locus-tag	class	description
AL522_RS00020	PF07690	Major Facilitator Superfamily
AL522_RS00135	PF03894	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
AL522_RS00135	PF09364	XFP N-terminal domain
AL522_RS00135	PF09363	XFP C-terminal domain
AL522_RS00140	PF09364	XFP N-terminal domain
AL522_RS00140	PF09363	XFP C-terminal domain
AL522_RS00140	PF03894	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
AL522_RS00195	PF03631	Virulence factor BrkB
AL522_RS00670	PF03466	LysR substrate binding domain
AL522_RS00670	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS00760	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL522_RS00760	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL522_RS00795	PF01546	Peptidase family M20/M25/M40
AL522_RS00795	PF07687	Peptidase dimerisation domain
AL522_RS00810	PF00311	Phosphoenolpyruvate carboxylase
AL522_RS00820	PF00311	Phosphoenolpyruvate carboxylase
AL522_RS01190	PF00860	Permease family
AL522_RS01200	PF05170	AsmA family
AL522_RS01395	PF01134	Glucose inhibited division protein A
AL522_RS01395	PF13932	GidA associated domain
AL522_RS01420	PF00306	ATP synthase alpha/beta chain, C terminal domain
AL522_RS01420	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL522_RS01420	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL522_RS01460	PF07690	Major Facilitator Superfamily
AL522_RS01640	PF00986	DNA gyrase B subunit, carboxyl terminus
AL522_RS01640	PF01751	Toprim domain
AL522_RS01640	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS01640	PF18053	DNA gyrase B subunit insert domain
AL522_RS01640	PF00204	DNA gyrase B
AL522_RS01710	PF01648	4'-phosphopantetheinyl transferase superfamily
AL522_RS01715	PF00860	Permease family
AL522_RS01775	PF00384	Molybdopterin oxidoreductase
AL522_RS01775	PF01568	Molydopterin dinucleotide binding domain
AL522_RS01775	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL522_RS01895	PF03552	Cellulose synthase
AL522_RS01895	PF00535	Glycosyl transferase family 2
AL522_RS01895	PF07238	PilZ domain
AL522_RS01910	PF03170	Bacterial cellulose synthase subunit
AL522_RS01940	PF10995	Cellulose biosynthesis GIL
AL522_RS01965	PF03170	Bacterial cellulose synthase subunit
AL522_RS02000	PF00563	EAL domain
AL522_RS02000	PF17154	Gammaproteobacterial periplasmic sensor domain
AL522_RS02000	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS02000	PF00672	HAMP domain
AL522_RS02060	PF02541	Ppx/GppA phosphatase family
AL522_RS02455	PF04561	RNA polymerase Rpb2, domain 2
AL522_RS02455	PF04560	RNA polymerase Rpb2, domain 7
AL522_RS02455	PF04563	RNA polymerase beta subunit
AL522_RS02455	PF00562	RNA polymerase Rpb2, domain 6
AL522_RS02455	PF10385	RNA polymerase beta subunit external 1 domain
AL522_RS02455	PF04565	RNA polymerase Rpb2, domain 3
AL522_RS02460	PF04563	RNA polymerase beta subunit
AL522_RS02460	PF04561	RNA polymerase Rpb2, domain 2
AL522_RS02460	PF00562	RNA polymerase Rpb2, domain 6
AL522_RS02460	PF10385	RNA polymerase beta subunit external 1 domain
AL522_RS02460	PF04565	RNA polymerase Rpb2, domain 3
AL522_RS02460	PF04560	RNA polymerase Rpb2, domain 7
AL522_RS02485	PF04997	RNA polymerase Rpb1, domain 1
AL522_RS02485	PF04998	RNA polymerase Rpb1, domain 5
AL522_RS02485	PF04983	RNA polymerase Rpb1, domain 3
AL522_RS02485	PF00623	RNA polymerase Rpb1, domain 2
AL522_RS02485	PF05000	RNA polymerase Rpb1, domain 4
AL522_RS02640	PF06082	Exopolysaccharide biosynthesis protein YbjH
AL522_RS02750	PF06039	Malate:quinone oxidoreductase (Mqo)
AL522_RS02760	PF09363	XFP C-terminal domain
AL522_RS02760	PF09364	XFP N-terminal domain
AL522_RS02760	PF03894	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
AL522_RS02835	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL522_RS02835	PF00205	Thiamine pyrophosphate enzyme, central domain
AL522_RS02835	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL522_RS02860	PF03466	LysR substrate binding domain
AL522_RS02860	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS02910	PF03466	LysR substrate binding domain
AL522_RS02910	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS02930	PF00764	Arginosuccinate synthase
AL522_RS02945	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL522_RS02945	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL522_RS03005	PF00270	DEAD/DEAH box helicase
AL522_RS03005	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
AL522_RS03005	PF17764	3′ DNA-binding domain (3′BD)
AL522_RS03005	PF18074	Primosomal protein N C-terminal domain
AL522_RS03005	PF00271	Helicase conserved C-terminal domain
AL522_RS03030	PF00227	Proteasome subunit
AL522_RS03150	PF01370	NAD dependent epimerase/dehydratase family
AL522_RS03210	PF02441	Flavoprotein
AL522_RS03210	PF04127	DNA / pantothenate metabolism flavoprotein
AL522_RS03265	PF03458	UPF0126 domain
AL522_RS03510	PF00119	ATP synthase A chain
AL522_RS03525	PF11871	Domain of unknown function (DUF3391)
AL522_RS03525	PF01966	HD domain
AL522_RS03530	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL522_RS03530	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL522_RS03535	PF07690	Major Facilitator Superfamily
AL522_RS03545	PF00005	ABC transporter
AL522_RS03545	PF00664	ABC transporter transmembrane region
AL522_RS03555	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS03555	PF03466	LysR substrate binding domain
AL522_RS03565	PF12146	Serine aminopeptidase, S33
AL522_RS03575	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
AL522_RS03580	PF01156	Inosine-uridine preferring nucleoside hydrolase
AL522_RS03585	PF07690	Major Facilitator Superfamily
AL522_RS03595	PF00561	alpha/beta hydrolase fold
AL522_RS03610	PF02659	Putative manganese efflux pump
AL522_RS03615	PF06643	Protein of unknown function (DUF1158)
AL522_RS03620	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS03620	PF00155	Aminotransferase class I and II
AL522_RS03625	PF02627	Carboxymuconolactone decarboxylase family
AL522_RS03630	PF06039	Malate:quinone oxidoreductase (Mqo)
AL522_RS03635	PF09364	XFP N-terminal domain
AL522_RS03635	PF09363	XFP C-terminal domain
AL522_RS03635	PF03894	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
AL522_RS03645	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS03645	PF00155	Aminotransferase class I and II
AL522_RS03650	PF00043	Glutathione S-transferase, C-terminal domain
AL522_RS03650	PF13417	Glutathione S-transferase, N-terminal domain
AL522_RS03655	PF02567	Phenazine biosynthesis-like protein
AL522_RS03665	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS03665	PF03466	LysR substrate binding domain
AL522_RS03670	PF03631	Virulence factor BrkB
AL522_RS03675	PF00083	Sugar (and other) transporter
AL522_RS03675	PF07690	Major Facilitator Superfamily
AL522_RS03680	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
AL522_RS03680	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
AL522_RS03685	PF03466	LysR substrate binding domain
AL522_RS03685	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS03690	PF00585	C-terminal regulatory domain of Threonine dehydratase
AL522_RS03690	PF00291	Pyridoxal-phosphate dependent enzyme
AL522_RS03695	PF00920	Dehydratase family
AL522_RS03700	PF01063	Amino-transferase class IV
AL522_RS03710	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL522_RS03710	PF00205	Thiamine pyrophosphate enzyme, central domain
AL522_RS03710	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL522_RS03715	PF13335	Magnesium chelatase, subunit ChlI C-terminal
AL522_RS03715	PF01078	Magnesium chelatase, subunit ChlI
AL522_RS03720	PF04219	Protein of unknown function, DUF
AL522_RS03725	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS03725	PF03466	LysR substrate binding domain
AL522_RS03765	PF01177	Asp/Glu/Hydantoin racemase
AL522_RS03770	PF07715	TonB-dependent Receptor Plug Domain
AL522_RS03770	PF00593	TonB dependent receptor
AL522_RS03775	PF05958	tRNA (Uracil-5-)-methyltransferase
AL522_RS03780	PF07226	Protein of unknown function (DUF1422)
AL522_RS03785	PF00440	Bacterial regulatory proteins, tetR family
AL522_RS03790	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL522_RS03790	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL522_RS03795	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS03795	PF03466	LysR substrate binding domain
AL522_RS03800	PF00462	Glutaredoxin
AL522_RS03800	PF08534	Redoxin
AL522_RS03805	PF00206	Lyase
AL522_RS03805	PF14698	Argininosuccinate lyase C-terminal
AL522_RS03810	PF00764	Arginosuccinate synthase
AL522_RS03815	PF00696	Amino acid kinase family
AL522_RS03820	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL522_RS03820	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL522_RS03825	PF07687	Peptidase dimerisation domain
AL522_RS03825	PF01546	Peptidase family M20/M25/M40
AL522_RS03830	PF00311	Phosphoenolpyruvate carboxylase
AL522_RS03835	PF02219	Methylenetetrahydrofolate reductase
AL522_RS03840	PF03447	Homoserine dehydrogenase, NAD binding domain
AL522_RS03840	PF00696	Amino acid kinase family
AL522_RS03840	PF00742	Homoserine dehydrogenase
AL522_RS03845	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL522_RS03850	PF01340	Met Apo-repressor, MetJ
AL522_RS03855	PF01197	Ribosomal protein L31
AL522_RS03860	PF00271	Helicase conserved C-terminal domain
AL522_RS03860	PF00270	DEAD/DEAH box helicase
AL522_RS03860	PF17764	3′ DNA-binding domain (3′BD)
AL522_RS03860	PF18074	Primosomal protein N C-terminal domain
AL522_RS03860	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
AL522_RS03865	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS03870	PF05036	Sporulation related domain
AL522_RS03875	PF00227	Proteasome subunit
AL522_RS03880	PF00004	ATPase family associated with various cellular activities (AAA)
AL522_RS03880	PF07724	AAA domain (Cdc48 subfamily)
AL522_RS03880	PF10431	C-terminal, D2-small domain, of ClpB protein 
AL522_RS03885	PF03737	Aldolase/RraA
AL522_RS03890	PF06005	Cell division protein ZapB 
AL522_RS03895	PF00230	Major intrinsic protein
AL522_RS03900	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AL522_RS03900	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AL522_RS03905	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
AL522_RS03910	PF07690	Major Facilitator Superfamily
AL522_RS03915	PF00175	Oxidoreductase NAD-binding domain 
AL522_RS03915	PF00970	Oxidoreductase FAD-binding domain
AL522_RS03920	PF05656	Protein of unknown function (DUF805)
AL522_RS03925	PF07305	Protein of unknown function (DUF1454)
AL522_RS03930	PF00121	Triosephosphate isomerase
AL522_RS03935	PF02611	CDP-diacylglycerol pyrophosphatase
AL522_RS03945	PF00365	Phosphofructokinase
AL522_RS03950	PF16916	Dimerisation domain of Zinc Transporter
AL522_RS03950	PF01545	Cation efflux family
AL522_RS03955	PF10685	Stress-induced bacterial acidophilic repeat motif
AL522_RS03960	PF07813	LTXXQ motif family protein
AL522_RS03965	PF00072	Response regulator receiver domain
AL522_RS03965	PF00486	Transcriptional regulatory protein, C terminal
AL522_RS03970	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS03970	PF16527	Two-component sensor protein CpxA, periplasmic domain
AL522_RS03970	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS03970	PF00672	HAMP domain
AL522_RS03975	PF00588	SpoU rRNA Methylase family
AL522_RS03980	PF00132	Bacterial transferase hexapeptide (six repeats)
AL522_RS03980	PF06426	Serine acetyltransferase, N-terminal 
AL522_RS03985	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
AL522_RS03985	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
AL522_RS03995	PF00462	Glutaredoxin
AL522_RS04000	PF00581	Rhodanese-like domain
AL522_RS04005	PF01551	Peptidase family M23
AL522_RS04010	PF04748	Divergent polysaccharide deacetylase
AL522_RS04015	PF00534	Glycosyl transferases group 1
AL522_RS04025	PF00107	Zinc-binding dehydrogenase
AL522_RS04025	PF08240	Alcohol dehydrogenase GroES-like domain
AL522_RS04030	PF00155	Aminotransferase class I and II
AL522_RS04035	PF01370	NAD dependent epimerase/dehydratase family
AL522_RS04040	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL522_RS04045	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL522_RS04055	PF08437	Glycosyl transferase family 8 C-terminal
AL522_RS04055	PF01501	Glycosyl transferase family 8
AL522_RS04060	PF00535	Glycosyl transferase family 2
AL522_RS04065	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL522_RS04070	PF13439	Glycosyltransferase Family 4
AL522_RS04070	PF00534	Glycosyl transferases group 1
AL522_RS04075	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
AL522_RS04080	PF00535	Glycosyl transferase family 2
AL522_RS04085	PF01467	Cytidylyltransferase-like
AL522_RS04090	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
AL522_RS04090	PF06827	Zinc finger found in FPG and IleRS
AL522_RS04090	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
AL522_RS04095	PF00471	Ribosomal protein L33
AL522_RS04100	PF00830	Ribosomal L28 family
AL522_RS04105	PF04002	RadC-like JAB domain
AL522_RS04110	PF04127	DNA / pantothenate metabolism flavoprotein
AL522_RS04110	PF02441	Flavoprotein
AL522_RS04115	PF00692	dUTPase
AL522_RS04120	PF00440	Bacterial regulatory proteins, tetR family
AL522_RS04125	PF00156	Phosphoribosyl transferase domain
AL522_RS04130	PF03725	3' exoribonuclease family, domain 2
AL522_RS04130	PF01138	3' exoribonuclease family, domain 1
AL522_RS04135	PF07662	Na+ dependent nucleoside transporter C-terminus
AL522_RS04135	PF07670	Nucleoside recognition
AL522_RS04135	PF01773	Na+ dependent nucleoside transporter N-terminus
AL522_RS04145	PF03755	YicC-like family, N-terminal region 
AL522_RS04145	PF08340	Domain of unknown function (DUF1732)
AL522_RS04160	PF03279	Bacterial lipid A biosynthesis acyltransferase
AL522_RS04165	PF01168	Alanine racemase, N-terminal domain
AL522_RS04165	PF14031	Putative serine dehydratase domain
AL522_RS04185	PF03458	UPF0126 domain
AL522_RS04190	PF03120	NAD-dependent DNA ligase OB-fold domain
AL522_RS04190	PF01653	NAD-dependent DNA ligase adenylation domain
AL522_RS04195	PF00625	Guanylate kinase
AL522_RS04200	PF01192	RNA polymerase Rpb6 
AL522_RS04205	PF02824	TGS domain
AL522_RS04205	PF13291	ACT domain
AL522_RS04205	PF04607	Region found in RelA / SpoT proteins
AL522_RS04210	PF12105	SpoU, rRNA methylase, C-terminal
AL522_RS04210	PF00588	SpoU rRNA Methylase family
AL522_RS04215	PF00270	DEAD/DEAH box helicase
AL522_RS04215	PF17191	RecG wedge domain
AL522_RS04215	PF00271	Helicase conserved C-terminal domain
AL522_RS04220	PF00860	Permease family
AL522_RS04225	PF05170	AsmA family
AL522_RS04230	PF09500	Putative thioesterase (yiiD_Cterm)
AL522_RS04230	PF00583	Acetyltransferase (GNAT) family
AL522_RS04235	PF02580	D-Tyr-tRNA(Tyr) deacylase
AL522_RS04240	PF03631	Virulence factor BrkB
AL522_RS04245	PF13419	Haloacid dehalogenase-like hydrolase
AL522_RS04250	PF00679	Elongation factor G C-terminus
AL522_RS04250	PF00009	Elongation factor Tu GTP binding domain
AL522_RS04250	PF03144	Elongation factor Tu domain 2
AL522_RS04255	PF00120	Glutamine synthetase, catalytic domain
AL522_RS04255	PF03951	Glutamine synthetase, beta-Grasp domain
AL522_RS04260	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS04260	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS04260	PF00989	PAS fold
AL522_RS04265	PF02954	Bacterial regulatory protein, Fis family
AL522_RS04265	PF00072	Response regulator receiver domain
AL522_RS04265	PF00158	Sigma-54 interaction domain
AL522_RS04270	PF06969	HemN C-terminal domain
AL522_RS04270	PF04055	Radical SAM superfamily
AL522_RS04275	PF04220	Der GTPase activator (YihI)
AL522_RS04280	PF01926	50S ribosome-binding GTPase
AL522_RS04285	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AL522_RS04285	PF00476	DNA polymerase family A
AL522_RS04285	PF01367	5'-3' exonuclease, C-terminal SAM fold
AL522_RS04285	PF01612	3'-5' exonuclease
AL522_RS04290	PF01323	DSBA-like thioredoxin domain
AL522_RS04295	PF01636	Phosphotransferase enzyme family
AL522_RS04300	PF06288	Protein of unknown function (DUF1040)
AL522_RS04305	PF12804	MobA-like NTP transferase domain
AL522_RS04310	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
AL522_RS04335	PF07690	Major Facilitator Superfamily
AL522_RS04340	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS04345	PF00294	pfkB family carbohydrate kinase
AL522_RS04350	PF13407	Periplasmic binding protein domain
AL522_RS04360	PF00005	ABC transporter
AL522_RS04365	PF05025	RbsD / FucU transport protein family
AL522_RS04370	PF04076	Bacterial OB fold (BOF) protein
AL522_RS04375	PF00072	Response regulator receiver domain
AL522_RS04375	PF00486	Transcriptional regulatory protein, C terminal
AL522_RS04380	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS04380	PF08521	Two-component sensor kinase N-terminal
AL522_RS04380	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS04385	PF02705	K+ potassium transporter
AL522_RS04390	PF07728	AAA domain (dynein-related subfamily)
AL522_RS04390	PF12592	Protein of unknown function (DUF3763)
AL522_RS04390	PF17868	AAA lid domain
AL522_RS04395	PF05762	VWA domain containing CoxE-like protein
AL522_RS04400	PF12867	DinB superfamily
AL522_RS04400	PF03781	Sulfatase-modifying factor enzyme 1
AL522_RS04405	PF01037	Lrp/AsnC ligand binding domain
AL522_RS04410	PF00258	Flavodoxin
AL522_RS04415	PF13932	GidA associated domain
AL522_RS04415	PF01134	Glucose inhibited division protein A
AL522_RS04420	PF02527	rRNA small subunit methyltransferase G
AL522_RS04425	PF03899	ATP synthase I chain
AL522_RS04430	PF00119	ATP synthase A chain
AL522_RS04435	PF00137	ATP synthase subunit C
AL522_RS04440	PF00430	ATP synthase B/B' CF(0)
AL522_RS04445	PF00213	ATP synthase delta (OSCP) subunit
AL522_RS04450	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL522_RS04450	PF00306	ATP synthase alpha/beta chain, C terminal domain
AL522_RS04450	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL522_RS04455	PF00231	ATP synthase
AL522_RS04460	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL522_RS04460	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AL522_RS04465	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
AL522_RS04465	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
AL522_RS04470	PF00132	Bacterial transferase hexapeptide (six repeats)
AL522_RS04470	PF12804	MobA-like NTP transferase domain
AL522_RS04475	PF01380	SIS domain
AL522_RS04480	PF12849	PBP superfamily domain
AL522_RS04485	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS04490	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS04495	PF00005	ABC transporter
AL522_RS04500	PF01895	PhoU domain
AL522_RS04505	PF07690	Major Facilitator Superfamily
AL522_RS04510	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AL522_RS04510	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AL522_RS04525	PF13407	Periplasmic binding protein domain
AL522_RS04530	PF00005	ABC transporter
AL522_RS04535	PF02653	Branched-chain amino acid transport system / permease component
AL522_RS04540	PF12833	Helix-turn-helix domain
AL522_RS04545	PF00083	Sugar (and other) transporter
AL522_RS04550	PF00480	ROK family
AL522_RS04555	PF01695	IstB-like ATP binding protein
AL522_RS04560	PF17948	DnaT DNA-binding domain
AL522_RS04570	PF03797	Autotransporter beta-domain
AL522_RS04575	PF03352	Methyladenine glycosylase
AL522_RS04580	PF00691	OmpA family
AL522_RS04580	PF13488	Glycine zipper
AL522_RS04585	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS04585	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL522_RS04590	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS04600	PF00294	pfkB family carbohydrate kinase
AL522_RS04605	PF07690	Major Facilitator Superfamily
AL522_RS04610	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL522_RS04610	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL522_RS04615	PF00155	Aminotransferase class I and II
AL522_RS04620	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS04620	PF00155	Aminotransferase class I and II
AL522_RS04630	PF01820	D-ala D-ala ligase N-terminus
AL522_RS04630	PF07478	D-ala D-ala ligase C-terminus
AL522_RS04645	PF04073	Aminoacyl-tRNA editing domain
AL522_RS04650	PF00892	EamA-like transporter family
AL522_RS04655	PF00011	Hsp20/alpha crystallin family
AL522_RS04660	PF07119	Protein of unknown function (DUF1375)
AL522_RS04665	PF07676	WD40-like Beta Propeller Repeat
AL522_RS04665	PF12566	Protein of unknown function (DUF3748)
AL522_RS04675	PF04074	YhcH/YjgK/YiaL
AL522_RS04680	PF00986	DNA gyrase B subunit, carboxyl terminus
AL522_RS04680	PF00204	DNA gyrase B
AL522_RS04680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS04680	PF01751	Toprim domain
AL522_RS04680	PF18053	DNA gyrase B subunit insert domain
AL522_RS04685	PF02463	RecF/RecN/SMC N terminal domain
AL522_RS04690	PF02767	DNA polymerase III beta subunit, central domain
AL522_RS04690	PF00712	DNA polymerase III beta subunit, N-terminal domain
AL522_RS04690	PF02768	DNA polymerase III beta subunit, C-terminal domain
AL522_RS04695	PF08299	Bacterial dnaA protein helix-turn-helix
AL522_RS04695	PF11638	DnaA N-terminal domain
AL522_RS04695	PF00308	Bacterial dnaA  protein
AL522_RS04700	PF00825	Ribonuclease P
AL522_RS04705	PF02096	60Kd inner membrane protein
AL522_RS04705	PF14849	YidC periplasmic domain
AL522_RS04710	PF01926	50S ribosome-binding GTPase
AL522_RS04710	PF10396	GTP-binding protein TrmE N-terminus
AL522_RS04710	PF12631	MnmE helical domain
AL522_RS04715	PF00881	Nitroreductase family
AL522_RS04720	PF01648	4'-phosphopantetheinyl transferase superfamily
AL522_RS04725	PF00860	Permease family
AL522_RS04730	PF13419	Haloacid dehalogenase-like hydrolase
AL522_RS04735	PF01965	DJ-1/PfpI family
AL522_RS04740	PF01757	Acyltransferase family
AL522_RS04745	PF02091	Glycyl-tRNA synthetase alpha subunit
AL522_RS04750	PF05746	DALR anticodon binding domain
AL522_RS04750	PF02092	Glycyl-tRNA synthetase beta subunit
AL522_RS04765	PF13417	Glutathione S-transferase, N-terminal domain
AL522_RS04765	PF00043	Glutathione S-transferase, C-terminal domain
AL522_RS04770	PF04216	Protein involved in formate dehydrogenase formation
AL522_RS04775	PF01292	Prokaryotic cytochrome b561
AL522_RS04780	PF13247	4Fe-4S dicluster domain
AL522_RS04780	PF09163	Formate dehydrogenase N, transmembrane
AL522_RS04785	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL522_RS04785	PF01568	Molydopterin dinucleotide binding domain
AL522_RS04785	PF00384	Molybdopterin oxidoreductase
AL522_RS04790	PF02634	FdhD/NarQ family
AL522_RS04795	PF00455	DeoR C terminal sensor domain
AL522_RS04795	PF08220	DeoR-like helix-turn-helix domain
AL522_RS04800	PF00202	Aminotransferase class-III
AL522_RS04805	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AL522_RS04805	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AL522_RS04810	PF04393	Protein of unknown function (DUF535)
AL522_RS04815	PF10928	Protein of unknown function (DUF2810)
AL522_RS04820	PF05068	Mannitol repressor
AL522_RS04825	PF01232	Mannitol dehydrogenase Rossmann domain
AL522_RS04825	PF08125	Mannitol dehydrogenase C-terminal domain
AL522_RS04830	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL522_RS04830	PF02378	Phosphotransferase system, EIIC 
AL522_RS04830	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL522_RS04835	PF11254	Protein of unknown function (DUF3053)
AL522_RS04845	PF01381	Helix-turn-helix
AL522_RS04855	PF01047	MarR family
AL522_RS04860	PF02566	OsmC-like protein
AL522_RS04865	PF08019	Phosphoethanolamine transferase EptA/EptB
AL522_RS04865	PF00884	Sulfatase
AL522_RS04875	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL522_RS04880	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS04885	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS04885	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL522_RS04890	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL522_RS04890	PF00005	ABC transporter
AL522_RS04895	PF00005	ABC transporter
AL522_RS04895	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL522_RS04910	PF10609	NUBPL iron-transfer P-loop NTPase
AL522_RS04915	PF03552	Cellulose synthase
AL522_RS04915	PF07238	PilZ domain
AL522_RS04915	PF00535	Glycosyl transferase family 2
AL522_RS04920	PF03170	Bacterial cellulose synthase subunit
AL522_RS04925	PF05420	Cellulose synthase operon protein C C-terminus (BCSC_C)
AL522_RS04935	PF01270	Glycosyl hydrolases family 8
AL522_RS04940	PF11658	Cellulose biosynthesis protein BcsG
AL522_RS04950	PF10995	Cellulose biosynthesis GIL
AL522_RS04955	PF10945	Cellulose biosynthesis protein BcsR
AL522_RS04960	PF06564	Cellulose biosynthesis protein BcsQ
AL522_RS04965	PF00535	Glycosyl transferase family 2
AL522_RS04965	PF07238	PilZ domain
AL522_RS04970	PF03170	Bacterial cellulose synthase subunit
AL522_RS04975	PF05420	Cellulose synthase operon protein C C-terminus (BCSC_C)
AL522_RS04980	PF00563	EAL domain
AL522_RS04980	PF17154	Gammaproteobacterial periplasmic sensor domain
AL522_RS04980	PF00672	HAMP domain
AL522_RS04980	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS04985	PF00375	Sodium:dicarboxylate symporter family
AL522_RS04990	PF00675	Insulinase (Peptidase family M16)
AL522_RS04990	PF05193	Peptidase M16 inactive domain
AL522_RS04995	PF07859	alpha/beta hydrolase fold
AL522_RS04995	PF00331	Glycosyl hydrolase family 10
AL522_RS05000	PF00294	pfkB family carbohydrate kinase
AL522_RS05005	PF00563	EAL domain
AL522_RS05010	PF05170	AsmA family
AL522_RS05020	PF00580	UvrD/REP helicase N-terminal domain
AL522_RS05020	PF13361	UvrD-like helicase C-terminal domain
AL522_RS05025	PF02541	Ppx/GppA phosphatase family
AL522_RS05030	PF00270	DEAD/DEAH box helicase
AL522_RS05030	PF00271	Helicase conserved C-terminal domain
AL522_RS05035	PF00085	Thioredoxin
AL522_RS05040	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL522_RS05040	PF07498	Rho termination factor, N-terminal domain
AL522_RS05040	PF07497	Rho termination factor, RNA-binding domain
AL522_RS05045	PF00953	Glycosyl transferase family 4
AL522_RS05050	PF02706	Chain length determinant protein
AL522_RS05055	PF02350	UDP-N-acetylglucosamine 2-epimerase
AL522_RS05060	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AL522_RS05060	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AL522_RS05060	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AL522_RS05065	PF16363	GDP-mannose 4,6 dehydratase
AL522_RS05070	PF00483	Nucleotidyl transferase
AL522_RS05080	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
AL522_RS05085	PF01943	Polysaccharide biosynthesis protein
AL522_RS05090	PF07429	4-alpha-L-fucosyltransferase glycosyl transferase group 56
AL522_RS05095	PF06899	WzyE protein, O-antigen assembly polymerase
AL522_RS05100	PF03808	Glycosyl transferase WecB/TagA/CpsF family
AL522_RS05125	PF07719	Tetratricopeptide repeat
AL522_RS05125	PF07219	HemY protein N-terminus
AL522_RS05130	PF04375	HemX, putative uroporphyrinogen-III C-methyltransferase
AL522_RS05135	PF02602	Uroporphyrinogen-III synthase HemD
AL522_RS05140	PF03900	Porphobilinogen deaminase, C-terminal domain
AL522_RS05140	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
AL522_RS05145	PF12633	Adenylate cyclase NT domain
AL522_RS05145	PF01295	Adenylate cyclase, class-I
AL522_RS05150	PF13627	Prokaryotic lipoprotein-attachment site
AL522_RS05155	PF01678	Diaminopimelate epimerase
AL522_RS05160	PF04340	Protein of unknown function, DUF484
AL522_RS05165	PF02899	Phage integrase, N-terminal SAM-like domain
AL522_RS05165	PF00589	Phage integrase family
AL522_RS05170	PF13419	Haloacid dehalogenase-like hydrolase
AL522_RS05175	PF00580	UvrD/REP helicase N-terminal domain
AL522_RS05175	PF13361	UvrD-like helicase C-terminal domain
AL522_RS05180	PF01544	CorA-like Mg2+ transporter protein
AL522_RS05185	PF05145	Transition state regulatory protein AbrB
AL522_RS05190	PF00892	EamA-like transporter family
AL522_RS05195	PF03061	Thioesterase superfamily
AL522_RS05200	PF02253	Phospholipase A1
AL522_RS05205	PF09382	RQC domain
AL522_RS05205	PF16124	RecQ zinc-binding
AL522_RS05205	PF00570	HRDC domain
AL522_RS05205	PF00271	Helicase conserved C-terminal domain
AL522_RS05205	PF00270	DEAD/DEAH box helicase
AL522_RS05210	PF01810	LysE type translocator
AL522_RS05220	PF01810	LysE type translocator
AL522_RS05225	PF12146	Serine aminopeptidase, S33
AL522_RS05235	PF07690	Major Facilitator Superfamily
AL522_RS05240	PF00892	EamA-like transporter family
AL522_RS05245	PF07308	Protein of unknown function (DUF1456)
AL522_RS05250	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS05250	PF03466	LysR substrate binding domain
AL522_RS05255	PF01717	Cobalamin-independent synthase, Catalytic domain
AL522_RS05255	PF08267	Cobalamin-independent synthase, N-terminal domain
AL522_RS05260	PF01738	Dienelactone hydrolase family
AL522_RS05265	PF01048	Phosphorylase superfamily
AL522_RS05275	PF02646	RmuC family
AL522_RS05280	PF01209	ubiE/COQ5 methyltransferase family
AL522_RS05285	PF02036	SCP-2 sterol transfer family
AL522_RS05290	PF03109	ABC1 family
AL522_RS05295	PF02416	mttA/Hcf106 family
AL522_RS05305	PF00902	Sec-independent protein translocase protein (TatC)
AL522_RS05310	PF01026	TatD related DNase
AL522_RS05315	PF02357	Transcription termination factor nusG
AL522_RS05320	PF03575	Peptidase family S51
AL522_RS05325	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
AL522_RS05330	PF00175	Oxidoreductase NAD-binding domain 
AL522_RS05330	PF00970	Oxidoreductase FAD-binding domain
AL522_RS05335	PF00108	Thiolase, N-terminal domain
AL522_RS05335	PF02803	Thiolase, C-terminal domain
AL522_RS05340	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL522_RS05340	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL522_RS05340	PF00378	Enoyl-CoA hydratase/isomerase
AL522_RS05345	PF00557	Metallopeptidase family M24
AL522_RS05350	PF09186	Domain of unknown function (DUF1949)
AL522_RS05350	PF01205	Uncharacterized protein family UPF0029
AL522_RS05355	PF02386	Cation transport protein
AL522_RS05360	PF12724	Flavodoxin domain
AL522_RS05385	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
AL522_RS05385	PF01565	FAD binding domain 
AL522_RS05390	PF02237	Biotin protein ligase C terminal domain
AL522_RS05390	PF03099	Biotin/lipoate A/B protein ligase family
AL522_RS05390	PF08279	HTH domain
AL522_RS05395	PF00485	Phosphoribulokinase / Uridine kinase family
AL522_RS05425	PF00009	Elongation factor Tu GTP binding domain
AL522_RS05425	PF03144	Elongation factor Tu domain 2
AL522_RS05425	PF03143	Elongation factor Tu C-terminal domain
AL522_RS05430	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
AL522_RS05435	PF02357	Transcription termination factor nusG
AL522_RS05435	PF00467	KOW motif
AL522_RS05440	PF00298	Ribosomal protein L11, RNA binding domain
AL522_RS05440	PF03946	Ribosomal protein L11, N-terminal domain
AL522_RS05445	PF00687	Ribosomal protein L1p/L10e family
AL522_RS05450	PF00466	Ribosomal protein L10
AL522_RS05455	PF16320	Ribosomal protein L7/L12 dimerisation domain
AL522_RS05455	PF00542	Ribosomal protein L7/L12 C-terminal domain
AL522_RS05460	PF10385	RNA polymerase beta subunit external 1 domain
AL522_RS05460	PF04563	RNA polymerase beta subunit
AL522_RS05460	PF04561	RNA polymerase Rpb2, domain 2
AL522_RS05460	PF04565	RNA polymerase Rpb2, domain 3
AL522_RS05460	PF04560	RNA polymerase Rpb2, domain 7
AL522_RS05460	PF00562	RNA polymerase Rpb2, domain 6
AL522_RS05465	PF00623	RNA polymerase Rpb1, domain 2
AL522_RS05465	PF04997	RNA polymerase Rpb1, domain 1
AL522_RS05465	PF05000	RNA polymerase Rpb1, domain 4
AL522_RS05465	PF04983	RNA polymerase Rpb1, domain 3
AL522_RS05465	PF04998	RNA polymerase Rpb1, domain 5
AL522_RS05475	PF00155	Aminotransferase class I and II
AL522_RS05475	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS05480	PF02581	Thiamine monophosphate synthase
AL522_RS05485	PF01964	Radical SAM ThiC family
AL522_RS05485	PF13667	ThiC-associated domain 
AL522_RS05490	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
AL522_RS05495	PF00293	NUDIX domain
AL522_RS05495	PF09297	NADH pyrophosphatase zinc ribbon domain
AL522_RS05500	PF01208	Uroporphyrinogen decarboxylase (URO-D)
AL522_RS05505	PF04493	Endonuclease V
AL522_RS05510	PF04222	Protein of unknown function (DUF416)
AL522_RS05515	PF00216	Bacterial DNA-binding protein
AL522_RS05525	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
AL522_RS05525	PF02843	Phosphoribosylglycinamide synthetase, C domain
AL522_RS05525	PF02844	Phosphoribosylglycinamide synthetase, N domain
AL522_RS05530	PF02142	MGS-like domain
AL522_RS05530	PF01808	AICARFT/IMPCHase bienzyme
AL522_RS05560	PF04204	Homoserine O-succinyltransferase 
AL522_RS05565	PF01274	Malate synthase
AL522_RS05570	PF00463	Isocitrate lyase family
AL522_RS05575	PF06315	Isocitrate dehydrogenase kinase/phosphatase (AceK)
AL522_RS05580	PF09339	IclR helix-turn-helix domain
AL522_RS05580	PF01614	Bacterial transcriptional regulator
AL522_RS05585	PF02965	Vitamin B12 dependent methionine synthase, activation domain
AL522_RS05585	PF00809	Pterin binding enzyme
AL522_RS05585	PF02574	Homocysteine S-methyltransferase
AL522_RS05585	PF02607	B12 binding domain
AL522_RS05585	PF02310	B12 binding domain
AL522_RS05590	PF06082	Exopolysaccharide biosynthesis protein YbjH
AL522_RS05595	PF06251	Capsule biosynthesis GfcC
AL522_RS05600	PF11102	Group 4 capsule polysaccharide lipoprotein gfcB, YjbF
AL522_RS05615	PF00342	Phosphoglucose isomerase
AL522_RS05620	PF01842	ACT domain
AL522_RS05620	PF00696	Amino acid kinase family
AL522_RS05625	PF00230	Major intrinsic protein
AL522_RS05630	PF01758	Sodium Bile acid symporter family
AL522_RS05635	PF02690	Na+/Pi-cotransporter
AL522_RS05640	PF08402	TOBE domain
AL522_RS05640	PF00005	ABC transporter
AL522_RS05650	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS05665	PF07729	FCD domain
AL522_RS05665	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS05670	PF06146	Phosphate-starvation-inducible E
AL522_RS05675	PF04345	Chorismate lyase
AL522_RS05685	PF01553	Acyltransferase
AL522_RS05690	PF01219	Prokaryotic diacylglycerol kinase
AL522_RS05695	PF01726	LexA DNA binding domain
AL522_RS05695	PF00717	Peptidase S24-like
AL522_RS05700	PF01554	MatE
AL522_RS05705	PF05532	CsbD-like
AL522_RS05710	PF01475	Ferric uptake regulator family
AL522_RS05720	PF01207	Dihydrouridine synthase (Dus)
AL522_RS05725	PF09583	Phage shock protein G (Phageshock_PspG)
AL522_RS05730	PF08240	Alcohol dehydrogenase GroES-like domain
AL522_RS05730	PF00107	Zinc-binding dehydrogenase
AL522_RS05735	PF03796	DnaB-like helicase C terminal domain
AL522_RS05735	PF00772	DnaB-like helicase N terminal domain
AL522_RS05740	PF01037	Lrp/AsnC ligand binding domain
AL522_RS05750	PF00155	Aminotransferase class I and II
AL522_RS05755	PF01894	Uncharacterised protein family UPF0047
AL522_RS05760	PF04237	YjbR
AL522_RS05765	PF00107	Zinc-binding dehydrogenase
AL522_RS05765	PF08240	Alcohol dehydrogenase GroES-like domain
AL522_RS05770	PF17755	UvrA DNA-binding domain
AL522_RS05770	PF00005	ABC transporter
AL522_RS05770	PF17760	UvrA interaction domain
AL522_RS05775	PF00436	Single-strand binding protein family
AL522_RS05790	PF00892	EamA-like transporter family
AL522_RS05810	PF15940	Family of unknown function
AL522_RS05815	PF12833	Helix-turn-helix domain
AL522_RS05820	PF09278	MerR, DNA binding
AL522_RS05820	PF00376	MerR family regulatory protein
AL522_RS05830	PF00860	Permease family
AL522_RS05835	PF00999	Sodium/hydrogen exchanger family
AL522_RS05840	PF03466	LysR substrate binding domain
AL522_RS05840	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS05845	PF03788	LrgA family
AL522_RS05850	PF04172	LrgB-like family 
AL522_RS05860	PF00474	Sodium:solute symporter family
AL522_RS05865	PF04341	Protein of unknown function, DUF485
AL522_RS05870	PF16177	Acetyl-coenzyme A synthetase N-terminus
AL522_RS05870	PF00501	AMP-binding enzyme
AL522_RS05870	PF13193	AMP-binding enzyme C-terminal domain
AL522_RS05875	PF00375	Sodium:dicarboxylate symporter family
AL522_RS05880	PF13580	SIS domain
AL522_RS05885	PF02378	Phosphotransferase system, EIIC 
AL522_RS05885	PF00367	phosphotransferase system, EIIB
AL522_RS05890	PF08447	PAS fold
AL522_RS05890	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL522_RS05900	PF07690	Major Facilitator Superfamily
AL522_RS05930	PF05992	SbmA/BacA-like family
AL522_RS05935	PF13618	Gluconate 2-dehydrogenase subunit 3
AL522_RS05940	PF05199	GMC oxidoreductase
AL522_RS05940	PF00732	GMC oxidoreductase
AL522_RS05945	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
AL522_RS05945	PF00034	Cytochrome c
AL522_RS05950	PF00083	Sugar (and other) transporter
AL522_RS05955	PF03806	AbgT putative transporter family
AL522_RS05960	PF01546	Peptidase family M20/M25/M40
AL522_RS05965	PF07687	Peptidase dimerisation domain
AL522_RS05965	PF01546	Peptidase family M20/M25/M40
AL522_RS05970	PF03466	LysR substrate binding domain
AL522_RS05970	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS05980	PF03502	Nucleoside-specific channel-forming protein, Tsx
AL522_RS05985	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS05985	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS05985	PF08521	Two-component sensor kinase N-terminal
AL522_RS05990	PF00072	Response regulator receiver domain
AL522_RS05990	PF00486	Transcriptional regulatory protein, C terminal
AL522_RS05995	PF12833	Helix-turn-helix domain
AL522_RS06000	PF03466	LysR substrate binding domain
AL522_RS06000	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS06005	PF07690	Major Facilitator Superfamily
AL522_RS06010	PF01011	PQQ enzyme repeat
AL522_RS06030	PF01869	BadF/BadG/BcrA/BcrD ATPase family
AL522_RS06035	PF01325	Iron dependent repressor, N-terminal DNA binding domain
AL522_RS06035	PF00480	ROK family
AL522_RS06040	PF17912	MalK OB fold domain
AL522_RS06040	PF00005	ABC transporter
AL522_RS06055	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS06060	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS06070	PF00180	Isocitrate/isopropylmalate dehydrogenase
AL522_RS06075	PF03466	LysR substrate binding domain
AL522_RS06075	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS06090	PF02798	Glutathione S-transferase, N-terminal domain
AL522_RS06095	PF01261	Xylose isomerase-like TIM barrel
AL522_RS06120	PF09222	Fimbrial adhesin F17-AG, lectin domain
AL522_RS06120	PF00419	Fimbrial protein
AL522_RS06125	PF00419	Fimbrial protein
AL522_RS06130	PF00577	Outer membrane usher protein
AL522_RS06130	PF13953	PapC C-terminal domain
AL522_RS06130	PF13954	PapC N-terminal domain
AL522_RS06135	PF02753	Pili assembly chaperone PapD, C-terminal domain
AL522_RS06135	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AL522_RS06140	PF00419	Fimbrial protein
AL522_RS06155	PF02683	Cytochrome C biogenesis protein transmembrane region
AL522_RS06155	PF13098	Thioredoxin-like domain
AL522_RS06155	PF11412	Disulphide bond corrector protein DsbC
AL522_RS06160	PF03091	CutA1 divalent ion tolerance protein
AL522_RS06165	PF03605	Anaerobic c4-dicarboxylate membrane transporter
AL522_RS06170	PF10415	Fumarase C C-terminus
AL522_RS06170	PF00206	Lyase
AL522_RS06175	PF04186	FxsA cytoplasmic membrane protein 
AL522_RS06180	PF00166	Chaperonin 10 Kd subunit
AL522_RS06185	PF00118	TCP-1/cpn60 chaperonin family
AL522_RS06190	PF13698	Domain of unknown function (DUF4156)
AL522_RS06195	PF04055	Radical SAM superfamily
AL522_RS06200	PF01132	Elongation factor P (EF-P) OB domain
AL522_RS06200	PF08207	Elongation factor P (EF-P) KOW-like domain
AL522_RS06200	PF09285	Elongation factor P, C-terminal
AL522_RS06205	PF08085	Entericidin EcnA/B family
AL522_RS06210	PF08212	Lipocalin-like domain
AL522_RS06215	PF00152	tRNA synthetases class II (D, K and N) 
AL522_RS06220	PF13180	PDZ domain
AL522_RS06225	PF13180	PDZ domain
AL522_RS06225	PF00595	PDZ domain
AL522_RS06230	PF06295	Protein of unknown function (DUF1043)
AL522_RS06235	PF03969	AFG1-like ATPase
AL522_RS06240	PF00572	Ribosomal protein L13
AL522_RS06245	PF00380	Ribosomal protein S9/S16
AL522_RS06250	PF02798	Glutathione S-transferase, N-terminal domain
AL522_RS06250	PF00043	Glutathione S-transferase, C-terminal domain
AL522_RS06255	PF04386	Stringent starvation protein B
AL522_RS06260	PF00667	FAD binding domain
AL522_RS06260	PF00258	Flavodoxin
AL522_RS06260	PF00175	Oxidoreductase NAD-binding domain 
AL522_RS06265	PF00310	Glutamine amidotransferases class-II
AL522_RS06265	PF04898	Glutamate synthase central domain
AL522_RS06265	PF01645	Conserved region in glutamate synthase
AL522_RS06265	PF01493	GXGXG motif
AL522_RS06270	PF18415	Histidine kinase receptor ArcB trans-membrane domain
AL522_RS06270	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS06270	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS06270	PF01627	Hpt domain
AL522_RS06270	PF00989	PAS fold
AL522_RS06270	PF00072	Response regulator receiver domain
AL522_RS06275	PF00912	Transglycosylase
AL522_RS06280	PF00381	PTS HPr component phosphorylation site
AL522_RS06285	PF03668	P-loop ATPase protein family
AL522_RS06290	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL522_RS06295	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AL522_RS06300	PF04552	Sigma-54, DNA binding domain
AL522_RS06300	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
AL522_RS06300	PF04963	Sigma-54 factor, core binding domain
AL522_RS06305	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL522_RS06305	PF00005	ABC transporter
AL522_RS06310	PF03968	OstA-like protein
AL522_RS06315	PF06835	Lipopolysaccharide-assembly, LptC-related
AL522_RS06325	PF00571	CBS domain
AL522_RS06325	PF01380	SIS domain
AL522_RS06330	PF01699	Sodium/calcium exchanger protein
AL522_RS06335	PF00005	ABC transporter
AL522_RS06340	PF02405	Permease MlaE
AL522_RS06345	PF02470	MlaD protein
AL522_RS06350	PF05494	MlaC protein
AL522_RS06355	PF13466	STAS domain
AL522_RS06360	PF01722	BolA-like protein
AL522_RS06365	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AL522_RS06370	PF13693	Winged helix-turn-helix DNA-binding
AL522_RS06375	PF00348	Polyprenyl synthetase
AL522_RS06380	PF00829	Ribosomal prokaryotic L21 protein
AL522_RS06385	PF01016	Ribosomal L27 protein
AL522_RS06390	PF01926	50S ribosome-binding GTPase
AL522_RS06390	PF01018	GTP1/OBG
AL522_RS06395	PF03061	Thioesterase superfamily
AL522_RS06405	PF00857	Isochorismatase family
AL522_RS06405	PF00550	Phosphopantetheine attachment site
AL522_RS06410	PF13193	AMP-binding enzyme C-terminal domain
AL522_RS06410	PF00501	AMP-binding enzyme
AL522_RS06415	PF00425	chorismate binding enzyme
AL522_RS06420	PF01497	Periplasmic binding protein
AL522_RS06425	PF05977	Transmembrane secretion effector
AL522_RS06430	PF01032	FecCD transport family
AL522_RS06435	PF01032	FecCD transport family
AL522_RS06440	PF00005	ABC transporter
AL522_RS06445	PF00501	AMP-binding enzyme
AL522_RS06445	PF13193	AMP-binding enzyme C-terminal domain
AL522_RS06445	PF00668	Condensation domain
AL522_RS06445	PF00550	Phosphopantetheine attachment site
AL522_RS06445	PF00975	Thioesterase domain
AL522_RS06455	PF00756	Putative esterase
AL522_RS06455	PF11806	Domain of unknown function (DUF3327)
AL522_RS06460	PF07715	TonB-dependent Receptor Plug Domain
AL522_RS06460	PF00593	TonB dependent receptor
AL522_RS06465	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
AL522_RS06470	PF03449	Transcription elongation factor, N-terminal
AL522_RS06470	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL522_RS06475	PF01985	CRS1 / YhbY (CRM) domain
AL522_RS06480	PF01728	FtsJ-like methyltransferase
AL522_RS06485	PF01434	Peptidase family M41
AL522_RS06485	PF00004	ATPase family associated with various cellular activities (AAA)
AL522_RS06485	PF06480	FtsH Extracellular
AL522_RS06485	PF17862	AAA+ lid domain
AL522_RS06490	PF00809	Pterin binding enzyme
AL522_RS06495	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL522_RS06495	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL522_RS06495	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL522_RS06495	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL522_RS06500	PF03840	Preprotein translocase SecG subunit
AL522_RS06515	PF02576	RimP N-terminal domain
AL522_RS06515	PF17384	RimP C-terminal SH3 domain
AL522_RS06520	PF13184	NusA-like KH domain
AL522_RS06520	PF08529	NusA N-terminal domain
AL522_RS06520	PF00575	S1 RNA binding domain
AL522_RS06525	PF11987	Translation-initiation factor 2
AL522_RS06525	PF04760	Translation initiation factor IF-2, N-terminal region
AL522_RS06525	PF08364	Bacterial translation initiation factor IF-2 associated region
AL522_RS06525	PF00009	Elongation factor Tu GTP binding domain
AL522_RS06530	PF02033	Ribosome-binding factor A
AL522_RS06535	PF01509	TruB family pseudouridylate synthase (N terminal domain)
AL522_RS06535	PF16198	tRNA pseudouridylate synthase B C-terminal domain
AL522_RS06535	PF09157	Pseudouridine synthase II TruB, C-terminal
AL522_RS06540	PF00312	Ribosomal protein S15
AL522_RS06545	PF00575	S1 RNA binding domain
AL522_RS06545	PF03725	3' exoribonuclease family, domain 2
AL522_RS06545	PF01138	3' exoribonuclease family, domain 1
AL522_RS06545	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
AL522_RS06545	PF00013	KH domain
AL522_RS06550	PF07719	Tetratricopeptide repeat
AL522_RS06550	PF13181	Tetratricopeptide repeat
AL522_RS06555	PF00271	Helicase conserved C-terminal domain
AL522_RS06555	PF12343	Cold shock protein DEAD box A
AL522_RS06555	PF00270	DEAD/DEAH box helicase
AL522_RS06555	PF03880	DbpA RNA binding domain   
AL522_RS06565	PF12833	Helix-turn-helix domain
AL522_RS06565	PF06719	AraC-type transcriptional regulator N-terminus
AL522_RS06570	PF00296	Luciferase-like monooxygenase
AL522_RS06575	PF01136	Peptidase family U32
AL522_RS06580	PF01136	Peptidase family U32
AL522_RS06585	PF02036	SCP-2 sterol transfer family
AL522_RS06590	PF13508	Acetyltransferase (GNAT) domain
AL522_RS06595	PF01541	GIY-YIG catalytic domain
AL522_RS06605	PF01965	DJ-1/PfpI family
AL522_RS06610	PF13460	NAD(P)H-binding 
AL522_RS06620	PF03477	ATP cone domain
AL522_RS06620	PF13597	Anaerobic ribonucleoside-triphosphate reductase
AL522_RS06630	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS06635	PF01568	Molydopterin dinucleotide binding domain
AL522_RS06635	PF00384	Molybdopterin oxidoreductase
AL522_RS06640	PF00905	Penicillin binding protein transpeptidase domain
AL522_RS06640	PF03717	Penicillin-binding Protein dimerisation domain
AL522_RS06645	PF13533	Biotin-lipoyl like
AL522_RS06650	PF00873	AcrB/AcrD/AcrF family
AL522_RS06655	PF00873	AcrB/AcrD/AcrF family
AL522_RS06660	PF02321	Outer membrane efflux protein
AL522_RS06665	PF01553	Acyltransferase
AL522_RS06665	PF00501	AMP-binding enzyme
AL522_RS06670	PF07690	Major Facilitator Superfamily
AL522_RS06675	PF01042	Endoribonuclease L-PSP
AL522_RS06680	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
AL522_RS06680	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
AL522_RS06685	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AL522_RS06685	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AL522_RS06690	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AL522_RS06690	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AL522_RS06695	PF06877	Regulator of ribonuclease activity B
AL522_RS06700	PF06175	tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)
AL522_RS06715	PF00583	Acetyltransferase (GNAT) family
AL522_RS06720	PF10458	Valyl tRNA synthetase tRNA binding arm
AL522_RS06720	PF00133	tRNA synthetases class I (I, L, M and V)
AL522_RS06720	PF08264	Anticodon-binding domain of tRNA
AL522_RS06725	PF04364	DNA polymerase III chi subunit, HolC
AL522_RS06730	PF02789	Cytosol aminopeptidase family, N-terminal domain
AL522_RS06730	PF00883	Cytosol aminopeptidase family, catalytic domain
AL522_RS06735	PF03739	Lipopolysaccharide export system permease LptF/LptG
AL522_RS06740	PF03739	Lipopolysaccharide export system permease LptF/LptG
AL522_RS06745	PF01546	Peptidase family M20/M25/M40
AL522_RS06745	PF07687	Peptidase dimerisation domain
AL522_RS06755	PF02126	Phosphotriesterase family
AL522_RS06760	PF02653	Branched-chain amino acid transport system / permease component
AL522_RS06765	PF00005	ABC transporter
AL522_RS06770	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS06780	PF00294	pfkB family carbohydrate kinase
AL522_RS06795	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS06795	PF03466	LysR substrate binding domain
AL522_RS06800	PF04286	Protein of unknown function (DUF445)
AL522_RS06805	PF05872	Bacterial protein of unknown function (DUF853)
AL522_RS06820	PF05199	GMC oxidoreductase
AL522_RS06820	PF00732	GMC oxidoreductase
AL522_RS06825	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
AL522_RS06825	PF00034	Cytochrome c
AL522_RS06830	PF01914	MarC family integral membrane protein
AL522_RS06840	PF10696	Protein of unknown function (DUF2501)
AL522_RS06895	PF13356	Arm DNA-binding domain
AL522_RS06895	PF00589	Phage integrase family
AL522_RS06915	PF13362	Toprim domain
AL522_RS06915	PF08401	Domain of unknown function (DUF1738)
AL522_RS06915	PF18818	Metallopeptidase superfamily domain
AL522_RS06975	PF08845	Toxin SymE, type I toxin-antitoxin system
AL522_RS07005	PF00005	ABC transporter
AL522_RS07005	PF00664	ABC transporter transmembrane region
AL522_RS07005	PF03412	Peptidase C39 family
AL522_RS07020	PF03695	Uncharacterised protein family (UPF0149)
AL522_RS07020	PF02810	SEC-C motif
AL522_RS07025	PF00144	Beta-lactamase
AL522_RS07035	PF01266	FAD dependent oxidoreductase
AL522_RS07035	PF01266	FAD dependent oxidoreductase
AL522_RS07040	PF00005	ABC transporter
AL522_RS07045	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS07050	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL522_RS07055	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS07060	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS07060	PF00155	Aminotransferase class I and II
AL522_RS07075	PF00884	Sulfatase
AL522_RS07080	PF14552	Tautomerase enzyme
AL522_RS07085	PF03466	LysR substrate binding domain
AL522_RS07085	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS07105	PF07690	Major Facilitator Superfamily
AL522_RS07105	PF00083	Sugar (and other) transporter
AL522_RS07110	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS07115	PF01156	Inosine-uridine preferring nucleoside hydrolase
AL522_RS07120	PF04073	Aminoacyl-tRNA editing domain
AL522_RS07125	PF11575	FhuF 2Fe-2S C-terminal domain
AL522_RS07125	PF06276	Ferric iron reductase FhuF-like transporter
AL522_RS07130	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS07135	PF07256	Protein of unknown function (DUF1435)
AL522_RS07155	PF08468	Methyltransferase small domain N-terminal
AL522_RS07155	PF05175	Methyltransferase small domain
AL522_RS07160	PF03603	DNA polymerase III psi subunit
AL522_RS07165	PF00583	Acetyltransferase (GNAT) family
AL522_RS07170	PF13419	Haloacid dehalogenase-like hydrolase
AL522_RS07175	PF10144	Bacterial virulence factor haemolysin
AL522_RS07180	PF18429	Domain of unknown function (DUF5609)
AL522_RS07185	PF18073	Rubredoxin metal binding domain
AL522_RS07190	PF01381	Helix-turn-helix
AL522_RS07190	PF13521	AAA domain
AL522_RS07195	PF08240	Alcohol dehydrogenase GroES-like domain
AL522_RS07195	PF00107	Zinc-binding dehydrogenase
AL522_RS07200	PF03466	LysR substrate binding domain
AL522_RS07200	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS07205	PF12848	ABC transporter
AL522_RS07205	PF00005	ABC transporter
AL522_RS07210	PF00455	DeoR C terminal sensor domain
AL522_RS07210	PF08220	DeoR-like helix-turn-helix domain
AL522_RS07215	PF00005	ABC transporter
AL522_RS07220	PF00005	ABC transporter
AL522_RS07225	PF02653	Branched-chain amino acid transport system / permease component
AL522_RS07230	PF02653	Branched-chain amino acid transport system / permease component
AL522_RS07235	PF13458	Periplasmic binding protein
AL522_RS07240	PF07729	FCD domain
AL522_RS07240	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS07245	PF00289	Biotin carboxylase, N-terminal domain
AL522_RS07245	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL522_RS07245	PF02785	Biotin carboxylase C-terminal domain
AL522_RS07250	PF01425	Amidase
AL522_RS07255	PF01464	Transglycosylase SLT domain
AL522_RS07255	PF14718	Soluble lytic murein transglycosylase L domain
AL522_RS07260	PF01371	Trp repressor protein
AL522_RS07265	PF01931	Protein of unknown function DUF84
AL522_RS07270	PF00300	Histidine phosphatase superfamily (branch 1)
AL522_RS07275	PF12833	Helix-turn-helix domain
AL522_RS07275	PF06445	GyrI-like small molecule binding domain
AL522_RS07280	PF05981	CreA protein
AL522_RS07285	PF00486	Transcriptional regulatory protein, C terminal
AL522_RS07285	PF00072	Response regulator receiver domain
AL522_RS07290	PF00588	SpoU rRNA Methylase family
AL522_RS07295	PF03447	Homoserine dehydrogenase, NAD binding domain
AL522_RS07295	PF00742	Homoserine dehydrogenase
AL522_RS07295	PF13840	ACT domain 
AL522_RS07295	PF00696	Amino acid kinase family
AL522_RS07295	PF01842	ACT domain
AL522_RS07300	PF08544	GHMP kinases C terminal 
AL522_RS07300	PF00288	GHMP kinases N terminal domain
AL522_RS07305	PF14821	Threonine synthase N terminus
AL522_RS07305	PF00291	Pyridoxal-phosphate dependent enzyme
AL522_RS07310	PF03883	Peroxide stress protein YaaA
AL522_RS07315	PF00923	Transaldolase/Fructose-6-phosphate aldolase
AL522_RS07320	PF00994	Probable molybdopterin binding domain
AL522_RS07325	PF00083	Sugar (and other) transporter
AL522_RS07325	PF08946	Osmosensory transporter coiled coil
AL522_RS07330	PF01184	GPR1/FUN34/yaaH family
AL522_RS07335	PF00012	Hsp70 protein
AL522_RS07340	PF00226	DnaJ domain
AL522_RS07340	PF00684	DnaJ central domain
AL522_RS07340	PF01556	DnaJ C terminal domain
AL522_RS07345	PF06965	Na+/H+ antiporter 1
AL522_RS07350	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS07350	PF03466	LysR substrate binding domain
AL522_RS07355	PF01649	Ribosomal protein S20
AL522_RS07360	PF06574	FAD synthetase
AL522_RS07360	PF01687	Riboflavin kinase
AL522_RS07365	PF06827	Zinc finger found in FPG and IleRS
AL522_RS07365	PF00133	tRNA synthetases class I (I, L, M and V)
AL522_RS07365	PF08264	Anticodon-binding domain of tRNA
AL522_RS07370	PF01252	Signal peptidase (SPase) II
AL522_RS07375	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL522_RS07380	PF02401	LytB protein
AL522_RS07385	PF05173	Dihydrodipicolinate reductase, C-terminus
AL522_RS07385	PF01113	Dihydrodipicolinate reductase, N-terminus
AL522_RS07390	PF00117	Glutamine amidotransferase class-I
AL522_RS07390	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
AL522_RS07395	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AL522_RS07395	PF02142	MGS-like domain
AL522_RS07395	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL522_RS07405	PF00186	Dihydrofolate reductase
AL522_RS07415	PF00149	Calcineurin-like phosphoesterase
AL522_RS07420	PF04379	ApaG domain 
AL522_RS07425	PF00398	Ribosomal RNA adenine dimethylase
AL522_RS07430	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
AL522_RS07435	PF00639	PPIC-type PPIASE domain
AL522_RS07435	PF09312	SurA N-terminal domain
AL522_RS07440	PF03968	OstA-like protein
AL522_RS07440	PF04453	LPS transport system D
AL522_RS07445	PF05099	Tellurite resistance protein TerB
AL522_RS07445	PF00226	DnaJ domain
AL522_RS07450	PF00849	RNA pseudouridylate synthase
AL522_RS07455	PF18339	RapA N-terminal Tudor like domain 1
AL522_RS07455	PF00176	SNF2 family N-terminal domain
AL522_RS07455	PF18337	RapA N-terminal Tudor like domain
AL522_RS07455	PF12137	RNA polymerase recycling family C-terminal
AL522_RS07455	PF00271	Helicase conserved C-terminal domain
AL522_RS07460	PF00136	DNA polymerase family B
AL522_RS07460	PF03104	DNA polymerase family B, exonuclease domain
AL522_RS07465	PF09335	SNARE associated Golgi protein
AL522_RS07470	PF00005	ABC transporter
AL522_RS07475	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS07485	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL522_RS07485	PF12793	Sugar transport-related sRNA regulator N-term
AL522_RS07490	PF07690	Major Facilitator Superfamily
AL522_RS07495	PF00694	Aconitase C-terminal domain
AL522_RS07500	PF00330	Aconitase family (aconitate hydratase)
AL522_RS07505	PF00180	Isocitrate/isopropylmalate dehydrogenase
AL522_RS07510	PF00682	HMGL-like
AL522_RS07510	PF08502	LeuA allosteric (dimerisation) domain
AL522_RS07515	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL522_RS07515	PF00205	Thiamine pyrophosphate enzyme, central domain
AL522_RS07515	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL522_RS07520	PF10369	Small subunit of acetolactate synthase
AL522_RS07525	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS07525	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL522_RS07530	PF02381	MraZ protein, putative antitoxin-like
AL522_RS07535	PF01795	MraW methylase family
AL522_RS07540	PF04999	Cell division protein FtsL
AL522_RS07545	PF03717	Penicillin-binding Protein dimerisation domain
AL522_RS07545	PF00905	Penicillin binding protein transpeptidase domain
AL522_RS07550	PF01225	Mur ligase family, catalytic domain
AL522_RS07550	PF02875	Mur ligase family, glutamate ligase domain
AL522_RS07550	PF08245	Mur ligase middle domain
AL522_RS07555	PF08245	Mur ligase middle domain
AL522_RS07555	PF02875	Mur ligase family, glutamate ligase domain
AL522_RS07555	PF01225	Mur ligase family, catalytic domain
AL522_RS07560	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
AL522_RS07560	PF00953	Glycosyl transferase family 4
AL522_RS07565	PF08245	Mur ligase middle domain
AL522_RS07565	PF02875	Mur ligase family, glutamate ligase domain
AL522_RS07570	PF01098	Cell cycle protein
AL522_RS07575	PF04101	Glycosyltransferase family 28 C-terminal domain
AL522_RS07575	PF03033	Glycosyltransferase family 28 N-terminal domain
AL522_RS07580	PF01225	Mur ligase family, catalytic domain
AL522_RS07580	PF02875	Mur ligase family, glutamate ligase domain
AL522_RS07580	PF08245	Mur ligase middle domain
AL522_RS07585	PF01820	D-ala D-ala ligase N-terminus
AL522_RS07585	PF07478	D-ala D-ala ligase C-terminus
AL522_RS07590	PF08478	POTRA domain, FtsQ-type
AL522_RS07590	PF03799	Cell division protein FtsQ
AL522_RS07595	PF02491	SHS2 domain inserted in FTSA
AL522_RS07600	PF12327	FtsZ family, C-terminal domain
AL522_RS07600	PF00091	Tubulin/FtsZ family, GTPase domain
AL522_RS07605	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
AL522_RS07610	PF06558	Secretion monitor precursor protein (SecM)
AL522_RS07615	PF02810	SEC-C motif
AL522_RS07615	PF07516	SecA Wing and Scaffold domain
AL522_RS07615	PF07517	SecA DEAD-like domain
AL522_RS07615	PF01043	SecA preprotein cross-linking domain
AL522_RS07620	PF00293	NUDIX domain
AL522_RS07625	PF03884	DNA gyrase inhibitor YacG
AL522_RS07630	PF07072	Cell division protein
AL522_RS07635	PF01121	Dephospho-CoA kinase
AL522_RS07640	PF00478	IMP dehydrogenase / GMP reductase domain
AL522_RS07645	PF00482	Type II secretion system (T2SS), protein F
AL522_RS07650	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
AL522_RS07650	PF00437	Type II/IV secretion system protein
AL522_RS07655	PF07963	Prokaryotic N-terminal methylation motif
AL522_RS07660	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
AL522_RS07660	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
AL522_RS07665	PF01510	N-acetylmuramoyl-L-alanine amidase
AL522_RS07670	PF17113	Regulatory signalling modulator protein AmpE
AL522_RS07675	PF05270	Alpha-L-arabinofuranosidase B (ABFB) domain
AL522_RS07675	PF04616	Glycosyl hydrolases family 43
AL522_RS07685	PF00324	Amino acid permease
AL522_RS07690	PF07729	FCD domain
AL522_RS07690	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS07695	PF17831	Pyruvate dehydrogenase E1 component middle domain
AL522_RS07695	PF00456	Transketolase, thiamine diphosphate binding domain
AL522_RS07700	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL522_RS07700	PF00364	Biotin-requiring enzyme
AL522_RS07700	PF02817	e3 binding domain
AL522_RS07705	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL522_RS07705	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL522_RS07735	PF05870	Phenolic acid decarboxylase (PAD)
AL522_RS07740	PF00330	Aconitase family (aconitate hydratase)
AL522_RS07740	PF06434	Aconitate hydratase 2 N-terminus
AL522_RS07740	PF11791	Aconitate B N-terminal domain
AL522_RS07745	PF06062	Uncharacterised protein family (UPF0231)
AL522_RS07750	PF00465	Iron-containing alcohol dehydrogenase 
AL522_RS07755	PF07005	Sugar-binding N-terminal domain
AL522_RS07755	PF17042	Nucleotide-binding C-terminal domain
AL522_RS07760	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
AL522_RS07765	PF00455	DeoR C terminal sensor domain
AL522_RS07765	PF08220	DeoR-like helix-turn-helix domain
AL522_RS07770	PF00295	Glycosyl hydrolases family 28
AL522_RS07775	PF02675	S-adenosylmethionine decarboxylase 
AL522_RS07780	PF17284	Spermidine synthase tetramerisation domain
AL522_RS07785	PF09691	Type II secretion system pilotin lipoprotein (PulS_OutS)
AL522_RS07790	PF00394	Multicopper oxidase
AL522_RS07790	PF07731	Multicopper oxidase
AL522_RS07790	PF07732	Multicopper oxidase
AL522_RS07795	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL522_RS07800	PF00156	Phosphoribosyl transferase domain
AL522_RS07805	PF00484	Carbonic anhydrase
AL522_RS07810	PF00005	ABC transporter
AL522_RS07815	PF01061	ABC-2 type transporter
AL522_RS07825	PF02261	Aspartate decarboxylase
AL522_RS07830	PF02569	Pantoate-beta-alanine ligase
AL522_RS07835	PF02548	Ketopantoate hydroxymethyltransferase
AL522_RS07840	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AL522_RS07845	PF01743	Poly A polymerase head domain
AL522_RS07845	PF12626	Polymerase A arginine-rich C-terminus
AL522_RS07845	PF12627	Probable RNA and SrmB- binding site of polymerase A
AL522_RS07850	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL522_RS07855	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AL522_RS07860	PF17746	SfsA N-terminal OB domain
AL522_RS07860	PF03749	Sugar fermentation stimulation protein RE domain
AL522_RS07865	PF02834	LigT like Phosphoesterase
AL522_RS07870	PF00270	DEAD/DEAH box helicase
AL522_RS07870	PF00271	Helicase conserved C-terminal domain
AL522_RS07870	PF04408	Helicase associated domain (HA2)
AL522_RS07870	PF08482	ATP-dependent helicase C-terminal
AL522_RS07875	PF14814	Bifunctional transglycosylase second domain
AL522_RS07875	PF00912	Transglycosylase
AL522_RS07875	PF14812	Transmembrane domain of transglycosylase PBP1 at N-terminal
AL522_RS07875	PF00905	Penicillin binding protein transpeptidase domain
AL522_RS07880	PF00593	TonB dependent receptor
AL522_RS07880	PF07715	TonB-dependent Receptor Plug Domain
AL522_RS07885	PF00005	ABC transporter
AL522_RS07890	PF01497	Periplasmic binding protein
AL522_RS07895	PF01032	FecCD transport family
AL522_RS07900	PF00202	Aminotransferase class-III
AL522_RS07905	PF01521	Iron-sulphur cluster biosynthesis
AL522_RS07915	PF01497	Periplasmic binding protein
AL522_RS07920	PF01048	Phosphorylase superfamily
AL522_RS07925	PF13286	Phosphohydrolase-associated domain
AL522_RS07925	PF01966	HD domain
AL522_RS07930	PF00595	PDZ domain
AL522_RS07935	PF13556	PucR C-terminal helix-turn-helix domain
AL522_RS07935	PF05651	Putative sugar diacid recognition
AL522_RS07935	PF17853	GGDEF-like domain
AL522_RS07940	PF11944	Protein of unknown function (DUF3461)
AL522_RS07945	PF14602	Hexapeptide repeat of succinyl-transferase
AL522_RS07945	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
AL522_RS07945	PF00132	Bacterial transferase hexapeptide (six repeats)
AL522_RS07950	PF01909	Nucleotidyltransferase domain
AL522_RS07950	PF01966	HD domain
AL522_RS07950	PF08335	GlnD PII-uridylyltransferase
AL522_RS07950	PF01842	ACT domain
AL522_RS07955	PF00557	Metallopeptidase family M24
AL522_RS07960	PF00318	Ribosomal protein S2
AL522_RS07965	PF00889	Elongation factor TS
AL522_RS07970	PF00696	Amino acid kinase family
AL522_RS07975	PF01765	Ribosome recycling factor
AL522_RS07980	PF13288	DXP reductoisomerase C-terminal domain
AL522_RS07980	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
AL522_RS07980	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
AL522_RS07985	PF01255	Putative undecaprenyl diphosphate synthase
AL522_RS07995	PF17820	PDZ domain
AL522_RS07995	PF02163	Peptidase family M50
AL522_RS08000	PF07244	Surface antigen variable number repeat
AL522_RS08000	PF01103	Surface antigen
AL522_RS08005	PF03938	Outer membrane protein (OmpH-like)
AL522_RS08010	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
AL522_RS08010	PF00132	Bacterial transferase hexapeptide (six repeats)
AL522_RS08015	PF07977	FabA-like domain
AL522_RS08020	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
AL522_RS08020	PF00132	Bacterial transferase hexapeptide (six repeats)
AL522_RS08025	PF02684	Lipid-A-disaccharide synthetase
AL522_RS08030	PF01351	Ribonuclease HII
AL522_RS08035	PF01336	OB-fold nucleic acid binding domain
AL522_RS08035	PF07733	Bacterial DNA polymerase III alpha NTPase domain
AL522_RS08035	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
AL522_RS08035	PF14579	Helix-hairpin-helix motif
AL522_RS08035	PF02811	PHP domain
AL522_RS08040	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
AL522_RS08045	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AL522_RS08045	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AL522_RS08045	PF01276	Orn/Lys/Arg decarboxylase, major domain
AL522_RS08050	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL522_RS08055	PF01171	PP-loop family
AL522_RS08055	PF11734	TilS substrate C-terminal domain
AL522_RS08055	PF09179	TilS substrate binding domain
AL522_RS08060	PF00034	Cytochrome c
AL522_RS08065	PF07073	Modulator of Rho-dependent transcription termination (ROF)
AL522_RS08070	PF06786	Uncharacterised protein family (UPF0253)
AL522_RS08075	PF00472	RF-1 domain
AL522_RS08080	PF03129	Anticodon binding domain
AL522_RS08080	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL522_RS08080	PF04073	Aminoacyl-tRNA editing domain
AL522_RS08085	PF18389	TrmO C-terminal domain
AL522_RS08085	PF01980	tRNA-methyltransferase O
AL522_RS08090	PF16358	RcsF lipoprotein
AL522_RS08095	PF03180	NLPA lipoprotein
AL522_RS08100	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS08105	PF09383	NIL domain
AL522_RS08105	PF00005	ABC transporter
AL522_RS08140	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS08140	PF03466	LysR substrate binding domain
AL522_RS08145	PF03372	Endonuclease/Exonuclease/phosphatase family
AL522_RS08150	PF01476	LysM domain
AL522_RS08150	PF01464	Transglycosylase SLT domain
AL522_RS08155	PF00753	Metallo-beta-lactamase superfamily
AL522_RS08155	PF16123	Hydroxyacylglutathione hydrolase C-terminus
AL522_RS08160	PF08241	Methyltransferase domain
AL522_RS08165	PF00075	RNase H
AL522_RS08170	PF00929	Exonuclease
AL522_RS08180	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
AL522_RS08190	PF01177	Asp/Glu/Hydantoin racemase
AL522_RS08205	PF01425	Amidase
AL522_RS08230	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS08235	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS08240	PF00005	ABC transporter
AL522_RS08245	PF00266	Aminotransferase class-V
AL522_RS08250	PF01546	Peptidase family M20/M25/M40
AL522_RS08250	PF07687	Peptidase dimerisation domain
AL522_RS08260	PF00576	HIUase/Transthyretin family
AL522_RS08265	PF00795	Carbon-nitrogen hydrolase
AL522_RS08270	PF00155	Aminotransferase class I and II
AL522_RS08275	PF00596	Class II Aldolase and Adducin N-terminal domain
AL522_RS08285	PF03079	ARD/ARD' family
AL522_RS08290	PF01008	Initiation factor 2 subunit family
AL522_RS08295	PF01636	Phosphotransferase enzyme family
AL522_RS08300	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
AL522_RS08300	PF09317	Domain of unknown function (DUF1974)
AL522_RS08300	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL522_RS08300	PF02770	Acyl-CoA dehydrogenase, middle domain
AL522_RS08305	PF13580	SIS domain
AL522_RS08310	PF13230	Glutamine amidotransferases class-II
AL522_RS08315	PF03734	L,D-transpeptidase catalytic domain
AL522_RS08320	PF00817	impB/mucB/samB family
AL522_RS08320	PF11799	impB/mucB/samB family C-terminal domain
AL522_RS08320	PF11798	IMS family HHH motif
AL522_RS08330	PF02653	Branched-chain amino acid transport system / permease component
AL522_RS08335	PF00005	ABC transporter
AL522_RS08340	PF07687	Peptidase dimerisation domain
AL522_RS08340	PF01546	Peptidase family M20/M25/M40
AL522_RS08345	PF00156	Phosphoribosyl transferase domain
AL522_RS08350	PF06500	Alpha/beta hydrolase of unknown function (DUF1100)
AL522_RS08355	PF07417	Sigma factor-binding transcriptional regulator Crl
AL522_RS08360	PF00267	Gram-negative porin
AL522_RS08365	PF01472	PUA domain
AL522_RS08365	PF00696	Amino acid kinase family
AL522_RS08370	PF00171	Aldehyde dehydrogenase family
AL522_RS08400	PF09008	Head binding
AL522_RS08415	PF00313	'Cold-shock' DNA-binding domain
AL522_RS08420	PF02203	Tar ligand binding domain homologue
AL522_RS08420	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL522_RS08420	PF00672	HAMP domain
AL522_RS08430	PF00072	Response regulator receiver domain
AL522_RS08430	PF01584	CheW-like domain
AL522_RS08440	PF03880	DbpA RNA binding domain   
AL522_RS08440	PF00270	DEAD/DEAH box helicase
AL522_RS08440	PF00271	Helicase conserved C-terminal domain
AL522_RS08450	PF07969	Amidohydrolase family
AL522_RS08460	PF07690	Major Facilitator Superfamily
AL522_RS08465	PF02652	L-lactate permease
AL522_RS08470	PF07729	FCD domain
AL522_RS08470	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS08475	PF01070	FMN-dependent dehydrogenase
AL522_RS08480	PF02566	OsmC-like protein
AL522_RS08500	PF08448	PAS fold
AL522_RS08500	PF08447	PAS fold
AL522_RS08500	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS08500	PF00563	EAL domain
AL522_RS08520	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
AL522_RS08520	PF02837	Glycosyl hydrolases family 2, sugar binding domain
AL522_RS08520	PF00703	Glycosyl hydrolases family 2
AL522_RS08520	PF16353	Domain of unknown function(DUF4981)
AL522_RS08520	PF02929	Beta galactosidase small chain
AL522_RS08525	PF10796	Sigma-S stabilisation anti-adaptor protein 
AL522_RS08530	PF07769	psiF repeat
AL522_RS08535	PF14759	Reductase C-terminal
AL522_RS08535	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL522_RS08540	PF03807	NADP oxidoreductase coenzyme F420-dependent
AL522_RS08540	PF14748	Pyrroline-5-carboxylate reductase dimerisation
AL522_RS08545	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
AL522_RS08550	PF09849	Uncharacterized protein conserved in bacteria (DUF2076)
AL522_RS08555	PF01202	Shikimate kinase
AL522_RS08560	PF16362	YaiA protein
AL522_RS08565	PF01614	Bacterial transcriptional regulator
AL522_RS08565	PF09339	IclR helix-turn-helix domain
AL522_RS08580	PF07302	AroM protein
AL522_RS08585	PF06865	Pyrimidine/purine nucleoside phosphorylase
AL522_RS08590	PF04381	Putative exonuclease, RdgC
AL522_RS08595	PF00480	ROK family
AL522_RS08610	PF12625	Arabinose-binding domain of AraC transcription regulator, N-term
AL522_RS08610	PF12833	Helix-turn-helix domain
AL522_RS08620	PF03783	Curli production assembly/transport component CsgG
AL522_RS08630	PF05643	Putative bacterial lipoprotein (DUF799)
AL522_RS08635	PF13476	AAA domain
AL522_RS08640	PF00149	Calcineurin-like phosphoesterase
AL522_RS08640	PF12320	Type 5 capsule protein repressor C-terminal domain
AL522_RS08645	PF00486	Transcriptional regulatory protein, C terminal
AL522_RS08645	PF00072	Response regulator receiver domain
AL522_RS08650	PF00989	PAS fold
AL522_RS08650	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS08650	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS08650	PF11808	Phosphate regulon sensor protein PhoR
AL522_RS08655	PF12849	PBP superfamily domain
AL522_RS08660	PF01717	Cobalamin-independent synthase, Catalytic domain
AL522_RS08665	PF05525	Branched-chain amino acid transport protein
AL522_RS08670	PF00324	Amino acid permease
AL522_RS08680	PF00459	Inositol monophosphatase family
AL522_RS08685	PF04336	Acyl carrier protein phosphodiesterase
AL522_RS08690	PF02547	Queuosine biosynthesis protein
AL522_RS08695	PF00589	Phage integrase family
AL522_RS08720	PF06440	DNA polymerase III, theta subunit
AL522_RS08750	PF00436	Single-strand binding protein family
AL522_RS08815	PF12961	Domain of unknown function (DUF3850)
AL522_RS08835	PF05772	NinB protein
AL522_RS08920	PF10668	Phage terminase small subunit
AL522_RS08920	PF03592	Terminase small subunit 
AL522_RS09045	PF01757	Acyltransferase family
AL522_RS09060	PF00717	Peptidase S24-like
AL522_RS09065	PF01702	Queuine tRNA-ribosyltransferase
AL522_RS09070	PF02699	Preprotein translocase subunit
AL522_RS09075	PF07549	SecD/SecF GG Motif
AL522_RS09075	PF02355	Protein export membrane protein
AL522_RS09075	PF13721	SecD export protein N-terminal TM region
AL522_RS09080	PF07549	SecD/SecF GG Motif
AL522_RS09080	PF02355	Protein export membrane protein
AL522_RS09085	PF11622	Protein of unknown function (DUF3251)
AL522_RS09090	PF04972	BON domain
AL522_RS09090	PF01476	LysM domain
AL522_RS09095	PF03477	ATP cone domain
AL522_RS09100	PF01872	RibD C-terminal domain
AL522_RS09100	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL522_RS09105	PF00885	6,7-dimethyl-8-ribityllumazine synthase
AL522_RS09110	PF01029	NusB family
AL522_RS09115	PF00586	AIR synthase related protein, N-terminal domain
AL522_RS09115	PF02769	AIR synthase related protein, C-terminal domain
AL522_RS09120	PF04608	Phosphatidylglycerophosphatase A
AL522_RS09125	PF00248	Aldo/keto reductase family
AL522_RS09130	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
AL522_RS09130	PF02780	Transketolase, C-terminal domain
AL522_RS09130	PF02779	Transketolase, pyrimidine binding domain
AL522_RS09135	PF00348	Polyprenyl synthetase
AL522_RS09140	PF02609	Exonuclease VII small subunit
AL522_RS09145	PF02568	Thiamine biosynthesis protein (ThiI)
AL522_RS09145	PF02926	THUMP domain
AL522_RS09150	PF01965	DJ-1/PfpI family
AL522_RS09155	PF08546	Ketopantoate reductase PanE/ApbA C terminal
AL522_RS09155	PF02558	Ketopantoate reductase PanE/ApbA
AL522_RS09160	PF04461	Protein of unknown function (DUF520)
AL522_RS09165	PF07690	Major Facilitator Superfamily
AL522_RS09170	PF01040	UbiA prenyltransferase family
AL522_RS09175	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
AL522_RS09180	PF00510	Cytochrome c oxidase subunit III
AL522_RS09185	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AL522_RS09190	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AL522_RS09190	PF06481	COX Aromatic Rich Motif
AL522_RS09195	PF07690	Major Facilitator Superfamily
AL522_RS09200	PF03923	Uncharacterized lipoprotein
AL522_RS09200	PF08139	Prokaryotic membrane lipoprotein lipid attachment site
AL522_RS09205	PF01722	BolA-like protein
AL522_RS09210	PF05697	Bacterial trigger factor protein (TF)
AL522_RS09210	PF05698	Bacterial trigger factor protein (TF) C-terminus
AL522_RS09210	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL522_RS09215	PF00574	Clp protease
AL522_RS09220	PF06689	ClpX C4-type zinc finger
AL522_RS09220	PF10431	C-terminal, D2-small domain, of ClpB protein 
AL522_RS09220	PF07724	AAA domain (Cdc48 subfamily)
AL522_RS09225	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL522_RS09225	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
AL522_RS09225	PF00004	ATPase family associated with various cellular activities (AAA)
AL522_RS09230	PF00216	Bacterial DNA-binding protein
AL522_RS09235	PF13145	PPIC-type PPIASE domain
AL522_RS09250	PF06508	Queuosine biosynthesis protein QueC
AL522_RS09255	PF12793	Sugar transport-related sRNA regulator N-term
AL522_RS09255	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL522_RS09265	PF00291	Pyridoxal-phosphate dependent enzyme
AL522_RS09270	PF13404	AsnC-type helix-turn-helix domain
AL522_RS09270	PF01037	Lrp/AsnC ligand binding domain
AL522_RS09275	PF00664	ABC transporter transmembrane region
AL522_RS09275	PF00005	ABC transporter
AL522_RS09280	PF00005	ABC transporter
AL522_RS09280	PF00664	ABC transporter transmembrane region
AL522_RS09285	PF00543	Nitrogen regulatory protein P-II
AL522_RS09290	PF00909	Ammonium Transporter Family
AL522_RS09300	PF09619	Type III secretion system lipoprotein chaperone (YscW)
AL522_RS09305	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AL522_RS09315	PF05321	Haemolysin expression modulating protein
AL522_RS09320	PF10757	Biofilm formation regulator YbaJ
AL522_RS09330	PF00005	ABC transporter
AL522_RS09335	PF00950	ABC 3 transport family
AL522_RS09340	PF01297	Zinc-uptake complex component A periplasmic
AL522_RS09345	PF01197	Ribosomal protein L31
AL522_RS09350	PF00873	AcrB/AcrD/AcrF family
AL522_RS09355	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL522_RS09355	PF00529	HlyD membrane-fusion protein of T1SS
AL522_RS09360	PF08361	MAATS-type transcriptional repressor, C-terminal region
AL522_RS09360	PF00440	Bacterial regulatory proteins, tetR family
AL522_RS09365	PF04226	Transglycosylase associated protein
AL522_RS09375	PF04304	Protein of unknown function (DUF454)
AL522_RS09380	PF00156	Phosphoribosyl transferase domain
AL522_RS09385	PF12169	DNA polymerase III subunits gamma and tau domain III
AL522_RS09385	PF12168	DNA polymerase III subunits tau domain IV DnaB-binding
AL522_RS09385	PF12170	DNA polymerase III tau subunit V interacting with alpha
AL522_RS09390	PF02575	YbaB/EbfC DNA-binding family
AL522_RS09395	PF02132	RecR protein
AL522_RS09395	PF13662	Toprim domain
AL522_RS09400	PF00183	Hsp90 protein
AL522_RS09400	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS09410	PF05191	Adenylate kinase, active site lid
AL522_RS09415	PF00762	Ferrochelatase
AL522_RS09420	PF00294	pfkB family carbohydrate kinase
AL522_RS09425	PF02254	TrkA-N domain
AL522_RS09425	PF00999	Sodium/hydrogen exchanger family
AL522_RS09430	PF02872	5'-nucleotidase, C-terminal domain
AL522_RS09430	PF00149	Calcineurin-like phosphoesterase
AL522_RS09440	PF03466	LysR substrate binding domain
AL522_RS09440	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS09445	PF04073	Aminoacyl-tRNA editing domain
AL522_RS09450	PF01963	TraB family
AL522_RS09455	PF00403	Heavy-metal-associated domain
AL522_RS09460	PF13411	MerR HTH family regulatory protein
AL522_RS09465	PF01957	NfeD-like C-terminal, partner-binding
AL522_RS09470	PF16200	C-terminal region of band_7
AL522_RS09470	PF01145	SPFH domain / Band 7 family
AL522_RS09475	PF00085	Thioredoxin
AL522_RS09480	PF00106	short chain dehydrogenase
AL522_RS09485	PF13472	GDSL-like Lipase/Acylhydrolase family
AL522_RS09490	PF00005	ABC transporter
AL522_RS09500	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
AL522_RS09500	PF02222	ATP-grasp domain
AL522_RS09505	PF00731	AIR carboxylase
AL522_RS09510	PF12850	Calcineurin-like phosphoesterase superfamily domain
AL522_RS09515	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AL522_RS09520	PF09190	DALR domain
AL522_RS09520	PF01406	tRNA synthetases class I (C) catalytic domain
AL522_RS09525	PF13476	AAA domain
AL522_RS09535	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
AL522_RS09535	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
AL522_RS09540	PF06711	Protein of unknown function (DUF1198)
AL522_RS09580	PF01427	D-ala-D-ala dipeptidase
AL522_RS09600	PF01544	CorA-like Mg2+ transporter protein
AL522_RS09610	PF00781	Diacylglycerol kinase catalytic domain
AL522_RS09620	PF13811	Domain of unknown function (DUF4186)
AL522_RS09630	PF01594	AI-2E family transporter
AL522_RS09645	PF04239	Protein of unknown function (DUF421)
AL522_RS09660	PF00107	Zinc-binding dehydrogenase
AL522_RS09660	PF13823	Alcohol dehydrogenase GroES-associated
AL522_RS09660	PF08240	Alcohol dehydrogenase GroES-like domain
AL522_RS09690	PF00465	Iron-containing alcohol dehydrogenase 
AL522_RS09695	PF02447	GntP family permease
AL522_RS09705	PF00313	'Cold-shock' DNA-binding domain
AL522_RS09720	PF09084	NMT1/THI5 like
AL522_RS09725	PF00795	Carbon-nitrogen hydrolase
AL522_RS09735	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS09740	PF00005	ABC transporter
AL522_RS09745	PF02416	mttA/Hcf106 family
AL522_RS09750	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
AL522_RS09750	PF04055	Radical SAM superfamily
AL522_RS09755	PF03099	Biotin/lipoate A/B protein ligase family
AL522_RS09760	PF04359	Protein of unknown function (DUF493)
AL522_RS09765	PF07943	Penicillin-binding protein 5, C-terminal domain
AL522_RS09765	PF00768	D-alanyl-D-alanine carboxypeptidase
AL522_RS09770	PF03330	Lytic transglycolase
AL522_RS09770	PF05036	Sporulation related domain
AL522_RS09775	PF01098	Cell cycle protein
AL522_RS09780	PF03717	Penicillin-binding Protein dimerisation domain
AL522_RS09780	PF00905	Penicillin binding protein transpeptidase domain
AL522_RS09785	PF02590	Predicted SPOUT methyltransferase
AL522_RS09795	PF01467	Cytidylyltransferase-like
AL522_RS09800	PF14840	Processivity clamp loader gamma complex DNA pol III C-term
AL522_RS09800	PF06144	DNA polymerase III, delta subunit
AL522_RS09805	PF04390	Lipopolysaccharide-assembly
AL522_RS09810	PF08264	Anticodon-binding domain of tRNA
AL522_RS09810	PF00133	tRNA synthetases class I (I, L, M and V)
AL522_RS09810	PF13603	Leucyl-tRNA synthetase, Domain 2
AL522_RS09815	PF07295	Zinc-ribbon containing domain
AL522_RS09820	PF00005	ABC transporter
AL522_RS09825	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS09830	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS09835	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL522_RS09840	PF00795	Carbon-nitrogen hydrolase
AL522_RS09845	PF00571	CBS domain
AL522_RS09845	PF03471	Transporter associated domain
AL522_RS09850	PF02130	Uncharacterized protein family UPF0054
AL522_RS09855	PF02562	PhoH-like protein
AL522_RS09860	PF04055	Radical SAM superfamily
AL522_RS09860	PF00919	Uncharacterized protein family UPF0004
AL522_RS09860	PF01938	TRAM domain
AL522_RS09865	PF01494	FAD binding domain
AL522_RS09905	PF13537	Glutamine amidotransferase domain
AL522_RS09905	PF00733	Asparagine synthase
AL522_RS09910	PF13344	Haloacid dehalogenase-like hydrolase
AL522_RS09915	PF00480	ROK family
AL522_RS09915	PF01047	MarR family
AL522_RS09920	PF01979	Amidohydrolase family
AL522_RS09925	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
AL522_RS09935	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
AL522_RS09935	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL522_RS09945	PF01475	Ferric uptake regulator family
AL522_RS09950	PF00258	Flavodoxin
AL522_RS09955	PF01402	Ribbon-helix-helix protein, copG family
AL522_RS09960	PF12697	Alpha/beta hydrolase family
AL522_RS09965	PF03925	SeqA protein C-terminal domain
AL522_RS09965	PF17206	SeqA protein N-terminal domain
AL522_RS09970	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL522_RS09970	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL522_RS09970	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL522_RS09970	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL522_RS09975	PF00486	Transcriptional regulatory protein, C terminal
AL522_RS09975	PF00072	Response regulator receiver domain
AL522_RS09980	PF10725	Protein of unknown function (DUF2517)
AL522_RS09985	PF08349	Protein of unknown function (DUF1722)
AL522_RS09990	PF03441	FAD binding domain of DNA photolyase
AL522_RS09990	PF00875	DNA photolyase
AL522_RS09995	PF01784	NIF3 (NGG1p interacting factor 3)
AL522_RS10000	PF02682	Carboxyltransferase domain, subdomain C and D
AL522_RS10005	PF02626	Carboxyltransferase domain, subdomain A and B 
AL522_RS10010	PF03746	LamB/YcsF family
AL522_RS10025	PF01470	Pyroglutamyl peptidase
AL522_RS10030	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
AL522_RS10030	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
AL522_RS10030	PF06827	Zinc finger found in FPG and IleRS
AL522_RS10035	PF00285	Citrate synthase, C-terminal domain
AL522_RS10040	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AL522_RS10045	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AL522_RS10050	PF00890	FAD binding domain
AL522_RS10050	PF02910	Fumarate reductase flavoprotein C-term
AL522_RS10055	PF13085	2Fe-2S iron-sulfur cluster binding domain
AL522_RS10060	PF02779	Transketolase, pyrimidine binding domain
AL522_RS10060	PF16870	2-oxoglutarate dehydrogenase C-terminal
AL522_RS10060	PF00676	Dehydrogenase E1 component
AL522_RS10060	PF16078	2-oxoglutarate dehydrogenase N-terminus
AL522_RS10065	PF02817	e3 binding domain
AL522_RS10065	PF00364	Biotin-requiring enzyme
AL522_RS10065	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AL522_RS10070	PF08442	ATP-grasp domain
AL522_RS10070	PF00549	CoA-ligase
AL522_RS10075	PF00549	CoA-ligase
AL522_RS10075	PF02629	CoA binding domain
AL522_RS10080	PF01654	Cytochrome bd terminal oxidase subunit I
AL522_RS10085	PF02322	Cytochrome bd terminal oxidase subunit II
AL522_RS10090	PF08173	Membrane bound YbgT-like protein
AL522_RS10095	PF09600	Cyd operon protein YbgE (Cyd_oper_YbgE)
AL522_RS10100	PF03061	Thioesterase superfamily
AL522_RS10105	PF01618	MotA/TolQ/ExbB proton channel family
AL522_RS10110	PF02472	Biopolymer transport protein ExbD/TolR
AL522_RS10115	PF06519	TolA C-terminal
AL522_RS10120	PF07676	WD40-like Beta Propeller Repeat
AL522_RS10120	PF04052	TolB amino-terminal domain
AL522_RS10125	PF00691	OmpA family
AL522_RS10130	PF13174	Tetratricopeptide repeat
AL522_RS10130	PF16331	TolA binding protein trimerisation
AL522_RS10155	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL522_RS10155	PF12833	Helix-turn-helix domain
AL522_RS10155	PF06029	AlkA N-terminal domain
AL522_RS10155	PF02805	Metal binding domain of Ada
AL522_RS10160	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
AL522_RS10160	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
AL522_RS10165	PF02445	Quinolinate synthetase A protein
AL522_RS10170	PF04973	Nicotinamide mononucleotide transporter
AL522_RS10175	PF01545	Cation efflux family
AL522_RS10180	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS10180	PF01627	Hpt domain
AL522_RS10180	PF00072	Response regulator receiver domain
AL522_RS10180	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL522_RS10180	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS10185	PF00196	Bacterial regulatory proteins, luxR family
AL522_RS10185	PF00072	Response regulator receiver domain
AL522_RS10195	PF00793	DAHP synthetase I family
AL522_RS10200	PF00300	Histidine phosphatase superfamily (branch 1)
AL522_RS10205	PF01263	Aldose 1-epimerase
AL522_RS10210	PF00288	GHMP kinases N terminal domain
AL522_RS10210	PF10509	Galactokinase galactose-binding signature
AL522_RS10210	PF08544	GHMP kinases C terminal 
AL522_RS10215	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
AL522_RS10215	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
AL522_RS10220	PF00005	ABC transporter
AL522_RS10225	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS10225	PF03459	TOBE domain
AL522_RS10230	PF10766	Multidrug efflux pump-associated protein AcrZ
AL522_RS10240	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS10245	PF00005	ABC transporter
AL522_RS10245	PF03459	TOBE domain
AL522_RS10255	PF10282	Lactonase, 7-bladed beta-propeller
AL522_RS10265	PF01161	Phosphatidylethanolamine-binding protein
AL522_RS10270	PF00202	Aminotransferase class-III
AL522_RS10275	PF06968	Biotin and Thiamin Synthesis associated domain
AL522_RS10275	PF04055	Radical SAM superfamily
AL522_RS10285	PF08241	Methyltransferase domain
AL522_RS10295	PF00005	ABC transporter
AL522_RS10300	PF02151	UvrB/uvrC motif
AL522_RS10300	PF12344	Ultra-violet resistance protein B
AL522_RS10300	PF04851	Type III restriction enzyme, res subunit
AL522_RS10300	PF00271	Helicase conserved C-terminal domain
AL522_RS10300	PF17757	UvrB interaction domain
AL522_RS10305	PF01933	Uncharacterised protein family UPF0052
AL522_RS10310	PF06463	Molybdenum Cofactor Synthesis C
AL522_RS10310	PF04055	Radical SAM superfamily
AL522_RS10315	PF00994	Probable molybdopterin binding domain
AL522_RS10320	PF01967	MoaC family
AL522_RS10325	PF02597	ThiS family
AL522_RS10330	PF02391	MoaE protein
AL522_RS10340	PF07759	Protein of unknown function (DUF1615)
AL522_RS10345	PF01027	Inhibitor of apoptosis-promoting Bax1
AL522_RS10350	PF03706	Lysylphosphatidylglycerol synthase TM region
AL522_RS10355	PF13091	PLD-like domain
AL522_RS10360	PF03372	Endonuclease/Exonuclease/phosphatase family
AL522_RS10370	PF00270	DEAD/DEAH box helicase
AL522_RS10370	PF00271	Helicase conserved C-terminal domain
AL522_RS10375	PF01207	Dihydrouridine synthase (Dus)
AL522_RS10385	PF01384	Phosphate transporter family
AL522_RS10390	PF17969	L,D-transpeptidase C-terminal domain
AL522_RS10390	PF03734	L,D-transpeptidase catalytic domain
AL522_RS10395	PF00723	Glycosyl hydrolases family 15
AL522_RS10400	PF09335	SNARE associated Golgi protein
AL522_RS10405	PF04893	Yip1 domain
AL522_RS10410	PF00768	D-alanyl-D-alanine carboxypeptidase
AL522_RS10415	PF12794	Mechanosensitive ion channel inner membrane domain 1
AL522_RS10415	PF00924	Mechanosensitive ion channel
AL522_RS10415	PF12795	Mechanosensitive ion channel porin domain
AL522_RS10420	PF03173	Putative carbohydrate binding domain
AL522_RS10420	PF02838	Glycosyl hydrolase family 20, domain 2
AL522_RS10420	PF03174	Chitobiase/beta-hexosaminidase C-terminal domain
AL522_RS10420	PF00728	Glycosyl hydrolase family 20, catalytic domain
AL522_RS10425	PF03573	outer membrane porin, OprD family
AL522_RS10430	PF09330	D-lactate dehydrogenase, membrane binding
AL522_RS10430	PF01565	FAD binding domain 
AL522_RS10435	PF14310	Fibronectin type III-like domain
AL522_RS10435	PF00933	Glycosyl hydrolase family 3 N terminal domain
AL522_RS10435	PF01915	Glycosyl hydrolase family 3 C-terminal domain
AL522_RS10465	PF00293	NUDIX domain
AL522_RS10470	PF00083	Sugar (and other) transporter
AL522_RS10475	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AL522_RS10480	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS10485	PF00005	ABC transporter
AL522_RS10490	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS10495	PF13411	MerR HTH family regulatory protein
AL522_RS10510	PF13307	Helicase C-terminal domain
AL522_RS10510	PF06733	DEAD_2
AL522_RS10515	PF02885	Glycosyl transferase family, helical bundle domain
AL522_RS10520	PF01546	Peptidase family M20/M25/M40
AL522_RS10520	PF07687	Peptidase dimerisation domain
AL522_RS10525	PF17391	Urocanase N-terminal domain
AL522_RS10525	PF01175	Urocanase Rossmann-like domain
AL522_RS10525	PF17392	Urocanase C-terminal domain
AL522_RS10530	PF00221	Aromatic amino acid lyase
AL522_RS10535	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS10535	PF07702	UTRA domain
AL522_RS10540	PF05962	HutD
AL522_RS10545	PF01979	Amidohydrolase family
AL522_RS10550	PF01979	Amidohydrolase family
AL522_RS10560	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL522_RS10565	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS10575	PF00221	Aromatic amino acid lyase
AL522_RS10585	PF05971	RNA methyltransferase
AL522_RS10590	PF00005	ABC transporter
AL522_RS10595	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS10600	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL522_RS10605	PF00210	Ferritin-like domain
AL522_RS10610	PF00892	EamA-like transporter family
AL522_RS10615	PF13505	Outer membrane protein beta-barrel domain
AL522_RS10625	PF01325	Iron dependent repressor, N-terminal DNA binding domain
AL522_RS10625	PF02742	Iron dependent repressor, metal binding and dimerisation domain
AL522_RS10630	PF03600	Citrate transporter
AL522_RS10635	PF00529	HlyD membrane-fusion protein of T1SS
AL522_RS10635	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL522_RS10640	PF07690	Major Facilitator Superfamily
AL522_RS10645	PF02321	Outer membrane efflux protein
AL522_RS10650	PF00816	H-NS histone family
AL522_RS10655	PF00005	ABC transporter
AL522_RS10655	PF12848	ABC transporter
AL522_RS10665	PF00899	ThiF family
AL522_RS10670	PF03453	MoeA N-terminal region (domain I and II)
AL522_RS10670	PF03454	MoeA C-terminal region (domain IV)
AL522_RS10670	PF00994	Probable molybdopterin binding domain
AL522_RS10675	PF01112	Asparaginase
AL522_RS10680	PF00005	ABC transporter
AL522_RS10680	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL522_RS10685	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL522_RS10690	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS10695	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL522_RS10695	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS10710	PF00484	Carbonic anhydrase
AL522_RS10715	PF11769	Protein of unknown function (DUF3313)
AL522_RS10720	PF07995	Glucose / Sorbosone dehydrogenase
AL522_RS10730	PF07943	Penicillin-binding protein 5, C-terminal domain
AL522_RS10730	PF00768	D-alanyl-D-alanine carboxypeptidase
AL522_RS10735	PF01569	PAP2 superfamily
AL522_RS10740	PF06826	Predicted Permease Membrane Region
AL522_RS10740	PF02080	TrkA-C domain
AL522_RS10750	PF00462	Glutaredoxin
AL522_RS10755	PF07214	Protein of unknown function (DUF1418)
AL522_RS10760	PF00881	Nitroreductase family
AL522_RS10765	PF08443	RimK-like ATP-grasp domain
AL522_RS10765	PF18030	RimK PreATP-grasp domain
AL522_RS10770	PF10722	Putative bacterial sensory transduction regulator
AL522_RS10775	PF13416	Bacterial extracellular solute-binding protein
AL522_RS10780	PF00005	ABC transporter
AL522_RS10780	PF08402	TOBE domain
AL522_RS10785	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS10790	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS10795	PF10767	Protein of unknown function (DUF2593)
AL522_RS10800	PF05958	tRNA (Uracil-5-)-methyltransferase
AL522_RS10805	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL522_RS10810	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS10815	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS10820	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL522_RS10825	PF00005	ABC transporter
AL522_RS10830	PF12883	Protein of unknown function (DUF3828)
AL522_RS10835	PF01906	Putative heavy-metal-binding
AL522_RS10840	PF01510	N-acetylmuramoyl-L-alanine amidase
AL522_RS10845	PF01212	Beta-eliminating lyase
AL522_RS10850	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL522_RS10850	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL522_RS10850	PF00205	Thiamine pyrophosphate enzyme, central domain
AL522_RS10855	PF03956	Lysine exporter LysO
AL522_RS10860	PF11398	Protein of unknown function (DUF2813)
AL522_RS10865	PF00313	'Cold-shock' DNA-binding domain
AL522_RS10870	PF02617	ATP-dependent Clp protease adaptor protein ClpS
AL522_RS10875	PF10431	C-terminal, D2-small domain, of ClpB protein 
AL522_RS10875	PF07724	AAA domain (Cdc48 subfamily)
AL522_RS10875	PF17871	AAA lid domain
AL522_RS10875	PF00004	ATPase family associated with various cellular activities (AAA)
AL522_RS10875	PF02861	Clp amino terminal domain, pathogenicity island component
AL522_RS10880	PF01176	Translation initiation factor 1A / IF-1
AL522_RS10885	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
AL522_RS10890	PF00664	ABC transporter transmembrane region
AL522_RS10890	PF00005	ABC transporter
AL522_RS10895	PF00664	ABC transporter transmembrane region
AL522_RS10895	PF00005	ABC transporter
AL522_RS10900	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL522_RS10905	PF01037	Lrp/AsnC ligand binding domain
AL522_RS10910	PF01580	FtsK/SpoIIIE family
AL522_RS10910	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
AL522_RS10910	PF17854	FtsK alpha domain
AL522_RS10910	PF09397	Ftsk gamma domain
AL522_RS10915	PF03548	Outer membrane lipoprotein carrier protein LolA
AL522_RS10920	PF12002	MgsA AAA+ ATPase C terminal
AL522_RS10920	PF16193	AAA C-terminal domain
AL522_RS10920	PF00004	ATPase family associated with various cellular activities (AAA)
AL522_RS10925	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL522_RS10925	PF02403	Seryl-tRNA synthetase N-terminal domain
AL522_RS10930	PF07690	Major Facilitator Superfamily
AL522_RS10935	PF04055	Radical SAM superfamily
AL522_RS10940	PF01228	Glycine radical
AL522_RS10940	PF02901	Pyruvate formate lyase-like
AL522_RS10945	PF01226	Formate/nitrite transporter
AL522_RS10950	PF18381	YcaO cyclodehydratase C-terminal domain
AL522_RS10950	PF02624	YcaO cyclodehydratase, ATP-ad Mg2+-binding
AL522_RS10955	PF00266	Aminotransferase class-V
AL522_RS10960	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AL522_RS10965	PF02224	Cytidylate kinase
AL522_RS10970	PF00575	S1 RNA binding domain
AL522_RS10975	PF00216	Bacterial DNA-binding protein
AL522_RS10980	PF03772	Competence protein
AL522_RS10980	PF00753	Metallo-beta-lactamase superfamily
AL522_RS10985	PF00005	ABC transporter
AL522_RS10985	PF00664	ABC transporter transmembrane region
AL522_RS10990	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
AL522_RS10995	PF06224	Winged helix DNA-binding domain
AL522_RS11000	PF03966	Trm112p-like protein
AL522_RS11005	PF02348	Cytidylyltransferase
AL522_RS11010	PF01636	Phosphotransferase enzyme family
AL522_RS11015	PF02698	DUF218 domain
AL522_RS11020	PF13847	Methyltransferase domain
AL522_RS11025	PF17193	MukF C-terminal domain
AL522_RS11025	PF17192	MukF middle domain
AL522_RS11025	PF03882	MukF winged-helix domain
AL522_RS11030	PF04288	MukE-like family
AL522_RS11035	PF16330	MukB hinge domain
AL522_RS11035	PF04310	MukB N-terminal
AL522_RS11040	PF03734	L,D-transpeptidase catalytic domain
AL522_RS11040	PF01471	Putative peptidoglycan binding domain
AL522_RS11045	PF05951	Bacterial protein of unknown function (DUF882)
AL522_RS11050	PF00753	Metallo-beta-lactamase superfamily
AL522_RS11055	PF00155	Aminotransferase class I and II
AL522_RS11060	PF00267	Gram-negative porin
AL522_RS11065	PF01336	OB-fold nucleic acid binding domain
AL522_RS11065	PF00152	tRNA synthetases class II (D, K and N) 
AL522_RS11070	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
AL522_RS11070	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
AL522_RS11075	PF01433	Peptidase family M1 domain
AL522_RS11075	PF11940	Domain of unknown function (DUF3458) Ig-like fold
AL522_RS11075	PF17432	Domain of unknown function (DUF3458_C) ARM repeats
AL522_RS11080	PF00005	ABC transporter
AL522_RS11085	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS11090	PF00296	Luciferase-like monooxygenase
AL522_RS11095	PF09084	NMT1/THI5 like
AL522_RS11100	PF03358	NADPH-dependent FMN reductase
AL522_RS11105	PF00535	Glycosyl transferase family 2
AL522_RS11115	PF01180	Dihydroorotate dehydrogenase
AL522_RS11120	PF07126	Cell-division protein ZapC
AL522_RS11125	PF03476	MOSC N-terminal beta barrel domain
AL522_RS11125	PF03473	MOSC domain
AL522_RS11125	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL522_RS11130	PF02926	THUMP domain
AL522_RS11130	PF01170	Putative RNA methylase family UPF0020
AL522_RS11130	PF10672	S-adenosylmethionine-dependent methyltransferase
AL522_RS11135	PF12848	ABC transporter
AL522_RS11135	PF16326	ABC transporter C-terminal domain
AL522_RS11135	PF00005	ABC transporter
AL522_RS11140	PF04403	Paraquat-inducible protein A
AL522_RS11145	PF02470	MlaD protein
AL522_RS11150	PF03886	ABC-type transport auxiliary lipoprotein component
AL522_RS11155	PF07977	FabA-like domain
AL522_RS11160	PF13654	AAA domain
AL522_RS11160	PF05362	Lon protease (S16) C-terminal proteolytic domain
AL522_RS11165	PF06303	MatP N-terminal domain
AL522_RS11165	PF17414	MatP C-terminal ribbon-helix-helix domain
AL522_RS11170	PF01389	OmpA-like transmembrane domain
AL522_RS11170	PF00691	OmpA family
AL522_RS11175	PF03846	Cell division inhibitor SulA
AL522_RS11180	PF04994	TfoX C-terminal domain
AL522_RS11180	PF04993	TfoX N-terminal domain
AL522_RS11185	PF12805	FUSC-like inner membrane protein yccS
AL522_RS11190	PF03733	Inner membrane component domain
AL522_RS11195	PF00580	UvrD/REP helicase N-terminal domain
AL522_RS11195	PF13361	UvrD-like helicase C-terminal domain
AL522_RS11195	PF12462	DNA helicase IV / RNA helicase N terminal
AL522_RS11200	PF02142	MGS-like domain
AL522_RS11205	PF09829	Uncharacterized protein conserved in bacteria (DUF2057)
AL522_RS11210	PF13380	CoA binding domain
AL522_RS11215	PF08755	Hemimethylated DNA-binding protein YccV like
AL522_RS11220	PF10672	S-adenosylmethionine-dependent methyltransferase
AL522_RS11220	PF17785	PUA-like domain
AL522_RS11225	PF00708	Acylphosphatase
AL522_RS11230	PF04358	DsrC like protein
AL522_RS11235	PF01027	Inhibitor of apoptosis-promoting Bax1
AL522_RS11250	PF00328	Histidine phosphatase superfamily (branch 2)
AL522_RS11255	PF00171	Aldehyde dehydrogenase family
AL522_RS11260	PF13993	YccJ-like protein
AL522_RS11265	PF03358	NADPH-dependent FMN reductase
AL522_RS11270	PF10685	Stress-induced bacterial acidophilic repeat motif
AL522_RS11280	PF00860	Permease family
AL522_RS11285	PF01613	Flavin reductase like domain
AL522_RS11290	PF00561	alpha/beta hydrolase fold
AL522_RS11295	PF01042	Endoribonuclease L-PSP
AL522_RS11300	PF00857	Isochorismatase family
AL522_RS11305	PF00296	Luciferase-like monooxygenase
AL522_RS11310	PF00440	Bacterial regulatory proteins, tetR family
AL522_RS11310	PF08362	YcdC-like protein, C-terminal region
AL522_RS11320	PF00324	Amino acid permease
AL522_RS11330	PF03472	Autoinducer binding domain
AL522_RS11330	PF00196	Bacterial regulatory proteins, luxR family
AL522_RS11335	PF00765	Autoinducer synthase
AL522_RS11340	PF10769	Protein of unknown function (DUF2594)
AL522_RS11345	PF00196	Bacterial regulatory proteins, luxR family
AL522_RS11345	PF00072	Response regulator receiver domain
AL522_RS11350	PF02151	UvrB/uvrC motif
AL522_RS11350	PF08459	UvrC Helix-hairpin-helix N-terminal
AL522_RS11350	PF01541	GIY-YIG catalytic domain
AL522_RS11355	PF01066	CDP-alcohol phosphatidyltransferase
AL522_RS11395	PF04657	Putative inner membrane exporter, YdcZ 
AL522_RS11400	PF00583	Acetyltransferase (GNAT) family
AL522_RS11405	PF07883	Cupin domain
AL522_RS11405	PF01381	Helix-turn-helix
AL522_RS11435	PF00440	Bacterial regulatory proteins, tetR family
AL522_RS11450	PF00916	Sulfate permease family
AL522_RS11450	PF01740	STAS domain
AL522_RS11460	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL522_RS11460	PF02203	Tar ligand binding domain homologue
AL522_RS11460	PF00672	HAMP domain
AL522_RS11495	PF13533	Biotin-lipoyl like
AL522_RS11500	PF02321	Outer membrane efflux protein
AL522_RS11520	PF00550	Phosphopantetheine attachment site
AL522_RS11525	PF00550	Phosphopantetheine attachment site
AL522_RS11535	PF00501	AMP-binding enzyme
AL522_RS11535	PF13193	AMP-binding enzyme C-terminal domain
AL522_RS11540	PF07977	FabA-like domain
AL522_RS11545	PF00535	Glycosyl transferase family 2
AL522_RS11570	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL522_RS11570	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL522_RS11585	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL522_RS11585	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL522_RS11595	PF13091	PLD-like domain
AL522_RS11600	PF01757	Acyltransferase family
AL522_RS11605	PF04349	Periplasmic glucan biosynthesis protein, MdoG
AL522_RS11610	PF00535	Glycosyl transferase family 2
AL522_RS11615	PF07119	Protein of unknown function (DUF1375)
AL522_RS11620	PF13984	MsyB protein
AL522_RS11630	PF03279	Bacterial lipid A biosynthesis acyltransferase
AL522_RS11635	PF00581	Rhodanese-like domain
AL522_RS11635	PF12368	Rhodanase C-terminal
AL522_RS11635	PF17773	UPF0176 acylphosphatase like domain
AL522_RS11640	PF04264	YceI-like domain
AL522_RS11645	PF01292	Prokaryotic cytochrome b561
AL522_RS11650	PF01266	FAD dependent oxidoreductase
AL522_RS11655	PF13991	BssS protein family
AL522_RS11665	PF06183	DinI-like family
AL522_RS11670	PF01979	Amidohydrolase family
AL522_RS11675	PF07273	Protein of unknown function (DUF1439)
AL522_RS11680	PF13417	Glutathione S-transferase, N-terminal domain
AL522_RS11680	PF04399	Glutaredoxin 2, C terminal domain
AL522_RS11685	PF13302	Acetyltransferase (GNAT) domain
AL522_RS11690	PF04337	Protein of unknown function, DUF480
AL522_RS11695	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL522_RS11700	PF03023	Lipid II flippase MurJ
AL522_RS11705	PF05130	FlgN protein
AL522_RS11710	PF04316	Anti-sigma-28 factor, FlgM
AL522_RS11715	PF13144	Chaperone for flagella basal body P-ring formation
AL522_RS11720	PF00460	Flagella basal body rod protein
AL522_RS11725	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL522_RS11725	PF00460	Flagella basal body rod protein
AL522_RS11730	PF13861	FlgD Tudor-like domain
AL522_RS11730	PF13860	FlgD Ig-like domain
AL522_RS11730	PF03963	Flagellar hook capping protein - N-terminal region
AL522_RS11735	PF00460	Flagella basal body rod protein
AL522_RS11735	PF07559	Flagellar basal body protein FlaE
AL522_RS11735	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL522_RS11740	PF00460	Flagella basal body rod protein
AL522_RS11740	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL522_RS11745	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL522_RS11745	PF00460	Flagella basal body rod protein
AL522_RS11750	PF02107	Flagellar L-ring protein
AL522_RS11755	PF02119	Flagellar P-ring protein
AL522_RS11760	PF10135	Rod binding protein
AL522_RS11760	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AL522_RS11765	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
AL522_RS11765	PF00460	Flagella basal body rod protein
AL522_RS11770	PF00669	Bacterial flagellin N-terminal helical region
AL522_RS11775	PF00575	S1 RNA binding domain
AL522_RS11775	PF12111	Polyribonucleotide phosphorylase C terminal
AL522_RS11775	PF10150	Ribonuclease E/G family
AL522_RS11775	PF00575	S1 RNA binding domain
AL522_RS11775	PF12111	Polyribonucleotide phosphorylase C terminal
AL522_RS11775	PF10150	Ribonuclease E/G family
AL522_RS11780	PF01479	S4 domain
AL522_RS11780	PF00849	RNA pseudouridylate synthase
AL522_RS11785	PF02545	Maf-like protein
AL522_RS11790	PF02620	Large ribosomal RNA subunit accumulation protein YceD
AL522_RS11795	PF01783	Ribosomal L32p protein family
AL522_RS11800	PF02504	Fatty acid synthesis protein
AL522_RS11805	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
AL522_RS11805	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AL522_RS11810	PF00698	Acyl transferase domain
AL522_RS11820	PF00550	Phosphopantetheine attachment site
AL522_RS11825	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL522_RS11825	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL522_RS11830	PF01063	Amino-transferase class IV
AL522_RS11835	PF02618	YceG-like family
AL522_RS11840	PF02223	Thymidylate kinase
AL522_RS11845	PF09115	DNA polymerase III, delta subunit, C terminal
AL522_RS11850	PF01026	TatD related DNase
AL522_RS11855	PF02378	Phosphotransferase system, EIIC 
AL522_RS11855	PF00367	phosphotransferase system, EIIB
AL522_RS11860	PF07470	Glycosyl Hydrolase Family 88
AL522_RS11870	PF01230	HIT domain
AL522_RS11875	PF07233	Protein of unknown function (DUF1425)
AL522_RS11880	PF13036	Peptidoglycan-synthase activator LpoB
AL522_RS11885	PF01636	Phosphotransferase enzyme family
AL522_RS11890	PF00933	Glycosyl hydrolase family 3 N terminal domain
AL522_RS11895	PF05728	Uncharacterised protein family (UPF0227)
AL522_RS11900	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL522_RS11910	PF05433	Glycine zipper 2TM domain
AL522_RS11915	PF02559	CarD-like/TRCF domain
AL522_RS11915	PF17757	UvrB interaction domain
AL522_RS11915	PF00270	DEAD/DEAH box helicase
AL522_RS11915	PF03461	TRCF domain
AL522_RS11915	PF00271	Helicase conserved C-terminal domain
AL522_RS11925	PF02687	FtsX-like permease family
AL522_RS11925	PF12704	MacB-like periplasmic core domain
AL522_RS11930	PF00005	ABC transporter
AL522_RS11935	PF12704	MacB-like periplasmic core domain
AL522_RS11935	PF02687	FtsX-like permease family
AL522_RS11940	PF02146	Sir2 family
AL522_RS11945	PF13416	Bacterial extracellular solute-binding protein
AL522_RS11950	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS11955	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS11960	PF08402	TOBE domain
AL522_RS11960	PF00005	ABC transporter
AL522_RS11965	PF01546	Peptidase family M20/M25/M40
AL522_RS11965	PF07687	Peptidase dimerisation domain
AL522_RS11970	PF08007	Cupin superfamily protein
AL522_RS11975	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS11975	PF08918	PhoQ Sensor
AL522_RS11980	PF00072	Response regulator receiver domain
AL522_RS11980	PF00486	Transcriptional regulatory protein, C terminal
AL522_RS11985	PF00206	Lyase
AL522_RS11985	PF08328	Adenylosuccinate lyase C-terminal
AL522_RS11990	PF04356	Protein of unknown function (DUF489)
AL522_RS12000	PF00293	NUDIX domain
AL522_RS12005	PF00849	RNA pseudouridylate synthase
AL522_RS12010	PF00180	Isocitrate/isopropylmalate dehydrogenase
AL522_RS12050	PF02203	Tar ligand binding domain homologue
AL522_RS12050	PF00672	HAMP domain
AL522_RS12050	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL522_RS12055	PF00440	Bacterial regulatory proteins, tetR family
AL522_RS12080	PF06291	Bor protein
AL522_RS12090	PF13302	Acetyltransferase (GNAT) domain
AL522_RS12120	PF08450	SMP-30/Gluconolactonase/LRE-like region
AL522_RS12140	PF13683	Integrase core domain
AL522_RS12140	PF13276	HTH-like domain
AL522_RS12145	PF01527	Transposase
AL522_RS12150	PF13438	Domain of unknown function (DUF4113)
AL522_RS12150	PF00817	impB/mucB/samB family
AL522_RS12150	PF11799	impB/mucB/samB family C-terminal domain
AL522_RS12175	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
AL522_RS12215	PF00583	Acetyltransferase (GNAT) family
AL522_RS12225	PF02016	LD-carboxypeptidase N-terminal domain
AL522_RS12225	PF17676	LD-carboxypeptidase C-terminal domain
AL522_RS12230	PF01464	Transglycosylase SLT domain
AL522_RS12235	PF04198	Putative sugar-binding domain
AL522_RS12240	PF00456	Transketolase, thiamine diphosphate binding domain
AL522_RS12255	PF00924	Mechanosensitive ion channel
AL522_RS12260	PF07317	Flagellar regulator YcgR
AL522_RS12260	PF07238	PilZ domain
AL522_RS12265	PF04226	Transglycosylase associated protein
AL522_RS12270	PF07715	TonB-dependent Receptor Plug Domain
AL522_RS12270	PF00593	TonB dependent receptor
AL522_RS12275	PF01204	Trehalase
AL522_RS12280	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL522_RS12285	PF02811	PHP domain
AL522_RS12300	PF02613	Nitrate reductase delta subunit
AL522_RS12305	PF02515	CoA-transferase family III
AL522_RS12310	PF00892	EamA-like transporter family
AL522_RS12315	PF00958	GMP synthase C terminal domain
AL522_RS12315	PF00117	Glutamine amidotransferase class-I
AL522_RS12325	PF00171	Aldehyde dehydrogenase family
AL522_RS12340	PF05936	Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 
AL522_RS12345	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
AL522_RS12345	PF00691	OmpA family
AL522_RS12350	PF06761	Intracellular multiplication and human macrophage-killing
AL522_RS12350	PF06744	Type VI secretion protein IcmF C-terminal
AL522_RS12350	PF14331	ImcF-related N-terminal domain
AL522_RS12365	PF05591	Type VI secretion system, VipA, VC_A0107 or Hcp2
AL522_RS12370	PF05943	Type VI secretion protein, EvpB/VC_A0108, tail sheath
AL522_RS12390	PF05638	Type VI secretion system effector, Hcp
AL522_RS12435	PF04965	Gene 25-like lysozyme
AL522_RS12440	PF05947	Type VI secretion system, TssF
AL522_RS12450	PF07724	AAA domain (Cdc48 subfamily)
AL522_RS12450	PF00004	ATPase family associated with various cellular activities (AAA)
AL522_RS12450	PF10431	C-terminal, D2-small domain, of ClpB protein 
AL522_RS12450	PF17871	AAA lid domain
AL522_RS12455	PF00069	Protein kinase domain
AL522_RS12460	PF04717	Type VI secretion system, phage-baseplate injector
AL522_RS12465	PF08786	DcrB
AL522_RS12470	PF05593	RHS Repeat
AL522_RS12470	PF05488	PAAR motif
AL522_RS12490	PF04717	Type VI secretion system, phage-baseplate injector
AL522_RS12510	PF05593	RHS Repeat
AL522_RS12510	PF03527	RHS protein
AL522_RS12535	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AL522_RS12535	PF13378	Enolase C-terminal domain-like
AL522_RS12540	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL522_RS12540	PF00005	ABC transporter
AL522_RS12545	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL522_RS12550	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS12555	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL522_RS12555	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS12560	PF03576	Peptidase family S58 
AL522_RS12575	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS12575	PF03466	LysR substrate binding domain
AL522_RS12580	PF01926	50S ribosome-binding GTPase
AL522_RS12580	PF06071	Protein of unknown function (DUF933)
AL522_RS12585	PF01195	Peptidyl-tRNA hydrolase
AL522_RS12590	PF10762	Protein of unknown function (DUF2583)   
AL522_RS12595	PF17151	Periplasmic sensor domain
AL522_RS12595	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS12600	PF14572	Phosphoribosyl synthetase-associated domain
AL522_RS12600	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
AL522_RS12605	PF08544	GHMP kinases C terminal 
AL522_RS12605	PF00288	GHMP kinases N terminal domain
AL522_RS12610	PF03550	Outer membrane lipoprotein LolB
AL522_RS12615	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
AL522_RS12615	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
AL522_RS12615	PF01488	Shikimate / quinate 5-dehydrogenase
AL522_RS12620	PF03462	PCRF domain
AL522_RS12620	PF00472	RF-1 domain
AL522_RS12625	PF13847	Methyltransferase domain
AL522_RS12625	PF17827	PrmC N-terminal domain
AL522_RS12630	PF04247	Invasion gene expression up-regulator, SirB
AL522_RS12635	PF13369	Transglutaminase-like superfamily
AL522_RS12640	PF00793	DAHP synthetase I family
AL522_RS12645	PF01699	Sodium/calcium exchanger protein
AL522_RS12650	PF06150	ChaB
AL522_RS12655	PF04752	ChaC-like protein
AL522_RS12660	PF00069	Protein kinase domain
AL522_RS12685	PF14331	ImcF-related N-terminal domain
AL522_RS12685	PF06744	Type VI secretion protein IcmF C-terminal
AL522_RS12685	PF06761	Intracellular multiplication and human macrophage-killing
AL522_RS12700	PF03861	ANTAR domain
AL522_RS12700	PF08376	Nitrate and nitrite sensing
AL522_RS12710	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS12715	PF00005	ABC transporter
AL522_RS12720	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL522_RS12720	PF04324	BFD-like [2Fe-2S] binding domain
AL522_RS12720	PF18267	Rubredoxin NAD+ reductase C-terminal domain
AL522_RS12720	PF13806	Rieske-like [2Fe-2S] domain
AL522_RS12720	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL522_RS12720	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL522_RS12725	PF04324	BFD-like [2Fe-2S] binding domain
AL522_RS12725	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL522_RS12725	PF01568	Molydopterin dinucleotide binding domain
AL522_RS12725	PF00384	Molybdopterin oxidoreductase
AL522_RS12730	PF10414	Sirohaem synthase dimerisation region
AL522_RS12730	PF14824	Sirohaem biosynthesis protein central
AL522_RS12730	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL522_RS12735	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
AL522_RS12740	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
AL522_RS12745	PF00455	DeoR C terminal sensor domain
AL522_RS12745	PF08220	DeoR-like helix-turn-helix domain
AL522_RS12755	PF13407	Periplasmic binding protein domain
AL522_RS12765	PF00005	ABC transporter
AL522_RS12770	PF02653	Branched-chain amino acid transport system / permease component
AL522_RS12780	PF11924	Inverse autotransporter, beta-domain
AL522_RS12785	PF08447	PAS fold
AL522_RS12785	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL522_RS12785	PF13426	PAS domain
AL522_RS12795	PF01047	MarR family
AL522_RS12810	PF00563	EAL domain
AL522_RS12810	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS12810	PF08447	PAS fold
AL522_RS12810	PF08448	PAS fold
AL522_RS12815	PF00267	Gram-negative porin
AL522_RS12825	PF04958	Arginine N-succinyltransferase beta subunit
AL522_RS12830	PF00171	Aldehyde dehydrogenase family
AL522_RS12835	PF04996	Succinylarginine dihydrolase
AL522_RS12840	PF04952	Succinylglutamate desuccinylase / Aspartoacylase family
AL522_RS12845	PF07813	LTXXQ motif family protein
AL522_RS12855	PF00892	EamA-like transporter family
AL522_RS12860	PF02540	NAD synthase
AL522_RS12865	PF07690	Major Facilitator Superfamily
AL522_RS12875	PF04355	SmpA / OmlA family
AL522_RS12885	PF00375	Sodium:dicarboxylate symporter family
AL522_RS12890	PF04307	LexA-binding, inner membrane-associated putative hydrolase
AL522_RS12900	PF04962	KduI/IolB family
AL522_RS12905	PF13419	Haloacid dehalogenase-like hydrolase
AL522_RS12910	PF14002	YniB-like protein
AL522_RS12915	PF03881	Fructosamine kinase
AL522_RS12920	PF11080	Endoribonuclease GhoS 
AL522_RS12925	PF04338	Protein of unknown function, DUF481
AL522_RS12930	PF03129	Anticodon binding domain
AL522_RS12930	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AL522_RS12930	PF02824	TGS domain
AL522_RS12930	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AL522_RS12935	PF05198	Translation initiation factor IF-3, N-terminal domain
AL522_RS12935	PF00707	Translation initiation factor IF-3, C-terminal domain
AL522_RS12940	PF01632	Ribosomal protein L35
AL522_RS12945	PF00453	Ribosomal protein L20
AL522_RS12950	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
AL522_RS12950	PF01409	tRNA synthetases class II core domain (F)
AL522_RS12955	PF03147	Ferredoxin-fold anticodon binding domain
AL522_RS12955	PF01588	Putative tRNA binding domain
AL522_RS12955	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
AL522_RS12955	PF03483	B3/4 domain
AL522_RS12955	PF03484	tRNA synthetase B5 domain
AL522_RS12960	PF00216	Bacterial DNA-binding protein
AL522_RS12965	PF01032	FecCD transport family
AL522_RS12970	PF00255	Glutathione peroxidase
AL522_RS12975	PF00005	ABC transporter
AL522_RS12980	PF00877	NlpC/P60 family
AL522_RS12990	PF02696	Uncharacterized ACR, YdiU/UPF0061 family
AL522_RS12995	PF00793	DAHP synthetase I family
AL522_RS13000	PF03618	Kinase/pyrophosphorylase
AL522_RS13005	PF02896	PEP-utilising enzyme, TIM barrel domain
AL522_RS13005	PF00391	PEP-utilising enzyme, mobile domain
AL522_RS13005	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
AL522_RS13015	PF01594	AI-2E family transporter
AL522_RS13020	PF01565	FAD binding domain 
AL522_RS13020	PF02913	FAD linked oxidases, C-terminal domain
AL522_RS13020	PF13183	4Fe-4S dicluster domain
AL522_RS13030	PF01521	Iron-sulphur cluster biosynthesis
AL522_RS13035	PF01458	Uncharacterized protein family (UPF0051)
AL522_RS13040	PF00005	ABC transporter
AL522_RS13045	PF01458	Uncharacterized protein family (UPF0051)
AL522_RS13050	PF00266	Aminotransferase class-V
AL522_RS13055	PF02657	Fe-S metabolism associated domain
AL522_RS13060	PF01476	LysM domain
AL522_RS13060	PF03734	L,D-transpeptidase catalytic domain
AL522_RS13060	PF17969	L,D-transpeptidase C-terminal domain
AL522_RS13065	PF04728	Lipoprotein leucine-zipper
AL522_RS13070	PF02887	Pyruvate kinase, alpha/beta domain
AL522_RS13070	PF00224	Pyruvate kinase, barrel domain
AL522_RS13090	PF01554	MatE
AL522_RS13095	PF00677	Lumazine binding domain
AL522_RS13105	PF07690	Major Facilitator Superfamily
AL522_RS13110	PF03466	LysR substrate binding domain
AL522_RS13110	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS13115	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS13120	PF00877	NlpC/P60 family
AL522_RS13125	PF00462	Glutaredoxin
AL522_RS13130	PF00929	Exonuclease
AL522_RS13135	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AL522_RS13140	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL522_RS13145	PF16925	Tetracyclin repressor-like, C-terminal domain
AL522_RS13145	PF00440	Bacterial regulatory proteins, tetR family
AL522_RS13150	PF06945	Protein of unknown function (DUF1289)
AL522_RS13155	PF00248	Aldo/keto reductase family
AL522_RS13160	PF00080	Copper/zinc superoxide dismutase (SODC)
AL522_RS13170	PF04632	Fusaric acid resistance protein family
AL522_RS13175	PF00529	HlyD membrane-fusion protein of T1SS
AL522_RS13175	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL522_RS13180	PF07869	Protein of unknown function (DUF1656)
AL522_RS13185	PF01047	MarR family
AL522_RS13190	PF05433	Glycine zipper 2TM domain
AL522_RS13195	PF03702	Anhydro-N-acetylmuramic acid kinase
AL522_RS13205	PF04940	Sensors of blue-light using FAD
AL522_RS13205	PF00563	EAL domain
AL522_RS13225	PF00440	Bacterial regulatory proteins, tetR family
AL522_RS13240	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL522_RS13240	PF00128	Alpha amylase, catalytic domain
AL522_RS13245	PF00128	Alpha amylase, catalytic domain
AL522_RS13250	PF00128	Alpha amylase, catalytic domain
AL522_RS13250	PF11941	Domain of unknown function (DUF3459)
AL522_RS13260	PF00924	Mechanosensitive ion channel
AL522_RS13265	PF02203	Tar ligand binding domain homologue
AL522_RS13265	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL522_RS13265	PF00672	HAMP domain
AL522_RS13270	PF18011	C-terminal domain found in long catalases
AL522_RS13270	PF06628	Catalase-related immune-responsive
AL522_RS13270	PF00199	Catalase
AL522_RS13275	PF09223	ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
AL522_RS13280	PF04237	YjbR
AL522_RS13285	PF03851	UV-endonuclease UvdE
AL522_RS13295	PF05067	Manganese containing catalase
AL522_RS13300	PF10798	Biofilm development protein YmgB/AriR
AL522_RS13315	PF00717	Peptidase S24-like
AL522_RS13320	PF13438	Domain of unknown function (DUF4113)
AL522_RS13320	PF00817	impB/mucB/samB family
AL522_RS13320	PF11799	impB/mucB/samB family C-terminal domain
AL522_RS13340	PF10798	Biofilm development protein YmgB/AriR
AL522_RS13350	PF06004	Bacterial protein of unknown function (DUF903)
AL522_RS13355	PF06004	Bacterial protein of unknown function (DUF903)
AL522_RS13365	PF09864	Membrane-bound lysozyme-inhibitor of c-type lysozyme
AL522_RS13370	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
AL522_RS13370	PF01243	Pyridoxamine 5'-phosphate oxidase
AL522_RS13375	PF01479	S4 domain
AL522_RS13375	PF00579	tRNA synthetases class I (W and Y)
AL522_RS13380	PF08543	Phosphomethylpyrimidine kinase
AL522_RS13385	PF00043	Glutathione S-transferase, C-terminal domain
AL522_RS13385	PF02798	Glutathione S-transferase, N-terminal domain
AL522_RS13390	PF00854	POT family
AL522_RS13395	PF00117	Glutamine amidotransferase class-I
AL522_RS13395	PF06418	CTP synthase N-terminus
AL522_RS13400	PF13378	Enolase C-terminal domain-like
AL522_RS13400	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AL522_RS13405	PF07690	Major Facilitator Superfamily
AL522_RS13415	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL522_RS13415	PF10576	Iron-sulfur binding domain of endonuclease III
AL522_RS13415	PF00633	Helix-hairpin-helix motif
AL522_RS13420	PF02508	Rnf-Nqr subunit, membrane protein
AL522_RS13425	PF04205	FMN-binding domain
AL522_RS13430	PF03116	NQR2, RnfD, RnfE family
AL522_RS13435	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
AL522_RS13435	PF13375	RnfC Barrel sandwich hybrid domain
AL522_RS13435	PF12838	4Fe-4S dicluster domain
AL522_RS13435	PF10531	SLBB domain
AL522_RS13440	PF04060	Putative Fe-S cluster
AL522_RS13445	PF02508	Rnf-Nqr subunit, membrane protein
AL522_RS13450	PF10754	Protein of unknown function (DUF2569)
AL522_RS13455	PF05321	Haemolysin expression modulating protein
AL522_RS13465	PF13407	Periplasmic binding protein domain
AL522_RS13470	PF00005	ABC transporter
AL522_RS13475	PF02653	Branched-chain amino acid transport system / permease component
AL522_RS13480	PF02653	Branched-chain amino acid transport system / permease component
AL522_RS13490	PF11762	L-arabinose isomerase C-terminal domain
AL522_RS13490	PF02610	L-arabinose isomerase
AL522_RS13495	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AL522_RS13500	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL522_RS13505	PF00005	ABC transporter
AL522_RS13510	PF02653	Branched-chain amino acid transport system / permease component
AL522_RS13515	PF02311	AraC-like ligand binding domain
AL522_RS13515	PF12833	Helix-turn-helix domain
AL522_RS13520	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AL522_RS13520	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL522_RS13525	PF00962	Adenosine/AMP deaminase
AL522_RS13530	PF00155	Aminotransferase class I and II
AL522_RS13535	PF02378	Phosphotransferase system, EIIC 
AL522_RS13535	PF00367	phosphotransferase system, EIIB
AL522_RS13540	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL522_RS13540	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS13545	PF06097	Bacterial protein of unknown function (DUF945)
AL522_RS13550	PF01238	Phosphomannose isomerase type I
AL522_RS13555	PF10415	Fumarase C C-terminus
AL522_RS13555	PF00206	Lyase
AL522_RS13560	PF05472	DNA replication terminus site-binding protein (Ter protein)
AL522_RS13590	PF00873	AcrB/AcrD/AcrF family
AL522_RS13595	PF13533	Biotin-lipoyl like
AL522_RS13600	PF12833	Helix-turn-helix domain
AL522_RS13605	PF00545	ribonuclease
AL522_RS13630	PF03594	Benzoate membrane transport protein
AL522_RS13635	PF07883	Cupin domain
AL522_RS13635	PF01381	Helix-turn-helix
AL522_RS13645	PF00857	Isochorismatase family
AL522_RS13650	PF07715	TonB-dependent Receptor Plug Domain
AL522_RS13650	PF00593	TonB dependent receptor
AL522_RS13655	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL522_RS13655	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL522_RS13660	PF12833	Helix-turn-helix domain
AL522_RS13660	PF12852	Cupin
AL522_RS13665	PF00682	HMGL-like
AL522_RS13665	PF08502	LeuA allosteric (dimerisation) domain
AL522_RS13670	PF01244	Membrane dipeptidase (Peptidase family M19)
AL522_RS13675	PF12706	Beta-lactamase superfamily domain
AL522_RS13680	PF03070	TENA/THI-4/PQQC family
AL522_RS13685	PF05402	Coenzyme PQQ synthesis protein D (PqqD)
AL522_RS13690	PF13186	Iron-sulfur cluster-binding domain
AL522_RS13690	PF04055	Radical SAM superfamily
AL522_RS13695	PF00675	Insulinase (Peptidase family M16)
AL522_RS13700	PF04264	YceI-like domain
AL522_RS13705	PF00291	Pyridoxal-phosphate dependent enzyme
AL522_RS13710	PF00365	Phosphofructokinase
AL522_RS13720	PF03611	PTS system sugar-specific permease component
AL522_RS13725	PF01116	Fructose-bisphosphate aldolase class-II
AL522_RS13745	PF04134	Protein of unknown function, DUF393
AL522_RS13750	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS13750	PF03466	LysR substrate binding domain
AL522_RS13760	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS13760	PF03466	LysR substrate binding domain
AL522_RS13775	PF02659	Putative manganese efflux pump
AL522_RS13840	PF00005	ABC transporter
AL522_RS13840	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL522_RS13845	PF00005	ABC transporter
AL522_RS13845	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL522_RS13850	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS13850	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL522_RS13855	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS13860	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL522_RS13865	PF13378	Enolase C-terminal domain-like
AL522_RS13865	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AL522_RS13880	PF07995	Glucose / Sorbosone dehydrogenase
AL522_RS13890	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
AL522_RS13895	PF07690	Major Facilitator Superfamily
AL522_RS13905	PF01011	PQQ enzyme repeat
AL522_RS13910	PF00107	Zinc-binding dehydrogenase
AL522_RS13910	PF16884	N-terminal domain of oxidoreductase
AL522_RS13925	PF08220	DeoR-like helix-turn-helix domain
AL522_RS13925	PF00455	DeoR C terminal sensor domain
AL522_RS13930	PF00293	NUDIX domain
AL522_RS13935	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL522_RS13945	PF00576	HIUase/Transthyretin family
AL522_RS13955	PF01661	Macro domain
AL522_RS13975	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AL522_RS13975	PF02753	Pili assembly chaperone PapD, C-terminal domain
AL522_RS13980	PF00577	Outer membrane usher protein
AL522_RS13980	PF13954	PapC N-terminal domain
AL522_RS13980	PF13953	PapC C-terminal domain
AL522_RS13990	PF02753	Pili assembly chaperone PapD, C-terminal domain
AL522_RS13990	PF00345	Pili and flagellar-assembly chaperone, PapD N-terminal domain
AL522_RS14015	PF07804	HipA-like C-terminal domain
AL522_RS14015	PF13657	HipA N-terminal domain
AL522_RS14020	PF01381	Helix-turn-helix
AL522_RS14030	PF00459	Inositol monophosphatase family
AL522_RS14035	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS14045	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS14055	PF00723	Glycosyl hydrolases family 15
AL522_RS14060	PF08808	RES domain
AL522_RS14065	PF09722	Protein of unknown function (DUF2384)
AL522_RS14070	PF00144	Beta-lactamase
AL522_RS14085	PF01494	FAD binding domain
AL522_RS14090	PF01432	Peptidase family M3
AL522_RS14100	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AL522_RS14100	PF01799	[2Fe-2S] binding domain
AL522_RS14100	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
AL522_RS14105	PF01799	[2Fe-2S] binding domain
AL522_RS14105	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL522_RS14110	PF01979	Amidohydrolase family
AL522_RS14115	PF00106	short chain dehydrogenase
AL522_RS14120	PF02694	Uncharacterised BCR, YnfA/UPF0060 family
AL522_RS14125	PF06932	Protein of unknown function (DUF1283)
AL522_RS14130	PF06649	Protein of unknown function (DUF1161)
AL522_RS14135	PF07690	Major Facilitator Superfamily
AL522_RS14140	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS14145	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AL522_RS14150	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS14155	PF00571	CBS domain
AL522_RS14155	PF00005	ABC transporter
AL522_RS14160	PF00860	Permease family
AL522_RS14170	PF00480	ROK family
AL522_RS14175	PF03466	LysR substrate binding domain
AL522_RS14175	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS14180	PF07690	Major Facilitator Superfamily
AL522_RS14190	PF01292	Prokaryotic cytochrome b561
AL522_RS14195	PF07690	Major Facilitator Superfamily
AL522_RS14200	PF07338	Protein of unknown function (DUF1471)
AL522_RS14205	PF07338	Protein of unknown function (DUF1471)
AL522_RS14210	PF00440	Bacterial regulatory proteins, tetR family
AL522_RS14215	PF05336	L-rhamnose mutarotase
AL522_RS14220	PF00596	Class II Aldolase and Adducin N-terminal domain
AL522_RS14225	PF06134	L-rhamnose isomerase (RhaA)
AL522_RS14230	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
AL522_RS14230	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
AL522_RS14235	PF02311	AraC-like ligand binding domain
AL522_RS14235	PF12833	Helix-turn-helix domain
AL522_RS14240	PF12833	Helix-turn-helix domain
AL522_RS14240	PF02311	AraC-like ligand binding domain
AL522_RS14245	PF06379	L-rhamnose-proton symport protein (RhaT)
AL522_RS14255	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AL522_RS14260	PF00171	Aldehyde dehydrogenase family
AL522_RS14265	PF07690	Major Facilitator Superfamily
AL522_RS14270	PF07687	Peptidase dimerisation domain
AL522_RS14270	PF01546	Peptidase family M20/M25/M40
AL522_RS14275	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS14275	PF03466	LysR substrate binding domain
AL522_RS14280	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL522_RS14285	PF07687	Peptidase dimerisation domain
AL522_RS14285	PF01546	Peptidase family M20/M25/M40
AL522_RS14290	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL522_RS14295	PF00155	Aminotransferase class I and II
AL522_RS14300	PF03466	LysR substrate binding domain
AL522_RS14300	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS14305	PF00672	HAMP domain
AL522_RS14305	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL522_RS14305	PF02203	Tar ligand binding domain homologue
AL522_RS14310	PF00135	Carboxylesterase family
AL522_RS14315	PF07063	Domain of unknown function (DUF1338)
AL522_RS14320	PF07690	Major Facilitator Superfamily
AL522_RS14325	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS14325	PF03466	LysR substrate binding domain
AL522_RS14330	PF01713	Smr domain
AL522_RS14335	PF00325	Bacterial regulatory proteins, crp family
AL522_RS14335	PF00027	Cyclic nucleotide-binding domain
AL522_RS14340	PF00582	Universal stress protein family
AL522_RS14345	PF02233	NAD(P) transhydrogenase beta subunit
AL522_RS14350	PF12769	4TM region of pyridine nucleotide transhydrogenase, mitoch
AL522_RS14350	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
AL522_RS14350	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
AL522_RS14355	PF07338	Protein of unknown function (DUF1471)
AL522_RS14360	PF13520	Amino acid permease
AL522_RS14370	PF00486	Transcriptional regulatory protein, C terminal
AL522_RS14370	PF00072	Response regulator receiver domain
AL522_RS14375	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS14375	PF00672	HAMP domain
AL522_RS14375	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS14380	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
AL522_RS14390	PF00089	Trypsin
AL522_RS14395	PF04408	Helicase associated domain (HA2)
AL522_RS14395	PF00270	DEAD/DEAH box helicase
AL522_RS14395	PF00271	Helicase conserved C-terminal domain
AL522_RS14395	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
AL522_RS14395	PF11898	Domain of unknown function (DUF3418)
AL522_RS14400	PF02525	Flavodoxin-like fold
AL522_RS14410	PF13617	YnbE-like lipoprotein
AL522_RS14415	PF11739	Dicarboxylate transport
AL522_RS14420	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL522_RS14420	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL522_RS14430	PF02308	MgtC family
AL522_RS14440	PF01171	PP-loop family
AL522_RS14445	PF01544	CorA-like Mg2+ transporter protein
AL522_RS14450	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL522_RS14455	PF00246	Zinc carboxypeptidase
AL522_RS14460	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AL522_RS14460	PF13378	Enolase C-terminal domain-like
AL522_RS14465	PF08534	Redoxin
AL522_RS14470	PF00158	Sigma-54 interaction domain
AL522_RS14470	PF18024	Helix-turn-helix domain
AL522_RS14475	PF04138	GtrA-like protein
AL522_RS14480	PF00535	Glycosyl transferase family 2
AL522_RS14490	PF05128	Domain of unknown function (DUF697) 
AL522_RS14500	PF09584	Phage shock protein PspD (Phageshock_PspD)
AL522_RS14505	PF04024	PspC domain
AL522_RS14510	PF06667	Phage shock protein B
AL522_RS14515	PF04012	PspA/IM30 family
AL522_RS14520	PF00158	Sigma-54 interaction domain
AL522_RS14520	PF02954	Bacterial regulatory protein, Fis family
AL522_RS14530	PF05977	Transmembrane secretion effector
AL522_RS14535	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL522_RS14540	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS14550	PF10685	Stress-induced bacterial acidophilic repeat motif
AL522_RS14560	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS14560	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL522_RS14565	PF00005	ABC transporter
AL522_RS14565	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL522_RS14570	PF00005	ABC transporter
AL522_RS14585	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS14585	PF03466	LysR substrate binding domain
AL522_RS14595	PF02203	Tar ligand binding domain homologue
AL522_RS14595	PF00672	HAMP domain
AL522_RS14595	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL522_RS14600	PF00367	phosphotransferase system, EIIB
AL522_RS14600	PF02378	Phosphotransferase system, EIIC 
AL522_RS14605	PF00384	Molybdopterin oxidoreductase
AL522_RS14610	PF17876	Cold shock domain
AL522_RS14610	PF08206	Ribonuclease B OB domain
AL522_RS14610	PF00773	RNB domain
AL522_RS14610	PF00575	S1 RNA binding domain
AL522_RS14615	PF13722	5TM C-terminal transporter carbon starvation CstA
AL522_RS14615	PF02554	Carbon starvation protein CstA
AL522_RS14620	PF04328	Selenoprotein, putative 
AL522_RS14625	PF13426	PAS domain
AL522_RS14625	PF00563	EAL domain
AL522_RS14625	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS14630	PF00378	Enoyl-CoA hydratase/isomerase
AL522_RS14640	PF00596	Class II Aldolase and Adducin N-terminal domain
AL522_RS14650	PF05433	Glycine zipper 2TM domain
AL522_RS14655	PF01253	Translation initiation factor SUI1
AL522_RS14660	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL522_RS14665	PF18073	Rubredoxin metal binding domain
AL522_RS14670	PF06305	Lipopolysaccharide assembly protein A domain
AL522_RS14675	PF01569	PAP2 superfamily
AL522_RS14680	PF00925	GTP cyclohydrolase II
AL522_RS14685	PF00330	Aconitase family (aconitate hydratase)
AL522_RS14685	PF00694	Aconitase C-terminal domain
AL522_RS14690	PF03466	LysR substrate binding domain
AL522_RS14690	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS14695	PF01396	Topoisomerase DNA binding C4 zinc finger
AL522_RS14695	PF01751	Toprim domain
AL522_RS14695	PF08272	Topoisomerase I zinc-ribbon-like 
AL522_RS14695	PF01131	DNA topoisomerase
AL522_RS14700	PF10692	Protein of unknown function (DUF2498)
AL522_RS14705	PF08496	Peptidase family S49 N-terminal
AL522_RS14705	PF01343	Peptidase family S49
AL522_RS14710	PF00106	short chain dehydrogenase
AL522_RS14715	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
AL522_RS14720	PF00849	RNA pseudouridylate synthase
AL522_RS14720	PF01479	S4 domain
AL522_RS14730	PF01300	Telomere recombination
AL522_RS14735	PF02811	PHP domain
AL522_RS14740	PF04715	Anthranilate synthase component I, N terminal region
AL522_RS14740	PF00425	chorismate binding enzyme
AL522_RS14745	PF00591	Glycosyl transferase family, a/b domain
AL522_RS14745	PF00117	Glutamine amidotransferase class-I
AL522_RS14745	PF02885	Glycosyl transferase family, helical bundle domain
AL522_RS14750	PF00591	Glycosyl transferase family, a/b domain
AL522_RS14750	PF02885	Glycosyl transferase family, helical bundle domain
AL522_RS14755	PF00218	Indole-3-glycerol phosphate synthase
AL522_RS14755	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
AL522_RS14760	PF00291	Pyridoxal-phosphate dependent enzyme
AL522_RS14765	PF00290	Tryptophan synthase alpha chain
AL522_RS14775	PF03922	OmpW family
AL522_RS14780	PF03692	Putative zinc- or iron-chelating domain
AL522_RS14790	PF04279	Intracellular septation protein A 
AL522_RS14795	PF03061	Thioesterase superfamily
AL522_RS14800	PF03544	Gram-negative bacterial TonB protein C-terminal
AL522_RS14805	PF03795	YCII-related domain
AL522_RS14825	PF13396	Phospholipase_D-nuclease N-terminal
AL522_RS14825	PF13091	PLD-like domain
AL522_RS14830	PF04269	Protein of unknown function, DUF440
AL522_RS14835	PF00005	ABC transporter
AL522_RS14835	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL522_RS14840	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL522_RS14840	PF00005	ABC transporter
AL522_RS14845	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS14845	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL522_RS14850	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS14855	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL522_RS14860	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL522_RS14865	PF01914	MarC family integral membrane protein
AL522_RS14870	PF00465	Iron-containing alcohol dehydrogenase 
AL522_RS14870	PF00171	Aldehyde dehydrogenase family
AL522_RS14875	PF00265	Thymidine kinase
AL522_RS14880	PF00816	H-NS histone family
AL522_RS14885	PF01370	NAD dependent epimerase/dehydratase family
AL522_RS14890	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
AL522_RS14890	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
AL522_RS14890	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AL522_RS14895	PF00483	Nucleotidyl transferase
AL522_RS14900	PF00072	Response regulator receiver domain
AL522_RS14905	PF01734	Patatin-like phospholipase
AL522_RS14915	PF01842	ACT domain
AL522_RS14915	PF00551	Formyl transferase
AL522_RS14940	PF03372	Endonuclease/Exonuclease/phosphatase family
AL522_RS14945	PF07383	Protein of unknown function (DUF1496)
AL522_RS14950	PF01751	Toprim domain
AL522_RS14950	PF01131	DNA topoisomerase
AL522_RS14955	PF00881	Nitroreductase family
AL522_RS14960	PF01343	Peptidase family S49
AL522_RS14965	PF00710	Asparaginase, N-terminal
AL522_RS14965	PF17763	Glutaminase/Asparaginase C-terminal domain
AL522_RS14970	PF00857	Isochorismatase family
AL522_RS14975	PF07023	Protein of unknown function (DUF1315)
AL522_RS14980	PF01641	SelR domain
AL522_RS14985	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL522_RS14985	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL522_RS14990	PF01263	Aldose 1-epimerase
AL522_RS14995	PF00248	Aldo/keto reductase family
AL522_RS15000	PF06629	MltA-interacting protein MipA
AL522_RS15005	PF06798	PrkA serine protein kinase C-terminal domain
AL522_RS15005	PF08298	PrkA AAA domain
AL522_RS15010	PF04285	Protein of unknown function (DUF444)
AL522_RS15015	PF02080	TrkA-C domain
AL522_RS15015	PF00999	Sodium/hydrogen exchanger family
AL522_RS15015	PF03471	Transporter associated domain
AL522_RS15025	PF02397	Bacterial sugar transferase
AL522_RS15030	PF07690	Major Facilitator Superfamily
AL522_RS15035	PF01168	Alanine racemase, N-terminal domain
AL522_RS15035	PF00842	Alanine racemase, C-terminal domain
AL522_RS15040	PF01266	FAD dependent oxidoreductase
AL522_RS15045	PF04293	SpoVR like protein
AL522_RS15050	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS15050	PF07840	FadR C-terminal domain
AL522_RS15055	PF02600	Disulfide bond formation protein DsbB
AL522_RS15060	PF03692	Putative zinc- or iron-chelating domain
AL522_RS15065	PF01557	Fumarylacetoacetate (FAA) hydrolase family
AL522_RS15070	PF05166	YcgL domain
AL522_RS15075	PF03775	Septum formation inhibitor MinC, C-terminal domain
AL522_RS15075	PF05209	Septum formation inhibitor MinC, N-terminal domain
AL522_RS15080	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
AL522_RS15085	PF03776	Septum formation topological specificity factor MinE
AL522_RS15090	PF00570	HRDC domain
AL522_RS15090	PF01612	3'-5' exonuclease
AL522_RS15095	PF00501	AMP-binding enzyme
AL522_RS15095	PF13193	AMP-binding enzyme C-terminal domain
AL522_RS15100	PF03843	Outer membrane lipoprotein Slp family
AL522_RS15105	PF00814	Glycoprotease family
AL522_RS15110	PF04851	Type III restriction enzyme, res subunit
AL522_RS15110	PF13307	Helicase C-terminal domain
AL522_RS15115	PF00194	Eukaryotic-type carbonic anhydrase
AL522_RS15125	PF01042	Endoribonuclease L-PSP
AL522_RS15130	PF03701	Uncharacterised protein family (UPF0181)
AL522_RS15135	PF00425	chorismate binding enzyme
AL522_RS15135	PF04715	Anthranilate synthase component I, N terminal region
AL522_RS15140	PF00293	NUDIX domain
AL522_RS15145	PF03315	Serine dehydratase beta chain
AL522_RS15145	PF03313	Serine dehydratase alpha chain
AL522_RS15150	PF00563	EAL domain
AL522_RS15150	PF12792	CSS motif domain associated with EAL 
AL522_RS15155	PF03741	Integral membrane protein TerC family
AL522_RS15155	PF03471	Transporter associated domain
AL522_RS15160	PF03610	PTS system fructose IIA component
AL522_RS15160	PF03830	PTS system sorbose subfamily IIB component
AL522_RS15165	PF03609	PTS system sorbose-specific iic component
AL522_RS15170	PF03613	PTS system mannose/fructose/sorbose family IID component
AL522_RS15175	PF06173	Protein of unknown function (DUF986)
AL522_RS15180	PF13847	Methyltransferase domain
AL522_RS15185	PF00313	'Cold-shock' DNA-binding domain
AL522_RS15190	PF12706	Beta-lactamase superfamily domain
AL522_RS15195	PF13974	YebO-like protein
AL522_RS15200	PF13996	YobH-like protein
AL522_RS15205	PF09339	IclR helix-turn-helix domain
AL522_RS15205	PF01614	Bacterial transcriptional regulator
AL522_RS15210	PF07690	Major Facilitator Superfamily
AL522_RS15215	PF01435	Peptidase family M48
AL522_RS15220	PF17804	Tail specific protease N-terminal domain
AL522_RS15220	PF03572	Peptidase family S41
AL522_RS15220	PF00595	PDZ domain
AL522_RS15220	PF11818	C-terminal domain of tail specific protease (DUF3340)
AL522_RS15225	PF04352	ProQ/FINO family
AL522_RS15225	PF17516	ProQ C-terminal domain
AL522_RS15230	PF13185	GAF domain
AL522_RS15235	PF04403	Paraquat-inducible protein A
AL522_RS15240	PF02470	MlaD protein
AL522_RS15245	PF01189	16S rRNA methyltransferase RsmB/F
AL522_RS15245	PF17125	N-terminal domain of 16S rRNA methyltransferase RsmF
AL522_RS15245	PF13636	RNA-binding PUA-like domain of methyltransferase RsmF
AL522_RS15250	PF00149	Calcineurin-like phosphoesterase
AL522_RS15255	PF06906	Protein of unknown function (DUF1272)
AL522_RS15260	PF07690	Major Facilitator Superfamily
AL522_RS15265	PF02028	BCCT, betaine/carnitine/choline family transporter
AL522_RS15270	PF13977	BetI-type transcriptional repressor, C-terminal
AL522_RS15270	PF00440	Bacterial regulatory proteins, tetR family
AL522_RS15275	PF00171	Aldehyde dehydrogenase family
AL522_RS15280	PF00732	GMC oxidoreductase
AL522_RS15280	PF05199	GMC oxidoreductase
AL522_RS15285	PF00893	Small Multidrug Resistance protein
AL522_RS15290	PF00893	Small Multidrug Resistance protein
AL522_RS15295	PF01757	Acyltransferase family
AL522_RS15310	PF00107	Zinc-binding dehydrogenase
AL522_RS15310	PF08240	Alcohol dehydrogenase GroES-like domain
AL522_RS15325	PF07484	Phage Tail Collar Domain
AL522_RS15355	PF00589	Phage integrase family
AL522_RS15355	PF02899	Phage integrase, N-terminal SAM-like domain
AL522_RS15360	PF10709	Protein of unknown function (DUF2511)
AL522_RS15365	PF05425	Copper resistance protein D
AL522_RS15370	PF04234	CopC domain
AL522_RS15375	PF06440	DNA polymerase III, theta subunit
AL522_RS15380	PF00929	Exonuclease
AL522_RS15385	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
AL522_RS15385	PF00326	Prolyl oligopeptidase family
AL522_RS15390	PF04391	Protein of unknown function (DUF533)
AL522_RS15395	PF02222	ATP-grasp domain
AL522_RS15400	PF01081	KDPG and KHG aldolase
AL522_RS15405	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
AL522_RS15405	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
AL522_RS15410	PF01380	SIS domain
AL522_RS15410	PF01418	Helix-turn-helix domain, rpiR family
AL522_RS15415	PF00224	Pyruvate kinase, barrel domain
AL522_RS15415	PF02887	Pyruvate kinase, alpha/beta domain
AL522_RS15420	PF07690	Major Facilitator Superfamily
AL522_RS15425	PF03279	Bacterial lipid A biosynthesis acyltransferase
AL522_RS15430	PF08525	Opacity-associated protein A N-terminal motif
AL522_RS15430	PF01551	Peptidase family M23
AL522_RS15430	PF01476	LysM domain
AL522_RS15435	PF01297	Zinc-uptake complex component A periplasmic
AL522_RS15440	PF00005	ABC transporter
AL522_RS15445	PF00950	ABC 3 transport family
AL522_RS15450	PF17864	RuvB AAA lid domain
AL522_RS15450	PF05491	RuvB C-terminal winged helix domain
AL522_RS15450	PF05496	Holliday junction DNA helicase RuvB P-loop domain
AL522_RS15455	PF01330	RuvA N terminal domain
AL522_RS15455	PF07499	RuvA, C-terminal domain
AL522_RS15460	PF02075	Crossover junction endodeoxyribonuclease RuvC
AL522_RS15465	PF01709	Transcriptional regulator
AL522_RS15470	PF00293	NUDIX domain
AL522_RS15475	PF01336	OB-fold nucleic acid binding domain
AL522_RS15475	PF00152	tRNA synthetases class II (D, K and N) 
AL522_RS15475	PF02938	GAD domain
AL522_RS15480	PF01904	Protein of unknown function DUF72
AL522_RS15485	PF01124	MAPEG family
AL522_RS15490	PF13649	Methyltransferase domain
AL522_RS15495	PF08003	Protein of unknown function (DUF1698)
AL522_RS15500	PF01810	LysE type translocator
AL522_RS15515	PF03932	CutC family
AL522_RS15520	PF00155	Aminotransferase class I and II
AL522_RS15525	PF06185	YecM protein
AL522_RS15530	PF03485	Arginyl tRNA synthetase N terminal domain
AL522_RS15530	PF05746	DALR anticodon binding domain
AL522_RS15530	PF00750	tRNA synthetases class I (R)
AL522_RS15535	PF03466	LysR substrate binding domain
AL522_RS15535	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS15540	PF00248	Aldo/keto reductase family
AL522_RS15550	PF00771	FHIPEP family
AL522_RS15555	PF01312	FlhB HrpN YscU SpaS Family
AL522_RS15560	PF04344	Chemotaxis phosphatase, CheZ
AL522_RS15565	PF00072	Response regulator receiver domain
AL522_RS15570	PF00072	Response regulator receiver domain
AL522_RS15570	PF01339	CheB methylesterase
AL522_RS15575	PF01739	CheR methyltransferase, SAM binding domain
AL522_RS15575	PF03705	CheR methyltransferase, all-alpha domain
AL522_RS15580	PF00672	HAMP domain
AL522_RS15580	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL522_RS15580	PF02203	Tar ligand binding domain homologue
AL522_RS15585	PF00672	HAMP domain
AL522_RS15585	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL522_RS15585	PF02203	Tar ligand binding domain homologue
AL522_RS15590	PF00672	HAMP domain
AL522_RS15590	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL522_RS15590	PF02203	Tar ligand binding domain homologue
AL522_RS15595	PF01584	CheW-like domain
AL522_RS15600	PF02895	Signal transducing histidine kinase, homodimeric domain
AL522_RS15600	PF09078	CheY binding
AL522_RS15600	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS15600	PF01627	Hpt domain
AL522_RS15600	PF01584	CheW-like domain
AL522_RS15605	PF00691	OmpA family
AL522_RS15605	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
AL522_RS15610	PF01618	MotA/TolQ/ExbB proton channel family
AL522_RS15615	PF05280	Flagellar transcriptional activator (FlhC)
AL522_RS15620	PF05247	Flagellar transcriptional activator (FlhD)
AL522_RS15625	PF00982	Glycosyltransferase family 20
AL522_RS15630	PF02358	Trehalose-phosphatase
AL522_RS15635	PF00884	Sulfatase
AL522_RS15635	PF08019	Phosphoethanolamine transferase EptA/EptB
AL522_RS15640	PF00486	Transcriptional regulatory protein, C terminal
AL522_RS15640	PF00072	Response regulator receiver domain
AL522_RS15645	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS15645	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS15655	PF01625	Peptide methionine sulfoxide reductase
AL522_RS15665	PF02562	PhoH-like protein
AL522_RS15670	PF04261	Dyp-type peroxidase family 
AL522_RS15675	PF09375	Imelysin
AL522_RS15675	PF13473	Cupredoxin-like domain
AL522_RS15680	PF03239	Iron permease FTR1 family
AL522_RS15685	PF00474	Sodium:solute symporter family
AL522_RS15690	PF18327	Proline utilization A proline dehydrogenase N-terminal domain 
AL522_RS15690	PF01619	Proline dehydrogenase
AL522_RS15690	PF00171	Aldehyde dehydrogenase family
AL522_RS15690	PF14850	DNA-binding domain of Proline dehydrogenase
AL522_RS15695	PF01757	Acyltransferase family
AL522_RS15700	PF00005	ABC transporter
AL522_RS15705	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS15710	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL522_RS15715	PF00291	Pyridoxal-phosphate dependent enzyme
AL522_RS15720	PF02899	Phage integrase, N-terminal SAM-like domain
AL522_RS15725	PF04539	Sigma-70 region 3
AL522_RS15725	PF04542	Sigma-70 region 2 
AL522_RS15725	PF04545	Sigma-70, region 4
AL522_RS15740	PF00700	Bacterial flagellin C-terminal helical region
AL522_RS15740	PF08884	Flagellin D3 domain
AL522_RS15740	PF00669	Bacterial flagellin N-terminal helical region
AL522_RS15745	PF07195	Flagellar hook-associated protein 2 C-terminus
AL522_RS15745	PF02465	Flagellar hook-associated protein 2 N-terminus
AL522_RS15750	PF02561	Flagellar protein FliS
AL522_RS15755	PF05400	Flagellar protein FliT
AL522_RS15760	PF02806	Alpha amylase, C-terminal all-beta domain
AL522_RS15760	PF00128	Alpha amylase, catalytic domain
AL522_RS15765	PF13987	YedD-like protein
AL522_RS15775	PF10796	Sigma-S stabilisation anti-adaptor protein 
AL522_RS15780	PF06183	DinI-like family
AL522_RS15825	PF02049	Flagellar hook-basal body complex protein FliE
AL522_RS15830	PF01514	Secretory protein of YscJ/FliF family
AL522_RS15830	PF08345	Flagellar M-ring protein C-terminal
AL522_RS15835	PF14842	FliG N-terminal domain
AL522_RS15835	PF01706	FliG C-terminal domain
AL522_RS15835	PF14841	FliG middle domain
AL522_RS15840	PF02108	Flagellar assembly protein FliH
AL522_RS15845	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AL522_RS15845	PF18269	T3SS EscN ATPase C-terminal domain
AL522_RS15850	PF02050	Flagellar FliJ protein
AL522_RS15855	PF02120	Flagellar hook-length control protein FliK
AL522_RS15860	PF03748	Flagellar basal body-associated protein FliL
AL522_RS15865	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
AL522_RS15865	PF02154	Flagellar motor switch protein FliM
AL522_RS15870	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
AL522_RS15870	PF16973	Flagellar motor switch protein FliN N-terminal
AL522_RS15875	PF04347	Flagellar biosynthesis protein, FliO
AL522_RS15880	PF00813	FliP family
AL522_RS15885	PF01313	Bacterial export proteins, family 3
AL522_RS15890	PF01311	Bacterial export proteins, family 1
AL522_RS15895	PF00196	Bacterial regulatory proteins, luxR family
AL522_RS15900	PF00672	HAMP domain
AL522_RS15900	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL522_RS15900	PF02203	Tar ligand binding domain homologue
AL522_RS15905	PF10781	Dextransucrase DSRB
AL522_RS15910	PF10733	Protein of unknown function (DUF2525)
AL522_RS15925	PF09926	Uncharacterized small protein (DUF2158)
AL522_RS15930	PF05661	Protein of unknown function (DUF808)
AL522_RS15940	PF03852	DNA mismatch endonuclease Vsr
AL522_RS15945	PF18284	DNA methylase N-terminal domain
AL522_RS15945	PF00145	C-5 cytosine-specific DNA methylase
AL522_RS15955	PF01966	HD domain
AL522_RS15965	PF06167	Glucose-regulated metallo-peptidase M90
AL522_RS15980	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL522_RS15980	PF00529	HlyD membrane-fusion protein of T1SS
AL522_RS15985	PF00873	AcrB/AcrD/AcrF family
AL522_RS15995	PF00440	Bacterial regulatory proteins, tetR family
AL522_RS16020	PF04226	Transglycosylase associated protein
AL522_RS16040	PF05860	haemagglutination activity domain
AL522_RS16040	PF13332	Hemagglutinin repeat
AL522_RS16040	PF04829	Pre-toxin domain with VENN motif
AL522_RS16050	PF04740	LXG domain of WXG superfamily
AL522_RS16060	PF13332	Hemagglutinin repeat
AL522_RS16060	PF05860	haemagglutination activity domain
AL522_RS16060	PF04829	Pre-toxin domain with VENN motif
AL522_RS16065	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
AL522_RS16065	PF08479	POTRA domain, ShlB-type
AL522_RS16065	PF17287	POTRA domain
AL522_RS16070	PF10282	Lactonase, 7-bladed beta-propeller
AL522_RS16075	PF01554	MatE
AL522_RS16080	PF10423	Bacterial AMP nucleoside phosphorylase N-terminus 
AL522_RS16080	PF01048	Phosphorylase superfamily
AL522_RS16095	PF00860	Permease family
AL522_RS16100	PF00072	Response regulator receiver domain
AL522_RS16100	PF00486	Transcriptional regulatory protein, C terminal
AL522_RS16115	PF13407	Periplasmic binding protein domain
AL522_RS16120	PF02653	Branched-chain amino acid transport system / permease component
AL522_RS16125	PF00005	ABC transporter
AL522_RS16130	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS16130	PF00072	Response regulator receiver domain
AL522_RS16130	PF13188	PAS domain
AL522_RS16130	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS16130	PF08448	PAS fold
AL522_RS16135	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS16140	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS16150	PF00005	ABC transporter
AL522_RS16165	PF07969	Amidohydrolase family
AL522_RS16170	PF00005	ABC transporter
AL522_RS16175	PF00005	ABC transporter
AL522_RS16180	PF06007	Phosphonate metabolism protein PhnJ
AL522_RS16185	PF05861	Bacterial phosphonate metabolism protein (PhnI)
AL522_RS16190	PF05845	Bacterial phosphonate metabolism protein (PhnH)
AL522_RS16195	PF06754	Phosphonate metabolism protein PhnG
AL522_RS16200	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS16200	PF07702	UTRA domain
AL522_RS16205	PF00132	Bacterial transferase hexapeptide (six repeats)
AL522_RS16210	PF01202	Shikimate kinase
AL522_RS16225	PF03691	Uncharacterised protein family (UPF0167)
AL522_RS16270	PF03707	Bacterial signalling protein N terminal repeat
AL522_RS16270	PF00563	EAL domain
AL522_RS16270	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS16280	PF00106	short chain dehydrogenase
AL522_RS16285	PF00205	Thiamine pyrophosphate enzyme, central domain
AL522_RS16285	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL522_RS16285	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL522_RS16295	PF01968	Hydantoinase/oxoprolinase
AL522_RS16295	PF05378	Hydantoinase/oxoprolinase N-terminal region
AL522_RS16305	PF01037	Lrp/AsnC ligand binding domain
AL522_RS16310	PF00202	Aminotransferase class-III
AL522_RS16315	PF01546	Peptidase family M20/M25/M40
AL522_RS16315	PF07687	Peptidase dimerisation domain
AL522_RS16320	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL522_RS16330	PF01266	FAD dependent oxidoreductase
AL522_RS16335	PF00005	ABC transporter
AL522_RS16335	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL522_RS16340	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL522_RS16340	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS16345	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS16350	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL522_RS16355	PF01266	FAD dependent oxidoreductase
AL522_RS16365	PF00171	Aldehyde dehydrogenase family
AL522_RS16370	PF00171	Aldehyde dehydrogenase family
AL522_RS16375	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS16375	PF03466	LysR substrate binding domain
AL522_RS16380	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS16380	PF03466	LysR substrate binding domain
AL522_RS16390	PF02653	Branched-chain amino acid transport system / permease component
AL522_RS16395	PF00005	ABC transporter
AL522_RS16400	PF13407	Periplasmic binding protein domain
AL522_RS16425	PF07715	TonB-dependent Receptor Plug Domain
AL522_RS16425	PF00593	TonB dependent receptor
AL522_RS16450	PF00583	Acetyltransferase (GNAT) family
AL522_RS16465	PF02203	Tar ligand binding domain homologue
AL522_RS16465	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL522_RS16465	PF00672	HAMP domain
AL522_RS16475	PF00849	RNA pseudouridylate synthase
AL522_RS16480	PF09831	Uncharacterized protein conserved in bacteria (DUF2058)
AL522_RS16485	PF00440	Bacterial regulatory proteins, tetR family
AL522_RS16485	PF17938	Tetracyclin repressor-like, C-terminal domain
AL522_RS16490	PF04030	D-arabinono-1,4-lactone oxidase 
AL522_RS16490	PF01565	FAD binding domain 
AL522_RS16495	PF01501	Glycosyl transferase family 8
AL522_RS16495	PF00535	Glycosyl transferase family 2
AL522_RS16500	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL522_RS16500	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AL522_RS16510	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
AL522_RS16525	PF00141	Peroxidase
AL522_RS16530	PF00296	Luciferase-like monooxygenase
AL522_RS16545	PF08546	Ketopantoate reductase PanE/ApbA C terminal
AL522_RS16545	PF02558	Ketopantoate reductase PanE/ApbA
AL522_RS16550	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS16555	PF04363	Protein of unknown function (DUF496)
AL522_RS16560	PF04632	Fusaric acid resistance protein family
AL522_RS16565	PF00768	D-alanyl-D-alanine carboxypeptidase
AL522_RS16565	PF07943	Penicillin-binding protein 5, C-terminal domain
AL522_RS16575	PF00929	Exonuclease
AL522_RS16575	PF08411	Exonuclease C-terminal
AL522_RS16580	PF02447	GntP family permease
AL522_RS16585	PF01261	Xylose isomerase-like TIM barrel
AL522_RS16590	PF00596	Class II Aldolase and Adducin N-terminal domain
AL522_RS16595	PF17042	Nucleotide-binding C-terminal domain
AL522_RS16595	PF07005	Sugar-binding N-terminal domain
AL522_RS16600	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL522_RS16600	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL522_RS16605	PF08220	DeoR-like helix-turn-helix domain
AL522_RS16605	PF00455	DeoR C terminal sensor domain
AL522_RS16610	PF13520	Amino acid permease
AL522_RS16615	PF00120	Glutamine synthetase, catalytic domain
AL522_RS16620	PF07722	Peptidase C26
AL522_RS16625	PF07883	Cupin domain
AL522_RS16625	PF01381	Helix-turn-helix
AL522_RS16630	PF01266	FAD dependent oxidoreductase
AL522_RS16635	PF01370	NAD dependent epimerase/dehydratase family
AL522_RS16640	PF01634	ATP phosphoribosyltransferase
AL522_RS16640	PF08029	HisG, C-terminal domain
AL522_RS16645	PF00815	Histidinol dehydrogenase
AL522_RS16650	PF00155	Aminotransferase class I and II
AL522_RS16655	PF08645	Polynucleotide kinase 3 phosphatase
AL522_RS16655	PF00475	Imidazoleglycerol-phosphate dehydratase
AL522_RS16660	PF00117	Glutamine amidotransferase class-I
AL522_RS16665	PF00977	Histidine biosynthesis protein
AL522_RS16670	PF00977	Histidine biosynthesis protein
AL522_RS16675	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
AL522_RS16675	PF01502	Phosphoribosyl-AMP cyclohydrolase
AL522_RS16680	PF04073	Aminoacyl-tRNA editing domain
AL522_RS16685	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL522_RS16695	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL522_RS16695	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
AL522_RS16705	PF00534	Glycosyl transferases group 1
AL522_RS16710	PF16363	GDP-mannose 4,6 dehydratase
AL522_RS16715	PF16363	GDP-mannose 4,6 dehydratase
AL522_RS16720	PF00534	Glycosyl transferases group 1
AL522_RS16730	PF00005	ABC transporter
AL522_RS16740	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AL522_RS16740	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AL522_RS16740	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AL522_RS16740	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AL522_RS16745	PF00483	Nucleotidyl transferase
AL522_RS16745	PF01050	Mannose-6-phosphate isomerase
AL522_RS16750	PF16363	GDP-mannose 4,6 dehydratase
AL522_RS16755	PF00483	Nucleotidyl transferase
AL522_RS16765	PF00534	Glycosyl transferases group 1
AL522_RS16770	PF04230	Polysaccharide pyruvyl transferase
AL522_RS16775	PF09008	Head binding
AL522_RS16780	PF00534	Glycosyl transferases group 1
AL522_RS16785	PF00535	Glycosyl transferase family 2
AL522_RS16790	PF00535	Glycosyl transferase family 2
AL522_RS16800	PF02706	Chain length determinant protein
AL522_RS16800	PF13614	AAA domain
AL522_RS16800	PF13807	G-rich domain on putative tyrosine kinase
AL522_RS16805	PF01451	Low molecular weight phosphotyrosine protein phosphatase
AL522_RS16810	PF18412	Outer-membrane lipoprotein Wza C-terminal domain
AL522_RS16810	PF10531	SLBB domain
AL522_RS16810	PF02563	Polysaccharide biosynthesis/export protein
AL522_RS16815	PF02397	Bacterial sugar transferase
AL522_RS16820	PF00571	CBS domain
AL522_RS16820	PF03471	Transporter associated domain
AL522_RS16820	PF03741	Integral membrane protein TerC family
AL522_RS16825	PF05170	AsmA family
AL522_RS16830	PF00692	dUTPase
AL522_RS16835	PF00485	Phosphoribulokinase / Uridine kinase family
AL522_RS16840	PF01569	PAP2 superfamily
AL522_RS16845	PF05231	MASE1
AL522_RS16845	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS16845	PF00563	EAL domain
AL522_RS16845	PF08447	PAS fold
AL522_RS16845	PF08448	PAS fold
AL522_RS16845	PF13426	PAS domain
AL522_RS16850	PF00012	Hsp70 protein
AL522_RS16855	PF04966	Carbohydrate-selective porin, OprB family
AL522_RS16860	PF00248	Aldo/keto reductase family
AL522_RS16865	PF13533	Biotin-lipoyl like
AL522_RS16870	PF00873	AcrB/AcrD/AcrF family
AL522_RS16875	PF00873	AcrB/AcrD/AcrF family
AL522_RS16880	PF07690	Major Facilitator Superfamily
AL522_RS16885	PF00672	HAMP domain
AL522_RS16885	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS16885	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS16890	PF00486	Transcriptional regulatory protein, C terminal
AL522_RS16890	PF00072	Response regulator receiver domain
AL522_RS16895	PF01136	Peptidase family U32
AL522_RS16895	PF16325	Peptidase family U32 C-terminal domain
AL522_RS16900	PF00781	Diacylglycerol kinase catalytic domain
AL522_RS16905	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AL522_RS16905	PF13378	Enolase C-terminal domain-like
AL522_RS16910	PF08240	Alcohol dehydrogenase GroES-like domain
AL522_RS16910	PF00107	Zinc-binding dehydrogenase
AL522_RS16915	PF07690	Major Facilitator Superfamily
AL522_RS16920	PF01232	Mannitol dehydrogenase Rossmann domain
AL522_RS16920	PF08125	Mannitol dehydrogenase C-terminal domain
AL522_RS16925	PF07729	FCD domain
AL522_RS16925	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS16930	PF08543	Phosphomethylpyrimidine kinase
AL522_RS16935	PF02110	Hydroxyethylthiazole kinase family
AL522_RS16970	PF13192	Thioredoxin domain
AL522_RS16970	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL522_RS16975	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AL522_RS16975	PF00578	AhpC/TSA family
AL522_RS16980	PF00583	Acetyltransferase (GNAT) family
AL522_RS16985	PF10609	NUBPL iron-transfer P-loop NTPase
AL522_RS16990	PF09334	tRNA synthetases class I (M)
AL522_RS16990	PF01588	Putative tRNA binding domain
AL522_RS16995	PF03788	LrgA family
AL522_RS17000	PF04172	LrgB-like family 
AL522_RS17005	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AL522_RS17005	PF08211	Cytidine and deoxycytidylate deaminase zinc-binding region 
AL522_RS17010	PF00390	Malic enzyme, N-terminal domain
AL522_RS17010	PF03949	Malic enzyme, NAD binding domain
AL522_RS17015	PF02698	DUF218 domain
AL522_RS17020	PF02653	Branched-chain amino acid transport system / permease component
AL522_RS17025	PF00005	ABC transporter
AL522_RS17030	PF13407	Periplasmic binding protein domain
AL522_RS17035	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS17040	PF04235	Protein of unknown function (DUF418)
AL522_RS17045	PF01227	GTP cyclohydrolase I
AL522_RS17050	PF06779	Uncharacterised MFS-type transporter YbfB
AL522_RS17055	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS17055	PF03466	LysR substrate binding domain
AL522_RS17060	PF00107	Zinc-binding dehydrogenase
AL522_RS17060	PF08240	Alcohol dehydrogenase GroES-like domain
AL522_RS17065	PF00756	Putative esterase
AL522_RS17070	PF00005	ABC transporter
AL522_RS17075	PF01032	FecCD transport family
AL522_RS17080	PF00324	Amino acid permease
AL522_RS17085	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS17085	PF03466	LysR substrate binding domain
AL522_RS17095	PF03601	Conserved hypothetical protein 698
AL522_RS17100	PF01261	Xylose isomerase-like TIM barrel
AL522_RS17105	PF02378	Phosphotransferase system, EIIC 
AL522_RS17105	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
AL522_RS17110	PF00294	pfkB family carbohydrate kinase
AL522_RS17115	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL522_RS17115	PF00381	PTS HPr component phosphorylation site
AL522_RS17120	PF03692	Putative zinc- or iron-chelating domain
AL522_RS17125	PF09285	Elongation factor P, C-terminal
AL522_RS17125	PF08207	Elongation factor P (EF-P) KOW-like domain
AL522_RS17125	PF01132	Elongation factor P (EF-P) OB domain
AL522_RS17130	PF02492	CobW/HypB/UreG, nucleotide-binding domain
AL522_RS17130	PF07683	Cobalamin synthesis protein cobW C-terminal domain
AL522_RS17135	PF01569	PAP2 superfamily
AL522_RS17145	PF00877	NlpC/P60 family
AL522_RS17150	PF00563	EAL domain
AL522_RS17150	PF12792	CSS motif domain associated with EAL 
AL522_RS17155	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL522_RS17160	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS17165	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL522_RS17165	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS17170	PF00005	ABC transporter
AL522_RS17170	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL522_RS17175	PF13989	YejG-like protein
AL522_RS17180	PF07690	Major Facilitator Superfamily
AL522_RS17185	PF01479	S4 domain
AL522_RS17185	PF00849	RNA pseudouridylate synthase
AL522_RS17190	PF00271	Helicase conserved C-terminal domain
AL522_RS17190	PF04851	Type III restriction enzyme, res subunit
AL522_RS17195	PF01386	Ribosomal L25p family
AL522_RS17200	PF04245	37-kD nucleoid-associated bacterial protein
AL522_RS17205	PF07208	Protein of unknown function (DUF1414)
AL522_RS17210	PF11893	Domain of unknown function (DUF3413)
AL522_RS17210	PF00884	Sulfatase
AL522_RS17220	PF13356	Arm DNA-binding domain
AL522_RS17220	PF00589	Phage integrase family
AL522_RS17250	PF13087	AAA domain
AL522_RS17250	PF13086	AAA domain
AL522_RS17250	PF13087	AAA domain
AL522_RS17250	PF13195	Protein of unknown function (DUF4011)
AL522_RS17250	PF13086	AAA domain
AL522_RS17250	PF13195	Protein of unknown function (DUF4011)
AL522_RS17325	PF00589	Phage integrase family
AL522_RS17325	PF02899	Phage integrase, N-terminal SAM-like domain
AL522_RS17355	PF05930	Prophage CP4-57 regulatory protein (AlpA)
AL522_RS17375	PF17837	4'-phosphopantetheinyl transferase N-terminal domain
AL522_RS17375	PF01648	4'-phosphopantetheinyl transferase superfamily
AL522_RS17380	PF00005	ABC transporter
AL522_RS17385	PF13532	2OG-Fe(II) oxygenase superfamily
AL522_RS17390	PF02424	ApbE family
AL522_RS17395	PF00267	Gram-negative porin
AL522_RS17405	PF00664	ABC transporter transmembrane region
AL522_RS17405	PF00005	ABC transporter
AL522_RS17430	PF07690	Major Facilitator Superfamily
AL522_RS17435	PF16359	RcsD-ABL domain
AL522_RS17435	PF01627	Hpt domain
AL522_RS17435	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS17440	PF00072	Response regulator receiver domain
AL522_RS17440	PF00196	Bacterial regulatory proteins, luxR family
AL522_RS17445	PF00072	Response regulator receiver domain
AL522_RS17445	PF09456	RcsC Alpha-Beta-Loop (ABL)
AL522_RS17445	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS17445	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS17450	PF00521	DNA gyrase/topoisomerase IV, subunit A
AL522_RS17450	PF03989	DNA gyrase C-terminal domain, beta-propeller
AL522_RS17460	PF02867	Ribonucleotide reductase, barrel domain
AL522_RS17460	PF00317	Ribonucleotide reductase, all-alpha domain
AL522_RS17460	PF03477	ATP cone domain
AL522_RS17465	PF00268	Ribonucleotide reductase, small chain
AL522_RS17470	PF00111	2Fe-2S iron-sulfur cluster binding domain
AL522_RS17475	PF00994	Probable molybdopterin binding domain
AL522_RS17480	PF05957	Bacterial protein of unknown function (DUF883)
AL522_RS17485	PF04349	Periplasmic glucan biosynthesis protein, MdoG
AL522_RS17490	PF13673	Acetyltransferase (GNAT) domain
AL522_RS17495	PF00361	Proton-conducting membrane transporter
AL522_RS17500	PF00361	Proton-conducting membrane transporter
AL522_RS17505	PF00361	Proton-conducting membrane transporter
AL522_RS17505	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
AL522_RS17510	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
AL522_RS17515	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
AL522_RS17520	PF12838	4Fe-4S dicluster domain
AL522_RS17525	PF00146	NADH dehydrogenase
AL522_RS17530	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AL522_RS17530	PF01568	Molydopterin dinucleotide binding domain
AL522_RS17530	PF00384	Molybdopterin oxidoreductase
AL522_RS17530	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
AL522_RS17535	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AL522_RS17535	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
AL522_RS17535	PF10531	SLBB domain
AL522_RS17545	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
AL522_RS17545	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
AL522_RS17550	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AL522_RS17555	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
AL522_RS17560	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS17560	PF03466	LysR substrate binding domain
AL522_RS17565	PF00155	Aminotransferase class I and II
AL522_RS17575	PF13419	Haloacid dehalogenase-like hydrolase
AL522_RS17580	PF03887	YfbU domain
AL522_RS17585	PF04217	Protein of unknown function, DUF412
AL522_RS17590	PF00871	Acetokinase family
AL522_RS17595	PF01515	Phosphate acetyl/butaryl transferase
AL522_RS17595	PF07085	DRTGG domain
AL522_RS17600	PF00293	NUDIX domain
AL522_RS17605	PF14834	Glutathione S-transferase, C-terminal domain
AL522_RS17605	PF02798	Glutathione S-transferase, N-terminal domain
AL522_RS17610	PF08338	Domain of unknown function (DUF1731)
AL522_RS17610	PF01370	NAD dependent epimerase/dehydratase family
AL522_RS17615	PF00005	ABC transporter
AL522_RS17620	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS17625	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS17630	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL522_RS17635	PF02441	Flavoprotein
AL522_RS17640	PF00156	Phosphoribosyl transferase domain
AL522_RS17645	PF02674	Colicin V production protein
AL522_RS17650	PF05036	Sporulation related domain
AL522_RS17655	PF08245	Mur ligase middle domain
AL522_RS17655	PF02875	Mur ligase family, glutamate ligase domain
AL522_RS17660	PF01039	Carboxyl transferase domain
AL522_RS17660	PF17848	Acetyl-coA carboxylase zinc finger domain
AL522_RS17665	PF09335	SNARE associated Golgi protein
AL522_RS17670	PF01416	tRNA pseudouridine synthase
AL522_RS17675	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL522_RS17675	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL522_RS17680	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL522_RS17680	PF11890	Domain of unknown function (DUF3410)
AL522_RS17680	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL522_RS17685	PF02311	AraC-like ligand binding domain
AL522_RS17685	PF12833	Helix-turn-helix domain
AL522_RS17700	PF00581	Rhodanese-like domain
AL522_RS17705	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS17705	PF00155	Aminotransferase class I and II
AL522_RS17710	PF00109	Beta-ketoacyl synthase, N-terminal domain
AL522_RS17710	PF02801	Beta-ketoacyl synthase, C-terminal domain
AL522_RS17715	PF01266	FAD dependent oxidoreductase
AL522_RS17715	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
AL522_RS17720	PF08891	YfcL protein
AL522_RS17725	PF04315	Elongation factor P hydroxylase
AL522_RS17730	PF01925	Sulfite exporter TauE/SafE
AL522_RS17735	PF03411	Penicillin-insensitive murein endopeptidase
AL522_RS17740	PF01264	Chorismate synthase
AL522_RS17745	PF05175	Methyltransferase small domain
AL522_RS17750	PF01713	Smr domain
AL522_RS17755	PF00300	Histidine phosphatase superfamily (branch 1)
AL522_RS17760	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
AL522_RS17760	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AL522_RS17760	PF00378	Enoyl-CoA hydratase/isomerase
AL522_RS17765	PF00108	Thiolase, N-terminal domain
AL522_RS17765	PF02803	Thiolase, C-terminal domain
AL522_RS17770	PF04175	Protein of unknown function (DUF406) 
AL522_RS17775	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
AL522_RS17780	PF04333	MlaA lipoprotein
AL522_RS17785	PF03918	Cytochrome C biogenesis protein
AL522_RS17790	PF03918	Cytochrome C biogenesis protein
AL522_RS17795	PF08534	Redoxin
AL522_RS17800	PF16327	Cytochrome c-type biogenesis protein CcmF C-terminal
AL522_RS17800	PF01578	Cytochrome C assembly protein
AL522_RS17805	PF03100	CcmE
AL522_RS17810	PF04995	Heme exporter protein D (CcmD)
AL522_RS17815	PF01578	Cytochrome C assembly protein
AL522_RS17820	PF03379	CcmB protein
AL522_RS17825	PF00005	ABC transporter
AL522_RS17830	PF01226	Formate/nitrite transporter
AL522_RS17865	PF01476	LysM domain
AL522_RS17865	PF06725	3D domain
AL522_RS17875	PF10106	Uncharacterized protein conserved in bacteria (DUF2345)
AL522_RS17875	PF04717	Type VI secretion system, phage-baseplate injector
AL522_RS17875	PF13296	Putative type VI secretion system Rhs element Vgr
AL522_RS17885	PF12833	Helix-turn-helix domain
AL522_RS17900	PF07690	Major Facilitator Superfamily
AL522_RS17905	PF08450	SMP-30/Gluconolactonase/LRE-like region
AL522_RS17925	PF01614	Bacterial transcriptional regulator
AL522_RS17925	PF09339	IclR helix-turn-helix domain
AL522_RS17935	PF13533	Biotin-lipoyl like
AL522_RS17940	PF00155	Aminotransferase class I and II
AL522_RS17950	PF06580	Histidine kinase
AL522_RS17950	PF07694	5TMR of 5TMR-LYT
AL522_RS17950	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS17955	PF00072	Response regulator receiver domain
AL522_RS17955	PF04397	LytTr DNA-binding domain
AL522_RS17960	PF02685	Glucokinase
AL522_RS17965	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL522_RS17965	PF00205	Thiamine pyrophosphate enzyme, central domain
AL522_RS17965	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL522_RS17970	PF00248	Aldo/keto reductase family
AL522_RS17975	PF10697	Protein of unknown function (DUF2502)
AL522_RS17980	PF01566	Natural resistance-associated macrophage protein
AL522_RS17985	PF07670	Nucleoside recognition
AL522_RS17985	PF01773	Na+ dependent nucleoside transporter N-terminus
AL522_RS17985	PF07662	Na+ dependent nucleoside transporter C-terminus
AL522_RS18000	PF01226	Formate/nitrite transporter
AL522_RS18005	PF07037	Putative transcription regulator (DUF1323)
AL522_RS18010	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AL522_RS18045	PF03466	LysR substrate binding domain
AL522_RS18045	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS18050	PF13593	SBF-like CPA transporter family (DUF4137)
AL522_RS18055	PF12843	Putative quorum-sensing-regulated virulence factor
AL522_RS18060	PF00533	BRCA1 C Terminus (BRCT) domain
AL522_RS18060	PF03120	NAD-dependent DNA ligase OB-fold domain
AL522_RS18060	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
AL522_RS18060	PF12826	Helix-hairpin-helix motif
AL522_RS18060	PF01653	NAD-dependent DNA ligase adenylation domain
AL522_RS18065	PF04354	ZipA, C-terminal FtsZ-binding domain
AL522_RS18075	PF00291	Pyridoxal-phosphate dependent enzyme
AL522_RS18085	PF00381	PTS HPr component phosphorylation site
AL522_RS18090	PF02896	PEP-utilising enzyme, TIM barrel domain
AL522_RS18090	PF00391	PEP-utilising enzyme, mobile domain
AL522_RS18090	PF05524	PEP-utilising enzyme, N-terminal
AL522_RS18095	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
AL522_RS18100	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS18100	PF00672	HAMP domain
AL522_RS18100	PF16527	Two-component sensor protein CpxA, periplasmic domain
AL522_RS18100	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS18105	PF00486	Transcriptional regulatory protein, C terminal
AL522_RS18105	PF00072	Response regulator receiver domain
AL522_RS18110	PF00291	Pyridoxal-phosphate dependent enzyme
AL522_RS18115	PF00005	ABC transporter
AL522_RS18120	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS18125	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS18135	PF06572	Protein of unknown function (DUF1131)
AL522_RS18145	PF00583	Acetyltransferase (GNAT) family
AL522_RS18150	PF01520	N-acetylmuramoyl-L-alanine amidase
AL522_RS18155	PF01218	Coproporphyrinogen III oxidase
AL522_RS18160	PF00923	Transaldolase/Fructose-6-phosphate aldolase
AL522_RS18165	PF00456	Transketolase, thiamine diphosphate binding domain
AL522_RS18165	PF02780	Transketolase, C-terminal domain
AL522_RS18165	PF02779	Transketolase, pyrimidine binding domain
AL522_RS18170	PF00144	Beta-lactamase
AL522_RS18175	PF06674	Protein of unknown function (DUF1176)
AL522_RS18180	PF00293	NUDIX domain
AL522_RS18185	PF00324	Amino acid permease
AL522_RS18190	PF07338	Protein of unknown function (DUF1471)
AL522_RS18195	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS18195	PF07730	Histidine kinase
AL522_RS18195	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
AL522_RS18195	PF00672	HAMP domain
AL522_RS18200	PF00072	Response regulator receiver domain
AL522_RS18200	PF00196	Bacterial regulatory proteins, luxR family
AL522_RS18205	PF00873	AcrB/AcrD/AcrF family
AL522_RS18210	PF03960	ArsC family
AL522_RS18215	PF07687	Peptidase dimerisation domain
AL522_RS18215	PF01546	Peptidase family M20/M25/M40
AL522_RS18220	PF13980	Uncharacterised protein family (UPF0370)
AL522_RS18225	PF02230	Phospholipase/Carboxylesterase
AL522_RS18230	PF08351	Domain of unknown function (DUF1726)
AL522_RS18230	PF13718	GNAT acetyltransferase 2
AL522_RS18230	PF05127	Helicase
AL522_RS18230	PF17176	tRNA-binding domain
AL522_RS18235	PF04228	Putative neutral zinc metallopeptidase
AL522_RS18240	PF01259	SAICAR synthetase
AL522_RS18245	PF06804	NlpB/DapX lipoprotein
AL522_RS18250	PF00701	Dihydrodipicolinate synthetase family
AL522_RS18255	PF01842	ACT domain
AL522_RS18260	PF00578	AhpC/TSA family
AL522_RS18265	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS18265	PF08448	PAS fold
AL522_RS18280	PF01435	Peptidase family M48
AL522_RS18285	PF03960	ArsC family
AL522_RS18290	PF00308	Bacterial dnaA  protein
AL522_RS18295	PF00860	Permease family
AL522_RS18305	PF00586	AIR synthase related protein, N-terminal domain
AL522_RS18305	PF02769	AIR synthase related protein, C-terminal domain
AL522_RS18310	PF00551	Formyl transferase
AL522_RS18315	PF00005	ABC transporter
AL522_RS18320	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS18325	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS18330	PF13089	Polyphosphate kinase N-terminal domain
AL522_RS18330	PF17941	Polyphosphate kinase C-terminal domain 1
AL522_RS18330	PF13090	Polyphosphate kinase C-terminal domain 2
AL522_RS18330	PF02503	Polyphosphate kinase middle domain
AL522_RS18335	PF02541	Ppx/GppA phosphatase family
AL522_RS18340	PF03848	Tellurite resistance protein TehB
AL522_RS18350	PF00571	CBS domain
AL522_RS18350	PF01769	Divalent cation transporter
AL522_RS18350	PF03448	MgtE intracellular N domain
AL522_RS18375	PF00117	Glutamine amidotransferase class-I
AL522_RS18375	PF02540	NAD synthase
AL522_RS18375	PF00958	GMP synthase C terminal domain
AL522_RS18380	PF00571	CBS domain
AL522_RS18380	PF00478	IMP dehydrogenase / GMP reductase domain
AL522_RS18385	PF02601	Exonuclease VII, large subunit
AL522_RS18385	PF13742	OB-fold nucleic acid binding domain
AL522_RS18390	PF02868	Thermolysin metallopeptidase, alpha-helical domain
AL522_RS18390	PF16485	Protealysin propeptide
AL522_RS18390	PF01447	Thermolysin metallopeptidase, catalytic domain
AL522_RS18400	PF01011	PQQ enzyme repeat
AL522_RS18400	PF13360	PQQ-like domain
AL522_RS18405	PF07191	zinc-ribbons
AL522_RS18410	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
AL522_RS18410	PF01926	50S ribosome-binding GTPase
AL522_RS18415	PF13360	PQQ-like domain
AL522_RS18420	PF09976	Tetratricopeptide repeat-like domain
AL522_RS18425	PF13393	Histidyl-tRNA synthetase
AL522_RS18425	PF03129	Anticodon binding domain
AL522_RS18430	PF04551	GcpE protein
AL522_RS18435	PF13464	Domain of unknown function (DUF4115)
AL522_RS18445	PF04055	Radical SAM superfamily
AL522_RS18450	PF00334	Nucleoside diphosphate kinase
AL522_RS18455	PF00905	Penicillin binding protein transpeptidase domain
AL522_RS18455	PF00912	Transglycosylase
AL522_RS18455	PF06832	Penicillin-Binding Protein C-terminus Family
AL522_RS18460	PF00207	Alpha-2-macroglobulin family
AL522_RS18460	PF07703	Alpha-2-macroglobulin bait region domain
AL522_RS18460	PF17973	Bacterial Alpha-2-macroglobulin MG10 domain
AL522_RS18460	PF17970	Bacterial Alpha-2-macroglobulin MG1 domain 
AL522_RS18460	PF17972	Bacterial Alpha-2-macroglobulin MG5 domain
AL522_RS18460	PF17962	Bacterial macroglobulin domain 6
AL522_RS18460	PF01835	MG2 domain
AL522_RS18460	PF07678	A-macroglobulin TED domain
AL522_RS18460	PF11974	Bacterial alpha-2-macroglobulin MG3 domain
AL522_RS18465	PF00581	Rhodanese-like domain
AL522_RS18470	PF14581	SseB protein C-terminal domain
AL522_RS18470	PF07179	SseB protein N-terminal domain
AL522_RS18475	PF00883	Cytosol aminopeptidase family, catalytic domain
AL522_RS18475	PF12404	Peptidase 
AL522_RS18480	PF00266	Aminotransferase class-V
AL522_RS18485	PF02082	Transcriptional regulator
AL522_RS18490	PF00588	SpoU rRNA Methylase family
AL522_RS18495	PF00459	Inositol monophosphatase family
AL522_RS18505	PF03824	High-affinity nickel-transport protein
AL522_RS18515	PF00874	PRD domain
AL522_RS18520	PF12832	MFS_1 like family
AL522_RS18525	PF00464	Serine hydroxymethyltransferase
AL522_RS18530	PF00970	Oxidoreductase FAD-binding domain
AL522_RS18530	PF00042	Globin
AL522_RS18530	PF00175	Oxidoreductase NAD-binding domain 
AL522_RS18535	PF00543	Nitrogen regulatory protein P-II
AL522_RS18540	PF00158	Sigma-54 interaction domain
AL522_RS18540	PF00072	Response regulator receiver domain
AL522_RS18545	PF13942	YfhG lipoprotein
AL522_RS18550	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS18550	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS18555	PF18076	Formylglycinamide ribonucleotide amidotransferase N-terminal
AL522_RS18555	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
AL522_RS18555	PF02769	AIR synthase related protein, C-terminal domain
AL522_RS18560	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL522_RS18560	PF01464	Transglycosylase SLT domain
AL522_RS18565	PF14437	MafB19-like deaminase
AL522_RS18575	PF01418	Helix-turn-helix domain, rpiR family
AL522_RS18575	PF01380	SIS domain
AL522_RS18580	PF12838	4Fe-4S dicluster domain
AL522_RS18585	PF01648	4'-phosphopantetheinyl transferase superfamily
AL522_RS18590	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
AL522_RS18595	PF02565	Recombination protein O C terminal
AL522_RS18595	PF11967	Recombination protein O N terminal
AL522_RS18600	PF01926	50S ribosome-binding GTPase
AL522_RS18600	PF07650	KH domain
AL522_RS18605	PF14622	Ribonuclease-III-like
AL522_RS18605	PF00035	Double-stranded RNA binding motif
AL522_RS18610	PF10502	Signal peptidase, peptidase S26 
AL522_RS18615	PF03144	Elongation factor Tu domain 2
AL522_RS18615	PF00009	Elongation factor Tu GTP binding domain
AL522_RS18615	PF00679	Elongation factor G C-terminus
AL522_RS18615	PF06421	GTP-binding protein LepA C-terminus
AL522_RS18625	PF03888	MucB/RseB N-terminal domain
AL522_RS18625	PF17188	MucB/RseB C-terminal domain
AL522_RS18630	PF03872	Anti sigma-E protein RseA, N-terminal domain
AL522_RS18630	PF03873	Anti sigma-E protein RseA, C-terminal domain
AL522_RS18635	PF04542	Sigma-70 region 2 
AL522_RS18635	PF08281	Sigma-70, region 4
AL522_RS18640	PF00890	FAD binding domain
AL522_RS18640	PF02910	Fumarate reductase flavoprotein C-term
AL522_RS18645	PF05175	Methyltransferase small domain
AL522_RS18650	PF00271	Helicase conserved C-terminal domain
AL522_RS18650	PF00270	DEAD/DEAH box helicase
AL522_RS18660	PF01228	Glycine radical
AL522_RS18665	PF03167	Uracil DNA glycosylase superfamily
AL522_RS18670	PF01025	GrpE
AL522_RS18675	PF01513	ATP-NAD kinase
AL522_RS18680	PF02463	RecF/RecN/SMC N terminal domain
AL522_RS18685	PF04355	SmpA / OmlA family
AL522_RS18690	PF03658	RnfH family Ubiquitin
AL522_RS18695	PF03364	Polyketide cyclase / dehydrase and lipid transport
AL522_RS18700	PF01668	SmpB protein
AL522_RS18710	PF00589	Phage integrase family
AL522_RS18710	PF13356	Arm DNA-binding domain
AL522_RS18730	PF04606	Ogr/Delta-like zinc finger
AL522_RS18770	PF02511	Thymidylate synthase complementing protein
AL522_RS18810	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AL522_RS18810	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL522_RS18820	PF13407	Periplasmic binding protein domain
AL522_RS18825	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL522_RS18825	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AL522_RS18830	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AL522_RS18830	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL522_RS18835	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL522_RS18835	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL522_RS18835	PF01842	ACT domain
AL522_RS18840	PF03328	HpcH/HpaI aldolase/citrate lyase family
AL522_RS18845	PF00171	Aldehyde dehydrogenase family
AL522_RS18855	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL522_RS18855	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL522_RS18855	PF00205	Thiamine pyrophosphate enzyme, central domain
AL522_RS18860	PF01261	Xylose isomerase-like TIM barrel
AL522_RS18885	PF14403	Circularly permuted ATP-grasp type 2 
AL522_RS18890	PF14403	Circularly permuted ATP-grasp type 2 
AL522_RS18890	PF04168	A predicted alpha-helical domain with a conserved ER motif.
AL522_RS18895	PF01841	Transglutaminase-like superfamily
AL522_RS18895	PF08379	Bacterial transglutaminase-like N-terminal region
AL522_RS18905	PF10820	Protein of unknown function (DUF2543)
AL522_RS18910	PF00313	'Cold-shock' DNA-binding domain
AL522_RS18920	PF00689	Cation transporting ATPase, C-terminus
AL522_RS18920	PF00690	Cation transporter/ATPase, N-terminus
AL522_RS18925	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
AL522_RS18930	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS18935	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS18935	PF12911	N-terminal TM domain of oligopeptide transport permease C
AL522_RS18940	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL522_RS18940	PF00005	ABC transporter
AL522_RS18945	PF00005	ABC transporter
AL522_RS18945	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
AL522_RS18950	PF13302	Acetyltransferase (GNAT) domain
AL522_RS18960	PF02574	Homocysteine S-methyltransferase
AL522_RS18965	PF00324	Amino acid permease
AL522_RS18970	PF09400	Protein of unknown function (DUF2002)
AL522_RS18975	PF05957	Bacterial protein of unknown function (DUF883)
AL522_RS18980	PF00462	Glutaredoxin
AL522_RS18985	PF07972	NrdI Flavodoxin like 
AL522_RS18990	PF08343	Ribonucleotide reductase N-terminal
AL522_RS18990	PF00317	Ribonucleotide reductase, all-alpha domain
AL522_RS18990	PF02867	Ribonucleotide reductase, barrel domain
AL522_RS18995	PF00268	Ribonucleotide reductase, small chain
AL522_RS19005	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS19010	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AL522_RS19015	PF07690	Major Facilitator Superfamily
AL522_RS19020	PF01047	MarR family
AL522_RS19025	PF00529	HlyD membrane-fusion protein of T1SS
AL522_RS19025	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AL522_RS19030	PF07690	Major Facilitator Superfamily
AL522_RS19035	PF00588	SpoU rRNA Methylase family
AL522_RS19035	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AL522_RS19040	PF00085	Thioredoxin
AL522_RS19045	PF03942	DTW domain
AL522_RS19050	PF13380	CoA binding domain
AL522_RS19050	PF13607	Succinyl-CoA ligase like flavodoxin domain
AL522_RS19050	PF00583	Acetyltransferase (GNAT) family
AL522_RS19055	PF13091	PLD-like domain
AL522_RS19060	PF00083	Sugar (and other) transporter
AL522_RS19090	PF17871	AAA lid domain
AL522_RS19090	PF10431	C-terminal, D2-small domain, of ClpB protein 
AL522_RS19090	PF00004	ATPase family associated with various cellular activities (AAA)
AL522_RS19090	PF07724	AAA domain (Cdc48 subfamily)
AL522_RS19090	PF02861	Clp amino terminal domain, pathogenicity island component
AL522_RS19095	PF02578	Multi-copper polyphenol oxidoreductase laccase
AL522_RS19100	PF01479	S4 domain
AL522_RS19100	PF00849	RNA pseudouridylate synthase
AL522_RS19105	PF13525	Outer membrane lipoprotein
AL522_RS19110	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
AL522_RS19115	PF01817	Chorismate mutase type II
AL522_RS19115	PF00800	Prephenate dehydratase
AL522_RS19120	PF02153	Prephenate dehydrogenase
AL522_RS19120	PF01817	Chorismate mutase type II
AL522_RS19125	PF00793	DAHP synthetase I family
AL522_RS19135	PF01245	Ribosomal protein L19
AL522_RS19140	PF01746	tRNA (Guanine-1)-methyltransferase
AL522_RS19145	PF05239	PRC-barrel domain
AL522_RS19145	PF01782	RimM N-terminal domain
AL522_RS19150	PF00886	Ribosomal protein S16
AL522_RS19155	PF02978	Signal peptide binding domain
AL522_RS19155	PF02881	SRP54-type protein, helical bundle domain
AL522_RS19155	PF00448	SRP54-type protein, GTPase domain
AL522_RS19160	PF01578	Cytochrome C assembly protein
AL522_RS19165	PF00571	CBS domain
AL522_RS19165	PF03471	Transporter associated domain
AL522_RS19165	PF01595	Cyclin M transmembrane N-terminal domain
AL522_RS19170	PF02664	S-Ribosylhomocysteinase (LuxS)
AL522_RS19175	PF04262	Glutamate-cysteine ligase 
AL522_RS19180	PF09335	SNARE associated Golgi protein
AL522_RS19185	PF13419	Haloacid dehalogenase-like hydrolase
AL522_RS19210	PF02599	Global regulator protein family
AL522_RS19215	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AL522_RS19215	PF02272	DHHA1 domain
AL522_RS19215	PF01411	tRNA synthetases class II (A)
AL522_RS19220	PF02631	RecX family
AL522_RS19225	PF00154	recA bacterial DNA recombination protein
AL522_RS19230	PF02464	Competence-damaged protein
AL522_RS19235	PF13649	Methyltransferase domain
AL522_RS19240	PF00701	Dihydrodipicolinate synthetase family
AL522_RS19245	PF03831	PhnA domain
AL522_RS19245	PF08274	PhnA Zinc-Ribbon 
AL522_RS19250	PF13406	Transglycosylase SLT domain
AL522_RS19255	PF02665	Nitrate reductase gamma subunit
AL522_RS19260	PF02613	Nitrate reductase delta subunit
AL522_RS19265	PF13247	4Fe-4S dicluster domain
AL522_RS19265	PF14711	Respiratory nitrate reductase beta C-terminal
AL522_RS19270	PF14710	Respiratory nitrate reductase alpha N-terminal
AL522_RS19270	PF01568	Molydopterin dinucleotide binding domain
AL522_RS19270	PF00384	Molybdopterin oxidoreductase
AL522_RS19275	PF07690	Major Facilitator Superfamily
AL522_RS19280	PF00196	Bacterial regulatory proteins, luxR family
AL522_RS19280	PF00072	Response regulator receiver domain
AL522_RS19285	PF05188	MutS domain II
AL522_RS19285	PF05192	MutS domain III
AL522_RS19285	PF01624	MutS domain I
AL522_RS19285	PF05190	MutS family domain IV
AL522_RS19285	PF00488	MutS domain V
AL522_RS19290	PF04545	Sigma-70, region 4
AL522_RS19290	PF04542	Sigma-70 region 2 
AL522_RS19290	PF00140	Sigma-70 factor, region 1.2
AL522_RS19290	PF04539	Sigma-70 region 3
AL522_RS19295	PF01476	LysM domain
AL522_RS19295	PF01551	Peptidase family M23
AL522_RS19305	PF01975	Survival protein SurE
AL522_RS19310	PF01142	tRNA pseudouridine synthase D (TruD)
AL522_RS19315	PF02542	YgbB family
AL522_RS19320	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
AL522_RS19325	PF04977	Septum formation initiator
AL522_RS19330	PF12084	Protein of unknown function (DUF3561)
AL522_RS19340	PF00009	Elongation factor Tu GTP binding domain
AL522_RS19345	PF01507	Phosphoadenosine phosphosulfate reductase family
AL522_RS19350	PF14824	Sirohaem biosynthesis protein central
AL522_RS19350	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL522_RS19350	PF10414	Sirohaem synthase dimerisation region
AL522_RS19355	PF04389	Peptidase family M28
AL522_RS19365	PF01507	Phosphoadenosine phosphosulfate reductase family
AL522_RS19370	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL522_RS19370	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL522_RS19375	PF00258	Flavodoxin
AL522_RS19375	PF00667	FAD binding domain
AL522_RS19375	PF00175	Oxidoreductase NAD-binding domain 
AL522_RS19380	PF01242	6-pyruvoyl tetrahydropterin synthase
AL522_RS19385	PF04055	Radical SAM superfamily
AL522_RS19390	PF03952	Enolase, N-terminal domain
AL522_RS19390	PF00113	Enolase, C-terminal TIM barrel domain
AL522_RS19395	PF00117	Glutamine amidotransferase class-I
AL522_RS19395	PF06418	CTP synthase N-terminus
AL522_RS19400	PF03819	MazG nucleotide pyrophosphohydrolase domain
AL522_RS19405	PF13291	ACT domain
AL522_RS19405	PF04607	Region found in RelA / SpoT proteins
AL522_RS19405	PF02824	TGS domain
AL522_RS19410	PF05958	tRNA (Uracil-5-)-methyltransferase
AL522_RS19410	PF01938	TRAM domain
AL522_RS19415	PF00672	HAMP domain
AL522_RS19415	PF00072	Response regulator receiver domain
AL522_RS19415	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS19415	PF01627	Hpt domain
AL522_RS19415	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
AL522_RS19415	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS19420	PF02595	Glycerate kinase family
AL522_RS19425	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
AL522_RS19425	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
AL522_RS19430	PF03328	HpcH/HpaI aldolase/citrate lyase family
AL522_RS19435	PF13378	Enolase C-terminal domain-like
AL522_RS19440	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
AL522_RS19440	PF13378	Enolase C-terminal domain-like
AL522_RS19445	PF07690	Major Facilitator Superfamily
AL522_RS19450	PF08666	SAF domain
AL522_RS19450	PF04295	D-galactarate dehydratase / Altronate hydrolase, C terminus
AL522_RS19455	PF00892	EamA-like transporter family
AL522_RS19470	PF02626	Carboxyltransferase domain, subdomain A and B 
AL522_RS19475	PF03746	LamB/YcsF family
AL522_RS19480	PF00155	Aminotransferase class I and II
AL522_RS19485	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS19485	PF03466	LysR substrate binding domain
AL522_RS19495	PF00106	short chain dehydrogenase
AL522_RS19500	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS19505	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS19510	PF00005	ABC transporter
AL522_RS19515	PF00258	Flavodoxin
AL522_RS19520	PF00849	RNA pseudouridylate synthase
AL522_RS19525	PF04287	tRNA pseudouridine synthase C
AL522_RS19530	PF07348	Syd protein (SUKH-2)
AL522_RS19535	PF14819	Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
AL522_RS19535	PF14489	QueF-like protein
AL522_RS19540	PF11892	Domain of unknown function (DUF3412)
AL522_RS19540	PF03641	Possible lysine decarboxylase
AL522_RS19540	PF14793	Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases
AL522_RS19545	PF01367	5'-3' exonuclease, C-terminal SAM fold
AL522_RS19545	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AL522_RS19550	PF18125	RlmM ferredoxin-like domain
AL522_RS19550	PF01728	FtsJ-like methyltransferase
AL522_RS19555	PF04241	Protein of unknown function (DUF423)
AL522_RS19560	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS19560	PF03466	LysR substrate binding domain
AL522_RS19565	PF06004	Bacterial protein of unknown function (DUF903)
AL522_RS19570	PF00266	Aminotransferase class-V
AL522_RS19575	PF02657	Fe-S metabolism associated domain
AL522_RS19580	PF00899	ThiF family
AL522_RS19585	PF06725	3D domain
AL522_RS19585	PF03562	MltA specific insert domain
AL522_RS19605	PF11741	AMIN domain
AL522_RS19605	PF01520	N-acetylmuramoyl-L-alanine amidase
AL522_RS19610	PF00583	Acetyltransferase (GNAT) family
AL522_RS19610	PF00696	Amino acid kinase family
AL522_RS19615	PF13538	UvrD-like helicase C-terminal domain
AL522_RS19620	PF12705	PD-(D/E)XK nuclease superfamily
AL522_RS19620	PF00580	UvrD/REP helicase N-terminal domain
AL522_RS19620	PF13361	UvrD-like helicase C-terminal domain
AL522_RS19625	PF16187	Middle or third domain of peptidase_M16
AL522_RS19625	PF05193	Peptidase M16 inactive domain
AL522_RS19625	PF00675	Insulinase (Peptidase family M16)
AL522_RS19630	PF17946	RecC C-terminal domain
AL522_RS19645	PF07963	Prokaryotic N-terminal methylation motif
AL522_RS19655	PF00303	Thymidylate synthase
AL522_RS19660	PF01790	Prolipoprotein diacylglyceryl transferase
AL522_RS19665	PF05524	PEP-utilising enzyme, N-terminal
AL522_RS19665	PF00391	PEP-utilising enzyme, mobile domain
AL522_RS19665	PF02896	PEP-utilising enzyme, TIM barrel domain
AL522_RS19665	PF01590	GAF domain
AL522_RS19670	PF00293	NUDIX domain
AL522_RS19675	PF02976	DNA mismatch repair enzyme MutH
AL522_RS19680	PF03741	Integral membrane protein TerC family
AL522_RS19685	PF06004	Bacterial protein of unknown function (DUF903)
AL522_RS19690	PF00248	Aldo/keto reductase family
AL522_RS19700	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
AL522_RS19700	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL522_RS19705	PF03466	LysR substrate binding domain
AL522_RS19705	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS19710	PF07690	Major Facilitator Superfamily
AL522_RS19725	PF01336	OB-fold nucleic acid binding domain
AL522_RS19725	PF00152	tRNA synthetases class II (D, K and N) 
AL522_RS19730	PF03462	PCRF domain
AL522_RS19730	PF00472	RF-1 domain
AL522_RS19735	PF17768	RecJ OB domain
AL522_RS19735	PF01368	DHH family
AL522_RS19735	PF02272	DHHA1 domain
AL522_RS19740	PF13098	Thioredoxin-like domain
AL522_RS19740	PF10411	Disulfide bond isomerase protein N-terminus
AL522_RS19745	PF02899	Phage integrase, N-terminal SAM-like domain
AL522_RS19745	PF00589	Phage integrase family
AL522_RS19750	PF00258	Flavodoxin
AL522_RS19760	PF03937	Flavinator of succinate dehydrogenase
AL522_RS19765	PF01571	Aminomethyltransferase folate-binding domain
AL522_RS19770	PF03006	Haemolysin-III related
AL522_RS19775	PF01380	SIS domain
AL522_RS19775	PF01418	Helix-turn-helix domain, rpiR family
AL522_RS19780	PF00232	Glycosyl hydrolase family 1
AL522_RS19790	PF02347	Glycine cleavage system P-protein
AL522_RS19795	PF01597	Glycine cleavage H-protein
AL522_RS19800	PF08669	Glycine cleavage T-protein C-terminal barrel domain
AL522_RS19800	PF01571	Aminomethyltransferase folate-binding domain
AL522_RS19805	PF01494	FAD binding domain
AL522_RS19810	PF01494	FAD binding domain
AL522_RS19815	PF00557	Metallopeptidase family M24
AL522_RS19815	PF05195	Aminopeptidase P, N-terminal domain
AL522_RS19820	PF03695	Uncharacterised protein family (UPF0149)
AL522_RS19825	PF05164	Cell division protein ZapA
AL522_RS19835	PF01812	5-formyltetrahydrofolate cyclo-ligase family
AL522_RS19840	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
AL522_RS19840	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AL522_RS19840	PF01842	ACT domain
AL522_RS19845	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
AL522_RS19850	PF03466	LysR substrate binding domain
AL522_RS19850	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS19855	PF04402	Protein of unknown function (DUF541)
AL522_RS19860	PF01810	LysE type translocator
AL522_RS19865	PF00924	Mechanosensitive ion channel
AL522_RS19865	PF05552	Conserved TM helix
AL522_RS19870	PF01116	Fructose-bisphosphate aldolase class-II
AL522_RS19875	PF00162	Phosphoglycerate kinase
AL522_RS19880	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL522_RS19880	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AL522_RS19885	PF00456	Transketolase, thiamine diphosphate binding domain
AL522_RS19885	PF02780	Transketolase, C-terminal domain
AL522_RS19885	PF02779	Transketolase, pyrimidine binding domain
AL522_RS19890	PF01435	Peptidase family M48
AL522_RS19895	PF06078	Bacterial protein of unknown function (DUF937)
AL522_RS19900	PF00491	Arginase family
AL522_RS19905	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
AL522_RS19905	PF17944	Arginine decarboxylase C-terminal helical extension
AL522_RS19905	PF17810	Arginine decarboxylase helical bundle domain
AL522_RS19915	PF02773	S-adenosylmethionine synthetase, C-terminal domain
AL522_RS19915	PF00438	S-adenosylmethionine synthetase, N-terminal domain
AL522_RS19915	PF02772	S-adenosylmethionine synthetase, central domain
AL522_RS19920	PF00083	Sugar (and other) transporter
AL522_RS19930	PF00534	Glycosyl transferases group 1
AL522_RS19930	PF13439	Glycosyltransferase Family 4
AL522_RS19935	PF17283	SprT-like zinc ribbon domain
AL522_RS19935	PF10263	SprT-like family
AL522_RS19940	PF04231	Endonuclease I
AL522_RS19945	PF04452	RNA methyltransferase
AL522_RS19950	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
AL522_RS19950	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
AL522_RS19955	PF02622	Uncharacterized ACR, COG1678
AL522_RS19960	PF03652	Holliday junction resolvase
AL522_RS19965	PF00437	Type II/IV secretion system protein
AL522_RS19970	PF01168	Alanine racemase, N-terminal domain
AL522_RS19975	PF02325	YGGT family
AL522_RS19980	PF01725	Ham1 family
AL522_RS19985	PF04055	Radical SAM superfamily
AL522_RS19985	PF06969	HemN C-terminal domain
AL522_RS19990	PF11101	Protein of unknown function (DUF2884)
AL522_RS19995	PF04320	Protein with unknown function (DUF469)
AL522_RS20000	PF02390	Putative methyltransferase 
AL522_RS20005	PF14815	NUDIX domain
AL522_RS20005	PF00633	Helix-hairpin-helix motif
AL522_RS20005	PF10576	Iron-sulfur binding domain of endonuclease III
AL522_RS20005	PF00730	HhH-GPD superfamily base excision DNA repair protein
AL522_RS20010	PF04362	Bacterial Fe(2+) trafficking
AL522_RS20015	PF01464	Transglycosylase SLT domain
AL522_RS20015	PF11873	Membrane-bound lytic murein transglycosylase C, N-terminal domain
AL522_RS20020	PF03709	Orn/Lys/Arg decarboxylase, N-terminal domain
AL522_RS20020	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
AL522_RS20020	PF01276	Orn/Lys/Arg decarboxylase, major domain
AL522_RS20025	PF00107	Zinc-binding dehydrogenase
AL522_RS20025	PF08240	Alcohol dehydrogenase GroES-like domain
AL522_RS20030	PF02464	Competence-damaged protein
AL522_RS20035	PF00005	ABC transporter
AL522_RS20040	PF01032	FecCD transport family
AL522_RS20045	PF01497	Periplasmic binding protein
AL522_RS20050	PF05171	Haemin-degrading HemS.ChuX domain
AL522_RS20065	PF03551	Transcriptional regulator PadR-like family
AL522_RS20070	PF08021	Siderophore-interacting FAD-binding domain
AL522_RS20070	PF04954	Siderophore-interacting protein
AL522_RS20080	PF12833	Helix-turn-helix domain
AL522_RS20080	PF06445	GyrI-like small molecule binding domain
AL522_RS20090	PF02322	Cytochrome bd terminal oxidase subunit II
AL522_RS20095	PF01654	Cytochrome bd terminal oxidase subunit I
AL522_RS20100	PF01638	HxlR-like helix-turn-helix
AL522_RS20105	PF05368	NmrA-like family
AL522_RS20110	PF01204	Trehalase
AL522_RS20115	PF05974	Domain of unknown function (DUF892)
AL522_RS20120	PF05974	Domain of unknown function (DUF892)
AL522_RS20125	PF10685	Stress-induced bacterial acidophilic repeat motif
AL522_RS20130	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS20130	PF17152	Periplasmic sensor domain
AL522_RS20140	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL522_RS20140	PF08447	PAS fold
AL522_RS20140	PF13426	PAS domain
AL522_RS20145	PF00905	Penicillin binding protein transpeptidase domain
AL522_RS20145	PF03717	Penicillin-binding Protein dimerisation domain
AL522_RS20150	PF01048	Phosphorylase superfamily
AL522_RS20155	PF01676	Metalloenzyme superfamily
AL522_RS20160	PF00591	Glycosyl transferase family, a/b domain
AL522_RS20160	PF02885	Glycosyl transferase family, helical bundle domain
AL522_RS20160	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
AL522_RS20165	PF01791	DeoC/LacD family aldolase
AL522_RS20170	PF01026	TatD related DNase
AL522_RS20175	PF01734	Patatin-like phospholipase
AL522_RS20180	PF04972	BON domain
AL522_RS20185	PF00009	Elongation factor Tu GTP binding domain
AL522_RS20185	PF16658	Class II release factor RF3, C-terminal domain
AL522_RS20185	PF03144	Elongation factor Tu domain 2
AL522_RS20190	PF01546	Peptidase family M20/M25/M40
AL522_RS20190	PF07687	Peptidase dimerisation domain
AL522_RS20195	PF07670	Nucleoside recognition
AL522_RS20200	PF07670	Nucleoside recognition
AL522_RS20205	PF00210	Ferritin-like domain
AL522_RS20210	PF16338	Domain of unknown function (DUF4968)
AL522_RS20210	PF01055	Glycosyl hydrolases family 31 
AL522_RS20210	PF13802	Galactose mutarotase-like
AL522_RS20210	PF17137	Domain of unknown function (DUF5110)
AL522_RS20215	PF07690	Major Facilitator Superfamily
AL522_RS20225	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS20230	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS20230	PF00563	EAL domain
AL522_RS20230	PF03707	Bacterial signalling protein N terminal repeat
AL522_RS20230	PF13188	PAS domain
AL522_RS20240	PF10777	Inner membrane protein YlaC
AL522_RS20245	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS20245	PF00155	Aminotransferase class I and II
AL522_RS20250	PF03707	Bacterial signalling protein N terminal repeat
AL522_RS20250	PF00563	EAL domain
AL522_RS20250	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS20255	PF03707	Bacterial signalling protein N terminal repeat
AL522_RS20255	PF00563	EAL domain
AL522_RS20255	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS20285	PF07690	Major Facilitator Superfamily
AL522_RS20290	PF02472	Biopolymer transport protein ExbD/TolR
AL522_RS20295	PF01618	MotA/TolQ/ExbB proton channel family
AL522_RS20300	PF03480	Bacterial extracellular solute-binding protein, family 7
AL522_RS20310	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
AL522_RS20315	PF01053	Cys/Met metabolism PLP-dependent enzyme
AL522_RS20320	PF09335	SNARE associated Golgi protein
AL522_RS20325	PF12833	Helix-turn-helix domain
AL522_RS20325	PF06719	AraC-type transcriptional regulator N-terminus
AL522_RS20330	PF00248	Aldo/keto reductase family
AL522_RS20335	PF07732	Multicopper oxidase
AL522_RS20335	PF07731	Multicopper oxidase
AL522_RS20340	PF01553	Acyltransferase
AL522_RS20345	PF00521	DNA gyrase/topoisomerase IV, subunit A
AL522_RS20345	PF03989	DNA gyrase C-terminal domain, beta-propeller
AL522_RS20350	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL522_RS20355	PF02525	Flavodoxin-like fold
AL522_RS20360	PF03992	Antibiotic biosynthesis monooxygenase
AL522_RS20365	PF03466	LysR substrate binding domain
AL522_RS20365	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS20370	PF01751	Toprim domain
AL522_RS20370	PF00986	DNA gyrase B subunit, carboxyl terminus
AL522_RS20370	PF00204	DNA gyrase B
AL522_RS20370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS20375	PF05728	Uncharacterised protein family (UPF0227)
AL522_RS20380	PF00149	Calcineurin-like phosphoesterase
AL522_RS20385	PF06853	Protein of unknown function (DUF1249)
AL522_RS20390	PF00293	NUDIX domain
AL522_RS20395	PF02321	Outer membrane efflux protein
AL522_RS20400	PF06693	Protein of unknown function (DUF1190)
AL522_RS20405	PF03738	Glutathionylspermidine synthase preATP-grasp
AL522_RS20410	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
AL522_RS20415	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AL522_RS20420	PF04380	Membrane fusogenic activity
AL522_RS20425	PF01467	Cytidylyltransferase-like
AL522_RS20425	PF00294	pfkB family carbohydrate kinase
AL522_RS20430	PF03710	Glutamate-ammonia ligase adenylyltransferase
AL522_RS20430	PF08335	GlnD PII-uridylyltransferase
AL522_RS20435	PF01928	CYTH domain
AL522_RS20440	PF08239	Bacterial SH3 domain
AL522_RS20445	PF12627	Probable RNA and SrmB- binding site of polymerase A
AL522_RS20445	PF01966	HD domain
AL522_RS20445	PF01743	Poly A polymerase head domain
AL522_RS20450	PF02673	Bacitracin resistance protein BacA
AL522_RS20455	PF02152	Dihydroneopterin aldolase
AL522_RS20460	PF02660	Glycerol-3-phosphate acyltransferase
AL522_RS20465	PF00814	Glycoprotease family
AL522_RS20470	PF01165	Ribosomal protein S21
AL522_RS20475	PF10410	DnaB-helicase binding domain of primase
AL522_RS20475	PF08278	DNA primase DnaG DnaB-binding 
AL522_RS20475	PF01807	CHC2 zinc finger
AL522_RS20475	PF08275	DNA primase catalytic core, N-terminal domain
AL522_RS20480	PF04545	Sigma-70, region 4
AL522_RS20480	PF00140	Sigma-70 factor, region 1.2
AL522_RS20480	PF03979	Sigma-70 factor, region 1.1
AL522_RS20480	PF04542	Sigma-70 region 2 
AL522_RS20480	PF04546	Sigma-70, non-essential region
AL522_RS20480	PF04539	Sigma-70 region 3
AL522_RS20485	PF03167	Uracil DNA glycosylase superfamily
AL522_RS20530	PF17482	Phage tail sheath C-terminal domain
AL522_RS20530	PF04984	Phage tail sheath protein subtilisin-like domain
AL522_RS20535	PF02413	Caudovirales tail fibre assembly protein, lambda gpK
AL522_RS20540	PF07484	Phage Tail Collar Domain
AL522_RS20655	PF06183	DinI-like family
AL522_RS20665	PF05840	Bacteriophage replication gene A protein (GPA)
AL522_RS20670	PF02086	D12 class N6 adenine-specific DNA methyltransferase
AL522_RS20685	PF17282	Family of unknown function (DUF5347)
AL522_RS20690	PF06892	Phage regulatory protein CII (CP76)
AL522_RS20700	PF07022	Bacteriophage CI repressor helix-turn-helix domain
AL522_RS20700	PF16452	Bacteriophage CI repressor C-terminal domain
AL522_RS20705	PF00589	Phage integrase family
AL522_RS20705	PF02899	Phage integrase, N-terminal SAM-like domain
AL522_RS20715	PF07804	HipA-like C-terminal domain
AL522_RS20725	PF07478	D-ala D-ala ligase C-terminus
AL522_RS20725	PF01820	D-ala D-ala ligase N-terminus
AL522_RS20730	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS20735	PF00916	Sulfate permease family
AL522_RS20735	PF01740	STAS domain
AL522_RS20740	PF00484	Carbonic anhydrase
AL522_RS20745	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
AL522_RS20750	PF02578	Multi-copper polyphenol oxidoreductase laccase
AL522_RS20755	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL522_RS20755	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
AL522_RS20760	PF05175	Methyltransferase small domain
AL522_RS20765	PF01863	Protein of unknown function DUF45
AL522_RS20770	PF00654	Voltage gated chloride channel
AL522_RS20775	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL522_RS20780	PF03741	Integral membrane protein TerC family
AL522_RS20785	PF00375	Sodium:dicarboxylate symporter family
AL522_RS20790	PF08666	SAF domain
AL522_RS20790	PF04295	D-galactarate dehydratase / Altronate hydrolase, C terminus
AL522_RS20795	PF01232	Mannitol dehydrogenase Rossmann domain
AL522_RS20795	PF08125	Mannitol dehydrogenase C-terminal domain
AL522_RS20800	PF02614	Glucuronate isomerase
AL522_RS20805	PF07690	Major Facilitator Superfamily
AL522_RS20810	PF07729	FCD domain
AL522_RS20810	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS20815	PF09335	SNARE associated Golgi protein
AL522_RS20820	PF13721	SecD export protein N-terminal TM region
AL522_RS20825	PF06476	Protein of unknown function (DUF1090)
AL522_RS20830	PF05957	Bacterial protein of unknown function (DUF883)
AL522_RS20835	PF07332	Putative Actinobacterial Holin-X, holin superfamily III
AL522_RS20840	PF13997	YqjK-like protein
AL522_RS20845	PF07681	DoxX
AL522_RS20850	PF13409	Glutathione S-transferase, N-terminal domain
AL522_RS20860	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL522_RS20865	PF04348	LppC putative lipoprotein
AL522_RS20870	PF02021	Uncharacterised protein family UPF0102
AL522_RS20875	PF13580	SIS domain
AL522_RS20880	PF04972	BON domain
AL522_RS20885	PF02678	Pirin
AL522_RS20885	PF17954	Quercetinase C-terminal cupin domain
AL522_RS20890	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS20890	PF03466	LysR substrate binding domain
AL522_RS20895	PF08279	HTH domain
AL522_RS20895	PF05043	Mga helix-turn-helix domain
AL522_RS20895	PF00874	PRD domain
AL522_RS20895	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
AL522_RS20900	PF07071	KDGP aldolase
AL522_RS20905	PF03841	L-seryl-tRNA selenium transferase
AL522_RS20910	PF01979	Amidohydrolase family
AL522_RS20940	PF07361	Cytochrome b562
AL522_RS20945	PF01523	Putative modulator of DNA gyrase
AL522_RS20950	PF04751	Protein of unknown function (DUF615)
AL522_RS20960	PF02875	Mur ligase family, glutamate ligase domain
AL522_RS20960	PF01225	Mur ligase family, catalytic domain
AL522_RS20960	PF08245	Mur ligase middle domain
AL522_RS20965	PF00316	Fructose-1-6-bisphosphatase, N-terminal domain
AL522_RS20970	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL522_RS20970	PF00672	HAMP domain
AL522_RS20970	PF02203	Tar ligand binding domain homologue
AL522_RS20980	PF04284	Protein of unknown function (DUF441)
AL522_RS20985	PF00719	Inorganic pyrophosphatase
AL522_RS20990	PF06094	Gamma-glutamyl cyclotransferase, AIG2-like
AL522_RS20995	PF04357	TamB, inner membrane protein subunit of TAM complex
AL522_RS21000	PF17243	POTRA domain TamA domain 1
AL522_RS21000	PF07244	Surface antigen variable number repeat
AL522_RS21000	PF01103	Surface antigen
AL522_RS21005	PF00571	CBS domain
AL522_RS21005	PF01595	Cyclin M transmembrane N-terminal domain
AL522_RS21005	PF03471	Transporter associated domain
AL522_RS21010	PF06526	Protein of unknown function (DUF1107)
AL522_RS21015	PF09695	Bacterial protein of unknown function (YtfJ_HI0045)
AL522_RS21020	PF00459	Inositol monophosphatase family
AL522_RS21025	PF00149	Calcineurin-like phosphoesterase
AL522_RS21025	PF02872	5'-nucleotidase, C-terminal domain
AL522_RS21030	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL522_RS21030	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL522_RS21035	PF08525	Opacity-associated protein A N-terminal motif
AL522_RS21035	PF04225	Opacity-associated protein A LysM-like domain
AL522_RS21040	PF03948	Ribosomal protein L9, C-terminal domain
AL522_RS21040	PF01281	Ribosomal protein L9, N-terminal domain
AL522_RS21045	PF01084	Ribosomal protein S18
AL522_RS21050	PF00436	Single-strand binding protein family
AL522_RS21055	PF01250	Ribosomal protein S6
AL522_RS21065	PF00326	Prolyl oligopeptidase family
AL522_RS21070	PF00672	HAMP domain
AL522_RS21070	PF02203	Tar ligand binding domain homologue
AL522_RS21070	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
AL522_RS21080	PF18158	Adaptive response protein AidB N-terminal domain
AL522_RS21080	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
AL522_RS21080	PF02770	Acyl-CoA dehydrogenase, middle domain
AL522_RS21085	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AL522_RS21085	PF00588	SpoU rRNA Methylase family
AL522_RS21090	PF08461	Ribonuclease R winged-helix domain
AL522_RS21090	PF17876	Cold shock domain
AL522_RS21090	PF00575	S1 RNA binding domain
AL522_RS21090	PF00773	RNB domain
AL522_RS21090	PF08206	Ribonuclease B OB domain
AL522_RS21095	PF02082	Transcriptional regulator
AL522_RS21100	PF00709	Adenylosuccinate synthetase
AL522_RS21105	PF09838	Uncharacterized protein conserved in bacteria (DUF2065)
AL522_RS21110	PF01145	SPFH domain / Band 7 family
AL522_RS21115	PF01145	SPFH domain / Band 7 family
AL522_RS21115	PF12221	Bacterial membrane protein N terminal
AL522_RS21120	PF16360	GTP-binding GTPase Middle Region
AL522_RS21120	PF13167	GTP-binding GTPase N-terminal
AL522_RS21120	PF01926	50S ribosome-binding GTPase
AL522_RS21125	PF17209	Hfq protein
AL522_RS21135	PF01119	DNA mismatch repair protein, C-terminal domain
AL522_RS21135	PF08676	MutL C terminal dimerisation domain
AL522_RS21140	PF01520	N-acetylmuramoyl-L-alanine amidase
AL522_RS21145	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
AL522_RS21150	PF03853	YjeF-related protein N-terminus
AL522_RS21150	PF01256	Carbohydrate kinase
AL522_RS21155	PF08331	Domain of unknown function (DUF1730)
AL522_RS21175	PF00929	Exonuclease
AL522_RS21180	PF03193	RsgA GTPase
AL522_RS21185	PF02666	Phosphatidylserine decarboxylase
AL522_RS21190	PF00924	Mechanosensitive ion channel
AL522_RS21190	PF12794	Mechanosensitive ion channel inner membrane domain 1
AL522_RS21190	PF12795	Mechanosensitive ion channel porin domain
AL522_RS21195	PF00056	lactate/malate dehydrogenase, NAD binding domain
AL522_RS21195	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AL522_RS21200	PF02863	Arginine repressor, C-terminal domain
AL522_RS21200	PF01316	Arginine repressor, DNA binding domain
AL522_RS21215	PF07338	Protein of unknown function (DUF1471)
AL522_RS21220	PF01337	Barstar (barnase inhibitor)
AL522_RS21225	PF00171	Aldehyde dehydrogenase family
AL522_RS21230	PF04632	Fusaric acid resistance protein family
AL522_RS21235	PF13533	Biotin-lipoyl like
AL522_RS21240	PF07869	Protein of unknown function (DUF1656)
AL522_RS21245	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS21245	PF03466	LysR substrate binding domain
AL522_RS21250	PF01523	Putative modulator of DNA gyrase
AL522_RS21255	PF13116	Protein of unknown function
AL522_RS21255	PF13502	AsmA-like C-terminal region
AL522_RS21260	PF00575	S1 RNA binding domain
AL522_RS21260	PF10150	Ribonuclease E/G family
AL522_RS21265	PF02545	Maf-like protein
AL522_RS21270	PF04093	rod shape-determining protein MreD
AL522_RS21275	PF04085	rod shape-determining protein MreC
AL522_RS21285	PF00563	EAL domain
AL522_RS21285	PF17157	Gammaproteobacterial periplasmic sensor domain
AL522_RS21285	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS21290	PF00174	Oxidoreductase molybdopterin binding domain
AL522_RS21295	PF01794	Ferric reductase like transmembrane component
AL522_RS21300	PF01220	Dehydroquinase class II
AL522_RS21305	PF00364	Biotin-requiring enzyme
AL522_RS21310	PF02785	Biotin carboxylase C-terminal domain
AL522_RS21310	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AL522_RS21310	PF00289	Biotin carboxylase, N-terminal domain
AL522_RS21320	PF00474	Sodium:solute symporter family
AL522_RS21330	PF01207	Dihydrouridine synthase (Dus)
AL522_RS21335	PF02954	Bacterial regulatory protein, Fis family
AL522_RS21340	PF00497	Bacterial extracellular solute-binding proteins, family 3
AL522_RS21345	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS21350	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS21355	PF00005	ABC transporter
AL522_RS21395	PF00132	Bacterial transferase hexapeptide (six repeats)
AL522_RS21400	PF07369	Protein of unknown function (DUF1488)
AL522_RS21405	PF08501	Shikimate dehydrogenase substrate binding domain
AL522_RS21405	PF01488	Shikimate / quinate 5-dehydrogenase
AL522_RS21405	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
AL522_RS21410	PF01300	Telomere recombination
AL522_RS21415	PF01396	Topoisomerase DNA binding C4 zinc finger
AL522_RS21420	PF04361	Protein of unknown function (DUF494)
AL522_RS21425	PF17782	DprA winged helix domain
AL522_RS21425	PF02481	DNA recombination-mediator protein A
AL522_RS21430	PF01327	Polypeptide deformylase
AL522_RS21435	PF02911	Formyl transferase, C-terminal domain
AL522_RS21435	PF00551	Formyl transferase
AL522_RS21440	PF01189	16S rRNA methyltransferase RsmB/F
AL522_RS21440	PF01029	NusB family
AL522_RS21445	PF02080	TrkA-C domain
AL522_RS21445	PF02254	TrkA-N domain
AL522_RS21450	PF01741	Large-conductance mechanosensitive channel, MscL
AL522_RS21455	PF03889	Alternative ribosome-rescue factor A
AL522_RS21460	PF13411	MerR HTH family regulatory protein
AL522_RS21465	PF09350	Domain of unknown function (DUF1992)
AL522_RS21470	PF01196	Ribosomal protein L17
AL522_RS21475	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
AL522_RS21475	PF01000	RNA polymerase Rpb3/RpoA insert domain
AL522_RS21475	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
AL522_RS21480	PF01479	S4 domain
AL522_RS21480	PF00163	Ribosomal protein S4/S9 N-terminal domain
AL522_RS21485	PF00411	Ribosomal protein S11
AL522_RS21490	PF00416	Ribosomal protein S13/S18
AL522_RS21495	PF00344	SecY translocase
AL522_RS21500	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
AL522_RS21505	PF00327	Ribosomal protein L30p/L7e
AL522_RS21510	PF03719	Ribosomal protein S5, C-terminal domain
AL522_RS21510	PF00333	Ribosomal protein S5, N-terminal domain
AL522_RS21515	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
AL522_RS21520	PF00347	Ribosomal protein L6
AL522_RS21525	PF00410	Ribosomal protein S8
AL522_RS21530	PF00253	Ribosomal protein S14p/S29e
AL522_RS21535	PF00281	Ribosomal protein L5
AL522_RS21535	PF00673	ribosomal L5P family C-terminus
AL522_RS21540	PF00467	KOW motif
AL522_RS21540	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
AL522_RS21545	PF00238	Ribosomal protein L14p/L23e
AL522_RS21555	PF00366	Ribosomal protein S17
AL522_RS21560	PF00831	Ribosomal L29 protein
AL522_RS21565	PF00252	Ribosomal protein L16p/L10e
AL522_RS21570	PF07650	KH domain
AL522_RS21570	PF00189	Ribosomal protein S3, C-terminal domain
AL522_RS21575	PF00237	Ribosomal protein L22p/L17e
AL522_RS21580	PF00203	Ribosomal protein S19
AL522_RS21585	PF00181	Ribosomal Proteins L2, RNA binding domain
AL522_RS21585	PF03947	Ribosomal Proteins L2, C-terminal domain
AL522_RS21590	PF00276	Ribosomal protein L23
AL522_RS21595	PF00573	Ribosomal protein L4/L1 family
AL522_RS21600	PF00297	Ribosomal protein L3
AL522_RS21605	PF00338	Ribosomal protein S10p/S20e
AL522_RS21610	PF06750	Bacterial Peptidase A24 N-terminal domain
AL522_RS21610	PF01478	Type IV leader peptidase family
AL522_RS21615	PF00210	Ferritin-like domain
AL522_RS21620	PF04324	BFD-like [2Fe-2S] binding domain
AL522_RS21625	PF03144	Elongation factor Tu domain 2
AL522_RS21625	PF03143	Elongation factor Tu C-terminal domain
AL522_RS21625	PF00009	Elongation factor Tu GTP binding domain
AL522_RS21630	PF00679	Elongation factor G C-terminus
AL522_RS21630	PF14492	Elongation Factor G, domain II
AL522_RS21630	PF03144	Elongation factor Tu domain 2
AL522_RS21630	PF03764	Elongation factor G, domain IV
AL522_RS21630	PF00009	Elongation factor Tu GTP binding domain
AL522_RS21635	PF00177	Ribosomal protein S7p/S5e
AL522_RS21640	PF00164	Ribosomal protein S12/S23
AL522_RS21645	PF04077	DsrH like protein
AL522_RS21650	PF02635	DsrE/DsrF-like family
AL522_RS21655	PF02635	DsrE/DsrF-like family
AL522_RS21660	PF13309	HTH domain
AL522_RS21660	PF08348	YheO-like PAS domain
AL522_RS21665	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL522_RS21665	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
AL522_RS21670	PF04102	SlyX
AL522_RS21675	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AL522_RS21680	PF09526	Probable metal-binding protein (DUF2387)
AL522_RS21685	PF00999	Sodium/hydrogen exchanger family
AL522_RS21685	PF02254	TrkA-N domain
AL522_RS21690	PF02525	Flavodoxin-like fold
AL522_RS21695	PF00005	ABC transporter
AL522_RS21695	PF12848	ABC transporter
AL522_RS21700	PF02668	Taurine catabolism dioxygenase TauD, TfdA family
AL522_RS21705	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS21710	PF00005	ABC transporter
AL522_RS21715	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
AL522_RS21720	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS21725	PF01810	LysE type translocator
AL522_RS21730	PF00561	alpha/beta hydrolase fold
AL522_RS21735	PF06794	Uncharacterised protein family (UPF0270)
AL522_RS21740	PF00485	Phosphoribulokinase / Uridine kinase family
AL522_RS21745	PF02566	OsmC-like protein
AL522_RS21750	PF00027	Cyclic nucleotide-binding domain
AL522_RS21750	PF13545	Crp-like helix-turn-helix domain
AL522_RS21755	PF12805	FUSC-like inner membrane protein yccS
AL522_RS21760	PF00202	Aminotransferase class-III
AL522_RS21765	PF00117	Glutamine amidotransferase class-I
AL522_RS21770	PF02661	Fic/DOC family
AL522_RS21775	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
AL522_RS21780	PF07690	Major Facilitator Superfamily
AL522_RS21785	PF07969	Amidohydrolase family
AL522_RS21790	PF04324	BFD-like [2Fe-2S] binding domain
AL522_RS21790	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
AL522_RS21790	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
AL522_RS21790	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL522_RS21790	PF18267	Rubredoxin NAD+ reductase C-terminal domain
AL522_RS21795	PF13806	Rieske-like [2Fe-2S] domain
AL522_RS21800	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
AL522_RS21800	PF14824	Sirohaem biosynthesis protein central
AL522_RS21800	PF10414	Sirohaem synthase dimerisation region
AL522_RS21805	PF00579	tRNA synthetases class I (W and Y)
AL522_RS21810	PF13419	Haloacid dehalogenase-like hydrolase
AL522_RS21815	PF00834	Ribulose-phosphate 3 epimerase family
AL522_RS21820	PF02086	D12 class N6 adenine-specific DNA methyltransferase
AL522_RS21825	PF05036	Sporulation related domain
AL522_RS21830	PF01761	3-dehydroquinate synthase
AL522_RS21835	PF01202	Shikimate kinase
AL522_RS21845	PF00263	Bacterial type II and III secretion system protein
AL522_RS21845	PF03958	Bacterial type II/III secretion system short domain
AL522_RS21870	PF00905	Penicillin binding protein transpeptidase domain
AL522_RS21870	PF00912	Transglycosylase
AL522_RS21870	PF17092	Penicillin-binding protein OB-like domain
AL522_RS21875	PF00293	NUDIX domain
AL522_RS21880	PF07095	Intracellular growth attenuator protein IgaA
AL522_RS21885	PF13419	Haloacid dehalogenase-like hydrolase
AL522_RS21890	PF01479	S4 domain
AL522_RS21895	PF01430	Hsp33 protein
AL522_RS21900	PF01293	Phosphoenolpyruvate carboxykinase
AL522_RS21905	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS21905	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS21905	PF00672	HAMP domain
AL522_RS21910	PF00072	Response regulator receiver domain
AL522_RS21910	PF00486	Transcriptional regulatory protein, C terminal
AL522_RS21920	PF03449	Transcription elongation factor, N-terminal
AL522_RS21920	PF01272	Transcription elongation factor, GreA/GreB, C-term
AL522_RS21925	PF17674	HHH domain
AL522_RS21925	PF00575	S1 RNA binding domain
AL522_RS21925	PF09371	Tex-like protein N-terminal domain
AL522_RS21925	PF16921	Tex protein YqgF-like domain
AL522_RS21930	PF00128	Alpha amylase, catalytic domain
AL522_RS21940	PF00561	alpha/beta hydrolase fold
AL522_RS21945	PF00156	Phosphoribosyl transferase domain
AL522_RS21950	PF01106	NifU-like domain
AL522_RS21950	PF01521	Iron-sulphur cluster biosynthesis
AL522_RS21955	PF02446	4-alpha-glucanotransferase
AL522_RS21965	PF08220	DeoR-like helix-turn-helix domain
AL522_RS21965	PF00455	DeoR C terminal sensor domain
AL522_RS21970	PF01694	Rhomboid family
AL522_RS21970	PF12122	Cytoplasmic N-terminal domain of rhomboid serine protease
AL522_RS21975	PF00581	Rhodanese-like domain
AL522_RS21980	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
AL522_RS21980	PF01266	FAD dependent oxidoreductase
AL522_RS21985	PF16957	Malonate decarboxylase, alpha subunit, transporter
AL522_RS21990	PF01874	ATP:dephospho-CoA triphosphoribosyl transferase 
AL522_RS21995	PF06857	Malonate decarboxylase delta subunit (MdcD)
AL522_RS22000	PF01039	Carboxyl transferase domain
AL522_RS22010	PF03547	Membrane transport protein
AL522_RS22015	PF10620	Phosphoribosyl-dephospho-CoA transferase MdcG
AL522_RS22020	PF00698	Acyl transferase domain
AL522_RS22025	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS22025	PF03466	LysR substrate binding domain
AL522_RS22030	PF00343	Carbohydrate phosphorylase
AL522_RS22035	PF00534	Glycosyl transferases group 1
AL522_RS22035	PF08323	Starch synthase catalytic domain
AL522_RS22040	PF00483	Nucleotidyl transferase
AL522_RS22045	PF00128	Alpha amylase, catalytic domain
AL522_RS22045	PF18390	Glycogen debranching enzyme C-terminal domain
AL522_RS22045	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL522_RS22050	PF02806	Alpha amylase, C-terminal all-beta domain
AL522_RS22050	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
AL522_RS22050	PF00128	Alpha amylase, catalytic domain
AL522_RS22060	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AL522_RS22060	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AL522_RS22065	PF01914	MarC family integral membrane protein
AL522_RS22080	PF02447	GntP family permease
AL522_RS22085	PF01202	Shikimate kinase
AL522_RS22090	PF00356	Bacterial regulatory proteins, lacI family
AL522_RS22090	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
AL522_RS22095	PF17954	Quercetinase C-terminal cupin domain
AL522_RS22095	PF02678	Pirin
AL522_RS22105	PF00583	Acetyltransferase (GNAT) family
AL522_RS22130	PF03009	Glycerophosphoryl diester phosphodiesterase family
AL522_RS22135	PF00005	ABC transporter
AL522_RS22135	PF17912	MalK OB fold domain
AL522_RS22140	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS22145	PF00528	Binding-protein-dependent transport system inner membrane component
AL522_RS22150	PF13416	Bacterial extracellular solute-binding protein
AL522_RS22155	PF00005	ABC transporter
AL522_RS22160	PF00005	ABC transporter
AL522_RS22160	PF12399	Branched-chain amino acid ATP-binding cassette transporter
AL522_RS22165	PF11862	Domain of unknown function (DUF3382)
AL522_RS22165	PF02653	Branched-chain amino acid transport system / permease component
AL522_RS22170	PF02653	Branched-chain amino acid transport system / permease component
AL522_RS22175	PF13458	Periplasmic binding protein
AL522_RS22180	PF12568	Acetyltransferase (GNAT) domain, PanZ
AL522_RS22185	PF00140	Sigma-70 factor, region 1.2
AL522_RS22185	PF04545	Sigma-70, region 4
AL522_RS22185	PF04542	Sigma-70 region 2 
AL522_RS22190	PF02687	FtsX-like permease family
AL522_RS22190	PF18075	FtsX extracellular domain
AL522_RS22195	PF00005	ABC transporter
AL522_RS22200	PF00448	SRP54-type protein, GTPase domain
AL522_RS22200	PF02881	SRP54-type protein, helical bundle domain
AL522_RS22200	PF02881	SRP54-type protein, helical bundle domain
AL522_RS22200	PF00448	SRP54-type protein, GTPase domain
AL522_RS22210	PF06611	Protein of unknown function (DUF1145)
AL522_RS22220	PF07947	YhhN family
AL522_RS22225	PF00403	Heavy-metal-associated domain
AL522_RS22230	PF01206	Sulfurtransferase TusA
AL522_RS22235	PF02592	Putative vitamin uptake transporter
AL522_RS22240	PF08786	DcrB
AL522_RS22245	PF01261	Xylose isomerase-like TIM barrel
AL522_RS22250	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
AL522_RS22250	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
AL522_RS22255	PF00205	Thiamine pyrophosphate enzyme, central domain
AL522_RS22255	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
AL522_RS22255	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AL522_RS22260	PF00294	pfkB family carbohydrate kinase
AL522_RS22270	PF04962	KduI/IolB family
AL522_RS22275	PF00171	Aldehyde dehydrogenase family
AL522_RS22285	PF07690	Major Facilitator Superfamily
AL522_RS22290	PF01594	AI-2E family transporter
AL522_RS22295	PF07729	FCD domain
AL522_RS22295	PF00392	Bacterial regulatory proteins, gntR family
AL522_RS22300	PF03786	D-mannonate dehydratase (UxuA)
AL522_RS22305	PF00563	EAL domain
AL522_RS22305	PF12792	CSS motif domain associated with EAL 
AL522_RS22310	PF00083	Sugar (and other) transporter
AL522_RS22310	PF08946	Osmosensory transporter coiled coil
AL522_RS22315	PF00490	Delta-aminolevulinic acid dehydratase
AL522_RS22320	PF00990	Diguanylate cyclase, GGDEF domain
AL522_RS22320	PF17155	Gammaproteobacterial periplasmic sensor domain
AL522_RS22325	PF00561	alpha/beta hydrolase fold
AL522_RS22330	PF12833	Helix-turn-helix domain
AL522_RS22335	PF02677	Epoxyqueuosine reductase QueH
AL522_RS22340	PF00083	Sugar (and other) transporter
AL522_RS22365	PF00248	Aldo/keto reductase family
AL522_RS22375	PF01384	Phosphate transporter family
AL522_RS22380	PF10625	Universal stress protein B (UspB)
AL522_RS22390	PF00582	Universal stress protein family
AL522_RS22395	PF04445	Putative SAM-dependent methyltransferase
AL522_RS22400	PF01432	Peptidase family M3
AL522_RS22405	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS22405	PF03466	LysR substrate binding domain
AL522_RS22410	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
AL522_RS22415	PF02441	Flavoprotein
AL522_RS22425	PF04378	Ribosomal RNA large subunit methyltransferase D, RlmJ
AL522_RS22435	PF12706	Beta-lactamase superfamily domain
AL522_RS22440	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AL522_RS22440	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AL522_RS22460	PF07690	Major Facilitator Superfamily
AL522_RS22465	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
AL522_RS22465	PF03466	LysR substrate binding domain
AL522_RS22470	PF03350	Uncharacterized protein family, UPF0114
AL522_RS22475	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AL522_RS22475	PF02702	Osmosensitive K+ channel His kinase sensor domain
AL522_RS22475	PF00512	His Kinase A (phospho-acceptor) domain
AL522_RS22475	PF13493	Domain of unknown function (DUF4118)
AL522_RS22475	PF13492	GAF domain
AL522_RS22480	PF02669	K+-transporting ATPase, c chain
AL522_RS22490	PF03814	Potassium-transporting ATPase A subunit
AL522_RS22495	PF09604	F subunit of K+-transporting ATPase (Potass_KdpF)
