|GO:0016767 NA29_RS10085 edd226ef244cea1b2294080ca6c96540 291 Pfam PF00494 Squalene/phytoene synthase 35 281 9.2E-51 T 09-03-2017 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 NA29_RS10085 edd226ef244cea1b2294080ca6c96540 291 SUPERFAMILY SSF48576 22 290 1.18E-58 T 09-03-2017 IPR008949 Isoprenoid synthase domain NA29_RS13515 a8a727232a3298171b703087e8281f0b 308 SUPERFAMILY SSF50486 213 301 2.83E-18 T 09-03-2017 IPR011034 Formyl transferase, C-terminal-like GO:0003824 NA29_RS13515 a8a727232a3298171b703087e8281f0b 308 Gene3D G3DSA:3.40.50.170 11 216 3.4E-49 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS13515 a8a727232a3298171b703087e8281f0b 308 SUPERFAMILY SSF53328 12 211 1.15E-53 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS13515 a8a727232a3298171b703087e8281f0b 308 Pfam PF02911 Formyl transferase, C-terminal domain 211 302 1.5E-14 T 09-03-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS13515 a8a727232a3298171b703087e8281f0b 308 Pfam PF00551 Formyl transferase 32 184 8.9E-27 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS13515 a8a727232a3298171b703087e8281f0b 308 Gene3D G3DSA:3.10.25.10 217 300 1.3E-16 T 09-03-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 NA29_RS12400 2921dc496ebe4facd5379a115297af57 276 PIRSF PIRSF019254 1 264 1.2E-90 T 09-03-2017 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 NA29_RS12400 2921dc496ebe4facd5379a115297af57 276 Pfam PF04454 Encapsulating protein for peroxidase 1 251 9.1E-94 T 09-03-2017 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 NA29_RS09905 5aa6cd6e59846cc0463ce01aa6426502 67 Pfam PF04325 Protein of unknown function (DUF465) 14 57 2.1E-11 T 09-03-2017 IPR007420 Protein of unknown function DUF465 NA29_RS08720 43985da8bf6409d75b439bb5cb68cbe0 292 Pfam PF02754 Cysteine-rich domain 148 237 3.8E-11 T 09-03-2017 IPR004017 Cysteine-rich domain NA29_RS08720 43985da8bf6409d75b439bb5cb68cbe0 292 Pfam PF02754 Cysteine-rich domain 3 84 2.0E-11 T 09-03-2017 IPR004017 Cysteine-rich domain NA29_RS24000 9bd597092ca263a811ee7b81e70d10ae 681 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 46 681 4.7E-82 T 09-03-2017 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 NA29_RS24000 9bd597092ca263a811ee7b81e70d10ae 681 SUPERFAMILY SSF56935 15 680 3.48E-114 T 09-03-2017 NA29_RS24000 9bd597092ca263a811ee7b81e70d10ae 681 Pfam PF00593 TonB dependent receptor 434 675 2.7E-31 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS24000 9bd597092ca263a811ee7b81e70d10ae 681 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 156 3.3E-21 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS24000 9bd597092ca263a811ee7b81e70d10ae 681 Gene3D G3DSA:2.170.130.10 43 157 8.2E-31 T 09-03-2017 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 NA29_RS24000 9bd597092ca263a811ee7b81e70d10ae 681 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 664 681 - T 09-03-2017 IPR010917 TonB-dependent receptor, conserved site NA29_RS24000 9bd597092ca263a811ee7b81e70d10ae 681 Gene3D G3DSA:2.40.170.20 158 677 7.0E-105 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS06160 b2b8d19941e234f907a3f7d4392ff2f6 218 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 09-03-2017 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 NA29_RS06160 b2b8d19941e234f907a3f7d4392ff2f6 218 SUPERFAMILY SSF52218 1 139 6.95E-30 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS06160 b2b8d19941e234f907a3f7d4392ff2f6 218 Pfam PF03358 NADPH-dependent FMN reductase 11 129 9.5E-12 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 NA29_RS06160 b2b8d19941e234f907a3f7d4392ff2f6 218 Gene3D G3DSA:3.40.50.360 1 197 1.9E-34 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS10215 1afd3dfe6d0e769bcac74c03a4439dc2 289 SUPERFAMILY SSF53474 6 267 5.26E-55 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS10215 1afd3dfe6d0e769bcac74c03a4439dc2 289 Pfam PF07859 alpha/beta hydrolase fold 58 259 3.5E-58 T 09-03-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NA29_RS10215 1afd3dfe6d0e769bcac74c03a4439dc2 289 Gene3D G3DSA:3.40.50.1820 4 279 7.9E-71 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS02290 24f5f06494e628cd347d8af05facd5a8 110 Pfam PF11142 Protein of unknown function (DUF2917) 14 69 7.1E-20 T 09-03-2017 IPR021317 Protein of unknown function DUF2917 NA29_RS12470 05dcc449b98d0b3eb730b47bafb290cb 206 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 8 195 1.3E-75 T 09-03-2017 IPR018715 Protein of unknown function DUF2239 NA29_RS03250 2beb78f675c0883544c77298b418221e 446 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS03250 2beb78f675c0883544c77298b418221e 446 Pfam PF07690 Major Facilitator Superfamily 24 315 3.5E-34 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS03250 2beb78f675c0883544c77298b418221e 446 Gene3D G3DSA:1.20.1250.20 13 198 5.9E-31 T 09-03-2017 NA29_RS03250 2beb78f675c0883544c77298b418221e 446 SUPERFAMILY SSF103473 9 427 4.84E-78 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS03250 2beb78f675c0883544c77298b418221e 446 Gene3D G3DSA:1.20.1250.20 249 426 1.2E-24 T 09-03-2017 NA29_RS05315 1c53680d1b81132c5b82d904133a128e 173 SUPERFAMILY SSF55729 12 172 1.44E-36 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS05315 1c53680d1b81132c5b82d904133a128e 173 Gene3D G3DSA:3.40.630.30 11 172 9.2E-44 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS05315 1c53680d1b81132c5b82d904133a128e 173 Pfam PF13420 Acetyltransferase (GNAT) domain 13 164 1.8E-26 T 09-03-2017 NA29_RS16820 1b1d831c7bce503158cb79dbce813145 151 SUPERFAMILY SSF47729 54 150 1.3E-13 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NA29_RS16820 1b1d831c7bce503158cb79dbce813145 151 Pfam PF00216 Bacterial DNA-binding protein 54 150 6.7E-17 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS16820 1b1d831c7bce503158cb79dbce813145 151 SMART SM00411 54 151 6.6E-10 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 NA29_RS16820 1b1d831c7bce503158cb79dbce813145 151 Gene3D G3DSA:4.10.520.10 54 149 1.1E-13 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 NA29_RS02460 6132ad581e34eda6e049260819b33385 180 Pfam PF01661 Macro domain 27 137 2.2E-43 T 09-03-2017 IPR002589 Macro domain NA29_RS02460 6132ad581e34eda6e049260819b33385 180 SMART SM00506 10 139 4.0E-51 T 09-03-2017 IPR002589 Macro domain NA29_RS02460 6132ad581e34eda6e049260819b33385 180 Gene3D G3DSA:3.40.220.10 11 177 2.1E-66 T 09-03-2017 NA29_RS02460 6132ad581e34eda6e049260819b33385 180 SUPERFAMILY SSF52949 10 174 1.18E-61 T 09-03-2017 NA29_RS13020 766f7ae3b04d2d54ea37158eb6a16e8c 204 SUPERFAMILY SSF88697 3 197 1.39E-41 T 09-03-2017 IPR015947 PUA-like domain NA29_RS13020 766f7ae3b04d2d54ea37158eb6a16e8c 204 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 4 198 2.4E-16 T 09-03-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 NA29_RS13020 766f7ae3b04d2d54ea37158eb6a16e8c 204 SMART SM00464 3 199 2.2E-6 T 09-03-2017 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 NA29_RS15150 3e8b800bc6428169cf3c962c3ec64c8a 203 Pfam PF13649 Methyltransferase domain 37 108 3.9E-11 T 09-03-2017 NA29_RS15150 3e8b800bc6428169cf3c962c3ec64c8a 203 SUPERFAMILY SSF53335 17 182 1.41E-30 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS15150 3e8b800bc6428169cf3c962c3ec64c8a 203 Gene3D G3DSA:3.40.50.150 19 171 2.5E-25 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS16405 5e87dd0eb99b054555d1fe340479195c 425 Gene3D G3DSA:1.20.1250.20 13 189 3.6E-11 T 09-03-2017 NA29_RS16405 5e87dd0eb99b054555d1fe340479195c 425 SUPERFAMILY SSF103473 6 411 2.09E-33 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS16405 5e87dd0eb99b054555d1fe340479195c 425 Gene3D G3DSA:1.20.1250.20 233 408 8.3E-13 T 09-03-2017 NA29_RS16405 5e87dd0eb99b054555d1fe340479195c 425 Pfam PF07690 Major Facilitator Superfamily 22 290 2.8E-11 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS23555 a20ae5ee1771bda15841866c3b0a2a44 167 Pfam PF00583 Acetyltransferase (GNAT) family 80 140 1.0E-7 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS23555 a20ae5ee1771bda15841866c3b0a2a44 167 Gene3D G3DSA:3.40.630.30 2 142 5.6E-17 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS23555 a20ae5ee1771bda15841866c3b0a2a44 167 SUPERFAMILY SSF55729 1 164 3.6E-18 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS20980 7d6976ef86a889a8af5e6cb6d2aa5db7 238 PIRSF PIRSF005917 1 235 2.2E-50 T 09-03-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 NA29_RS20980 7d6976ef86a889a8af5e6cb6d2aa5db7 238 SUPERFAMILY SSF53790 3 235 1.96E-64 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 NA29_RS20980 7d6976ef86a889a8af5e6cb6d2aa5db7 238 Gene3D G3DSA:3.30.950.10 123 237 3.6E-29 T 09-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 NA29_RS22110 4fc3348f6d8b3729b08aa6f573c45c81 313 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 20 307 25.164 T 09-03-2017 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 NA29_RS22110 4fc3348f6d8b3729b08aa6f573c45c81 313 Pfam PF01564 Spermine/spermidine synthase 44 257 1.3E-36 T 09-03-2017 NA29_RS22110 4fc3348f6d8b3729b08aa6f573c45c81 313 SUPERFAMILY SSF53335 43 299 6.33E-55 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS22110 4fc3348f6d8b3729b08aa6f573c45c81 313 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 102 115 - T 09-03-2017 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 NA29_RS22110 4fc3348f6d8b3729b08aa6f573c45c81 313 Gene3D G3DSA:3.40.50.150 79 302 2.0E-52 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS06875 e22d18e82841e5a6e1c3c45803c43c6b 125 PIRSF PIRSF020555 1 124 8.7E-53 T 09-03-2017 IPR014508 Uncharacterised conserved protein withTPR-like repeats NA29_RS06875 e22d18e82841e5a6e1c3c45803c43c6b 125 Pfam PF16068 Domain of unknown function (DUF4810) 33 115 3.9E-32 T 09-03-2017 IPR014508 Uncharacterised conserved protein withTPR-like repeats NA29_RS22270 13d634abd866b3fbaa05310d18fc81a3 326 SUPERFAMILY SSF74650 28 323 4.08E-34 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NA29_RS22270 13d634abd866b3fbaa05310d18fc81a3 326 Gene3D G3DSA:2.70.98.10 33 198 1.6E-11 T 09-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 NA29_RS22270 13d634abd866b3fbaa05310d18fc81a3 326 Pfam PF01263 Aldose 1-epimerase 83 212 9.8E-17 T 09-03-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 NA29_RS23715 8d2039f754e8fb9d628edb4e575f145f 222 Pfam PF01926 50S ribosome-binding GTPase 26 148 2.6E-16 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 NA29_RS23715 8d2039f754e8fb9d628edb4e575f145f 222 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 212 25.581 T 09-03-2017 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 NA29_RS23715 8d2039f754e8fb9d628edb4e575f145f 222 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 208 1.9E-60 T 09-03-2017 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 NA29_RS23715 8d2039f754e8fb9d628edb4e575f145f 222 SUPERFAMILY SSF52540 15 213 8.88E-29 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23715 8d2039f754e8fb9d628edb4e575f145f 222 Gene3D G3DSA:3.40.50.300 14 212 2.9E-32 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS20165 597e68b657f746d2c34d0acf1073ff3b 200 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 199 2.4E-58 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 NA29_RS20165 597e68b657f746d2c34d0acf1073ff3b 200 SMART SM01207 8 189 2.1E-87 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 NA29_RS20165 597e68b657f746d2c34d0acf1073ff3b 200 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 197 21.143 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 NA29_RS20165 597e68b657f746d2c34d0acf1073ff3b 200 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 188 9.8E-51 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 NA29_RS05465 ed6f85c4573c16849d3c746c160f23bf 125 Pfam PF07978 NIPSNAP 3 102 8.1E-31 T 09-03-2017 IPR012577 NIPSNAP NA29_RS05465 ed6f85c4573c16849d3c746c160f23bf 125 SUPERFAMILY SSF54909 1 103 5.36E-33 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS05465 ed6f85c4573c16849d3c746c160f23bf 125 Gene3D G3DSA:3.30.70.900 1 103 1.8E-31 T 09-03-2017 NA29_RS21100 49908295936565821ada395e83174cfb 354 SUPERFAMILY SSF55103 127 352 7.52E-14 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 NA29_RS21100 49908295936565821ada395e83174cfb 354 Pfam PF01565 FAD binding domain 5 126 5.9E-18 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 NA29_RS21100 49908295936565821ada395e83174cfb 354 Gene3D G3DSA:3.30.465.10 43 164 9.7E-21 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 NA29_RS21100 49908295936565821ada395e83174cfb 354 SUPERFAMILY SSF56176 4 164 5.14E-30 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 NA29_RS01860 57efda81b56857faca53bd21a9fa2e97 349 Pfam PF13609 Gram-negative porin 18 331 2.6E-59 T 09-03-2017 NA29_RS01860 57efda81b56857faca53bd21a9fa2e97 349 Gene3D G3DSA:2.40.160.10 29 339 7.2E-82 T 09-03-2017 IPR023614 Porin domain NA29_RS01860 57efda81b56857faca53bd21a9fa2e97 349 SUPERFAMILY SSF56935 29 349 1.94E-73 T 09-03-2017 NA29_RS01180 a73e229e08084851b82085770ecbfda8 353 Pfam PF00355 Rieske [2Fe-2S] domain 6 82 7.2E-16 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS01180 a73e229e08084851b82085770ecbfda8 353 Gene3D G3DSA:2.102.10.10 5 117 1.6E-28 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS01180 a73e229e08084851b82085770ecbfda8 353 SUPERFAMILY SSF55961 97 344 1.33E-54 T 09-03-2017 NA29_RS01180 a73e229e08084851b82085770ecbfda8 353 SUPERFAMILY SSF50022 2 118 4.45E-30 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS05515 587ecb781187637f44cf4b2c1572eabc 292 SUPERFAMILY SSF103481 186 288 4.45E-12 T 09-03-2017 NA29_RS05515 587ecb781187637f44cf4b2c1572eabc 292 Pfam PF00892 EamA-like transporter family 153 285 1.8E-17 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS05515 587ecb781187637f44cf4b2c1572eabc 292 Pfam PF00892 EamA-like transporter family 16 142 1.1E-11 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS05515 587ecb781187637f44cf4b2c1572eabc 292 SUPERFAMILY SSF103481 54 145 1.57E-8 T 09-03-2017 NA29_RS20120 20b579072068bf2e9341cfa85870d6e0 288 Pfam PF13371 Tetratricopeptide repeat 206 277 7.1E-22 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS20120 20b579072068bf2e9341cfa85870d6e0 288 Pfam PF13369 Transglutaminase-like superfamily 40 204 1.1E-46 T 09-03-2017 IPR032698 Protein SirB1, N-terminal NA29_RS12595 ca7e87737f8a0f1731a79f5fec4154f1 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 276 1.5E-33 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS07105 589f3954f691130d1214ad92f1cfb99a 484 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 1.1E-8 T 09-03-2017 NA29_RS07105 589f3954f691130d1214ad92f1cfb99a 484 PRINTS PR01036 Tetracycline resistance protein TetB signature 203 221 1.1E-8 T 09-03-2017 NA29_RS07105 589f3954f691130d1214ad92f1cfb99a 484 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 1.1E-8 T 09-03-2017 NA29_RS07105 589f3954f691130d1214ad92f1cfb99a 484 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 1.1E-8 T 09-03-2017 NA29_RS07105 589f3954f691130d1214ad92f1cfb99a 484 PRINTS PR01036 Tetracycline resistance protein TetB signature 400 419 1.1E-8 T 09-03-2017 NA29_RS07105 589f3954f691130d1214ad92f1cfb99a 484 Pfam PF07690 Major Facilitator Superfamily 19 409 8.2E-49 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS07105 589f3954f691130d1214ad92f1cfb99a 484 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 413 3.0E-78 T 09-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 NA29_RS07105 589f3954f691130d1214ad92f1cfb99a 484 Gene3D G3DSA:1.20.1250.20 269 458 1.0E-11 T 09-03-2017 NA29_RS07105 589f3954f691130d1214ad92f1cfb99a 484 SUPERFAMILY SSF103473 12 203 5.1E-59 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS07105 589f3954f691130d1214ad92f1cfb99a 484 SUPERFAMILY SSF103473 249 454 5.1E-59 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS07105 589f3954f691130d1214ad92f1cfb99a 484 Gene3D G3DSA:1.20.1250.20 12 196 5.1E-33 T 09-03-2017 NA29_RS08295 638d8ce3458784c77e6fd88dbd31b656 462 Gene3D G3DSA:1.20.1250.20 13 195 5.5E-16 T 09-03-2017 NA29_RS08295 638d8ce3458784c77e6fd88dbd31b656 462 SUPERFAMILY SSF103473 8 197 1.83E-48 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS08295 638d8ce3458784c77e6fd88dbd31b656 462 SUPERFAMILY SSF103473 242 441 1.83E-48 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS08295 638d8ce3458784c77e6fd88dbd31b656 462 Pfam PF07690 Major Facilitator Superfamily 27 373 4.6E-28 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS08295 638d8ce3458784c77e6fd88dbd31b656 462 Gene3D G3DSA:1.20.1250.20 259 436 1.2E-17 T 09-03-2017 NA29_RS06475 789ed2862e9aecccc96c1d94c5cd91b1 551 SUPERFAMILY SSF52096 296 543 7.01E-17 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS06475 789ed2862e9aecccc96c1d94c5cd91b1 551 Pfam PF00378 Enoyl-CoA hydratase/isomerase 48 236 1.7E-23 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS06475 789ed2862e9aecccc96c1d94c5cd91b1 551 TIGRFAM TIGR03222 benzo_boxC: benzoyl-CoA-dihydrodiol lyase 7 551 1.6E-299 T 09-03-2017 IPR017633 Benzoyl-CoA-dihydrodiol lyase MetaCyc: PWY-1361 NA29_RS06475 789ed2862e9aecccc96c1d94c5cd91b1 551 Gene3D G3DSA:3.90.226.10 15 234 1.6E-37 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS06475 789ed2862e9aecccc96c1d94c5cd91b1 551 Gene3D G3DSA:3.90.226.10 281 481 8.6E-12 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS06475 789ed2862e9aecccc96c1d94c5cd91b1 551 SUPERFAMILY SSF52096 14 237 1.06E-32 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS12845 2ea331f8850c734a5bdadc78facbed2b 411 SUPERFAMILY SSF51905 12 158 1.01E-27 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS12845 2ea331f8850c734a5bdadc78facbed2b 411 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 13 137 8.5E-9 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS12845 2ea331f8850c734a5bdadc78facbed2b 411 Gene3D G3DSA:3.50.50.60 268 337 3.5E-51 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS12845 2ea331f8850c734a5bdadc78facbed2b 411 Gene3D G3DSA:3.50.50.60 12 125 3.5E-51 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS12845 2ea331f8850c734a5bdadc78facbed2b 411 SUPERFAMILY SSF51905 124 267 1.86E-19 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS00345 dc9dace87e12507c0b982a95f34e268e 369 SUPERFAMILY SSF51556 12 363 3.96E-62 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS00345 dc9dace87e12507c0b982a95f34e268e 369 Gene3D G3DSA:3.20.20.140 24 352 7.8E-71 T 09-03-2017 NA29_RS00345 dc9dace87e12507c0b982a95f34e268e 369 Pfam PF00962 Adenosine/AMP deaminase 28 348 8.3E-40 T 09-03-2017 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 NA29_RS11460 4a12a85cdc47bbafe0d7cffe20b7cc4c 402 PRINTS PR00184 Neisseria sp. porin signature 172 189 1.5E-8 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS11460 4a12a85cdc47bbafe0d7cffe20b7cc4c 402 PRINTS PR00184 Neisseria sp. porin signature 333 357 1.5E-8 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS11460 4a12a85cdc47bbafe0d7cffe20b7cc4c 402 PRINTS PR00184 Neisseria sp. porin signature 71 96 1.5E-8 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS11460 4a12a85cdc47bbafe0d7cffe20b7cc4c 402 Pfam PF13609 Gram-negative porin 20 361 5.3E-40 T 09-03-2017 NA29_RS11460 4a12a85cdc47bbafe0d7cffe20b7cc4c 402 SUPERFAMILY SSF56935 24 402 1.62E-81 T 09-03-2017 NA29_RS11460 4a12a85cdc47bbafe0d7cffe20b7cc4c 402 Gene3D G3DSA:2.40.160.10 24 402 5.4E-96 T 09-03-2017 IPR023614 Porin domain NA29_RS04395 6b944a564e2ce5e952f07f63365efe28 324 Pfam PF04280 Tim44-like domain 196 322 1.6E-16 T 09-03-2017 IPR007379 Tim44-like domain NA29_RS04395 6b944a564e2ce5e952f07f63365efe28 324 SUPERFAMILY SSF54427 180 322 4.38E-13 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS04395 6b944a564e2ce5e952f07f63365efe28 324 SMART SM00978 191 322 1.4E-46 T 09-03-2017 IPR007379 Tim44-like domain NA29_RS12315 6bd60ff49a966f018ed39073931fd09e 403 SUPERFAMILY SSF48256 32 399 2.49E-65 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS12315 6bd60ff49a966f018ed39073931fd09e 403 Pfam PF00285 Citrate synthase, C-terminal domain 70 389 1.7E-59 T 09-03-2017 IPR002020 Citrate synthase GO:0046912 NA29_RS12315 6bd60ff49a966f018ed39073931fd09e 403 Gene3D G3DSA:1.10.1660.10 2 51 6.8E-7 T 09-03-2017 NA29_RS12315 6bd60ff49a966f018ed39073931fd09e 403 Gene3D G3DSA:1.10.580.10 76 313 9.2E-38 T 09-03-2017 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 NA29_RS12315 6bd60ff49a966f018ed39073931fd09e 403 Pfam PF12728 Helix-turn-helix domain 3 54 2.3E-9 T 09-03-2017 NA29_RS22000 3b0307ac43d140415c378a7af70c7aca 246 SUPERFAMILY SSF53448 1 234 2.93E-50 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS22000 3b0307ac43d140415c378a7af70c7aca 246 Gene3D G3DSA:3.90.550.10 1 237 3.1E-47 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS22000 3b0307ac43d140415c378a7af70c7aca 246 Pfam PF00483 Nucleotidyl transferase 2 129 1.2E-20 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 NA29_RS09435 5a167060ae462340e60094762ac8fbb9 192 Pfam PF06736 Protein of unknown function (DUF1211) 5 89 4.2E-30 T 09-03-2017 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 NA29_RS12515 ef7c2e275bb42d8aab5d0d0a8892d91a 469 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 46 449 1.4E-136 T 09-03-2017 IPR018721 Protein of unknown function DUF2252 NA29_RS10100 82a3cc5fbdaf8817c5023f0f6d3c24e2 101 SUPERFAMILY SSF56349 4 81 2.82E-8 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NA29_RS10100 82a3cc5fbdaf8817c5023f0f6d3c24e2 101 Gene3D G3DSA:1.10.150.130 5 74 4.1E-8 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal NA29_RS08840 73a6a5d6a74a4ee2ef66c35949446b0f 346 SUPERFAMILY SSF144052 147 342 8.76E-14 T 09-03-2017 NA29_RS01660 e72a99f4bdde62f2ccbe930ccd6c3e25 84 Pfam PF07866 Protein of unknown function (DUF1653) 13 75 3.2E-16 T 09-03-2017 IPR023387 DUF1653-like domain NA29_RS01660 e72a99f4bdde62f2ccbe930ccd6c3e25 84 Gene3D G3DSA:2.30.30.320 8 80 1.5E-21 T 09-03-2017 IPR023387 DUF1653-like domain NA29_RS10510 ccc6ca4c7d3014176e6b2ba3ce617450 260 PIRSF PIRSF005902 1 260 9.8E-80 T 09-03-2017 IPR001130 TatD family GO:0016788 NA29_RS10510 ccc6ca4c7d3014176e6b2ba3ce617450 260 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 256 4.1E-84 T 09-03-2017 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 NA29_RS10510 ccc6ca4c7d3014176e6b2ba3ce617450 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 09-03-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 NA29_RS10510 ccc6ca4c7d3014176e6b2ba3ce617450 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 127 137 - T 09-03-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 NA29_RS10510 ccc6ca4c7d3014176e6b2ba3ce617450 260 Gene3D G3DSA:3.20.20.140 1 256 2.6E-88 T 09-03-2017 NA29_RS10510 ccc6ca4c7d3014176e6b2ba3ce617450 260 Pfam PF01026 TatD related DNase 3 255 1.6E-79 T 09-03-2017 IPR001130 TatD family GO:0016788 NA29_RS10510 ccc6ca4c7d3014176e6b2ba3ce617450 260 SUPERFAMILY SSF51556 1 257 7.43E-88 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS15230 9b5c63a78c9dd6a932b66b35f5b470fb 285 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 09-03-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 NA29_RS15230 9b5c63a78c9dd6a932b66b35f5b470fb 285 SUPERFAMILY SSF51556 2 254 6.82E-71 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS15230 9b5c63a78c9dd6a932b66b35f5b470fb 285 Gene3D G3DSA:3.20.20.140 1 254 4.8E-68 T 09-03-2017 NA29_RS15230 9b5c63a78c9dd6a932b66b35f5b470fb 285 Pfam PF01026 TatD related DNase 3 253 3.8E-57 T 09-03-2017 IPR001130 TatD family GO:0016788 NA29_RS15230 9b5c63a78c9dd6a932b66b35f5b470fb 285 PIRSF PIRSF005902 1 257 1.2E-57 T 09-03-2017 IPR001130 TatD family GO:0016788 NA29_RS08000 8151b0437bc508addb2fe1a2a74ad034 370 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 42 369 2.3E-104 T 09-03-2017 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 NA29_RS08000 8151b0437bc508addb2fe1a2a74ad034 370 Gene3D G3DSA:3.75.10.10 38 370 1.2E-119 T 09-03-2017 NA29_RS08000 8151b0437bc508addb2fe1a2a74ad034 370 SUPERFAMILY SSF55909 38 370 4.28E-113 T 09-03-2017 NA29_RS19150 3793e0de2c00e00863133842771ea0bd 191 Gene3D G3DSA:3.40.50.2300 1 125 1.4E-14 T 09-03-2017 NA29_RS19150 3793e0de2c00e00863133842771ea0bd 191 SUPERFAMILY SSF52172 1 184 9.25E-45 T 09-03-2017 IPR011006 CheY-like superfamily NA29_RS19150 3793e0de2c00e00863133842771ea0bd 191 Pfam PF03861 ANTAR domain 132 184 3.7E-18 T 09-03-2017 IPR005561 ANTAR domain GO:0003723 NA29_RS19150 3793e0de2c00e00863133842771ea0bd 191 SMART SM01012 129 184 1.0E-20 T 09-03-2017 IPR005561 ANTAR domain GO:0003723 NA29_RS19150 3793e0de2c00e00863133842771ea0bd 191 Gene3D G3DSA:1.10.10.10 132 190 4.0E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19150 3793e0de2c00e00863133842771ea0bd 191 Pfam PF00072 Response regulator receiver domain 4 99 2.2E-8 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 NA29_RS19150 3793e0de2c00e00863133842771ea0bd 191 PIRSF PIRSF036382 1 191 1.8E-58 T 09-03-2017 IPR008327 Signal transduction response regulator, antiterminator NA29_RS08735 6fa5248f93949fc0b4ee2e400fb0902a 423 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 60 418 5.4E-158 T 09-03-2017 IPR017777 ABC transporter, urea, substrate-binding, UrtA NA29_RS08735 6fa5248f93949fc0b4ee2e400fb0902a 423 SUPERFAMILY SSF53822 59 419 2.52E-94 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS08735 6fa5248f93949fc0b4ee2e400fb0902a 423 Gene3D G3DSA:3.40.50.2300 177 360 1.6E-66 T 09-03-2017 NA29_RS08735 6fa5248f93949fc0b4ee2e400fb0902a 423 Pfam PF13433 Periplasmic binding protein domain 61 420 4.7E-132 T 09-03-2017 NA29_RS02095 4cdc859ff0e52685181cb69ab29451aa 226 Gene3D G3DSA:3.30.70.1070 145 225 2.5E-26 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 NA29_RS02095 4cdc859ff0e52685181cb69ab29451aa 226 SUPERFAMILY SSF110997 147 224 1.31E-20 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 NA29_RS02095 4cdc859ff0e52685181cb69ab29451aa 226 Pfam PF05036 Sporulation related domain 147 222 8.4E-19 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 NA29_RS25275 22a43f58dd2844d9f2c9f7472a89d8a9 323 Gene3D G3DSA:3.30.1780.10 1 142 6.9E-40 T 09-03-2017 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 NA29_RS25275 22a43f58dd2844d9f2c9f7472a89d8a9 323 Gene3D G3DSA:3.40.50.720 143 299 4.8E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS25275 22a43f58dd2844d9f2c9f7472a89d8a9 323 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 6 314 3.6E-35 T 09-03-2017 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 NA29_RS25275 22a43f58dd2844d9f2c9f7472a89d8a9 323 PIRSF PIRSF001439 1 320 2.1E-58 T 09-03-2017 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 NA29_RS25275 22a43f58dd2844d9f2c9f7472a89d8a9 323 SUPERFAMILY SSF51735 1 319 4.94E-69 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS24085 38e9b5954cfc0cd066f9e78605ece3f3 41 SUPERFAMILY SSF55729 7 40 9.45E-5 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS24085 38e9b5954cfc0cd066f9e78605ece3f3 41 Pfam PF00583 Acetyltransferase (GNAT) family 13 40 2.3E-4 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS24085 38e9b5954cfc0cd066f9e78605ece3f3 41 Gene3D G3DSA:3.40.630.30 4 39 4.6E-5 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS02260 6bde197a357c13f27a2bfb63ffcdb76d 110 SUPERFAMILY SSF52833 9 109 8.16E-28 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS02260 6bde197a357c13f27a2bfb63ffcdb76d 110 Gene3D G3DSA:3.40.30.10 9 109 1.5E-34 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS05665 e77974abe32b2ca94fdf29c1c9c6c048 262 Pfam PF00174 Oxidoreductase molybdopterin binding domain 105 251 8.8E-29 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 NA29_RS05665 e77974abe32b2ca94fdf29c1c9c6c048 262 SUPERFAMILY SSF56524 58 261 1.83E-57 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 NA29_RS05665 e77974abe32b2ca94fdf29c1c9c6c048 262 Gene3D G3DSA:3.90.420.10 98 260 5.0E-49 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 NA29_RS05730 2ae3e72936f8428827dbfe6687301e03 165 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 23 8.5E-6 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site NA29_RS05730 2ae3e72936f8428827dbfe6687301e03 165 Pfam PF13633 Prokaryotic N-terminal methylation site 3 26 8.6E-7 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site NA29_RS05730 2ae3e72936f8428827dbfe6687301e03 165 SUPERFAMILY SSF54523 5 89 1.57E-8 T 09-03-2017 NA29_RS05730 2ae3e72936f8428827dbfe6687301e03 165 Pfam PF12019 Type II transport protein GspH 40 155 5.2E-15 T 09-03-2017 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 NA29_RS04630 3631898a08d79439548db39a489d86ab 451 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 10 451 3.6E-153 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 NA29_RS04630 3631898a08d79439548db39a489d86ab 451 Pfam PF02447 GntP family permease 9 450 2.8E-164 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 NA29_RS04630 3631898a08d79439548db39a489d86ab 451 PIRSF PIRSF002746 4 451 8.0E-159 T 09-03-2017 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 NA29_RS02925 19658b1118b66ea328a9c68addbd78de 35 Pfam PF12951 Passenger-associated-transport-repeat 7 32 6.0E-9 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02925 19658b1118b66ea328a9c68addbd78de 35 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 6 33 2.5E-9 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS24595 fd2ea3fe04a082ba8689293fdc837007 312 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 80 96 - T 09-03-2017 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 Reactome: R-HSA-163560 NA29_RS24595 fd2ea3fe04a082ba8689293fdc837007 312 Pfam PF07859 alpha/beta hydrolase fold 80 287 2.8E-63 T 09-03-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NA29_RS24595 fd2ea3fe04a082ba8689293fdc837007 312 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 152 164 - T 09-03-2017 IPR033140 Lipase, GDXG, putative serine active site NA29_RS24595 fd2ea3fe04a082ba8689293fdc837007 312 SUPERFAMILY SSF53474 25 311 9.65E-64 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS24595 fd2ea3fe04a082ba8689293fdc837007 312 Gene3D G3DSA:3.40.50.1820 7 311 4.2E-80 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS22890 1ba91ab822194b958db72b1350f2ac98 99 Gene3D G3DSA:3.30.70.100 13 97 3.7E-21 T 09-03-2017 NA29_RS22890 1ba91ab822194b958db72b1350f2ac98 99 SUPERFAMILY SSF54975 13 97 3.05E-20 T 09-03-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NA29_RS22890 1ba91ab822194b958db72b1350f2ac98 99 Pfam PF00708 Acylphosphatase 13 97 1.4E-19 T 09-03-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NA29_RS06375 242036759ef14c60c00a060f730fecfc 209 Pfam PF01810 LysE type translocator 16 208 3.6E-37 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS06375 242036759ef14c60c00a060f730fecfc 209 PIRSF PIRSF006324 1 209 1.3E-53 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS19215 1cc7486e3351bdcfb7ec3ebc2e16aa7f 157 Gene3D G3DSA:1.10.10.10 14 144 8.2E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19215 1cc7486e3351bdcfb7ec3ebc2e16aa7f 157 SMART SM00347 28 129 5.0E-14 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS19215 1cc7486e3351bdcfb7ec3ebc2e16aa7f 157 SUPERFAMILY SSF46785 9 144 1.22E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS19215 1cc7486e3351bdcfb7ec3ebc2e16aa7f 157 Pfam PF13463 Winged helix DNA-binding domain 43 102 9.8E-9 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS19215 1cc7486e3351bdcfb7ec3ebc2e16aa7f 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 3.3E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS19215 1cc7486e3351bdcfb7ec3ebc2e16aa7f 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 3.3E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS19215 1cc7486e3351bdcfb7ec3ebc2e16aa7f 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 3.3E-10 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS12810 ce534c965655fce80255270fd74fb92e 331 Gene3D G3DSA:1.25.40.10 189 293 3.4E-5 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS04595 50af595aa8fd0e2a95cf28fd40f916d2 180 Gene3D G3DSA:3.30.420.10 1 154 4.6E-64 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS04595 50af595aa8fd0e2a95cf28fd40f916d2 180 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 146 - T 09-03-2017 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 NA29_RS04595 50af595aa8fd0e2a95cf28fd40f916d2 180 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 152 46.598 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NA29_RS04595 50af595aa8fd0e2a95cf28fd40f916d2 180 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 152 1.3E-54 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NA29_RS04595 50af595aa8fd0e2a95cf28fd40f916d2 180 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 149 1.7E-53 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NA29_RS04595 50af595aa8fd0e2a95cf28fd40f916d2 180 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 2.4E-32 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NA29_RS04595 50af595aa8fd0e2a95cf28fd40f916d2 180 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 2.4E-32 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NA29_RS04595 50af595aa8fd0e2a95cf28fd40f916d2 180 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 2.4E-32 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NA29_RS04595 50af595aa8fd0e2a95cf28fd40f916d2 180 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 137 149 2.4E-32 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NA29_RS04595 50af595aa8fd0e2a95cf28fd40f916d2 180 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 2.4E-32 T 09-03-2017 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 NA29_RS04595 50af595aa8fd0e2a95cf28fd40f916d2 180 SUPERFAMILY SSF53098 1 154 2.78E-53 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS19405 b24d163ff0763f9c570fa547d182998f 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 253 2.2E-40 T 09-03-2017 NA29_RS19405 b24d163ff0763f9c570fa547d182998f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.3E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS19405 b24d163ff0763f9c570fa547d182998f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS19405 b24d163ff0763f9c570fa547d182998f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.3E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS19405 b24d163ff0763f9c570fa547d182998f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.3E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS19405 b24d163ff0763f9c570fa547d182998f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.3E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR NA29_RS19405 b24d163ff0763f9c570fa547d182998f 259 Gene3D G3DSA:3.40.50.720 4 254 6.4E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS19405 b24d163ff0763f9c570fa547d182998f 259 SUPERFAMILY SSF51735 6 254 1.81E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22710 6f6f1009378b2088d3341b859e6dbd1a 301 Gene3D G3DSA:2.60.120.10 46 264 1.3E-18 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS22710 6f6f1009378b2088d3341b859e6dbd1a 301 SUPERFAMILY SSF51182 47 293 4.0E-19 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS22710 6f6f1009378b2088d3341b859e6dbd1a 301 Pfam PF05726 Pirin C-terminal cupin domain 192 290 9.1E-8 T 09-03-2017 IPR008778 Pirin, C-terminal domain NA29_RS22710 6f6f1009378b2088d3341b859e6dbd1a 301 PIRSF PIRSF006232 31 296 2.2E-23 T 09-03-2017 IPR012093 Pirin NA29_RS22710 6f6f1009378b2088d3341b859e6dbd1a 301 Pfam PF02678 Pirin 46 133 1.8E-6 T 09-03-2017 IPR003829 Pirin, N-terminal domain NA29_RS03640 9aa2b702bbdeb7923736d26c85ea8e2c 333 Pfam PF00296 Luciferase-like monooxygenase 25 301 3.2E-38 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS03640 9aa2b702bbdeb7923736d26c85ea8e2c 333 SUPERFAMILY SSF51679 9 329 1.01E-87 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS03640 9aa2b702bbdeb7923736d26c85ea8e2c 333 Gene3D G3DSA:3.20.20.30 9 328 1.5E-91 T 09-03-2017 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 NA29_RS03640 9aa2b702bbdeb7923736d26c85ea8e2c 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 329 3.0E-133 T 09-03-2017 IPR019949 Luciferase family oxidoreductase, group 1 NA29_RS03920 b315aeb8f1a4fda30baf29549b2cfc63 66 Pfam PF11755 Protein of unknown function (DUF3311) 6 60 3.8E-20 T 09-03-2017 IPR021741 Protein of unknown function DUF3311 NA29_RS05175 530938d2dda2c06d09eae4078274edd7 351 Pfam PF16344 Domain of unknown function (DUF4974) 252 338 1.2E-7 T 09-03-2017 IPR032508 Protein FecR, C-terminal NA29_RS05175 530938d2dda2c06d09eae4078274edd7 351 Pfam PF16220 Domain of unknown function (DUF4880) 20 61 3.8E-7 T 09-03-2017 IPR032623 FecR, N-terminal NA29_RS05175 530938d2dda2c06d09eae4078274edd7 351 Pfam PF04773 FecR protein 146 239 1.3E-9 T 09-03-2017 IPR006860 FecR protein NA29_RS05175 530938d2dda2c06d09eae4078274edd7 351 PIRSF PIRSF018266 10 350 2.7E-56 T 09-03-2017 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NA29_RS04690 7484f395672a7a0f69452feebc93ea21 72 TIGRFAM TIGR02105 III_needle: type III secretion apparatus needle protein 1 71 4.9E-13 T 09-03-2017 IPR011841 Type III secretion system, needle protein GO:0008565|GO:0009405|GO:0015031 NA29_RS04690 7484f395672a7a0f69452feebc93ea21 72 SUPERFAMILY SSF140129 1 67 2.09E-13 T 09-03-2017 NA29_RS04690 7484f395672a7a0f69452feebc93ea21 72 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 4 71 2.1E-20 T 09-03-2017 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 NA29_RS21445 2960dbf5f2428dcfe49d32e1d5dd0d9c 400 SUPERFAMILY SSF52922 220 399 1.23E-26 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NA29_RS21445 2960dbf5f2428dcfe49d32e1d5dd0d9c 400 Gene3D G3DSA:3.40.50.920 225 399 4.8E-34 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 NA29_RS03855 5a48da9e16b758bfd561ca7179029474 442 Gene3D G3DSA:1.20.1250.20 241 430 1.6E-19 T 09-03-2017 NA29_RS03855 5a48da9e16b758bfd561ca7179029474 442 Gene3D G3DSA:1.20.1250.20 13 221 2.3E-22 T 09-03-2017 NA29_RS03855 5a48da9e16b758bfd561ca7179029474 442 SUPERFAMILY SSF103473 10 431 8.76E-64 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS03855 5a48da9e16b758bfd561ca7179029474 442 Pfam PF07690 Major Facilitator Superfamily 21 383 9.3E-27 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS04925 deb44fd09592fe3acea3a72a60eb5d0c 217 SUPERFAMILY SSF74653 136 213 1.12E-20 T 09-03-2017 NA29_RS04925 deb44fd09592fe3acea3a72a60eb5d0c 217 Gene3D G3DSA:3.30.1150.10 103 217 5.7E-18 T 09-03-2017 NA29_RS04925 deb44fd09592fe3acea3a72a60eb5d0c 217 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 140 216 1.6E-18 T 09-03-2017 IPR006260 TonB, C-terminal GO:0006810 NA29_RS04925 deb44fd09592fe3acea3a72a60eb5d0c 217 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 138 215 5.4E-21 T 09-03-2017 IPR006260 TonB, C-terminal GO:0006810 NA29_RS17455 a74fe561385efb6174cb020c1849db69 206 Pfam PF03458 UPF0126 domain 11 81 1.8E-18 T 09-03-2017 IPR005115 Uncharacterised domain UPF0126 NA29_RS17455 a74fe561385efb6174cb020c1849db69 206 Pfam PF03458 UPF0126 domain 99 172 1.3E-22 T 09-03-2017 IPR005115 Uncharacterised domain UPF0126 NA29_RS01695 e05cc8083746be52104d14f6bc975759 325 SUPERFAMILY SSF50475 176 277 2.69E-10 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS01695 e05cc8083746be52104d14f6bc975759 325 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 44 135 1.3E-4 T 09-03-2017 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 NA29_RS01695 e05cc8083746be52104d14f6bc975759 325 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 180 276 3.1E-10 T 09-03-2017 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 NA29_RS01695 e05cc8083746be52104d14f6bc975759 325 Gene3D G3DSA:2.30.110.10 176 280 7.9E-12 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS21630 429ce8a2e00495391ae0a7e571726cba 363 Pfam PF00953 Glycosyl transferase family 4 77 232 1.6E-30 T 09-03-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 NA29_RS21050 7e05c6b61294842502f2425b4986fb97 472 Pfam PF16980 Putative citrate transport 30 472 1.4E-199 T 09-03-2017 IPR031566 Putative citrate transporter NA29_RS07015 b6cd08c703f45734b644c9669e21d0f7 380 Pfam PF07690 Major Facilitator Superfamily 211 374 4.4E-13 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS07015 b6cd08c703f45734b644c9669e21d0f7 380 SUPERFAMILY SSF103473 3 378 1.28E-38 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS07015 b6cd08c703f45734b644c9669e21d0f7 380 Gene3D G3DSA:1.20.1250.20 3 181 3.0E-13 T 09-03-2017 NA29_RS07015 b6cd08c703f45734b644c9669e21d0f7 380 Gene3D G3DSA:1.20.1250.20 204 376 6.3E-20 T 09-03-2017 NA29_RS20405 1b60dac8fbbec5b141726079a54994b2 285 Gene3D G3DSA:3.60.110.10 11 281 1.4E-86 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NA29_RS20405 1b60dac8fbbec5b141726079a54994b2 285 SUPERFAMILY SSF56317 18 281 8.24E-83 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NA29_RS20405 1b60dac8fbbec5b141726079a54994b2 285 Pfam PF00795 Carbon-nitrogen hydrolase 20 272 1.7E-55 T 09-03-2017 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 NA29_RS23440 eb0bc7f9137118036e807e89f35f9f2b 124 SUPERFAMILY SSF54197 3 119 2.32E-35 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 NA29_RS23440 eb0bc7f9137118036e807e89f35f9f2b 124 Gene3D G3DSA:3.30.428.10 2 119 9.1E-36 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 NA29_RS23440 eb0bc7f9137118036e807e89f35f9f2b 124 ProSitePatterns PS00892 HIT domain signature. 98 116 - T 09-03-2017 IPR019808 Histidine triad, conserved site NA29_RS23440 eb0bc7f9137118036e807e89f35f9f2b 124 PRINTS PR00332 Histidine triad family signature 7 23 3.6E-16 T 09-03-2017 IPR001310 Histidine triad (HIT) protein NA29_RS23440 eb0bc7f9137118036e807e89f35f9f2b 124 PRINTS PR00332 Histidine triad family signature 28 46 3.6E-16 T 09-03-2017 IPR001310 Histidine triad (HIT) protein NA29_RS23440 eb0bc7f9137118036e807e89f35f9f2b 124 PRINTS PR00332 Histidine triad family signature 105 115 3.6E-16 T 09-03-2017 IPR001310 Histidine triad (HIT) protein NA29_RS23440 eb0bc7f9137118036e807e89f35f9f2b 124 Pfam PF11969 Scavenger mRNA decapping enzyme C-term binding 5 116 2.4E-25 T 09-03-2017 NA29_RS07120 83558c87db5044f8bb827d0512e9f6f1 432 SUPERFAMILY SSF103473 13 428 3.4E-61 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS07120 83558c87db5044f8bb827d0512e9f6f1 432 Gene3D G3DSA:1.20.1250.20 246 425 1.3E-19 T 09-03-2017 NA29_RS07120 83558c87db5044f8bb827d0512e9f6f1 432 Gene3D G3DSA:1.20.1250.20 15 212 3.5E-21 T 09-03-2017 NA29_RS07120 83558c87db5044f8bb827d0512e9f6f1 432 Pfam PF00083 Sugar (and other) transporter 16 416 7.3E-25 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS02465 78cd77f75a325a3354619f1ac5b843d2 156 Gene3D G3DSA:3.40.1280.10 1 155 1.7E-65 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal NA29_RS02465 78cd77f75a325a3354619f1ac5b843d2 156 Pfam PF00588 SpoU rRNA Methylase family 2 143 3.5E-31 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 NA29_RS02465 78cd77f75a325a3354619f1ac5b843d2 156 SUPERFAMILY SSF75217 1 153 1.11E-42 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases NA29_RS02465 78cd77f75a325a3354619f1ac5b843d2 156 PIRSF PIRSF029256 1 156 2.6E-64 T 09-03-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 NA29_RS02465 78cd77f75a325a3354619f1ac5b843d2 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 153 33.045 T 09-03-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 NA29_RS02465 78cd77f75a325a3354619f1ac5b843d2 156 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 154 6.2E-61 T 09-03-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 NA29_RS20205 00d8239e882f064062d143eaf5175375 322 Pfam PF00589 Phage integrase family 138 307 6.2E-48 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS20205 00d8239e882f064062d143eaf5175375 322 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 322 58.437 T 09-03-2017 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 NA29_RS20205 00d8239e882f064062d143eaf5175375 322 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 10 321 3.2E-106 T 09-03-2017 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 NA29_RS20205 00d8239e882f064062d143eaf5175375 322 SUPERFAMILY SSF56349 132 320 1.21E-54 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NA29_RS20205 00d8239e882f064062d143eaf5175375 322 SUPERFAMILY SSF47823 71 125 7.06E-12 T 09-03-2017 IPR010998 Integrase, Lambda-type, N-terminal NA29_RS20205 00d8239e882f064062d143eaf5175375 322 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 46 5.4E-9 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 NA29_RS20205 00d8239e882f064062d143eaf5175375 322 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 73 115 5.3E-6 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 NA29_RS20205 00d8239e882f064062d143eaf5175375 322 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 322 55.837 T 09-03-2017 IPR023009 Tyrosine recombinase XerC/XerD NA29_RS20205 00d8239e882f064062d143eaf5175375 322 Gene3D G3DSA:1.10.443.10 138 312 1.3E-54 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS20205 00d8239e882f064062d143eaf5175375 322 Gene3D G3DSA:1.10.150.130 7 124 9.8E-25 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal NA29_RS20205 00d8239e882f064062d143eaf5175375 322 SUPERFAMILY SSF47823 6 55 9.81E-15 T 09-03-2017 IPR010998 Integrase, Lambda-type, N-terminal NA29_RS17305 623da70202d2b6e301bd790631915e8a 248 Pfam PF01966 HD domain 81 142 1.5E-4 T 09-03-2017 IPR006674 HD domain NA29_RS17305 623da70202d2b6e301bd790631915e8a 248 SUPERFAMILY SSF109604 81 184 7.22E-8 T 09-03-2017 NA29_RS17305 623da70202d2b6e301bd790631915e8a 248 Gene3D G3DSA:1.10.3210.10 83 142 6.3E-4 T 09-03-2017 IPR006674 HD domain NA29_RS20020 f78c14a83619a278ac6bd539cd7027d0 119 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 18 113 1.3E-7 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NA29_RS20020 f78c14a83619a278ac6bd539cd7027d0 119 Gene3D G3DSA:3.10.180.10 18 118 1.5E-31 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS20020 f78c14a83619a278ac6bd539cd7027d0 119 SUPERFAMILY SSF54593 18 115 3.62E-24 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS03245 91dab239a5732da467ac20647c25acab 234 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 4 169 5.6E-17 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS03245 91dab239a5732da467ac20647c25acab 234 SUPERFAMILY SSF53639 3 191 7.65E-25 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS03245 91dab239a5732da467ac20647c25acab 234 Gene3D G3DSA:3.40.225.10 4 196 3.4E-26 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS03245 91dab239a5732da467ac20647c25acab 234 SMART SM01007 1 171 1.4E-9 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS10420 ea9ac0c3127def98cffcc2a06fbd8519 139 SUPERFAMILY SSF101756 53 137 1.96E-22 T 09-03-2017 IPR005220 Bacterial OB-fold NA29_RS10420 ea9ac0c3127def98cffcc2a06fbd8519 139 Gene3D G3DSA:2.40.50.200 38 139 5.4E-28 T 09-03-2017 IPR005220 Bacterial OB-fold NA29_RS10420 ea9ac0c3127def98cffcc2a06fbd8519 139 Pfam PF04076 Bacterial OB fold (BOF) protein 51 136 9.6E-21 T 09-03-2017 IPR005220 Bacterial OB-fold NA29_RS14855 61015906a83e3c71f9a19b1003160316 247 SUPERFAMILY SSF46785 14 92 3.93E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14855 61015906a83e3c71f9a19b1003160316 247 Gene3D G3DSA:1.10.10.10 14 85 2.1E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS14855 61015906a83e3c71f9a19b1003160316 247 SMART SM00345 20 79 2.3E-18 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS14855 61015906a83e3c71f9a19b1003160316 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 79 2.2E-20 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS14855 61015906a83e3c71f9a19b1003160316 247 SMART SM00866 99 241 2.2E-34 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 NA29_RS14855 61015906a83e3c71f9a19b1003160316 247 Pfam PF07702 UTRA domain 102 239 5.0E-33 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 NA29_RS14855 61015906a83e3c71f9a19b1003160316 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 1.7E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS14855 61015906a83e3c71f9a19b1003160316 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 1.7E-5 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 NA29_RS14855 61015906a83e3c71f9a19b1003160316 247 SUPERFAMILY SSF64288 68 246 5.5E-40 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain NA29_RS14855 61015906a83e3c71f9a19b1003160316 247 Gene3D G3DSA:3.40.1410.10 102 246 1.0E-43 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain NA29_RS24500 dbcdf46f3f106ee76363ae83252afc72 115 SUPERFAMILY SSF46785 6 87 3.67E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS24500 dbcdf46f3f106ee76363ae83252afc72 115 Pfam PF01022 Bacterial regulatory protein, arsR family 21 65 7.1E-13 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS24500 dbcdf46f3f106ee76363ae83252afc72 115 Gene3D G3DSA:1.10.10.10 6 89 1.2E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS24500 dbcdf46f3f106ee76363ae83252afc72 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 2.7E-13 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS24500 dbcdf46f3f106ee76363ae83252afc72 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 2.7E-13 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS24500 dbcdf46f3f106ee76363ae83252afc72 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 2.7E-13 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS24500 dbcdf46f3f106ee76363ae83252afc72 115 SMART SM00418 13 92 3.5E-21 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 NA29_RS00430 c6cf0a6520aadeb344bfea4ebefee3ad 397 Gene3D G3DSA:1.20.1250.20 6 185 2.9E-29 T 09-03-2017 NA29_RS00430 c6cf0a6520aadeb344bfea4ebefee3ad 397 Pfam PF07690 Major Facilitator Superfamily 10 318 6.5E-40 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS00430 c6cf0a6520aadeb344bfea4ebefee3ad 397 Gene3D G3DSA:1.20.1250.20 199 383 2.5E-18 T 09-03-2017 NA29_RS00430 c6cf0a6520aadeb344bfea4ebefee3ad 397 SUPERFAMILY SSF103473 3 381 1.16E-65 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS08335 fc14de681fa8ba0ca412b94823f6231f 277 SUPERFAMILY SSF46689 63 112 7.17E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08335 fc14de681fa8ba0ca412b94823f6231f 277 Pfam PF12833 Helix-turn-helix domain 33 111 1.4E-16 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS08335 fc14de681fa8ba0ca412b94823f6231f 277 SUPERFAMILY SSF46689 11 58 1.88E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08335 fc14de681fa8ba0ca412b94823f6231f 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 64 106 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 NA29_RS08335 fc14de681fa8ba0ca412b94823f6231f 277 SUPERFAMILY SSF55136 127 277 2.41E-37 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain NA29_RS08335 fc14de681fa8ba0ca412b94823f6231f 277 Pfam PF06445 GyrI-like small molecule binding domain 127 277 1.1E-33 T 09-03-2017 IPR029442 GyrI-like small molecule binding domain NA29_RS08335 fc14de681fa8ba0ca412b94823f6231f 277 Gene3D G3DSA:3.20.80.10 127 277 5.7E-46 T 09-03-2017 IPR011256 Regulatory factor, effector binding domain NA29_RS08335 fc14de681fa8ba0ca412b94823f6231f 277 Gene3D G3DSA:1.10.10.60 65 112 3.6E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08335 fc14de681fa8ba0ca412b94823f6231f 277 Gene3D G3DSA:1.10.10.60 9 64 1.1E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS08335 fc14de681fa8ba0ca412b94823f6231f 277 SMART SM00342 27 110 7.6E-19 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS08335 fc14de681fa8ba0ca412b94823f6231f 277 SMART SM00871 125 277 1.1E-39 T 09-03-2017 IPR010499 Bacterial transcription activator, effector binding NA29_RS21660 3715bcd9204239ac2d75193ee26f2f48 189 Gene3D G3DSA:3.30.70.1300 46 132 7.0E-31 T 09-03-2017 NA29_RS21660 3715bcd9204239ac2d75193ee26f2f48 189 SUPERFAMILY SSF143456 7 186 2.88E-63 T 09-03-2017 NA29_RS21660 3715bcd9204239ac2d75193ee26f2f48 189 Pfam PF02622 Uncharacterized ACR, COG1678 17 176 1.5E-49 T 09-03-2017 IPR003774 Protein of unknown function UPF0301 NA29_RS21660 3715bcd9204239ac2d75193ee26f2f48 189 Gene3D G3DSA:3.40.1740.10 133 178 1.4E-33 T 09-03-2017 NA29_RS21660 3715bcd9204239ac2d75193ee26f2f48 189 Gene3D G3DSA:3.40.1740.10 5 45 1.4E-33 T 09-03-2017 NA29_RS21660 3715bcd9204239ac2d75193ee26f2f48 189 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 6 189 38.367 T 09-03-2017 IPR003774 Protein of unknown function UPF0301 NA29_RS13550 b9e8dc3fd7cdab373a50f3b9ecb7790a 336 Pfam PF01384 Phosphate transporter family 25 166 1.4E-36 T 09-03-2017 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 NA29_RS13550 b9e8dc3fd7cdab373a50f3b9ecb7790a 336 Pfam PF01384 Phosphate transporter family 171 325 1.0E-55 T 09-03-2017 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 NA29_RS15705 ec631e4b76af7efaf1ecb6ffa2f726a5 222 Pfam PF00293 NUDIX domain 56 140 3.1E-14 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 NA29_RS15705 ec631e4b76af7efaf1ecb6ffa2f726a5 222 SUPERFAMILY SSF55811 39 217 2.71E-36 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS15705 ec631e4b76af7efaf1ecb6ffa2f726a5 222 Gene3D G3DSA:3.90.79.10 53 220 1.1E-41 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 NA29_RS17535 6442dbf4b7a94d936ec181f81c329459 438 SUPERFAMILY SSF103473 17 434 1.06E-85 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS17535 6442dbf4b7a94d936ec181f81c329459 438 Gene3D G3DSA:1.20.1250.20 243 430 3.9E-23 T 09-03-2017 NA29_RS17535 6442dbf4b7a94d936ec181f81c329459 438 Gene3D G3DSA:1.20.1250.20 25 227 1.4E-43 T 09-03-2017 NA29_RS17535 6442dbf4b7a94d936ec181f81c329459 438 Pfam PF07690 Major Facilitator Superfamily 35 397 1.5E-47 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS20770 6bd4423d56acb51cc87115db15ca98d4 292 Gene3D G3DSA:3.40.50.1820 45 272 4.1E-28 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS20770 6bd4423d56acb51cc87115db15ca98d4 292 SUPERFAMILY SSF53474 42 270 1.4E-28 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS20770 6bd4423d56acb51cc87115db15ca98d4 292 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 44 185 5.2E-6 T 09-03-2017 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 NA29_RS06025 f9a2f130391f31bde8d5217510e0d431 205 Gene3D G3DSA:1.20.5.440 9 47 6.0E-16 T 09-03-2017 NA29_RS06025 f9a2f130391f31bde8d5217510e0d431 205 SUPERFAMILY SSF51182 11 195 1.78E-55 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS06025 f9a2f130391f31bde8d5217510e0d431 205 Gene3D G3DSA:2.60.120.10 48 184 7.1E-41 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS06025 f9a2f130391f31bde8d5217510e0d431 205 Pfam PF05995 Cysteine dioxygenase type I 45 163 2.8E-8 T 09-03-2017 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 NA29_RS15660 aab923335f998a7719f6a66a59b760fc 293 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 277 9.3E-46 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS02190 dcbaf9f053d6a563244b9fb84137ebbe 145 Pfam PF12680 SnoaL-like domain 13 113 2.4E-9 T 09-03-2017 IPR009959 Polyketide cyclase SnoaL-like domain NA29_RS02190 dcbaf9f053d6a563244b9fb84137ebbe 145 Gene3D G3DSA:3.10.450.50 4 122 5.2E-12 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS02190 dcbaf9f053d6a563244b9fb84137ebbe 145 SUPERFAMILY SSF54427 8 138 1.24E-16 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS02655 19d94ce8ded0842b4b302d18b6106289 197 SUPERFAMILY SSF53335 15 191 4.96E-47 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS02655 19d94ce8ded0842b4b302d18b6106289 197 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 14 192 9.3E-45 T 09-03-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 NA29_RS02655 19d94ce8ded0842b4b302d18b6106289 197 Gene3D G3DSA:3.40.50.150 10 192 8.1E-60 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS02655 19d94ce8ded0842b4b302d18b6106289 197 Pfam PF03602 Conserved hypothetical protein 95 16 190 2.0E-49 T 09-03-2017 NA29_RS02655 19d94ce8ded0842b4b302d18b6106289 197 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 129 135 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 NA29_RS22150 086ab9ea846e0c68993bc5dfc4e1227a 173 SUPERFAMILY SSF101307 22 171 1.83E-38 T 09-03-2017 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 NA29_RS22150 086ab9ea846e0c68993bc5dfc4e1227a 173 Pfam PF04608 Phosphatidylglycerophosphatase A 28 170 6.4E-49 T 09-03-2017 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 NA29_RS22150 086ab9ea846e0c68993bc5dfc4e1227a 173 PIRSF PIRSF006162 18 173 5.8E-42 T 09-03-2017 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668 NA29_RS01145 7b3d4a2b77f0d64d58d91227a24168ef 301 Pfam PF00696 Amino acid kinase family 34 277 2.6E-46 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase NA29_RS01145 7b3d4a2b77f0d64d58d91227a24168ef 301 Gene3D G3DSA:3.40.1160.10 32 299 6.1E-102 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase NA29_RS01145 7b3d4a2b77f0d64d58d91227a24168ef 301 PIRSF PIRSF000728 19 300 2.5E-101 T 09-03-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 NA29_RS01145 7b3d4a2b77f0d64d58d91227a24168ef 301 TIGRFAM TIGR00761 argB: acetylglutamate kinase 35 275 2.7E-75 T 09-03-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 NA29_RS01145 7b3d4a2b77f0d64d58d91227a24168ef 301 Hamap MF_00082_B Acetylglutamate kinase [argB]. 32 300 35.875 T 09-03-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 NA29_RS01145 7b3d4a2b77f0d64d58d91227a24168ef 301 PRINTS PR00474 Glutamate 5-kinase family signature 250 270 2.1E-5 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 NA29_RS01145 7b3d4a2b77f0d64d58d91227a24168ef 301 PRINTS PR00474 Glutamate 5-kinase family signature 200 227 2.1E-5 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 NA29_RS01145 7b3d4a2b77f0d64d58d91227a24168ef 301 SUPERFAMILY SSF53633 17 300 3.01E-88 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase NA29_RS01145 7b3d4a2b77f0d64d58d91227a24168ef 301 Hamap MF_00082_A Acetylglutamate kinase [argB]. 35 285 28.812 T 09-03-2017 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 NA29_RS07605 28011cfa190b287eb6787e523331ea37 133 SUPERFAMILY SSF55298 1 131 1.15E-37 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS07605 28011cfa190b287eb6787e523331ea37 133 Pfam PF01042 Endoribonuclease L-PSP 14 129 2.3E-26 T 09-03-2017 IPR006175 YjgF/YER057c/UK114 family NA29_RS07605 28011cfa190b287eb6787e523331ea37 133 Gene3D G3DSA:3.30.1330.40 1 131 2.2E-45 T 09-03-2017 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like NA29_RS04170 ec7b6883c26243dd25e99b41dde9a45f 327 PIRSF PIRSF034367 1 327 1.8E-196 T 09-03-2017 IPR015004 Protein of unknown function DUF1852 NA29_RS04170 ec7b6883c26243dd25e99b41dde9a45f 327 Pfam PF08908 Domain of unknown function (DUF1852) 1 323 1.1E-184 T 09-03-2017 IPR015004 Protein of unknown function DUF1852 NA29_RS06985 84d81036f3dc5f34c192b4b81b4be625 241 Gene3D G3DSA:3.40.630.30 18 218 3.6E-57 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS06985 84d81036f3dc5f34c192b4b81b4be625 241 SUPERFAMILY SSF55729 28 202 1.69E-36 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS06985 84d81036f3dc5f34c192b4b81b4be625 241 Pfam PF13302 Acetyltransferase (GNAT) domain 39 178 1.3E-10 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS14040 0c2c2973de83a476836ab98678a2bac9 62 Pfam PF05433 Glycine zipper 2TM domain 24 61 2.5E-7 T 09-03-2017 IPR008816 Glycine zipper 2TM domain GO:0019867 NA29_RS07660 e2dd27ebff753b1d34112cc2c24b4ab3 104 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 24 96 3.2E-13 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS07660 e2dd27ebff753b1d34112cc2c24b4ab3 104 SUPERFAMILY SSF54292 11 104 1.91E-22 T 09-03-2017 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 NA29_RS07660 e2dd27ebff753b1d34112cc2c24b4ab3 104 Gene3D G3DSA:3.10.20.30 12 103 1.0E-20 T 09-03-2017 IPR012675 Beta-grasp domain NA29_RS07660 e2dd27ebff753b1d34112cc2c24b4ab3 104 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 49 57 - T 09-03-2017 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 NA29_RS16870 705dac42078f9093a763dd4fe380250f 569 SUPERFAMILY SSF51621 14 353 1.44E-84 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS16870 705dac42078f9093a763dd4fe380250f 569 Gene3D G3DSA:3.90.550.10 304 552 3.7E-25 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS16870 705dac42078f9093a763dd4fe380250f 569 TIGRFAM TIGR02320 PEP_mutase: phosphoenolpyruvate mutase 19 290 3.2E-124 T 09-03-2017 IPR012698 Phosphoenolpyruvate phosphomutase, core GO:0050188 KEGG: 00440+5.4.2.9|MetaCyc: PWY-5757|MetaCyc: PWY-6322|MetaCyc: PWY-6682|MetaCyc: PWY-6839|MetaCyc: PWY-7419|MetaCyc: PWY-7510 NA29_RS16870 705dac42078f9093a763dd4fe380250f 569 Pfam PF12804 MobA-like NTP transferase domain 309 426 5.7E-14 T 09-03-2017 IPR025877 MobA-like NTP transferase NA29_RS16870 705dac42078f9093a763dd4fe380250f 569 Pfam PF13714 Phosphoenolpyruvate phosphomutase 20 264 1.3E-69 T 09-03-2017 NA29_RS16870 705dac42078f9093a763dd4fe380250f 569 Gene3D G3DSA:3.20.20.60 14 284 5.4E-77 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS16870 705dac42078f9093a763dd4fe380250f 569 SUPERFAMILY SSF53448 307 549 5.18E-26 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS17285 a59e8f701722843551f0c0560b1a54e5 345 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 36 340 2.8E-102 T 09-03-2017 IPR010068 Periplasmic binding protein TauA GO:0015734|GO:0042597 NA29_RS17285 a59e8f701722843551f0c0560b1a54e5 345 SMART SM00062 35 253 2.9E-6 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS17285 a59e8f701722843551f0c0560b1a54e5 345 SUPERFAMILY SSF53850 34 257 3.63E-39 T 09-03-2017 NA29_RS17285 a59e8f701722843551f0c0560b1a54e5 345 Pfam PF09084 NMT1/THI5 like 61 253 1.2E-16 T 09-03-2017 IPR015168 SsuA/THI5-like NA29_RS17285 a59e8f701722843551f0c0560b1a54e5 345 Gene3D G3DSA:3.40.190.10 116 240 4.4E-23 T 09-03-2017 NA29_RS01010 3389e2570785a665995f7a0913ba614a 588 Pfam PF00263 Bacterial type II and III secretion system protein 370 460 2.2E-7 T 09-03-2017 IPR004846 Type II/III secretion system GO:0009306 NA29_RS01010 3389e2570785a665995f7a0913ba614a 588 Pfam PF07655 Secretin N-terminal domain 186 264 1.8E-7 T 09-03-2017 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 NA29_RS08240 98781d2ff33afad48d04f71384314ae2 520 SUPERFAMILY SSF56954 10 38 3.01E-97 T 09-03-2017 NA29_RS08240 98781d2ff33afad48d04f71384314ae2 520 SUPERFAMILY SSF56954 78 489 3.01E-97 T 09-03-2017 NA29_RS08240 98781d2ff33afad48d04f71384314ae2 520 Pfam PF02321 Outer membrane efflux protein 308 488 3.6E-24 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS08240 98781d2ff33afad48d04f71384314ae2 520 Pfam PF02321 Outer membrane efflux protein 87 280 1.4E-20 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 NA29_RS08240 98781d2ff33afad48d04f71384314ae2 520 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 20 489 6.4E-120 T 09-03-2017 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 NA29_RS08240 98781d2ff33afad48d04f71384314ae2 520 Gene3D G3DSA:1.20.1600.10 76 489 7.1E-96 T 09-03-2017 NA29_RS12740 9171c5f789467bcb74590c32609430ba 544 SMART SM00928 450 495 1.2E-16 T 09-03-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS12740 9171c5f789467bcb74590c32609430ba 544 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 170 340 2.5E-45 T 09-03-2017 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS12740 9171c5f789467bcb74590c32609430ba 544 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 463 474 - T 09-03-2017 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS12740 9171c5f789467bcb74590c32609430ba 544 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 453 533 5.2E-30 T 09-03-2017 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS12740 9171c5f789467bcb74590c32609430ba 544 SUPERFAMILY SSF140490 447 532 1.7E-27 T 09-03-2017 NA29_RS12740 9171c5f789467bcb74590c32609430ba 544 SUPERFAMILY SSF142019 121 361 4.71E-80 T 09-03-2017 NA29_RS12740 9171c5f789467bcb74590c32609430ba 544 SUPERFAMILY SSF142984 364 445 1.22E-20 T 09-03-2017 NA29_RS05650 f625824807cfc0136e154d6c4ac076d5 205 Gene3D G3DSA:3.30.530.20 1 154 1.5E-40 T 09-03-2017 IPR023393 START-like domain NA29_RS05650 f625824807cfc0136e154d6c4ac076d5 205 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 8 145 1.8E-25 T 09-03-2017 IPR010419 Carbon monoxide dehydrogenase subunit G NA29_RS05650 f625824807cfc0136e154d6c4ac076d5 205 SUPERFAMILY SSF55961 1 145 1.34E-28 T 09-03-2017 NA29_RS03070 ad7ef38b95c6e562cd85137ec6c6d14c 671 SUPERFAMILY SSF56349 228 288 5.18E-6 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NA29_RS03070 ad7ef38b95c6e562cd85137ec6c6d14c 671 SUPERFAMILY SSF56349 419 503 5.18E-6 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NA29_RS03070 ad7ef38b95c6e562cd85137ec6c6d14c 671 Gene3D G3DSA:1.10.443.10 227 287 6.5E-5 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS03070 ad7ef38b95c6e562cd85137ec6c6d14c 671 Gene3D G3DSA:1.10.443.10 366 374 6.5E-5 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS03070 ad7ef38b95c6e562cd85137ec6c6d14c 671 Gene3D G3DSA:1.10.443.10 436 508 6.5E-5 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS18440 5b09cb9d8d1f2e724a5538127078b119 424 Pfam PF02653 Branched-chain amino acid transport system / permease component 119 405 2.0E-51 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS18440 5b09cb9d8d1f2e724a5538127078b119 424 Pfam PF11862 Domain of unknown function (DUF3382) 20 110 2.7E-22 T 09-03-2017 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal NA29_RS22500 1aef02a96b1063a1f84f3f66a4fe2cb1 215 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 54 214 2.2E-42 T 09-03-2017 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 NA29_RS22500 1aef02a96b1063a1f84f3f66a4fe2cb1 215 Gene3D G3DSA:1.20.1260.10 47 187 2.2E-6 T 09-03-2017 IPR012347 Ferritin-related NA29_RS22500 1aef02a96b1063a1f84f3f66a4fe2cb1 215 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 7 215 30.972 T 09-03-2017 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 NA29_RS22500 1aef02a96b1063a1f84f3f66a4fe2cb1 215 SUPERFAMILY SSF47240 50 130 7.22E-16 T 09-03-2017 IPR009078 Ferritin-like superfamily NA29_RS22480 6938ced5f979caac37a8fcc4886613ff 591 SUPERFAMILY SSF56601 189 573 1.69E-86 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS22480 6938ced5f979caac37a8fcc4886613ff 591 Gene3D G3DSA:3.40.710.10 245 564 2.8E-83 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS22480 6938ced5f979caac37a8fcc4886613ff 591 Pfam PF03717 Penicillin-binding Protein dimerisation domain 75 222 7.6E-21 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 NA29_RS22480 6938ced5f979caac37a8fcc4886613ff 591 Pfam PF00905 Penicillin binding protein transpeptidase domain 264 559 3.0E-71 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 NA29_RS22480 6938ced5f979caac37a8fcc4886613ff 591 SUPERFAMILY SSF56519 70 237 1.44E-43 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 NA29_RS22480 6938ced5f979caac37a8fcc4886613ff 591 Gene3D G3DSA:3.90.1310.10 145 244 4.1E-29 T 09-03-2017 NA29_RS06000 a7867a444a5b01746b9ce865ed2cbca4 331 Gene3D G3DSA:1.10.3720.10 127 318 1.9E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS06000 a7867a444a5b01746b9ce865ed2cbca4 331 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 152 316 2.2E-14 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS06000 a7867a444a5b01746b9ce865ed2cbca4 331 SUPERFAMILY SSF161098 128 307 1.02E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16330 e1efb8c3160eec5d920ab21e1cd62646 214 Pfam PF04403 Paraquat-inducible protein A 47 203 5.4E-58 T 09-03-2017 IPR007498 Paraquat-inducible protein A NA29_RS06620 dc98eb49bdf6c1a8500ef87b14d68c43 397 Pfam PF13458 Periplasmic binding protein 33 366 3.2E-77 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS06620 dc98eb49bdf6c1a8500ef87b14d68c43 397 Gene3D G3DSA:3.40.50.2300 163 303 3.1E-26 T 09-03-2017 NA29_RS06620 dc98eb49bdf6c1a8500ef87b14d68c43 397 Gene3D G3DSA:3.40.50.2300 304 355 9.0E-42 T 09-03-2017 NA29_RS06620 dc98eb49bdf6c1a8500ef87b14d68c43 397 Gene3D G3DSA:3.40.50.2300 31 156 9.0E-42 T 09-03-2017 NA29_RS06620 dc98eb49bdf6c1a8500ef87b14d68c43 397 SUPERFAMILY SSF53822 34 369 6.28E-85 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS13055 111207278d60f5fa1c5b757ce424b71b 695 Pfam PF04632 Fusaric acid resistance protein family 12 680 1.0E-132 T 09-03-2017 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 NA29_RS09365 f139be7a8291e0ece94553cec4655ab4 337 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 7 336 46.166 T 09-03-2017 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 NA29_RS09365 f139be7a8291e0ece94553cec4655ab4 337 SUPERFAMILY SSF55681 91 336 7.02E-76 T 09-03-2017 NA29_RS09365 f139be7a8291e0ece94553cec4655ab4 337 Gene3D G3DSA:3.30.930.10 8 336 2.2E-126 T 09-03-2017 NA29_RS09365 f139be7a8291e0ece94553cec4655ab4 337 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 37 336 4.4E-99 T 09-03-2017 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 NA29_RS09365 f139be7a8291e0ece94553cec4655ab4 337 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 86 1.1E-19 T 09-03-2017 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 NA29_RS09365 f139be7a8291e0ece94553cec4655ab4 337 SUPERFAMILY SSF46589 13 98 8.89E-19 T 09-03-2017 IPR010978 tRNA-binding arm GO:0000166 NA29_RS09365 f139be7a8291e0ece94553cec4655ab4 337 Pfam PF01409 tRNA synthetases class II core domain (F) 91 336 1.1E-96 T 09-03-2017 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 NA29_RS13625 d5c39a7102b5cb7db981e464c54ba857 287 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 15 277 2.4E-126 T 09-03-2017 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 NA29_RS13625 d5c39a7102b5cb7db981e464c54ba857 287 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 13 273 2.8E-96 T 09-03-2017 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 NA29_RS13625 d5c39a7102b5cb7db981e464c54ba857 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 278 3.9E-29 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS13625 d5c39a7102b5cb7db981e464c54ba857 287 Gene3D G3DSA:1.10.3720.10 25 279 2.3E-52 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS13625 d5c39a7102b5cb7db981e464c54ba857 287 SUPERFAMILY SSF161098 22 270 6.07E-54 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS09540 f53b2c0bdec1c42691e7d78de958d879 213 Gene3D G3DSA:2.60.40.420 64 146 2.4E-7 T 09-03-2017 IPR008972 Cupredoxin NA29_RS09540 f53b2c0bdec1c42691e7d78de958d879 213 SUPERFAMILY SSF49503 69 179 1.7E-15 T 09-03-2017 IPR008972 Cupredoxin NA29_RS20740 e19a6774388dc84d9802f2785bc5d9d3 391 SUPERFAMILY SSF53850 42 368 1.95E-28 T 09-03-2017 NA29_RS20740 e19a6774388dc84d9802f2785bc5d9d3 391 Gene3D G3DSA:3.40.190.10 157 256 2.1E-7 T 09-03-2017 NA29_RS20740 e19a6774388dc84d9802f2785bc5d9d3 391 Gene3D G3DSA:3.40.190.10 14 136 1.0E-13 T 09-03-2017 NA29_RS20740 e19a6774388dc84d9802f2785bc5d9d3 391 Gene3D G3DSA:3.40.190.10 287 347 1.0E-13 T 09-03-2017 NA29_RS20740 e19a6774388dc84d9802f2785bc5d9d3 391 Pfam PF13416 Bacterial extracellular solute-binding protein 53 344 1.0E-33 T 09-03-2017 NA29_RS11745 537c907738202b8ae2e6b8275bfe1f22 147 SUPERFAMILY SSF160719 28 134 2.75E-29 T 09-03-2017 NA29_RS11745 537c907738202b8ae2e6b8275bfe1f22 147 Gene3D G3DSA:3.10.450.40 4 135 1.6E-41 T 09-03-2017 NA29_RS11745 537c907738202b8ae2e6b8275bfe1f22 147 Pfam PF04965 Gene 25-like lysozyme 31 121 9.6E-23 T 09-03-2017 IPR007048 GpW/Gp25/anti-adapter protein IraD NA29_RS04480 94ba7d38677b643a78c521286db04281 318 Gene3D G3DSA:1.10.10.10 1 81 1.7E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04480 94ba7d38677b643a78c521286db04281 318 SUPERFAMILY SSF53850 92 270 5.79E-19 T 09-03-2017 NA29_RS04480 94ba7d38677b643a78c521286db04281 318 SUPERFAMILY SSF46785 1 86 9.6E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS04480 94ba7d38677b643a78c521286db04281 318 Gene3D G3DSA:3.40.190.10 82 177 8.2E-7 T 09-03-2017 NA29_RS04480 94ba7d38677b643a78c521286db04281 318 Pfam PF03466 LysR substrate binding domain 91 315 9.6E-20 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS04480 94ba7d38677b643a78c521286db04281 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04480 94ba7d38677b643a78c521286db04281 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04480 94ba7d38677b643a78c521286db04281 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04480 94ba7d38677b643a78c521286db04281 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS04480 94ba7d38677b643a78c521286db04281 318 Gene3D G3DSA:3.40.190.10 209 267 1.4E-6 T 09-03-2017 NA29_RS18810 ab5ecedb01b4f8c7f2a63c30ff0c084a 144 Gene3D G3DSA:1.20.1290.10 4 133 1.4E-25 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS18810 ab5ecedb01b4f8c7f2a63c30ff0c084a 144 SUPERFAMILY SSF69118 4 123 3.84E-35 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS18810 ab5ecedb01b4f8c7f2a63c30ff0c084a 144 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 115 1.9E-21 T 09-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS18810 ab5ecedb01b4f8c7f2a63c30ff0c084a 144 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 4 124 1.1E-54 T 09-03-2017 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 NA29_RS19540 4e1f43e61e3e6fefe4e76851d2fffedf 283 SUPERFAMILY SSF53448 1 226 1.69E-32 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS19540 4e1f43e61e3e6fefe4e76851d2fffedf 283 Gene3D G3DSA:3.90.550.10 2 235 8.3E-30 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS19540 4e1f43e61e3e6fefe4e76851d2fffedf 283 Pfam PF00535 Glycosyl transferase family 2 3 110 3.9E-15 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 NA29_RS05870 30c0e7c98a07a3deb62e9bea6d3e0760 215 PIRSF PIRSF000190 2 215 1.1E-80 T 09-03-2017 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 NA29_RS05870 30c0e7c98a07a3deb62e9bea6d3e0760 215 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 184 197 - T 09-03-2017 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 NA29_RS05870 30c0e7c98a07a3deb62e9bea6d3e0760 215 Gene3D G3DSA:2.30.110.10 13 215 4.2E-84 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS05870 30c0e7c98a07a3deb62e9bea6d3e0760 215 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 37 122 9.0E-28 T 09-03-2017 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 NA29_RS05870 30c0e7c98a07a3deb62e9bea6d3e0760 215 SUPERFAMILY SSF50475 10 215 3.37E-67 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS05870 30c0e7c98a07a3deb62e9bea6d3e0760 215 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 215 7.4E-87 T 09-03-2017 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 NA29_RS05870 30c0e7c98a07a3deb62e9bea6d3e0760 215 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 174 215 1.7E-19 T 09-03-2017 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 NA29_RS05870 30c0e7c98a07a3deb62e9bea6d3e0760 215 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 13 215 40.191 T 09-03-2017 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 NA29_RS22385 86b4fb9bfdcca9f32f5cdb77f2981604 251 SUPERFAMILY SSF160950 2 249 5.75E-86 T 09-03-2017 NA29_RS22385 86b4fb9bfdcca9f32f5cdb77f2981604 251 Pfam PF07072 Protein of unknown function (DUF1342) 16 225 3.7E-79 T 09-03-2017 IPR009777 Cell division protein ZapD NA29_RS22385 86b4fb9bfdcca9f32f5cdb77f2981604 251 Gene3D G3DSA:2.60.440.10 172 249 7.2E-20 T 09-03-2017 IPR027462 Z ring-associated protein D, C-terminal domain NA29_RS22385 86b4fb9bfdcca9f32f5cdb77f2981604 251 Gene3D G3DSA:1.10.3900.10 10 171 1.3E-62 T 09-03-2017 NA29_RS22385 86b4fb9bfdcca9f32f5cdb77f2981604 251 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 249 32.663 T 09-03-2017 IPR009777 Cell division protein ZapD NA29_RS17835 9020366676a492990f48dfb8bb319886 290 SUPERFAMILY SSF51735 5 172 2.51E-47 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS17835 9020366676a492990f48dfb8bb319886 290 Pfam PF02153 Prephenate dehydrogenase 18 274 2.5E-70 T 09-03-2017 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 NA29_RS17835 9020366676a492990f48dfb8bb319886 290 SUPERFAMILY SSF48179 178 284 1.47E-33 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 NA29_RS17835 9020366676a492990f48dfb8bb319886 290 Gene3D G3DSA:3.40.50.720 3 182 7.3E-42 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS05930 7406dea5b970ac59dac9eb91d1b11845 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.5E-15 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS05930 7406dea5b970ac59dac9eb91d1b11845 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.5E-15 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS05930 7406dea5b970ac59dac9eb91d1b11845 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.5E-15 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS05930 7406dea5b970ac59dac9eb91d1b11845 157 Gene3D G3DSA:1.10.10.10 6 54 1.1E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05930 7406dea5b970ac59dac9eb91d1b11845 157 Gene3D G3DSA:3.30.70.920 56 150 7.5E-25 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS05930 7406dea5b970ac59dac9eb91d1b11845 157 SUPERFAMILY SSF54909 64 148 3.62E-19 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS05930 7406dea5b970ac59dac9eb91d1b11845 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 1.3E-17 T 09-03-2017 NA29_RS05930 7406dea5b970ac59dac9eb91d1b11845 157 SUPERFAMILY SSF46785 2 92 8.76E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05930 7406dea5b970ac59dac9eb91d1b11845 157 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 1.3E-20 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS05930 7406dea5b970ac59dac9eb91d1b11845 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 09-03-2017 IPR019885 Transcription regulator HTH, AsnC-type, conserved site NA29_RS05930 7406dea5b970ac59dac9eb91d1b11845 157 SMART SM00344 3 112 3.1E-35 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NA29_RS05215 93340f9866e41b1d8c224402ed13dd1c 199 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 19 194 8.9E-68 T 09-03-2017 IPR010195 Uncharacterised peroxidase-related NA29_RS05215 93340f9866e41b1d8c224402ed13dd1c 199 Pfam PF02627 Carboxymuconolactone decarboxylase family 57 136 9.8E-14 T 09-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS05215 93340f9866e41b1d8c224402ed13dd1c 199 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 75 104 3.8E-9 T 09-03-2017 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS05215 93340f9866e41b1d8c224402ed13dd1c 199 Gene3D G3DSA:1.20.1290.10 76 195 3.4E-39 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS05215 93340f9866e41b1d8c224402ed13dd1c 199 SUPERFAMILY SSF69118 13 192 2.16E-47 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS18105 6200b588b77272f5d6a72f528299b6f2 85 SUPERFAMILY SSF47598 2 42 1.22E-7 T 09-03-2017 IPR010985 Ribbon-helix-helix GO:0006355 NA29_RS18105 6200b588b77272f5d6a72f528299b6f2 85 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 1 70 2.1E-21 T 09-03-2017 IPR022789 Antitoxin ParD NA29_RS18105 6200b588b77272f5d6a72f528299b6f2 85 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 4 54 1.7E-10 T 09-03-2017 IPR022789 Antitoxin ParD NA29_RS15645 688fb642f4b4b2af2bbd855966c5b2e8 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS15645 688fb642f4b4b2af2bbd855966c5b2e8 237 Pfam PF00005 ABC transporter 21 165 7.8E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS15645 688fb642f4b4b2af2bbd855966c5b2e8 237 PIRSF PIRSF039137 1 237 5.3E-101 T 09-03-2017 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 NA29_RS15645 688fb642f4b4b2af2bbd855966c5b2e8 237 SUPERFAMILY SSF52540 4 235 2.24E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15645 688fb642f4b4b2af2bbd855966c5b2e8 237 Gene3D G3DSA:3.40.50.300 3 231 1.6E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15645 688fb642f4b4b2af2bbd855966c5b2e8 237 SMART SM00382 29 201 1.4E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS01710 26df2718390d312bbd44156a9c3046ef 99 Pfam PF12778 PXPV repeat (3 copies) 32 53 2.0E-6 T 09-03-2017 IPR024446 PXPV repeat NA29_RS01710 26df2718390d312bbd44156a9c3046ef 99 Pfam PF12778 PXPV repeat (3 copies) 48 67 0.0058 T 09-03-2017 IPR024446 PXPV repeat NA29_RS05475 03c46c49a2da66e6b2201e9c3a5f9a09 318 SUPERFAMILY SSF161098 89 274 6.41E-36 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS05475 03c46c49a2da66e6b2201e9c3a5f9a09 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 273 2.5E-21 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS05475 03c46c49a2da66e6b2201e9c3a5f9a09 318 Gene3D G3DSA:1.10.3720.10 87 274 1.5E-29 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS02560 4d8ee5a1f7fd7cc1df61db8dbdd250f0 241 Pfam PF02104 SURF1 family 13 214 7.0E-30 T 09-03-2017 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS22775 35f713a7be526681a2ed87237d9f9eae 125 Pfam PF04138 GtrA-like protein 10 122 6.5E-18 T 09-03-2017 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 NA29_RS05410 c6d6569c8a645f9d794be0206d7b1ef3 461 Gene3D G3DSA:3.90.1150.10 5 68 2.7E-40 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS05410 c6d6569c8a645f9d794be0206d7b1ef3 461 Gene3D G3DSA:3.90.1150.10 349 457 2.7E-40 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS05410 c6d6569c8a645f9d794be0206d7b1ef3 461 Pfam PF00202 Aminotransferase class-III 35 450 2.6E-86 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS05410 c6d6569c8a645f9d794be0206d7b1ef3 461 SUPERFAMILY SSF53383 5 454 1.57E-113 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS05410 c6d6569c8a645f9d794be0206d7b1ef3 461 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS05410 c6d6569c8a645f9d794be0206d7b1ef3 461 Gene3D G3DSA:3.40.640.10 70 346 3.2E-78 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS12325 0309f1fb3642d5a59351b73e844df893 564 Gene3D G3DSA:3.30.70.270 397 561 5.2E-35 T 09-03-2017 NA29_RS12325 0309f1fb3642d5a59351b73e844df893 564 Pfam PF00990 Diguanylate cyclase, GGDEF domain 396 560 5.9E-27 T 09-03-2017 IPR000160 GGDEF domain NA29_RS12325 0309f1fb3642d5a59351b73e844df893 564 SMART SM00267 384 564 6.8E-29 T 09-03-2017 IPR000160 GGDEF domain NA29_RS12325 0309f1fb3642d5a59351b73e844df893 564 SUPERFAMILY SSF55073 400 561 4.16E-28 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS12325 0309f1fb3642d5a59351b73e844df893 564 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 391 562 4.5E-25 T 09-03-2017 IPR000160 GGDEF domain NA29_RS02010 62218ed556100a36e1dfd0e03d06332b 460 Gene3D G3DSA:3.90.1150.10 350 450 4.0E-43 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS02010 62218ed556100a36e1dfd0e03d06332b 460 Gene3D G3DSA:3.90.1150.10 13 72 4.0E-43 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS02010 62218ed556100a36e1dfd0e03d06332b 460 Gene3D G3DSA:3.40.640.10 73 347 1.3E-88 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS02010 62218ed556100a36e1dfd0e03d06332b 460 PIRSF PIRSF000521 24 448 1.5E-28 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS02010 62218ed556100a36e1dfd0e03d06332b 460 SUPERFAMILY SSF53383 19 446 6.35E-118 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS02010 62218ed556100a36e1dfd0e03d06332b 460 Pfam PF00202 Aminotransferase class-III 36 440 5.6E-108 T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS02010 62218ed556100a36e1dfd0e03d06332b 460 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 22 443 1.0E-151 T 09-03-2017 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 NA29_RS02010 62218ed556100a36e1dfd0e03d06332b 460 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 259 296 - T 09-03-2017 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 NA29_RS15865 4750f9806855dcfcad34e1930f9a8726 437 Gene3D G3DSA:3.40.630.10 31 249 9.2E-70 T 09-03-2017 NA29_RS15865 4750f9806855dcfcad34e1930f9a8726 437 Gene3D G3DSA:3.40.630.10 380 435 9.2E-70 T 09-03-2017 NA29_RS15865 4750f9806855dcfcad34e1930f9a8726 437 Gene3D G3DSA:3.30.70.360 250 352 1.5E-25 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS15865 4750f9806855dcfcad34e1930f9a8726 437 SUPERFAMILY SSF53187 365 435 2.15E-57 T 09-03-2017 NA29_RS15865 4750f9806855dcfcad34e1930f9a8726 437 SUPERFAMILY SSF53187 30 246 2.15E-57 T 09-03-2017 NA29_RS15865 4750f9806855dcfcad34e1930f9a8726 437 PIRSF PIRSF001235 23 437 1.4E-103 T 09-03-2017 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 NA29_RS15865 4750f9806855dcfcad34e1930f9a8726 437 Pfam PF01546 Peptidase family M20/M25/M40 98 433 2.5E-25 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NA29_RS15865 4750f9806855dcfcad34e1930f9a8726 437 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 35 432 2.9E-79 T 09-03-2017 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 NA29_RS15865 4750f9806855dcfcad34e1930f9a8726 437 SUPERFAMILY SSF55031 240 357 4.71E-17 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS01800 0222fbc38d65714cbb5049f15dc27826 239 Gene3D G3DSA:2.60.120.10 4 237 2.3E-77 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS01800 0222fbc38d65714cbb5049f15dc27826 239 SUPERFAMILY SSF51182 1 233 6.93E-78 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS01800 0222fbc38d65714cbb5049f15dc27826 239 PIRSF PIRSF006232 1 239 1.7E-53 T 09-03-2017 IPR012093 Pirin NA29_RS01800 0222fbc38d65714cbb5049f15dc27826 239 Pfam PF02678 Pirin 10 119 1.4E-35 T 09-03-2017 IPR003829 Pirin, N-terminal domain NA29_RS19375 ed89ebc415778aa14f08bd0b23765fb9 376 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 111 126 - T 09-03-2017 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 NA29_RS19375 ed89ebc415778aa14f08bd0b23765fb9 376 SUPERFAMILY SSF52540 23 269 1.88E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19375 ed89ebc415778aa14f08bd0b23765fb9 376 Pfam PF00158 Sigma-54 interaction domain 25 189 8.3E-63 T 09-03-2017 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 NA29_RS19375 ed89ebc415778aa14f08bd0b23765fb9 376 Gene3D G3DSA:3.40.50.300 22 197 1.3E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS19375 ed89ebc415778aa14f08bd0b23765fb9 376 SMART SM00382 44 188 8.4E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS19375 ed89ebc415778aa14f08bd0b23765fb9 376 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 341 361 2.1E-8 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS19375 ed89ebc415778aa14f08bd0b23765fb9 376 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 324 341 2.1E-8 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS19375 ed89ebc415778aa14f08bd0b23765fb9 376 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 48 61 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 NA29_RS19375 ed89ebc415778aa14f08bd0b23765fb9 376 Pfam PF02954 Bacterial regulatory protein, Fis family 320 358 3.3E-12 T 09-03-2017 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 NA29_RS19375 ed89ebc415778aa14f08bd0b23765fb9 376 Gene3D G3DSA:1.10.8.60 198 275 9.0E-13 T 09-03-2017 NA29_RS19375 ed89ebc415778aa14f08bd0b23765fb9 376 Gene3D G3DSA:1.10.10.60 319 357 1.7E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS19375 ed89ebc415778aa14f08bd0b23765fb9 376 SUPERFAMILY SSF46689 317 360 3.51E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS16090 48fa59e4d144474d9d020c99426c5bc7 521 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 5 482 4.9E-162 T 09-03-2017 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16090 48fa59e4d144474d9d020c99426c5bc7 521 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 233 257 1.4E-33 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16090 48fa59e4d144474d9d020c99426c5bc7 521 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 136 155 1.4E-33 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16090 48fa59e4d144474d9d020c99426c5bc7 521 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 166 190 1.4E-33 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16090 48fa59e4d144474d9d020c99426c5bc7 521 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 373 399 1.4E-33 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16090 48fa59e4d144474d9d020c99426c5bc7 521 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 321 340 1.4E-33 T 09-03-2017 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS16090 48fa59e4d144474d9d020c99426c5bc7 521 Pfam PF00361 Proton-conducting membrane transporter 130 415 3.9E-66 T 09-03-2017 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS15820 299a660e425d060320c5a623a1b75561 591 SUPERFAMILY SSF51905 521 582 3.62E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS15820 299a660e425d060320c5a623a1b75561 591 SUPERFAMILY SSF51905 5 341 3.62E-52 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS15820 299a660e425d060320c5a623a1b75561 591 SUPERFAMILY SSF54373 437 492 3.69E-6 T 09-03-2017 NA29_RS15820 299a660e425d060320c5a623a1b75561 591 Pfam PF00732 GMC oxidoreductase 204 344 1.2E-10 T 09-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 NA29_RS15820 299a660e425d060320c5a623a1b75561 591 Gene3D G3DSA:3.50.50.60 454 467 2.5E-59 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS15820 299a660e425d060320c5a623a1b75561 591 Gene3D G3DSA:3.50.50.60 243 349 2.5E-59 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS15820 299a660e425d060320c5a623a1b75561 591 Gene3D G3DSA:3.50.50.60 5 158 2.5E-59 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS15820 299a660e425d060320c5a623a1b75561 591 Gene3D G3DSA:3.50.50.60 512 580 2.5E-59 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS15820 299a660e425d060320c5a623a1b75561 591 Pfam PF05199 GMC oxidoreductase 452 571 6.1E-21 T 09-03-2017 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 NA29_RS01600 5da22ba14e94cb891fd40693795a89ab 587 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 409 551 2.2E-10 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01600 5da22ba14e94cb891fd40693795a89ab 587 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 305 7.6E-13 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01600 5da22ba14e94cb891fd40693795a89ab 587 SUPERFAMILY SSF161098 35 307 6.38E-47 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01600 5da22ba14e94cb891fd40693795a89ab 587 Gene3D G3DSA:1.10.3720.10 325 571 4.3E-37 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01600 5da22ba14e94cb891fd40693795a89ab 587 Gene3D G3DSA:1.10.3720.10 32 298 1.8E-39 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS01600 5da22ba14e94cb891fd40693795a89ab 587 SUPERFAMILY SSF161098 325 583 2.29E-40 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS02625 c759d54bd6e1d3331d09bbf619960d8f 208 Pfam PF01810 LysE type translocator 14 205 1.2E-36 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS23625 d3fe69081282abac9aa8166105541b4b 282 Gene3D G3DSA:2.40.160.20 29 282 3.2E-63 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NA29_RS23625 d3fe69081282abac9aa8166105541b4b 282 Pfam PF03922 OmpW family 54 282 3.0E-26 T 09-03-2017 IPR005618 Outer membrane protein, OmpW GO:0019867 NA29_RS23625 d3fe69081282abac9aa8166105541b4b 282 SUPERFAMILY SSF56925 136 182 5.49E-18 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NA29_RS23625 d3fe69081282abac9aa8166105541b4b 282 SUPERFAMILY SSF56925 209 282 5.49E-18 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NA29_RS23625 d3fe69081282abac9aa8166105541b4b 282 SUPERFAMILY SSF56925 79 111 5.49E-18 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NA29_RS10845 c1d0cc54f1be1c7be47ec9630402bafe 230 SUPERFAMILY SSF48317 3 147 2.88E-14 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NA29_RS10845 c1d0cc54f1be1c7be47ec9630402bafe 230 Gene3D G3DSA:1.20.144.10 74 146 5.0E-9 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NA29_RS10845 c1d0cc54f1be1c7be47ec9630402bafe 230 Pfam PF01569 PAP2 superfamily 70 146 5.9E-9 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase NA29_RS18925 7da8b00973601937a5674b71baa75153 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 313 1.1E-39 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS18925 7da8b00973601937a5674b71baa75153 314 SUPERFAMILY SSF161098 91 295 1.87E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS18925 7da8b00973601937a5674b71baa75153 314 Gene3D G3DSA:1.10.3720.10 89 308 9.7E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS11200 f689bd7624ec7e7a8a9d7daa3173a3c6 499 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 33 462 3.5E-77 T 09-03-2017 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 NA29_RS23515 67488011413270ddc85a42d901d22a56 266 PIRSF PIRSF006648 8 263 6.6E-21 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS23515 67488011413270ddc85a42d901d22a56 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 68 90 8.2E-8 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS23515 67488011413270ddc85a42d901d22a56 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 186 205 8.2E-8 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS23515 67488011413270ddc85a42d901d22a56 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 206 225 8.2E-8 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS23515 67488011413270ddc85a42d901d22a56 266 Pfam PF01061 ABC-2 type transporter 19 229 9.2E-36 T 09-03-2017 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 NA29_RS16420 1eca57c6b81dd6803758a07569bdda91 113 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 11 94 2.6E-36 T 09-03-2017 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 NA29_RS14070 00817d238832cd695470e5e78159d7bc 285 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 283 2.3E-116 T 09-03-2017 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 NA29_RS14070 00817d238832cd695470e5e78159d7bc 285 Pfam PF08543 Phosphomethylpyrimidine kinase 75 253 5.6E-16 T 09-03-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 NA29_RS14070 00817d238832cd695470e5e78159d7bc 285 SUPERFAMILY SSF53613 1 271 1.33E-73 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS14070 00817d238832cd695470e5e78159d7bc 285 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 285 53.767 T 09-03-2017 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 NA29_RS14070 00817d238832cd695470e5e78159d7bc 285 Gene3D G3DSA:3.40.1190.20 1 282 8.1E-88 T 09-03-2017 IPR029056 Ribokinase-like NA29_RS12240 e1e9a2b39cd4d94c6fef443855774954 262 Pfam PF07103 Protein of unknown function (DUF1365) 18 253 8.4E-65 T 09-03-2017 IPR010775 Protein of unknown function DUF1365 NA29_RS08615 e1b5e9fbce52380a4f60fa4f6a4e2945 371 Gene3D G3DSA:3.40.630.30 179 363 2.2E-61 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS08615 e1b5e9fbce52380a4f60fa4f6a4e2945 371 SMART SM01006 201 248 5.4E-18 T 09-03-2017 IPR019432 Siderophore biosynthesis protein, conserved domain NA29_RS08615 e1b5e9fbce52380a4f60fa4f6a4e2945 371 Pfam PF13523 Acetyltransferase (GNAT) domain 207 349 3.0E-50 T 09-03-2017 NA29_RS08615 e1b5e9fbce52380a4f60fa4f6a4e2945 371 SUPERFAMILY SSF55729 169 362 4.93E-56 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS05885 03e652eb640aa48ee65d17cc3721b27f 550 Pfam PF00501 AMP-binding enzyme 31 460 3.0E-107 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS05885 03e652eb640aa48ee65d17cc3721b27f 550 Gene3D G3DSA:3.30.300.30 457 550 2.8E-30 T 09-03-2017 NA29_RS05885 03e652eb640aa48ee65d17cc3721b27f 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS05885 03e652eb640aa48ee65d17cc3721b27f 550 SUPERFAMILY SSF56801 20 550 3.79E-145 T 09-03-2017 NA29_RS05885 03e652eb640aa48ee65d17cc3721b27f 550 Gene3D G3DSA:3.40.50.980 185 216 5.2E-35 T 09-03-2017 NA29_RS05885 03e652eb640aa48ee65d17cc3721b27f 550 Gene3D G3DSA:3.40.50.980 24 152 5.2E-35 T 09-03-2017 NA29_RS05885 03e652eb640aa48ee65d17cc3721b27f 550 Gene3D G3DSA:3.40.50.980 217 379 9.6E-43 T 09-03-2017 NA29_RS05885 03e652eb640aa48ee65d17cc3721b27f 550 Gene3D G3DSA:2.30.38.10 380 451 8.4E-30 T 09-03-2017 NA29_RS05885 03e652eb640aa48ee65d17cc3721b27f 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 4.8E-19 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS13530 9545ff75f30d80e4ab9cf6bd1b800863 153 Pfam PF00578 AhpC/TSA family 6 132 7.5E-36 T 09-03-2017 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 NA29_RS13530 9545ff75f30d80e4ab9cf6bd1b800863 153 SUPERFAMILY SSF52833 4 153 1.17E-51 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS13530 9545ff75f30d80e4ab9cf6bd1b800863 153 PIRSF PIRSF000239 1 153 1.7E-29 T 09-03-2017 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 NA29_RS13530 9545ff75f30d80e4ab9cf6bd1b800863 153 Gene3D G3DSA:3.40.30.10 3 153 2.5E-48 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS11085 86776b2ac7575ecf0975d1bce8e902b6 466 Gene3D G3DSA:3.30.450.20 13 121 4.1E-24 T 09-03-2017 NA29_RS11085 86776b2ac7575ecf0975d1bce8e902b6 466 SUPERFAMILY SSF55785 14 120 1.44E-22 T 09-03-2017 IPR000014 PAS domain NA29_RS11085 86776b2ac7575ecf0975d1bce8e902b6 466 SUPERFAMILY SSF55781 119 295 3.93E-9 T 09-03-2017 IPR029016 GAF domain-like NA29_RS11085 86776b2ac7575ecf0975d1bce8e902b6 466 Pfam PF08447 PAS fold 30 105 6.0E-13 T 09-03-2017 IPR013655 PAS fold-3 GO:0005515 NA29_RS11085 86776b2ac7575ecf0975d1bce8e902b6 466 SMART SM00267 289 461 2.7E-47 T 09-03-2017 IPR000160 GGDEF domain NA29_RS11085 86776b2ac7575ecf0975d1bce8e902b6 466 Gene3D G3DSA:3.30.450.40 122 292 1.2E-7 T 09-03-2017 IPR029016 GAF domain-like NA29_RS11085 86776b2ac7575ecf0975d1bce8e902b6 466 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 122 2.5E-18 T 09-03-2017 IPR000014 PAS domain NA29_RS11085 86776b2ac7575ecf0975d1bce8e902b6 466 SUPERFAMILY SSF55073 305 456 7.46E-42 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS11085 86776b2ac7575ecf0975d1bce8e902b6 466 Pfam PF00990 Diguanylate cyclase, GGDEF domain 300 455 1.1E-39 T 09-03-2017 IPR000160 GGDEF domain NA29_RS11085 86776b2ac7575ecf0975d1bce8e902b6 466 SMART SM00091 7 73 7.0E-10 T 09-03-2017 IPR000014 PAS domain NA29_RS11085 86776b2ac7575ecf0975d1bce8e902b6 466 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 298 455 2.4E-40 T 09-03-2017 IPR000160 GGDEF domain NA29_RS11085 86776b2ac7575ecf0975d1bce8e902b6 466 Gene3D G3DSA:3.30.70.270 302 456 4.7E-47 T 09-03-2017 NA29_RS03860 e8c25f6fa129f4599726fd531f8f1e9a 554 Pfam PF05199 GMC oxidoreductase 386 522 5.0E-40 T 09-03-2017 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 NA29_RS03860 e8c25f6fa129f4599726fd531f8f1e9a 554 SUPERFAMILY SSF51905 471 531 3.17E-89 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03860 e8c25f6fa129f4599726fd531f8f1e9a 554 SUPERFAMILY SSF51905 1 288 3.17E-89 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03860 e8c25f6fa129f4599726fd531f8f1e9a 554 Gene3D G3DSA:3.50.50.60 2 126 2.0E-125 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03860 e8c25f6fa129f4599726fd531f8f1e9a 554 Gene3D G3DSA:3.50.50.60 187 313 2.0E-125 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03860 e8c25f6fa129f4599726fd531f8f1e9a 554 Gene3D G3DSA:3.50.50.60 471 531 2.0E-125 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS03860 e8c25f6fa129f4599726fd531f8f1e9a 554 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 254 268 - T 09-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 NA29_RS03860 e8c25f6fa129f4599726fd531f8f1e9a 554 PIRSF PIRSF000137 1 538 3.0E-156 T 09-03-2017 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 NA29_RS03860 e8c25f6fa129f4599726fd531f8f1e9a 554 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 09-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 NA29_RS03860 e8c25f6fa129f4599726fd531f8f1e9a 554 SUPERFAMILY SSF54373 290 472 8.14E-59 T 09-03-2017 NA29_RS03860 e8c25f6fa129f4599726fd531f8f1e9a 554 Gene3D G3DSA:3.30.410.10 324 470 5.4E-6 T 09-03-2017 NA29_RS03860 e8c25f6fa129f4599726fd531f8f1e9a 554 Pfam PF00732 GMC oxidoreductase 5 295 2.7E-86 T 09-03-2017 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 NA29_RS19905 e0e0f31edbbcf284ef102852dce7f2a6 377 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 39 350 1.7E-110 T 09-03-2017 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 NA29_RS19905 e0e0f31edbbcf284ef102852dce7f2a6 377 Pfam PF02445 Quinolinate synthetase A protein 43 348 8.9E-103 T 09-03-2017 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 NA29_RS19905 e0e0f31edbbcf284ef102852dce7f2a6 377 SUPERFAMILY SSF142754 40 349 1.31E-107 T 09-03-2017 NA29_RS19905 e0e0f31edbbcf284ef102852dce7f2a6 377 Hamap MF_00567 Quinolinate synthase A [nadA]. 6 356 65.951 T 09-03-2017 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 NA29_RS19470 9d56733df29c69fae295d4f5933fb323 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 276 1.9E-21 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS19470 9d56733df29c69fae295d4f5933fb323 281 Gene3D G3DSA:1.10.3720.10 4 270 2.7E-56 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS19470 9d56733df29c69fae295d4f5933fb323 281 SUPERFAMILY SSF161098 4 277 1.44E-61 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS10620 57f3f2b8a00a7643efa2007e0d083d3d 190 Pfam PF03729 Short repeat of unknown function (DUF308) 128 177 8.4E-5 T 09-03-2017 IPR005325 Protein of unknown function DUF308, membrane NA29_RS10620 57f3f2b8a00a7643efa2007e0d083d3d 190 Pfam PF03729 Short repeat of unknown function (DUF308) 14 83 1.3E-12 T 09-03-2017 IPR005325 Protein of unknown function DUF308, membrane NA29_RS10620 57f3f2b8a00a7643efa2007e0d083d3d 190 Pfam PF03729 Short repeat of unknown function (DUF308) 72 141 7.1E-9 T 09-03-2017 IPR005325 Protein of unknown function DUF308, membrane NA29_RS20400 76c7882764b23b3ca4447a7cb2f4f115 1490 Pfam PF13116 Protein of unknown function 650 933 3.9E-57 T 09-03-2017 IPR025263 Domain of unknown function DUF3971 NA29_RS20400 76c7882764b23b3ca4447a7cb2f4f115 1490 Pfam PF13502 AsmA-like C-terminal region 1192 1452 8.2E-58 T 09-03-2017 IPR032712 AsmA-like, C-terminal NA29_RS20400 76c7882764b23b3ca4447a7cb2f4f115 1490 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 543 1456 2.1E-156 T 09-03-2017 IPR011836 Conserved hypothetical protein CHP02099 NA29_RS22935 ee011cfe01c6badcc1778687d11317d2 310 Gene3D G3DSA:3.40.50.720 272 303 8.9E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22935 ee011cfe01c6badcc1778687d11317d2 310 Gene3D G3DSA:3.40.50.720 4 237 8.9E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22935 ee011cfe01c6badcc1778687d11317d2 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 207 1.3E-17 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NA29_RS22935 ee011cfe01c6badcc1778687d11317d2 310 SUPERFAMILY SSF51735 4 230 1.47E-42 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS22935 ee011cfe01c6badcc1778687d11317d2 310 SUPERFAMILY SSF51735 265 300 1.47E-42 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS03510 6247bf22f4ea53488045c73be18bf407 157 SUPERFAMILY SSF54427 3 142 1.52E-30 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS03510 6247bf22f4ea53488045c73be18bf407 157 Pfam PF13577 SnoaL-like domain 11 132 4.0E-19 T 09-03-2017 IPR009959 Polyketide cyclase SnoaL-like domain NA29_RS03510 6247bf22f4ea53488045c73be18bf407 157 Gene3D G3DSA:3.10.450.50 3 143 1.6E-25 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS12320 dedd06c34e983dda66abc5f4850843ae 476 SUPERFAMILY SSF89796 219 472 1.23E-55 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS12320 dedd06c34e983dda66abc5f4850843ae 476 SUPERFAMILY SSF89796 34 202 8.89E-23 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS12320 dedd06c34e983dda66abc5f4850843ae 476 Gene3D G3DSA:3.40.50.10540 36 150 5.2E-7 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS12320 dedd06c34e983dda66abc5f4850843ae 476 Gene3D G3DSA:3.40.50.10540 215 419 9.0E-62 T 09-03-2017 IPR023606 CoA-transferase family III domain NA29_RS12320 dedd06c34e983dda66abc5f4850843ae 476 Pfam PF02515 CoA-transferase family III 221 416 1.9E-48 T 09-03-2017 IPR003673 CoA-transferase family III GO:0003824 NA29_RS14995 24b8cd65b19605843eb1b7a4e74d6765 161 PIRSF PIRSF032131 1 158 4.1E-48 T 09-03-2017 IPR009562 Protein of unknown function DUF1178 NA29_RS14995 24b8cd65b19605843eb1b7a4e74d6765 161 Pfam PF06676 Protein of unknown function (DUF1178) 1 153 3.3E-55 T 09-03-2017 IPR009562 Protein of unknown function DUF1178 NA29_RS12800 c42691cfc5941516609ff13905804f02 458 Pfam PF16933 Putative exopolysaccharide Exporter (EPS-E) 1 453 2.1E-138 T 09-03-2017 IPR031617 Putative exopolysaccharide exporter NA29_RS12180 ef66de8e9d0f0222918ca9a69f5ca210 432 Gene3D G3DSA:1.20.1250.20 17 220 4.5E-47 T 09-03-2017 NA29_RS12180 ef66de8e9d0f0222918ca9a69f5ca210 432 SUPERFAMILY SSF103473 11 428 8.11E-87 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS12180 ef66de8e9d0f0222918ca9a69f5ca210 432 Gene3D G3DSA:1.20.1250.20 236 425 1.7E-19 T 09-03-2017 NA29_RS12180 ef66de8e9d0f0222918ca9a69f5ca210 432 Pfam PF07690 Major Facilitator Superfamily 28 377 4.8E-44 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS13635 0bc5b75a67b0361dc3310776f518da16 212 Gene3D G3DSA:1.10.357.10 6 201 4.3E-31 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS13635 0bc5b75a67b0361dc3310776f518da16 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 6.4E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS13635 0bc5b75a67b0361dc3310776f518da16 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 6.4E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS13635 0bc5b75a67b0361dc3310776f518da16 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 62 8.4E-14 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS13635 0bc5b75a67b0361dc3310776f518da16 212 SUPERFAMILY SSF46689 9 80 2.39E-17 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS06210 963332089a1a3023162f267addb464ec 305 SUPERFAMILY SSF103481 190 289 4.32E-12 T 09-03-2017 NA29_RS06210 963332089a1a3023162f267addb464ec 305 Pfam PF00892 EamA-like transporter family 151 283 3.0E-18 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS06210 963332089a1a3023162f267addb464ec 305 Pfam PF00892 EamA-like transporter family 7 136 1.6E-20 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS06210 963332089a1a3023162f267addb464ec 305 SUPERFAMILY SSF103481 36 140 1.16E-14 T 09-03-2017 NA29_RS14600 dc303258772a797cbf8a800a02958c5c 693 SUPERFAMILY SSF53850 448 657 2.35E-113 T 09-03-2017 NA29_RS14600 dc303258772a797cbf8a800a02958c5c 693 SUPERFAMILY SSF53850 103 420 2.35E-113 T 09-03-2017 NA29_RS14600 dc303258772a797cbf8a800a02958c5c 693 Gene3D G3DSA:3.10.105.10 384 421 1.0E-45 T 09-03-2017 NA29_RS14600 dc303258772a797cbf8a800a02958c5c 693 Gene3D G3DSA:3.10.105.10 455 623 1.0E-45 T 09-03-2017 NA29_RS14600 dc303258772a797cbf8a800a02958c5c 693 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 155 569 1.2E-78 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain NA29_RS14600 dc303258772a797cbf8a800a02958c5c 693 Gene3D G3DSA:3.40.190.10 216 383 1.7E-29 T 09-03-2017 NA29_RS14600 dc303258772a797cbf8a800a02958c5c 693 PIRSF PIRSF002741 57 656 4.5E-96 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 NA29_RS16690 b8c1649751480ab860e38a9cfd2c4467 131 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 5 80 3.0E-18 T 09-03-2017 IPR025161 Putative transposase IS4/IS5 family NA29_RS04175 04c9ae75162b0731c9048840884a12b2 343 SUPERFAMILY SSF51726 8 341 1.44E-66 T 09-03-2017 NA29_RS04175 04c9ae75162b0731c9048840884a12b2 343 PIRSF PIRSF005632 1 343 1.5E-200 T 09-03-2017 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit NA29_RS04175 04c9ae75162b0731c9048840884a12b2 343 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 6 330 2.3E-36 T 09-03-2017 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 NA29_RS04175 04c9ae75162b0731c9048840884a12b2 343 Gene3D G3DSA:3.20.20.210 3 341 1.9E-88 T 09-03-2017 NA29_RS12285 ad2d90304ef45c6f9d99f1dbc049add6 248 Pfam PF07007 Protein of unknown function (DUF1311) 49 137 7.5E-16 T 09-03-2017 IPR009739 Protein of unknown function DUF1311 NA29_RS14695 f426b45ac5c54421cd1f481a51de0e91 339 SUPERFAMILY SSF52540 81 297 7.17E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14695 f426b45ac5c54421cd1f481a51de0e91 339 SMART SM00382 105 281 6.5E-17 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS14695 f426b45ac5c54421cd1f481a51de0e91 339 Pfam PF00005 ABC transporter 96 231 4.6E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS14695 f426b45ac5c54421cd1f481a51de0e91 339 Gene3D G3DSA:3.40.50.300 76 283 1.9E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS14695 f426b45ac5c54421cd1f481a51de0e91 339 ProSitePatterns PS00211 ABC transporters family signature. 204 218 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS23600 cd8ff346ac6835405e64c2bf33acd0aa 274 SUPERFAMILY SSF51735 11 234 4.06E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS23600 cd8ff346ac6835405e64c2bf33acd0aa 274 Gene3D G3DSA:3.40.50.720 11 185 6.9E-31 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS23600 cd8ff346ac6835405e64c2bf33acd0aa 274 Pfam PF01370 NAD dependent epimerase/dehydratase family 13 170 1.2E-17 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NA29_RS05225 ed501e4a8fdd8903dededac458539aaa 440 Pfam PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region 17 139 5.6E-35 T 09-03-2017 IPR006862 Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase NA29_RS05225 ed501e4a8fdd8903dededac458539aaa 440 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 202 431 3.3E-57 T 09-03-2017 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal Reactome: R-HSA-75105 NA29_RS05225 ed501e4a8fdd8903dededac458539aaa 440 Gene3D G3DSA:3.40.50.1820 131 259 1.0E-22 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS05225 ed501e4a8fdd8903dededac458539aaa 440 Gene3D G3DSA:3.40.50.1820 325 428 1.0E-22 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS05225 ed501e4a8fdd8903dededac458539aaa 440 PIRSF PIRSF016521 1 438 3.4E-106 T 09-03-2017 IPR016662 Acyl-CoA thioesterase, long chain GO:0006637|GO:0016790 NA29_RS05225 ed501e4a8fdd8903dededac458539aaa 440 SUPERFAMILY SSF53474 416 428 7.16E-28 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS05225 ed501e4a8fdd8903dededac458539aaa 440 SUPERFAMILY SSF53474 66 257 7.16E-28 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS05225 ed501e4a8fdd8903dededac458539aaa 440 SUPERFAMILY SSF53474 290 387 7.16E-28 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS21035 db2f889a755a4d403f446e1ca9432202 165 SUPERFAMILY SSF55729 3 150 3.26E-37 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS21035 db2f889a755a4d403f446e1ca9432202 165 Pfam PF00583 Acetyltransferase (GNAT) family 56 137 4.2E-17 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS21035 db2f889a755a4d403f446e1ca9432202 165 Gene3D G3DSA:3.40.630.30 1 157 3.2E-57 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS00595 f4cf63110a42ffa0541fbade895e5155 153 Gene3D G3DSA:3.90.420.10 6 121 1.5E-8 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 NA29_RS00595 f4cf63110a42ffa0541fbade895e5155 153 Pfam PF00174 Oxidoreductase molybdopterin binding domain 6 146 3.3E-6 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 NA29_RS00595 f4cf63110a42ffa0541fbade895e5155 153 SUPERFAMILY SSF56524 6 121 1.07E-15 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 NA29_RS22125 1962c871d177d4759f85b35d48759590 210 Pfam PF06078 Bacterial protein of unknown function (DUF937) 54 186 3.2E-11 T 09-03-2017 IPR009282 Protein of unknown function DUF937 NA29_RS22125 1962c871d177d4759f85b35d48759590 210 SUPERFAMILY SSF140804 81 193 2.22E-27 T 09-03-2017 IPR027405 YidB-like NA29_RS22125 1962c871d177d4759f85b35d48759590 210 Gene3D G3DSA:1.10.10.690 78 201 1.8E-27 T 09-03-2017 IPR027405 YidB-like NA29_RS19445 c72ec69302cdb8338c6cf18c08439138 243 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 21 242 27.709 T 09-03-2017 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 NA29_RS19445 c72ec69302cdb8338c6cf18c08439138 243 SUPERFAMILY SSF52374 20 242 1.13E-40 T 09-03-2017 NA29_RS19445 c72ec69302cdb8338c6cf18c08439138 243 Pfam PF01467 Cytidylyltransferase-like 26 212 1.1E-19 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 NA29_RS19445 c72ec69302cdb8338c6cf18c08439138 243 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 25 241 3.1E-38 T 09-03-2017 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 NA29_RS19445 c72ec69302cdb8338c6cf18c08439138 243 Gene3D G3DSA:3.40.50.620 21 242 1.7E-60 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS25095 833156fdbae379d50613c35af05a79cc 88 SUPERFAMILY SSF81333 8 82 2.09E-18 T 09-03-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 NA29_RS25095 833156fdbae379d50613c35af05a79cc 88 ProSitePatterns PS00605 ATP synthase c subunit signature. 43 64 - T 09-03-2017 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210 NA29_RS25095 833156fdbae379d50613c35af05a79cc 88 Pfam PF00137 ATP synthase subunit C 14 76 3.4E-10 T 09-03-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 NA29_RS25095 833156fdbae379d50613c35af05a79cc 88 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 24 80 1.8E-20 T 09-03-2017 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 NA29_RS25095 833156fdbae379d50613c35af05a79cc 88 Hamap MF_01396 ATP synthase subunit c [atpH]. 12 80 13.863 T 09-03-2017 NA29_RS25095 833156fdbae379d50613c35af05a79cc 88 Gene3D G3DSA:1.20.20.10 7 82 1.5E-34 T 09-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 NA29_RS05500 240a2f89f8cf804841d7e174641d383a 310 Gene3D G3DSA:3.40.190.10 185 262 1.1E-16 T 09-03-2017 NA29_RS05500 240a2f89f8cf804841d7e174641d383a 310 Gene3D G3DSA:1.10.10.10 4 87 3.8E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05500 240a2f89f8cf804841d7e174641d383a 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 9.0E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS05500 240a2f89f8cf804841d7e174641d383a 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.4E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS05500 240a2f89f8cf804841d7e174641d383a 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.4E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS05500 240a2f89f8cf804841d7e174641d383a 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.4E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS05500 240a2f89f8cf804841d7e174641d383a 310 SUPERFAMILY SSF46785 2 86 2.56E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05500 240a2f89f8cf804841d7e174641d383a 310 Gene3D G3DSA:3.40.190.10 101 184 5.4E-19 T 09-03-2017 NA29_RS05500 240a2f89f8cf804841d7e174641d383a 310 SUPERFAMILY SSF53850 101 299 2.9E-31 T 09-03-2017 NA29_RS05500 240a2f89f8cf804841d7e174641d383a 310 Pfam PF03466 LysR substrate binding domain 101 295 4.2E-27 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS16185 e480fe409270133fd6e774af5dcb474f 240 Pfam PF10670 Domain of unknown function (DUF4198) 129 195 4.6E-10 T 09-03-2017 IPR019613 Protein of unknown function DUF4198 NA29_RS16185 e480fe409270133fd6e774af5dcb474f 240 SUPERFAMILY SSF49478 148 198 4.71E-5 T 09-03-2017 NA29_RS17270 e5b07c21148c6c3a663d8ef0e678c98e 263 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 18 220 6.5E-15 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 NA29_RS17270 e5b07c21148c6c3a663d8ef0e678c98e 263 Gene3D G3DSA:3.40.50.1000 15 82 1.9E-15 T 09-03-2017 IPR023214 HAD-like domain NA29_RS17270 e5b07c21148c6c3a663d8ef0e678c98e 263 Gene3D G3DSA:3.40.50.1000 164 222 1.9E-15 T 09-03-2017 IPR023214 HAD-like domain NA29_RS17270 e5b07c21148c6c3a663d8ef0e678c98e 263 Pfam PF08282 haloacid dehalogenase-like hydrolase 18 87 1.4E-4 T 09-03-2017 IPR023214 HAD-like domain NA29_RS17270 e5b07c21148c6c3a663d8ef0e678c98e 263 SUPERFAMILY SSF56784 15 252 7.28E-22 T 09-03-2017 IPR023214 HAD-like domain NA29_RS00870 e482b80145ab3842352c9ce9e0e0b0ce 403 Gene3D G3DSA:3.40.1690.10 206 345 8.4E-42 T 09-03-2017 IPR029025 Type III secretion system substrate exporter, C-terminal NA29_RS00870 e482b80145ab3842352c9ce9e0e0b0ce 403 SUPERFAMILY SSF160544 239 342 5.1E-26 T 09-03-2017 IPR029025 Type III secretion system substrate exporter, C-terminal NA29_RS00870 e482b80145ab3842352c9ce9e0e0b0ce 403 Pfam PF01312 FlhB HrpN YscU SpaS Family 2 334 2.1E-87 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS00870 e482b80145ab3842352c9ce9e0e0b0ce 403 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 5 27 1.1E-31 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS00870 e482b80145ab3842352c9ce9e0e0b0ce 403 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 216 233 1.1E-31 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS00870 e482b80145ab3842352c9ce9e0e0b0ce 403 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 260 275 1.1E-31 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS00870 e482b80145ab3842352c9ce9e0e0b0ce 403 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 290 311 1.1E-31 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS00870 e482b80145ab3842352c9ce9e0e0b0ce 403 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 196 214 1.1E-31 T 09-03-2017 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 NA29_RS00870 e482b80145ab3842352c9ce9e0e0b0ce 403 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 2 338 4.7E-112 T 09-03-2017 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 NA29_RS07730 7395f298fad2bec0d7aa3bc98121369e 157 SUPERFAMILY SSF51182 23 121 7.36E-13 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS07730 7395f298fad2bec0d7aa3bc98121369e 157 Gene3D G3DSA:2.60.120.10 34 126 6.3E-6 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS07730 7395f298fad2bec0d7aa3bc98121369e 157 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 7 131 6.8E-43 T 09-03-2017 IPR027565 Cupin fold metalloprotein, WbuC family NA29_RS15090 b3562b766b59c186f7e339e46c0a2c2d 255 Gene3D G3DSA:3.20.20.70 7 251 3.6E-96 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS15090 b3562b766b59c186f7e339e46c0a2c2d 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 8 242 8.0E-61 T 09-03-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS15090 b3562b766b59c186f7e339e46c0a2c2d 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 5 252 38.131 T 09-03-2017 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS15090 b3562b766b59c186f7e339e46c0a2c2d 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 169 179 - T 09-03-2017 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS15090 b3562b766b59c186f7e339e46c0a2c2d 255 Pfam PF00121 Triosephosphate isomerase 7 249 6.9E-84 T 09-03-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS15090 b3562b766b59c186f7e339e46c0a2c2d 255 SUPERFAMILY SSF51351 7 251 2.49E-84 T 09-03-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 NA29_RS20500 a158569bd7758a2a2259ee2d12b1e355 153 Gene3D G3DSA:3.30.70.920 63 140 2.8E-17 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS20500 a158569bd7758a2a2259ee2d12b1e355 153 SUPERFAMILY SSF46785 7 67 2.19E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20500 a158569bd7758a2a2259ee2d12b1e355 153 Gene3D G3DSA:1.10.10.10 5 60 1.1E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20500 a158569bd7758a2a2259ee2d12b1e355 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 7.3E-13 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS20500 a158569bd7758a2a2259ee2d12b1e355 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 7.3E-13 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS20500 a158569bd7758a2a2259ee2d12b1e355 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 7.3E-13 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS20500 a158569bd7758a2a2259ee2d12b1e355 153 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 2.9E-12 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 NA29_RS20500 a158569bd7758a2a2259ee2d12b1e355 153 SMART SM00344 8 114 5.2E-22 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 NA29_RS20500 a158569bd7758a2a2259ee2d12b1e355 153 SUPERFAMILY SSF54909 69 149 6.97E-16 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel NA29_RS20500 a158569bd7758a2a2259ee2d12b1e355 153 Pfam PF01037 Lrp/AsnC ligand binding domain 74 143 1.1E-14 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain NA29_RS22765 555ddecc63c028b7af28c5d24601a038 408 Pfam PF09594 Protein of unknown function (DUF2029) 110 332 1.1E-33 T 09-03-2017 IPR018584 Glycosyltransferase family 87 GO:0016758 NA29_RS03650 ac0108b8f2d971470b1fd5b535d8e327 277 SUPERFAMILY SSF51430 4 265 2.23E-75 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain NA29_RS03650 ac0108b8f2d971470b1fd5b535d8e327 277 Gene3D G3DSA:3.20.20.100 7 265 1.7E-71 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain NA29_RS03650 ac0108b8f2d971470b1fd5b535d8e327 277 PRINTS PR00069 Aldo-keto reductase signature 39 63 7.8E-10 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NA29_RS03650 ac0108b8f2d971470b1fd5b535d8e327 277 PRINTS PR00069 Aldo-keto reductase signature 95 113 7.8E-10 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NA29_RS03650 ac0108b8f2d971470b1fd5b535d8e327 277 PRINTS PR00069 Aldo-keto reductase signature 125 142 7.8E-10 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 NA29_RS03650 ac0108b8f2d971470b1fd5b535d8e327 277 Pfam PF00248 Aldo/keto reductase family 15 264 9.9E-53 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain NA29_RS17710 e4949b3ff2e658f4296adab57f3d1ce1 331 Pfam PF01032 FecCD transport family 17 327 6.6E-86 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 NA29_RS17710 e4949b3ff2e658f4296adab57f3d1ce1 331 Gene3D G3DSA:1.10.3470.10 4 328 1.1E-96 T 09-03-2017 IPR029022 ABC transporter, BtuC-like NA29_RS17710 e4949b3ff2e658f4296adab57f3d1ce1 331 SUPERFAMILY SSF81345 3 327 1.03E-73 T 09-03-2017 IPR029022 ABC transporter, BtuC-like NA29_RS06950 7beff31df8c9910d06dc639bcf38cf3b 319 Pfam PF03466 LysR substrate binding domain 87 291 1.8E-30 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS06950 7beff31df8c9910d06dc639bcf38cf3b 319 SUPERFAMILY SSF53850 91 295 1.02E-31 T 09-03-2017 NA29_RS06950 7beff31df8c9910d06dc639bcf38cf3b 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.5E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS06950 7beff31df8c9910d06dc639bcf38cf3b 319 Gene3D G3DSA:3.40.190.10 90 172 7.6E-21 T 09-03-2017 NA29_RS06950 7beff31df8c9910d06dc639bcf38cf3b 319 SUPERFAMILY SSF46785 1 111 5.12E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06950 7beff31df8c9910d06dc639bcf38cf3b 319 Gene3D G3DSA:1.10.10.10 1 86 1.5E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06950 7beff31df8c9910d06dc639bcf38cf3b 319 Gene3D G3DSA:3.40.190.10 173 256 2.8E-7 T 09-03-2017 NA29_RS13755 acddf99cc9c1d5840e708b10d3acf92d 152 SUPERFAMILY SSF75420 3 73 9.15E-18 T 09-03-2017 IPR028989 Ribosome maturation factor RimP, N-terminal NA29_RS13755 acddf99cc9c1d5840e708b10d3acf92d 152 Gene3D G3DSA:2.30.30.180 78 142 1.3E-14 T 09-03-2017 IPR028998 Ribosome maturation factor RimP, C-terminal NA29_RS13755 acddf99cc9c1d5840e708b10d3acf92d 152 Pfam PF02576 Putative ribosome maturation factor RimP 6 141 1.5E-38 T 09-03-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 NA29_RS13755 acddf99cc9c1d5840e708b10d3acf92d 152 Gene3D G3DSA:3.30.300.70 2 70 5.6E-20 T 09-03-2017 IPR028989 Ribosome maturation factor RimP, N-terminal NA29_RS13755 acddf99cc9c1d5840e708b10d3acf92d 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 145 23.266 T 09-03-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 NA29_RS13755 acddf99cc9c1d5840e708b10d3acf92d 152 SUPERFAMILY SSF74942 74 146 6.02E-16 T 09-03-2017 IPR028998 Ribosome maturation factor RimP, C-terminal NA29_RS24425 afb3790c36127adc6da15b0601f6b7ad 415 Pfam PF13579 Glycosyl transferase 4-like domain 22 183 1.5E-10 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 NA29_RS24425 afb3790c36127adc6da15b0601f6b7ad 415 SUPERFAMILY SSF53756 24 411 3.66E-34 T 09-03-2017 NA29_RS24425 afb3790c36127adc6da15b0601f6b7ad 415 Pfam PF13692 Glycosyl transferases group 1 235 373 7.1E-10 T 09-03-2017 NA29_RS24425 afb3790c36127adc6da15b0601f6b7ad 415 Gene3D G3DSA:3.40.50.2000 24 133 6.3E-4 T 09-03-2017 NA29_RS10505 371a00690c360b0c802cae9a4fb953cb 346 Pfam PF13177 DNA polymerase III, delta subunit 19 185 1.6E-39 T 09-03-2017 NA29_RS10505 371a00690c360b0c802cae9a4fb953cb 346 SUPERFAMILY SSF52540 5 226 1.13E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10505 371a00690c360b0c802cae9a4fb953cb 346 Gene3D G3DSA:3.40.50.300 5 175 2.5E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS10505 371a00690c360b0c802cae9a4fb953cb 346 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 17 221 1.0E-60 T 09-03-2017 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 NA29_RS10505 371a00690c360b0c802cae9a4fb953cb 346 Gene3D G3DSA:1.10.8.60 176 208 1.7E-4 T 09-03-2017 NA29_RS01690 e764fd7f31c57370013764b7b658234d 282 Pfam PF00892 EamA-like transporter family 151 280 1.4E-12 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS01690 e764fd7f31c57370013764b7b658234d 282 SUPERFAMILY SSF103481 47 141 2.88E-7 T 09-03-2017 NA29_RS01690 e764fd7f31c57370013764b7b658234d 282 SUPERFAMILY SSF103481 185 280 2.09E-11 T 09-03-2017 NA29_RS12705 27f979f7bb2aaebe0793fc11224cc7d5 445 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 33 47 - T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 NA29_RS12705 27f979f7bb2aaebe0793fc11224cc7d5 445 Pfam PF00209 Sodium:neurotransmitter symporter family 152 440 1.3E-27 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 NA29_RS12705 27f979f7bb2aaebe0793fc11224cc7d5 445 Pfam PF00209 Sodium:neurotransmitter symporter family 9 125 5.3E-22 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 NA29_RS12705 27f979f7bb2aaebe0793fc11224cc7d5 445 SUPERFAMILY SSF161070 9 445 1.31E-121 T 09-03-2017 NA29_RS12705 27f979f7bb2aaebe0793fc11224cc7d5 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 315 335 4.5E-13 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 NA29_RS12705 27f979f7bb2aaebe0793fc11224cc7d5 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 4.5E-13 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 NA29_RS12705 27f979f7bb2aaebe0793fc11224cc7d5 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 4.5E-13 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 NA29_RS12705 27f979f7bb2aaebe0793fc11224cc7d5 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 91 117 4.5E-13 T 09-03-2017 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 NA29_RS08040 24fa66e997f333892cff8650bdfa592c 118 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 28 106 3.1E-7 T 09-03-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 NA29_RS08040 24fa66e997f333892cff8650bdfa592c 118 SUPERFAMILY SSF51316 4 106 3.14E-26 T 09-03-2017 IPR011057 Mss4-like NA29_RS08040 24fa66e997f333892cff8650bdfa592c 118 Gene3D G3DSA:3.90.1590.10 3 104 3.2E-19 T 09-03-2017 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 NA29_RS12915 99704c2ecbca48d86b95ab3f8493e180 457 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 14 429 1.8E-120 T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 NA29_RS12915 99704c2ecbca48d86b95ab3f8493e180 457 TIGRFAM TIGR03173 pbuX: xanthine permease 23 432 7.8E-158 T 09-03-2017 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 NA29_RS12915 99704c2ecbca48d86b95ab3f8493e180 457 Pfam PF00860 Permease family 19 398 1.2E-107 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 NA29_RS12915 99704c2ecbca48d86b95ab3f8493e180 457 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 346 366 - T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 NA29_RS08830 16b7b7037ab2119d53a5da961ca4c7fc 249 Hamap MF_00943 Maleate isomerase [maiA]. 4 249 50.981 T 09-03-2017 IPR028615 Maleate isomerase GO:0050076 KEGG: 00650+5.2.1.1|KEGG: 00760+5.2.1.1|MetaCyc: PWY-5033|MetaCyc: PWY-6993|MetaCyc: PWY-7128|MetaCyc: PWY-722 NA29_RS08830 16b7b7037ab2119d53a5da961ca4c7fc 249 PIRSF PIRSF015736 1 249 1.3E-69 T 09-03-2017 IPR026286 Maleate isomerase/Arylmalonate decarboxylase NA29_RS20385 0b974369230e34c721937dafb84279f1 339 Pfam PF01513 ATP-NAD kinase 99 310 4.6E-53 T 09-03-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 NA29_RS20385 0b974369230e34c721937dafb84279f1 339 Gene3D G3DSA:2.60.200.30 190 300 4.9E-40 T 09-03-2017 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 NA29_RS20385 0b974369230e34c721937dafb84279f1 339 SUPERFAMILY SSF111331 46 330 1.96E-82 T 09-03-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain NA29_RS20385 0b974369230e34c721937dafb84279f1 339 Hamap MF_00361 NAD kinase [nadK]. 45 327 31.701 T 09-03-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 NA29_RS20385 0b974369230e34c721937dafb84279f1 339 Gene3D G3DSA:3.40.50.10330 42 189 1.2E-34 T 09-03-2017 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 NA29_RS15870 c11e8bdebf2fa8953b2180e0f3f8fede 486 Pfam PF01546 Peptidase family M20/M25/M40 105 482 2.7E-21 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 NA29_RS15870 c11e8bdebf2fa8953b2180e0f3f8fede 486 Gene3D G3DSA:3.40.630.10 24 229 3.5E-46 T 09-03-2017 NA29_RS15870 c11e8bdebf2fa8953b2180e0f3f8fede 486 Gene3D G3DSA:3.40.630.10 423 483 3.5E-46 T 09-03-2017 NA29_RS15870 c11e8bdebf2fa8953b2180e0f3f8fede 486 Pfam PF07687 Peptidase dimerisation domain 217 380 2.5E-12 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS15870 c11e8bdebf2fa8953b2180e0f3f8fede 486 SUPERFAMILY SSF53187 24 219 7.14E-47 T 09-03-2017 NA29_RS15870 c11e8bdebf2fa8953b2180e0f3f8fede 486 SUPERFAMILY SSF53187 399 482 7.14E-47 T 09-03-2017 NA29_RS15870 c11e8bdebf2fa8953b2180e0f3f8fede 486 Gene3D G3DSA:3.30.70.360 230 390 3.3E-30 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain NA29_RS22185 c8599f385c707e92313334c1e3e2efea 298 SUPERFAMILY SSF51197 80 222 7.69E-17 T 09-03-2017 NA29_RS22185 c8599f385c707e92313334c1e3e2efea 298 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 69 222 2.8E-46 T 09-03-2017 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 NA29_RS22185 c8599f385c707e92313334c1e3e2efea 298 Gene3D G3DSA:2.60.120.330 125 222 1.7E-14 T 09-03-2017 IPR027443 Isopenicillin N synthase-like NA29_RS22780 e43805112737667972da5eeaf62bf64e 792 Gene3D G3DSA:3.60.20.10 252 329 6.3E-91 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS22780 e43805112737667972da5eeaf62bf64e 792 Gene3D G3DSA:3.60.20.10 405 588 6.3E-91 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS22780 e43805112737667972da5eeaf62bf64e 792 PIRSF PIRSF001227 1 789 4.7E-209 T 09-03-2017 IPR014395 Penicillin acylase GO:0016811 NA29_RS22780 e43805112737667972da5eeaf62bf64e 792 Pfam PF01804 Penicillin amidase 26 777 2.4E-202 T 09-03-2017 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 NA29_RS22780 e43805112737667972da5eeaf62bf64e 792 Gene3D G3DSA:2.30.120.10 330 396 8.1E-28 T 09-03-2017 NA29_RS22780 e43805112737667972da5eeaf62bf64e 792 Gene3D G3DSA:1.10.439.10 14 178 3.5E-47 T 09-03-2017 IPR023343 Penicillin amidase type, domain1 GO:0016811 NA29_RS22780 e43805112737667972da5eeaf62bf64e 792 SUPERFAMILY SSF56235 22 210 1.52E-203 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS22780 e43805112737667972da5eeaf62bf64e 792 SUPERFAMILY SSF56235 245 789 1.52E-203 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS24775 5eebd045a9ef4345c2646b66bd826896 144 Pfam PF02561 Flagellar protein FliS 8 124 9.5E-39 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 NA29_RS24775 5eebd045a9ef4345c2646b66bd826896 144 SUPERFAMILY SSF101116 8 126 3.53E-39 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 NA29_RS24775 5eebd045a9ef4345c2646b66bd826896 144 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 124 1.0E-31 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 NA29_RS24775 5eebd045a9ef4345c2646b66bd826896 144 Gene3D G3DSA:1.20.120.340 8 128 7.0E-42 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 NA29_RS24775 5eebd045a9ef4345c2646b66bd826896 144 PIRSF PIRSF039090 1 133 3.9E-41 T 09-03-2017 IPR003713 Flagellar protein FliS GO:0044780 NA29_RS12135 14347baf9ba5172813e62fef382f0724 218 Pfam PF04972 BON domain 151 216 5.3E-15 T 09-03-2017 IPR007055 BON domain NA29_RS12135 14347baf9ba5172813e62fef382f0724 218 Pfam PF04972 BON domain 78 145 9.4E-16 T 09-03-2017 IPR007055 BON domain NA29_RS12135 14347baf9ba5172813e62fef382f0724 218 Pfam PF04972 BON domain 3 70 3.5E-15 T 09-03-2017 IPR007055 BON domain NA29_RS12135 14347baf9ba5172813e62fef382f0724 218 SMART SM00749 83 146 50.0 T 09-03-2017 IPR014004 Transport-associated and nodulation domain, bacteria NA29_RS12135 14347baf9ba5172813e62fef382f0724 218 SMART SM00749 8 71 0.13 T 09-03-2017 IPR014004 Transport-associated and nodulation domain, bacteria NA29_RS12135 14347baf9ba5172813e62fef382f0724 218 SMART SM00749 154 217 3.5E-4 T 09-03-2017 IPR014004 Transport-associated and nodulation domain, bacteria NA29_RS24845 9da11606d776c9000f59128e6718ebc9 332 SUPERFAMILY SSF101801 250 324 3.66E-15 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) NA29_RS24845 9da11606d776c9000f59128e6718ebc9 332 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 6 320 3.1E-110 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 NA29_RS24845 9da11606d776c9000f59128e6718ebc9 332 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 251 320 7.1E-20 T 09-03-2017 IPR001543 Surface presentation of antigen (SpoA) NA29_RS24845 9da11606d776c9000f59128e6718ebc9 332 Gene3D G3DSA:2.30.330.10 249 323 5.0E-10 T 09-03-2017 NA29_RS24845 9da11606d776c9000f59128e6718ebc9 332 SUPERFAMILY SSF103039 7 15 2.88E-22 T 09-03-2017 IPR028976 CheC-like domain NA29_RS24845 9da11606d776c9000f59128e6718ebc9 332 SUPERFAMILY SSF103039 55 230 2.88E-22 T 09-03-2017 IPR028976 CheC-like domain NA29_RS24845 9da11606d776c9000f59128e6718ebc9 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 6.0E-29 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 NA29_RS24845 9da11606d776c9000f59128e6718ebc9 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 4 17 6.0E-29 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 NA29_RS24845 9da11606d776c9000f59128e6718ebc9 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 6.0E-29 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 NA29_RS24845 9da11606d776c9000f59128e6718ebc9 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 6.0E-29 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 NA29_RS24845 9da11606d776c9000f59128e6718ebc9 332 Gene3D G3DSA:3.40.1550.10 68 231 8.0E-4 T 09-03-2017 IPR028976 CheC-like domain NA29_RS24845 9da11606d776c9000f59128e6718ebc9 332 PIRSF PIRSF002888 3 330 1.8E-98 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 NA29_RS24845 9da11606d776c9000f59128e6718ebc9 332 Pfam PF02154 Flagellar motor switch protein FliM 38 230 1.9E-74 T 09-03-2017 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 NA29_RS09075 d5f747274ef8355f18331085a321d1e5 190 Pfam PF08281 Sigma-70, region 4 128 175 1.8E-16 T 09-03-2017 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS09075 d5f747274ef8355f18331085a321d1e5 190 SUPERFAMILY SSF88946 14 83 1.29E-9 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS09075 d5f747274ef8355f18331085a321d1e5 190 Gene3D G3DSA:1.10.1740.10 4 77 1.2E-8 T 09-03-2017 NA29_RS09075 d5f747274ef8355f18331085a321d1e5 190 Gene3D G3DSA:1.10.10.10 122 184 2.1E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS09075 d5f747274ef8355f18331085a321d1e5 190 SUPERFAMILY SSF88659 120 184 4.49E-16 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS09075 d5f747274ef8355f18331085a321d1e5 190 Pfam PF04542 Sigma-70 region 2 18 75 1.2E-5 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS09075 d5f747274ef8355f18331085a321d1e5 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 183 4.4E-22 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 NA29_RS14700 9ddf2293dcf4641aebb6b37d4270a09d 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 270 4.6E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS14700 9ddf2293dcf4641aebb6b37d4270a09d 284 Gene3D G3DSA:1.10.3720.10 74 271 3.4E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS14700 9ddf2293dcf4641aebb6b37d4270a09d 284 SUPERFAMILY SSF161098 78 260 1.01E-33 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS22505 6815b0f1937e88dbd601ac4ae61c78cf 385 Gene3D G3DSA:2.40.160.10 21 385 1.7E-102 T 09-03-2017 IPR023614 Porin domain NA29_RS22505 6815b0f1937e88dbd601ac4ae61c78cf 385 PRINTS PR00184 Neisseria sp. porin signature 61 86 1.5E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS22505 6815b0f1937e88dbd601ac4ae61c78cf 385 PRINTS PR00184 Neisseria sp. porin signature 163 180 1.5E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS22505 6815b0f1937e88dbd601ac4ae61c78cf 385 PRINTS PR00184 Neisseria sp. porin signature 327 351 1.5E-11 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS22505 6815b0f1937e88dbd601ac4ae61c78cf 385 Pfam PF13609 Gram-negative porin 7 347 2.1E-51 T 09-03-2017 NA29_RS22505 6815b0f1937e88dbd601ac4ae61c78cf 385 SUPERFAMILY SSF56935 21 385 3.36E-87 T 09-03-2017 NA29_RS22505 6815b0f1937e88dbd601ac4ae61c78cf 385 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 330 347 1.5E-8 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS22505 6815b0f1937e88dbd601ac4ae61c78cf 385 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 103 113 1.5E-8 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS22505 6815b0f1937e88dbd601ac4ae61c78cf 385 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 164 175 1.5E-8 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS22505 6815b0f1937e88dbd601ac4ae61c78cf 385 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 59 70 1.5E-8 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS22505 6815b0f1937e88dbd601ac4ae61c78cf 385 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 198 210 1.5E-8 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS22325 30cd178cb175f93373c8f838fae2d295 191 Pfam PF08750 CNP1-like family 47 182 2.8E-45 T 09-03-2017 IPR014861 Uncharacterised domain CNP1 NA29_RS04920 a877c399b25cb34680ed5bcb0c89bfe7 245 Pfam PF01618 MotA/TolQ/ExbB proton channel family 98 207 2.6E-36 T 09-03-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 NA29_RS12445 ec432b6dace3d39d57453a9f127b8822 229 Pfam PF09865 Predicted periplasmic protein (DUF2092) 8 219 2.7E-71 T 09-03-2017 IPR019207 Protein of unknown function DUF2092, periplasmic NA29_RS12445 ec432b6dace3d39d57453a9f127b8822 229 SUPERFAMILY SSF89392 10 220 1.49E-16 T 09-03-2017 IPR029046 Lipoprotein localisation LolA/LolB/LppX NA29_RS12745 60643ba08c17fb230244c87b339f9f30 160 SUPERFAMILY SSF52833 7 152 1.57E-38 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS12745 60643ba08c17fb230244c87b339f9f30 160 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 12 150 4.9E-34 T 09-03-2017 NA29_RS12745 60643ba08c17fb230244c87b339f9f30 160 Gene3D G3DSA:3.40.30.10 74 151 1.4E-5 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS12745 60643ba08c17fb230244c87b339f9f30 160 PIRSF PIRSF000216 6 160 1.1E-33 T 09-03-2017 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS18210 dd3235e749371fbdf0632cfc54fe344b 337 SUPERFAMILY SSF53850 54 267 8.31E-34 T 09-03-2017 NA29_RS18210 dd3235e749371fbdf0632cfc54fe344b 337 Pfam PF09084 NMT1/THI5 like 53 264 1.8E-34 T 09-03-2017 IPR015168 SsuA/THI5-like NA29_RS18210 dd3235e749371fbdf0632cfc54fe344b 337 Gene3D G3DSA:3.40.190.10 127 249 3.7E-17 T 09-03-2017 NA29_RS02580 b1d6400bec4249341c06ec1c4e7e730e 201 Gene3D G3DSA:3.40.30.10 14 200 1.8E-58 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS02580 b1d6400bec4249341c06ec1c4e7e730e 201 Pfam PF02630 SCO1/SenC 39 179 1.9E-35 T 09-03-2017 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS02580 b1d6400bec4249341c06ec1c4e7e730e 201 SUPERFAMILY SSF52833 41 200 1.08E-50 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS21180 58a96d62b9b6d080aa1fc0ce903e8673 443 Pfam PF01554 MatE 250 411 9.1E-25 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 NA29_RS21180 58a96d62b9b6d080aa1fc0ce903e8673 443 Pfam PF01554 MatE 21 182 1.1E-28 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 NA29_RS21180 58a96d62b9b6d080aa1fc0ce903e8673 443 PIRSF PIRSF006603 1 443 1.6E-112 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 NA29_RS21180 58a96d62b9b6d080aa1fc0ce903e8673 443 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 423 3.8E-71 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 NA29_RS19330 846f068a6806d6fc6a4db161c6b3daa1 250 SUPERFAMILY SSF53474 5 248 1.88E-44 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS19330 846f068a6806d6fc6a4db161c6b3daa1 250 Pfam PF12697 Alpha/beta hydrolase family 15 241 1.6E-16 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS19330 846f068a6806d6fc6a4db161c6b3daa1 250 Gene3D G3DSA:3.40.50.1820 6 248 6.2E-44 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS19295 d956610178255eb3f6c0861c158953c0 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 2.0E-48 T 09-03-2017 IPR003791 Protein of unknown function UPF0178 NA29_RS19295 d956610178255eb3f6c0861c158953c0 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 31.796 T 09-03-2017 IPR003791 Protein of unknown function UPF0178 NA29_RS23055 9fcd1dea1356d820edc63b14b0f6a2d8 365 Gene3D G3DSA:3.40.630.10 9 130 1.5E-21 T 09-03-2017 NA29_RS23055 9fcd1dea1356d820edc63b14b0f6a2d8 365 Gene3D G3DSA:3.40.630.10 185 235 1.5E-21 T 09-03-2017 NA29_RS23055 9fcd1dea1356d820edc63b14b0f6a2d8 365 SUPERFAMILY SSF53187 195 296 3.59E-19 T 09-03-2017 NA29_RS23055 9fcd1dea1356d820edc63b14b0f6a2d8 365 SUPERFAMILY SSF53187 36 132 3.59E-19 T 09-03-2017 NA29_RS23055 9fcd1dea1356d820edc63b14b0f6a2d8 365 Pfam PF10994 Protein of unknown function (DUF2817) 6 345 1.4E-120 T 09-03-2017 IPR021259 Protein of unknown function DUF2817 NA29_RS04075 6d2425358fa5cf53ed2a8f264bc61fd6 266 SMART SM00382 41 238 1.8E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS04075 6d2425358fa5cf53ed2a8f264bc61fd6 266 SUPERFAMILY SSF52540 16 256 2.66E-76 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS04075 6d2425358fa5cf53ed2a8f264bc61fd6 266 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 NA29_RS04075 6d2425358fa5cf53ed2a8f264bc61fd6 266 Pfam PF00005 ABC transporter 32 190 6.0E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS04075 6d2425358fa5cf53ed2a8f264bc61fd6 266 PIRSF PIRSF039085 13 266 3.1E-107 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 NA29_RS04075 6d2425358fa5cf53ed2a8f264bc61fd6 266 Gene3D G3DSA:3.40.50.300 15 260 3.8E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS06760 5e8a3d9440082877a764208bae499f64 200 Pfam PF01169 Uncharacterized protein family UPF0016 22 95 6.6E-19 T 09-03-2017 IPR001727 Gdt1 family GO:0032472 NA29_RS06760 5e8a3d9440082877a764208bae499f64 200 Pfam PF01169 Uncharacterized protein family UPF0016 120 194 2.4E-24 T 09-03-2017 IPR001727 Gdt1 family GO:0032472 NA29_RS00880 404b14fc439f50ec50eb622ba1764282 583 Pfam PF04888 Secretion system effector C (SseC) like family 258 579 7.7E-58 T 09-03-2017 IPR006972 Secretion system effector C, SseC-like GO:0009405 NA29_RS00880 404b14fc439f50ec50eb622ba1764282 583 Pfam PF16535 Type III cell invasion protein SipB 84 232 1.2E-16 T 09-03-2017 IPR032391 Invasin IpaB, N-terminal NA29_RS00880 404b14fc439f50ec50eb622ba1764282 583 PRINTS PR01375 Salmonella/Shigella invasin protein B signature 299 318 2.9E-14 T 09-03-2017 IPR003895 Type III secretion system, invasin protein B GO:0005576|GO:0009405|GO:0016021 NA29_RS00880 404b14fc439f50ec50eb622ba1764282 583 PRINTS PR01375 Salmonella/Shigella invasin protein B signature 500 517 2.9E-14 T 09-03-2017 IPR003895 Type III secretion system, invasin protein B GO:0005576|GO:0009405|GO:0016021 NA29_RS00880 404b14fc439f50ec50eb622ba1764282 583 PRINTS PR01375 Salmonella/Shigella invasin protein B signature 266 286 2.9E-14 T 09-03-2017 IPR003895 Type III secretion system, invasin protein B GO:0005576|GO:0009405|GO:0016021 NA29_RS00880 404b14fc439f50ec50eb622ba1764282 583 PRINTS PR01375 Salmonella/Shigella invasin protein B signature 164 180 2.9E-14 T 09-03-2017 IPR003895 Type III secretion system, invasin protein B GO:0005576|GO:0009405|GO:0016021 NA29_RS00880 404b14fc439f50ec50eb622ba1764282 583 PRINTS PR01375 Salmonella/Shigella invasin protein B signature 453 473 2.9E-14 T 09-03-2017 IPR003895 Type III secretion system, invasin protein B GO:0005576|GO:0009405|GO:0016021 NA29_RS00880 404b14fc439f50ec50eb622ba1764282 583 PRINTS PR01375 Salmonella/Shigella invasin protein B signature 532 550 2.9E-14 T 09-03-2017 IPR003895 Type III secretion system, invasin protein B GO:0005576|GO:0009405|GO:0016021 NA29_RS13710 1f4879c77b679bf02da100cece38527a 102 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 10 98 4.4E-16 T 09-03-2017 IPR008407 Branched-chain amino acid transport, AzlD NA29_RS04600 d944088f83ace9740d1bbbbd28a79873 138 PIRSF PIRSF004638 1 138 1.5E-50 T 09-03-2017 IPR005265 Uncharacterised protein family UPF0093 NA29_RS04600 d944088f83ace9740d1bbbbd28a79873 138 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 138 3.8E-44 T 09-03-2017 IPR005265 Uncharacterised protein family UPF0093 NA29_RS15730 31cd993df3aafd27754122d03f0013eb 391 Pfam PF07995 Glucose / Sorbosone dehydrogenase 146 384 5.2E-14 T 09-03-2017 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 NA29_RS15730 31cd993df3aafd27754122d03f0013eb 391 SUPERFAMILY SSF50952 46 390 1.7E-35 T 09-03-2017 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 NA29_RS15730 31cd993df3aafd27754122d03f0013eb 391 Gene3D G3DSA:2.120.10.30 40 389 3.6E-68 T 09-03-2017 IPR011042 Six-bladed beta-propeller, TolB-like NA29_RS15155 0630a62adc401502c871d503078ee20a 400 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 178 1.5E-58 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 NA29_RS15155 0630a62adc401502c871d503078ee20a 400 Gene3D G3DSA:3.40.50.620 3 170 1.3E-88 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS15155 0630a62adc401502c871d503078ee20a 400 Gene3D G3DSA:3.40.50.620 241 274 1.3E-88 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS15155 0630a62adc401502c871d503078ee20a 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS15155 0630a62adc401502c871d503078ee20a 400 Pfam PF00579 tRNA synthetases class I (W and Y) 5 170 2.8E-49 T 09-03-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS15155 0630a62adc401502c871d503078ee20a 400 Pfam PF00579 tRNA synthetases class I (W and Y) 243 341 1.8E-9 T 09-03-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 NA29_RS15155 0630a62adc401502c871d503078ee20a 400 Gene3D G3DSA:1.10.240.10 275 365 2.8E-32 T 09-03-2017 NA29_RS15155 0630a62adc401502c871d503078ee20a 400 SUPERFAMILY SSF52374 3 172 1.88E-90 T 09-03-2017 NA29_RS15155 0630a62adc401502c871d503078ee20a 400 SUPERFAMILY SSF52374 243 397 1.88E-90 T 09-03-2017 NA29_RS15155 0630a62adc401502c871d503078ee20a 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.7E-22 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 NA29_RS15155 0630a62adc401502c871d503078ee20a 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 1.7E-22 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 NA29_RS15155 0630a62adc401502c871d503078ee20a 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 1.7E-22 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 NA29_RS15155 0630a62adc401502c871d503078ee20a 400 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 398 34.739 T 09-03-2017 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 NA29_RS13485 bfca22a8beb30e0dd0d8b97b18e906bf 419 Gene3D G3DSA:3.40.640.10 61 292 3.4E-70 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS13485 bfca22a8beb30e0dd0d8b97b18e906bf 419 Gene3D G3DSA:3.90.1150.10 293 415 1.6E-41 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS13485 bfca22a8beb30e0dd0d8b97b18e906bf 419 Pfam PF00155 Aminotransferase class I and II 46 406 5.5E-51 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS13485 bfca22a8beb30e0dd0d8b97b18e906bf 419 SUPERFAMILY SSF53383 15 411 1.33E-99 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS21755 298522b5b5ff1a65df8c02f8ae192903 256 Pfam PF03741 Integral membrane protein TerC family 18 212 4.3E-47 T 09-03-2017 IPR005496 Integral membrane protein TerC GO:0016021 NA29_RS24890 caf7c4f0e7d62ec50143a356145f7844 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 3.8E-75 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NA29_RS24890 caf7c4f0e7d62ec50143a356145f7844 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 3.8E-75 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NA29_RS24890 caf7c4f0e7d62ec50143a356145f7844 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 3.8E-75 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NA29_RS24890 caf7c4f0e7d62ec50143a356145f7844 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 3.8E-75 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NA29_RS24890 caf7c4f0e7d62ec50143a356145f7844 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 3.8E-75 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NA29_RS24890 caf7c4f0e7d62ec50143a356145f7844 363 PRINTS PR01010 Flagellar P-ring protein signature 19 34 3.8E-75 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NA29_RS24890 caf7c4f0e7d62ec50143a356145f7844 363 PRINTS PR01010 Flagellar P-ring protein signature 34 49 3.8E-75 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NA29_RS24890 caf7c4f0e7d62ec50143a356145f7844 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 3.8E-75 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NA29_RS24890 caf7c4f0e7d62ec50143a356145f7844 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 1 363 37.837 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NA29_RS24890 caf7c4f0e7d62ec50143a356145f7844 363 Pfam PF02119 Flagellar P-ring protein 19 362 5.3E-141 T 09-03-2017 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 NA29_RS24600 9c5c558d2c4ca95757e43d92e709ebe2 275 Gene3D G3DSA:3.40.190.10 236 274 2.5E-30 T 09-03-2017 NA29_RS24600 9c5c558d2c4ca95757e43d92e709ebe2 275 Gene3D G3DSA:3.40.190.10 50 139 2.5E-30 T 09-03-2017 NA29_RS24600 9c5c558d2c4ca95757e43d92e709ebe2 275 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 76 89 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 NA29_RS24600 9c5c558d2c4ca95757e43d92e709ebe2 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 57 274 3.0E-38 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS24600 9c5c558d2c4ca95757e43d92e709ebe2 275 SUPERFAMILY SSF53850 43 274 1.79E-51 T 09-03-2017 NA29_RS24600 9c5c558d2c4ca95757e43d92e709ebe2 275 Gene3D G3DSA:3.40.190.10 149 214 1.0E-6 T 09-03-2017 NA29_RS24600 9c5c558d2c4ca95757e43d92e709ebe2 275 SMART SM00062 53 275 3.6E-41 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS19505 14671a4ec5a48e2fccb1c7a3b064cbdf 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 177 2.0E-68 T 09-03-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NA29_RS19505 14671a4ec5a48e2fccb1c7a3b064cbdf 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 177 5.0E-80 T 09-03-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NA29_RS19505 14671a4ec5a48e2fccb1c7a3b064cbdf 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 176 1.5E-72 T 09-03-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 NA29_RS19505 14671a4ec5a48e2fccb1c7a3b064cbdf 182 Gene3D G3DSA:2.60.120.10 1 179 3.7E-81 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS19505 14671a4ec5a48e2fccb1c7a3b064cbdf 182 SUPERFAMILY SSF51182 1 178 1.07E-76 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS20070 b51c5dfefcf9e3be6eaa3523f85057f9 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 4.6E-35 T 09-03-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20070 b51c5dfefcf9e3be6eaa3523f85057f9 192 Gene3D G3DSA:1.10.287.990 20 82 1.6E-26 T 09-03-2017 NA29_RS20070 b51c5dfefcf9e3be6eaa3523f85057f9 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 2.4E-40 T 09-03-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20070 b51c5dfefcf9e3be6eaa3523f85057f9 192 PIRSF PIRSF000349 1 192 2.3E-86 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20070 b51c5dfefcf9e3be6eaa3523f85057f9 192 SUPERFAMILY SSF54719 81 191 8.12E-44 T 09-03-2017 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20070 b51c5dfefcf9e3be6eaa3523f85057f9 192 SUPERFAMILY SSF46609 1 84 1.83E-36 T 09-03-2017 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20070 b51c5dfefcf9e3be6eaa3523f85057f9 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 09-03-2017 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20070 b51c5dfefcf9e3be6eaa3523f85057f9 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 6.2E-23 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20070 b51c5dfefcf9e3be6eaa3523f85057f9 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 6.2E-23 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20070 b51c5dfefcf9e3be6eaa3523f85057f9 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 6.2E-23 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20070 b51c5dfefcf9e3be6eaa3523f85057f9 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 6.2E-23 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS20070 b51c5dfefcf9e3be6eaa3523f85057f9 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 6.2E-23 T 09-03-2017 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 NA29_RS00235 82690c37879f99897f1f3881e46b0a2a 433 SUPERFAMILY SSF51905 6 359 8.03E-29 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS00235 82690c37879f99897f1f3881e46b0a2a 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 9.3E-13 T 09-03-2017 NA29_RS00235 82690c37879f99897f1f3881e46b0a2a 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 9.3E-13 T 09-03-2017 NA29_RS00235 82690c37879f99897f1f3881e46b0a2a 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 132 9.3E-13 T 09-03-2017 NA29_RS00235 82690c37879f99897f1f3881e46b0a2a 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 9.3E-13 T 09-03-2017 NA29_RS00235 82690c37879f99897f1f3881e46b0a2a 433 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 337 5.1E-49 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS00235 82690c37879f99897f1f3881e46b0a2a 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 2.4E-6 T 09-03-2017 NA29_RS00235 82690c37879f99897f1f3881e46b0a2a 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 2.4E-6 T 09-03-2017 NA29_RS00235 82690c37879f99897f1f3881e46b0a2a 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 416 431 2.4E-6 T 09-03-2017 NA29_RS00235 82690c37879f99897f1f3881e46b0a2a 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.4E-6 T 09-03-2017 NA29_RS00235 82690c37879f99897f1f3881e46b0a2a 433 Gene3D G3DSA:3.50.50.60 118 344 1.3E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS00235 82690c37879f99897f1f3881e46b0a2a 433 Gene3D G3DSA:3.50.50.60 3 117 1.7E-18 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 NA29_RS14785 818ed511969dcf9d096629c9d72568c9 224 SUPERFAMILY SSF51366 11 218 1.24E-56 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 NA29_RS14785 818ed511969dcf9d096629c9d72568c9 224 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 11 221 39.798 T 09-03-2017 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 NA29_RS14785 818ed511969dcf9d096629c9d72568c9 224 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 13 217 3.8E-43 T 09-03-2017 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 NA29_RS14785 818ed511969dcf9d096629c9d72568c9 224 Gene3D G3DSA:3.20.20.70 10 218 3.1E-66 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS13795 381f23a5e138ee7fc242e2c99d7d622e 308 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 8 219 1.4E-28 T 09-03-2017 NA29_RS07705 520674232c13dec66c22e5c922cf330c 149 Gene3D G3DSA:3.40.630.30 1 135 3.2E-26 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS07705 520674232c13dec66c22e5c922cf330c 149 SUPERFAMILY SSF55729 1 137 3.88E-23 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS07705 520674232c13dec66c22e5c922cf330c 149 Pfam PF13508 Acetyltransferase (GNAT) domain 54 129 6.6E-10 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS03060 c7ab34eb2b17a832138f9b7c918fb79b 418 SUPERFAMILY SSF56349 196 362 1.74E-19 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 NA29_RS03060 c7ab34eb2b17a832138f9b7c918fb79b 418 Gene3D G3DSA:1.10.443.10 196 395 4.6E-23 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS03060 c7ab34eb2b17a832138f9b7c918fb79b 418 Pfam PF00589 Phage integrase family 225 357 1.8E-9 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 NA29_RS16070 cbd4d2eabe71ccd58f915a5a7538ba2c 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 266 4.4E-16 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16070 cbd4d2eabe71ccd58f915a5a7538ba2c 275 Gene3D G3DSA:1.10.3720.10 4 264 7.1E-52 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16070 cbd4d2eabe71ccd58f915a5a7538ba2c 275 SUPERFAMILY SSF161098 8 270 2.9E-59 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS24480 1273b19e0b5d582a7de0d84e441b9d73 155 Pfam PF13501 Sulfur oxidation protein SoxY 52 153 2.7E-33 T 09-03-2017 IPR032711 Ig-like SoxY domain NA29_RS24480 1273b19e0b5d582a7de0d84e441b9d73 155 PIRSF PIRSF010312 1 155 8.8E-46 T 09-03-2017 IPR016568 Sulphur oxidation, SoxY NA29_RS24480 1273b19e0b5d582a7de0d84e441b9d73 155 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 4 155 2.6E-50 T 09-03-2017 IPR016568 Sulphur oxidation, SoxY NA29_RS18420 2277f5c832ae41cd2126e5ef11d00205 69 Pfam PF01361 Tautomerase enzyme 2 55 9.6E-11 T 09-03-2017 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 NA29_RS18420 2277f5c832ae41cd2126e5ef11d00205 69 Gene3D G3DSA:3.30.429.20 1 60 3.0E-20 T 09-03-2017 NA29_RS18420 2277f5c832ae41cd2126e5ef11d00205 69 SUPERFAMILY SSF55331 2 60 8.12E-14 T 09-03-2017 IPR014347 Tautomerase/MIF superfamily NA29_RS11975 11df47943b080e8d00f994f2dcfa9fbd 167 Pfam PF00582 Universal stress protein family 1 148 2.5E-30 T 09-03-2017 IPR006016 UspA GO:0006950 NA29_RS11975 11df47943b080e8d00f994f2dcfa9fbd 167 PRINTS PR01438 Universal stress protein signature 2 20 1.5E-17 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS11975 11df47943b080e8d00f994f2dcfa9fbd 167 PRINTS PR01438 Universal stress protein signature 126 148 1.5E-17 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS11975 11df47943b080e8d00f994f2dcfa9fbd 167 PRINTS PR01438 Universal stress protein signature 108 120 1.5E-17 T 09-03-2017 IPR006015 Universal stress protein A NA29_RS11975 11df47943b080e8d00f994f2dcfa9fbd 167 SUPERFAMILY SSF52402 1 149 8.37E-35 T 09-03-2017 NA29_RS11975 11df47943b080e8d00f994f2dcfa9fbd 167 Gene3D G3DSA:3.40.50.620 2 149 1.6E-37 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS06730 d685187e07003b679ea135c3f3563879 472 Pfam PF00083 Sugar (and other) transporter 82 471 2.2E-34 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS06730 d685187e07003b679ea135c3f3563879 472 Gene3D G3DSA:1.20.1250.20 283 467 5.7E-20 T 09-03-2017 NA29_RS06730 d685187e07003b679ea135c3f3563879 472 ProSitePatterns PS00217 Sugar transport proteins signature 2. 142 167 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS06730 d685187e07003b679ea135c3f3563879 472 Gene3D G3DSA:1.20.1250.20 36 232 6.7E-20 T 09-03-2017 NA29_RS06730 d685187e07003b679ea135c3f3563879 472 SUPERFAMILY SSF103473 21 470 7.59E-69 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS11160 d817401232e975e22c39255cae4112d2 237 SUPERFAMILY SSF51182 125 199 5.09E-6 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS11160 d817401232e975e22c39255cae4112d2 237 Gene3D G3DSA:2.60.120.10 128 197 1.6E-4 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS10580 b6f21759402e0e8799a7db58afbb1e66 250 SUPERFAMILY SSF161098 14 229 3.27E-43 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS10580 b6f21759402e0e8799a7db58afbb1e66 250 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 63 243 1.2E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS10580 b6f21759402e0e8799a7db58afbb1e66 250 Gene3D G3DSA:1.10.3720.10 13 243 1.7E-51 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS09645 bbd15eb88541e6c58fe72cef00aefedb 82 Gene3D G3DSA:1.10.3150.10 25 82 9.3E-4 T 09-03-2017 IPR013976 Metal-dependent hydrolase HDOD NA29_RS24505 95a42984e1f24f3c53feecfd5d2a4b2d 560 Pfam PF08479 POTRA domain, ShlB-type 69 142 2.5E-18 T 09-03-2017 IPR013686 Polypeptide-transport-associated, ShlB-type NA29_RS24505 95a42984e1f24f3c53feecfd5d2a4b2d 560 Gene3D G3DSA:3.10.20.310 70 142 8.2E-9 T 09-03-2017 NA29_RS24505 95a42984e1f24f3c53feecfd5d2a4b2d 560 Gene3D G3DSA:2.40.160.50 178 559 1.3E-57 T 09-03-2017 NA29_RS05660 de8a45048aad729c6fc9820fcda85194 208 Pfam PF01292 Prokaryotic cytochrome b561 19 207 5.5E-26 T 09-03-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 NA29_RS05660 de8a45048aad729c6fc9820fcda85194 208 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 173 195 8.6E-5 T 09-03-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 NA29_RS05660 de8a45048aad729c6fc9820fcda85194 208 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 21 44 8.6E-5 T 09-03-2017 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 NA29_RS05660 de8a45048aad729c6fc9820fcda85194 208 Gene3D G3DSA:1.20.950.20 19 208 7.9E-45 T 09-03-2017 NA29_RS05660 de8a45048aad729c6fc9820fcda85194 208 SUPERFAMILY SSF81342 14 208 4.47E-35 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 NA29_RS00375 69ac4b67745b1d70f25658a934720071 428 Pfam PF04286 Protein of unknown function (DUF445) 47 419 1.1E-90 T 09-03-2017 IPR007383 Protein of unknown function DUF445 NA29_RS15515 1cbed773c8d155926636dae2782eaa9f 314 SUPERFAMILY SSF53955 105 242 4.69E-42 T 09-03-2017 IPR023346 Lysozyme-like domain NA29_RS15515 1cbed773c8d155926636dae2782eaa9f 314 Pfam PF01464 Transglycosylase SLT domain 114 219 5.1E-28 T 09-03-2017 IPR008258 Transglycosylase SLT domain 1 NA29_RS15515 1cbed773c8d155926636dae2782eaa9f 314 Gene3D G3DSA:1.10.530.10 108 242 5.7E-44 T 09-03-2017 NA29_RS22280 4fa21decf02b4b4542c13f99ae8671f1 199 SMART SM00644 26 174 1.4E-51 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NA29_RS22280 4fa21decf02b4b4542c13f99ae8671f1 199 Gene3D G3DSA:3.40.80.10 14 185 8.4E-65 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NA29_RS22280 4fa21decf02b4b4542c13f99ae8671f1 199 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 65 175 1.4E-17 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NA29_RS22280 4fa21decf02b4b4542c13f99ae8671f1 199 SUPERFAMILY SSF55846 13 186 9.29E-63 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 NA29_RS00705 22a245ec78e92e8cf2938148b6d732e9 429 Pfam PF02481 DNA recombination-mediator protein A 78 289 1.5E-72 T 09-03-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 NA29_RS00705 22a245ec78e92e8cf2938148b6d732e9 429 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 74 298 6.7E-70 T 09-03-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 NA29_RS00705 22a245ec78e92e8cf2938148b6d732e9 429 Gene3D G3DSA:3.40.50.450 124 298 3.1E-12 T 09-03-2017 NA29_RS00705 22a245ec78e92e8cf2938148b6d732e9 429 SUPERFAMILY SSF102405 86 298 4.88E-41 T 09-03-2017 NA29_RS04905 1b3eb9a69e00d7d45ed0af20ec318c78 136 Pfam PF02566 OsmC-like protein 37 131 2.5E-18 T 09-03-2017 IPR003718 OsmC/Ohr family NA29_RS04905 1b3eb9a69e00d7d45ed0af20ec318c78 136 SUPERFAMILY SSF82784 12 134 2.22E-35 T 09-03-2017 IPR003718 OsmC/Ohr family NA29_RS04905 1b3eb9a69e00d7d45ed0af20ec318c78 136 Gene3D G3DSA:3.30.300.20 13 135 8.0E-43 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta NA29_RS20085 bd1faed19ccf34045ca8107118323f65 153 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 140 5.7E-29 T 09-03-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 NA29_RS01520 f2de50c8855cde4cd98fe1305cfb00ff 303 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 272 7.1E-45 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS01520 f2de50c8855cde4cd98fe1305cfb00ff 303 SUPERFAMILY SSF53850 14 274 3.7E-59 T 09-03-2017 NA29_RS01520 f2de50c8855cde4cd98fe1305cfb00ff 303 Gene3D G3DSA:3.40.190.10 235 276 5.8E-28 T 09-03-2017 NA29_RS01520 f2de50c8855cde4cd98fe1305cfb00ff 303 Gene3D G3DSA:3.40.190.10 40 127 5.8E-28 T 09-03-2017 NA29_RS01520 f2de50c8855cde4cd98fe1305cfb00ff 303 Gene3D G3DSA:3.40.190.10 128 234 1.0E-27 T 09-03-2017 NA29_RS01520 f2de50c8855cde4cd98fe1305cfb00ff 303 SMART SM00062 42 274 4.1E-52 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS23630 02978d6eb04f44d1bb66184537773919 249 Gene3D G3DSA:2.40.160.20 23 249 1.5E-61 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NA29_RS23630 02978d6eb04f44d1bb66184537773919 249 SUPERFAMILY SSF56925 24 44 4.45E-18 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NA29_RS23630 02978d6eb04f44d1bb66184537773919 249 SUPERFAMILY SSF56925 71 249 4.45E-18 T 09-03-2017 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 NA29_RS23630 02978d6eb04f44d1bb66184537773919 249 Pfam PF03922 OmpW family 66 249 3.2E-27 T 09-03-2017 IPR005618 Outer membrane protein, OmpW GO:0019867 NA29_RS24235 80a861c89038d7301710b4ea8117d4aa 285 SMART SM00530 30 102 1.2E-4 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS24235 80a861c89038d7301710b4ea8117d4aa 285 SUPERFAMILY SSF47413 26 101 8.04E-5 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS24235 80a861c89038d7301710b4ea8117d4aa 285 Gene3D G3DSA:1.10.260.40 19 100 2.3E-14 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS24235 80a861c89038d7301710b4ea8117d4aa 285 Pfam PF13560 Helix-turn-helix domain 26 105 6.6E-18 T 09-03-2017 NA29_RS12295 885e546da812a1693bfb8387d4c21886 260 SUPERFAMILY SSF53474 33 256 8.32E-30 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS12295 885e546da812a1693bfb8387d4c21886 260 Pfam PF12697 Alpha/beta hydrolase family 38 250 2.1E-18 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS12295 885e546da812a1693bfb8387d4c21886 260 Gene3D G3DSA:3.40.50.1820 36 258 3.5E-34 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS24285 34d01ab3396dd71a5472062b49e957a0 401 Gene3D G3DSA:3.40.710.10 113 353 1.3E-34 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS24285 34d01ab3396dd71a5472062b49e957a0 401 Pfam PF00144 Beta-lactamase 114 332 8.5E-28 T 09-03-2017 IPR001466 Beta-lactamase-related NA29_RS24285 34d01ab3396dd71a5472062b49e957a0 401 SUPERFAMILY SSF56601 88 356 4.47E-40 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like NA29_RS16615 4ac6c3dff6461d676a620ef17c595312 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 1.6E-43 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16615 4ac6c3dff6461d676a620ef17c595312 306 Gene3D G3DSA:1.10.3720.10 86 300 2.9E-24 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16615 4ac6c3dff6461d676a620ef17c595312 306 SUPERFAMILY SSF161098 91 288 1.44E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS06615 c88fdd9c751d9a3d2a7493a31e2580de 290 Gene3D G3DSA:3.40.50.1820 33 278 6.3E-49 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS06615 c88fdd9c751d9a3d2a7493a31e2580de 290 Pfam PF07859 alpha/beta hydrolase fold 73 261 1.1E-15 T 09-03-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 NA29_RS06615 c88fdd9c751d9a3d2a7493a31e2580de 290 SUPERFAMILY SSF53474 12 267 1.3E-47 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS05400 f2e4e0f77748ca23214c5d00c9409705 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 259 266 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS05400 f2e4e0f77748ca23214c5d00c9409705 490 Gene3D G3DSA:3.40.309.10 274 459 1.2E-69 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS05400 f2e4e0f77748ca23214c5d00c9409705 490 SUPERFAMILY SSF53720 10 486 5.76E-167 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS05400 f2e4e0f77748ca23214c5d00c9409705 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 287 298 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS05400 f2e4e0f77748ca23214c5d00c9409705 490 Pfam PF00171 Aldehyde dehydrogenase family 21 484 1.3E-164 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS05400 f2e4e0f77748ca23214c5d00c9409705 490 Gene3D G3DSA:3.40.605.10 11 273 2.2E-96 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS12930 81f530841d094511d13025146cd5323a 456 Pfam PF01554 MatE 30 193 2.4E-22 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 NA29_RS11580 61b94c1c1fcb4461559da06149be65af 301 Pfam PF00756 Putative esterase 43 289 1.9E-32 T 09-03-2017 IPR000801 Putative esterase Reactome: R-HSA-156590 NA29_RS11580 61b94c1c1fcb4461559da06149be65af 301 Gene3D G3DSA:3.40.50.1820 34 297 3.6E-66 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS11580 61b94c1c1fcb4461559da06149be65af 301 SUPERFAMILY SSF53474 34 191 2.08E-50 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS11580 61b94c1c1fcb4461559da06149be65af 301 SUPERFAMILY SSF53474 219 292 2.08E-50 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS22455 5325380c4c2dcf5324d9645278da035d 422 Pfam PF01098 Cell cycle protein 52 414 6.2E-105 T 09-03-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 NA29_RS22455 5325380c4c2dcf5324d9645278da035d 422 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 50 412 2.1E-122 T 09-03-2017 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 NA29_RS22455 5325380c4c2dcf5324d9645278da035d 422 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 48 421 39.759 T 09-03-2017 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 NA29_RS16895 8e4a68630fc2e69ae844b59c59bea2ed 216 Gene3D G3DSA:1.10.10.640 77 118 5.7E-22 T 09-03-2017 IPR023094 Toluene tolerance protein, alpha-helical NA29_RS16895 8e4a68630fc2e69ae844b59c59bea2ed 216 Gene3D G3DSA:1.10.10.640 182 213 5.7E-22 T 09-03-2017 IPR023094 Toluene tolerance protein, alpha-helical NA29_RS16895 8e4a68630fc2e69ae844b59c59bea2ed 216 Gene3D G3DSA:3.10.450.50 123 175 4.4E-24 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS16895 8e4a68630fc2e69ae844b59c59bea2ed 216 Gene3D G3DSA:3.10.450.50 32 76 4.4E-24 T 09-03-2017 IPR032710 NTF2-like domain NA29_RS16895 8e4a68630fc2e69ae844b59c59bea2ed 216 Pfam PF05494 MlaC protein 39 209 7.2E-41 T 09-03-2017 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC NA29_RS02495 53aafb00609a9dd9e2d03abe29b07d4c 320 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 47 265 2.5E-25 T 09-03-2017 IPR025859 P-aminobenzoate N-oxygenase AurF NA29_RS12780 72bdf1b2c2afe3425b61075586733579 526 Pfam PF03929 PepSY-associated TM region 11 364 4.2E-53 T 09-03-2017 IPR005625 PepSY-associated TM protein NA29_RS15655 f2faf59aa18d36b39c0d08cefde6afd2 291 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 263 2.2E-39 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS19340 93451f33ab16b063d4292966c4093e19 178 Gene3D G3DSA:3.30.1330.80 30 172 2.6E-10 T 09-03-2017 NA29_RS19340 93451f33ab16b063d4292966c4093e19 178 SUPERFAMILY SSF117856 29 170 1.78E-9 T 09-03-2017 NA29_RS17120 df63864852c77ad438cd948716ec1038 332 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 17 314 4.0E-95 T 09-03-2017 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 NA29_RS17120 df63864852c77ad438cd948716ec1038 332 Pfam PF03812 2-keto-3-deoxygluconate permease 6 314 2.7E-116 T 09-03-2017 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 NA29_RS06265 2ef388377a8c23bbf56a98af7db179f8 175 Gene3D G3DSA:3.40.630.30 6 172 2.9E-36 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS06265 2ef388377a8c23bbf56a98af7db179f8 175 SUPERFAMILY SSF55729 7 172 4.79E-35 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase NA29_RS06265 2ef388377a8c23bbf56a98af7db179f8 175 Pfam PF13673 Acetyltransferase (GNAT) domain 48 152 4.2E-17 T 09-03-2017 IPR000182 GNAT domain GO:0008080 NA29_RS22240 7d45c0ba7943a7cfc1a94b4451d280f7 365 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 9 44 5.6E-15 T 09-03-2017 IPR011723 Zinc finger/thioredoxin putative NA29_RS22240 7d45c0ba7943a7cfc1a94b4451d280f7 365 Pfam PF13719 zinc-ribbon domain 8 43 2.0E-14 T 09-03-2017 IPR011723 Zinc finger/thioredoxin putative NA29_RS22240 7d45c0ba7943a7cfc1a94b4451d280f7 365 Pfam PF11906 Protein of unknown function (DUF3426) 182 361 1.2E-30 T 09-03-2017 IPR021834 Protein of unknown function DUF3426 NA29_RS07490 18c227c18bcc47be88267839d6028ebf 154 SUPERFAMILY SSF55781 35 143 1.31E-5 T 09-03-2017 IPR029016 GAF domain-like NA29_RS23450 a9d2f1f521ff3edfdaf0c7cdae3c59a6 118 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 95 21.697 T 09-03-2017 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 NA29_RS23450 a9d2f1f521ff3edfdaf0c7cdae3c59a6 118 SUPERFAMILY SSF101386 4 100 2.99E-24 T 09-03-2017 NA29_RS23450 a9d2f1f521ff3edfdaf0c7cdae3c59a6 118 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 6 98 2.7E-15 T 09-03-2017 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 NA29_RS23450 a9d2f1f521ff3edfdaf0c7cdae3c59a6 118 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 95 1.7E-30 T 09-03-2017 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 NA29_RS25330 275b9aab7c0453b5698a5cd6c9ac98a4 401 Pfam PF00999 Sodium/hydrogen exchanger family 22 357 1.3E-26 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 NA29_RS05390 c74a8b50a345d298617669ecfa1598e0 252 Gene3D G3DSA:3.40.50.10320 45 242 9.7E-39 T 09-03-2017 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 NA29_RS05390 c74a8b50a345d298617669ecfa1598e0 252 Pfam PF02585 GlcNAc-PI de-N-acetylase 45 168 2.2E-24 T 09-03-2017 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 NA29_RS05390 c74a8b50a345d298617669ecfa1598e0 252 SUPERFAMILY SSF102588 45 250 6.8E-42 T 09-03-2017 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 NA29_RS11475 390b7e5c99090f35d7b87d55797aba5a 347 Pfam PF13343 Bacterial extracellular solute-binding protein 98 310 6.2E-33 T 09-03-2017 NA29_RS11475 390b7e5c99090f35d7b87d55797aba5a 347 Gene3D G3DSA:3.40.190.10 137 276 4.1E-27 T 09-03-2017 NA29_RS11475 390b7e5c99090f35d7b87d55797aba5a 347 Gene3D G3DSA:3.40.190.10 277 328 8.9E-33 T 09-03-2017 NA29_RS11475 390b7e5c99090f35d7b87d55797aba5a 347 Gene3D G3DSA:3.40.190.10 4 131 8.9E-33 T 09-03-2017 NA29_RS11475 390b7e5c99090f35d7b87d55797aba5a 347 SUPERFAMILY SSF53850 30 340 2.65E-51 T 09-03-2017 NA29_RS12535 a35e79af10fc33aa8edbe79a9660b712 514 Gene3D G3DSA:1.20.1250.20 8 185 1.6E-22 T 09-03-2017 NA29_RS12535 a35e79af10fc33aa8edbe79a9660b712 514 Pfam PF07690 Major Facilitator Superfamily 15 407 4.4E-41 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS12535 a35e79af10fc33aa8edbe79a9660b712 514 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 8.4E-5 T 09-03-2017 NA29_RS12535 a35e79af10fc33aa8edbe79a9660b712 514 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 8.4E-5 T 09-03-2017 NA29_RS12535 a35e79af10fc33aa8edbe79a9660b712 514 PRINTS PR01036 Tetracycline resistance protein TetB signature 158 182 8.4E-5 T 09-03-2017 NA29_RS12535 a35e79af10fc33aa8edbe79a9660b712 514 SUPERFAMILY SSF103473 246 417 7.72E-52 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS12535 a35e79af10fc33aa8edbe79a9660b712 514 SUPERFAMILY SSF103473 4 191 7.72E-52 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS12535 a35e79af10fc33aa8edbe79a9660b712 514 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 7 497 3.9E-119 T 09-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 NA29_RS12535 a35e79af10fc33aa8edbe79a9660b712 514 Gene3D G3DSA:1.20.1250.20 482 501 2.8E-16 T 09-03-2017 NA29_RS12535 a35e79af10fc33aa8edbe79a9660b712 514 Gene3D G3DSA:1.20.1250.20 261 423 2.8E-16 T 09-03-2017 NA29_RS09660 1792af9e7bf0b4d13600b75846eff5c8 97 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 29 89 8.0E-16 T 09-03-2017 IPR007633 Bacteriophage P2, GpY, holin NA29_RS09660 1792af9e7bf0b4d13600b75846eff5c8 97 Pfam PF04550 Phage holin family 2 6 88 6.2E-34 T 09-03-2017 IPR007633 Bacteriophage P2, GpY, holin NA29_RS15505 114a0294d4b9953670716eae32540692 150 Pfam PF05425 Copper resistance protein D 47 148 2.3E-16 T 09-03-2017 IPR008457 Copper resistance protein D GO:0016021 NA29_RS13960 cb02f75bd5bbb961cb506fce112b8979 237 SUPERFAMILY SSF63380 94 201 7.06E-26 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS13960 cb02f75bd5bbb961cb506fce112b8979 237 Gene3D G3DSA:2.40.30.20 5 104 2.2E-23 T 09-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 NA29_RS13960 cb02f75bd5bbb961cb506fce112b8979 237 Gene3D G3DSA:2.40.30.20 105 203 1.1E-23 T 09-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 NA29_RS13960 cb02f75bd5bbb961cb506fce112b8979 237 SUPERFAMILY SSF63380 1 89 2.13E-20 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 NA29_RS13960 cb02f75bd5bbb961cb506fce112b8979 237 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 3.9E-53 T 09-03-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS13960 cb02f75bd5bbb961cb506fce112b8979 237 PIRSF PIRSF000498 1 213 9.6E-55 T 09-03-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS13960 cb02f75bd5bbb961cb506fce112b8979 237 Pfam PF00677 Lumazine binding domain 3 88 2.4E-17 T 09-03-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS13960 cb02f75bd5bbb961cb506fce112b8979 237 Pfam PF00677 Lumazine binding domain 101 186 1.3E-17 T 09-03-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 NA29_RS24525 221c54b7c3a52557dd0adcf248ec497a 195 Pfam PF13580 SIS domain 9 145 5.9E-38 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 NA29_RS24525 221c54b7c3a52557dd0adcf248ec497a 195 SUPERFAMILY SSF53697 2 190 2.63E-59 T 09-03-2017 NA29_RS24525 221c54b7c3a52557dd0adcf248ec497a 195 Gene3D G3DSA:3.40.50.10490 4 190 5.5E-63 T 09-03-2017 NA29_RS24525 221c54b7c3a52557dd0adcf248ec497a 195 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 191 38.827 T 09-03-2017 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 NA29_RS24525 221c54b7c3a52557dd0adcf248ec497a 195 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 33 188 9.8E-65 T 09-03-2017 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 NA29_RS02200 f0ed0227178e5feec3a856f5c2e2e581 293 Gene3D G3DSA:1.10.620.20 14 187 1.2E-24 T 09-03-2017 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 NA29_RS02200 f0ed0227178e5feec3a856f5c2e2e581 293 SUPERFAMILY SSF47240 5 278 1.16E-48 T 09-03-2017 IPR009078 Ferritin-like superfamily NA29_RS09635 8c62f1842b58987ea8800a20b994c02e 393 Pfam PF04865 Baseplate J-like protein 80 330 5.7E-14 T 09-03-2017 IPR006949 Baseplate protein J-like NA29_RS17070 c2cf65d7974499d4b1a5cd62d5e3e242 329 Gene3D G3DSA:3.40.190.10 88 203 1.1E-11 T 09-03-2017 NA29_RS17070 c2cf65d7974499d4b1a5cd62d5e3e242 329 SUPERFAMILY SSF53850 49 135 5.43E-21 T 09-03-2017 NA29_RS17070 c2cf65d7974499d4b1a5cd62d5e3e242 329 SUPERFAMILY SSF53850 164 318 5.43E-21 T 09-03-2017 NA29_RS23255 7261293a9cef964e6b767ac5cbb2dd8a 567 Pfam PF12571 Phage tail-collar fibre protein 1 152 4.2E-44 T 09-03-2017 IPR022225 Phage tail fibre protein NA29_RS15975 e7767262f81aa9b3c484023c946904d7 247 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 126 242 8.1E-36 T 09-03-2017 IPR014162 Tol-Pal system, YbgF NA29_RS15975 e7767262f81aa9b3c484023c946904d7 247 Gene3D G3DSA:1.25.40.10 130 236 8.2E-8 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS15975 e7767262f81aa9b3c484023c946904d7 247 Pfam PF13525 Outer membrane lipoprotein 126 247 2.6E-16 T 09-03-2017 NA29_RS15975 e7767262f81aa9b3c484023c946904d7 247 Pfam PF16331 TolA binding protein trimerisation 50 112 2.5E-13 T 09-03-2017 IPR032519 YbgF, trimerisation domain GO:0070206 NA29_RS15975 e7767262f81aa9b3c484023c946904d7 247 SUPERFAMILY SSF48452 131 233 4.02E-10 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS06995 de2343a78a4c718b6c7eaed506029404 346 Pfam PF13609 Gram-negative porin 14 329 7.0E-57 T 09-03-2017 NA29_RS06995 de2343a78a4c718b6c7eaed506029404 346 SUPERFAMILY SSF56935 26 346 5.23E-71 T 09-03-2017 NA29_RS06995 de2343a78a4c718b6c7eaed506029404 346 Gene3D G3DSA:2.40.160.10 26 346 9.8E-78 T 09-03-2017 IPR023614 Porin domain NA29_RS24310 a0a2bf00f69fb8ed30f6eb6721e9c7d3 458 Pfam PF04888 Secretion system effector C (SseC) like family 69 297 3.1E-54 T 09-03-2017 IPR006972 Secretion system effector C, SseC-like GO:0009405 NA29_RS24310 a0a2bf00f69fb8ed30f6eb6721e9c7d3 458 Pfam PF04888 Secretion system effector C (SseC) like family 301 456 7.3E-18 T 09-03-2017 IPR006972 Secretion system effector C, SseC-like GO:0009405 NA29_RS09805 4a899a964c286cb4f4b217e65b3d9a7b 561 Pfam PF15984 Bacterial collagen, middle region 131 333 4.9E-55 T 09-03-2017 IPR031929 Bacterial collagen-like protein, middle domain NA29_RS14755 a82327671685af2b387e8ab05bea497a 321 Gene3D G3DSA:3.30.70.1070 241 317 1.7E-11 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 NA29_RS14755 a82327671685af2b387e8ab05bea497a 321 SUPERFAMILY SSF110997 244 317 2.75E-11 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 NA29_RS14755 a82327671685af2b387e8ab05bea497a 321 Pfam PF05036 Sporulation related domain 245 317 5.7E-11 T 09-03-2017 IPR007730 Sporulation-related domain GO:0042834 NA29_RS10615 4a92dc212d8f7c1375e81ab2a0edaa15 175 Pfam PF05229 Spore Coat Protein U domain 34 172 1.4E-23 T 09-03-2017 IPR007893 Spore coat protein U NA29_RS10615 4a92dc212d8f7c1375e81ab2a0edaa15 175 SMART SM00972 113 172 6.8E-15 T 09-03-2017 IPR007893 Spore coat protein U NA29_RS15415 8dfa571ad239a4198496bed11b583c1a 133 Pfam PF00034 Cytochrome c 30 125 3.5E-10 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS15415 8dfa571ad239a4198496bed11b583c1a 133 Gene3D G3DSA:1.10.760.10 18 126 5.7E-20 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS15415 8dfa571ad239a4198496bed11b583c1a 133 SUPERFAMILY SSF46626 9 127 2.36E-15 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS08945 f5599303d8d8e37ed9310b3175f92f41 377 Gene3D G3DSA:3.40.190.10 181 286 8.8E-23 T 09-03-2017 NA29_RS08945 f5599303d8d8e37ed9310b3175f92f41 377 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 101 328 6.0E-38 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS08945 f5599303d8d8e37ed9310b3175f92f41 377 SUPERFAMILY SSF53850 88 328 4.66E-46 T 09-03-2017 NA29_RS08945 f5599303d8d8e37ed9310b3175f92f41 377 Gene3D G3DSA:3.40.190.10 93 180 1.6E-20 T 09-03-2017 NA29_RS08945 f5599303d8d8e37ed9310b3175f92f41 377 Gene3D G3DSA:3.40.190.10 287 328 1.6E-20 T 09-03-2017 NA29_RS08945 f5599303d8d8e37ed9310b3175f92f41 377 SMART SM00062 98 330 3.6E-33 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS06460 aaad2d346e326ebbd46b028ab28d769d 528 Gene3D G3DSA:3.40.309.10 272 459 1.2E-34 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS06460 aaad2d346e326ebbd46b028ab28d769d 528 SUPERFAMILY SSF53720 7 503 4.45E-75 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS06460 aaad2d346e326ebbd46b028ab28d769d 528 Pfam PF00171 Aldehyde dehydrogenase family 17 465 1.5E-60 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS06460 aaad2d346e326ebbd46b028ab28d769d 528 Gene3D G3DSA:3.40.605.10 10 271 1.2E-39 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS11300 e665e5811f7a8671b92922331b8d9376 185 SUPERFAMILY SSF54593 6 148 5.1E-39 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS11300 e665e5811f7a8671b92922331b8d9376 185 Gene3D G3DSA:3.10.180.10 8 154 3.1E-43 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS11300 e665e5811f7a8671b92922331b8d9376 185 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 135 2.4E-27 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NA29_RS16905 5fd93549df3343a9790a77ef2c90d739 373 SUPERFAMILY SSF102114 22 308 1.63E-53 T 09-03-2017 NA29_RS16905 5fd93549df3343a9790a77ef2c90d739 373 Pfam PF11946 Domain of unknown function (DUF3463) 195 327 6.2E-60 T 09-03-2017 IPR022563 Domain of unknown function DUF3463 NA29_RS16905 5fd93549df3343a9790a77ef2c90d739 373 Gene3D G3DSA:3.20.20.70 21 310 1.4E-42 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS16905 5fd93549df3343a9790a77ef2c90d739 373 SMART SM00729 28 227 0.0017 T 09-03-2017 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 NA29_RS16905 5fd93549df3343a9790a77ef2c90d739 373 TIGRFAM TIGR03470 HpnH: hopanoid biosynthesis associated radical SAM protein HpnH 1 319 1.0E-168 T 09-03-2017 IPR017833 Hopanoid biosynthesis associated radical SAM protein HpnH NA29_RS16905 5fd93549df3343a9790a77ef2c90d739 373 Pfam PF04055 Radical SAM superfamily 34 183 2.5E-11 T 09-03-2017 IPR007197 Radical SAM GO:0003824|GO:0051536 NA29_RS03090 b68fec7b4161a538a42bc1f68b028135 780 Pfam PF01734 Patatin-like phospholipase 64 255 2.9E-27 T 09-03-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NA29_RS03090 b68fec7b4161a538a42bc1f68b028135 780 SUPERFAMILY SSF52151 59 132 9.68E-54 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NA29_RS03090 b68fec7b4161a538a42bc1f68b028135 780 SUPERFAMILY SSF52151 161 348 9.68E-54 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NA29_RS03090 b68fec7b4161a538a42bc1f68b028135 780 Gene3D G3DSA:3.40.1090.10 64 257 1.8E-11 T 09-03-2017 NA29_RS22850 4fe668d19155bea946e8481089ed4a4c 175 Pfam PF03975 CheD chemotactic sensory transduction 49 152 2.5E-19 T 09-03-2017 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 NA29_RS22850 4fe668d19155bea946e8481089ed4a4c 175 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 3 157 19.748 T 09-03-2017 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 NA29_RS22850 4fe668d19155bea946e8481089ed4a4c 175 SUPERFAMILY SSF64438 7 156 1.1E-30 T 09-03-2017 IPR011324 Cytotoxic necrotizing factor-like, catalytic NA29_RS18150 e3f7bddf44441ae0e8484ed1df6b2832 281 SUPERFAMILY SSF53474 133 263 7.55E-16 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS18150 e3f7bddf44441ae0e8484ed1df6b2832 281 Gene3D G3DSA:3.40.50.1820 134 260 2.8E-14 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS03765 6f9237b4433234710868b58257384ec1 319 Pfam PF00753 Metallo-beta-lactamase superfamily 33 221 2.8E-13 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS03765 6f9237b4433234710868b58257384ec1 319 SUPERFAMILY SSF56281 14 310 1.4E-58 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS03765 6f9237b4433234710868b58257384ec1 319 Gene3D G3DSA:3.60.15.10 9 244 3.0E-54 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS03765 6f9237b4433234710868b58257384ec1 319 SMART SM00849 33 222 9.9E-19 T 09-03-2017 IPR001279 Metallo-beta-lactamase NA29_RS01150 68aed2d1ebdf6f15f6c5cbc0aa4fd60a 232 SUPERFAMILY SSF52402 5 211 4.19E-56 T 09-03-2017 NA29_RS01150 68aed2d1ebdf6f15f6c5cbc0aa4fd60a 232 Pfam PF01902 Diphthamide synthase 9 199 2.4E-36 T 09-03-2017 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 NA29_RS01150 68aed2d1ebdf6f15f6c5cbc0aa4fd60a 232 Gene3D G3DSA:3.40.50.620 6 145 7.8E-26 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS01150 68aed2d1ebdf6f15f6c5cbc0aa4fd60a 232 Gene3D G3DSA:3.90.1490.10 147 208 4.7E-15 T 09-03-2017 NA29_RS02830 490ee3d6fb828a117fcb8971f1cc33e4 410 PIRSF PIRSF007313 1 393 2.1E-156 T 09-03-2017 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 NA29_RS02830 490ee3d6fb828a117fcb8971f1cc33e4 410 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 382 2.8E-159 T 09-03-2017 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 NA29_RS25130 7da791b9f7f081e2ebb828be8f7d10e7 225 Pfam PF02527 rRNA small subunit methyltransferase G 34 218 8.7E-48 T 09-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 NA29_RS25130 7da791b9f7f081e2ebb828be8f7d10e7 225 PIRSF PIRSF003078 12 224 2.8E-49 T 09-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 NA29_RS25130 7da791b9f7f081e2ebb828be8f7d10e7 225 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 26 220 25.655 T 09-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 NA29_RS25130 7da791b9f7f081e2ebb828be8f7d10e7 225 SUPERFAMILY SSF53335 18 221 2.87E-37 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS25130 7da791b9f7f081e2ebb828be8f7d10e7 225 Gene3D G3DSA:3.40.50.150 13 222 8.1E-60 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS25130 7da791b9f7f081e2ebb828be8f7d10e7 225 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 38 221 4.3E-44 T 09-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 NA29_RS19890 98ca8928e3e74bf4165c2b0a29496f91 55 Pfam PF00471 Ribosomal protein L33 8 53 2.5E-17 T 09-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS19890 98ca8928e3e74bf4165c2b0a29496f91 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.4E-24 T 09-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS19890 98ca8928e3e74bf4165c2b0a29496f91 55 SUPERFAMILY SSF57829 1 53 7.32E-19 T 09-03-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 NA29_RS19890 98ca8928e3e74bf4165c2b0a29496f91 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.454 T 09-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS19890 98ca8928e3e74bf4165c2b0a29496f91 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 09-03-2017 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS12830 4a91209cfbcb8138a984693c41fda06d 304 Pfam PF05235 CHAD domain 32 256 2.8E-36 T 09-03-2017 IPR007899 CHAD domain NA29_RS12830 4a91209cfbcb8138a984693c41fda06d 304 SMART SM00880 13 291 3.9E-35 T 09-03-2017 IPR007899 CHAD domain NA29_RS10070 fc01808964fda4285b1d1356edb81a8f 476 Pfam PF08811 Protein of unknown function (DUF1800) 9 416 4.7E-115 T 09-03-2017 IPR014917 Protein of unknown function DUF1800 NA29_RS23980 339aba3ea34ef9149490526e6a0a95b8 491 Gene3D G3DSA:3.40.309.10 269 454 7.2E-57 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS23980 339aba3ea34ef9149490526e6a0a95b8 491 Pfam PF00171 Aldehyde dehydrogenase family 26 477 1.7E-146 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS23980 339aba3ea34ef9149490526e6a0a95b8 491 SUPERFAMILY SSF53720 15 480 3.01E-142 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS23980 339aba3ea34ef9149490526e6a0a95b8 491 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS23980 339aba3ea34ef9149490526e6a0a95b8 491 Gene3D G3DSA:3.40.605.10 17 268 8.8E-84 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS23980 339aba3ea34ef9149490526e6a0a95b8 491 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS13630 3b1ec2f26224f9852d6d2725b2cfae2c 343 Gene3D G3DSA:3.40.190.10 48 138 7.0E-16 T 09-03-2017 NA29_RS13630 3b1ec2f26224f9852d6d2725b2cfae2c 343 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 32 339 6.3E-149 T 09-03-2017 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 NA29_RS13630 3b1ec2f26224f9852d6d2725b2cfae2c 343 Pfam PF13531 Bacterial extracellular solute-binding protein 41 293 1.6E-50 T 09-03-2017 NA29_RS13630 3b1ec2f26224f9852d6d2725b2cfae2c 343 SUPERFAMILY SSF53850 36 341 5.44E-93 T 09-03-2017 NA29_RS13630 3b1ec2f26224f9852d6d2725b2cfae2c 343 Gene3D G3DSA:3.40.190.10 139 291 1.3E-77 T 09-03-2017 NA29_RS13630 3b1ec2f26224f9852d6d2725b2cfae2c 343 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 73 - T 09-03-2017 IPR010916 TonB box, conserved site NA29_RS02425 9ab2c00b3be34aab3da189866f039e33 250 Pfam PF00899 ThiF family 9 244 2.0E-65 T 09-03-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 NA29_RS02425 9ab2c00b3be34aab3da189866f039e33 250 Gene3D G3DSA:3.40.50.720 3 248 8.7E-76 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS02425 9ab2c00b3be34aab3da189866f039e33 250 SUPERFAMILY SSF69572 2 249 1.24E-88 T 09-03-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 NA29_RS21580 e8d21a3ce9047b62bd4eec1edbf179b4 107 SMART SM00450 7 102 1.0E-22 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS21580 e8d21a3ce9047b62bd4eec1edbf179b4 107 Pfam PF00581 Rhodanese-like domain 7 98 2.9E-17 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS21580 e8d21a3ce9047b62bd4eec1edbf179b4 107 SUPERFAMILY SSF52821 2 105 6.94E-33 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS21580 e8d21a3ce9047b62bd4eec1edbf179b4 107 Gene3D G3DSA:3.40.250.10 2 106 2.5E-33 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS00950 fd6829db98d9415768459b558a7e7274 170 PIRSF PIRSF018472 4 164 2.7E-42 T 09-03-2017 IPR026034 Cell shape-determining protein MreD, proteobacterial type NA29_RS00950 fd6829db98d9415768459b558a7e7274 170 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 12 155 6.7E-27 T 09-03-2017 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 NA29_RS00950 fd6829db98d9415768459b558a7e7274 170 Pfam PF04093 rod shape-determining protein MreD 12 154 4.8E-17 T 09-03-2017 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 NA29_RS12490 33badeb77259490aab9a81be29a696f5 51 Pfam PF11752 Protein of unknown function (DUF3309) 3 51 4.2E-23 T 09-03-2017 IPR021738 Protein of unknown function DUF3309 NA29_RS14270 03a2d665ff08217dd1075b21e84652dd 438 Gene3D G3DSA:1.10.287.950 316 386 2.3E-4 T 09-03-2017 NA29_RS20350 f0f081f6de8f3eab6239067559e9c676 142 Gene3D G3DSA:3.40.30.10 21 119 1.2E-11 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS20350 f0f081f6de8f3eab6239067559e9c676 142 SUPERFAMILY SSF52833 12 125 7.22E-19 T 09-03-2017 IPR012336 Thioredoxin-like fold NA29_RS20350 f0f081f6de8f3eab6239067559e9c676 142 Pfam PF00085 Thioredoxin 22 112 6.5E-5 T 09-03-2017 IPR013766 Thioredoxin domain GO:0045454 NA29_RS06815 d61ff88dd0d36bea4c782153b0f4ba9d 228 SUPERFAMILY SSF56529 41 211 2.44E-10 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS06815 d61ff88dd0d36bea4c782153b0f4ba9d 228 Pfam PF11010 Protein of unknown function (DUF2848) 28 219 6.5E-86 T 09-03-2017 IPR021269 Protein of unknown function DUF2848 NA29_RS18560 bac71fe93d30206aa8e6b5dc3e324dba 45 Pfam PF08085 Entericidin EcnA/B family 21 41 3.6E-10 T 09-03-2017 IPR012556 Entericidin A/B GO:0009636|GO:0016020 NA29_RS14165 c0ada3d36eb8b3a4da84866b4152f8ee 84 Pfam PF07369 Protein of unknown function (DUF1488) 14 74 1.2E-6 T 09-03-2017 IPR009962 Protein of unknown function DUF1488 NA29_RS14165 c0ada3d36eb8b3a4da84866b4152f8ee 84 SUPERFAMILY SSF160272 15 74 5.62E-7 T 09-03-2017 IPR009962 Protein of unknown function DUF1488 NA29_RS14165 c0ada3d36eb8b3a4da84866b4152f8ee 84 Gene3D G3DSA:3.30.160.140 16 74 3.5E-4 T 09-03-2017 IPR009962 Protein of unknown function DUF1488 NA29_RS09505 d7d797fac35e34e61d9f2653e4870dd6 131 SMART SM01034 1 95 6.0E-17 T 09-03-2017 IPR007024 BLUF domain GO:0009882|GO:0071949 NA29_RS09505 d7d797fac35e34e61d9f2653e4870dd6 131 Pfam PF04940 Sensors of blue-light using FAD 5 93 6.0E-20 T 09-03-2017 IPR007024 BLUF domain GO:0009882|GO:0071949 NA29_RS09505 d7d797fac35e34e61d9f2653e4870dd6 131 SUPERFAMILY SSF54975 4 103 4.91E-23 T 09-03-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 NA29_RS21160 70b16f2e308110f0cd255fdfca026406 517 Gene3D G3DSA:2.60.40.10 411 516 5.2E-34 T 09-03-2017 IPR013783 Immunoglobulin-like fold NA29_RS21160 70b16f2e308110f0cd255fdfca026406 517 PIRSF PIRSF006281 1 517 4.0E-223 T 09-03-2017 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D NA29_RS21160 70b16f2e308110f0cd255fdfca026406 517 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 19 516 59.994 T 09-03-2017 IPR023704 Glucan biosynthesis protein G NA29_RS21160 70b16f2e308110f0cd255fdfca026406 517 SUPERFAMILY SSF81296 410 516 3.22E-29 T 09-03-2017 IPR014756 Immunoglobulin E-set NA29_RS21160 70b16f2e308110f0cd255fdfca026406 517 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 38 513 5.1E-207 T 09-03-2017 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 NA29_RS21160 70b16f2e308110f0cd255fdfca026406 517 SUPERFAMILY SSF74650 38 409 2.39E-165 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 NA29_RS21160 70b16f2e308110f0cd255fdfca026406 517 Gene3D G3DSA:2.70.98.10 37 410 3.7E-177 T 09-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 NA29_RS14750 da36d3a1691a02b68b52826ef00c8fbb 310 Pfam PF02674 Colicin V production protein 9 149 1.7E-33 T 09-03-2017 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 NA29_RS25105 58bb212656afd48030e265c71d3c5dee 166 Pfam PF03899 ATP synthase I chain 58 153 2.8E-17 T 09-03-2017 IPR005598 ATP synthase protein I NA29_RS02825 4b31b911707dcb5f577d281039b2a6c4 308 Pfam PF06007 Phosphonate metabolism protein PhnJ 23 293 1.1E-144 T 09-03-2017 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 NA29_RS02825 4b31b911707dcb5f577d281039b2a6c4 308 PIRSF PIRSF011468 14 306 9.3E-156 T 09-03-2017 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 NA29_RS19910 495da05ed5879e238eca420f3b05d182 398 Pfam PF00487 Fatty acid desaturase 18 220 2.1E-12 T 09-03-2017 IPR005804 Fatty acid desaturase domain GO:0006629 NA29_RS19910 495da05ed5879e238eca420f3b05d182 398 Pfam PF01610 Transposase 302 397 4.1E-10 T 09-03-2017 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain NA29_RS24935 b307d4f9323fa3b7f69f2d503a21a669 111 Pfam PF04316 Anti-sigma-28 factor, FlgM 49 98 2.0E-11 T 09-03-2017 IPR031316 Anti-sigma-28 factor FlgM, C-terminal NA29_RS24935 b307d4f9323fa3b7f69f2d503a21a669 111 SUPERFAMILY SSF101498 25 100 1.57E-11 T 09-03-2017 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 NA29_RS24935 b307d4f9323fa3b7f69f2d503a21a669 111 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 13 101 8.2E-18 T 09-03-2017 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 NA29_RS10710 7636d1b634bb9847f05dfb92af5484b0 97 Pfam PF07369 Protein of unknown function (DUF1488) 3 73 4.4E-21 T 09-03-2017 IPR009962 Protein of unknown function DUF1488 NA29_RS10710 7636d1b634bb9847f05dfb92af5484b0 97 SUPERFAMILY SSF160272 1 77 1.44E-15 T 09-03-2017 IPR009962 Protein of unknown function DUF1488 NA29_RS10710 7636d1b634bb9847f05dfb92af5484b0 97 Gene3D G3DSA:3.30.160.140 1 68 2.8E-11 T 09-03-2017 IPR009962 Protein of unknown function DUF1488 NA29_RS16345 9b4aaa95c6a27fbe5e8b4460e25a0a1e 205 Pfam PF01810 LysE type translocator 17 201 1.2E-29 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS05940 ccb41f8d534044d140757ec37f3dc428 61 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 3 60 1.7E-11 T 09-03-2017 IPR012933 HicA mRNA interferase family GO:0003729 NA29_RS05940 ccb41f8d534044d140757ec37f3dc428 61 SUPERFAMILY SSF54786 1 61 7.45E-11 T 09-03-2017 NA29_RS05940 ccb41f8d534044d140757ec37f3dc428 61 Gene3D G3DSA:3.30.920.30 1 61 1.2E-10 T 09-03-2017 NA29_RS24565 0694e85f82759a41b4f0335998ff2dc9 262 SUPERFAMILY SSF53098 15 199 3.86E-24 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS24565 0694e85f82759a41b4f0335998ff2dc9 262 Gene3D G3DSA:3.30.420.10 16 201 3.4E-10 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS02915 a17fa7d5993f643cd8741878917c922e 35 Gene3D G3DSA:2.160.20.20 1 34 7.0E-4 T 09-03-2017 IPR012332 P22 tailspike C-terminal domain-like NA29_RS02915 a17fa7d5993f643cd8741878917c922e 35 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 6 34 1.1E-10 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS02915 a17fa7d5993f643cd8741878917c922e 35 SUPERFAMILY SSF51126 1 34 2.89E-5 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor NA29_RS02915 a17fa7d5993f643cd8741878917c922e 35 Pfam PF12951 Passenger-associated-transport-repeat 7 35 4.5E-9 T 09-03-2017 IPR013425 Autotransporter-associated beta strand repeat NA29_RS06450 9c2c71905da08a1a17995cb51551798e 273 Pfam PF12697 Alpha/beta hydrolase family 34 255 1.3E-14 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS06450 9c2c71905da08a1a17995cb51551798e 273 SUPERFAMILY SSF53474 15 264 8.11E-43 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS06450 9c2c71905da08a1a17995cb51551798e 273 Gene3D G3DSA:3.40.50.1820 15 264 3.8E-42 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS00830 652b0730cea6bcb120aaaa71b6a339fb 707 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 135 158 - T 09-03-2017 IPR025505 FHIPEP conserved site NA29_RS00830 652b0730cea6bcb120aaaa71b6a339fb 707 PIRSF PIRSF005419 3 707 3.6E-208 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS00830 652b0730cea6bcb120aaaa71b6a339fb 707 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 12 707 1.6E-243 T 09-03-2017 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 NA29_RS00830 652b0730cea6bcb120aaaa71b6a339fb 707 Pfam PF00771 FHIPEP family 24 698 7.4E-211 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS00830 652b0730cea6bcb120aaaa71b6a339fb 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 130 146 3.9E-55 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS00830 652b0730cea6bcb120aaaa71b6a339fb 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 31 44 3.9E-55 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS00830 652b0730cea6bcb120aaaa71b6a339fb 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 68 87 3.9E-55 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS00830 652b0730cea6bcb120aaaa71b6a339fb 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 230 244 3.9E-55 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS00830 652b0730cea6bcb120aaaa71b6a339fb 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 179 196 3.9E-55 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS00830 652b0730cea6bcb120aaaa71b6a339fb 707 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 149 167 3.9E-55 T 09-03-2017 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 NA29_RS03320 7b525880cf7360388051a31a6acacc12 232 Gene3D G3DSA:3.90.850.10 22 232 1.3E-77 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS03320 7b525880cf7360388051a31a6acacc12 232 SUPERFAMILY SSF56529 22 232 2.22E-67 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS03320 7b525880cf7360388051a31a6acacc12 232 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 27 232 1.3E-54 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS02275 3983c3b9da06bc5e48e70e409385dbf7 282 Gene3D G3DSA:3.20.10.10 123 277 8.3E-38 T 09-03-2017 NA29_RS02275 3983c3b9da06bc5e48e70e409385dbf7 282 SUPERFAMILY SSF56752 4 277 7.06E-70 T 09-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 NA29_RS02275 3983c3b9da06bc5e48e70e409385dbf7 282 Gene3D G3DSA:3.30.470.10 6 120 3.2E-37 T 09-03-2017 NA29_RS02275 3983c3b9da06bc5e48e70e409385dbf7 282 Pfam PF01063 Amino-transferase class IV 32 251 3.5E-38 T 09-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 NA29_RS14590 1aa1d70ad5aa95d2e4b49df87991d37f 364 SUPERFAMILY SSF161098 149 336 3.14E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS14590 1aa1d70ad5aa95d2e4b49df87991d37f 364 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 59 2.1E-8 T 09-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain NA29_RS14590 1aa1d70ad5aa95d2e4b49df87991d37f 364 Gene3D G3DSA:1.10.3720.10 145 350 9.1E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS14590 1aa1d70ad5aa95d2e4b49df87991d37f 364 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 168 353 4.0E-32 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS12375 f3aec28f9e28cc78bc4d54406644d3ae 318 SUPERFAMILY SSF46785 17 127 3.74E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12375 f3aec28f9e28cc78bc4d54406644d3ae 318 Pfam PF03466 LysR substrate binding domain 103 309 7.0E-23 T 09-03-2017 IPR005119 LysR, substrate-binding NA29_RS12375 f3aec28f9e28cc78bc4d54406644d3ae 318 Gene3D G3DSA:1.10.10.10 18 102 8.9E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12375 f3aec28f9e28cc78bc4d54406644d3ae 318 Gene3D G3DSA:3.40.190.10 201 245 5.4E-12 T 09-03-2017 NA29_RS12375 f3aec28f9e28cc78bc4d54406644d3ae 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 77 1.3E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS12375 f3aec28f9e28cc78bc4d54406644d3ae 318 SUPERFAMILY SSF53850 103 313 4.16E-24 T 09-03-2017 NA29_RS12375 f3aec28f9e28cc78bc4d54406644d3ae 318 Gene3D G3DSA:3.40.190.10 108 200 5.5E-18 T 09-03-2017 NA29_RS12375 f3aec28f9e28cc78bc4d54406644d3ae 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 55 2.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS12375 f3aec28f9e28cc78bc4d54406644d3ae 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 2.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS12375 f3aec28f9e28cc78bc4d54406644d3ae 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 66 2.6E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 NA29_RS01435 2e2c42c32af8d44fa7d3e3d5661a7d62 540 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 246 536 2.0E-127 T 09-03-2017 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type NA29_RS01435 2e2c42c32af8d44fa7d3e3d5661a7d62 540 Pfam PF02653 Branched-chain amino acid transport system / permease component 247 521 9.3E-50 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS19510 6acf8bec4be90ad683d4e1b5a55ecbe2 295 Gene3D G3DSA:3.90.550.10 5 268 3.7E-73 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS19510 6acf8bec4be90ad683d4e1b5a55ecbe2 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 6 290 1.7E-157 T 09-03-2017 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 NA29_RS19510 6acf8bec4be90ad683d4e1b5a55ecbe2 295 SUPERFAMILY SSF53448 5 290 3.38E-96 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS19510 6acf8bec4be90ad683d4e1b5a55ecbe2 295 Pfam PF00483 Nucleotidyl transferase 6 242 3.9E-70 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 NA29_RS14850 cf2d6bf67c8c68ee7f861cf151f48abb 137 SUPERFAMILY SSF81343 1 133 1.19E-28 T 09-03-2017 NA29_RS14850 cf2d6bf67c8c68ee7f861cf151f48abb 137 PIRSF PIRSF000178 1 134 6.1E-28 T 09-03-2017 NA29_RS14850 cf2d6bf67c8c68ee7f861cf151f48abb 137 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 128 3.1E-26 T 09-03-2017 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS14850 cf2d6bf67c8c68ee7f861cf151f48abb 137 Gene3D G3DSA:1.20.1300.10 2 134 3.2E-38 T 09-03-2017 NA29_RS14850 cf2d6bf67c8c68ee7f861cf151f48abb 137 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 130 3.4E-34 T 09-03-2017 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 NA29_RS19320 a54cdddfac5d7dbfa699cf8fba8d9acf 405 SUPERFAMILY SSF53383 10 395 6.71E-108 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS19320 a54cdddfac5d7dbfa699cf8fba8d9acf 405 Pfam PF00155 Aminotransferase class I and II 37 388 9.6E-61 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 NA29_RS19320 a54cdddfac5d7dbfa699cf8fba8d9acf 405 Gene3D G3DSA:3.40.640.10 50 263 1.4E-63 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS19320 a54cdddfac5d7dbfa699cf8fba8d9acf 405 Gene3D G3DSA:3.90.1150.10 264 396 2.9E-45 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 NA29_RS12925 cbb8101b250941e730dfb19b542af798 401 Gene3D G3DSA:1.10.760.10 292 396 2.4E-5 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS12925 cbb8101b250941e730dfb19b542af798 401 SUPERFAMILY SSF46626 294 398 1.37E-7 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS12925 cbb8101b250941e730dfb19b542af798 401 Pfam PF06181 Protein of unknown function (DUF989) 4 298 3.0E-138 T 09-03-2017 IPR010389 Domain of unknown function DUF989 NA29_RS19720 c348f072b36e7018cb4a821f6e1b17d7 240 Gene3D G3DSA:1.10.3720.10 11 228 1.1E-40 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS19720 c348f072b36e7018cb4a821f6e1b17d7 240 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 78 3.9E-16 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 NA29_RS19720 c348f072b36e7018cb4a821f6e1b17d7 240 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 220 4.5E-11 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS19720 c348f072b36e7018cb4a821f6e1b17d7 240 SUPERFAMILY SSF161098 12 220 7.98E-36 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS22285 7757a45665675c2e01a8338360ceb537 170 Pfam PF06897 Protein of unknown function (DUF1269) 66 155 8.0E-8 T 09-03-2017 IPR009200 Protein of unknown function DUF1269, membrane associated NA29_RS08995 fc9814f350ac5008408d25a90cb50e9a 837 Pfam PF02687 FtsX-like permease family 260 366 1.9E-9 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 NA29_RS08995 fc9814f350ac5008408d25a90cb50e9a 837 Pfam PF02687 FtsX-like permease family 717 828 5.9E-13 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 NA29_RS12945 d8243ce81f700fc1a016d4497af2644a 332 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 327 2.0E-106 T 09-03-2017 IPR007296 Domain of unknown function DUF403 NA29_RS22620 232394cb32965d4cd7a86824a66898d9 501 Gene3D G3DSA:3.60.120.10 13 494 1.3E-171 T 09-03-2017 IPR005801 ADC synthase GO:0009058 NA29_RS22620 232394cb32965d4cd7a86824a66898d9 501 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 490 5.2E-162 T 09-03-2017 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 NA29_RS22620 232394cb32965d4cd7a86824a66898d9 501 PRINTS PR00095 Anthranilate synthase component I signature 424 438 2.4E-23 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 NA29_RS22620 232394cb32965d4cd7a86824a66898d9 501 PRINTS PR00095 Anthranilate synthase component I signature 344 357 2.4E-23 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 NA29_RS22620 232394cb32965d4cd7a86824a66898d9 501 PRINTS PR00095 Anthranilate synthase component I signature 330 343 2.4E-23 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 NA29_RS22620 232394cb32965d4cd7a86824a66898d9 501 PRINTS PR00095 Anthranilate synthase component I signature 439 453 2.4E-23 T 09-03-2017 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 NA29_RS22620 232394cb32965d4cd7a86824a66898d9 501 Pfam PF00425 chorismate binding enzyme 221 482 1.4E-92 T 09-03-2017 IPR015890 Chorismate-utilising enzyme, C-terminal NA29_RS22620 232394cb32965d4cd7a86824a66898d9 501 SUPERFAMILY SSF56322 14 490 3.79E-151 T 09-03-2017 IPR005801 ADC synthase GO:0009058 NA29_RS22620 232394cb32965d4cd7a86824a66898d9 501 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 172 1.2E-33 T 09-03-2017 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 NA29_RS09870 52b0017592f65d714d7314f91a503d65 187 Pfam PF12266 Protein of unknown function (DUF3613) 108 157 6.1E-12 T 09-03-2017 IPR022053 Protein of unknown function DUF3613 NA29_RS01415 46ed945e470c1b1c7e65c9f7c924be96 280 Pfam PF01774 UreD urease accessory protein 51 254 2.2E-49 T 09-03-2017 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 NA29_RS01415 46ed945e470c1b1c7e65c9f7c924be96 280 Hamap MF_01384 Urease accessory protein UreD [ureD]. 8 264 28.655 T 09-03-2017 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 NA29_RS15475 318ca08dfa5efd00b77208d39f706d3e 228 Pfam PF13468 Glyoxalase-like domain 9 197 6.7E-37 T 09-03-2017 IPR025870 Glyoxalase-like domain NA29_RS18880 4b639a71fff4835c133b5384da7662ee 213 Pfam PF13690 Chemotaxis phosphatase CheX 66 166 3.0E-16 T 09-03-2017 IPR028051 Chemotaxis phosphatase CheX-like domain NA29_RS06455 547c6fb15545d6194bca94f5d00b10a4 521 Gene3D G3DSA:2.30.38.10 345 419 2.0E-17 T 09-03-2017 NA29_RS06455 547c6fb15545d6194bca94f5d00b10a4 521 Gene3D G3DSA:3.30.300.30 422 520 5.5E-27 T 09-03-2017 NA29_RS06455 547c6fb15545d6194bca94f5d00b10a4 521 Gene3D G3DSA:3.40.50.980 164 187 1.3E-32 T 09-03-2017 NA29_RS06455 547c6fb15545d6194bca94f5d00b10a4 521 Gene3D G3DSA:3.40.50.980 17 125 1.3E-32 T 09-03-2017 NA29_RS06455 547c6fb15545d6194bca94f5d00b10a4 521 Pfam PF13193 AMP-binding enzyme C-terminal domain 434 511 2.7E-18 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS06455 547c6fb15545d6194bca94f5d00b10a4 521 Gene3D G3DSA:3.40.50.980 188 343 1.2E-35 T 09-03-2017 NA29_RS06455 547c6fb15545d6194bca94f5d00b10a4 521 SUPERFAMILY SSF56801 13 520 2.22E-140 T 09-03-2017 NA29_RS06455 547c6fb15545d6194bca94f5d00b10a4 521 TIGRFAM TIGR02262 benz_CoA_lig: benzoate-CoA ligase family 11 520 7.0E-227 T 09-03-2017 IPR011957 Benzoate-CoA ligase family GO:0005524|GO:0016405 NA29_RS06455 547c6fb15545d6194bca94f5d00b10a4 521 Pfam PF00501 AMP-binding enzyme 23 426 8.2E-91 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS04520 81f1102a6f63f75595b388783ac37147 267 Pfam PF11227 Protein of unknown function (DUF3025) 48 256 2.6E-84 T 09-03-2017 IPR021390 Protein of unknown function DUF3025 NA29_RS15445 b55155fcf025ac044bd46afbac571a08 280 Gene3D G3DSA:3.40.50.150 40 270 1.4E-49 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS15445 b55155fcf025ac044bd46afbac571a08 280 SUPERFAMILY SSF53335 40 253 1.7E-45 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS10195 83da8e20d2af046c57d6120a162f8321 145 Pfam PF11776 Nickel/cobalt transporter regulator 91 140 1.5E-22 T 09-03-2017 IPR024572 Nickel/cobalt homeostasis protein RcnB NA29_RS10195 83da8e20d2af046c57d6120a162f8321 145 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 87 141 2.0E-13 T 09-03-2017 IPR024572 Nickel/cobalt homeostasis protein RcnB NA29_RS16570 1e08ed549864ad395e2cd59e727cf2b4 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 246 2.1E-12 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16570 1e08ed549864ad395e2cd59e727cf2b4 260 Gene3D G3DSA:1.10.3720.10 3 248 9.9E-55 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS16570 1e08ed549864ad395e2cd59e727cf2b4 260 SUPERFAMILY SSF161098 4 259 7.41E-58 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS08245 ca80026f857eb5190c97f10794ee4708 391 Pfam PF12698 ABC-2 family transporter protein 29 383 6.4E-47 T 09-03-2017 NA29_RS16650 1c7c63f9ba9edee3578a816e290a7880 379 Pfam PF16113 Enoyl-CoA hydratase/isomerase 23 362 1.2E-118 T 09-03-2017 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 NA29_RS16650 1c7c63f9ba9edee3578a816e290a7880 379 Gene3D G3DSA:3.90.226.10 10 200 8.8E-56 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS16650 1c7c63f9ba9edee3578a816e290a7880 379 SUPERFAMILY SSF52096 12 203 2.11E-63 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS16650 1c7c63f9ba9edee3578a816e290a7880 379 SUPERFAMILY SSF52096 276 345 2.11E-63 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS16650 1c7c63f9ba9edee3578a816e290a7880 379 Gene3D G3DSA:1.10.12.10 288 336 3.9E-5 T 09-03-2017 IPR014748 Crontonase, C-terminal NA29_RS01240 f385e6524908dc314ab57080fba67921 390 SUPERFAMILY SSF54506 22 189 2.83E-65 T 09-03-2017 NA29_RS01240 f385e6524908dc314ab57080fba67921 390 Pfam PF04303 PrpF protein 23 379 3.5E-113 T 09-03-2017 IPR007400 PrpF protein NA29_RS01240 f385e6524908dc314ab57080fba67921 390 Gene3D G3DSA:3.10.310.10 198 356 1.1E-48 T 09-03-2017 NA29_RS01240 f385e6524908dc314ab57080fba67921 390 Gene3D G3DSA:3.10.310.10 21 197 1.3E-78 T 09-03-2017 NA29_RS01240 f385e6524908dc314ab57080fba67921 390 SUPERFAMILY SSF54506 193 384 2.35E-53 T 09-03-2017 NA29_RS18430 7666932c918a51facd876f93d67ea5d2 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 51 67 4.2E-39 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS18430 7666932c918a51facd876f93d67ea5d2 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 70 88 4.2E-39 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS18430 7666932c918a51facd876f93d67ea5d2 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 4.2E-39 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS18430 7666932c918a51facd876f93d67ea5d2 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 333 348 4.2E-39 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS18430 7666932c918a51facd876f93d67ea5d2 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 91 101 4.2E-39 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS18430 7666932c918a51facd876f93d67ea5d2 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 281 294 4.2E-39 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS18430 7666932c918a51facd876f93d67ea5d2 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 258 276 4.2E-39 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS18430 7666932c918a51facd876f93d67ea5d2 373 SUPERFAMILY SSF53822 27 366 2.09E-91 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS18430 7666932c918a51facd876f93d67ea5d2 373 Gene3D G3DSA:3.40.50.2300 27 228 3.4E-65 T 09-03-2017 NA29_RS18430 7666932c918a51facd876f93d67ea5d2 373 Pfam PF13458 Periplasmic binding protein 28 364 4.3E-61 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS04710 2d49ee8d33493d423b85b0645dc55185 237 Pfam PF13327 Type III secretion system subunit 19 202 6.4E-36 T 09-03-2017 IPR025292 Type III secretion system protein NA29_RS10725 09af180b1177e86802942343006ac652 249 Pfam PF08241 Methyltransferase domain 52 146 1.7E-20 T 09-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 NA29_RS10725 09af180b1177e86802942343006ac652 249 Gene3D G3DSA:3.40.50.150 11 212 2.4E-34 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS10725 09af180b1177e86802942343006ac652 249 SUPERFAMILY SSF53335 5 219 7.74E-39 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS11090 3c103712ca016ba0517bdd41972eb480 261 SMART SM00901 18 121 4.5E-28 T 09-03-2017 IPR014966 FRG domain NA29_RS11090 3c103712ca016ba0517bdd41972eb480 261 Pfam PF08867 FRG domain 22 116 4.5E-25 T 09-03-2017 IPR014966 FRG domain NA29_RS20715 d2e79e57c1ec3b0783f28649399a30ed 124 Pfam PF03640 Secreted repeat of unknown function 27 68 5.3E-13 T 09-03-2017 IPR005297 Lipoprotein repeat NA29_RS20715 d2e79e57c1ec3b0783f28649399a30ed 124 Pfam PF03640 Secreted repeat of unknown function 80 123 3.9E-21 T 09-03-2017 IPR005297 Lipoprotein repeat NA29_RS20715 d2e79e57c1ec3b0783f28649399a30ed 124 PIRSF PIRSF029720 1 124 3.7E-45 T 09-03-2017 IPR014558 Uncharacterised conserved lipoprotein NA29_RS16760 15266ee064bccb4f76a800cf15cdfb95 174 SMART SM00972 111 171 2.4E-12 T 09-03-2017 IPR007893 Spore coat protein U NA29_RS16760 15266ee064bccb4f76a800cf15cdfb95 174 Pfam PF05229 Spore Coat Protein U domain 34 171 1.4E-28 T 09-03-2017 IPR007893 Spore coat protein U NA29_RS13555 1eaab249b043fb637ae9ab9423e9fb5f 208 SUPERFAMILY SSF109755 46 201 7.85E-5 T 09-03-2017 NA29_RS13555 1eaab249b043fb637ae9ab9423e9fb5f 208 Pfam PF01865 Protein of unknown function DUF47 8 206 5.3E-26 T 09-03-2017 IPR018445 Putative phosphate transport regulator NA29_RS00025 5af83dc4d705174c1b186f01aaf05ecb 206 SUPERFAMILY SSF52402 1 205 1.43E-33 T 09-03-2017 NA29_RS00025 5af83dc4d705174c1b186f01aaf05ecb 206 Pfam PF06508 Queuosine biosynthesis protein QueC 4 203 1.7E-30 T 09-03-2017 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 NA29_RS00025 5af83dc4d705174c1b186f01aaf05ecb 206 Gene3D G3DSA:3.40.50.620 1 205 8.1E-39 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold NA29_RS25310 69449b258c910826c5fd2acf2066f7fb 101 Gene3D G3DSA:3.30.1360.20 2 95 4.3E-35 T 09-03-2017 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 NA29_RS25310 69449b258c910826c5fd2acf2066f7fb 101 SUPERFAMILY SSF55248 1 95 7.32E-34 T 09-03-2017 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 NA29_RS25310 69449b258c910826c5fd2acf2066f7fb 101 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 5 93 5.1E-31 T 09-03-2017 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 NA29_RS25310 69449b258c910826c5fd2acf2066f7fb 101 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 95 23.898 T 09-03-2017 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 NA29_RS23200 ca06cadf566922824c7e19440018a357 124 Pfam PF16931 Putative phage holin 1 121 2.7E-36 T 09-03-2017 IPR032637 Putative phage holin-like NA29_RS05880 a5449df30eb1b54f293299e88bf29d27 278 Pfam PF00899 ThiF family 33 272 2.3E-36 T 09-03-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 NA29_RS05880 a5449df30eb1b54f293299e88bf29d27 278 SUPERFAMILY SSF69572 20 277 1.44E-62 T 09-03-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 NA29_RS05880 a5449df30eb1b54f293299e88bf29d27 278 Gene3D G3DSA:3.40.50.720 20 275 1.0E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS23805 00bbf37bb21c002825791ed1683437c8 101 SUPERFAMILY SSF57716 2 101 2.07E-36 T 09-03-2017 NA29_RS23805 00bbf37bb21c002825791ed1683437c8 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 8.3E-26 T 09-03-2017 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23805 00bbf37bb21c002825791ed1683437c8 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.409 T 09-03-2017 IPR023036 Ribosomal protein S14, bacterial/plastid NA29_RS23805 00bbf37bb21c002825791ed1683437c8 101 Gene3D G3DSA:4.10.830.10 41 101 1.3E-29 T 09-03-2017 NA29_RS09355 8ff626a5ae22a9a3a1487081e1d1bd8c 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 1.4E-25 T 09-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 NA29_RS09355 8ff626a5ae22a9a3a1487081e1d1bd8c 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.16 T 09-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 NA29_RS09355 8ff626a5ae22a9a3a1487081e1d1bd8c 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 8.4E-17 T 09-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 NA29_RS09355 8ff626a5ae22a9a3a1487081e1d1bd8c 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 8.4E-17 T 09-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 NA29_RS09355 8ff626a5ae22a9a3a1487081e1d1bd8c 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 8.4E-17 T 09-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 NA29_RS09355 8ff626a5ae22a9a3a1487081e1d1bd8c 65 Pfam PF01632 Ribosomal protein L35 2 62 2.9E-24 T 09-03-2017 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS09355 8ff626a5ae22a9a3a1487081e1d1bd8c 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 09-03-2017 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS09355 8ff626a5ae22a9a3a1487081e1d1bd8c 65 SUPERFAMILY SSF143034 2 64 8.11E-23 T 09-03-2017 NA29_RS05935 e11bf5a77d6f8277d2ae1bbb5e3b8c75 395 Gene3D G3DSA:3.20.20.70 4 377 1.6E-142 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS05935 e11bf5a77d6f8277d2ae1bbb5e3b8c75 395 Pfam PF01070 FMN-dependent dehydrogenase 14 376 8.9E-136 T 09-03-2017 IPR000262 FMN-dependent dehydrogenase GO:0016491 NA29_RS05935 e11bf5a77d6f8277d2ae1bbb5e3b8c75 395 SUPERFAMILY SSF51395 5 195 1.04E-105 T 09-03-2017 NA29_RS05935 e11bf5a77d6f8277d2ae1bbb5e3b8c75 395 SUPERFAMILY SSF51395 224 376 1.04E-105 T 09-03-2017 NA29_RS05935 e11bf5a77d6f8277d2ae1bbb5e3b8c75 395 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 274 280 - T 09-03-2017 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 NA29_RS05935 e11bf5a77d6f8277d2ae1bbb5e3b8c75 395 PIRSF PIRSF000138 1 380 2.2E-128 T 09-03-2017 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 NA29_RS09930 ac7177741a7cc642334b464568da4b59 265 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 27 263 5.3E-49 T 09-03-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase NA29_RS09930 ac7177741a7cc642334b464568da4b59 265 Gene3D G3DSA:3.60.140.10 3 263 5.3E-91 T 09-03-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase NA29_RS09930 ac7177741a7cc642334b464568da4b59 265 SUPERFAMILY SSF64438 4 263 3.85E-74 T 09-03-2017 IPR011324 Cytotoxic necrotizing factor-like, catalytic NA29_RS09930 ac7177741a7cc642334b464568da4b59 265 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 21 262 5.6E-72 T 09-03-2017 IPR003730 Multi-copper polyphenol oxidoreductase, laccase NA29_RS20200 d2ba686852d0faf7dd2ae8e3ddf0b1f2 522 Gene3D G3DSA:3.40.50.980 187 341 3.7E-37 T 09-03-2017 NA29_RS20200 d2ba686852d0faf7dd2ae8e3ddf0b1f2 522 Gene3D G3DSA:3.30.300.30 427 521 2.9E-26 T 09-03-2017 NA29_RS20200 d2ba686852d0faf7dd2ae8e3ddf0b1f2 522 Pfam PF00501 AMP-binding enzyme 33 428 2.9E-92 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 NA29_RS20200 d2ba686852d0faf7dd2ae8e3ddf0b1f2 522 SUPERFAMILY SSF56801 23 521 4.06E-137 T 09-03-2017 NA29_RS20200 d2ba686852d0faf7dd2ae8e3ddf0b1f2 522 Gene3D G3DSA:3.40.50.980 28 186 3.0E-29 T 09-03-2017 NA29_RS20200 d2ba686852d0faf7dd2ae8e3ddf0b1f2 522 Gene3D G3DSA:2.30.38.10 347 419 8.7E-28 T 09-03-2017 NA29_RS20200 d2ba686852d0faf7dd2ae8e3ddf0b1f2 522 ProSitePatterns PS00455 Putative AMP-binding domain signature. 181 192 - T 09-03-2017 IPR020845 AMP-binding, conserved site NA29_RS20200 d2ba686852d0faf7dd2ae8e3ddf0b1f2 522 Pfam PF13193 AMP-binding enzyme C-terminal domain 438 512 3.5E-14 T 09-03-2017 IPR025110 AMP-binding enzyme C-terminal domain NA29_RS24135 ad9d60e5e321d56c88bca8bc1f1bbd54 236 Gene3D G3DSA:3.90.230.10 24 227 3.2E-13 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS24135 ad9d60e5e321d56c88bca8bc1f1bbd54 236 Pfam PF00557 Metallopeptidase family M24 26 213 2.2E-14 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS24135 ad9d60e5e321d56c88bca8bc1f1bbd54 236 SUPERFAMILY SSF55920 24 228 1.7E-24 T 09-03-2017 IPR000994 Peptidase M24, structural domain NA29_RS00780 2adc66222cd7da0ac6deb2c583f6c344 403 TIGRFAM TIGR02554 PrgH: type III secretion apparatus protein PrgH/EprH 17 399 1.0E-80 T 09-03-2017 IPR013387 Type III secretion system, PrgH/EprH NA29_RS00780 2adc66222cd7da0ac6deb2c583f6c344 403 Pfam PF09480 Type III secretion system protein PrgH-EprH (PrgH) 19 399 7.5E-108 T 09-03-2017 IPR019029 Type III secretion system, PrgH/EprH-like GO:0016021 NA29_RS10960 8e6bb06502164d15bf7cdcedd44a2725 400 SUPERFAMILY SSF103473 16 396 1.44E-28 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS10960 8e6bb06502164d15bf7cdcedd44a2725 400 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 28 390 2.2E-79 T 09-03-2017 IPR010645 Uncharacterised MFS-type transporter YbfB NA29_RS10960 8e6bb06502164d15bf7cdcedd44a2725 400 Gene3D G3DSA:1.20.1250.20 219 396 9.1E-5 T 09-03-2017 NA29_RS10960 8e6bb06502164d15bf7cdcedd44a2725 400 Gene3D G3DSA:1.20.1250.20 21 198 1.5E-11 T 09-03-2017 NA29_RS22295 0b6d3e5264fa2cbbe40912262111c46d 294 Pfam PF01578 Cytochrome C assembly protein 58 286 2.1E-24 T 09-03-2017 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 NA29_RS21815 0311620cd851f173d5b36647d8298b73 428 Pfam PF07690 Major Facilitator Superfamily 23 348 6.9E-34 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS21815 0311620cd851f173d5b36647d8298b73 428 Gene3D G3DSA:1.20.1250.20 15 205 5.5E-27 T 09-03-2017 NA29_RS21815 0311620cd851f173d5b36647d8298b73 428 Gene3D G3DSA:1.20.1250.20 236 422 1.7E-18 T 09-03-2017 NA29_RS21815 0311620cd851f173d5b36647d8298b73 428 SUPERFAMILY SSF103473 13 423 1.44E-56 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS01960 f7897b84b73d9c4790eea0b277b964c5 445 Gene3D G3DSA:3.30.70.270 244 415 5.2E-47 T 09-03-2017 NA29_RS01960 f7897b84b73d9c4790eea0b277b964c5 445 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 240 413 7.3E-45 T 09-03-2017 IPR000160 GGDEF domain NA29_RS01960 f7897b84b73d9c4790eea0b277b964c5 445 Pfam PF00990 Diguanylate cyclase, GGDEF domain 244 409 7.5E-38 T 09-03-2017 IPR000160 GGDEF domain NA29_RS01960 f7897b84b73d9c4790eea0b277b964c5 445 SMART SM00267 232 414 1.8E-43 T 09-03-2017 IPR000160 GGDEF domain NA29_RS01960 f7897b84b73d9c4790eea0b277b964c5 445 Pfam PF05230 MASE2 domain 71 161 3.6E-28 T 09-03-2017 IPR007894 MASE2 NA29_RS01960 f7897b84b73d9c4790eea0b277b964c5 445 SUPERFAMILY SSF55073 248 413 7.85E-41 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS15285 bfbc8886b9480fb4946a539aab0680e8 159 SUPERFAMILY SSF89872 40 152 8.11E-24 T 09-03-2017 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 NA29_RS15285 bfbc8886b9480fb4946a539aab0680e8 159 Gene3D G3DSA:3.40.1420.10 40 154 4.4E-27 T 09-03-2017 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 NA29_RS15285 bfbc8886b9480fb4946a539aab0680e8 159 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 47 156 4.9E-32 T 09-03-2017 NA29_RS13180 93c83cb5156fd2323dee869d21724873 211 Pfam PF01351 Ribonuclease HII 15 191 1.2E-38 T 09-03-2017 IPR024567 Ribonuclease HII/HIII domain NA29_RS13180 93c83cb5156fd2323dee869d21724873 211 Hamap MF_00052_B Ribonuclease HII [rnhB]. 13 192 38.224 T 09-03-2017 IPR022898 Ribonuclease HII GO:0004523 NA29_RS13180 93c83cb5156fd2323dee869d21724873 211 Gene3D G3DSA:3.30.420.10 13 153 3.4E-46 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS13180 93c83cb5156fd2323dee869d21724873 211 SUPERFAMILY SSF53098 13 197 7.44E-67 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 NA29_RS19480 9652ea2e75086dc21a476384f5db6de3 264 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 25 254 7.9E-42 T 09-03-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 NA29_RS19480 9652ea2e75086dc21a476384f5db6de3 264 SUPERFAMILY SSF51695 18 255 1.7E-63 T 09-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NA29_RS19480 9652ea2e75086dc21a476384f5db6de3 264 Gene3D G3DSA:3.20.20.190 9 256 1.4E-64 T 09-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 NA29_RS21555 bacd0cdcdff0108684a9f05fb88315e3 176 Pfam PF07273 Protein of unknown function (DUF1439) 25 151 2.4E-16 T 09-03-2017 IPR010835 Protein of unknown function DUF1439 NA29_RS08935 bd2f5406ff6af0e6fb128821f7d40996 128 Pfam PF05899 Protein of unknown function (DUF861) 45 119 8.3E-18 T 09-03-2017 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 NA29_RS08935 bd2f5406ff6af0e6fb128821f7d40996 128 SUPERFAMILY SSF51182 25 121 2.82E-19 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS08935 bd2f5406ff6af0e6fb128821f7d40996 128 Gene3D G3DSA:2.60.120.10 24 124 5.2E-29 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS12760 93b76a553a1cc64053483196bc44dca2 95 Gene3D G3DSA:1.10.10.10 16 91 7.5E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12760 93b76a553a1cc64053483196bc44dca2 95 Pfam PF09339 IclR helix-turn-helix domain 20 68 3.5E-9 T 09-03-2017 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 NA29_RS12760 93b76a553a1cc64053483196bc44dca2 95 SUPERFAMILY SSF46785 18 91 1.37E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS13350 33d99c3b515af121e14d1e4b3c65e71f 430 Gene3D G3DSA:1.20.1250.20 5 200 1.5E-12 T 09-03-2017 NA29_RS13350 33d99c3b515af121e14d1e4b3c65e71f 430 Pfam PF07690 Major Facilitator Superfamily 9 351 2.7E-17 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS13350 33d99c3b515af121e14d1e4b3c65e71f 430 SUPERFAMILY SSF103473 5 415 3.66E-23 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS18315 0e6115a51411450469a8fc74a8e26dfc 69 Pfam PF07311 Dodecin 5 68 5.6E-32 T 09-03-2017 IPR009923 Dodecin NA29_RS18315 0e6115a51411450469a8fc74a8e26dfc 69 Gene3D G3DSA:3.30.1660.10 3 69 8.8E-37 T 09-03-2017 IPR025543 Dodecin-like NA29_RS18315 0e6115a51411450469a8fc74a8e26dfc 69 SUPERFAMILY SSF89807 3 68 2.22E-27 T 09-03-2017 IPR009923 Dodecin NA29_RS14415 31cf3a885f9e5e8b07dcfc17a1106bcb 362 Gene3D G3DSA:1.10.260.40 30 71 2.7E-7 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS14415 31cf3a885f9e5e8b07dcfc17a1106bcb 362 Pfam PF13464 Domain of unknown function (DUF4115) 288 361 5.9E-24 T 09-03-2017 IPR025194 Domain of unknown function DUF4115 NA29_RS14415 31cf3a885f9e5e8b07dcfc17a1106bcb 362 Pfam PF13413 Helix-turn-helix domain 38 98 5.5E-20 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS14415 31cf3a885f9e5e8b07dcfc17a1106bcb 362 SMART SM00530 38 94 0.0036 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 NA29_RS14415 31cf3a885f9e5e8b07dcfc17a1106bcb 362 SUPERFAMILY SSF47413 34 72 1.63E-6 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS23670 6d0f00cbbdc88198a1bac9c742d954e0 363 Pfam PF11104 Type IV pilus assembly protein PilM; 32 213 1.8E-9 T 09-03-2017 IPR005883 Type IV pilus assembly protein PilM NA29_RS07595 9190dc8d3401d4f4bab14857d66243ee 140 Pfam PF07883 Cupin domain 55 117 2.6E-7 T 09-03-2017 IPR013096 Cupin 2, conserved barrel NA29_RS07595 9190dc8d3401d4f4bab14857d66243ee 140 SUPERFAMILY SSF51182 16 126 3.05E-20 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS07595 9190dc8d3401d4f4bab14857d66243ee 140 Gene3D G3DSA:2.60.120.10 22 125 5.3E-19 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS20255 9e1e9ad56329ca1b7249781ad6fc3a0f 285 SUPERFAMILY SSF161098 9 279 7.57E-58 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS20255 9e1e9ad56329ca1b7249781ad6fc3a0f 285 Gene3D G3DSA:1.10.3720.10 11 279 4.5E-55 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS20255 9e1e9ad56329ca1b7249781ad6fc3a0f 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 270 5.8E-12 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS23285 3d7891f311cce6cecc41e12bcc4b9264 170 Pfam PF04985 Phage tail tube protein FII 4 169 2.5E-58 T 09-03-2017 IPR006498 Tail tube protein NA29_RS23285 3d7891f311cce6cecc41e12bcc4b9264 170 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 170 4.3E-55 T 09-03-2017 IPR006498 Tail tube protein NA29_RS17370 b054bda91958a7e1a48d672215611694 464 Gene3D G3DSA:1.20.1250.20 263 460 6.5E-14 T 09-03-2017 NA29_RS17370 b054bda91958a7e1a48d672215611694 464 Gene3D G3DSA:1.20.1250.20 42 244 4.0E-32 T 09-03-2017 NA29_RS17370 b054bda91958a7e1a48d672215611694 464 Pfam PF07690 Major Facilitator Superfamily 52 415 1.9E-45 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS17370 b054bda91958a7e1a48d672215611694 464 SUPERFAMILY SSF103473 30 452 2.09E-65 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS12275 eef14d81d0e9f11999430311b4a9c29c 360 PIRSF PIRSF005508 4 360 1.6E-109 T 09-03-2017 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 NA29_RS12275 eef14d81d0e9f11999430311b4a9c29c 360 Pfam PF01758 Sodium Bile acid symporter family 66 259 1.3E-32 T 09-03-2017 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 NA29_RS12275 eef14d81d0e9f11999430311b4a9c29c 360 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 19 345 3.3E-104 T 09-03-2017 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 NA29_RS12100 a2f8e2bffc4bde9aa419755820ed4022 167 SUPERFAMILY SSF48695 36 69 3.59E-5 T 09-03-2017 IPR011031 Multihaem cytochrome NA29_RS10020 286fbcb06004ffcdc7e1a1e5564575e9 428 ProSitePatterns PS00216 Sugar transport proteins signature 1. 83 99 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS10020 286fbcb06004ffcdc7e1a1e5564575e9 428 Gene3D G3DSA:1.20.1250.20 22 222 4.7E-22 T 09-03-2017 NA29_RS10020 286fbcb06004ffcdc7e1a1e5564575e9 428 Gene3D G3DSA:1.20.1250.20 241 418 1.8E-20 T 09-03-2017 NA29_RS10020 286fbcb06004ffcdc7e1a1e5564575e9 428 Pfam PF07690 Major Facilitator Superfamily 55 295 4.4E-19 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS10020 286fbcb06004ffcdc7e1a1e5564575e9 428 SUPERFAMILY SSF103473 19 424 4.19E-62 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS25120 57bd177313593fb5f3b4fef582a23b29 256 SUPERFAMILY SSF52540 1 254 5.32E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS25120 57bd177313593fb5f3b4fef582a23b29 256 Pfam PF13614 AAA domain 3 178 3.3E-65 T 09-03-2017 IPR025669 AAA domain NA29_RS25120 57bd177313593fb5f3b4fef582a23b29 256 Gene3D G3DSA:3.40.50.300 3 254 8.9E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS23155 b1759fe8d0d9b511ed7e20a87deb25cb 350 SMART SM00901 56 191 1.8E-22 T 09-03-2017 IPR014966 FRG domain NA29_RS23155 b1759fe8d0d9b511ed7e20a87deb25cb 350 Pfam PF08867 FRG domain 59 187 4.2E-21 T 09-03-2017 IPR014966 FRG domain NA29_RS21040 21cc07af51f4ace5c817c4257249f19d 487 Pfam PF02646 RmuC family 183 472 2.0E-79 T 09-03-2017 IPR003798 DNA recombination RmuC NA29_RS13880 1df4c838279f2931e0c476761a631516 339 Pfam PF12833 Helix-turn-helix domain 243 320 7.4E-18 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS13880 1df4c838279f2931e0c476761a631516 339 Gene3D G3DSA:1.10.10.60 274 322 7.1E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS13880 1df4c838279f2931e0c476761a631516 339 Gene3D G3DSA:1.10.10.60 226 273 6.6E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS13880 1df4c838279f2931e0c476761a631516 339 SUPERFAMILY SSF46689 272 321 5.38E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS13880 1df4c838279f2931e0c476761a631516 339 SMART SM00342 236 318 4.1E-23 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS13880 1df4c838279f2931e0c476761a631516 339 Pfam PF12852 Cupin 18 204 2.8E-28 T 09-03-2017 IPR032783 AraC-type transcription regulator, ligand-binding domain NA29_RS13495 2aa7dd7316ce945b2796c265b943b4f0 569 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 75 236 2.1E-19 T 09-03-2017 NA29_RS13705 dccfd9167b76e96079da551348d27ae9 518 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 498 4.1E-163 T 09-03-2017 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 NA29_RS13705 dccfd9167b76e96079da551348d27ae9 518 SUPERFAMILY SSF103473 477 502 7.59E-69 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS13705 dccfd9167b76e96079da551348d27ae9 518 SUPERFAMILY SSF103473 7 201 7.59E-69 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS13705 dccfd9167b76e96079da551348d27ae9 518 SUPERFAMILY SSF103473 254 425 7.59E-69 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS13705 dccfd9167b76e96079da551348d27ae9 518 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 238 366 0.008 T 09-03-2017 NA29_RS13705 dccfd9167b76e96079da551348d27ae9 518 Pfam PF07690 Major Facilitator Superfamily 22 415 1.1E-54 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS13705 dccfd9167b76e96079da551348d27ae9 518 Gene3D G3DSA:1.20.1250.20 478 502 2.0E-18 T 09-03-2017 NA29_RS13705 dccfd9167b76e96079da551348d27ae9 518 Gene3D G3DSA:1.20.1250.20 273 427 2.0E-18 T 09-03-2017 NA29_RS13705 dccfd9167b76e96079da551348d27ae9 518 Gene3D G3DSA:1.20.1250.20 19 200 7.3E-31 T 09-03-2017 NA29_RS24430 c8fbe6d114b518e2c874383a0515f3b3 218 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 159 1.5E-6 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS24430 c8fbe6d114b518e2c874383a0515f3b3 218 SUPERFAMILY SSF51161 56 179 1.83E-28 T 09-03-2017 IPR011004 Trimeric LpxA-like NA29_RS24430 c8fbe6d114b518e2c874383a0515f3b3 218 Gene3D G3DSA:2.160.10.10 37 180 5.8E-30 T 09-03-2017 NA29_RS24430 c8fbe6d114b518e2c874383a0515f3b3 218 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 60 85 0.039 T 09-03-2017 IPR001451 Hexapeptide repeat NA29_RS24005 7a98d843ba702cc7781ac682fb990731 1043 Gene3D G3DSA:1.10.3290.10 591 654 7.8E-9 T 09-03-2017 IPR003812 Fido domain NA29_RS24005 7a98d843ba702cc7781ac682fb990731 1043 Gene3D G3DSA:1.10.3290.10 690 776 7.8E-9 T 09-03-2017 IPR003812 Fido domain NA29_RS24005 7a98d843ba702cc7781ac682fb990731 1043 Pfam PF02661 Fic/DOC family 677 758 5.7E-5 T 09-03-2017 IPR003812 Fido domain NA29_RS24005 7a98d843ba702cc7781ac682fb990731 1043 SUPERFAMILY SSF140931 725 765 8.5E-6 T 09-03-2017 IPR003812 Fido domain NA29_RS20555 04c93af1bdff366b2346620f96df1826 317 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 40 315 3.9E-84 T 09-03-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NA29_RS20555 04c93af1bdff366b2346620f96df1826 317 Pfam PF01545 Cation efflux family 45 234 5.6E-45 T 09-03-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 NA29_RS20555 04c93af1bdff366b2346620f96df1826 317 SUPERFAMILY SSF161111 40 235 5.36E-55 T 09-03-2017 NA29_RS20555 04c93af1bdff366b2346620f96df1826 317 Gene3D G3DSA:1.20.1510.10 40 234 4.7E-59 T 09-03-2017 IPR027469 Cation efflux protein transmembrane domain NA29_RS20555 04c93af1bdff366b2346620f96df1826 317 SUPERFAMILY SSF160240 249 312 4.71E-7 T 09-03-2017 NA29_RS07085 3c846601a465cf24ffd4677ae99bd58d 192 SUPERFAMILY SSF56235 65 179 1.25E-7 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS07085 3c846601a465cf24ffd4677ae99bd58d 192 Gene3D G3DSA:3.60.20.10 67 179 1.3E-9 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS19180 d8c9d97993ddd067a1059de459a8deab 169 Gene3D G3DSA:2.30.110.10 10 164 3.5E-48 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS19180 d8c9d97993ddd067a1059de459a8deab 169 SUPERFAMILY SSF50475 10 163 1.6E-44 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 NA29_RS19180 d8c9d97993ddd067a1059de459a8deab 169 Pfam PF01613 Flavin reductase like domain 15 163 1.2E-32 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS19180 d8c9d97993ddd067a1059de459a8deab 169 SMART SM00903 15 162 1.0E-46 T 09-03-2017 IPR002563 Flavin reductase like domain GO:0010181 NA29_RS11275 3d5e5ccd828bc6b4cbfd316c55577cca 349 Gene3D G3DSA:2.40.160.10 26 349 5.8E-64 T 09-03-2017 IPR023614 Porin domain NA29_RS11275 3d5e5ccd828bc6b4cbfd316c55577cca 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 293 310 3.5E-7 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS11275 3d5e5ccd828bc6b4cbfd316c55577cca 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 179 191 3.5E-7 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS11275 3d5e5ccd828bc6b4cbfd316c55577cca 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 3.5E-7 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS11275 3d5e5ccd828bc6b4cbfd316c55577cca 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 3.5E-7 T 09-03-2017 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 NA29_RS11275 3d5e5ccd828bc6b4cbfd316c55577cca 349 PRINTS PR00184 Neisseria sp. porin signature 180 197 1.3E-9 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS11275 3d5e5ccd828bc6b4cbfd316c55577cca 349 PRINTS PR00184 Neisseria sp. porin signature 290 314 1.3E-9 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS11275 3d5e5ccd828bc6b4cbfd316c55577cca 349 PRINTS PR00184 Neisseria sp. porin signature 57 82 1.3E-9 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS11275 3d5e5ccd828bc6b4cbfd316c55577cca 349 PRINTS PR00184 Neisseria sp. porin signature 93 112 1.3E-9 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS11275 3d5e5ccd828bc6b4cbfd316c55577cca 349 PRINTS PR00184 Neisseria sp. porin signature 151 168 1.3E-9 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS11275 3d5e5ccd828bc6b4cbfd316c55577cca 349 SUPERFAMILY SSF56935 25 349 1.96E-60 T 09-03-2017 NA29_RS11275 3d5e5ccd828bc6b4cbfd316c55577cca 349 Pfam PF13609 Gram-negative porin 10 318 1.7E-39 T 09-03-2017 NA29_RS09820 b4e96e84873ab2654bb53d7564f039b1 66 Pfam PF04964 Flp/Fap pilin component 18 59 8.1E-10 T 09-03-2017 IPR007047 Flp/Fap pilin component NA29_RS08955 07afd8983a5265d149ec5a40c2ffd40d 30 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 28 2.6E-8 T 09-03-2017 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 NA29_RS08955 07afd8983a5265d149ec5a40c2ffd40d 30 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 28 2.5E-9 T 09-03-2017 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 NA29_RS23185 df715db31f9cb0fb90ec1de8f8d47679 228 Pfam PF05944 Phage small terminase subunit 37 166 3.4E-44 T 09-03-2017 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 NA29_RS00420 2d55ccf63c2a57739d9d5569dd44f627 429 Gene3D G3DSA:1.20.1250.20 15 208 1.3E-25 T 09-03-2017 NA29_RS00420 2d55ccf63c2a57739d9d5569dd44f627 429 Gene3D G3DSA:1.20.1250.20 229 422 2.1E-15 T 09-03-2017 NA29_RS00420 2d55ccf63c2a57739d9d5569dd44f627 429 SUPERFAMILY SSF103473 5 427 8.63E-53 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS00420 2d55ccf63c2a57739d9d5569dd44f627 429 Pfam PF07690 Major Facilitator Superfamily 31 317 7.0E-33 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS02840 e9e056dda58dd48cf5fcd30e59d8f4ed 161 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 19 160 1.8E-45 T 09-03-2017 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 NA29_RS02840 e9e056dda58dd48cf5fcd30e59d8f4ed 161 Pfam PF06754 Phosphonate metabolism protein PhnG 20 159 7.8E-47 T 09-03-2017 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 NA29_RS10440 5b8de0150f57b9a44b891e0a733c8387 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 259 1.9E-30 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS15560 2008689d9412d3d68fcb29fa337cfe89 300 Gene3D G3DSA:1.10.3430.10 15 290 1.2E-34 T 09-03-2017 IPR029020 Ammonium/urea transporter NA29_RS15560 2008689d9412d3d68fcb29fa337cfe89 300 Pfam PF03253 Urea transporter 21 287 2.2E-31 T 09-03-2017 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 NA29_RS22510 9c220a48d489cdad788b41a874b7defd 159 SUPERFAMILY SSF46785 19 156 1.9E-30 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS22510 9c220a48d489cdad788b41a874b7defd 159 ProSitePatterns PS01117 MarR-type HTH domain signature. 83 117 - T 09-03-2017 IPR023187 Transcriptional regulator MarR-type, conserved site NA29_RS22510 9c220a48d489cdad788b41a874b7defd 159 Gene3D G3DSA:1.10.10.10 15 156 2.9E-38 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS22510 9c220a48d489cdad788b41a874b7defd 159 SMART SM00347 43 144 7.8E-25 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS22510 9c220a48d489cdad788b41a874b7defd 159 Pfam PF01047 MarR family 51 108 2.1E-14 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS22510 9c220a48d489cdad788b41a874b7defd 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 134 154 8.5E-12 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS22510 9c220a48d489cdad788b41a874b7defd 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 100 8.5E-12 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS22510 9c220a48d489cdad788b41a874b7defd 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 84 8.5E-12 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS22510 9c220a48d489cdad788b41a874b7defd 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 104 120 8.5E-12 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 NA29_RS15640 bd4ff78968a87cc48fca939d11f892ac 479 Pfam PF00990 Diguanylate cyclase, GGDEF domain 290 451 1.5E-44 T 09-03-2017 IPR000160 GGDEF domain NA29_RS15640 bd4ff78968a87cc48fca939d11f892ac 479 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 288 455 1.7E-48 T 09-03-2017 IPR000160 GGDEF domain NA29_RS15640 bd4ff78968a87cc48fca939d11f892ac 479 SMART SM00267 278 455 2.1E-60 T 09-03-2017 IPR000160 GGDEF domain NA29_RS15640 bd4ff78968a87cc48fca939d11f892ac 479 SUPERFAMILY SSF55073 294 454 1.33E-45 T 09-03-2017 IPR029787 Nucleotide cyclase NA29_RS15640 bd4ff78968a87cc48fca939d11f892ac 479 Pfam PF17158 Membrane-associated sensor, integral membrane domain 42 275 1.2E-30 T 09-03-2017 IPR033424 Membrane-associated sensor domain NA29_RS15640 bd4ff78968a87cc48fca939d11f892ac 479 Gene3D G3DSA:3.30.70.270 291 456 2.9E-52 T 09-03-2017 NA29_RS23035 fc0e0b10434fd4d75a1cf9b63477ca9f 430 Gene3D G3DSA:1.20.1250.20 233 421 2.2E-15 T 09-03-2017 NA29_RS23035 fc0e0b10434fd4d75a1cf9b63477ca9f 430 SUPERFAMILY SSF103473 4 422 1.16E-79 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS23035 fc0e0b10434fd4d75a1cf9b63477ca9f 430 Pfam PF07690 Major Facilitator Superfamily 19 382 3.6E-44 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS23035 fc0e0b10434fd4d75a1cf9b63477ca9f 430 Gene3D G3DSA:1.20.1250.20 5 210 4.9E-45 T 09-03-2017 NA29_RS20985 6a481daec7f9ac1b7452b8afee2c1208 350 Pfam PF01343 Peptidase family S49 163 305 1.4E-35 T 09-03-2017 IPR002142 Peptidase S49 GO:0006508|GO:0008233 NA29_RS20985 6a481daec7f9ac1b7452b8afee2c1208 350 Gene3D G3DSA:3.90.226.10 239 323 5.0E-46 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS20985 6a481daec7f9ac1b7452b8afee2c1208 350 Gene3D G3DSA:3.90.226.10 63 201 5.0E-46 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS20985 6a481daec7f9ac1b7452b8afee2c1208 350 SUPERFAMILY SSF52096 238 299 2.32E-42 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS20985 6a481daec7f9ac1b7452b8afee2c1208 350 SUPERFAMILY SSF52096 95 209 2.32E-42 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS07815 0fd3f8a02648bfc4706c7c2d58b1b90a 205 Gene3D G3DSA:3.40.50.850 6 203 2.4E-46 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS07815 0fd3f8a02648bfc4706c7c2d58b1b90a 205 Pfam PF00857 Isochorismatase family 12 195 1.4E-35 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS07815 0fd3f8a02648bfc4706c7c2d58b1b90a 205 SUPERFAMILY SSF52499 6 201 1.02E-43 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 NA29_RS07580 18d2391040363e445f5c8165f0b69e84 343 Gene3D G3DSA:3.40.190.10 130 253 2.5E-5 T 09-03-2017 NA29_RS07580 18d2391040363e445f5c8165f0b69e84 343 SUPERFAMILY SSF53850 46 269 4.45E-28 T 09-03-2017 NA29_RS07580 18d2391040363e445f5c8165f0b69e84 343 Pfam PF09084 NMT1/THI5 like 50 264 3.6E-41 T 09-03-2017 IPR015168 SsuA/THI5-like NA29_RS08665 46d4a01101570960859bec358ab38590 439 Pfam PF13458 Periplasmic binding protein 29 399 3.8E-72 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS08665 46d4a01101570960859bec358ab38590 439 SUPERFAMILY SSF53822 32 405 1.95E-49 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS08665 46d4a01101570960859bec358ab38590 439 Gene3D G3DSA:3.40.50.2300 313 363 9.6E-8 T 09-03-2017 NA29_RS08665 46d4a01101570960859bec358ab38590 439 Gene3D G3DSA:3.40.50.2300 31 154 9.6E-8 T 09-03-2017 NA29_RS08665 46d4a01101570960859bec358ab38590 439 Gene3D G3DSA:3.40.50.2300 155 312 4.3E-16 T 09-03-2017 NA29_RS16335 ec6cf1f993157eafb8a7de11429ae80a 554 Pfam PF02470 MlaD protein 60 150 5.0E-13 T 09-03-2017 IPR003399 Mce/MlaD NA29_RS16335 ec6cf1f993157eafb8a7de11429ae80a 554 Pfam PF02470 MlaD protein 175 235 7.2E-8 T 09-03-2017 IPR003399 Mce/MlaD NA29_RS16335 ec6cf1f993157eafb8a7de11429ae80a 554 Pfam PF02470 MlaD protein 303 408 2.6E-16 T 09-03-2017 IPR003399 Mce/MlaD NA29_RS21765 c7b65cefaa5574f6eeb17ffd7d33f907 356 Pfam PF01594 Domain of unknown function DUF20 14 342 1.1E-51 T 09-03-2017 IPR002549 Transmembrane protein TqsA-like NA29_RS02145 041cc70ff9f1d94b69565a5822153a2a 373 Pfam PF11306 Protein of unknown function (DUF3108) 150 360 4.3E-20 T 09-03-2017 IPR021457 Protein of unknown function DUF3108 NA29_RS18695 374b54d480e74acff726ffbdade172e0 332 Gene3D G3DSA:3.20.20.100 2 319 1.1E-110 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain NA29_RS18695 374b54d480e74acff726ffbdade172e0 332 SUPERFAMILY SSF51430 3 308 1.83E-99 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain NA29_RS18695 374b54d480e74acff726ffbdade172e0 332 Pfam PF00248 Aldo/keto reductase family 17 308 4.0E-73 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain NA29_RS16735 2b55b760716a30290bf58064f1686491 400 Pfam PF00909 Ammonium Transporter Family 12 392 3.0E-87 T 09-03-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 NA29_RS16735 2b55b760716a30290bf58064f1686491 400 Gene3D G3DSA:1.10.3430.10 5 374 7.4E-94 T 09-03-2017 IPR029020 Ammonium/urea transporter NA29_RS16735 2b55b760716a30290bf58064f1686491 400 SUPERFAMILY SSF111352 7 374 2.88E-94 T 09-03-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 NA29_RS09235 e68e6e1299ca25d4e9fca96da02bf7d9 117 Pfam PF09842 Predicted membrane protein (DUF2069) 5 105 3.8E-34 T 09-03-2017 IPR018643 Protein of unknown function DUF2069, membrane NA29_RS05140 6f5ea7bfc5a28540e7bcf363b29c3f35 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 8.4E-29 T 09-03-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 NA29_RS22095 82eb5eff419c3eb6fbc1db0e18a10e4c 287 Pfam PF02706 Chain length determinant protein 16 151 4.0E-5 T 09-03-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 NA29_RS17780 6889d65b9111bd8e4e9f8f6a104c1143 268 Pfam PF12836 Helix-hairpin-helix motif 22 78 3.2E-14 T 09-03-2017 NA29_RS17780 6889d65b9111bd8e4e9f8f6a104c1143 268 SUPERFAMILY SSF47781 22 80 1.33E-18 T 09-03-2017 IPR010994 RuvA domain 2-like NA29_RS17780 6889d65b9111bd8e4e9f8f6a104c1143 268 Gene3D G3DSA:1.10.150.280 18 83 3.1E-17 T 09-03-2017 NA29_RS13715 a4b99f376a6ec28903daface8f06150b 240 Pfam PF03591 AzlC protein 26 168 6.8E-36 T 09-03-2017 IPR011606 Branched-chain amino acid transport, permease NA29_RS19980 36ad3b293e7b9294954ca5ad3863b13e 104 Gene3D G3DSA:2.102.10.10 2 104 1.4E-33 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS19980 36ad3b293e7b9294954ca5ad3863b13e 104 Pfam PF00355 Rieske [2Fe-2S] domain 4 91 9.2E-19 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS19980 36ad3b293e7b9294954ca5ad3863b13e 104 SUPERFAMILY SSF50022 3 103 3.4E-32 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS06310 5ffa9e8ee11372809292f5d8712d4fae 285 SUPERFAMILY SSF103481 58 134 6.67E-6 T 09-03-2017 NA29_RS06310 5ffa9e8ee11372809292f5d8712d4fae 285 SUPERFAMILY SSF103481 179 275 1.83E-16 T 09-03-2017 NA29_RS06310 5ffa9e8ee11372809292f5d8712d4fae 285 Pfam PF00892 EamA-like transporter family 146 273 3.2E-21 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS12550 7c8c2ecbde73735676bcd21ebd001d2d 348 Pfam PF11740 Plasmid replication region DNA-binding N-term 25 151 5.6E-27 T 09-03-2017 IPR021104 KfrA, N-terminal DNA-binding domain NA29_RS07275 b3ef007814e561d22660921f7bc7fc58 216 Gene3D G3DSA:3.40.50.150 3 214 3.7E-72 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS07275 b3ef007814e561d22660921f7bc7fc58 216 SUPERFAMILY SSF53335 27 213 2.46E-36 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS07275 b3ef007814e561d22660921f7bc7fc58 216 PIRSF PIRSF005461 1 216 3.4E-70 T 09-03-2017 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 NA29_RS07275 b3ef007814e561d22660921f7bc7fc58 216 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 212 32.178 T 09-03-2017 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 NA29_RS07275 b3ef007814e561d22660921f7bc7fc58 216 Pfam PF01728 FtsJ-like methyltransferase 28 211 7.2E-53 T 09-03-2017 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 NA29_RS14815 eb8eec29e249f728b41fc87c160af342 42 Pfam PF08085 Entericidin EcnA/B family 20 40 3.6E-9 T 09-03-2017 IPR012556 Entericidin A/B GO:0009636|GO:0016020 NA29_RS02585 cf160fc7721aafe5ebebc0b6e82afe55 38 Pfam PF08173 Membrane bound YbgT-like protein 1 26 1.1E-14 T 09-03-2017 IPR012994 Membrane bound YbgT-like NA29_RS02585 cf160fc7721aafe5ebebc0b6e82afe55 38 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 4.1E-17 T 09-03-2017 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 NA29_RS19065 57eb3ce21f5495585f4d957acd85c3a4 242 SUPERFAMILY SSF56935 42 227 1.83E-7 T 09-03-2017 NA29_RS19065 57eb3ce21f5495585f4d957acd85c3a4 242 Pfam PF13557 Putative MetA-pathway of phenol degradation 24 241 2.6E-15 T 09-03-2017 IPR025737 MetA-pathway of phenol degradation, putative NA29_RS20495 be22a4756f30fc77b03e835692c23127 207 Pfam PF10634 Fe2+ transport protein 20 200 8.6E-65 T 09-03-2017 IPR018470 Periplasmic metal-binding protein Tp34-type NA29_RS02320 d0b072ed97fd50ff62a8baea955e698c 322 Pfam PF13379 NMT1-like family 39 246 5.6E-23 T 09-03-2017 NA29_RS02320 d0b072ed97fd50ff62a8baea955e698c 322 SMART SM00062 28 252 0.0076 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF NA29_RS02320 d0b072ed97fd50ff62a8baea955e698c 322 Gene3D G3DSA:3.40.190.10 100 230 1.1E-24 T 09-03-2017 NA29_RS02320 d0b072ed97fd50ff62a8baea955e698c 322 SUPERFAMILY SSF53850 36 256 2.86E-42 T 09-03-2017 NA29_RS05505 7ff0296bdf7fa1e44e4def07eea2f3c2 403 SUPERFAMILY SSF103473 3 397 9.42E-54 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS05505 7ff0296bdf7fa1e44e4def07eea2f3c2 403 Pfam PF07690 Major Facilitator Superfamily 12 347 3.1E-34 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS05505 7ff0296bdf7fa1e44e4def07eea2f3c2 403 Gene3D G3DSA:1.20.1250.20 6 190 1.8E-32 T 09-03-2017 NA29_RS05505 7ff0296bdf7fa1e44e4def07eea2f3c2 403 Gene3D G3DSA:1.20.1250.20 206 391 9.7E-7 T 09-03-2017 NA29_RS23790 649e44cedec7920d4f4f44554ed1e268 121 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 121 1.1E-35 T 09-03-2017 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 NA29_RS23790 649e44cedec7920d4f4f44554ed1e268 121 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 121 1.3E-34 T 09-03-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS23790 649e44cedec7920d4f4f44554ed1e268 121 Gene3D G3DSA:3.30.420.100 21 121 1.3E-34 T 09-03-2017 NA29_RS23790 649e44cedec7920d4f4f44554ed1e268 121 SUPERFAMILY SSF53137 3 119 5.89E-48 T 09-03-2017 NA29_RS23790 649e44cedec7920d4f4f44554ed1e268 121 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 121 25.797 T 09-03-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 NA29_RS18975 5be8bd11886b1015b6dd910a45a9e128 255 Pfam PF02104 SURF1 family 8 236 5.2E-43 T 09-03-2017 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS01005 58baaf4f374489c465db7b8338c8dd4c 171 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 94 167 4.2E-21 T 09-03-2017 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal NA29_RS12970 25a1bfe9014bf935bce18cfedb94b116 314 Gene3D G3DSA:3.20.20.370 9 310 1.0E-104 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 NA29_RS12970 25a1bfe9014bf935bce18cfedb94b116 314 SUPERFAMILY SSF88713 10 311 7.79E-91 T 09-03-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NA29_RS12970 25a1bfe9014bf935bce18cfedb94b116 314 Pfam PF01522 Polysaccharide deacetylase 81 188 7.9E-12 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 NA29_RS12970 25a1bfe9014bf935bce18cfedb94b116 314 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 11 310 1.3E-163 T 09-03-2017 IPR017625 Putative urate catabolism protein NA29_RS15605 d40a70c0bc2161939817d20dd496707e 204 Gene3D G3DSA:3.20.19.10 24 159 1.1E-18 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS15605 d40a70c0bc2161939817d20dd496707e 204 Pfam PF00694 Aconitase C-terminal domain 39 142 8.4E-12 T 09-03-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS15605 d40a70c0bc2161939817d20dd496707e 204 SUPERFAMILY SSF52016 35 187 1.92E-22 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS20785 b549bd84f9f195677aeccfafd9965002 141 Gene3D G3DSA:1.20.120.550 8 139 6.1E-20 T 09-03-2017 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain NA29_RS20785 b549bd84f9f195677aeccfafd9965002 141 Pfam PF01124 MAPEG family 13 137 7.3E-20 T 09-03-2017 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein NA29_RS20785 b549bd84f9f195677aeccfafd9965002 141 SUPERFAMILY SSF161084 4 132 2.49E-26 T 09-03-2017 NA29_RS19685 81ddf904f720983943a5a20dd7e31c6c 148 Pfam PF04143 Sulphur transport 8 132 1.0E-7 T 09-03-2017 IPR007272 Sulphur transport domain NA29_RS15170 59c5c64d23decabfbb496a610069c827 277 Pfam PF02811 PHP domain 5 72 9.2E-7 T 09-03-2017 IPR004013 PHP domain GO:0003824 NA29_RS15170 59c5c64d23decabfbb496a610069c827 277 SMART SM00481 4 69 5.8E-13 T 09-03-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 NA29_RS15170 59c5c64d23decabfbb496a610069c827 277 Gene3D G3DSA:3.20.20.140 2 87 1.2E-42 T 09-03-2017 NA29_RS15170 59c5c64d23decabfbb496a610069c827 277 Gene3D G3DSA:3.20.20.140 157 255 1.2E-42 T 09-03-2017 NA29_RS15170 59c5c64d23decabfbb496a610069c827 277 SUPERFAMILY SSF89550 165 276 1.82E-50 T 09-03-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 NA29_RS15170 59c5c64d23decabfbb496a610069c827 277 SUPERFAMILY SSF89550 1 82 1.82E-50 T 09-03-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 NA29_RS15795 30b5e813c6e66b68391726973b74db09 199 Pfam PF01810 LysE type translocator 15 190 3.0E-20 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS05055 d8f117aad46ba2c52197bd60248d2af1 325 SUPERFAMILY SSF88713 26 312 7.28E-50 T 09-03-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NA29_RS05055 d8f117aad46ba2c52197bd60248d2af1 325 Pfam PF01522 Polysaccharide deacetylase 89 195 1.8E-5 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 NA29_RS05055 d8f117aad46ba2c52197bd60248d2af1 325 Gene3D G3DSA:3.20.20.370 26 313 6.0E-64 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 NA29_RS21315 e3eed7b62113aa53e85f58818448329c 155 SUPERFAMILY SSF51182 59 146 1.1E-21 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS21315 e3eed7b62113aa53e85f58818448329c 155 Pfam PF07883 Cupin domain 79 141 5.1E-16 T 09-03-2017 IPR013096 Cupin 2, conserved barrel NA29_RS21315 e3eed7b62113aa53e85f58818448329c 155 Gene3D G3DSA:2.60.120.10 77 147 1.0E-19 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS25265 21ad2975cd2d9d6fb5925695dc53449d 390 Gene3D G3DSA:1.10.3470.10 46 386 2.6E-104 T 09-03-2017 IPR029022 ABC transporter, BtuC-like NA29_RS25265 21ad2975cd2d9d6fb5925695dc53449d 390 SUPERFAMILY SSF81345 44 384 1.57E-77 T 09-03-2017 IPR029022 ABC transporter, BtuC-like NA29_RS25265 21ad2975cd2d9d6fb5925695dc53449d 390 Pfam PF01032 FecCD transport family 59 383 3.6E-88 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 NA29_RS10715 26dbfa9923da695ad537a82132d7aef6 69 Gene3D G3DSA:1.10.287.70 9 65 1.3E-5 T 09-03-2017 NA29_RS10715 26dbfa9923da695ad537a82132d7aef6 69 Pfam PF11177 Protein of unknown function (DUF2964) 3 60 6.9E-28 T 09-03-2017 IPR021347 Protein of unknown function DUF2964 NA29_RS05485 8cb8d982a5e890a1b3bb6b45b313ab4f 127 Gene3D G3DSA:1.20.1290.10 2 122 1.9E-27 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS05485 8cb8d982a5e890a1b3bb6b45b313ab4f 127 SUPERFAMILY SSF69118 4 121 2.09E-38 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 NA29_RS05485 8cb8d982a5e890a1b3bb6b45b313ab4f 127 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 1.3E-24 T 09-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 NA29_RS15250 991c56494ed6b04fa6e3fb5af524441f 565 Pfam PF02272 DHHA1 domain 380 447 4.7E-16 T 09-03-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 NA29_RS15250 991c56494ed6b04fa6e3fb5af524441f 565 Pfam PF01368 DHH family 75 203 5.4E-9 T 09-03-2017 IPR001667 DDH domain NA29_RS15250 991c56494ed6b04fa6e3fb5af524441f 565 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 561 1.3E-137 T 09-03-2017 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 NA29_RS15250 991c56494ed6b04fa6e3fb5af524441f 565 SUPERFAMILY SSF64182 48 463 2.62E-115 T 09-03-2017 NA29_RS13510 8a67417ef04f3470f41dae2412b99e21 344 Pfam PF00535 Glycosyl transferase family 2 7 156 9.2E-28 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 NA29_RS13510 8a67417ef04f3470f41dae2412b99e21 344 Gene3D G3DSA:3.90.550.10 1 143 1.3E-21 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS13510 8a67417ef04f3470f41dae2412b99e21 344 SUPERFAMILY SSF53448 1 207 1.43E-34 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS25340 fda984c0c40f18a3effb80dc3c30df17 566 Pfam PF00654 Voltage gated chloride channel 70 410 1.1E-87 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS25340 fda984c0c40f18a3effb80dc3c30df17 566 SUPERFAMILY SSF81340 4 427 8.24E-103 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 NA29_RS25340 fda984c0c40f18a3effb80dc3c30df17 566 SUPERFAMILY SSF54631 441 562 3.68E-9 T 09-03-2017 NA29_RS25340 fda984c0c40f18a3effb80dc3c30df17 566 PRINTS PR00762 Chloride channel signature 379 398 5.4E-26 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS25340 fda984c0c40f18a3effb80dc3c30df17 566 PRINTS PR00762 Chloride channel signature 112 131 5.4E-26 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS25340 fda984c0c40f18a3effb80dc3c30df17 566 PRINTS PR00762 Chloride channel signature 326 346 5.4E-26 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS25340 fda984c0c40f18a3effb80dc3c30df17 566 PRINTS PR00762 Chloride channel signature 361 377 5.4E-26 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS25340 fda984c0c40f18a3effb80dc3c30df17 566 PRINTS PR00762 Chloride channel signature 163 182 5.4E-26 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 NA29_RS25340 fda984c0c40f18a3effb80dc3c30df17 566 Gene3D G3DSA:3.10.580.10 452 559 0.001 T 09-03-2017 NA29_RS25340 fda984c0c40f18a3effb80dc3c30df17 566 Gene3D G3DSA:1.10.3080.10 14 426 5.1E-88 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 NA29_RS17130 94171e2039c5599b194eb1af8376ae75 151 Pfam PF08670 MEKHLA domain 9 146 5.5E-49 T 09-03-2017 IPR013978 MEKHLA NA29_RS17130 94171e2039c5599b194eb1af8376ae75 151 SUPERFAMILY SSF55785 32 144 1.01E-10 T 09-03-2017 IPR000014 PAS domain NA29_RS17130 94171e2039c5599b194eb1af8376ae75 151 Gene3D G3DSA:3.30.450.20 32 144 1.9E-6 T 09-03-2017 NA29_RS04510 8c791c146d983f70808b39e40a798ebc 276 Pfam PF13230 Glutamine amidotransferases class-II 1 265 8.9E-126 T 09-03-2017 IPR026869 Putative glutamine amidotransferase type 2 NA29_RS04510 8c791c146d983f70808b39e40a798ebc 276 Gene3D G3DSA:3.60.20.10 1 252 5.4E-67 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS04510 8c791c146d983f70808b39e40a798ebc 276 SUPERFAMILY SSF56235 2 251 6.64E-47 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS02440 ae5e2cd4f98bafa6f597ed81abc5f474 135 SMART SM00450 35 132 7.1E-25 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS02440 ae5e2cd4f98bafa6f597ed81abc5f474 135 SUPERFAMILY SSF52821 13 135 8.87E-35 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS02440 ae5e2cd4f98bafa6f597ed81abc5f474 135 Gene3D G3DSA:3.40.250.10 16 134 3.8E-31 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS02440 ae5e2cd4f98bafa6f597ed81abc5f474 135 Pfam PF00581 Rhodanese-like domain 39 129 4.9E-18 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS17615 365153676e80430c3c1edd30f523aae6 178 Pfam PF04355 SmpA / OmlA family 102 131 1.2E-6 T 09-03-2017 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 NA29_RS14180 87bd57f766574df1de6c7f1774478acc 508 Pfam PF06742 Protein of unknown function (DUF1214) 386 492 3.9E-29 T 09-03-2017 IPR010621 Domain of unknown function DUF1214 NA29_RS14180 87bd57f766574df1de6c7f1774478acc 508 SUPERFAMILY SSF160935 35 506 2.62E-126 T 09-03-2017 NA29_RS14180 87bd57f766574df1de6c7f1774478acc 508 Gene3D G3DSA:1.10.3360.10 238 323 6.5E-28 T 09-03-2017 IPR023289 VPA0735-like domain NA29_RS14180 87bd57f766574df1de6c7f1774478acc 508 Gene3D G3DSA:2.60.120.600 334 507 4.8E-55 T 09-03-2017 IPR010621 Domain of unknown function DUF1214 NA29_RS14180 87bd57f766574df1de6c7f1774478acc 508 Gene3D G3DSA:2.60.40.1610 91 237 1.4E-48 T 09-03-2017 IPR010679 Domain of unknown function DUF1254 NA29_RS14180 87bd57f766574df1de6c7f1774478acc 508 Pfam PF06863 Protein of unknown function (DUF1254) 92 232 3.5E-26 T 09-03-2017 IPR010679 Domain of unknown function DUF1254 NA29_RS03885 4f7bd7d9695e611a1088b1f3ea9fe83a 254 Pfam PF01925 Sulfite exporter TauE/SafE 13 244 1.8E-17 T 09-03-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 NA29_RS19055 afcf210534b5046392d9b74ca7a98094 336 Hamap MF_01497 Stress response kinase A [srkA]. 12 329 47.465 T 09-03-2017 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 NA29_RS19055 afcf210534b5046392d9b74ca7a98094 336 Pfam PF01636 Phosphotransferase enzyme family 44 273 1.7E-35 T 09-03-2017 IPR002575 Aminoglycoside phosphotransferase NA29_RS19055 afcf210534b5046392d9b74ca7a98094 336 Gene3D G3DSA:3.90.1200.10 114 333 1.4E-52 T 09-03-2017 NA29_RS19055 afcf210534b5046392d9b74ca7a98094 336 SUPERFAMILY SSF56112 14 333 1.05E-81 T 09-03-2017 IPR011009 Protein kinase-like domain NA29_RS16945 16e538ef5831081b4c731a1607e7676f 300 Pfam PF00892 EamA-like transporter family 6 137 4.6E-21 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS16945 16e538ef5831081b4c731a1607e7676f 300 Pfam PF00892 EamA-like transporter family 151 284 8.0E-14 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS16945 16e538ef5831081b4c731a1607e7676f 300 SUPERFAMILY SSF103481 185 288 2.22E-8 T 09-03-2017 NA29_RS16945 16e538ef5831081b4c731a1607e7676f 300 SUPERFAMILY SSF103481 42 137 4.32E-12 T 09-03-2017 NA29_RS14730 ce1ca688a0cbc894c2595ade74d29b43 426 SUPERFAMILY SSF103473 19 407 4.58E-38 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS14730 ce1ca688a0cbc894c2595ade74d29b43 426 Gene3D G3DSA:1.20.1250.20 225 408 5.4E-10 T 09-03-2017 NA29_RS14730 ce1ca688a0cbc894c2595ade74d29b43 426 Gene3D G3DSA:1.20.1250.20 23 208 2.2E-15 T 09-03-2017 NA29_RS14730 ce1ca688a0cbc894c2595ade74d29b43 426 Pfam PF05977 Transmembrane secretion effector 42 411 1.6E-27 T 09-03-2017 IPR010290 Transmembrane secretion effector NA29_RS15520 f0a916887d697e93e3ca557075072873 135 Pfam PF14347 Domain of unknown function (DUF4399) 43 132 4.5E-37 T 09-03-2017 IPR025512 Domain of unknown function DUF4399 NA29_RS15215 baf416ee74cf63d5b1fa5575db4332e6 552 Pfam PF06418 CTP synthase N-terminus 3 270 2.6E-126 T 09-03-2017 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 NA29_RS15215 baf416ee74cf63d5b1fa5575db4332e6 552 SUPERFAMILY SSF52540 2 270 3.09E-120 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15215 baf416ee74cf63d5b1fa5575db4332e6 552 SUPERFAMILY SSF52317 292 545 2.07E-84 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS15215 baf416ee74cf63d5b1fa5575db4332e6 552 Pfam PF00117 Glutamine amidotransferase class-I 305 539 4.4E-56 T 09-03-2017 IPR017926 Glutamine amidotransferase NA29_RS15215 baf416ee74cf63d5b1fa5575db4332e6 552 Hamap MF_01227 CTP synthase [pyrG]. 2 545 51.118 T 09-03-2017 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 NA29_RS15215 baf416ee74cf63d5b1fa5575db4332e6 552 Gene3D G3DSA:3.40.50.300 1 288 9.9E-134 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS15215 baf416ee74cf63d5b1fa5575db4332e6 552 Gene3D G3DSA:3.40.50.880 291 544 4.9E-99 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like NA29_RS15215 baf416ee74cf63d5b1fa5575db4332e6 552 TIGRFAM TIGR00337 PyrG: CTP synthase 1 540 2.4E-241 T 09-03-2017 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 NA29_RS18395 1639b0316917b8e1d6edd96cc9792c19 296 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 46 173 4.8E-34 T 09-03-2017 IPR007621 TPM domain NA29_RS21250 b6e233e89da4664225db0ad1b329ee59 433 Pfam PF04932 O-Antigen ligase 201 351 1.7E-20 T 09-03-2017 IPR007016 O-antigen ligase-related NA29_RS11070 6055be3dfbbae6247d7106c58544a34c 156 Gene3D G3DSA:3.10.180.10 1 128 7.5E-39 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS11070 6055be3dfbbae6247d7106c58544a34c 156 PIRSF PIRSF021700 1 156 2.1E-61 T 09-03-2017 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase NA29_RS11070 6055be3dfbbae6247d7106c58544a34c 156 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 116 6.6E-44 T 09-03-2017 IPR028973 PhnB-like NA29_RS11070 6055be3dfbbae6247d7106c58544a34c 156 SUPERFAMILY SSF54593 3 154 1.13E-44 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS03990 308b76d8d83ae5d661fdee96783ef58f 118 Pfam PF07007 Protein of unknown function (DUF1311) 12 102 4.6E-20 T 09-03-2017 IPR009739 Protein of unknown function DUF1311 NA29_RS10445 f8756e0cf436083579756745b667491a 426 Pfam PF02653 Branched-chain amino acid transport system / permease component 46 304 1.0E-22 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS17955 63534907a4c5b891e06030995162ba4f 375 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 348 2.4E-60 T 09-03-2017 IPR005495 Permease LptG/LptF-related GO:0016021 NA29_RS17955 63534907a4c5b891e06030995162ba4f 375 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 2.6E-120 T 09-03-2017 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 NA29_RS20480 ab70f3850b7ad000142693b073191c62 447 Pfam PF12801 4Fe-4S binding domain 135 173 9.4E-5 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NA29_RS20480 ab70f3850b7ad000142693b073191c62 447 Pfam PF12801 4Fe-4S binding domain 50 90 5.8E-10 T 09-03-2017 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain NA29_RS16970 84ec2f3e319f98e7f4ba24b29223d026 211 Gene3D G3DSA:1.20.120.80 32 208 3.9E-49 T 09-03-2017 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16970 84ec2f3e319f98e7f4ba24b29223d026 211 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 32 209 2.5E-82 T 09-03-2017 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 NA29_RS16970 84ec2f3e319f98e7f4ba24b29223d026 211 SUPERFAMILY SSF81452 28 207 5.1E-56 T 09-03-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS16970 84ec2f3e319f98e7f4ba24b29223d026 211 Pfam PF00510 Cytochrome c oxidase subunit III 22 207 1.2E-15 T 09-03-2017 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 NA29_RS07080 a7ddc6d1a3d038724242807c89b2ea48 246 Pfam PF13471 Transglutaminase-like superfamily 139 242 5.2E-17 T 09-03-2017 IPR032708 Microcin J25-processing protein McjB, C-terminal NA29_RS06235 8c4b058af1694a0fb71a2c798a076435 244 Pfam PF06912 Protein of unknown function (DUF1275) 31 240 2.6E-31 T 09-03-2017 IPR010699 Protein of unknown function DUF1275 NA29_RS03295 99499191bb5b240a7466b424a5376183 83 SUPERFAMILY SSF161234 8 47 1.83E-5 T 09-03-2017 NA29_RS03295 99499191bb5b240a7466b424a5376183 83 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 9 50 2.3E-5 T 09-03-2017 IPR011723 Zinc finger/thioredoxin putative NA29_RS15030 87437705396599e608177cfcf0df4877 211 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 164 6.2E-37 T 09-03-2017 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 NA29_RS19580 4d7e0a51bad6d3712ee081e11bde2334 210 SUPERFAMILY SSF52218 5 205 1.44E-63 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS19580 4d7e0a51bad6d3712ee081e11bde2334 210 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 3 206 43.328 T 09-03-2017 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 NA29_RS19580 4d7e0a51bad6d3712ee081e11bde2334 210 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 203 3.1E-95 T 09-03-2017 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 NA29_RS19580 4d7e0a51bad6d3712ee081e11bde2334 210 Gene3D G3DSA:3.40.50.360 2 208 9.7E-82 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS19580 4d7e0a51bad6d3712ee081e11bde2334 210 Pfam PF03358 NADPH-dependent FMN reductase 6 148 2.6E-14 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 NA29_RS01760 c9adae412c8281901980c13e329e4097 206 Pfam PF13460 NAD(P)H-binding 7 193 2.3E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS01760 c9adae412c8281901980c13e329e4097 206 SUPERFAMILY SSF51735 1 205 2.38E-40 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS01760 c9adae412c8281901980c13e329e4097 206 Gene3D G3DSA:3.40.50.720 1 206 2.1E-40 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS21970 66918a986ca1079f07447d621a943cf4 296 SUPERFAMILY SSF103481 192 295 3.79E-14 T 09-03-2017 NA29_RS21970 66918a986ca1079f07447d621a943cf4 296 SUPERFAMILY SSF103481 45 146 1.7E-13 T 09-03-2017 NA29_RS21970 66918a986ca1079f07447d621a943cf4 296 Pfam PF00892 EamA-like transporter family 157 293 5.4E-19 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS21970 66918a986ca1079f07447d621a943cf4 296 Pfam PF00892 EamA-like transporter family 14 143 1.2E-13 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS02310 dca4536e462ebf021d608eca61ba6e41 294 Pfam PF05013 N-formylglutamate amidohydrolase 27 258 2.1E-60 T 09-03-2017 IPR007709 N-formylglutamate amidohydrolase NA29_RS02310 dca4536e462ebf021d608eca61ba6e41 294 Gene3D G3DSA:3.40.630.40 22 289 1.1E-82 T 09-03-2017 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 NA29_RS02310 dca4536e462ebf021d608eca61ba6e41 294 SUPERFAMILY SSF53187 21 288 2.26E-75 T 09-03-2017 NA29_RS21195 3a074d3957b81c556b5028618d675b6d 399 Gene3D G3DSA:3.20.20.140 69 353 8.8E-91 T 09-03-2017 NA29_RS21195 3a074d3957b81c556b5028618d675b6d 399 SUPERFAMILY SSF51338 3 57 3.91E-15 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS21195 3a074d3957b81c556b5028618d675b6d 399 SUPERFAMILY SSF51338 354 397 3.91E-15 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS21195 3a074d3957b81c556b5028618d675b6d 399 SUPERFAMILY SSF51556 57 363 2.38E-68 T 09-03-2017 IPR032466 Metal-dependent hydrolase NA29_RS21195 3a074d3957b81c556b5028618d675b6d 399 Gene3D G3DSA:2.30.40.10 1 68 2.1E-17 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 NA29_RS21195 3a074d3957b81c556b5028618d675b6d 399 Pfam PF07969 Amidohydrolase family 191 398 5.3E-17 T 09-03-2017 IPR013108 Amidohydrolase 3 NA29_RS05640 7f2d792cce311d86b8f6b5daf2b8cbc0 149 Gene3D G3DSA:2.60.40.1120 80 144 1.6E-7 T 09-03-2017 IPR014766 Carboxypeptidase, regulatory domain NA29_RS05640 7f2d792cce311d86b8f6b5daf2b8cbc0 149 SUPERFAMILY SSF49452 80 146 7.06E-6 T 09-03-2017 IPR013784 Carbohydrate-binding-like fold GO:0030246 NA29_RS11185 28dd2b34951c3372ee5e4b15a7d6b0c9 215 Pfam PF02230 Phospholipase/Carboxylesterase 103 210 2.2E-6 T 09-03-2017 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 NA29_RS11185 28dd2b34951c3372ee5e4b15a7d6b0c9 215 Gene3D G3DSA:3.40.50.1820 22 199 1.7E-27 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS11185 28dd2b34951c3372ee5e4b15a7d6b0c9 215 SUPERFAMILY SSF53474 29 214 3.05E-30 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS12870 7c38b7ae94f20ee8b27f98662e7695d8 71 Pfam PF06945 Protein of unknown function (DUF1289) 10 54 2.3E-17 T 09-03-2017 IPR010710 Protein of unknown function DUF1289 NA29_RS04965 b0d8bea2960c052226f02458cb2889c7 183 Pfam PF13937 Domain of unknown function (DUF4212) 63 136 3.8E-22 T 09-03-2017 IPR019886 Sodium symporter small subunit, predicted NA29_RS04965 b0d8bea2960c052226f02458cb2889c7 183 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 65 135 8.8E-19 T 09-03-2017 IPR019886 Sodium symporter small subunit, predicted NA29_RS02615 d4c16f0701c4994ebc803692bee97de7 322 SUPERFAMILY SSF47648 17 78 3.27E-11 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS02615 d4c16f0701c4994ebc803692bee97de7 322 Gene3D G3DSA:3.40.1030.10 90 300 1.5E-26 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS02615 d4c16f0701c4994ebc803692bee97de7 322 Gene3D G3DSA:1.20.970.10 17 71 1.3E-14 T 09-03-2017 NA29_RS02615 d4c16f0701c4994ebc803692bee97de7 322 Pfam PF02885 Glycosyl transferase family, helical bundle domain 14 71 3.1E-9 T 09-03-2017 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS02615 d4c16f0701c4994ebc803692bee97de7 322 SUPERFAMILY SSF52418 83 304 9.1E-35 T 09-03-2017 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 NA29_RS25150 2ee1b3fb694458cad2f90371a817377b 351 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 335 1.3E-16 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS21405 78d5d2b4e7f2e74aa9e2d11078b00d02 178 SUPERFAMILY SSF54593 70 175 4.68E-15 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS21405 78d5d2b4e7f2e74aa9e2d11078b00d02 178 Gene3D G3DSA:3.10.180.10 63 175 1.4E-27 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS07390 a15024ac4cd768deb69b558c54601ab5 254 SUPERFAMILY SSF161098 54 243 1.01E-27 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS07390 a15024ac4cd768deb69b558c54601ab5 254 Gene3D G3DSA:1.10.3720.10 46 252 9.3E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS07390 a15024ac4cd768deb69b558c54601ab5 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 252 6.8E-27 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS06335 7f9ae0334ef276c34c8373d76054e61c 214 Pfam PF07273 Protein of unknown function (DUF1439) 63 189 6.9E-14 T 09-03-2017 IPR010835 Protein of unknown function DUF1439 NA29_RS12070 f94ddbcf7205469e343a88af5b6c81d7 179 Pfam PF01292 Prokaryotic cytochrome b561 7 175 4.0E-22 T 09-03-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 NA29_RS12070 f94ddbcf7205469e343a88af5b6c81d7 179 SUPERFAMILY SSF81342 3 175 1.49E-25 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 NA29_RS00085 4c4e3de5f4d87a013baf3d682b05d03d 293 Gene3D G3DSA:3.20.20.60 7 289 7.4E-84 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS00085 4c4e3de5f4d87a013baf3d682b05d03d 293 SUPERFAMILY SSF51621 4 291 4.49E-91 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 NA29_RS00085 4c4e3de5f4d87a013baf3d682b05d03d 293 Pfam PF13714 Phosphoenolpyruvate phosphomutase 16 253 8.6E-52 T 09-03-2017 NA29_RS15265 8b93819f5045b63d96f8e81160c6f160 359 Pfam PF12833 Helix-turn-helix domain 275 350 5.4E-18 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS15265 8b93819f5045b63d96f8e81160c6f160 359 SMART SM00342 269 351 5.2E-22 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 NA29_RS15265 8b93819f5045b63d96f8e81160c6f160 359 Gene3D G3DSA:1.10.10.60 253 305 7.1E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS15265 8b93819f5045b63d96f8e81160c6f160 359 SUPERFAMILY SSF46689 254 303 3.49E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS15265 8b93819f5045b63d96f8e81160c6f160 359 Gene3D G3DSA:1.10.10.60 306 350 8.1E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS15265 8b93819f5045b63d96f8e81160c6f160 359 SUPERFAMILY SSF46689 305 353 5.38E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS02645 9924578a84d98304f57e54b26cb99c08 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 151 175 3.1E-54 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS02645 9924578a84d98304f57e54b26cb99c08 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 188 207 3.1E-54 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS02645 9924578a84d98304f57e54b26cb99c08 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 39 60 3.1E-54 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS02645 9924578a84d98304f57e54b26cb99c08 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 69 91 3.1E-54 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS02645 9924578a84d98304f57e54b26cb99c08 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 114 139 3.1E-54 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS02645 9924578a84d98304f57e54b26cb99c08 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 208 227 3.1E-54 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS02645 9924578a84d98304f57e54b26cb99c08 266 TIGRFAM TIGR01291 nodJ: ABC-2 type transporter, NodJ family 18 264 8.3E-96 T 09-03-2017 IPR005981 ABC-2 type transporter, NodJ GO:0005215|GO:0009877|GO:0015772|GO:0016020 NA29_RS02645 9924578a84d98304f57e54b26cb99c08 266 PIRSF PIRSF006648 2 265 3.4E-24 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 NA29_RS02645 9924578a84d98304f57e54b26cb99c08 266 Pfam PF01061 ABC-2 type transporter 21 230 8.8E-25 T 09-03-2017 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 NA29_RS16455 e5dbea4da466105df089093b5e38dd9c 146 SMART SM00091 5 71 1.2E-7 T 09-03-2017 IPR000014 PAS domain NA29_RS16455 e5dbea4da466105df089093b5e38dd9c 146 Pfam PF00989 PAS fold 9 119 4.6E-14 T 09-03-2017 IPR013767 PAS fold GO:0006355 NA29_RS16455 e5dbea4da466105df089093b5e38dd9c 146 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 129 3.9E-19 T 09-03-2017 IPR000014 PAS domain NA29_RS16455 e5dbea4da466105df089093b5e38dd9c 146 Gene3D G3DSA:3.30.450.20 9 119 3.0E-21 T 09-03-2017 NA29_RS16455 e5dbea4da466105df089093b5e38dd9c 146 SUPERFAMILY SSF55785 16 132 6.14E-25 T 09-03-2017 IPR000014 PAS domain NA29_RS00475 206210c28f44cbe6f063ba264e703cdc 280 Gene3D G3DSA:3.20.20.70 3 279 4.0E-68 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS00475 206210c28f44cbe6f063ba264e703cdc 280 Pfam PF05853 beta-keto acid cleavage enzyme 6 278 5.4E-61 T 09-03-2017 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24 NA29_RS22195 3b72725f71d450777d13347f6bb4a463 738 SUPERFAMILY SSF50249 238 577 1.37E-72 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold NA29_RS22195 3b72725f71d450777d13347f6bb4a463 738 SMART SM00955 246 528 2.0E-64 T 09-03-2017 NA29_RS22195 3b72725f71d450777d13347f6bb4a463 738 Pfam PF00773 RNB domain 483 525 5.1E-10 T 09-03-2017 NA29_RS22195 3b72725f71d450777d13347f6bb4a463 738 Pfam PF00773 RNB domain 250 479 4.9E-33 T 09-03-2017 NA29_RS07005 18a95b017907be253524e19a5c167504 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 32 78 4.3E-14 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS07005 18a95b017907be253524e19a5c167504 216 Gene3D G3DSA:1.10.357.10 16 215 1.0E-28 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 NA29_RS07005 18a95b017907be253524e19a5c167504 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 53 76 1.3E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS07005 18a95b017907be253524e19a5c167504 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 45 1.3E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 NA29_RS07005 18a95b017907be253524e19a5c167504 216 SUPERFAMILY SSF46689 16 97 9.22E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS07010 abecd33819b2bb2227ab7898248bf4e7 535 Pfam PF02690 Na+/Pi-cotransporter 17 157 9.5E-39 T 09-03-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 NA29_RS07010 abecd33819b2bb2227ab7898248bf4e7 535 Pfam PF02690 Na+/Pi-cotransporter 179 260 4.6E-13 T 09-03-2017 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 NA29_RS08755 8652c6f3b73a3e4e093b1599441509cb 229 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 229 6.1E-99 T 09-03-2017 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE NA29_RS08755 8652c6f3b73a3e4e093b1599441509cb 229 SUPERFAMILY SSF52540 1 216 2.11E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08755 8652c6f3b73a3e4e093b1599441509cb 229 Gene3D G3DSA:3.40.50.300 1 217 5.2E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase NA29_RS08755 8652c6f3b73a3e4e093b1599441509cb 229 SMART SM00382 26 208 9.0E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain NA29_RS08755 8652c6f3b73a3e4e093b1599441509cb 229 Pfam PF00005 ABC transporter 17 158 7.8E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 NA29_RS00625 13d01ad172be5ddbdbb6354906c72f99 135 Pfam PF07681 DoxX 10 89 7.7E-16 T 09-03-2017 IPR032808 DoxX family NA29_RS03525 471f7b5031d2388221c0d8c9ebc1c610 405 TIGRFAM TIGR02484 CitB: CitB domain protein 39 399 3.8E-124 T 09-03-2017 IPR012830 Citrate utilization protein B NA29_RS03525 471f7b5031d2388221c0d8c9ebc1c610 405 SUPERFAMILY SSF54862 49 99 7.03E-7 T 09-03-2017 NA29_RS03525 471f7b5031d2388221c0d8c9ebc1c610 405 SUPERFAMILY SSF103501 182 398 1.57E-33 T 09-03-2017 IPR023234 NarG-like domain NA29_RS03525 471f7b5031d2388221c0d8c9ebc1c610 405 Gene3D G3DSA:3.30.70.20 38 98 9.0E-6 T 09-03-2017 NA29_RS14010 d3ea31f5475d02e78391fc5bb2e95d64 114 Pfam PF13663 Domain of unknown function (DUF4148) 6 78 2.5E-16 T 09-03-2017 IPR025421 Protein of unknown function DUF4148 NA29_RS14010 d3ea31f5475d02e78391fc5bb2e95d64 114 Pfam PF13663 Domain of unknown function (DUF4148) 87 111 2.0E-6 T 09-03-2017 IPR025421 Protein of unknown function DUF4148 NA29_RS23105 6555e7e3ac314ba373e4676f3f4f2bb7 336 Pfam PF04830 Possible hemagglutinin (DUF637) 41 135 7.7E-19 T 09-03-2017 IPR006915 Domain of unknown function DUF637, haemagglutinin putative NA29_RS06355 ed6ece8fa5cd7a676cca49f01837a5ec 500 Gene3D G3DSA:1.20.1250.20 25 194 8.1E-21 T 09-03-2017 NA29_RS06355 ed6ece8fa5cd7a676cca49f01837a5ec 500 SUPERFAMILY SSF103473 270 483 6.93E-37 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS06355 ed6ece8fa5cd7a676cca49f01837a5ec 500 SUPERFAMILY SSF103473 26 212 6.93E-37 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS06355 ed6ece8fa5cd7a676cca49f01837a5ec 500 Gene3D G3DSA:1.20.1250.20 303 482 1.7E-6 T 09-03-2017 NA29_RS06355 ed6ece8fa5cd7a676cca49f01837a5ec 500 Pfam PF07690 Major Facilitator Superfamily 30 436 6.2E-29 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS16175 81482f075e197bd4379247006ff348fc 339 Pfam PF04773 FecR protein 126 221 8.6E-22 T 09-03-2017 IPR006860 FecR protein NA29_RS16175 81482f075e197bd4379247006ff348fc 339 Pfam PF16220 Domain of unknown function (DUF4880) 24 65 3.7E-14 T 09-03-2017 IPR032623 FecR, N-terminal NA29_RS16175 81482f075e197bd4379247006ff348fc 339 PIRSF PIRSF018266 13 335 1.2E-88 T 09-03-2017 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NA29_RS00280 c1c80164e8fc03a614ea65a24997af38 102 Pfam PF13663 Domain of unknown function (DUF4148) 1 69 1.7E-16 T 09-03-2017 IPR025421 Protein of unknown function DUF4148 NA29_RS00785 50b13b43052da69a8aed0dcf06a1594c 86 Pfam PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF 16 85 2.3E-17 T 09-03-2017 IPR021123 Type III secretion, needle-protein-like GO:0009405|GO:0015031 NA29_RS00785 50b13b43052da69a8aed0dcf06a1594c 86 SUPERFAMILY SSF140129 12 81 9.02E-14 T 09-03-2017 NA29_RS08860 ad8b6ea5caaae2845e21310c7435f4fe 424 SUPERFAMILY SSF103473 5 413 6.41E-61 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS08860 ad8b6ea5caaae2845e21310c7435f4fe 424 Pfam PF07690 Major Facilitator Superfamily 54 375 5.1E-29 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS08860 ad8b6ea5caaae2845e21310c7435f4fe 424 Gene3D G3DSA:1.20.1250.20 233 413 5.6E-17 T 09-03-2017 NA29_RS08860 ad8b6ea5caaae2845e21310c7435f4fe 424 Gene3D G3DSA:1.20.1250.20 26 215 3.0E-25 T 09-03-2017 NA29_RS19255 1005a2034a3a13ac6de440b7d6753db9 391 Pfam PF07690 Major Facilitator Superfamily 9 337 2.5E-15 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS19255 1005a2034a3a13ac6de440b7d6753db9 391 Gene3D G3DSA:1.20.1250.20 14 187 8.1E-15 T 09-03-2017 NA29_RS19255 1005a2034a3a13ac6de440b7d6753db9 391 SUPERFAMILY SSF103473 3 382 1.44E-32 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS16295 c7e88d8208c120dd74569a06f4ed0be3 470 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 7 466 1.6E-179 T 09-03-2017 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 NA29_RS16295 c7e88d8208c120dd74569a06f4ed0be3 470 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 470 232.416 T 09-03-2017 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 NA29_RS16295 c7e88d8208c120dd74569a06f4ed0be3 470 Pfam PF12390 Selenocysteine synthase N terminal 7 44 2.5E-8 T 09-03-2017 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 NA29_RS16295 c7e88d8208c120dd74569a06f4ed0be3 470 Pfam PF03841 L-seryl-tRNA selenium transferase 81 453 7.4E-160 T 09-03-2017 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 NA29_RS16295 c7e88d8208c120dd74569a06f4ed0be3 470 SUPERFAMILY SSF53383 75 376 7.0E-47 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase NA29_RS16295 c7e88d8208c120dd74569a06f4ed0be3 470 Gene3D G3DSA:3.40.640.10 136 316 3.6E-34 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 NA29_RS07770 1275dc094c61749580b927a13de1011d 404 Gene3D G3DSA:3.40.50.2300 169 318 4.8E-23 T 09-03-2017 NA29_RS07770 1275dc094c61749580b927a13de1011d 404 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 35 51 9.1E-6 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS07770 1275dc094c61749580b927a13de1011d 404 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 57 73 9.1E-6 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS07770 1275dc094c61749580b927a13de1011d 404 Pfam PF13458 Periplasmic binding protein 34 376 4.2E-51 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS07770 1275dc094c61749580b927a13de1011d 404 SUPERFAMILY SSF53822 34 402 9.08E-72 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS07770 1275dc094c61749580b927a13de1011d 404 Gene3D G3DSA:3.40.50.2300 30 160 1.6E-39 T 09-03-2017 NA29_RS07770 1275dc094c61749580b927a13de1011d 404 Gene3D G3DSA:3.40.50.2300 319 367 1.6E-39 T 09-03-2017 NA29_RS23535 334738f12c795291bb1121951026af5d 301 Pfam PF04333 MlaA lipoprotein 29 221 2.4E-77 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 NA29_RS23535 334738f12c795291bb1121951026af5d 301 PRINTS PR01805 VacJ lipoprotein signature 30 43 9.9E-27 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 NA29_RS23535 334738f12c795291bb1121951026af5d 301 PRINTS PR01805 VacJ lipoprotein signature 98 115 9.9E-27 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 NA29_RS23535 334738f12c795291bb1121951026af5d 301 PRINTS PR01805 VacJ lipoprotein signature 134 151 9.9E-27 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 NA29_RS23535 334738f12c795291bb1121951026af5d 301 PRINTS PR01805 VacJ lipoprotein signature 47 63 9.9E-27 T 09-03-2017 IPR007428 MlaA lipoprotein GO:0016020 NA29_RS11140 df98e08b5a6b43ee25dd94d153d87fa8 306 Gene3D G3DSA:3.20.20.70 4 295 1.8E-90 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS11140 df98e08b5a6b43ee25dd94d153d87fa8 306 Pfam PF05853 beta-keto acid cleavage enzyme 5 293 9.5E-90 T 09-03-2017 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24 NA29_RS18575 fa905d7f33fcc8dd55ace5f094143b58 470 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 98 290 5.6E-27 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS18575 fa905d7f33fcc8dd55ace5f094143b58 470 Gene3D G3DSA:1.10.287.950 48 258 2.7E-40 T 09-03-2017 NA29_RS18575 fa905d7f33fcc8dd55ace5f094143b58 470 SMART SM00283 33 287 2.7E-23 T 09-03-2017 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 NA29_RS18575 fa905d7f33fcc8dd55ace5f094143b58 470 SUPERFAMILY SSF58104 16 296 1.48E-47 T 09-03-2017 NA29_RS05000 c56c4b74aa65d57fc53ab21c211fefd6 199 Pfam PF11086 Protein of unknown function (DUF2878) 9 161 4.0E-34 T 09-03-2017 IPR021306 Protein of unknown function DUF2878 NA29_RS05035 90476b3bf59d25c2c087e2f16f79c40f 546 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 237 253 3.6E-32 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS05035 90476b3bf59d25c2c087e2f16f79c40f 546 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 285 3.6E-32 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS05035 90476b3bf59d25c2c087e2f16f79c40f 546 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 136 155 3.6E-32 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS05035 90476b3bf59d25c2c087e2f16f79c40f 546 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 442 459 3.6E-32 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS05035 90476b3bf59d25c2c087e2f16f79c40f 546 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 359 377 3.6E-32 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS05035 90476b3bf59d25c2c087e2f16f79c40f 546 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 41 66 3.6E-32 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS05035 90476b3bf59d25c2c087e2f16f79c40f 546 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 383 401 3.6E-32 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS05035 90476b3bf59d25c2c087e2f16f79c40f 546 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 415 430 3.6E-32 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS05035 90476b3bf59d25c2c087e2f16f79c40f 546 SUPERFAMILY SSF56235 13 545 8.88E-143 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal NA29_RS05035 90476b3bf59d25c2c087e2f16f79c40f 546 Pfam PF01019 Gamma-glutamyltranspeptidase 34 541 1.7E-124 T 09-03-2017 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 NA29_RS01590 7942de8efb40caf636e32a317b3e7164 357 Gene3D G3DSA:2.40.160.10 24 357 5.2E-93 T 09-03-2017 IPR023614 Porin domain NA29_RS01590 7942de8efb40caf636e32a317b3e7164 357 Pfam PF13609 Gram-negative porin 10 326 2.2E-55 T 09-03-2017 NA29_RS01590 7942de8efb40caf636e32a317b3e7164 357 PRINTS PR00184 Neisseria sp. porin signature 301 325 1.6E-7 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS01590 7942de8efb40caf636e32a317b3e7164 357 PRINTS PR00184 Neisseria sp. porin signature 57 82 1.6E-7 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS01590 7942de8efb40caf636e32a317b3e7164 357 PRINTS PR00184 Neisseria sp. porin signature 192 209 1.6E-7 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS01590 7942de8efb40caf636e32a317b3e7164 357 SUPERFAMILY SSF56935 24 357 3.36E-84 T 09-03-2017 NA29_RS16600 70aace94a684317d7c22026dc54b7099 272 Pfam PF04951 D-aminopeptidase 1 262 2.3E-98 T 09-03-2017 IPR007035 Peptidase M55, D-aminopeptidase NA29_RS16600 70aace94a684317d7c22026dc54b7099 272 Gene3D G3DSA:3.30.1360.130 208 265 2.9E-4 T 09-03-2017 NA29_RS16600 70aace94a684317d7c22026dc54b7099 272 Gene3D G3DSA:3.40.50.10780 1 207 6.6E-78 T 09-03-2017 IPR027476 D-aminopeptidase, N-terminal NA29_RS16600 70aace94a684317d7c22026dc54b7099 272 PIRSF PIRSF015853 1 272 2.2E-100 T 09-03-2017 IPR007035 Peptidase M55, D-aminopeptidase NA29_RS16600 70aace94a684317d7c22026dc54b7099 272 SUPERFAMILY SSF63992 1 271 2.35E-101 T 09-03-2017 IPR007035 Peptidase M55, D-aminopeptidase NA29_RS21430 1adda84a0b7c1a0428b97613c05aa615 208 PIRSF PIRSF006324 1 205 3.4E-43 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS21430 1adda84a0b7c1a0428b97613c05aa615 208 Pfam PF01810 LysE type translocator 15 202 4.7E-29 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS20135 1426f64d6108beba1a76c261d34cc1d8 104 Pfam PF12112 Protein of unknown function (DUF3579) 8 96 6.1E-37 T 09-03-2017 IPR021969 Protein of unknown function DUF3579 NA29_RS15025 0a8de04582464c66a00b1e8d440f7829 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 98 2.0E-24 T 09-03-2017 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 NA29_RS15025 0a8de04582464c66a00b1e8d440f7829 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 1 102 20.754 T 09-03-2017 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 NA29_RS21690 7576997395fff3e252e25a3364bfde0c 242 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 12 191 8.8E-72 T 09-03-2017 IPR022301 Integral membrane protein YjbE NA29_RS21690 7576997395fff3e252e25a3364bfde0c 242 Pfam PF03741 Integral membrane protein TerC family 14 190 7.7E-48 T 09-03-2017 IPR005496 Integral membrane protein TerC GO:0016021 NA29_RS21850 aff91aff5900dd96504888e1fd59e481 215 Gene3D G3DSA:1.10.3720.10 6 199 1.6E-31 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS21850 aff91aff5900dd96504888e1fd59e481 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 210 1.8E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS21850 aff91aff5900dd96504888e1fd59e481 215 SUPERFAMILY SSF161098 9 202 3.4E-36 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 NA29_RS13000 6d16d6add7b03756c821cb210274f554 295 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 278 9.3E-41 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS24770 a993e3b4ebbc7a882bda09ab4165e91a 681 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 17 113 8.6E-19 T 09-03-2017 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 NA29_RS24770 a993e3b4ebbc7a882bda09ab4165e91a 681 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 480 663 4.1E-11 T 09-03-2017 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 NA29_RS24770 a993e3b4ebbc7a882bda09ab4165e91a 681 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 251 416 1.3E-29 T 09-03-2017 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 NA29_RS09300 99c70e496b790f4871a0edb278ec4233 157 SUPERFAMILY SSF54637 25 154 2.28E-33 T 09-03-2017 IPR029069 HotDog domain NA29_RS09300 99c70e496b790f4871a0edb278ec4233 157 Gene3D G3DSA:3.10.129.10 24 154 6.4E-38 T 09-03-2017 IPR029069 HotDog domain NA29_RS09300 99c70e496b790f4871a0edb278ec4233 157 Pfam PF13279 Thioesterase-like superfamily 34 150 3.0E-14 T 09-03-2017 NA29_RS20060 f084387fbb1aba319f98041d10164d97 136 Pfam PF02643 Uncharacterized ACR, COG1430 30 132 1.5E-33 T 09-03-2017 IPR003795 Protein of unknown function DUF192 NA29_RS24325 ea565e14a194be0e0fc39181dfaf93e5 178 SUPERFAMILY SSF116927 56 175 7.59E-7 T 09-03-2017 NA29_RS09000 3d7a0aaae4cb467a3a2fe90235254153 120 Pfam PF01152 Bacterial-like globin 2 116 1.0E-44 T 09-03-2017 IPR001486 Truncated hemoglobin GO:0019825 NA29_RS09000 3d7a0aaae4cb467a3a2fe90235254153 120 SUPERFAMILY SSF46458 2 118 4.32E-34 T 09-03-2017 IPR009050 Globin-like NA29_RS09000 3d7a0aaae4cb467a3a2fe90235254153 120 Gene3D G3DSA:1.10.490.10 2 118 7.4E-41 T 09-03-2017 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 NA29_RS09000 3d7a0aaae4cb467a3a2fe90235254153 120 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 46 70 - T 09-03-2017 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 NA29_RS21305 9876647cfeb9b24cd8c4a093b2eefc7d 252 SMART SM00287 30 92 0.0059 T 09-03-2017 IPR003646 SH3-like domain, bacterial-type NA29_RS21305 9876647cfeb9b24cd8c4a093b2eefc7d 252 Pfam PF08239 Bacterial SH3 domain 38 90 5.0E-9 T 09-03-2017 IPR003646 SH3-like domain, bacterial-type NA29_RS03560 50bcf2f8d3f1c7c617af41566cfaeaf1 420 Pfam PF07690 Major Facilitator Superfamily 23 311 2.3E-37 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS03560 50bcf2f8d3f1c7c617af41566cfaeaf1 420 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 87 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS03560 50bcf2f8d3f1c7c617af41566cfaeaf1 420 SUPERFAMILY SSF103473 12 402 3.66E-71 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS03560 50bcf2f8d3f1c7c617af41566cfaeaf1 420 Gene3D G3DSA:1.20.1250.20 18 196 1.3E-32 T 09-03-2017 NA29_RS03560 50bcf2f8d3f1c7c617af41566cfaeaf1 420 Gene3D G3DSA:1.20.1250.20 226 399 1.2E-19 T 09-03-2017 NA29_RS03560 50bcf2f8d3f1c7c617af41566cfaeaf1 420 ProSitePatterns PS00217 Sugar transport proteins signature 2. 113 138 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS15665 3ef26d5ff6c0dffc3198f0246af112bd 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 1.4E-10 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS15665 3ef26d5ff6c0dffc3198f0246af112bd 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 1.4E-10 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS15665 3ef26d5ff6c0dffc3198f0246af112bd 383 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 279 292 1.4E-10 T 09-03-2017 IPR000709 Leu/Ile/Val-binding protein GO:0006865 NA29_RS15665 3ef26d5ff6c0dffc3198f0246af112bd 383 Gene3D G3DSA:3.40.50.2300 152 299 3.5E-41 T 09-03-2017 NA29_RS15665 3ef26d5ff6c0dffc3198f0246af112bd 383 Gene3D G3DSA:3.40.50.2300 300 352 1.7E-50 T 09-03-2017 NA29_RS15665 3ef26d5ff6c0dffc3198f0246af112bd 383 Gene3D G3DSA:3.40.50.2300 20 148 1.7E-50 T 09-03-2017 NA29_RS15665 3ef26d5ff6c0dffc3198f0246af112bd 383 Pfam PF13458 Periplasmic binding protein 26 360 2.2E-62 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS15665 3ef26d5ff6c0dffc3198f0246af112bd 383 SUPERFAMILY SSF53822 26 354 7.07E-83 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS17110 a4e930b7d1df76790ac6db2de0e0a3c4 333 Gene3D G3DSA:3.40.718.10 5 329 7.3E-128 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 NA29_RS17110 a4e930b7d1df76790ac6db2de0e0a3c4 333 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 323 2.8E-104 T 09-03-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS17110 a4e930b7d1df76790ac6db2de0e0a3c4 333 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 4 329 34.871 T 09-03-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS17110 a4e930b7d1df76790ac6db2de0e0a3c4 333 SUPERFAMILY SSF53659 6 331 2.3E-108 T 09-03-2017 NA29_RS17110 a4e930b7d1df76790ac6db2de0e0a3c4 333 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 328 9.5E-110 T 09-03-2017 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 NA29_RS24150 8814cd1057a2f375e20416ffd174fe9d 108 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.2E-25 T 09-03-2017 IPR000390 Small multidrug resistance protein family GO:0016021 NA29_RS24150 8814cd1057a2f375e20416ffd174fe9d 108 SUPERFAMILY SSF103481 6 102 2.35E-18 T 09-03-2017 NA29_RS13735 98366f87a1bc5b6c6502d64a09388813 328 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 191 247 3.1E-16 T 09-03-2017 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 NA29_RS13735 98366f87a1bc5b6c6502d64a09388813 328 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 19 229 2.4E-80 T 09-03-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS13735 98366f87a1bc5b6c6502d64a09388813 328 SUPERFAMILY SSF55120 18 251 7.48E-82 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS13735 98366f87a1bc5b6c6502d64a09388813 328 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 40 190 8.4E-57 T 09-03-2017 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 NA29_RS13735 98366f87a1bc5b6c6502d64a09388813 328 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 18 325 19.505 T 09-03-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS13735 98366f87a1bc5b6c6502d64a09388813 328 Gene3D G3DSA:2.30.130.10 251 326 1.4E-7 T 09-03-2017 IPR015947 PUA-like domain NA29_RS13735 98366f87a1bc5b6c6502d64a09388813 328 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 325 1.9E-9 T 09-03-2017 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS01920 ee2a96506be0f10da69234a6bc89e3ef 172 Gene3D G3DSA:3.90.960.10 20 169 2.6E-41 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 NA29_RS01920 ee2a96506be0f10da69234a6bc89e3ef 172 Pfam PF04073 Aminoacyl-tRNA editing domain 43 158 1.3E-25 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 NA29_RS01920 ee2a96506be0f10da69234a6bc89e3ef 172 SUPERFAMILY SSF55826 22 168 1.23E-30 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 NA29_RS13725 8567a5604650e50379fe7558566bb741 164 Pfam PF03061 Thioesterase superfamily 27 100 6.1E-20 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 NA29_RS13725 8567a5604650e50379fe7558566bb741 164 SUPERFAMILY SSF54637 7 148 8.17E-41 T 09-03-2017 IPR029069 HotDog domain NA29_RS13725 8567a5604650e50379fe7558566bb741 164 Gene3D G3DSA:3.10.129.10 4 143 1.0E-44 T 09-03-2017 IPR029069 HotDog domain NA29_RS08275 9f675bfda8909140cb6e4cba8926a701 457 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 437 6.3E-167 T 09-03-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 NA29_RS08275 9f675bfda8909140cb6e4cba8926a701 457 PIRSF PIRSF006446 3 455 1.4E-205 T 09-03-2017 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 NA29_RS02115 e20d9469cb284afe6d8ab4d0a01312e4 239 Pfam PF02308 MgtC family 22 141 7.6E-35 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NA29_RS02115 e20d9469cb284afe6d8ab4d0a01312e4 239 PRINTS PR01837 MgtC/SapB protein signature 68 90 2.2E-40 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NA29_RS02115 e20d9469cb284afe6d8ab4d0a01312e4 239 PRINTS PR01837 MgtC/SapB protein signature 25 44 2.2E-40 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NA29_RS02115 e20d9469cb284afe6d8ab4d0a01312e4 239 PRINTS PR01837 MgtC/SapB protein signature 95 119 2.2E-40 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NA29_RS02115 e20d9469cb284afe6d8ab4d0a01312e4 239 PRINTS PR01837 MgtC/SapB protein signature 44 62 2.2E-40 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NA29_RS19750 4bee4a91566cd3fef76412ff8316fa2f 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 128 7.1E-14 T 09-03-2017 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain NA29_RS19750 4bee4a91566cd3fef76412ff8316fa2f 138 SUPERFAMILY SSF54593 3 133 1.61E-25 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS19750 4bee4a91566cd3fef76412ff8316fa2f 138 Gene3D G3DSA:3.10.180.10 3 135 5.2E-23 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS14810 c8f90a13b5b095603c6c326e33d90a15 216 Pfam PF00694 Aconitase C-terminal domain 1 132 1.0E-36 T 09-03-2017 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 NA29_RS14810 c8f90a13b5b095603c6c326e33d90a15 216 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 43.97 T 09-03-2017 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 NA29_RS14810 c8f90a13b5b095603c6c326e33d90a15 216 SUPERFAMILY SSF52016 1 201 4.71E-62 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS14810 c8f90a13b5b095603c6c326e33d90a15 216 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 6.0E-83 T 09-03-2017 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 NA29_RS14810 c8f90a13b5b095603c6c326e33d90a15 216 Gene3D G3DSA:3.20.19.10 1 204 1.8E-51 T 09-03-2017 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel NA29_RS12815 4392e93589c7736423fd54af3110a9b5 489 Pfam PF16963 PelD GGDEF domain 361 485 1.7E-44 T 09-03-2017 IPR031583 PelD, GGDEF domain NA29_RS12815 4392e93589c7736423fd54af3110a9b5 489 SUPERFAMILY SSF55781 233 354 7.06E-5 T 09-03-2017 IPR029016 GAF domain-like NA29_RS06545 ce8c14071fdf1b450eb4193290e7b8ae 302 Pfam PF13468 Glyoxalase-like domain 14 204 2.0E-28 T 09-03-2017 IPR025870 Glyoxalase-like domain NA29_RS06545 ce8c14071fdf1b450eb4193290e7b8ae 302 Gene3D G3DSA:3.10.180.10 13 121 3.5E-7 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS06545 ce8c14071fdf1b450eb4193290e7b8ae 302 SUPERFAMILY SSF54593 6 279 4.48E-10 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS24550 1f3637a9206ccc8029e450f9c6b94030 328 Pfam PF04392 ABC transporter substrate binding protein 34 325 2.2E-110 T 09-03-2017 IPR007487 ABC transporter, substrate-binding protein NA29_RS24550 1f3637a9206ccc8029e450f9c6b94030 328 Gene3D G3DSA:3.40.50.2300 161 291 7.4E-53 T 09-03-2017 NA29_RS24550 1f3637a9206ccc8029e450f9c6b94030 328 Gene3D G3DSA:3.40.50.2300 32 160 1.5E-56 T 09-03-2017 NA29_RS24550 1f3637a9206ccc8029e450f9c6b94030 328 SUPERFAMILY SSF53822 39 294 3.98E-19 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS11740 b4591f8ec54d1c4bfac050c02cf8036b 100 Pfam PF05488 PAAR motif 25 90 3.3E-21 T 09-03-2017 IPR008727 PAAR motif NA29_RS00640 57ab5cf36f235cf808afd2cd457e5900 281 Pfam PF01734 Patatin-like phospholipase 5 208 2.8E-19 T 09-03-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 NA29_RS00640 57ab5cf36f235cf808afd2cd457e5900 281 SUPERFAMILY SSF52151 5 272 1.12E-23 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 NA29_RS08145 8c3379b181c421ca23bb539361a94e00 191 PRINTS PR01228 Eggshell protein signature 14 25 1.2E-8 T 09-03-2017 NA29_RS08145 8c3379b181c421ca23bb539361a94e00 191 PRINTS PR01228 Eggshell protein signature 73 88 1.2E-8 T 09-03-2017 NA29_RS08145 8c3379b181c421ca23bb539361a94e00 191 PRINTS PR01228 Eggshell protein signature 98 108 1.2E-8 T 09-03-2017 NA29_RS08145 8c3379b181c421ca23bb539361a94e00 191 PRINTS PR01228 Eggshell protein signature 122 140 1.2E-8 T 09-03-2017 NA29_RS17165 b8f4d684efd9fec2425ef0125a1f99fc 59 Pfam PF11755 Protein of unknown function (DUF3311) 4 51 1.1E-20 T 09-03-2017 IPR021741 Protein of unknown function DUF3311 NA29_RS01445 4f2c346ff12cb0c00e1a21370cc33f8c 70 Pfam PF06348 Protein of unknown function (DUF1059) 4 58 3.6E-11 T 09-03-2017 IPR009409 Protein of unknown function DUF1059 NA29_RS00615 76192bef76b54b8f7f27f283717fe351 228 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 85 178 2.8E-14 T 09-03-2017 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 NA29_RS00615 76192bef76b54b8f7f27f283717fe351 228 SUPERFAMILY SSF51197 4 180 1.92E-7 T 09-03-2017 NA29_RS00615 76192bef76b54b8f7f27f283717fe351 228 SMART SM00702 3 179 1.4E-15 T 09-03-2017 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 NA29_RS00615 76192bef76b54b8f7f27f283717fe351 228 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 228 45.273 T 09-03-2017 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 NA29_RS11850 c6cc22476f1bc9b409efe6559049160e 350 PIRSF PIRSF006278 2 349 4.9E-92 T 09-03-2017 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase NA29_RS11850 c6cc22476f1bc9b409efe6559049160e 350 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 331 3.9E-48 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS11850 c6cc22476f1bc9b409efe6559049160e 350 Gene3D G3DSA:3.40.50.1100 121 344 5.5E-60 T 09-03-2017 NA29_RS11850 c6cc22476f1bc9b409efe6559049160e 350 SUPERFAMILY SSF53686 11 343 1.78E-73 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme NA29_RS15400 bc7a5461ec966f95283e2591477bdac9 197 Gene3D G3DSA:3.40.109.10 4 195 6.1E-44 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 NA29_RS15400 bc7a5461ec966f95283e2591477bdac9 197 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 1 197 45.509 T 09-03-2017 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 NA29_RS15400 bc7a5461ec966f95283e2591477bdac9 197 Pfam PF00881 Nitroreductase family 17 175 1.4E-13 T 09-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 NA29_RS15400 bc7a5461ec966f95283e2591477bdac9 197 SUPERFAMILY SSF55469 10 196 6.28E-45 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 NA29_RS15140 370d3429c29f4b32e263015be944d900 380 Pfam PF06804 NlpB/DapX lipoprotein 41 376 4.1E-51 T 09-03-2017 IPR010653 NlpB/DapX lipoprotein NA29_RS12995 00cbd2df5cb8398fce73c12caccc4a7b 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 266 1.0E-33 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS09940 3b7a39f9bc5185af29e0513a1073c4a9 538 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 45 210 3.8E-66 T 09-03-2017 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 NA29_RS09940 3b7a39f9bc5185af29e0513a1073c4a9 538 SUPERFAMILY SSF53474 178 465 2.48E-36 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS09940 3b7a39f9bc5185af29e0513a1073c4a9 538 Gene3D G3DSA:3.40.50.1820 141 504 1.2E-33 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS09940 3b7a39f9bc5185af29e0513a1073c4a9 538 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 9 535 2.1E-220 T 09-03-2017 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 NA29_RS02060 be753da27ec98e26c27c636e93328503 157 Pfam PF03061 Thioesterase superfamily 63 136 1.1E-11 T 09-03-2017 IPR006683 Thioesterase domain Reactome: R-HSA-75105 NA29_RS02060 be753da27ec98e26c27c636e93328503 157 Gene3D G3DSA:3.10.129.10 18 153 2.3E-31 T 09-03-2017 IPR029069 HotDog domain NA29_RS02060 be753da27ec98e26c27c636e93328503 157 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 33 148 1.1E-18 T 09-03-2017 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 NA29_RS02060 be753da27ec98e26c27c636e93328503 157 SUPERFAMILY SSF54637 23 150 6.97E-27 T 09-03-2017 IPR029069 HotDog domain NA29_RS23235 d03f8ba38d1fa45658c8fd7e2f7b40e4 211 Pfam PF04717 Type VI secretion system, phage-baseplate injector 3 114 2.6E-32 T 09-03-2017 IPR006531 Gp5 N-terminal NA29_RS23235 d03f8ba38d1fa45658c8fd7e2f7b40e4 211 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 5 208 1.6E-46 T 09-03-2017 IPR013046 Phage baseplate assembly protein V/Gp45 NA29_RS14710 19831ec9ff88bb158c2fe38de4f8e6f3 204 SUPERFAMILY SSF52218 5 174 9.94E-31 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS14710 19831ec9ff88bb158c2fe38de4f8e6f3 204 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 5 170 1.4E-62 T 09-03-2017 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 NA29_RS14710 19831ec9ff88bb158c2fe38de4f8e6f3 204 Gene3D G3DSA:3.40.50.360 4 175 4.7E-33 T 09-03-2017 IPR029039 Flavoprotein-like domain NA29_RS14710 19831ec9ff88bb158c2fe38de4f8e6f3 204 Pfam PF03358 NADPH-dependent FMN reductase 5 142 1.8E-32 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 NA29_RS01215 5c15251def1d0ac3823cbdda200e1ff6 359 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 313 1.5E-31 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS24800 6eab358bf15331dcc8899d79445f9f90 93 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 92 1.6E-10 T 09-03-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family NA29_RS15900 113f0fa4bce3ac2525831db1ba5cc520 140 Pfam PF10696 Protein of unknown function (DUF2501) 61 139 3.7E-26 T 09-03-2017 IPR019637 Protein of unknown function DUF2501 NA29_RS19220 077e8bd639c5d129083315fa4054a739 671 Pfam PF04632 Fusaric acid resistance protein family 9 662 3.5E-194 T 09-03-2017 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 NA29_RS17890 aa62c306e43e45186eccb8e74a36b8c2 515 Pfam PF05292 Malonyl-CoA decarboxylase (MCD) 152 489 2.6E-128 T 09-03-2017 IPR007956 Malonyl-CoA decarboxylase GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390918 NA29_RS17680 e2067b41f54912a7e43aab697ea9bc03 308 Gene3D G3DSA:3.40.50.1980 45 159 4.1E-33 T 09-03-2017 NA29_RS17680 e2067b41f54912a7e43aab697ea9bc03 308 SUPERFAMILY SSF53807 25 294 6.67E-69 T 09-03-2017 NA29_RS17680 e2067b41f54912a7e43aab697ea9bc03 308 Pfam PF01497 Periplasmic binding protein 48 275 1.8E-27 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 NA29_RS17680 e2067b41f54912a7e43aab697ea9bc03 308 Gene3D G3DSA:3.40.50.1980 166 296 4.9E-35 T 09-03-2017 NA29_RS23280 6d2e342019c7befff1fc33fe3ec0691b 392 Pfam PF04984 Phage tail sheath protein 1 95 1.4E-11 T 09-03-2017 IPR007067 Tail sheath protein NA29_RS23280 6d2e342019c7befff1fc33fe3ec0691b 392 Pfam PF04984 Phage tail sheath protein 93 377 1.3E-47 T 09-03-2017 IPR007067 Tail sheath protein NA29_RS24580 0e0eac2acc79bcd6879d47571ea014c6 166 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 84 136 4.5E-7 T 09-03-2017 IPR006260 TonB, C-terminal GO:0006810 NA29_RS24580 0e0eac2acc79bcd6879d47571ea014c6 166 Gene3D G3DSA:3.30.1150.10 53 157 7.9E-15 T 09-03-2017 NA29_RS24580 0e0eac2acc79bcd6879d47571ea014c6 166 SUPERFAMILY SSF74653 56 151 2.35E-11 T 09-03-2017 NA29_RS13910 b637f73f0062b8e54e1e0615476ecbca 223 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 50 207 2.5E-40 T 09-03-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 NA29_RS13910 b637f73f0062b8e54e1e0615476ecbca 223 Pfam PF00849 RNA pseudouridylate synthase 46 177 3.0E-14 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS13910 b637f73f0062b8e54e1e0615476ecbca 223 SUPERFAMILY SSF55120 45 211 4.8E-38 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 NA29_RS09780 850e6dca18cc11fea81a5e4880e3b986 160 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 41 158 2.5E-31 T 09-03-2017 IPR019223 Domain of unknown function DUF2147 NA29_RS06010 b38dfe6799d632e6b45cf29f3d4c5da7 295 SUPERFAMILY SSF53639 54 272 1.77E-61 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS06010 b38dfe6799d632e6b45cf29f3d4c5da7 295 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 61 246 1.3E-46 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS06010 b38dfe6799d632e6b45cf29f3d4c5da7 295 SMART SM01007 60 246 1.1E-52 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS06010 b38dfe6799d632e6b45cf29f3d4c5da7 295 Gene3D G3DSA:3.40.225.10 55 277 2.2E-62 T 09-03-2017 IPR001303 Class II aldolase/adducin N-terminal NA29_RS05450 4bdd62696e5e925abe21388fa1fe90de 503 SUPERFAMILY SSF53720 12 490 7.07E-161 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 NA29_RS05450 4bdd62696e5e925abe21388fa1fe90de 503 Gene3D G3DSA:3.40.309.10 273 451 3.3E-72 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 NA29_RS05450 4bdd62696e5e925abe21388fa1fe90de 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 286 297 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 NA29_RS05450 4bdd62696e5e925abe21388fa1fe90de 503 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 NA29_RS05450 4bdd62696e5e925abe21388fa1fe90de 503 Pfam PF00171 Aldehyde dehydrogenase family 24 486 1.9E-168 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 NA29_RS05450 4bdd62696e5e925abe21388fa1fe90de 503 Gene3D G3DSA:3.40.605.10 13 272 1.3E-91 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 NA29_RS04355 f6d4153d6c8ad3b1a4626f1eaaf2b39f 204 Pfam PF09335 SNARE associated Golgi protein 43 182 7.6E-8 T 09-03-2017 IPR032816 SNARE associated Golgi protein NA29_RS22905 c22677307128cf0449abe6118eaad6ec 158 Gene3D G3DSA:3.10.580.10 3 126 3.1E-34 T 09-03-2017 NA29_RS22905 c22677307128cf0449abe6118eaad6ec 158 Pfam PF00571 CBS domain 74 127 1.4E-12 T 09-03-2017 IPR000644 CBS domain NA29_RS22905 c22677307128cf0449abe6118eaad6ec 158 Pfam PF00571 CBS domain 5 62 1.1E-8 T 09-03-2017 IPR000644 CBS domain NA29_RS22905 c22677307128cf0449abe6118eaad6ec 158 SUPERFAMILY SSF54631 4 143 1.39E-34 T 09-03-2017 NA29_RS22905 c22677307128cf0449abe6118eaad6ec 158 SMART SM00116 81 128 1.7E-9 T 09-03-2017 IPR000644 CBS domain NA29_RS22905 c22677307128cf0449abe6118eaad6ec 158 SMART SM00116 15 63 0.0034 T 09-03-2017 IPR000644 CBS domain NA29_RS05335 9d3ca67429b086ae557478c8ec425cd5 227 SUPERFAMILY SSF46785 1 62 3.73E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05335 9d3ca67429b086ae557478c8ec425cd5 227 Gene3D G3DSA:1.10.10.10 1 63 5.3E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS05335 9d3ca67429b086ae557478c8ec425cd5 227 Pfam PF08279 HTH domain 6 59 8.2E-16 T 09-03-2017 IPR013196 Helix-turn-helix, type 11 NA29_RS05335 9d3ca67429b086ae557478c8ec425cd5 227 Pfam PF13280 WYL domain 138 224 4.4E-14 T 09-03-2017 IPR026881 WYL domain NA29_RS22515 f55172e0120712551828532535b2770b 377 PIRSF PIRSF029285 1 360 3.0E-131 T 09-03-2017 IPR014553 Predicted aminopeptidase NA29_RS22515 f55172e0120712551828532535b2770b 377 Pfam PF10023 Putative aminopeptidase 35 353 5.0E-126 T 09-03-2017 IPR014553 Predicted aminopeptidase NA29_RS06610 d99193835769e1bf8c5eb5cf486728d9 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 293 6.3E-37 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS02545 97a100cd19bc706fcd70ea8b732b361b 73 Pfam PF11174 Protein of unknown function (DUF2970) 14 68 4.7E-24 T 09-03-2017 IPR021344 Protein of unknown function DUF2970 NA29_RS01585 5fdbcb71f3a4ccacd4d45269e10bb63f 365 SUPERFAMILY SSF55347 122 360 1.11E-56 T 09-03-2017 NA29_RS01585 5fdbcb71f3a4ccacd4d45269e10bb63f 365 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 121 345 4.0E-16 T 09-03-2017 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 NA29_RS01585 5fdbcb71f3a4ccacd4d45269e10bb63f 365 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 103 5.6E-17 T 09-03-2017 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 NA29_RS01585 5fdbcb71f3a4ccacd4d45269e10bb63f 365 SUPERFAMILY SSF51735 1 172 5.49E-25 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS01585 5fdbcb71f3a4ccacd4d45269e10bb63f 365 Gene3D G3DSA:3.40.50.720 1 167 2.9E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS03255 fab5d7bf1a4dd1c5949339b2c47c1842 379 Gene3D G3DSA:2.40.160.10 24 379 2.2E-82 T 09-03-2017 IPR023614 Porin domain NA29_RS03255 fab5d7bf1a4dd1c5949339b2c47c1842 379 Pfam PF13609 Gram-negative porin 11 344 2.6E-43 T 09-03-2017 NA29_RS03255 fab5d7bf1a4dd1c5949339b2c47c1842 379 SUPERFAMILY SSF56935 25 379 1.43E-74 T 09-03-2017 NA29_RS12895 e89597870ffde6237a9c30d6abaddbcf 368 Pfam PF02653 Branched-chain amino acid transport system / permease component 63 345 3.9E-41 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS02105 4978928bac7b43efc5fba7c132cefcd5 105 Pfam PF08895 Domain of unknown function (DUF1840) 1 103 2.0E-29 T 09-03-2017 IPR014991 Protein of unknown function DUF1840 NA29_RS04950 746f1f6ecb0eaf761efe0d23abc8a272 189 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 21 180 1.1E-60 T 09-03-2017 IPR020761 Uncharacterised protein family UPF0114, bacteria NA29_RS04950 746f1f6ecb0eaf761efe0d23abc8a272 189 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 184 89.152 T 09-03-2017 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 NA29_RS04950 746f1f6ecb0eaf761efe0d23abc8a272 189 Pfam PF03350 Uncharacterized protein family, UPF0114 25 141 6.0E-39 T 09-03-2017 IPR005134 Uncharacterised protein family UPF0114 NA29_RS11295 a8e57067c4ff8b78625dfa74843afc6d 344 Gene3D G3DSA:3.40.190.10 129 259 1.9E-13 T 09-03-2017 NA29_RS11295 a8e57067c4ff8b78625dfa74843afc6d 344 SUPERFAMILY SSF53850 40 280 8.58E-30 T 09-03-2017 NA29_RS11295 a8e57067c4ff8b78625dfa74843afc6d 344 Pfam PF09084 NMT1/THI5 like 55 270 2.0E-39 T 09-03-2017 IPR015168 SsuA/THI5-like NA29_RS02130 14ccb522c46352aac54615dc5a204d83 130 Gene3D G3DSA:3.40.250.10 4 129 3.3E-30 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS02130 14ccb522c46352aac54615dc5a204d83 130 SMART SM00450 5 113 6.0E-12 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS02130 14ccb522c46352aac54615dc5a204d83 130 SUPERFAMILY SSF52821 8 127 1.83E-17 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS02130 14ccb522c46352aac54615dc5a204d83 130 Pfam PF00581 Rhodanese-like domain 17 105 8.4E-9 T 09-03-2017 IPR001763 Rhodanese-like domain NA29_RS00890 785c84aaeba8b602b433e46742f7608d 354 SUPERFAMILY SSF140693 129 345 4.32E-50 T 09-03-2017 NA29_RS00890 785c84aaeba8b602b433e46742f7608d 354 Pfam PF06511 Invasion plasmid antigen IpaD 73 352 1.6E-58 T 09-03-2017 IPR009483 Invasion plasmid antigen IpaD GO:0009405 NA29_RS16145 e64f07047ab8816818a1e5d09b61e76e 99 Pfam PF13663 Domain of unknown function (DUF4148) 1 65 1.1E-8 T 09-03-2017 IPR025421 Protein of unknown function DUF4148 NA29_RS11630 cb6c2b6a4112b4ebbbbec62bbe96f7cb 465 PIRSF PIRSF005348 25 465 1.4E-138 T 09-03-2017 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 NA29_RS11630 cb6c2b6a4112b4ebbbbec62bbe96f7cb 465 Pfam PF03390 2-hydroxycarboxylate transporter family 47 458 1.2E-139 T 09-03-2017 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 NA29_RS18435 547cab03b74f26d9bfab22343a679a1b 307 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 291 6.6E-53 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS17025 4356659333f4a8092a33524bc722fb63 141 SUPERFAMILY SSF51182 9 121 3.11E-21 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS17025 4356659333f4a8092a33524bc722fb63 141 Pfam PF07883 Cupin domain 53 116 5.8E-11 T 09-03-2017 IPR013096 Cupin 2, conserved barrel NA29_RS17025 4356659333f4a8092a33524bc722fb63 141 Gene3D G3DSA:2.60.120.10 19 126 3.8E-34 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS04895 2f74a5f40317e6afd7e79e1bae2bf634 84 Gene3D G3DSA:2.10.70.10 46 84 3.5E-17 T 09-03-2017 NA29_RS04895 2f74a5f40317e6afd7e79e1bae2bf634 84 Pfam PF10636 Hemin uptake protein hemP 48 84 4.2E-17 T 09-03-2017 IPR019600 Hemin uptake protein HemP NA29_RS03200 83397f964ad0e88478729e8ddb07c124 341 Pfam PF07063 Domain of unknown function (DUF1338) 45 337 4.5E-61 T 09-03-2017 IPR009770 Domain of unknown function DUF1338 NA29_RS03200 83397f964ad0e88478729e8ddb07c124 341 SMART SM01150 46 338 3.2E-85 T 09-03-2017 IPR009770 Domain of unknown function DUF1338 NA29_RS07020 b43206fe0a4cea244ebb6c8a6145e06f 436 SUPERFAMILY SSF103473 15 434 1.96E-86 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS07020 b43206fe0a4cea244ebb6c8a6145e06f 436 Pfam PF07690 Major Facilitator Superfamily 33 395 4.3E-47 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 NA29_RS07020 b43206fe0a4cea244ebb6c8a6145e06f 436 Gene3D G3DSA:1.20.1250.20 25 225 6.4E-45 T 09-03-2017 NA29_RS07020 b43206fe0a4cea244ebb6c8a6145e06f 436 Gene3D G3DSA:1.20.1250.20 245 433 7.2E-20 T 09-03-2017 NA29_RS17385 9071999237d09b03c1de1f0f6539327d 128 PRINTS PR00605 Class IC cytochrome C signature 30 41 2.5E-7 T 09-03-2017 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 NA29_RS17385 9071999237d09b03c1de1f0f6539327d 128 PRINTS PR00605 Class IC cytochrome C signature 71 93 2.5E-7 T 09-03-2017 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 NA29_RS17385 9071999237d09b03c1de1f0f6539327d 128 Gene3D G3DSA:1.10.760.10 18 122 9.3E-27 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS17385 9071999237d09b03c1de1f0f6539327d 128 SUPERFAMILY SSF46626 24 117 5.79E-24 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS17385 9071999237d09b03c1de1f0f6539327d 128 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 21 93 2.3E-13 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS12675 dff242c2a4fb863b0b9e8c36c0fccd93 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 259 6.9E-43 T 09-03-2017 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 NA29_RS12675 dff242c2a4fb863b0b9e8c36c0fccd93 266 SUPERFAMILY SSF52096 8 259 2.11E-65 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS12675 dff242c2a4fb863b0b9e8c36c0fccd93 266 Gene3D G3DSA:3.90.226.10 3 258 8.4E-63 T 09-03-2017 IPR029045 ClpP/crotonase-like domain NA29_RS06650 6af09e6a4085990e19c5340d852aad1f 188 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 13 147 6.1E-10 T 09-03-2017 IPR019587 Polyketide cyclase/dehydrase NA29_RS06650 6af09e6a4085990e19c5340d852aad1f 188 SUPERFAMILY SSF55961 10 139 6.29E-22 T 09-03-2017 NA29_RS06650 6af09e6a4085990e19c5340d852aad1f 188 Gene3D G3DSA:3.30.530.20 10 150 2.4E-15 T 09-03-2017 IPR023393 START-like domain NA29_RS09885 f2bc599211717f594c8f9c820370a687 241 Pfam PF11180 Protein of unknown function (DUF2968) 46 220 4.2E-69 T 09-03-2017 IPR021350 Protein of unknown function DUF2968 NA29_RS05005 33c08eb8851aa01fd0fa2f2b24bfe464 179 Pfam PF11937 Protein of unknown function (DUF3455) 38 177 1.5E-30 T 09-03-2017 IPR021851 Protein of unknown function DUF3455 NA29_RS24125 a07cdb6f25d1a5d3234eae3550cc3be1 335 PIRSF PIRSF018266 3 334 2.7E-91 T 09-03-2017 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component NA29_RS24125 a07cdb6f25d1a5d3234eae3550cc3be1 335 Pfam PF16220 Domain of unknown function (DUF4880) 13 53 2.1E-14 T 09-03-2017 IPR032623 FecR, N-terminal NA29_RS24125 a07cdb6f25d1a5d3234eae3550cc3be1 335 Pfam PF04773 FecR protein 115 216 5.2E-17 T 09-03-2017 IPR006860 FecR protein NA29_RS06085 662f34bfe04323abd407f30c5a6b0fd5 538 Gene3D G3DSA:2.60.40.1080 388 436 1.9E-12 T 09-03-2017 NA29_RS06085 662f34bfe04323abd407f30c5a6b0fd5 538 SUPERFAMILY SSF49373 384 436 1.61E-10 T 09-03-2017 IPR008964 Invasin/intimin cell-adhesion fragments NA29_RS06085 662f34bfe04323abd407f30c5a6b0fd5 538 Pfam PF02368 Bacterial Ig-like domain (group 2) 393 426 1.1E-5 T 09-03-2017 IPR003343 Bacterial Ig-like, group 2 NA29_RS24785 2c5b5d6af225c2c44a0d0277b88cc2b4 474 Pfam PF02120 Flagellar hook-length control protein FliK 355 429 1.7E-13 T 09-03-2017 IPR021136 Flagellar hook-length control protein-like, C-terminal NA29_RS24785 2c5b5d6af225c2c44a0d0277b88cc2b4 474 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1 16 - T 09-03-2017 IPR006162 Phosphopantetheine attachment site NA29_RS02755 4785c83d7960509485febd7187e65735 230 Gene3D G3DSA:2.60.450.10 38 190 1.1E-33 T 09-03-2017 NA29_RS02755 4785c83d7960509485febd7187e65735 230 Pfam PF03968 OstA-like protein 47 166 3.8E-27 T 09-03-2017 IPR005653 Organic solvent tolerance-like, N-terminal NA29_RS02755 4785c83d7960509485febd7187e65735 230 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 37 193 4.1E-39 T 09-03-2017 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 NA29_RS02755 4785c83d7960509485febd7187e65735 230 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 15 194 25.154 T 09-03-2017 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 NA29_RS24405 8c597fd4896ec9526585376c5a8a2b7f 435 Pfam PF03023 MviN-like protein 26 423 1.2E-25 T 09-03-2017 IPR004268 Peptidoglycan biosynthesis protein MurJ NA29_RS20990 e313a9e93ca15cb0b13fce671034a9ed 132 Pfam PF00355 Rieske [2Fe-2S] domain 29 91 1.2E-7 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS20990 e313a9e93ca15cb0b13fce671034a9ed 132 Gene3D G3DSA:2.102.10.10 4 102 1.4E-13 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS20990 e313a9e93ca15cb0b13fce671034a9ed 132 SUPERFAMILY SSF50022 4 102 1.03E-17 T 09-03-2017 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 NA29_RS12395 4cf0b1326c4fb57ecd23e38e8baac736 586 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 75 237 8.5E-20 T 09-03-2017 NA29_RS04210 a6b1d4c5441960ea7a1b49f7431881f1 438 Pfam PF00083 Sugar (and other) transporter 30 217 3.7E-18 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS04210 a6b1d4c5441960ea7a1b49f7431881f1 438 Pfam PF00083 Sugar (and other) transporter 236 410 5.4E-7 T 09-03-2017 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 NA29_RS04210 a6b1d4c5441960ea7a1b49f7431881f1 438 SUPERFAMILY SSF103473 28 430 1.44E-55 T 09-03-2017 IPR020846 Major facilitator superfamily domain NA29_RS04210 a6b1d4c5441960ea7a1b49f7431881f1 438 ProSitePatterns PS00216 Sugar transport proteins signature 1. 304 320 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 NA29_RS04210 a6b1d4c5441960ea7a1b49f7431881f1 438 Gene3D G3DSA:1.20.1250.20 26 227 3.4E-22 T 09-03-2017 NA29_RS04210 a6b1d4c5441960ea7a1b49f7431881f1 438 Gene3D G3DSA:1.20.1250.20 247 427 6.8E-17 T 09-03-2017 NA29_RS05725 bdfd17b660b0786f921a2f5d0baa3a10 213 Pfam PF13681 Type IV pilus assembly protein PilX C-term 100 162 1.1E-7 T 09-03-2017 IPR025205 PilX/PilW C-terminal domain NA29_RS11720 b180b2696396fcf864d2e274205192bd 154 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 9 151 5.7E-26 T 09-03-2017 IPR011747 Conserved hypothetical protein CHP02241 NA29_RS11720 b180b2696396fcf864d2e274205192bd 154 Pfam PF06841 T4-like virus tail tube protein gp19 13 149 1.5E-31 T 09-03-2017 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 NA29_RS17545 4c98b487d2584a466748e035cca511db 390 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 4.6E-121 T 09-03-2017 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 NA29_RS17545 4c98b487d2584a466748e035cca511db 390 SUPERFAMILY SSF48452 308 384 1.29E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS17545 4c98b487d2584a466748e035cca511db 390 SUPERFAMILY SSF48452 91 141 1.29E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS17545 4c98b487d2584a466748e035cca511db 390 Pfam PF07219 HemY protein N-terminus 26 131 6.2E-30 T 09-03-2017 IPR010817 HemY, N-terminal NA29_RS17545 4c98b487d2584a466748e035cca511db 390 Gene3D G3DSA:1.25.40.10 261 385 1.6E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS15430 6c4b8804c086b9ef59bf7a9d76af9183 391 Pfam PF05762 VWA domain containing CoxE-like protein 185 273 1.8E-8 T 09-03-2017 IPR008912 Uncharacterised protein family CoxE-like NA29_RS04330 f568c28f2342e334ab55eb555937bfdd 157 Gene3D G3DSA:1.25.40.10 35 148 3.5E-13 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS04330 f568c28f2342e334ab55eb555937bfdd 157 SUPERFAMILY SSF48452 33 152 5.06E-14 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS20185 b21f059a64cb10cd1483efbad1d9ead3 170 Pfam PF04449 CS1 type fimbrial major subunit 27 163 7.0E-25 T 09-03-2017 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 NA29_RS05560 cafd8621f464865e4ae4e4e75623bc62 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 104 3.3E-25 T 09-03-2017 IPR008407 Branched-chain amino acid transport, AzlD NA29_RS05980 2d4647b6c7f45775c355f5425290516c 221 Pfam PF01810 LysE type translocator 22 207 9.7E-26 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS12710 6a433d946e14072aa9f20b0d48037a95 253 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 11 221 3.6E-35 T 09-03-2017 IPR008775 Phytanoyl-CoA dioxygenase NA29_RS12710 6a433d946e14072aa9f20b0d48037a95 253 Gene3D G3DSA:2.60.120.620 2 244 1.9E-54 T 09-03-2017 NA29_RS12710 6a433d946e14072aa9f20b0d48037a95 253 SUPERFAMILY SSF51197 2 241 1.44E-52 T 09-03-2017 NA29_RS03400 751f72131f3d72ea1febb47c28841259 164 SUPERFAMILY SSF143744 19 150 1.44E-33 T 09-03-2017 NA29_RS03400 751f72131f3d72ea1febb47c28841259 164 Pfam PF03928 Haem-degrading 25 148 1.1E-30 T 09-03-2017 IPR005624 Haem-degrading NA29_RS22790 d226f0a65007c49243d4e5370e022c7a 85 Pfam PF04226 Transglycosylase associated protein 33 80 7.5E-15 T 09-03-2017 IPR007341 Transglycosylase-associated protein GO:0016021 NA29_RS22790 d226f0a65007c49243d4e5370e022c7a 85 Gene3D G3DSA:1.10.3470.10 3 75 1.7E-4 T 09-03-2017 IPR029022 ABC transporter, BtuC-like NA29_RS05990 ebc0f01b8d334fafc774be37268c646f 418 Gene3D G3DSA:1.10.760.10 121 220 3.4E-17 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS05990 ebc0f01b8d334fafc774be37268c646f 418 SUPERFAMILY SSF46626 109 220 1.1E-19 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS05990 ebc0f01b8d334fafc774be37268c646f 418 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 131 215 6.1E-14 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS21455 a468234850a6beef3bfe324c468e4bee 108 Pfam PF00893 Small Multidrug Resistance protein 1 92 4.8E-24 T 09-03-2017 IPR000390 Small multidrug resistance protein family GO:0016021 NA29_RS21455 a468234850a6beef3bfe324c468e4bee 108 SUPERFAMILY SSF103481 4 104 2.62E-15 T 09-03-2017 NA29_RS08460 828b06d228bf616a82a86d86f21a128b 145 Pfam PF05899 Protein of unknown function (DUF861) 57 125 4.1E-7 T 09-03-2017 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 NA29_RS08460 828b06d228bf616a82a86d86f21a128b 145 Gene3D G3DSA:2.60.120.10 51 136 4.3E-18 T 09-03-2017 IPR014710 RmlC-like jelly roll fold NA29_RS08460 828b06d228bf616a82a86d86f21a128b 145 SUPERFAMILY SSF51182 44 135 1.73E-9 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS04795 ae0f88bb552cebf0f973564b60a79057 266 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 10 258 2.8E-59 T 09-03-2017 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 NA29_RS04795 ae0f88bb552cebf0f973564b60a79057 266 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 184 206 6.1E-23 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NA29_RS04795 ae0f88bb552cebf0f973564b60a79057 266 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 83 102 6.1E-23 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NA29_RS04795 ae0f88bb552cebf0f973564b60a79057 266 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 206 225 6.1E-23 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NA29_RS04795 ae0f88bb552cebf0f973564b60a79057 266 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 23 44 6.1E-23 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NA29_RS04795 ae0f88bb552cebf0f973564b60a79057 266 Pfam PF01311 Bacterial export proteins, family 1 16 242 5.2E-49 T 09-03-2017 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 NA29_RS09560 2d28586924544bd92a6dce87814c441a 114 Gene3D G3DSA:1.10.260.40 20 83 3.0E-4 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS18040 aadd53005445be1238b08c75edcfe5e1 77 Pfam PF13986 Domain of unknown function (DUF4224) 13 57 1.1E-16 T 09-03-2017 IPR025319 Domain of unknown function DUF4224 NA29_RS01100 e413073a9230bc0bac02c86c5ebae2b0 139 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 17 138 28.056 T 09-03-2017 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 NA29_RS01100 e413073a9230bc0bac02c86c5ebae2b0 139 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 102 126 - T 09-03-2017 IPR020458 Zinc finger, DksA/TraR C4-type conserved site NA29_RS01100 e413073a9230bc0bac02c86c5ebae2b0 139 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 97 131 9.9E-11 T 09-03-2017 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 NA29_RS01100 e413073a9230bc0bac02c86c5ebae2b0 139 SUPERFAMILY SSF109635 5 98 1.83E-29 T 09-03-2017 NA29_RS01100 e413073a9230bc0bac02c86c5ebae2b0 139 SUPERFAMILY SSF57716 99 137 2.57E-8 T 09-03-2017 NA29_RS01100 e413073a9230bc0bac02c86c5ebae2b0 139 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 21 129 8.4E-43 T 09-03-2017 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 NA29_RS02555 61a7aa7b48b0556ee8eb908c20d351fd 67 Pfam PF11137 Protein of unknown function (DUF2909) 1 60 7.5E-26 T 09-03-2017 IPR021313 Protein of unknown function DUF2909 NA29_RS24080 403eeedfe90bfc43636c6ebb1a0c0ded 254 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 152 183 2.3E-4 T 09-03-2017 IPR002654 Glycosyl transferase, family 25 NA29_RS24080 403eeedfe90bfc43636c6ebb1a0c0ded 254 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 13 116 3.2E-23 T 09-03-2017 IPR002654 Glycosyl transferase, family 25 NA29_RS24080 403eeedfe90bfc43636c6ebb1a0c0ded 254 SUPERFAMILY SSF53448 82 205 8.16E-5 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS12360 d8cd737dee195ca276371a31e30295de 707 Gene3D G3DSA:3.40.50.1820 391 543 5.3E-21 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS12360 d8cd737dee195ca276371a31e30295de 707 Gene3D G3DSA:3.40.50.1820 603 670 5.3E-21 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS12360 d8cd737dee195ca276371a31e30295de 707 SUPERFAMILY SSF53474 388 655 1.13E-22 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS09060 9b72a8165703d420e22944fe315e494b 197 Pfam PF06271 RDD family 42 188 2.8E-19 T 09-03-2017 IPR010432 RDD NA29_RS00725 757b3cc9ddffea442b4b4fddb6425a95 286 Gene3D G3DSA:3.30.2010.10 56 146 3.6E-34 T 09-03-2017 NA29_RS00725 757b3cc9ddffea442b4b4fddb6425a95 286 Pfam PF01435 Peptidase family M48 68 278 3.8E-38 T 09-03-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 NA29_RS00725 757b3cc9ddffea442b4b4fddb6425a95 286 Hamap MF_00188 Protease HtpX [htpX]. 4 278 29.25 T 09-03-2017 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 NA29_RS08765 9f316ee165911fe0ca6f6adaa0da0894 122 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 50 1.2E-16 T 09-03-2017 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain NA29_RS08765 9f316ee165911fe0ca6f6adaa0da0894 122 SMART SM00834 1 41 1.4E-14 T 09-03-2017 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain NA29_RS08765 9f316ee165911fe0ca6f6adaa0da0894 122 Pfam PF09723 Zinc ribbon domain 1 40 2.1E-12 T 09-03-2017 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain NA29_RS10485 4ee27b077389b89fdbdf5bdf294394f4 104 Pfam PF16290 Domain of unknown function (DUF4936) 4 94 1.1E-22 T 09-03-2017 IPR032556 Protein of unknown function DUF4936 NA29_RS12035 e39ba42901be21a4b9979e39775ebe45 435 Pfam PF01566 Natural resistance-associated macrophage protein 46 410 2.9E-73 T 09-03-2017 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 NA29_RS16680 2bb8cd95eb3d09e1895348d8974b46c3 361 Gene3D G3DSA:2.40.160.10 25 361 1.9E-76 T 09-03-2017 IPR023614 Porin domain NA29_RS16680 2bb8cd95eb3d09e1895348d8974b46c3 361 Pfam PF13609 Gram-negative porin 9 330 4.6E-38 T 09-03-2017 NA29_RS16680 2bb8cd95eb3d09e1895348d8974b46c3 361 SUPERFAMILY SSF56935 24 361 9.16E-66 T 09-03-2017 NA29_RS16680 2bb8cd95eb3d09e1895348d8974b46c3 361 PRINTS PR00184 Neisseria sp. porin signature 157 174 4.2E-12 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS16680 2bb8cd95eb3d09e1895348d8974b46c3 361 PRINTS PR00184 Neisseria sp. porin signature 55 80 4.2E-12 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS16680 2bb8cd95eb3d09e1895348d8974b46c3 361 PRINTS PR00184 Neisseria sp. porin signature 305 329 4.2E-12 T 09-03-2017 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 NA29_RS11170 c7251c1c2181889cd7f79443c64a0057 165 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 13 160 6.5E-22 T 09-03-2017 IPR018681 Protein of unknown function DUF2165, transmembrane NA29_RS06870 77e5cdce3b654283f1eedd0dc7bbd02d 221 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 13 214 1.1E-95 T 09-03-2017 IPR008517 Protein of unknown function DUF799 NA29_RS12090 8491c189e94097834acae5868941cd8c 277 Gene3D G3DSA:3.20.20.370 72 240 1.8E-23 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 NA29_RS12090 8491c189e94097834acae5868941cd8c 277 SUPERFAMILY SSF88713 61 235 1.28E-32 T 09-03-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 NA29_RS12090 8491c189e94097834acae5868941cd8c 277 Pfam PF01522 Polysaccharide deacetylase 99 233 8.2E-22 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 NA29_RS01085 617e8fc916766ed191b27592ef406a21 290 SUPERFAMILY SSF103481 45 144 9.15E-14 T 09-03-2017 NA29_RS01085 617e8fc916766ed191b27592ef406a21 290 SUPERFAMILY SSF103481 208 289 2.09E-9 T 09-03-2017 NA29_RS01085 617e8fc916766ed191b27592ef406a21 290 Pfam PF00892 EamA-like transporter family 5 139 5.9E-8 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS02760 995fc67e992b45e18dbb50abba851b45 225 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 11 190 1.6E-45 T 09-03-2017 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 NA29_RS02760 995fc67e992b45e18dbb50abba851b45 225 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 15 190 4.6E-37 T 09-03-2017 IPR010664 Lipopolysaccharide assembly, LptC-related NA29_RS21790 24ce734eb590d06e8a0f07ccf1c495f6 327 Gene3D G3DSA:3.40.50.720 3 225 6.2E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS21790 24ce734eb590d06e8a0f07ccf1c495f6 327 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 245 2.1E-29 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 NA29_RS21790 24ce734eb590d06e8a0f07ccf1c495f6 327 SUPERFAMILY SSF51735 3 312 4.47E-59 T 09-03-2017 IPR016040 NAD(P)-binding domain NA29_RS16265 1b7b797821abb7bb5295d2a44e3298fe 287 SUPERFAMILY SSF53474 44 286 2.23E-57 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS16265 1b7b797821abb7bb5295d2a44e3298fe 287 Pfam PF00561 alpha/beta hydrolase fold 67 178 4.7E-17 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS16265 1b7b797821abb7bb5295d2a44e3298fe 287 Gene3D G3DSA:3.40.50.1820 46 286 1.6E-55 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS15240 af3062a549431702d65d2dc7b4cb45bc 417 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 417 2.0E-148 T 09-03-2017 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 NA29_RS15240 af3062a549431702d65d2dc7b4cb45bc 417 Pfam PF12704 MacB-like periplasmic core domain 30 245 3.8E-21 T 09-03-2017 IPR025857 MacB-like periplasmic core domain NA29_RS15240 af3062a549431702d65d2dc7b4cb45bc 417 Pfam PF02687 FtsX-like permease family 277 410 5.2E-16 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 NA29_RS23540 22a0ecec3529f6cd88c22bc7b980c049 179 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 147 9.6E-60 T 09-03-2017 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 NA29_RS23540 22a0ecec3529f6cd88c22bc7b980c049 179 Pfam PF02470 MlaD protein 39 116 8.2E-24 T 09-03-2017 IPR003399 Mce/MlaD NA29_RS06865 4e1001bc7651af541dd4b21a03c6e751 135 Pfam PF06191 Protein of unknown function (DUF995) 43 99 2.5E-5 T 09-03-2017 IPR009337 Protein of unknown function DUF995 NA29_RS03210 8ed1a3b13b754a0f940e5ec036e87669 215 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 28 203 1.2E-29 T 09-03-2017 IPR003740 Uncharacterised membrane protein YitT NA29_RS09825 02f658b9829d454cb44d90f8e02a7aa1 158 Pfam PF01478 Type IV leader peptidase family 4 107 1.0E-9 T 09-03-2017 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 NA29_RS08315 415ccfd1c76145e8764a9fd148f29911 203 Pfam PF01292 Prokaryotic cytochrome b561 18 203 1.2E-24 T 09-03-2017 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 NA29_RS08315 415ccfd1c76145e8764a9fd148f29911 203 SUPERFAMILY SSF81342 18 203 7.14E-27 T 09-03-2017 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 NA29_RS07165 90367df35834882f490883cf576c2eec 2689 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 92 129 1.9E-5 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07165 90367df35834882f490883cf576c2eec 2689 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 287 308 0.24 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07165 90367df35834882f490883cf576c2eec 2689 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 35 67 0.0014 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07165 90367df35834882f490883cf576c2eec 2689 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 391 426 2.3 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07165 90367df35834882f490883cf576c2eec 2689 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 992 1026 1.9 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07165 90367df35834882f490883cf576c2eec 2689 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 314 347 0.16 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07165 90367df35834882f490883cf576c2eec 2689 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 69 107 7.2E-4 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07165 90367df35834882f490883cf576c2eec 2689 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 354 392 4.1E-4 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07165 90367df35834882f490883cf576c2eec 2689 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1324 1361 0.0019 T 09-03-2017 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat NA29_RS07165 90367df35834882f490883cf576c2eec 2689 Pfam PF13332 Haemagluttinin repeat 1899 2071 7.6E-41 T 09-03-2017 IPR025157 Haemagluttinin repeat NA29_RS07165 90367df35834882f490883cf576c2eec 2689 Pfam PF13332 Haemagluttinin repeat 1478 1657 8.4E-6 T 09-03-2017 IPR025157 Haemagluttinin repeat NA29_RS07165 90367df35834882f490883cf576c2eec 2689 Pfam PF13332 Haemagluttinin repeat 1429 1470 0.007 T 09-03-2017 IPR025157 Haemagluttinin repeat NA29_RS07165 90367df35834882f490883cf576c2eec 2689 Pfam PF13332 Haemagluttinin repeat 1671 1824 4.5E-11 T 09-03-2017 IPR025157 Haemagluttinin repeat NA29_RS00770 6c01818aa1f746be89507ec2ea69684a 141 SUPERFAMILY SSF75169 29 141 2.2E-24 T 09-03-2017 IPR027396 DsrEFH-like NA29_RS00770 6c01818aa1f746be89507ec2ea69684a 141 Gene3D G3DSA:3.40.1260.10 28 141 7.8E-34 T 09-03-2017 IPR027396 DsrEFH-like NA29_RS00770 6c01818aa1f746be89507ec2ea69684a 141 Pfam PF02635 DsrE/DsrF-like family 43 141 1.1E-15 T 09-03-2017 IPR003787 Sulphur relay, DsrE/F-like protein NA29_RS22085 d4d51bb28f336fb8de47817aafa29fbe 259 Pfam PF04355 SmpA / OmlA family 67 137 1.3E-25 T 09-03-2017 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 NA29_RS22085 d4d51bb28f336fb8de47817aafa29fbe 259 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 27 182 28.499 T 09-03-2017 IPR026592 Outer membrane protein assembly factor BamE NA29_RS11260 0871131672a32e0add0c2e1e29c4b595 167 Pfam PF12306 Inclusion body protein 3 164 2.4E-58 T 09-03-2017 IPR021087 Uncharacterised protein family PixA/AidA NA29_RS21380 20a01fb06a1a81aa7d6e58506aad3bc5 397 Gene3D G3DSA:3.40.50.2300 16 214 2.0E-37 T 09-03-2017 NA29_RS21380 20a01fb06a1a81aa7d6e58506aad3bc5 397 SUPERFAMILY SSF53822 16 390 1.35E-85 T 09-03-2017 IPR028082 Periplasmic binding protein-like I NA29_RS21380 20a01fb06a1a81aa7d6e58506aad3bc5 397 Pfam PF13458 Periplasmic binding protein 16 355 9.2E-87 T 09-03-2017 IPR028081 Leucine-binding protein domain NA29_RS22685 a6460e76dc81581be206a10b9ddb0dde 231 SMART SM01118 2 228 8.7E-31 T 09-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 NA29_RS22685 a6460e76dc81581be206a10b9ddb0dde 231 Pfam PF01928 CYTH domain 3 222 1.3E-22 T 09-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 NA29_RS22685 a6460e76dc81581be206a10b9ddb0dde 231 SUPERFAMILY SSF55154 1 227 2.45E-34 T 09-03-2017 IPR033469 CYTH-like domain Reactome: R-HSA-196819 NA29_RS22685 a6460e76dc81581be206a10b9ddb0dde 231 Gene3D G3DSA:2.40.320.10 1 227 9.3E-30 T 09-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 NA29_RS17900 9bfc060db84b81fa801f1f09e6cea245 189 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 44 171 2.1E-27 T 09-03-2017 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component NA29_RS23690 9f76e6e88fdce0c6213822a6972894bf 216 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 11 213 24.667 T 09-03-2017 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 NA29_RS23690 9f76e6e88fdce0c6213822a6972894bf 216 Pfam PF01794 Ferric reductase like transmembrane component 59 172 2.7E-15 T 09-03-2017 IPR013130 Ferric reductase transmembrane component-like domain NA29_RS14285 205dc96f9f10cf9ebdeba51a79d03977 227 Gene3D G3DSA:3.40.109.10 128 225 3.6E-49 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 NA29_RS14285 205dc96f9f10cf9ebdeba51a79d03977 227 Gene3D G3DSA:3.40.109.10 6 96 3.6E-49 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 NA29_RS14285 205dc96f9f10cf9ebdeba51a79d03977 227 Pfam PF00881 Nitroreductase family 10 202 2.2E-36 T 09-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 NA29_RS14285 205dc96f9f10cf9ebdeba51a79d03977 227 SUPERFAMILY SSF55469 6 225 1.7E-49 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 NA29_RS12310 b18e1df1b63407b7e4a9407cf9144dcd 516 Pfam PF03413 Peptidase propeptide and YPEB domain 366 405 0.0067 T 09-03-2017 IPR025711 PepSY domain NA29_RS12310 b18e1df1b63407b7e4a9407cf9144dcd 516 Pfam PF03929 PepSY-associated TM region 30 460 4.7E-63 T 09-03-2017 IPR005625 PepSY-associated TM protein NA29_RS24255 59381e69117ddabce338fdf84b2ebb42 317 Pfam PF01758 Sodium Bile acid symporter family 37 213 8.1E-39 T 09-03-2017 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 NA29_RS00405 3f77a14b2f4ef2753c64d9cf22b4aee0 121 Pfam PF10052 Protein of unknown function (DUF2288) 28 116 1.1E-31 T 09-03-2017 IPR018741 Protein of unknown function DUF2288 NA29_RS09980 a215c0c1b41fac1ea479611b60521b3c 388 SUPERFAMILY SSF56112 67 195 3.95E-5 T 09-03-2017 IPR011009 Protein kinase-like domain NA29_RS05285 e130c5c94c852a579c5f832aee5d5c9b 144 Pfam PF13211 Protein of unknown function (DUF4019) 38 141 4.0E-34 T 09-03-2017 IPR025091 Protein of unknown function DUF4019 NA29_RS02185 eeb6eea5031ac27fb0ffeeade9d8e9ba 195 Pfam PF01810 LysE type translocator 14 193 1.6E-22 T 09-03-2017 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 NA29_RS08350 ee401847522ecf1b5b378f3ae6bb4abb 85 TIGRFAM TIGR03510 XapX: XapX domain 10 57 2.1E-19 T 09-03-2017 IPR020017 XapX domain NA29_RS21575 82582f0e17144f180eaaa8a9ae79cec2 222 SUPERFAMILY SSF53335 1 185 7.67E-42 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS21575 82582f0e17144f180eaaa8a9ae79cec2 222 SMART SM00650 71 202 4.8E-4 T 09-03-2017 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 NA29_RS21575 82582f0e17144f180eaaa8a9ae79cec2 222 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 203 2.5E-35 T 09-03-2017 NA29_RS21575 82582f0e17144f180eaaa8a9ae79cec2 222 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 138 153 - T 09-03-2017 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 NA29_RS21575 82582f0e17144f180eaaa8a9ae79cec2 222 Gene3D G3DSA:3.40.50.150 2 209 2.2E-50 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS11255 c9718d4a3a803eaae64fa941964ad090 177 Pfam PF12306 Inclusion body protein 20 176 9.2E-12 T 09-03-2017 IPR021087 Uncharacterised protein family PixA/AidA NA29_RS09670 75759846410577667eafb2160d39b942 161 Pfam PF10721 Protein of unknown function (DUF2514) 10 157 2.6E-17 T 09-03-2017 IPR019659 Protein of unknown function DUF2514 NA29_RS05015 41f36a41510de3f6261fca4859ea3a23 231 Pfam PF10099 Anti-sigma-K factor rskA 63 224 2.6E-22 T 09-03-2017 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 NA29_RS21590 48f0163d944410c7495975315f4acce4 435 SUPERFAMILY SSF53756 56 420 9.71E-12 T 09-03-2017 NA29_RS21590 48f0163d944410c7495975315f4acce4 435 Gene3D G3DSA:3.40.50.2000 267 404 3.8E-7 T 09-03-2017 NA29_RS21590 48f0163d944410c7495975315f4acce4 435 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 211 1.3E-64 T 09-03-2017 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 NA29_RS18715 aebc1d846d93f48a719c33d64831ed05 226 Pfam PF13360 PQQ-like domain 50 223 1.0E-5 T 09-03-2017 IPR002372 Pyrrolo-quinoline quinone repeat NA29_RS18715 aebc1d846d93f48a719c33d64831ed05 226 SUPERFAMILY SSF50969 28 224 1.41E-23 T 09-03-2017 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like NA29_RS18715 aebc1d846d93f48a719c33d64831ed05 226 Gene3D G3DSA:2.130.10.10 48 221 1.6E-15 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 NA29_RS02125 e1ee0ec9166b42e319a61279f2a9a363 366 Gene3D G3DSA:3.20.20.330 18 354 1.7E-117 T 09-03-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 NA29_RS02125 e1ee0ec9166b42e319a61279f2a9a363 366 SUPERFAMILY SSF82282 24 352 6.67E-99 T 09-03-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 NA29_RS02125 e1ee0ec9166b42e319a61279f2a9a363 366 Pfam PF02574 Homocysteine S-methyltransferase 32 340 3.6E-90 T 09-03-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 NA29_RS02135 c8ae13b05710d99d3c325640ca34370c 85 Pfam PF12091 Protein of unknown function (DUF3567) 1 85 2.4E-35 T 09-03-2017 IPR021951 Protein of unknown function DUF3567 NA29_RS11030 596e4fa11641790435e41b346ce231c6 171 Pfam PF04657 Putative inner membrane exporter, YdcZ 12 149 9.0E-41 T 09-03-2017 IPR006750 Putative inner membrane exporter, YdcZ NA29_RS21285 cb5ac314319fac2278f01c3f824d2168 187 Pfam PF13689 Domain of unknown function (DUF4154) 46 182 4.8E-36 T 09-03-2017 IPR025293 Protein of unknown function DUF4154 NA29_RS11750 bc826484735cae2e86c2ecb8d7c9de1a 1279 Pfam PF04865 Baseplate J-like protein 968 1141 2.3E-5 T 09-03-2017 IPR006949 Baseplate protein J-like NA29_RS12065 0027fb40102b28023fa6907d0b111709 417 Pfam PF13194 Domain of unknown function (DUF4010) 177 386 6.7E-46 T 09-03-2017 IPR025105 Domain of unknown function DUF4010 NA29_RS12065 0027fb40102b28023fa6907d0b111709 417 Pfam PF02308 MgtC family 12 128 2.7E-13 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 NA29_RS15200 4f8eda8f776e83c72e5f8bcff0b6e9bf 141 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 32.676 T 09-03-2017 IPR023081 Cell division protein FtsB NA29_RS15200 4f8eda8f776e83c72e5f8bcff0b6e9bf 141 Pfam PF04977 Septum formation initiator 11 88 5.7E-25 T 09-03-2017 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 NA29_RS04995 64b98b6f880a94fb6783d714059b6514 182 Pfam PF16036 Chalcone isomerase-like 51 180 1.0E-13 T 09-03-2017 IPR016087 Chalcone isomerase GO:0016872 NA29_RS24415 55a569b9e0c388b879af5430b1b0edb5 377 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 89 337 2.2E-23 T 09-03-2017 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 NA29_RS24415 55a569b9e0c388b879af5430b1b0edb5 377 SUPERFAMILY SSF53756 6 368 2.1E-54 T 09-03-2017 NA29_RS24415 55a569b9e0c388b879af5430b1b0edb5 377 Gene3D G3DSA:3.40.50.2000 193 367 1.1E-41 T 09-03-2017 NA29_RS24415 55a569b9e0c388b879af5430b1b0edb5 377 Gene3D G3DSA:3.40.50.2000 6 171 2.2E-7 T 09-03-2017 NA29_RS07930 5f8e1eef6f67bffed3a62a4aa1e2f6a7 287 Pfam PF02535 ZIP Zinc transporter 94 254 3.2E-29 T 09-03-2017 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 NA29_RS24835 b3e225785115888a7b02a58d39e87c2d 486 PRINTS PR01007 Flagellar hook-length control protein signature 126 143 3.4E-15 T 09-03-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 NA29_RS24835 b3e225785115888a7b02a58d39e87c2d 486 PRINTS PR01007 Flagellar hook-length control protein signature 397 420 3.4E-15 T 09-03-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 NA29_RS24835 b3e225785115888a7b02a58d39e87c2d 486 PRINTS PR01007 Flagellar hook-length control protein signature 339 361 3.4E-15 T 09-03-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 NA29_RS24835 b3e225785115888a7b02a58d39e87c2d 486 PRINTS PR01007 Flagellar hook-length control protein signature 364 382 3.4E-15 T 09-03-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 NA29_RS24835 b3e225785115888a7b02a58d39e87c2d 486 PRINTS PR01007 Flagellar hook-length control protein signature 382 397 3.4E-15 T 09-03-2017 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 NA29_RS24835 b3e225785115888a7b02a58d39e87c2d 486 Pfam PF02120 Flagellar hook-length control protein FliK 349 431 5.7E-21 T 09-03-2017 IPR021136 Flagellar hook-length control protein-like, C-terminal NA29_RS13945 ef2a3d79efd5ed4fde16d5810409e64a 360 Pfam PF01699 Sodium/calcium exchanger protein 35 187 3.8E-18 T 09-03-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 NA29_RS13945 ef2a3d79efd5ed4fde16d5810409e64a 360 Pfam PF01699 Sodium/calcium exchanger protein 216 358 2.3E-14 T 09-03-2017 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 NA29_RS15405 81d8989492bcb259be7e72ce412db491 286 SUPERFAMILY SSF103481 185 281 5.1E-18 T 09-03-2017 NA29_RS15405 81d8989492bcb259be7e72ce412db491 286 SUPERFAMILY SSF103481 34 135 2.62E-19 T 09-03-2017 NA29_RS15405 81d8989492bcb259be7e72ce412db491 286 Pfam PF00892 EamA-like transporter family 2 132 1.2E-18 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS15405 81d8989492bcb259be7e72ce412db491 286 Pfam PF00892 EamA-like transporter family 140 278 3.5E-22 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS17015 cb204d72e0b7e9a8345bc824d53033fa 137 SUPERFAMILY SSF54593 1 129 2.06E-20 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS17015 cb204d72e0b7e9a8345bc824d53033fa 137 Gene3D G3DSA:3.10.180.10 2 136 5.2E-24 T 09-03-2017 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase NA29_RS00020 5b7ce3fe190617435f0f5296d53010b8 221 SUPERFAMILY SSF48150 111 193 2.04E-7 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 NA29_RS09800 e63b5d58c003fccd1ee1e3c2b7a0bb59 398 Pfam PF15984 Bacterial collagen, middle region 73 275 3.4E-50 T 09-03-2017 IPR031929 Bacterial collagen-like protein, middle domain NA29_RS02195 2e21eada1a4054d51c90963f8b7eb508 198 Pfam PF16036 Chalcone isomerase-like 56 193 1.4E-9 T 09-03-2017 IPR016087 Chalcone isomerase GO:0016872 NA29_RS10720 c2c004792d203dba7d0dba82605150c9 63 Pfam PF11177 Protein of unknown function (DUF2964) 4 61 1.0E-18 T 09-03-2017 IPR021347 Protein of unknown function DUF2964 NA29_RS12725 94e46fd53c70dd1eae478b78b7ee316d 77 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 5 66 1.0E-27 T 09-03-2017 IPR021074 Formate dehydrogenase, delta subunit NA29_RS12530 ab94acdcceb0404f925d171d13d245e6 188 Pfam PF01638 HxlR-like helix-turn-helix 20 105 2.1E-21 T 09-03-2017 IPR002577 Helix-turn-helix, HxlR type NA29_RS12530 ab94acdcceb0404f925d171d13d245e6 188 SUPERFAMILY SSF46785 6 140 1.22E-38 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS12530 ab94acdcceb0404f925d171d13d245e6 188 Gene3D G3DSA:1.10.10.10 1 109 2.5E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS20925 e154bcf37b98e3e6175d83b9864c599e 229 SUPERFAMILY SSF89069 13 80 5.75E-14 T 09-03-2017 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 NA29_RS20925 e154bcf37b98e3e6175d83b9864c599e 229 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 13 96 1.5E-16 T 09-03-2017 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 NA29_RS10605 52b504d5f53ccc53a690e8d8fd97e1d3 847 Pfam PF00577 Outer membrane usher protein 236 412 7.5E-7 T 09-03-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10605 52b504d5f53ccc53a690e8d8fd97e1d3 847 Pfam PF00577 Outer membrane usher protein 550 709 1.9E-15 T 09-03-2017 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 NA29_RS10605 52b504d5f53ccc53a690e8d8fd97e1d3 847 Pfam PF13953 PapC C-terminal domain 720 780 2.3E-10 T 09-03-2017 IPR025949 PapC-like, C-terminal domain NA29_RS05110 b46cfa1d78aad3905e873fffef2f2bfc 137 Pfam PF07681 DoxX 18 93 1.2E-13 T 09-03-2017 IPR032808 DoxX family NA29_RS16325 5fcc5e409a01c272e08b04eefe843c5e 228 Pfam PF04403 Paraquat-inducible protein A 51 202 4.1E-47 T 09-03-2017 IPR007498 Paraquat-inducible protein A NA29_RS23170 3db084b941a3260374ebe255d6e0a49b 589 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 14 67 4.0E-21 T 09-03-2017 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 NA29_RS23170 3db084b941a3260374ebe255d6e0a49b 589 Pfam PF03237 Terminase-like family 161 572 1.9E-104 T 09-03-2017 IPR004921 Terminase, large subunit NA29_RS23170 3db084b941a3260374ebe255d6e0a49b 589 Gene3D G3DSA:1.10.10.60 17 71 5.4E-4 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 NA29_RS09875 762ee851252e6605f0071f1ecadc99ba 701 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 28 73 8.6E-10 T 09-03-2017 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal NA29_RS15470 4dc2907b0833ac9dafec6b5b0873e876 123 Pfam PF11142 Protein of unknown function (DUF2917) 7 67 5.0E-21 T 09-03-2017 IPR021317 Protein of unknown function DUF2917 NA29_RS15470 4dc2907b0833ac9dafec6b5b0873e876 123 SUPERFAMILY SSF51182 27 73 6.58E-5 T 09-03-2017 IPR011051 RmlC-like cupin domain NA29_RS16540 f17d14f09205ce107203a1bd18fd7ad5 133 Pfam PF12779 YXWGXW repeat (2 copies) 68 86 4.6E-4 T 09-03-2017 IPR024447 YXWGXW repeat NA29_RS05735 c9dcd429f1a883ca8c4c41365dea544b 182 Pfam PF11780 Protein of unknown function (DUF3318) 24 156 8.6E-15 T 09-03-2017 IPR021751 Protein of unknown function DUF3318 NA29_RS20650 2723d6870e94ab2fb98bbbb90f6e8825 189 Pfam PF02417 Chromate transporter 4 159 2.9E-28 T 09-03-2017 IPR003370 Chromate transporter GO:0015109|GO:0015703 NA29_RS23935 6adc22316a58ac1d34d3705d2eae3005 150 Pfam PF03625 Domain of unknown function DUF302 54 116 1.6E-16 T 09-03-2017 IPR005180 Domain of unknown function DUF302 NA29_RS23935 6adc22316a58ac1d34d3705d2eae3005 150 SUPERFAMILY SSF103247 26 141 3.66E-25 T 09-03-2017 IPR005180 Domain of unknown function DUF302 NA29_RS23935 6adc22316a58ac1d34d3705d2eae3005 150 Gene3D G3DSA:3.30.310.70 25 122 8.8E-25 T 09-03-2017 IPR005180 Domain of unknown function DUF302 NA29_RS09115 702c9487df20df6b109494becd2a14cd 154 Pfam PF04224 Protein of unknown function, DUF417 6 136 9.9E-15 T 09-03-2017 IPR007339 Protein of unknown function DUF417 NA29_RS09115 702c9487df20df6b109494becd2a14cd 154 PIRSF PIRSF028065 2 141 4.4E-27 T 09-03-2017 IPR016865 Uncharacterised conserved protein UCP028065, membrane NA29_RS06845 22c3bcb64c6c94052d9caf71fd99fcc3 272 SUPERFAMILY SSF56219 6 249 4.71E-47 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase NA29_RS06845 22c3bcb64c6c94052d9caf71fd99fcc3 272 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 11 242 3.6E-20 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase NA29_RS06845 22c3bcb64c6c94052d9caf71fd99fcc3 272 Gene3D G3DSA:3.60.10.10 8 183 4.9E-16 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase NA29_RS04165 ed5e7a8672b32b728c9e6484a627a200 223 Pfam PF02677 Uncharacterized BCR, COG1636 19 193 6.3E-64 T 09-03-2017 IPR003828 Protein of unknown function DUF208 NA29_RS23305 bdfc42318402aeea847a434ddaf1a68a 212 Pfam PF06995 Phage P2 GpU 6 124 3.0E-38 T 09-03-2017 IPR009734 Myoviridae, GpU NA29_RS20075 6745d099bb82e587f012496cd02989df 457 Pfam PF02601 Exonuclease VII, large subunit 134 443 1.7E-98 T 09-03-2017 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 NA29_RS20075 6745d099bb82e587f012496cd02989df 457 Pfam PF13742 OB-fold nucleic acid binding domain 18 110 1.2E-28 T 09-03-2017 IPR025824 OB-fold nucleic acid binding domain GO:0003676 NA29_RS20075 6745d099bb82e587f012496cd02989df 457 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 15 447 27.938 T 09-03-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 NA29_RS20075 6745d099bb82e587f012496cd02989df 457 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 19 353 1.6E-129 T 09-03-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 NA29_RS23190 aeb852c728e416eb85a21ff6613a03d9 160 Pfam PF05926 Phage head completion protein (GPL) 16 160 3.6E-47 T 09-03-2017 IPR009225 Bacteriophage head completion protein GpL GO:0019069 NA29_RS16240 6188793096840728c1f253e6ad9e5869 71 SUPERFAMILY SSF56935 1 71 2.78E-14 T 09-03-2017 NA29_RS16240 6188793096840728c1f253e6ad9e5869 71 Gene3D G3DSA:2.40.170.20 1 71 8.4E-22 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS16240 6188793096840728c1f253e6ad9e5869 71 Pfam PF00593 TonB dependent receptor 4 71 6.8E-8 T 09-03-2017 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 NA29_RS01390 a894a3cc34b6a8c4f792e1e9c0ff87e4 191 Pfam PF04955 HupE / UreJ protein 5 186 1.3E-56 T 09-03-2017 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein NA29_RS01390 a894a3cc34b6a8c4f792e1e9c0ff87e4 191 PIRSF PIRSF016919 1 190 1.5E-54 T 09-03-2017 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein NA29_RS22940 6f12cca858d305c0779302c3ace7a1c9 449 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 350 440 3.4E-7 T 09-03-2017 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain NA29_RS22940 6f12cca858d305c0779302c3ace7a1c9 449 Pfam PF01943 Polysaccharide biosynthesis protein 20 297 2.7E-8 T 09-03-2017 IPR002797 Polysaccharide biosynthesis protein GO:0016020 NA29_RS10120 86defc6e5903473133c516db109aa154 291 Pfam PF16162 Domain of unknown function (DUF4868) 107 276 2.3E-7 T 09-03-2017 IPR032359 Protein of unknown function DUF4868 NA29_RS08285 85380d2220d646e2c02731f839f5a679 626 Pfam PF02517 CAAX protease self-immunity 534 617 3.2E-16 T 09-03-2017 IPR003675 CAAX amino terminal protease GO:0016020 NA29_RS01060 7a93e41be9a075cd5a13d714efc26066 298 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 10 289 3.9E-53 T 09-03-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 NA29_RS01060 7a93e41be9a075cd5a13d714efc26066 298 PIRSF PIRSF026649 2 298 6.6E-76 T 09-03-2017 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 NA29_RS25360 4cc2f5805e253d26ad53d35cc5aa99e0 264 Pfam PF03707 Bacterial signalling protein N terminal repeat 185 250 2.6E-6 T 09-03-2017 IPR005330 MHYT domain NA29_RS25360 4cc2f5805e253d26ad53d35cc5aa99e0 264 Pfam PF03707 Bacterial signalling protein N terminal repeat 58 106 1.8E-18 T 09-03-2017 IPR005330 MHYT domain NA29_RS25360 4cc2f5805e253d26ad53d35cc5aa99e0 264 Pfam PF03707 Bacterial signalling protein N terminal repeat 122 180 1.5E-16 T 09-03-2017 IPR005330 MHYT domain NA29_RS17300 0fd5c92a89ef6309bb362d3579b564cf 344 SUPERFAMILY SSF53850 37 276 2.28E-25 T 09-03-2017 NA29_RS17300 0fd5c92a89ef6309bb362d3579b564cf 344 Pfam PF13379 NMT1-like family 35 277 1.3E-22 T 09-03-2017 NA29_RS14885 f49f4cc64c7a71dd25659660efc2ba5f 392 Pfam PF11062 Protein of unknown function (DUF2863) 2 391 4.6E-178 T 09-03-2017 IPR021292 Protein of unknown function DUF2863 NA29_RS20805 392d961db7cde2103e8d981472568664 172 Pfam PF13924 Lipocalin-like domain 38 171 1.8E-29 T 09-03-2017 IPR024311 Lipocalin-like domain NA29_RS19860 217ac30cd9aa179fc58d21d9839b2af8 316 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 300 1.8E-47 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS20175 35f00224e790e4c8f4d36a185d2cfa15 394 Pfam PF07434 CblD like pilus biogenesis initiator 32 386 3.5E-43 T 09-03-2017 IPR010888 CblD-like pilus biogenesis initiator NA29_RS14300 e5d40583b813b326474fd0ad8da1e596 190 TIGRFAM TIGR01841 phasin: phasin family protein 31 118 8.2E-30 T 09-03-2017 IPR010127 Phasin, subfamily 1 NA29_RS14300 e5d40583b813b326474fd0ad8da1e596 190 Pfam PF09361 Phasin protein 11 109 5.7E-32 T 09-03-2017 IPR018968 Phasin NA29_RS12365 c5273db56604aecf09c1ff4006f0b3f8 204 SUPERFAMILY SSF56524 73 171 9.81E-8 T 09-03-2017 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 NA29_RS22970 eeddb36bed8376e69eff66e415407a33 396 Pfam PF01757 Acyltransferase family 27 363 2.2E-17 T 09-03-2017 IPR002656 Acyltransferase 3 GO:0016747 NA29_RS02250 13043fd5625398682fc7799dc157d88a 390 Pfam PF04892 VanZ like family 31 134 3.1E-10 T 09-03-2017 IPR006976 VanZ-like NA29_RS14150 7315c11d7074b59d23f8a2b3224ee844 339 Gene3D G3DSA:3.40.50.1820 35 310 7.4E-49 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS14150 7315c11d7074b59d23f8a2b3224ee844 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 130 143 4.6E-14 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS14150 7315c11d7074b59d23f8a2b3224ee844 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 258 272 4.6E-14 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS14150 7315c11d7074b59d23f8a2b3224ee844 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 144 157 4.6E-14 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS14150 7315c11d7074b59d23f8a2b3224ee844 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 100 4.6E-14 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS14150 7315c11d7074b59d23f8a2b3224ee844 339 SUPERFAMILY SSF53474 36 310 2.22E-48 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS14150 7315c11d7074b59d23f8a2b3224ee844 339 Pfam PF00561 alpha/beta hydrolase fold 59 296 1.1E-24 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 NA29_RS21110 b4f47ba7e31a553489452e195d305d39 134 Pfam PF07681 DoxX 11 92 3.7E-17 T 09-03-2017 IPR032808 DoxX family NA29_RS11195 e5803cb99ea7ab6f63319e915a36b2dd 146 Pfam PF11026 Protein of unknown function (DUF2721) 4 123 1.3E-23 T 09-03-2017 IPR021279 Protein of unknown function DUF2721 NA29_RS06820 e3bb45ebf43ec29a75c3eba68add1e31 595 Pfam PF00999 Sodium/hydrogen exchanger family 13 378 3.8E-63 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 NA29_RS23705 69d16bae23f740f2cf6caeea626b8fbc 711 Pfam PF05140 ResB-like family 27 697 3.9E-158 T 09-03-2017 IPR007816 ResB-like domain NA29_RS20115 cef44126f20bd986fa06ff764fcdbb45 164 Pfam PF06127 Protein of unknown function (DUF962) 1 144 1.4E-21 T 09-03-2017 IPR009305 Protein of unknown function DUF962 NA29_RS23370 012194244a331d5b79439faac108a50a 84 Pfam PF13986 Domain of unknown function (DUF4224) 13 56 1.1E-16 T 09-03-2017 IPR025319 Domain of unknown function DUF4224 NA29_RS06855 26b666c04ea08ae7d65e435f8e811997 46 Pfam PF12086 Protein of unknown function (DUF3563) 2 42 6.0E-8 T 09-03-2017 IPR021946 Protein of unknown function DUF3563 NA29_RS08345 b1acf75937b7b66fb8de028b5e31c853 63 TIGRFAM TIGR03510 XapX: XapX domain 10 57 2.7E-15 T 09-03-2017 IPR020017 XapX domain NA29_RS05745 d1f4ad760e95c8f2a4967e00da38682a 102 Pfam PF05957 Bacterial protein of unknown function (DUF883) 10 102 7.5E-31 T 09-03-2017 IPR010279 Protein of unknown function DUF883, ElaB NA29_RS04340 8a78c8966a897e3c0b56bb5c0d087f26 326 Pfam PF06189 5'-nucleotidase 42 322 1.2E-106 T 09-03-2017 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|Reactome: R-HSA-74259 NA29_RS11550 d574a496a2d7333a4db6dc7bf40161d3 71 Gene3D G3DSA:3.30.429.20 1 65 2.4E-25 T 09-03-2017 NA29_RS11550 d574a496a2d7333a4db6dc7bf40161d3 71 Pfam PF01361 Tautomerase enzyme 2 57 1.0E-17 T 09-03-2017 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 NA29_RS11550 d574a496a2d7333a4db6dc7bf40161d3 71 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 64 1.2E-20 T 09-03-2017 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 NA29_RS11550 d574a496a2d7333a4db6dc7bf40161d3 71 SUPERFAMILY SSF55331 2 66 4.65E-21 T 09-03-2017 IPR014347 Tautomerase/MIF superfamily NA29_RS21955 df60067184c93ca6e5113c14d42a899e 300 Pfam PF01863 Protein of unknown function DUF45 83 292 8.6E-58 T 09-03-2017 IPR002725 Protein of unknown function DUF45 NA29_RS09595 e01e06bceb6101828d1e769160e561bb 146 Pfam PF11681 Protein of unknown function (DUF3277) 1 144 9.1E-63 T 09-03-2017 IPR021695 Bacteriophage rv5, Orf52 NA29_RS17020 62d16693782c7a60c1d4600e9d9c860a 189 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 126 184 1.2E-22 T 09-03-2017 NA29_RS10910 46604ff2813c478e549cd719036b16d7 361 SUPERFAMILY SSF81345 23 355 2.09E-76 T 09-03-2017 IPR029022 ABC transporter, BtuC-like NA29_RS10910 46604ff2813c478e549cd719036b16d7 361 Pfam PF01032 FecCD transport family 40 355 1.0E-82 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 NA29_RS10910 46604ff2813c478e549cd719036b16d7 361 Gene3D G3DSA:1.10.3470.10 28 358 2.5E-97 T 09-03-2017 IPR029022 ABC transporter, BtuC-like NA29_RS05165 e51b76c2d914454ae9022c93fa43a2dd 233 SMART SM00965 61 112 1.8E-9 T 09-03-2017 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 NA29_RS05370 2bcc7707af8103444d1b1e07a65ac1c9 343 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 77 102 6.2E-4 T 09-03-2017 IPR006530 YD repeat NA29_RS24145 8bf4f6c773264648f245932c159f6011 329 Pfam PF03595 Voltage-dependent anion channel 20 318 3.5E-56 T 09-03-2017 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 NA29_RS07780 fc9cc80a8730379d3d16bbb0ea1de804 338 Pfam PF02653 Branched-chain amino acid transport system / permease component 28 296 3.2E-42 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS02080 5f6483e4ba928e7b8c6a3aff5a97563c 159 Pfam PF12778 PXPV repeat (3 copies) 41 56 0.003 T 09-03-2017 IPR024446 PXPV repeat NA29_RS25165 98707c5e4ea392597e4053ac45c65d5a 258 Pfam PF01925 Sulfite exporter TauE/SafE 12 249 2.6E-39 T 09-03-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 NA29_RS01525 d016f1c2fa2afd90dd64843963b86965 64 Pfam PF11146 Protein of unknown function (DUF2905) 3 64 2.6E-18 T 09-03-2017 IPR021320 Protein of unknown function DUF2905 NA29_RS04425 c4ff2b780df3862004a6731c76920954 214 Pfam PF04367 Protein of unknown function (DUF502) 63 168 2.2E-35 T 09-03-2017 IPR007462 Protein of unknown function DUF502 NA29_RS14725 6ea46b810fb777dceb8438581f887c69 549 Pfam PF00884 Sulfatase 221 508 6.6E-34 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 NA29_RS14725 6ea46b810fb777dceb8438581f887c69 549 SUPERFAMILY SSF53649 220 521 1.31E-19 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 NA29_RS14725 6ea46b810fb777dceb8438581f887c69 549 Gene3D G3DSA:3.40.720.10 223 512 2.9E-11 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 NA29_RS03840 8440545ea10576a0351f64ddbce6f0a8 368 SUPERFAMILY SSF51395 1 349 3.95E-108 T 09-03-2017 NA29_RS03840 8440545ea10576a0351f64ddbce6f0a8 368 Gene3D G3DSA:3.20.20.70 1 345 2.1E-113 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 NA29_RS03840 8440545ea10576a0351f64ddbce6f0a8 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 336 3.7E-61 T 09-03-2017 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 NA29_RS01770 3235994cbc20205cf3b7fdfa1603c6a2 243 Pfam PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA 71 242 2.9E-89 T 09-03-2017 IPR018655 Protein of unknown function DUF2086 NA29_RS02265 08180c87b5f7bbeecbe1f361016d1d26 212 Gene3D G3DSA:3.40.50.1820 7 211 4.5E-48 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS02265 08180c87b5f7bbeecbe1f361016d1d26 212 SUPERFAMILY SSF53474 3 211 8.87E-42 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold NA29_RS02265 08180c87b5f7bbeecbe1f361016d1d26 212 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 52 127 5.6E-12 T 09-03-2017 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 NA29_RS02980 6bdedcff8b6e0c31857da5483fe0eb6a 182 TIGRFAM TIGR03276 Phn-HD: phosphonate degradation operons associated HDIG domain protein 5 179 2.5E-72 T 09-03-2017 IPR017670 Phosphonate degradation operon associated HDIG domain protein NA29_RS02980 6bdedcff8b6e0c31857da5483fe0eb6a 182 SUPERFAMILY SSF109604 8 66 2.29E-6 T 09-03-2017 NA29_RS07805 f050a99cb46e8ce930286e2ccef4d071 566 Pfam PF02538 Hydantoinase B/oxoprolinase 3 530 8.9E-154 T 09-03-2017 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 NA29_RS12890 a595bfbde3a1913c12e4d59abcf78577 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 14 281 7.3E-33 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS21595 1c0aa66a31558abf29fe6d5a7fd9a1f3 307 Pfam PF11004 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 36 306 7.8E-123 T 09-03-2017 IPR021266 Kdo hydroxylase NA29_RS17205 b12ded16c8b058ea3a6ba364b7bd4a8a 255 Pfam PF01618 MotA/TolQ/ExbB proton channel family 119 223 2.7E-35 T 09-03-2017 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 NA29_RS12345 be04f6c820de6ed0f0c4778228c0cd6e 334 Pfam PF04116 Fatty acid hydroxylase superfamily 139 278 1.3E-30 T 09-03-2017 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 NA29_RS11700 08ce714553f2d506f6beb94b8f691e4e 191 Pfam PF14065 Protein of unknown function (DUF4255) 9 182 8.0E-28 T 09-03-2017 IPR025351 Protein of unknown function DUF4255 NA29_RS09590 83c1c4f8532d0020dcde38409fe7d893 491 Pfam PF11863 Protein of unknown function (DUF3383) 7 489 3.1E-194 T 09-03-2017 IPR021808 Protein of unknown function DUF3383 NA29_RS06900 f009382579602a0eb93a69ef2f2ea48f 588 Pfam PF00817 impB/mucB/samB family 47 164 6.5E-7 T 09-03-2017 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 NA29_RS06900 f009382579602a0eb93a69ef2f2ea48f 588 SUPERFAMILY SSF56672 47 169 3.56E-22 T 09-03-2017 NA29_RS06900 f009382579602a0eb93a69ef2f2ea48f 588 SUPERFAMILY SSF56672 230 302 3.56E-22 T 09-03-2017 NA29_RS14170 3b1cc9f34b8f5549ede88d60491c1740 114 Pfam PF13699 Domain of unknown function (DUF4157) 16 81 3.6E-9 T 09-03-2017 IPR025295 Domain of unknown function DUF4157 NA29_RS18015 b10d51abc0e25a49a82648928d9f492d 258 Pfam PF01925 Sulfite exporter TauE/SafE 8 256 6.1E-41 T 09-03-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 NA29_RS14345 10b59e19c7a71fd13c5a9616d7428450 211 Pfam PF13827 Domain of unknown function (DUF4189) 39 125 2.1E-7 T 09-03-2017 IPR025240 Domain of unknown function DUF4189 NA29_RS06605 ad273b6b435f8765d4fd525bc064faa8 324 Pfam PF02653 Branched-chain amino acid transport system / permease component 34 294 3.1E-35 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS08655 4684accade9c936271ac641492c75ee5 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 288 2.0E-31 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS09815 0aca6aa8166dbc5477e0faaa2d3fe107 61 Pfam PF04964 Flp/Fap pilin component 10 56 2.8E-13 T 09-03-2017 IPR007047 Flp/Fap pilin component NA29_RS07265 922de579b0aff8aace4319e3b8445acb 171 Pfam PF13664 Domain of unknown function (DUF4149) 22 127 1.8E-20 T 09-03-2017 IPR025423 Domain of unknown function DUF4149 NA29_RS04660 d943e518a1799f2edbcad3bd8e176781 107 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 11 94 2.2E-36 T 09-03-2017 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 NA29_RS16400 9a01ae7fb66f89d905d700c98f5c7f7f 252 Gene3D G3DSA:3.90.850.10 6 251 4.6E-44 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS16400 9a01ae7fb66f89d905d700c98f5c7f7f 252 SUPERFAMILY SSF56529 6 251 1.83E-39 T 09-03-2017 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 NA29_RS11690 ca0e29c5c412085a82005e2e07f391a7 873 Pfam PF14424 The BURPS668_1122 family of deaminases 673 830 2.8E-8 T 09-03-2017 IPR032721 Deaminases, BURPS668_1122 family NA29_RS08325 889ba9d5de7d707656ef671daffae1a0 213 SUPERFAMILY SSF48452 34 186 8.35E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS08325 889ba9d5de7d707656ef671daffae1a0 213 Gene3D G3DSA:1.25.40.10 37 183 3.1E-7 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 NA29_RS23290 17e748406b95917612a1b5c25360cb92 108 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 8 86 7.1E-15 T 09-03-2017 IPR019289 Bacteriophage tail protein Gp41, putative NA29_RS18500 7588df334957eb3769521798c3d12367 538 Pfam PF13520 Amino acid permease 12 429 3.1E-49 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NA29_RS18500 7588df334957eb3769521798c3d12367 538 PIRSF PIRSF006060 1 532 2.7E-79 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 NA29_RS18605 d361ebbd0561c8a31fd51ed8015cce15 247 Pfam PF06629 MltA-interacting protein MipA 20 247 2.7E-39 T 09-03-2017 IPR010583 MltA-interacting MipA NA29_RS02210 0c4ae4073480619d098a19370dd9af4d 335 Pfam PF06089 L-asparaginase II 7 326 9.8E-113 T 09-03-2017 IPR010349 L-asparaginase II NA29_RS17940 4bdeaa42be42f250a22794d5eb9b7130 127 Pfam PF10667 Protein of unknown function (DUF2486) 41 122 6.2E-13 T 09-03-2017 IPR018924 Protein of unknown function DUF2486 NA29_RS07040 51a8d9928d43866886d1e87e08d21ce9 174 Pfam PF11066 Protein of unknown function (DUF2867) 19 157 1.1E-30 T 09-03-2017 IPR021295 Protein of unknown function DUF2867 NA29_RS06465 479ac93c633bf55821c8ff1246181b70 156 Pfam PF16155 Domain of unknown function (DUF4863) 9 152 2.0E-61 T 09-03-2017 IPR032345 Protein of unknown function DUF4863 NA29_RS11645 73804b19bfdb1793d4974035a8a2a063 206 Pfam PF13529 Peptidase_C39 like family 9 176 2.1E-8 T 09-03-2017 NA29_RS02525 901ac257f3e9af275f2927b3079a6c29 159 PIRSF PIRSF032162 3 159 1.4E-37 T 09-03-2017 IPR016990 Uncharacterised conserved protein UCP032162, transmembrane NA29_RS02525 901ac257f3e9af275f2927b3079a6c29 159 Pfam PF10003 Integral membrane protein (DUF2244) 21 155 8.8E-46 T 09-03-2017 IPR019253 Protein of unknown function DUF2244, transmembrane NA29_RS05380 6cfabf8c1f12b18b945645fd5cb3c0d6 229 SUPERFAMILY SSF53448 2 209 7.03E-29 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS05380 6cfabf8c1f12b18b945645fd5cb3c0d6 229 Gene3D G3DSA:3.90.550.10 2 203 3.0E-18 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases NA29_RS05380 6cfabf8c1f12b18b945645fd5cb3c0d6 229 Pfam PF00535 Glycosyl transferase family 2 4 146 6.1E-11 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 NA29_RS09070 121566748f333c6451eb87025a9820c7 142 Pfam PF12279 Protein of unknown function (DUF3619) 9 139 1.1E-41 T 09-03-2017 IPR022064 Protein of unknown function DUF3619 NA29_RS18660 ef13adb6065124a109792198b5ce9e89 261 Gene3D G3DSA:1.20.910.10 5 254 9.7E-13 T 09-03-2017 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 NA29_RS18660 ef13adb6065124a109792198b5ce9e89 261 Pfam PF11251 Protein of unknown function (DUF3050) 18 246 6.5E-86 T 09-03-2017 IPR024423 Protein of unknown function DUF3050 NA29_RS18660 ef13adb6065124a109792198b5ce9e89 261 SUPERFAMILY SSF48613 133 252 5.56E-6 T 09-03-2017 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 NA29_RS23270 63e73cb1da8985515e039e2256d21a78 69 Pfam PF10122 Mu-like prophage protein Com 7 54 3.1E-15 T 09-03-2017 IPR019294 Translational regulator Com NA29_RS23005 187bc267592c092df64dcd085139a5af 474 Pfam PF03783 Curli production assembly/transport component CsgG 191 251 1.1E-5 T 09-03-2017 IPR005534 Curli production assembly/transport component CsgG GO:0030288 NA29_RS00805 61974afc609f5171eb5cf8ef3eae0e85 246 ProDom PD038222 INVASION PLASMID OXYGEN-REGULATED III SECRETION MXIN TYPE SYSTEM PATHWAY ORGB 1 171 3.0E-5 T 09-03-2017 NA29_RS10680 7df5699aa5eea7c3e004fc5443417de1 394 Pfam PF01594 Domain of unknown function DUF20 14 345 2.0E-31 T 09-03-2017 IPR002549 Transmembrane protein TqsA-like NA29_RS03350 6d838702a12798e83fb2e9c888132c22 197 SUPERFAMILY SSF53335 31 175 3.63E-5 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase NA29_RS18665 0010675b33ce6d8f1364d66d55b1e8a4 307 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 11 265 1.3E-19 T 09-03-2017 IPR025859 P-aminobenzoate N-oxygenase AurF NA29_RS16365 47af439a795047ef7aa6b23892584d5e 259 Pfam PF01925 Sulfite exporter TauE/SafE 19 249 5.6E-23 T 09-03-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 NA29_RS19710 f83ea2f638cccbaa6e876dc2f4094eb6 132 Pfam PF12779 YXWGXW repeat (2 copies) 48 72 5.1E-8 T 09-03-2017 IPR024447 YXWGXW repeat NA29_RS15420 f774412a09b790ee391b408804f9a3cc 121 Gene3D G3DSA:1.10.760.10 32 111 2.6E-21 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS15420 f774412a09b790ee391b408804f9a3cc 121 SUPERFAMILY SSF46626 1 111 1.27E-16 T 09-03-2017 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 NA29_RS17050 eabb81971357a80248b1b5d69f852a89 211 Pfam PF03458 UPF0126 domain 9 81 1.5E-17 T 09-03-2017 IPR005115 Uncharacterised domain UPF0126 NA29_RS17050 eabb81971357a80248b1b5d69f852a89 211 Pfam PF03458 UPF0126 domain 95 166 1.5E-19 T 09-03-2017 IPR005115 Uncharacterised domain UPF0126 NA29_RS02375 c09e41b609ff9c5b8512805d8a53c9dc 82 Pfam PF04380 Membrane fusogenic activity 1 74 1.3E-29 T 09-03-2017 IPR007475 Membrane fusogenic activity NA29_RS06910 a6df3516bef95e1f3616431373a30a93 92 SUPERFAMILY SSF143011 31 92 6.28E-13 T 09-03-2017 NA29_RS06910 a6df3516bef95e1f3616431373a30a93 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 26 92 6.8E-17 T 09-03-2017 IPR007711 Toxin HigB-1 NA29_RS02725 edd44edbcdad5c1a93dc0313a3213fe3 110 Pfam PF07769 psiF repeat 75 105 1.4E-15 T 09-03-2017 IPR011690 Phosphate-starvation-induced PsiF repeat NA29_RS02725 edd44edbcdad5c1a93dc0313a3213fe3 110 Pfam PF07769 psiF repeat 35 65 2.7E-15 T 09-03-2017 IPR011690 Phosphate-starvation-induced PsiF repeat NA29_RS14265 5609c9e69d37408be5e3237a19ddf6ee 241 Pfam PF02754 Cysteine-rich domain 132 216 3.1E-11 T 09-03-2017 IPR004017 Cysteine-rich domain NA29_RS14265 5609c9e69d37408be5e3237a19ddf6ee 241 Pfam PF02754 Cysteine-rich domain 3 83 1.2E-16 T 09-03-2017 IPR004017 Cysteine-rich domain NA29_RS11375 38e487516ca035eacce8d85160e8c5cd 77 Pfam PF13663 Domain of unknown function (DUF4148) 1 67 4.6E-6 T 09-03-2017 IPR025421 Protein of unknown function DUF4148 NA29_RS25020 17e7efb74639efa0f2edcea0939d3dea 171 SMART SM00260 21 158 1.6E-39 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS25020 17e7efb74639efa0f2edcea0939d3dea 171 Gene3D G3DSA:2.40.50.180 63 99 2.8E-10 T 09-03-2017 NA29_RS25020 17e7efb74639efa0f2edcea0939d3dea 171 Pfam PF01584 CheW-like domain 25 160 2.8E-37 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS25020 17e7efb74639efa0f2edcea0939d3dea 171 Gene3D G3DSA:2.30.30.40 100 151 1.1E-5 T 09-03-2017 NA29_RS25020 17e7efb74639efa0f2edcea0939d3dea 171 SUPERFAMILY SSF50341 19 162 2.88E-40 T 09-03-2017 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 NA29_RS24545 05219afed4c1b1841f086c2008f3b84a 302 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 261 1.2E-31 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS00680 5be48df06f61f2b7e67979ecaa4fc647 65 Pfam PF04328 Protein of unknown function (DUF466) 5 65 1.6E-30 T 09-03-2017 IPR007423 Protein of unknown function DUF466 NA29_RS03105 5f819b3062bb2df00faefda97257ab4c 132 Pfam PF07681 DoxX 14 92 1.1E-12 T 09-03-2017 IPR032808 DoxX family NA29_RS15780 669296344fc9e5bf23528beea5b89248 1328 Pfam PF05359 Domain of Unknown Function (DUF748) 436 572 3.9E-17 T 09-03-2017 IPR008023 Protein of unknown function DUF748 NA29_RS15780 669296344fc9e5bf23528beea5b89248 1328 Pfam PF05359 Domain of Unknown Function (DUF748) 670 823 2.7E-34 T 09-03-2017 IPR008023 Protein of unknown function DUF748 NA29_RS15780 669296344fc9e5bf23528beea5b89248 1328 Pfam PF05359 Domain of Unknown Function (DUF748) 935 1081 8.9E-37 T 09-03-2017 IPR008023 Protein of unknown function DUF748 NA29_RS15780 669296344fc9e5bf23528beea5b89248 1328 Pfam PF05359 Domain of Unknown Function (DUF748) 178 330 6.5E-22 T 09-03-2017 IPR008023 Protein of unknown function DUF748 NA29_RS15780 669296344fc9e5bf23528beea5b89248 1328 Gene3D G3DSA:3.30.1330.60 1274 1304 2.9E-6 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS15780 669296344fc9e5bf23528beea5b89248 1328 Gene3D G3DSA:3.30.1330.60 1149 1191 2.9E-6 T 09-03-2017 IPR006665 OmpA-like domain NA29_RS21205 4a245932691639fa5678fa6d7361970a 73 Pfam PF11755 Protein of unknown function (DUF3311) 8 65 3.3E-11 T 09-03-2017 IPR021741 Protein of unknown function DUF3311 NA29_RS05045 10926b6e1547f4f633aa70daa61db99f 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 276 1.1E-43 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS17160 d84351b46a479ca6a19ca8d60ea9c5e3 498 Pfam PF00474 Sodium:solute symporter family 46 434 1.5E-24 T 09-03-2017 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 NA29_RS10645 aa2647435908a8febac420122225310d 280 Pfam PF01925 Sulfite exporter TauE/SafE 13 273 5.7E-40 T 09-03-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 NA29_RS18585 5b6e9b3bca81d9cdafd8ece8c93ec15d 235 Pfam PF01925 Sulfite exporter TauE/SafE 3 229 4.9E-29 T 09-03-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 NA29_RS06590 3573f113c776bd4b92dbf37f2f746116 119 SUPERFAMILY SSF47413 58 105 2.22E-8 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS06590 3573f113c776bd4b92dbf37f2f746116 119 Gene3D G3DSA:1.10.260.40 60 110 6.6E-14 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 NA29_RS17630 82e6741e66967ab747dea5f1eea27233 60 Pfam PF11943 Protein of unknown function (DUF3460) 1 59 1.2E-28 T 09-03-2017 IPR021853 Protein of unknown function DUF3460 NA29_RS14365 22a477a23ac6a1aa1f20446c4eff190a 63 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 6 60 7.0E-22 T 09-03-2017 IPR019201 Protein of unknown function DUF2065 NA29_RS15480 417b68e9d1cd580455862c68d62d0ac1 298 SUPERFAMILY SSF103481 191 281 2.09E-10 T 09-03-2017 NA29_RS15480 417b68e9d1cd580455862c68d62d0ac1 298 Pfam PF00892 EamA-like transporter family 153 282 1.3E-12 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS15480 417b68e9d1cd580455862c68d62d0ac1 298 Pfam PF00892 EamA-like transporter family 7 131 3.3E-15 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 NA29_RS15480 417b68e9d1cd580455862c68d62d0ac1 298 SUPERFAMILY SSF103481 42 138 5.36E-12 T 09-03-2017 NA29_RS12220 27c5f7aec439817a1e39200535f7a5a1 263 Pfam PF06966 Protein of unknown function (DUF1295) 22 249 1.0E-60 T 09-03-2017 IPR010721 Protein of unknown function DUF1295 NA29_RS20970 bc8f8c455d82f443bb67fe649787a122 197 Pfam PF02620 Uncharacterized ACR, COG1399 72 189 3.8E-24 T 09-03-2017 IPR003772 Protein of unknown function DUF177 NA29_RS05160 8ec9d23a5347610dcaeb62f6168b34ed 165 Pfam PF10722 Putative bacterial sensory transduction regulator 4 125 1.2E-9 T 09-03-2017 IPR019660 Putative sensory transduction regulator YbjN NA29_RS21345 aac72139b30dfaf1b45c6c33e051af66 136 Pfam PF13663 Domain of unknown function (DUF4148) 1 67 1.7E-18 T 09-03-2017 IPR025421 Protein of unknown function DUF4148 NA29_RS21345 aac72139b30dfaf1b45c6c33e051af66 136 Pfam PF13663 Domain of unknown function (DUF4148) 104 131 3.4E-6 T 09-03-2017 IPR025421 Protein of unknown function DUF4148 NA29_RS21345 aac72139b30dfaf1b45c6c33e051af66 136 Pfam PF13663 Domain of unknown function (DUF4148) 72 102 1.8E-9 T 09-03-2017 IPR025421 Protein of unknown function DUF4148 NA29_RS17620 f77a557150c08ce8c6d8519af5bcf33f 1344 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 998 1343 3.6E-62 T 09-03-2017 IPR007452 Translocation and assembly module TamB NA29_RS23295 d1699cbcb8877a49fd9b5e95db2a29cd 25 Pfam PF06528 Phage P2 GpE 1 23 1.9E-9 T 09-03-2017 IPR009493 Burkholderia phage phiE202, Gp27 NA29_RS05530 4410b6f866c6bb7b707f7ccc4e64e75c 213 Pfam PF11161 Protein of unknown function (DUF2946) 1 209 2.1E-68 T 09-03-2017 IPR021332 Protein of unknown function DUF2944 NA29_RS16500 017bdbebe0c3f744141d90ad5a27e947 77 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 5 66 1.7E-26 T 09-03-2017 IPR021074 Formate dehydrogenase, delta subunit NA29_RS12765 7e83121fe3510eb7584595398331a8e8 350 Pfam PF00487 Fatty acid desaturase 73 314 4.6E-26 T 09-03-2017 IPR005804 Fatty acid desaturase domain GO:0006629 NA29_RS05875 740294d6d3fa76b97ef082a012fe63fc 702 Pfam PF05170 AsmA family 197 544 1.0E-57 T 09-03-2017 IPR007844 AsmA NA29_RS17215 f42080ac6c49b6eed24ce381d835ad14 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 135 1.0E-23 T 09-03-2017 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 NA29_RS02400 ae499ee7f45483a449acdcfb29ccca89 349 Gene3D G3DSA:1.10.10.10 284 328 5.3E-4 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain NA29_RS06755 e1900ae2c61faf43cabe1511714e1992 202 Pfam PF13590 Domain of unknown function (DUF4136) 28 187 4.5E-19 T 09-03-2017 IPR025411 Domain of unknown function DUF4136 NA29_RS05720 77e49a755456292efed7655abc54d8fd 320 Pfam PF16074 Type IV Pilus-assembly protein W 166 300 5.1E-12 T 09-03-2017 IPR032092 Type IV Pilus-assembly protein W GO:0043683 NA29_RS23315 f00f4d363ec78c54e17e3201c9058444 376 Pfam PF12686 Protein of unknown function (DUF3800) 94 354 5.0E-11 T 09-03-2017 IPR024524 Protein of unknown function DUF3800 NA29_RS00050 27f4145bcac7666187f5424597c70b49 459 TIGRFAM TIGR00784 citMHS: citrate transporter 2 457 1.1E-86 T 09-03-2017 IPR014738 Citrate transporter GO:0015137|GO:0015746 NA29_RS00050 27f4145bcac7666187f5424597c70b49 459 Pfam PF03600 Citrate transporter 17 402 4.7E-41 T 09-03-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 NA29_RS15980 e72c0338d83d2877dfa3c2ac8719d80f 371 Pfam PF04143 Sulphur transport 30 357 2.3E-59 T 09-03-2017 IPR007272 Sulphur transport domain NA29_RS19855 62f61742c045ebc88e9d104f6da874ec 367 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 349 2.7E-50 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS07380 f9027eba796ac71795394076c503e906 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 93 1.6E-15 T 09-03-2017 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family NA29_RS18280 2c352b5a5ab0df55e9ec36b94a82887e 92 Pfam PF13663 Domain of unknown function (DUF4148) 3 65 2.3E-6 T 09-03-2017 IPR025421 Protein of unknown function DUF4148 NA29_RS05020 416e9bf745da756e420aabca9dc25dd0 67 Pfam PF13127 Protein of unknown function (DUF3955) 1 49 3.5E-17 T 09-03-2017 IPR025016 Protein of unknown function DUF3955 NA29_RS09065 1461eb46483eafe4cb6034abad181dcf 283 Pfam PF11304 Protein of unknown function (DUF3106) 81 180 1.4E-32 T 09-03-2017 IPR021455 Protein of unknown function DUF3106 NA29_RS18400 6f770761e3948c6e5ab5fe3958753683 172 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 26 145 3.9E-15 T 09-03-2017 IPR007621 TPM domain NA29_RS21705 eade9276023011203c744f1da28c757a 226 Pfam PF11136 Protein of unknown function (DUF2889) 13 136 6.7E-46 T 09-03-2017 IPR021312 Protein of unknown function DUF2889 NA29_RS00735 413fd7fb75d35b8a1088b019eb6f5232 286 Pfam PF14334 Domain of unknown function (DUF4390) 31 193 1.1E-58 T 09-03-2017 IPR025500 Protein of unknown function DUF4390 NA29_RS19240 ed6b733e67b0a6d260c5e4760ec06c81 87 Pfam PF13663 Domain of unknown function (DUF4148) 1 56 1.9E-12 T 09-03-2017 IPR025421 Protein of unknown function DUF4148 NA29_RS25390 672e7b02d96e3938f85f271bac06681b 256 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 252 5.3E-47 T 09-03-2017 IPR018648 Protein of unknown function DUF2076 NA29_RS23180 1b3625969fb617fcb69ee8448689132e 336 Pfam PF05125 Phage major capsid protein, P2 family 9 331 1.4E-143 T 09-03-2017 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 NA29_RS23180 1b3625969fb617fcb69ee8448689132e 336 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 8 332 2.5E-106 T 09-03-2017 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 NA29_RS04400 05d9aa97ec3cd969ecf6ca8cae3bc1e1 207 Pfam PF02036 SCP-2 sterol transfer family 12 103 1.4E-7 T 09-03-2017 IPR003033 SCP2 sterol-binding domain NA29_RS09510 23dc810bbdf1e0c98365088a450cf247 249 Pfam PF06912 Protein of unknown function (DUF1275) 23 237 7.2E-37 T 09-03-2017 IPR010699 Protein of unknown function DUF1275 NA29_RS03915 e0ece4c59a69cb8b6d73ee156c0b39b7 133 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 16 130 7.4E-21 T 09-03-2017 IPR009387 Toxin HigB-2 NA29_RS06420 b0728ee83ea6acbfa3d70d84f76b85da 176 Pfam PF02417 Chromate transporter 7 169 2.3E-35 T 09-03-2017 IPR003370 Chromate transporter GO:0015109|GO:0015703 NA29_RS07510 8ea7a90ab5ecbf130cf5820636b816b4 316 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 300 1.8E-47 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS08660 0ca2d6dad2693f2434f814b44ca14d89 358 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 333 8.4E-36 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS01030 1dffbe45d5eeb8f990d1345898f74934 363 Pfam PF00482 Type II secretion system (T2SS), protein F 231 349 3.4E-5 T 09-03-2017 IPR018076 Type II secretion system F domain NA29_RS05790 659981a3c22b536ce1fe9038f5a69ddc 349 SUPERFAMILY SSF144052 21 279 1.57E-11 T 09-03-2017 NA29_RS18885 71c40b443c8896abaafde06d77b63fa3 189 SUPERFAMILY SSF103039 13 130 1.44E-5 T 09-03-2017 IPR028976 CheC-like domain NA29_RS22740 be31d4b88a83d823dae224b41e699915 289 Pfam PF04228 Putative neutral zinc metallopeptidase 1 283 1.1E-114 T 09-03-2017 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative NA29_RS06130 855f7f0d484eb27fabbbc71261155710 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 28 291 7.7E-33 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS05610 82eb4ffcc1fe04e8110ccf16fc873a8f 288 Pfam PF04116 Fatty acid hydroxylase superfamily 82 216 1.1E-30 T 09-03-2017 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 NA29_RS00620 fccf4daa59360f166f2eafbf8200513f 189 Pfam PF13801 Heavy-metal resistance 12 143 2.8E-7 T 09-03-2017 IPR025961 Heavy-metal resistance protein NA29_RS21525 c1b7ea8898b069f7be2265fdce702aa1 271 Pfam PF11828 Protein of unknown function (DUF3348) 1 249 4.3E-87 T 09-03-2017 IPR021783 Protein of unknown function DUF3348 NA29_RS08990 886dde32b20613462b09dfd17c71071e 198 Pfam PF13548 Domain of unknown function (DUF4126) 5 176 2.1E-56 T 09-03-2017 IPR025196 Domain of unknown function DUF4126 NA29_RS00110 68160a5748710a37b4f1194bfaa5f35b 157 Pfam PF04120 Low affinity iron permease 6 122 1.0E-51 T 09-03-2017 IPR007251 Low affinity iron permease, Fet4 GO:0055085 NA29_RS08280 df790f2ffc431450e29c30a70c1b9cb7 223 Pfam PF07077 Protein of unknown function (DUF1345) 41 213 3.3E-56 T 09-03-2017 IPR009781 Protein of unknown function DUF1345 NA29_RS21750 3956fdfab13d93c6e1f38a7554ae618d 127 Pfam PF13453 Transcription factor zinc-finger 2 43 1.5E-21 T 09-03-2017 IPR027392 Transcription factor zinc-finger NA29_RS01320 113d08c887e55289186c580eba144f34 118 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 105 4.1E-33 T 09-03-2017 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV NA29_RS09710 24fbeb30fceb6e06148ad94c4366609b 245 Pfam PF03591 AzlC protein 19 160 1.5E-39 T 09-03-2017 IPR011606 Branched-chain amino acid transport, permease NA29_RS23175 07d0dae5d02f3191b2443d1bf857d327 295 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 5 295 6.2E-86 T 09-03-2017 IPR009228 Capsid scaffolding protein GpO GO:0019069 NA29_RS04155 09fe1126b0bdf7818e6a1957faf43c25 251 Pfam PF10099 Anti-sigma-K factor rskA 62 235 3.9E-20 T 09-03-2017 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 NA29_RS20680 2165341d76cbcbfbda15ae36850810b7 330 SUPERFAMILY SSF48613 118 324 2.73E-8 T 09-03-2017 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 NA29_RS25175 3e3fa6c2e6d7d7c3fd9cbad5c227518f 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 16 282 2.3E-38 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 NA29_RS19680 75208d48ed36889a7775ea8b8f61126e 149 Pfam PF04143 Sulphur transport 50 136 3.6E-7 T 09-03-2017 IPR007272 Sulphur transport domain