PAJ_RS00005 IPR001048 Aspartate/glutamate/uridylate kinase PAJ_RS00005 IPR001341 Aspartate kinase domain PAJ_RS00005 IPR001342 Homoserine dehydrogenase, catalytic PAJ_RS00005 IPR002912 ACT domain PAJ_RS00005 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding PAJ_RS00005 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I PAJ_RS00005 IPR016040 NAD(P)-binding domain PAJ_RS00005 IPR018042 Aspartate kinase, conserved site PAJ_RS00005 IPR019811 Homoserine dehydrogenase, conserved site PAJ_RS00005 IPR027795 GATS-like ACT domain PAJ_RS00010 IPR000870 Homoserine kinase PAJ_RS00010 IPR006203 GHMP kinase, ATP-binding, conserved site PAJ_RS00010 IPR006204 GHMP kinase N-terminal domain PAJ_RS00010 IPR013750 GHMP kinase, C-terminal domain PAJ_RS00010 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAJ_RS00010 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS00015 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site PAJ_RS00015 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAJ_RS00015 IPR004450 Threonine synthase-like PAJ_RS00015 IPR029144 Threonine synthase, N-terminal PAJ_RS00020 IPR005583 Uncharacterised protein family UPF0246 PAJ_RS00025 IPR001585 Transaldolase PAJ_RS00025 IPR004730 Transaldolase type 1 PAJ_RS00025 IPR013785 Aldolase-type TIM barrel PAJ_RS00025 IPR018225 Transaldolase, active site PAJ_RS00030 IPR001453 Molybdopterin binding domain PAJ_RS00030 IPR008284 Molybdenum cofactor biosynthesis, conserved site PAJ_RS00035 IPR011701 Major facilitator superfamily PAJ_RS00035 IPR020846 Major facilitator superfamily domain PAJ_RS00040 IPR000791 GPR1/FUN34/yaaH PAJ_RS00050 IPR001305 Heat shock protein DnaJ, cysteine-rich domain PAJ_RS00050 IPR001623 DnaJ domain PAJ_RS00050 IPR002939 Chaperone DnaJ, C-terminal PAJ_RS00050 IPR008971 HSP40/DnaJ peptide-binding PAJ_RS00050 IPR012724 Chaperone DnaJ PAJ_RS00050 IPR018253 DnaJ domain, conserved site PAJ_RS00055 IPR004670 Na+/H+ antiporter NhaA PAJ_RS00055 IPR023171 Na/H antiporter domain PAJ_RS00060 IPR002583 Ribosomal protein S20 PAJ_RS00070 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PAJ_RS00070 IPR002300 Aminoacyl-tRNA synthetase, class Ia PAJ_RS00070 IPR002301 Isoleucine-tRNA ligase PAJ_RS00070 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain PAJ_RS00070 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding PAJ_RS00070 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase PAJ_RS00070 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding PAJ_RS00070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS00070 IPR023585 Isoleucine-tRNA ligase, type 1 PAJ_RS00075 IPR001872 Peptidase A8, signal peptidase II PAJ_RS00080 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain PAJ_RS00080 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PAJ_RS00085 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase PAJ_RS00090 IPR000846 Dihydrodipicolinate reductase, N-terminal PAJ_RS00090 IPR016040 NAD(P)-binding domain PAJ_RS00090 IPR022663 Dihydrodipicolinate reductase, C-terminal PAJ_RS00090 IPR022664 Dihydrodipicolinate reductase, conserved site PAJ_RS00090 IPR023940 Dihydrodipicolinate reductase, bacterial PAJ_RS00095 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain PAJ_RS00095 IPR006274 Carbamoyl-phosphate synthase, small subunit PAJ_RS00095 IPR017926 Glutamine amidotransferase PAJ_RS00095 IPR029062 Class I glutamine amidotransferase-like PAJ_RS00100 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain PAJ_RS00100 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain PAJ_RS00100 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain PAJ_RS00100 IPR006275 Carbamoyl-phosphate synthase, large subunit PAJ_RS00100 IPR011607 Methylglyoxal synthase-like domain PAJ_RS00100 IPR013815 ATP-grasp fold, subdomain 1 PAJ_RS00100 IPR013816 ATP-grasp fold, subdomain 2 PAJ_RS00100 IPR016185 Pre-ATP-grasp domain PAJ_RS00110 IPR009977 Mig-14 PAJ_RS00115 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain PAJ_RS00115 IPR016040 NAD(P)-binding domain PAJ_RS00120 IPR000847 Transcription regulator HTH, LysR PAJ_RS00120 IPR005119 LysR, substrate-binding PAJ_RS00120 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS00125 IPR023614 Porin domain PAJ_RS00130 IPR001796 Dihydrofolate reductase domain PAJ_RS00130 IPR012259 Dihydrofolate reductase PAJ_RS00130 IPR024072 Dihydrofolate reductase-like domain PAJ_RS00135 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) PAJ_RS00135 IPR004843 Calcineurin-like phosphoesterase domain, apaH type PAJ_RS00135 IPR029052 Metallo-dependent phosphatase-like PAJ_RS00140 IPR007474 ApaG domain PAJ_RS00140 IPR023065 Uncharacterised protein family ApaG PAJ_RS00145 IPR001737 Ribosomal RNA adenine methylase transferase PAJ_RS00145 IPR011530 Ribosomal RNA adenine dimethylase PAJ_RS00145 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site PAJ_RS00145 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal PAJ_RS00145 IPR023165 rRNA adenine dimethylase-like PAJ_RS00145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS00150 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA PAJ_RS00150 IPR024084 Isopropylmalate dehydrogenase-like domain PAJ_RS00155 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type PAJ_RS00155 IPR008880 Trigger factor, C-terminal domain PAJ_RS00155 IPR015391 SurA N-terminal PAJ_RS00155 IPR023034 Peptidyl-prolyl isomerase SurA PAJ_RS00155 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site PAJ_RS00155 IPR027304 Trigger factor/SurA domain PAJ_RS00160 IPR005653 Organic solvent tolerance-like, N-terminal PAJ_RS00160 IPR007543 Organic solvent tolerance protein, C-terminal PAJ_RS00160 IPR020889 Lipopolysaccharide assembly, LptD PAJ_RS00165 IPR001623 DnaJ domain PAJ_RS00165 IPR007791 Heat shock protein DnaJ-like protein DjlA PAJ_RS00165 IPR023749 DnaJ-like protein DjlA PAJ_RS00165 IPR029024 TerB-like PAJ_RS00170 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F PAJ_RS00170 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PAJ_RS00170 IPR006225 Pseudouridine synthase, RluC/RluD PAJ_RS00170 IPR020103 Pseudouridine synthase, catalytic domain PAJ_RS00175 IPR000330 SNF2-related PAJ_RS00175 IPR001650 Helicase, C-terminal PAJ_RS00175 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS00175 IPR022737 RNA polymerase recycling, bacterial, C-terminal PAJ_RS00175 IPR023949 RNA polymerase-associated protein RapA PAJ_RS00175 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS00180 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain PAJ_RS00180 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain PAJ_RS00180 IPR006172 DNA-directed DNA polymerase, family B PAJ_RS00180 IPR012337 Ribonuclease H-like domain PAJ_RS00180 IPR017964 DNA-directed DNA polymerase, family B, conserved site PAJ_RS00180 IPR023211 DNA polymerase, palm domain PAJ_RS00185 IPR032816 PAJ_RS00185 PAJ_RS00185 IPR032818 PAJ_RS00185 PAJ_RS00190 IPR003439 ABC transporter-like PAJ_RS00190 IPR003593 AAA+ ATPase domain PAJ_RS00190 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ PAJ_RS00190 IPR017871 ABC transporter, conserved site PAJ_RS00190 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS00195 IPR000515 MetI-like domain PAJ_RS00195 IPR005947 Thiamine ABC transporter, permease protein PAJ_RS00200 IPR005948 Thiamine ABC transporter periplasmic binding protein PAJ_RS00200 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein PAJ_RS00200 IPR006061 Bacterial extracellular solute-binding family 1, conserved site PAJ_RS00205 IPR000914 Bacterial extracellular solute-binding protein, family 5 PAJ_RS00205 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS00205 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain PAJ_RS00210 IPR011701 Major facilitator superfamily PAJ_RS00210 IPR020846 Major facilitator superfamily domain PAJ_RS00215 IPR011701 Major facilitator superfamily PAJ_RS00215 IPR020846 Major facilitator superfamily domain PAJ_RS00220 IPR000847 Transcription regulator HTH, LysR PAJ_RS00220 IPR005119 LysR, substrate-binding PAJ_RS00220 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS00225 IPR001381 Dehydroquinase class I PAJ_RS00225 IPR013785 Aldolase-type TIM barrel PAJ_RS00225 IPR018508 3-dehydroquinate dehydratase, active site PAJ_RS00230 IPR005829 Sugar transporter, conserved site PAJ_RS00230 IPR011701 Major facilitator superfamily PAJ_RS00230 IPR020846 Major facilitator superfamily domain PAJ_RS00235 IPR011342 Shikimate dehydrogenase PAJ_RS00235 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal PAJ_RS00235 IPR016040 NAD(P)-binding domain PAJ_RS00235 IPR022893 Shikimate, quinate/shikimate dehydrogenase PAJ_RS00240 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal PAJ_RS00240 IPR013785 Aldolase-type TIM barrel PAJ_RS00240 IPR016040 NAD(P)-binding domain PAJ_RS00240 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS00245 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel PAJ_RS00245 IPR004431 3-isopropylmalate dehydratase, small subunit PAJ_RS00245 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PAJ_RS00245 IPR015937 Aconitase/isopropylmalate dehydratase PAJ_RS00250 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha PAJ_RS00250 IPR004430 3-isopropylmalate dehydratase, large subunit PAJ_RS00250 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 PAJ_RS00250 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 PAJ_RS00250 IPR015937 Aconitase/isopropylmalate dehydratase PAJ_RS00250 IPR018136 Aconitase family, 4Fe-4S cluster binding site PAJ_RS00255 IPR001804 Isocitrate and isopropylmalate dehydrogenases family PAJ_RS00255 IPR004429 Isopropylmalate dehydrogenase PAJ_RS00255 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site PAJ_RS00255 IPR024084 Isopropylmalate dehydrogenase-like domain PAJ_RS00260 IPR000891 Pyruvate carboxyltransferase PAJ_RS00260 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site PAJ_RS00260 IPR005671 2-isopropylmalate synthase, bacterial-type PAJ_RS00260 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain PAJ_RS00260 IPR013785 Aldolase-type TIM barrel PAJ_RS00265 IPR000399 TPP-binding enzyme, conserved site PAJ_RS00265 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding PAJ_RS00265 IPR012000 Thiamine pyrophosphate enzyme, central domain PAJ_RS00265 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain PAJ_RS00265 IPR012846 Acetolactate synthase, large subunit, biosynthetic PAJ_RS00265 IPR029035 DHS-like NAD/FAD-binding domain PAJ_RS00265 IPR029061 Thiamin diphosphate-binding fold PAJ_RS00270 IPR002912 ACT domain PAJ_RS00270 IPR004789 Acetolactate synthase, small subunit PAJ_RS00270 IPR019455 Acetolactate synthase, small subunit, C-terminal PAJ_RS00275 IPR000843 Transcription regulator HTH, LacI PAJ_RS00275 IPR001761 Periplasmic binding protein/LacI sugar binding domain PAJ_RS00275 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS00275 IPR012781 D-fructose-responsive transcription factor PAJ_RS00275 IPR028082 Periplasmic binding protein-like I PAJ_RS00280 IPR003444 MraZ PAJ_RS00280 IPR020603 MraZ domain PAJ_RS00285 IPR002903 Ribosomal RNA small subunit methyltransferase H PAJ_RS00285 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain PAJ_RS00285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS00290 IPR011922 Cell division protein FtsL PAJ_RS00295 IPR001460 Penicillin-binding protein, transpeptidase PAJ_RS00295 IPR005311 Penicillin-binding protein, dimerisation domain PAJ_RS00295 IPR012338 Beta-lactamase/transpeptidase-like PAJ_RS00300 IPR000713 Mur ligase, N-terminal PAJ_RS00300 IPR004101 Mur ligase, C-terminal PAJ_RS00300 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase PAJ_RS00300 IPR013221 Mur ligase, central PAJ_RS00305 IPR000713 Mur ligase, N-terminal PAJ_RS00305 IPR004101 Mur ligase, C-terminal PAJ_RS00305 IPR005863 UDP-MurNAc-pentapeptide synthetase PAJ_RS00305 IPR013221 Mur ligase, central PAJ_RS00310 IPR000715 Glycosyl transferase, family 4 PAJ_RS00310 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase PAJ_RS00310 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site PAJ_RS00315 IPR004101 Mur ligase, C-terminal PAJ_RS00315 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase PAJ_RS00315 IPR013221 Mur ligase, central PAJ_RS00315 IPR016040 NAD(P)-binding domain PAJ_RS00320 IPR001182 Cell cycle protein FtsW/RodA PAJ_RS00320 IPR013437 Cell division protein FtsW PAJ_RS00320 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site PAJ_RS00325 IPR004276 Glycosyl transferase, family 28 PAJ_RS00325 IPR006009 N-acetylglucosaminyltransferase, MurG PAJ_RS00325 IPR007235 Glycosyl transferase, family 28, C-terminal PAJ_RS00330 IPR000713 Mur ligase, N-terminal PAJ_RS00330 IPR004101 Mur ligase, C-terminal PAJ_RS00330 IPR005758 UDP-N-acetylmuramate-alanine ligase PAJ_RS00330 IPR013221 Mur ligase, central PAJ_RS00330 IPR016040 NAD(P)-binding domain PAJ_RS00335 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site PAJ_RS00335 IPR005905 D-alanine--D-alanine ligase PAJ_RS00335 IPR011095 D-alanine--D-alanine ligase, C-terminal PAJ_RS00335 IPR011127 D-alanine--D-alanine ligase, N-terminal domain PAJ_RS00335 IPR013815 ATP-grasp fold, subdomain 1 PAJ_RS00335 IPR013816 ATP-grasp fold, subdomain 2 PAJ_RS00335 IPR016185 Pre-ATP-grasp domain PAJ_RS00340 IPR005548 Cell division protein FtsQ/DivIB PAJ_RS00340 IPR013685 Polypeptide-transport-associated, FtsQ-type PAJ_RS00340 IPR026579 Cell division protein FtsQ PAJ_RS00345 IPR003494 SHS2 domain inserted in FtsA PAJ_RS00345 IPR020823 Cell division protein FtsA PAJ_RS00350 IPR000158 Cell division protein FtsZ PAJ_RS00350 IPR003008 Tubulin/FtsZ, GTPase domain PAJ_RS00350 IPR008280 Tubulin/FtsZ, C-terminal PAJ_RS00350 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain PAJ_RS00350 IPR020805 Cell division protein FtsZ, conserved site PAJ_RS00350 IPR024757 Cell division protein FtsZ, C-terminal PAJ_RS00355 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase PAJ_RS00355 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal PAJ_RS00355 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal PAJ_RS00355 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS00360 IPR009502 Secretion monitor PAJ_RS00365 IPR000185 Protein translocase subunit SecA PAJ_RS00365 IPR004027 SEC-C motif PAJ_RS00365 IPR011115 SecA DEAD-like, N-terminal PAJ_RS00365 IPR011116 SecA Wing/Scaffold PAJ_RS00365 IPR011130 SecA preprotein, cross-linking domain PAJ_RS00365 IPR020937 SecA conserved site PAJ_RS00365 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS00370 IPR000086 NUDIX hydrolase domain PAJ_RS00370 IPR003561 Mutator MutT PAJ_RS00370 IPR015797 NUDIX hydrolase domain-like PAJ_RS00370 IPR020084 NUDIX hydrolase, conserved site PAJ_RS00370 IPR020476 NUDIX hydrolase PAJ_RS00375 IPR005584 DNA gyrase inhibitor YacG PAJ_RS00375 IPR013088 Zinc finger, NHR/GATA-type PAJ_RS00380 IPR009777 Cell division protein ZapD PAJ_RS00380 IPR027462 Z ring-associated protein D, C-terminal domain PAJ_RS00385 IPR001977 Dephospho-CoA kinase PAJ_RS00385 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS00390 IPR001093 IMP dehydrogenase/GMP reductase PAJ_RS00390 IPR005993 Guanosine monophosphate reductase 1 PAJ_RS00390 IPR013785 Aldolase-type TIM barrel PAJ_RS00390 IPR015875 IMP dehydrogenase / GMP reductase, conserved site PAJ_RS00395 IPR001992 Type II secretion system conserved site PAJ_RS00395 IPR003004 GspF/PilC family PAJ_RS00395 IPR018076 Type II secretion system F domain PAJ_RS00400 IPR001482 Type II secretion system protein E PAJ_RS00400 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS00405 IPR001082 Fimbrial protein pilin PAJ_RS00405 IPR012902 Prokaryotic N-terminal methylation site PAJ_RS00410 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal PAJ_RS00410 IPR004393 Nicotinate-nucleotide pyrophosphorylase PAJ_RS00410 IPR013785 Aldolase-type TIM barrel PAJ_RS00410 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal PAJ_RS00410 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD PAJ_RS00415 IPR002502 N-acetylmuramoyl-L-alanine amidase domain PAJ_RS00420 IPR031347 PAJ_RS00420 PAJ_RS00425 IPR006710 Glycoside hydrolase, family 43 PAJ_RS00425 IPR016828 Alpha-L-arabinofuranosidase PAJ_RS00425 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain PAJ_RS00430 IPR001927 Sodium:galactoside symporter PAJ_RS00430 IPR018043 Sodium:galactoside symporter, conserved site PAJ_RS00430 IPR020846 Major facilitator superfamily domain PAJ_RS00435 IPR002293 Amino acid/polyamine transporter I PAJ_RS00435 IPR004840 Amino acid permease, conserved site PAJ_RS00435 IPR004841 Amino acid permease/ SLC12A domain PAJ_RS00440 IPR000524 Transcription regulator HTH, GntR PAJ_RS00440 IPR008920 Transcription regulator FadR/GntR, C-terminal PAJ_RS00440 IPR011711 GntR, C-terminal PAJ_RS00440 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS00445 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type PAJ_RS00445 IPR005474 Transketolase, N-terminal PAJ_RS00445 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II PAJ_RS00445 IPR029061 Thiamin diphosphate-binding fold PAJ_RS00445 IPR033247 PAJ_RS00445 PAJ_RS00450 IPR000089 Biotin/lipoyl attachment PAJ_RS00450 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain PAJ_RS00450 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PAJ_RS00450 IPR004167 E3 binding PAJ_RS00450 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex PAJ_RS00450 IPR011053 Single hybrid motif PAJ_RS00450 IPR023213 Chloramphenicol acetyltransferase-like domain PAJ_RS00455 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PAJ_RS00455 IPR006258 Dihydrolipoamide dehydrogenase PAJ_RS00455 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site PAJ_RS00455 IPR016156 FAD/NAD-linked reductase, dimerisation domain PAJ_RS00455 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS00460 IPR000847 Transcription regulator HTH, LysR PAJ_RS00460 IPR005119 LysR, substrate-binding PAJ_RS00460 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS00465 IPR001395 Aldo/keto reductase PAJ_RS00465 IPR023210 NADP-dependent oxidoreductase domain PAJ_RS00470 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha PAJ_RS00470 IPR004406 Aconitase B, bacterial PAJ_RS00470 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PAJ_RS00470 IPR015929 Aconitase B, N-terminal, bacterial PAJ_RS00470 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 PAJ_RS00470 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 PAJ_RS00470 IPR015933 Aconitase B, HEAT-like, bacterial PAJ_RS00470 IPR015937 Aconitase/isopropylmalate dehydratase PAJ_RS00470 IPR018136 Aconitase family, 4Fe-4S cluster binding site PAJ_RS00475 IPR008249 Uncharacterised protein family UPF0231 PAJ_RS00480 IPR004684 2-keto-3-deoxygluconate permease PAJ_RS00485 IPR010737 Protein of unknown function, DUF1537 PAJ_RS00485 IPR031475 PAJ_RS00485 PAJ_RS00490 IPR003660 HAMP linker domain PAJ_RS00490 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS00490 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS00490 IPR007891 CHASE3 PAJ_RS00495 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase PAJ_RS00500 IPR000073 Alpha/beta hydrolase fold-1 PAJ_RS00500 IPR029058 Alpha/Beta hydrolase fold PAJ_RS00505 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic PAJ_RS00505 IPR009165 S-adenosylmethionine decarboxylase, bacterial PAJ_RS00505 IPR016067 S-adenosylmethionine decarboxylase, core PAJ_RS00510 IPR001045 Spermidine/spermine synthases family PAJ_RS00510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS00510 IPR030373 PAJ_RS00510 PAJ_RS00515 IPR019114 Chaperone lipoprotein, PulS/OutS-like PAJ_RS00520 IPR001117 Multicopper oxidase, type 1 PAJ_RS00520 IPR002355 Multicopper oxidase, copper-binding site PAJ_RS00520 IPR008972 Cupredoxin PAJ_RS00520 IPR011706 Multicopper oxidase, type 2 PAJ_RS00520 IPR011707 Multicopper oxidase, type 3 PAJ_RS00520 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PAJ_RS00525 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme PAJ_RS00525 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS00525 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS00525 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS00530 IPR000836 Phosphoribosyltransferase domain PAJ_RS00530 IPR005904 Hypoxanthine phosphoribosyl transferase PAJ_RS00530 IPR029057 Phosphoribosyltransferase-like PAJ_RS00535 IPR001765 Carbonic anhydrase PAJ_RS00535 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site PAJ_RS00540 IPR003439 ABC transporter-like PAJ_RS00540 IPR003593 AAA+ ATPase domain PAJ_RS00540 IPR017871 ABC transporter, conserved site PAJ_RS00540 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS00545 IPR000412 ABC-2 transporter PAJ_RS00545 IPR013525 ABC-2 type transporter PAJ_RS00550 IPR003190 Aspartate decarboxylase PAJ_RS00550 IPR009010 Aspartate decarboxylase-like domain PAJ_RS00555 IPR003721 Pantoate-beta-alanine ligase PAJ_RS00555 IPR004821 Cytidyltransferase-like domain PAJ_RS00555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS00565 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK PAJ_RS00570 IPR002646 Poly A polymerase, head domain PAJ_RS00570 IPR010206 Poly(A) polymerase I PAJ_RS00570 IPR025866 Polymerase A arginine-rich C-terminal domain PAJ_RS00570 IPR032828 PAJ_RS00570 PAJ_RS00575 IPR000924 Glutamyl/glutaminyl-tRNA synthetase PAJ_RS00575 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS00575 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain PAJ_RS00575 IPR022380 Glutamyl-Q tRNA(Asp) synthetase PAJ_RS00580 IPR000962 Zinc finger, DksA/TraR C4-type PAJ_RS00580 IPR012784 RNA polymerase-binding transcription factor DksA PAJ_RS00580 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PAJ_RS00585 IPR005224 Sugar fermentation stimulation protein PAJ_RS00590 IPR004175 2',5' RNA ligase PAJ_RS00590 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase PAJ_RS00590 IPR014051 Phosphoesterase, HXTX PAJ_RS00595 IPR001650 Helicase, C-terminal PAJ_RS00595 IPR007502 Helicase-associated domain PAJ_RS00595 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type PAJ_RS00595 IPR011545 DEAD/DEAH box helicase domain PAJ_RS00595 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal PAJ_RS00595 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS00595 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS00600 IPR001264 Glycosyl transferase, family 51 PAJ_RS00600 IPR001460 Penicillin-binding protein, transpeptidase PAJ_RS00600 IPR011813 Penicillin-binding protein 1B PAJ_RS00600 IPR012338 Beta-lactamase/transpeptidase-like PAJ_RS00600 IPR023346 Lysozyme-like domain PAJ_RS00600 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS00600 IPR028166 Bifunctional transglycosylase second domain PAJ_RS00600 IPR032730 PAJ_RS00600 PAJ_RS00605 IPR000531 TonB-dependent receptor, beta-barrel PAJ_RS00605 IPR010105 TonB-dependent siderophore receptor PAJ_RS00605 IPR012910 TonB-dependent receptor, plug PAJ_RS00615 IPR002491 ABC transporter periplasmic binding domain PAJ_RS00615 IPR008091 Ferrichrome-binding periplasmic protein PAJ_RS00620 IPR000522 ABC transporter, permease protein PAJ_RS00620 IPR029022 ABC transporter, BtuC-like PAJ_RS00625 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase PAJ_RS00625 IPR005814 Aminotransferase class-III PAJ_RS00625 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS00625 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS00625 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS00630 IPR000361 FeS cluster biogenesis PAJ_RS00630 IPR016092 FeS cluster insertion protein PAJ_RS00630 IPR017870 FeS cluster insertion, C-terminal, conserved site PAJ_RS00630 IPR023063 Iron-sulfur cluster insertion protein ErpA PAJ_RS00640 IPR002491 ABC transporter periplasmic binding domain PAJ_RS00640 IPR023544 ABC transporter, vitamin B12-binding protein PAJ_RS00645 IPR000845 Nucleoside phosphorylase domain PAJ_RS00645 IPR010049 MTA/SAH nucleosidase PAJ_RS00645 IPR018017 Nucleoside phosphorylase PAJ_RS00650 IPR003607 HD/PDEase domain PAJ_RS00650 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase PAJ_RS00650 IPR006674 HD domain PAJ_RS00650 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria PAJ_RS00650 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain PAJ_RS00650 IPR026875 Phosphohydrolase-associated domain PAJ_RS00650 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain PAJ_RS00655 IPR001478 PDZ domain PAJ_RS00655 IPR001940 Peptidase S1C PAJ_RS00655 IPR009003 Trypsin-like cysteine/serine peptidase domain PAJ_RS00655 IPR011782 Peptidase S1C, Do PAJ_RS00660 IPR008599 Putative sugar diacid recognition PAJ_RS00660 IPR009057 Homeodomain-like PAJ_RS00660 IPR025736 PucR C-terminal helix-turn-helix domain PAJ_RS00665 IPR008397 Alginate lyase domain PAJ_RS00665 IPR008929 Chondroitin AC/alginate lyase PAJ_RS00670 IPR020911 Uncharacterised protein family UPF0325 PAJ_RS00675 IPR001451 Bacterial transferase hexapeptide repeat PAJ_RS00675 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family PAJ_RS00675 IPR011004 Trimeric LpxA-like PAJ_RS00675 IPR018357 Hexapeptide transferase, conserved site PAJ_RS00675 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 PAJ_RS00680 IPR002912 ACT domain PAJ_RS00680 IPR002934 Nucleotidyl transferase domain PAJ_RS00680 IPR003607 HD/PDEase domain PAJ_RS00680 IPR006674 HD domain PAJ_RS00680 IPR010043 Protein-PII uridylyltransferase PAJ_RS00680 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase PAJ_RS00685 IPR000994 Peptidase M24, structural domain PAJ_RS00685 IPR001714 Peptidase M24, methionine aminopeptidase PAJ_RS00685 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 PAJ_RS00690 IPR001865 Ribosomal protein S2 PAJ_RS00690 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid PAJ_RS00690 IPR018130 Ribosomal protein S2, conserved site PAJ_RS00690 IPR023591 Ribosomal protein S2, flavodoxin-like domain PAJ_RS00695 IPR001816 Translation elongation factor EFTs/EF1B PAJ_RS00695 IPR009060 UBA-like PAJ_RS00695 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation PAJ_RS00695 IPR018101 Translation elongation factor Ts, conserved site PAJ_RS00700 IPR001048 Aspartate/glutamate/uridylate kinase PAJ_RS00700 IPR011817 Uridylate kinase PAJ_RS00700 IPR015963 Uridylate kinase, bacteria PAJ_RS00705 IPR002661 Ribosome recycling factor PAJ_RS00705 IPR023584 Ribosome recycling factor domain PAJ_RS00710 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase PAJ_RS00710 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal PAJ_RS00710 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal PAJ_RS00710 IPR016040 NAD(P)-binding domain PAJ_RS00710 IPR026877 DXP reductoisomerase C-terminal domain PAJ_RS00715 IPR001441 Decaprenyl diphosphate synthase-like PAJ_RS00715 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site PAJ_RS00720 IPR000374 Phosphatidate cytidylyltransferase PAJ_RS00725 IPR001478 PDZ domain PAJ_RS00725 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase PAJ_RS00725 IPR008915 Peptidase M50 PAJ_RS00730 IPR000184 Bacterial surface antigen (D15) PAJ_RS00730 IPR010827 Surface antigen variable number PAJ_RS00730 IPR023707 Outer membrane protein assembly factor BamA PAJ_RS00735 IPR005632 Chaperone protein Skp PAJ_RS00735 IPR024930 Skp domain PAJ_RS00740 IPR001451 Bacterial transferase hexapeptide repeat PAJ_RS00740 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase PAJ_RS00740 IPR011004 Trimeric LpxA-like PAJ_RS00740 IPR018357 Hexapeptide transferase, conserved site PAJ_RS00740 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region PAJ_RS00745 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ PAJ_RS00745 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ PAJ_RS00745 IPR029069 HotDog domain PAJ_RS00750 IPR001451 Bacterial transferase hexapeptide repeat PAJ_RS00750 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase PAJ_RS00750 IPR011004 Trimeric LpxA-like PAJ_RS00750 IPR018357 Hexapeptide transferase, conserved site PAJ_RS00750 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal PAJ_RS00755 IPR003835 Glycosyl transferase, family 19 PAJ_RS00760 IPR001352 Ribonuclease HII/HIII PAJ_RS00760 IPR012337 Ribonuclease H-like domain PAJ_RS00760 IPR022898 Ribonuclease HII PAJ_RS00760 IPR024567 Ribonuclease HII/HIII domain PAJ_RS00765 IPR003141 Polymerase/histidinol phosphatase, N-terminal PAJ_RS00765 IPR004013 PHP, C-terminal PAJ_RS00765 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type PAJ_RS00765 IPR004805 DNA polymerase III, alpha subunit PAJ_RS00765 IPR011708 Bacterial DNA polymerase III, alpha subunit PAJ_RS00765 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS00765 IPR016195 Polymerase/histidinol phosphatase-like PAJ_RS00765 IPR029460 DNA polymerase, helix-hairpin-helix motif PAJ_RS00770 IPR001095 Acetyl-CoA carboxylase, alpha subunit PAJ_RS00770 IPR029045 ClpP/crotonase-like domain PAJ_RS00775 IPR000310 Orn/Lys/Arg decarboxylase, major domain PAJ_RS00775 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal PAJ_RS00775 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal PAJ_RS00775 IPR011193 Ornithine/lysine/arginine decarboxylase PAJ_RS00775 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS00775 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS00775 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS00780 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAJ_RS00780 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAJ_RS00785 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase PAJ_RS00785 IPR012094 Lysidine-tRNA(Ile) synthetase PAJ_RS00785 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal PAJ_RS00785 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal PAJ_RS00785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS00785 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain PAJ_RS00785 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PAJ_RS00790 IPR009056 Cytochrome c-like domain PAJ_RS00795 IPR009778 Modulator of Rho-dependent transcription termination PAJ_RS00795 IPR023534 Rof/RNase P-like PAJ_RS00800 IPR009624 Uncharacterised protein family UPF0253 PAJ_RS00805 IPR000352 Peptide chain release factor class I/class II PAJ_RS00810 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain PAJ_RS00810 IPR002316 Proline-tRNA ligase, class IIa PAJ_RS00810 IPR004154 Anticodon-binding PAJ_RS00810 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type PAJ_RS00810 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain PAJ_RS00810 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 PAJ_RS00815 IPR023368 Uncharacterised protein family UPF0066, conserved site PAJ_RS00815 IPR023370 TsaA-like domain PAJ_RS00820 IPR030852 PAJ_RS00820 PAJ_RS00825 IPR004872 Lipoprotein NlpA family PAJ_RS00830 IPR000515 MetI-like domain PAJ_RS00835 IPR003439 ABC transporter-like PAJ_RS00835 IPR003593 AAA+ ATPase domain PAJ_RS00835 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria PAJ_RS00835 IPR017871 ABC transporter, conserved site PAJ_RS00835 IPR018449 NIL domain PAJ_RS00835 IPR026253 Methionine import ATP-binding protein MetN PAJ_RS00835 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS00840 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase PAJ_RS00840 IPR006543 Histidinol-phosphate phosphatase PAJ_RS00840 IPR006549 HAD-superfamily hydrolase,subfamily IIIA PAJ_RS00840 IPR023214 HAD-like domain PAJ_RS00870 IPR000847 Transcription regulator HTH, LysR PAJ_RS00870 IPR005119 LysR, substrate-binding PAJ_RS00870 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS00875 IPR005135 Endonuclease/exonuclease/phosphatase PAJ_RS00875 IPR022958 Uncharacterised protein family UPF0294 PAJ_RS00890 IPR013216 Methyltransferase type 11 PAJ_RS00890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS00895 IPR002156 Ribonuclease H domain PAJ_RS00895 IPR012337 Ribonuclease H-like domain PAJ_RS00895 IPR022892 Ribonuclease H PAJ_RS00900 IPR006054 DNA polymerase III, epsilon subunit PAJ_RS00900 IPR006309 DNA polymerase 3, epsilon subunit PAJ_RS00900 IPR012337 Ribonuclease H-like domain PAJ_RS00900 IPR013520 Exonuclease, RNase T/DNA polymerase III PAJ_RS00910 IPR001585 Transaldolase PAJ_RS00910 IPR013785 Aldolase-type TIM barrel PAJ_RS00910 IPR018225 Transaldolase, active site PAJ_RS00915 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin PAJ_RS00920 IPR000524 Transcription regulator HTH, GntR PAJ_RS00920 IPR008920 Transcription regulator FadR/GntR, C-terminal PAJ_RS00920 IPR011711 GntR, C-terminal PAJ_RS00920 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS00925 IPR015942 Asp/Glu/hydantoin racemase PAJ_RS00930 IPR002509 Polysaccharide deacetylase PAJ_RS00930 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel PAJ_RS00930 IPR017625 Putative urate catabolism protein PAJ_RS00935 IPR001303 Class II aldolase/adducin N-terminal PAJ_RS00940 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS00940 IPR018313 Extracellular solute-binding protein, family 3, conserved site PAJ_RS00945 IPR008775 Phytanoyl-CoA dioxygenase PAJ_RS00950 IPR000515 MetI-like domain PAJ_RS00950 IPR003439 ABC transporter-like PAJ_RS00950 IPR003593 AAA+ ATPase domain PAJ_RS00950 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS00950 IPR017871 ABC transporter, conserved site PAJ_RS00950 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS00955 IPR000847 Transcription regulator HTH, LysR PAJ_RS00955 IPR005119 LysR, substrate-binding PAJ_RS00955 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS00960 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS00965 IPR006175 YjgF/Yer057p/UK114 family PAJ_RS00965 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAJ_RS00970 IPR010430 Protein of unknown function DUF1028 PAJ_RS00970 IPR029055 Nucleophile aminohydrolases, N-terminal PAJ_RS00975 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site PAJ_RS00975 IPR002933 Peptidase M20 PAJ_RS00975 IPR010169 Acetylornithine deacetylase (ArgE) PAJ_RS00975 IPR011650 Peptidase M20, dimerisation domain PAJ_RS00985 IPR000847 Transcription regulator HTH, LysR PAJ_RS00985 IPR005119 LysR, substrate-binding PAJ_RS00985 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS00990 IPR024507 Protein of unknown function DUF3225 PAJ_RS00990 IPR032710 PAJ_RS00990 PAJ_RS00995 IPR000120 Amidase PAJ_RS00995 IPR014087 Amidohydrolase, AtzE type PAJ_RS00995 IPR023631 Amidase signature domain PAJ_RS01000 IPR025148 Protein of unknown function DUF4089 PAJ_RS01005 IPR000101 Gamma-glutamyltranspeptidase PAJ_RS01005 IPR029055 Nucleophile aminohydrolases, N-terminal PAJ_RS01010 IPR000281 Helix-turn-helix protein RpiR PAJ_RS01010 IPR001347 Sugar isomerase (SIS) PAJ_RS01010 IPR009057 Homeodomain-like PAJ_RS01010 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS01015 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS01015 IPR018313 Extracellular solute-binding protein, family 3, conserved site PAJ_RS01020 IPR000515 MetI-like domain PAJ_RS01020 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS01025 IPR000515 MetI-like domain PAJ_RS01025 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS01030 IPR003439 ABC transporter-like PAJ_RS01030 IPR003593 AAA+ ATPase domain PAJ_RS01030 IPR017871 ABC transporter, conserved site PAJ_RS01030 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS01030 IPR030679 PAJ_RS01030 PAJ_RS01035 IPR000192 Aminotransferase class V domain PAJ_RS01035 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS01035 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS01035 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS01035 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase PAJ_RS01040 IPR002933 Peptidase M20 PAJ_RS01040 IPR010158 Amidase, hydantoinase/carbamoylase PAJ_RS01040 IPR011650 Peptidase M20, dimerisation domain PAJ_RS01045 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 PAJ_RS01045 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase PAJ_RS01050 IPR000895 Transthyretin/hydroxyisourate hydrolase PAJ_RS01050 IPR014306 Hydroxyisourate hydrolase PAJ_RS01050 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily PAJ_RS01055 IPR000763 Catalase-peroxidase haem PAJ_RS01055 IPR002016 Haem peroxidase, plant/fungal/bacterial PAJ_RS01055 IPR010255 Haem peroxidase PAJ_RS01060 IPR001110 Uncharacterised protein family UPF0012, conserved site PAJ_RS01060 IPR003010 Carbon-nitrogen hydrolase PAJ_RS01065 IPR004839 Aminotransferase, class I/classII PAJ_RS01065 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS01065 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS01065 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS01070 IPR001303 Class II aldolase/adducin N-terminal PAJ_RS01070 IPR017714 Methylthioribulose-1-phosphate dehydratase PAJ_RS01075 IPR006439 HAD hydrolase, subfamily IA PAJ_RS01075 IPR023214 HAD-like domain PAJ_RS01075 IPR023943 Enolase-phosphatase E1 PAJ_RS01080 IPR004313 Acireductone dioxygenase ARD family PAJ_RS01080 IPR011051 RmlC-like cupin domain PAJ_RS01080 IPR014710 RmlC-like jelly roll fold PAJ_RS01080 IPR023956 Acireductone dioxygenase ARD PAJ_RS01085 IPR000649 Initiation factor 2B-related PAJ_RS01085 IPR005251 Methylthioribose-1-phosphate isomerase PAJ_RS01085 IPR011559 Initiation factor 2B alpha/beta/delta PAJ_RS01085 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain PAJ_RS01090 IPR002575 Aminoglycoside phosphotransferase PAJ_RS01090 IPR009212 Methylthioribose kinase PAJ_RS01090 IPR011009 Protein kinase-like domain PAJ_RS01095 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PAJ_RS01095 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PAJ_RS01095 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain PAJ_RS01095 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PAJ_RS01095 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type PAJ_RS01100 IPR001347 Sugar isomerase (SIS) PAJ_RS01100 IPR004515 Phosphoheptose isomerase PAJ_RS01105 IPR026869 Putative glutamine amidotransferase type 2 PAJ_RS01105 IPR029055 Nucleophile aminohydrolases, N-terminal PAJ_RS01110 IPR005490 L,D-transpeptidase catalytic domain PAJ_RS01115 IPR001126 DNA-repair protein, UmuC-like PAJ_RS01115 IPR017961 DNA polymerase, Y-family, little finger domain PAJ_RS01115 IPR022880 DNA polymerase IV PAJ_RS01125 IPR025997 Periplasmic binding protein domain PAJ_RS01125 IPR028082 Periplasmic binding protein-like I PAJ_RS01130 IPR001851 ABC transporter, permease PAJ_RS01135 IPR003439 ABC transporter-like PAJ_RS01135 IPR003593 AAA+ ATPase domain PAJ_RS01135 IPR017871 ABC transporter, conserved site PAJ_RS01135 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS01140 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site PAJ_RS01140 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAJ_RS01145 IPR003462 Ornithine cyclodeaminase/mu-crystallin PAJ_RS01145 IPR016040 NAD(P)-binding domain PAJ_RS01145 IPR023401 Ornithine cyclodeaminase, N-terminal PAJ_RS01150 IPR001160 Peptidase M20C, Xaa-His dipeptidase PAJ_RS01150 IPR002933 Peptidase M20 PAJ_RS01150 IPR011650 Peptidase M20, dimerisation domain PAJ_RS01155 IPR000836 Phosphoribosyltransferase domain PAJ_RS01155 IPR023747 Xanthine-guanine phosphoribosyltransferase PAJ_RS01155 IPR029057 Phosphoribosyltransferase-like PAJ_RS01160 IPR010520 Protein of unknown function DUF1100, hydrolase-like PAJ_RS01160 IPR029058 Alpha/Beta hydrolase fold PAJ_RS01165 IPR009986 Sigma factor-binding protein Crl PAJ_RS01170 IPR001702 Porin, Gram-negative type PAJ_RS01170 IPR001897 Porin, gammaproteobacterial PAJ_RS01170 IPR013793 Porin, Gram-negative type, conserved site PAJ_RS01170 IPR023614 Porin domain PAJ_RS01175 IPR001048 Aspartate/glutamate/uridylate kinase PAJ_RS01175 IPR001057 Glutamate/acetylglutamate kinase PAJ_RS01175 IPR002478 PUA domain PAJ_RS01175 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase PAJ_RS01175 IPR011529 Glutamate 5-kinase PAJ_RS01175 IPR015947 PUA-like domain PAJ_RS01175 IPR019797 Glutamate 5-kinase, conserved site PAJ_RS01180 IPR000965 Gamma-glutamyl phosphate reductase GPR PAJ_RS01180 IPR012134 Glutamate-5-semialdehyde dehydrogenase PAJ_RS01180 IPR015590 Aldehyde dehydrogenase domain PAJ_RS01180 IPR016161 Aldehyde/histidinol dehydrogenase PAJ_RS01180 IPR016162 Aldehyde dehydrogenase, N-terminal PAJ_RS01180 IPR016163 Aldehyde dehydrogenase, C-terminal PAJ_RS01180 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site PAJ_RS01185 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS01185 IPR015927 Peptidase S24/S26A/S26B/S26C PAJ_RS01185 IPR019759 Peptidase S24/S26A/S26B PAJ_RS01185 IPR028360 Peptidase S24/S26, beta-ribbon domain PAJ_RS01195 IPR023346 Lysozyme-like domain PAJ_RS01195 IPR023347 Lysozyme domain PAJ_RS01210 IPR011050 Pectin lyase fold/virulence factor PAJ_RS01210 IPR012334 Pectin lyase fold PAJ_RS01210 IPR024535 PAJ_RS01210 PAJ_RS01215 IPR006443 Formate dehydrogenase, alpha subunit, anaerobic PAJ_RS01215 IPR006656 Molybdopterin oxidoreductase PAJ_RS01215 IPR006657 Molydopterin dinucleotide-binding domain PAJ_RS01215 IPR009010 Aspartate decarboxylase-like domain PAJ_RS01220 IPR006470 Formate dehydrogenase, beta subunit PAJ_RS01220 IPR014603 Formate dehydrogenase, iron-sulphur subunit PAJ_RS01220 IPR015246 Formate dehydrogenase, transmembrane PAJ_RS01220 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAJ_RS01220 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAJ_RS01225 IPR006471 Formate dehydrogenase, gamma subunit PAJ_RS01225 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase PAJ_RS01225 IPR016174 Di-haem cytochrome, transmembrane PAJ_RS01235 IPR007803 Arginine/Asparagine/Proline hydroxylase PAJ_RS01235 IPR027443 Isopenicillin N synthase-like PAJ_RS01240 IPR000014 PAS domain PAJ_RS01240 IPR002078 RNA polymerase sigma factor 54 interaction domain PAJ_RS01240 IPR002197 DNA binding HTH domain, Fis-type PAJ_RS01240 IPR003593 AAA+ ATPase domain PAJ_RS01240 IPR009057 Homeodomain-like PAJ_RS01240 IPR013767 PAS fold PAJ_RS01240 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAJ_RS01240 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAJ_RS01240 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS01245 IPR001670 Alcohol dehydrogenase, iron-type PAJ_RS01245 IPR018211 Alcohol dehydrogenase, iron-type, conserved site PAJ_RS01250 IPR004006 Dak kinase PAJ_RS01250 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 PAJ_RS01255 IPR004007 DhaL domain PAJ_RS01255 IPR012737 Dihydroxyacetone kinase, subunit L PAJ_RS01260 IPR000032 Phosphocarrier HPr protein-like PAJ_RS01260 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PAJ_RS01260 IPR004701 Phosphotransferase system, mannose-type IIA component PAJ_RS01260 IPR008279 PEP-utilising enzyme, mobile domain PAJ_RS01260 IPR008731 Phosphotransferase system, enzyme I N-terminal PAJ_RS01260 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain PAJ_RS01265 IPR005565 Haemolysin activator HlyB PAJ_RS01265 IPR013686 Polypeptide-transport-associated, ShlB-type PAJ_RS01265 IPR027282 Two partner secretion pathway transporter PAJ_RS01270 IPR006914 VENN motif-containing domain PAJ_RS01270 IPR008638 Filamentous haemagglutinin, N-terminal PAJ_RS01270 IPR011050 Pectin lyase fold/virulence factor PAJ_RS01270 IPR012334 Pectin lyase fold PAJ_RS01270 IPR025157 Haemagluttinin repeat PAJ_RS01280 IPR006914 VENN motif-containing domain PAJ_RS01285 IPR016630 Uncharacterised conserved protein UCP015278 PAJ_RS01300 IPR000847 Transcription regulator HTH, LysR PAJ_RS01300 IPR005119 LysR, substrate-binding PAJ_RS01300 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS01305 IPR003680 Flavodoxin-like fold PAJ_RS01305 IPR029039 Flavoprotein-like PAJ_RS01310 IPR002059 Cold-shock protein, DNA-binding PAJ_RS01310 IPR011129 Cold shock protein PAJ_RS01310 IPR012156 Cold shock, CspA PAJ_RS01310 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS01310 IPR019844 Cold-shock conserved site PAJ_RS01315 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS01315 IPR002545 CheW-like protein PAJ_RS01315 IPR011006 CheY-like superfamily PAJ_RS01315 IPR024181 Chemotaxis response regulator CheV PAJ_RS01320 IPR005220 Viral OB-fold, YgiW PAJ_RS01325 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site PAJ_RS01325 IPR001650 Helicase, C-terminal PAJ_RS01325 IPR005580 DbpA, RNA-binding PAJ_RS01325 IPR011545 DEAD/DEAH box helicase domain PAJ_RS01325 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS01325 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS01325 IPR028619 ATP-dependent RNA helicase DbpA PAJ_RS01335 IPR011059 Metal-dependent hydrolase, composite domain PAJ_RS01335 IPR013108 Amidohydrolase 3 PAJ_RS01335 IPR032466 PAJ_RS01335 PAJ_RS01340 IPR000847 Transcription regulator HTH, LysR PAJ_RS01340 IPR005119 LysR, substrate-binding PAJ_RS01340 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS01345 IPR011701 Major facilitator superfamily PAJ_RS01345 IPR020846 Major facilitator superfamily domain PAJ_RS01350 IPR003804 L-lactate permease PAJ_RS01355 IPR000524 Transcription regulator HTH, GntR PAJ_RS01355 IPR008920 Transcription regulator FadR/GntR, C-terminal PAJ_RS01355 IPR011711 GntR, C-terminal PAJ_RS01355 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS01360 IPR000262 FMN-dependent dehydrogenase PAJ_RS01360 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site PAJ_RS01360 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent PAJ_RS01360 IPR013785 Aldolase-type TIM barrel PAJ_RS01360 IPR020920 L-lactate dehydrogenase, bacterial PAJ_RS01365 IPR003718 OsmC/Ohr family PAJ_RS01365 IPR015946 K homology domain-like, alpha/beta PAJ_RS01365 IPR019904 Peroxiredoxin OsmC PAJ_RS01380 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PAJ_RS01385 IPR003352 Phosphotransferase system, EIIC PAJ_RS01385 IPR004501 Phosphotransferase system, EIIC component, type 3 PAJ_RS01385 IPR004796 Phosphotransferase system, cellobiose-type IIC component PAJ_RS01390 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit PAJ_RS01395 IPR001360 Glycoside hydrolase, family 1 PAJ_RS01395 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS01395 IPR017853 Glycoside hydrolase, superfamily PAJ_RS01395 IPR018120 Glycoside hydrolase, family 1, active site PAJ_RS01395 IPR033132 PAJ_RS01395 PAJ_RS01400 IPR000843 Transcription regulator HTH, LacI PAJ_RS01400 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS01400 IPR028082 Periplasmic binding protein-like I PAJ_RS01405 IPR003675 CAAX amino terminal protease PAJ_RS01410 IPR021719 Proteinase inhibitor I78 PAJ_RS01420 IPR024753 Regulatory protein AriR PAJ_RS01430 IPR019732 Sigma-S stabilisation anti-adaptor protein PAJ_RS01435 IPR011690 Phosphate-starvation-induced PsiF repeat PAJ_RS01440 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PAJ_RS01440 IPR016156 FAD/NAD-linked reductase, dimerisation domain PAJ_RS01440 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PAJ_RS01440 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS01445 IPR000304 Pyrroline-5-carboxylate reductase PAJ_RS01445 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS01445 IPR016040 NAD(P)-binding domain PAJ_RS01445 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PAJ_RS01445 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain PAJ_RS01450 IPR003791 Protein of unknown function UPF0178 PAJ_RS01455 IPR018648 Protein of unknown function DUF2076 PAJ_RS01460 IPR000623 Shikimate kinase/Threonine synthase-like 1 PAJ_RS01460 IPR023000 Shikimate kinase, conserved site PAJ_RS01460 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS01460 IPR031322 PAJ_RS01460 PAJ_RS01465 IPR032303 PAJ_RS01465 PAJ_RS01470 IPR009664 Protein of unknown function DUF1255 PAJ_RS01470 IPR011051 RmlC-like cupin domain PAJ_RS01470 IPR014710 RmlC-like jelly roll fold PAJ_RS01475 IPR007476 Putative exonuclease, RdgC PAJ_RS01480 IPR000600 ROK PAJ_RS01485 IPR014161 Tol-Pal system, TolA PAJ_RS01490 IPR027050 Nuclease SbcCD subunit C PAJ_RS01490 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS01495 IPR004593 Nuclease SbcCD subunit D PAJ_RS01495 IPR004843 Calcineurin-like phosphoesterase domain, apaH type PAJ_RS01495 IPR026843 Nuclease SbcCD subunit D, C-terminal domain PAJ_RS01495 IPR029052 Metallo-dependent phosphatase-like PAJ_RS01500 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS01500 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS01500 IPR011006 CheY-like superfamily PAJ_RS01500 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB PAJ_RS01500 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS01500 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS01505 IPR000014 PAS domain PAJ_RS01505 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS01505 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS01505 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS01505 IPR013767 PAS fold PAJ_RS01505 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR PAJ_RS01505 IPR021766 Protein of unknown function DUF3329 PAJ_RS01510 IPR024370 PBP domain PAJ_RS01515 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal PAJ_RS01520 IPR004685 Branched-chain amino acid transport system II carrier protein PAJ_RS01525 IPR002293 Amino acid/polyamine transporter I PAJ_RS01525 IPR004840 Amino acid permease, conserved site PAJ_RS01525 IPR004841 Amino acid permease/ SLC12A domain PAJ_RS01535 IPR000560 Histidine phosphatase superfamily, clade-2 PAJ_RS01535 IPR029033 Histidine phosphatase superfamily PAJ_RS01535 IPR033379 PAJ_RS01535 PAJ_RS01540 IPR000760 Inositol monophosphatase PAJ_RS01540 IPR020583 Inositol monophosphatase, metal-binding site PAJ_RS01545 IPR007431 Acyl carrier protein phosphodiesterase PAJ_RS01550 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA PAJ_RS01555 IPR002616 tRNA-guanine(15) transglycosylase-like PAJ_RS01555 IPR004803 Queuine tRNA-ribosyltransferase PAJ_RS01560 IPR003849 Preprotein translocase YajC PAJ_RS01565 IPR005791 Protein translocase subunit SecD PAJ_RS01565 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PAJ_RS01565 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PAJ_RS01565 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PAJ_RS01565 IPR027398 SecD export protein N-terminal TM domain PAJ_RS01570 IPR005665 Protein-export membrane protein SecF, bacterial PAJ_RS01570 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PAJ_RS01570 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PAJ_RS01570 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PAJ_RS01575 IPR021658 Domain of unknown function DUF3251 PAJ_RS01580 IPR003796 Ribonucleotide reductase regulator NrdR-like PAJ_RS01580 IPR005144 ATP-cone PAJ_RS01585 IPR002125 CMP/dCMP deaminase, zinc-binding PAJ_RS01585 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal PAJ_RS01585 IPR004794 Riboflavin biosynthesis protein RibD PAJ_RS01585 IPR011549 Riboflavin-specific deaminase, C-terminal PAJ_RS01585 IPR016192 APOBEC/CMP deaminase, zinc-binding PAJ_RS01585 IPR016193 Cytidine deaminase-like PAJ_RS01585 IPR024072 Dihydrofolate reductase-like domain PAJ_RS01590 IPR002180 6,7-dimethyl-8-ribityllumazine synthase PAJ_RS01595 IPR006027 NusB/RsmB/TIM44 PAJ_RS01595 IPR011605 NusB antitermination factor PAJ_RS01600 IPR006283 Thiamine-monophosphate kinase PAJ_RS01600 IPR010918 AIR synthase-related protein, C-terminal domain PAJ_RS01600 IPR016188 PurM, N-terminal-like PAJ_RS01605 IPR007686 YutG/PgpA domain PAJ_RS01605 IPR026037 Phosphatidylglycerophosphatase A PAJ_RS01605 IPR027416 YutG-like domain PAJ_RS01610 IPR001395 Aldo/keto reductase PAJ_RS01610 IPR020471 Aldo/keto reductase subgroup PAJ_RS01610 IPR023210 NADP-dependent oxidoreductase domain PAJ_RS01615 IPR005474 Transketolase, N-terminal PAJ_RS01615 IPR005475 Transketolase-like, pyrimidine-binding domain PAJ_RS01615 IPR005477 Deoxyxylulose-5-phosphate synthase PAJ_RS01615 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II PAJ_RS01615 IPR020826 Transketolase binding site PAJ_RS01615 IPR029061 Thiamin diphosphate-binding fold PAJ_RS01615 IPR033247 PAJ_RS01615 PAJ_RS01615 IPR033248 PAJ_RS01615 PAJ_RS01620 IPR000092 Polyprenyl synthetase PAJ_RS01620 IPR008949 Terpenoid synthase PAJ_RS01620 IPR017446 Polyprenyl synthetase-related PAJ_RS01625 IPR003761 Exonuclease VII, small subunit PAJ_RS01630 IPR001763 Rhodanese-like domain PAJ_RS01630 IPR003720 tRNA sulfurtransferase ThiI PAJ_RS01630 IPR004114 THUMP PAJ_RS01630 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS01630 IPR020536 Thil, AANH domain PAJ_RS01630 IPR026340 Thiazole biosynthesis domain PAJ_RS01635 IPR002818 ThiJ/PfpI PAJ_RS01635 IPR006287 DJ-1 PAJ_RS01635 IPR029062 Class I glutamine amidotransferase-like PAJ_RS01640 IPR003710 Ketopantoate reductase ApbA/PanE PAJ_RS01640 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS01640 IPR013328 Dehydrogenase, multihelical PAJ_RS01640 IPR013332 Ketopantoate reductase, N-terminal domain PAJ_RS01640 IPR013752 Ketopantoate reductase, C-terminal domain PAJ_RS01640 IPR016040 NAD(P)-binding domain PAJ_RS01645 IPR007551 Protein of unknown function DUF520 PAJ_RS01650 IPR002078 RNA polymerase sigma factor 54 interaction domain PAJ_RS01650 IPR002197 DNA binding HTH domain, Fis-type PAJ_RS01650 IPR003593 AAA+ ATPase domain PAJ_RS01650 IPR009057 Homeodomain-like PAJ_RS01650 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS01650 IPR029016 GAF domain-like PAJ_RS01655 IPR015590 Aldehyde dehydrogenase domain PAJ_RS01655 IPR016160 Aldehyde dehydrogenase, cysteine active site PAJ_RS01655 IPR016161 Aldehyde/histidinol dehydrogenase PAJ_RS01655 IPR016162 Aldehyde dehydrogenase, N-terminal PAJ_RS01655 IPR016163 Aldehyde dehydrogenase, C-terminal PAJ_RS01655 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PAJ_RS01660 IPR002085 Alcohol dehydrogenase superfamily, zinc-type PAJ_RS01660 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PAJ_RS01660 IPR011032 GroES (chaperonin 10)-like PAJ_RS01660 IPR013149 Alcohol dehydrogenase, C-terminal PAJ_RS01660 IPR013154 Alcohol dehydrogenase GroES-like PAJ_RS01660 IPR016040 NAD(P)-binding domain PAJ_RS01660 IPR020843 Polyketide synthase, enoylreductase PAJ_RS01665 IPR011701 Major facilitator superfamily PAJ_RS01665 IPR020846 Major facilitator superfamily domain PAJ_RS01670 IPR000537 UbiA prenyltransferase family PAJ_RS01670 IPR006369 Protohaem IX farnesyltransferase PAJ_RS01670 IPR030470 PAJ_RS01670 PAJ_RS01675 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes PAJ_RS01675 IPR014210 Cytochrome o ubiquinol oxidase subunit IV PAJ_RS01680 IPR000298 Cytochrome c oxidase subunit III domain PAJ_RS01680 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle PAJ_RS01680 IPR014206 Cytochrome o ubiquinol oxidase, subunit III PAJ_RS01680 IPR024791 Cytochrome c oxidase subunit III PAJ_RS01685 IPR000883 Cytochrome c oxidase subunit I PAJ_RS01685 IPR014207 Cytochrome o ubiquinol oxidase, subunit I PAJ_RS01685 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site PAJ_RS01685 IPR023616 Cytochrome c oxidase, subunit I domain PAJ_RS01690 IPR002429 Cytochrome c oxidase subunit II C-terminal PAJ_RS01690 IPR006333 Cytochrome o ubiquinol oxidase subunit II PAJ_RS01690 IPR008972 Cupredoxin PAJ_RS01690 IPR010514 COX aromatic rich motif PAJ_RS01690 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain PAJ_RS01695 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 PAJ_RS01695 IPR011701 Major facilitator superfamily PAJ_RS01695 IPR020846 Major facilitator superfamily domain PAJ_RS01700 IPR005619 Uncharacterised protein family, YajG PAJ_RS01705 IPR002634 BolA protein PAJ_RS01710 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain PAJ_RS01710 IPR005215 Trigger factor PAJ_RS01710 IPR008880 Trigger factor, C-terminal domain PAJ_RS01710 IPR008881 Trigger factor, ribosome-binding, bacterial PAJ_RS01710 IPR027304 Trigger factor/SurA domain PAJ_RS01715 IPR001907 ATP-dependent Clp protease proteolytic subunit PAJ_RS01715 IPR018215 ClpP, active site PAJ_RS01715 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PAJ_RS01715 IPR029045 ClpP/crotonase-like domain PAJ_RS01715 IPR033135 PAJ_RS01715 PAJ_RS01720 IPR003593 AAA+ ATPase domain PAJ_RS01720 IPR003959 ATPase, AAA-type, core PAJ_RS01720 IPR004487 Clp protease, ATP-binding subunit ClpX PAJ_RS01720 IPR010603 Zinc finger, ClpX C4-type PAJ_RS01720 IPR019489 Clp ATPase, C-terminal PAJ_RS01720 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS01725 IPR003111 Peptidase S16, lon N-terminal PAJ_RS01725 IPR003593 AAA+ ATPase domain PAJ_RS01725 IPR003959 ATPase, AAA-type, core PAJ_RS01725 IPR004815 Lon protease, bacterial/eukaryotic-type PAJ_RS01725 IPR008268 Peptidase S16, active site PAJ_RS01725 IPR008269 Peptidase S16, Lon C-terminal PAJ_RS01725 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAJ_RS01725 IPR015947 PUA-like domain PAJ_RS01725 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS01725 IPR027065 Lon protease PAJ_RS01725 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS01725 IPR027543 Lon protease, bacterial PAJ_RS01730 IPR000119 Histone-like bacterial DNA-binding protein PAJ_RS01730 IPR010992 Integration host factor (IHF)-like DNA-binding domain PAJ_RS01730 IPR020816 Histone-like DNA-binding protein, conserved site PAJ_RS01740 IPR004509 Competence protein ComEA, helix-hairpin-helix domain PAJ_RS01740 IPR010994 RuvA domain 2-like PAJ_RS01745 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family PAJ_RS01745 IPR029069 HotDog domain PAJ_RS01750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS01750 IPR018317 Queuosine biosynthesis protein QueC PAJ_RS01755 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAJ_RS01760 IPR000485 AsnC-type HTH domain PAJ_RS01760 IPR011008 Dimeric alpha-beta barrel PAJ_RS01760 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS01760 IPR019887 Transcription regulator AsnC-type, C-terminal PAJ_RS01760 IPR019888 Transcription regulator AsnC-type PAJ_RS01765 IPR003439 ABC transporter-like PAJ_RS01765 IPR003593 AAA+ ATPase domain PAJ_RS01765 IPR011527 ABC transporter type 1, transmembrane domain PAJ_RS01765 IPR017871 ABC transporter, conserved site PAJ_RS01765 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS01770 IPR003439 ABC transporter-like PAJ_RS01770 IPR003593 AAA+ ATPase domain PAJ_RS01770 IPR011527 ABC transporter type 1, transmembrane domain PAJ_RS01770 IPR017871 ABC transporter, conserved site PAJ_RS01770 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS01775 IPR002187 Nitrogen regulatory protein PII PAJ_RS01775 IPR002332 Nitrogen regulatory protein P-II, urydylation site PAJ_RS01775 IPR011322 Nitrogen regulatory PII-like, alpha/beta PAJ_RS01775 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PAJ_RS01775 IPR017918 Nitrogen regulatory protein PII, conserved site PAJ_RS01780 IPR001905 Ammonium transporter PAJ_RS01780 IPR002229 Blood group Rhesus C/E/D polypeptide PAJ_RS01780 IPR018047 Ammonium transporter, conserved site PAJ_RS01780 IPR024041 Ammonium transporter AmtB-like domain PAJ_RS01780 IPR029020 Ammonium/urea transporter PAJ_RS01785 IPR003703 Acyl-CoA thioesterase PAJ_RS01785 IPR029069 HotDog domain PAJ_RS01795 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS01795 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding PAJ_RS01805 IPR007985 Haemolysin expression modulating, HHA PAJ_RS01810 IPR019693 Biofilm formation regulator YbaJ PAJ_RS01820 IPR003439 ABC transporter-like PAJ_RS01820 IPR003593 AAA+ ATPase domain PAJ_RS01820 IPR017871 ABC transporter, conserved site PAJ_RS01820 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS01825 IPR001626 ABC-3 PAJ_RS01825 IPR029022 ABC transporter, BtuC-like PAJ_RS01830 IPR006127 Periplasmic solute binding protein family PAJ_RS01830 IPR006128 Adhesion lipoprotein PAJ_RS01830 IPR006129 Adhesin B PAJ_RS01835 IPR000473 Ribosomal protein L36 PAJ_RS01840 IPR002150 Ribosomal protein L31 PAJ_RS01840 IPR027493 Ribosomal protein L31 type B PAJ_RS01845 IPR001036 Acriflavin resistance protein PAJ_RS01845 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 PAJ_RS01845 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAJ_RS01850 IPR006143 RND efflux pump, membrane fusion protein PAJ_RS01850 IPR032317 PAJ_RS01850 PAJ_RS01855 IPR001647 DNA-binding HTH domain, TetR-type PAJ_RS01855 IPR009057 Homeodomain-like PAJ_RS01855 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAJ_RS01855 IPR013572 Transcription regulator MAATS, C-terminal PAJ_RS01855 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal PAJ_RS01855 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PAJ_RS01860 IPR010890 Primosomal replication PriB/PriC PAJ_RS01865 IPR007401 Protein of unknown function DUF454 PAJ_RS01870 IPR000836 Phosphoribosyltransferase domain PAJ_RS01870 IPR005764 Adenine phosphoribosyl transferase PAJ_RS01870 IPR029057 Phosphoribosyltransferase-like PAJ_RS01875 IPR001270 ClpA/B family PAJ_RS01875 IPR003593 AAA+ ATPase domain PAJ_RS01875 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal PAJ_RS01875 IPR012763 DNA polymerase III, subunit gamma/ tau PAJ_RS01875 IPR021029 DNA polymerase III, tau subunit, domain V PAJ_RS01875 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV PAJ_RS01875 IPR022754 DNA polymerase III, gamma subunit, domain III PAJ_RS01875 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS01880 IPR004401 Nucleoid-associated protein YbaB PAJ_RS01885 IPR000093 DNA recombination protein RecR PAJ_RS01885 IPR006171 Toprim domain PAJ_RS01885 IPR015967 Recombination protein RecR, conserved site PAJ_RS01885 IPR023627 Recombination protein RecR PAJ_RS01885 IPR023628 Recombination protein RecR, C4-type zinc finger PAJ_RS01890 IPR001404 Heat shock protein Hsp90 family PAJ_RS01890 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS01890 IPR019805 Heat shock protein Hsp90, conserved site PAJ_RS01890 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS01890 IPR020575 Heat shock protein Hsp90, N-terminal PAJ_RS01895 IPR000850 Adenylate kinase/UMP-CMP kinase PAJ_RS01895 IPR006259 Adenylate kinase subfamily PAJ_RS01895 IPR007862 Adenylate kinase, active site lid domain PAJ_RS01895 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS01900 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PAJ_RS01900 IPR011611 Carbohydrate kinase PfkB PAJ_RS01900 IPR029056 Ribokinase-like PAJ_RS01905 IPR003148 Regulator of K+ conductance, N-terminal PAJ_RS01905 IPR004771 K+/H+ exchanger PAJ_RS01905 IPR006153 Cation/H+ exchanger PAJ_RS01905 IPR016040 NAD(P)-binding domain PAJ_RS01910 IPR004843 Calcineurin-like phosphoesterase domain, apaH type PAJ_RS01910 IPR006146 5'-Nucleotidase, conserved site PAJ_RS01910 IPR006179 5'-Nucleotidase/apyrase PAJ_RS01910 IPR008334 5'-Nucleotidase, C-terminal PAJ_RS01910 IPR029052 Metallo-dependent phosphatase-like PAJ_RS01915 IPR007896 Transmembrane pair, bacterial PAJ_RS01920 IPR000847 Transcription regulator HTH, LysR PAJ_RS01920 IPR005119 LysR, substrate-binding PAJ_RS01920 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS01925 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC PAJ_RS01925 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain PAJ_RS01930 IPR002816 Pheromone shutdown, TraB PAJ_RS01935 IPR001757 Cation-transporting P-type ATPase PAJ_RS01935 IPR006121 Heavy metal-associated domain, HMA PAJ_RS01935 IPR008250 P-type ATPase, A domain PAJ_RS01935 IPR017969 Heavy-metal-associated, conserved site PAJ_RS01935 IPR018303 P-type ATPase, phosphorylation site PAJ_RS01935 IPR023214 HAD-like domain PAJ_RS01935 IPR023299 P-type ATPase, cytoplasmic domain N PAJ_RS01935 IPR027256 Cation-transporting P-type ATPase, subfamily IB PAJ_RS01950 IPR000551 MerR-type HTH domain PAJ_RS01950 IPR009061 DNA binding domain, putative PAJ_RS01950 IPR011789 Cu(I)-responsive transcriptional regulator PAJ_RS01955 IPR002810 NfeD-like, C-terminal domain PAJ_RS01955 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS01960 IPR001107 Band 7 protein PAJ_RS01960 IPR001972 Stomatin family PAJ_RS01960 IPR018080 Band 7/stomatin-like, conserved site PAJ_RS01965 IPR005746 Thioredoxin PAJ_RS01965 IPR011990 Tetratricopeptide-like helical domain PAJ_RS01965 IPR012336 Thioredoxin-like fold PAJ_RS01965 IPR013766 Thioredoxin domain PAJ_RS01970 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS01970 IPR016040 NAD(P)-binding domain PAJ_RS01970 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS01975 IPR008265 Lipase, GDSL, active site PAJ_RS01975 IPR013830 PAJ_RS01975 PAJ_RS01980 IPR003439 ABC transporter-like PAJ_RS01980 IPR003593 AAA+ ATPase domain PAJ_RS01980 IPR017871 ABC transporter, conserved site PAJ_RS01980 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS01985 IPR003838 Permease FtsX-like PAJ_RS01990 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type PAJ_RS01990 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit PAJ_RS01990 IPR011054 Rudiment single hybrid motif PAJ_RS01990 IPR013815 ATP-grasp fold, subdomain 1 PAJ_RS01990 IPR013816 ATP-grasp fold, subdomain 2 PAJ_RS01990 IPR016185 Pre-ATP-grasp domain PAJ_RS01995 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain PAJ_RS01995 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE PAJ_RS02000 IPR018723 Protein of unknown function DUF2254, membrane PAJ_RS02005 IPR004843 Calcineurin-like phosphoesterase domain, apaH type PAJ_RS02005 IPR010138 UDP-2,3-diacylglucosamine hydrolase PAJ_RS02005 IPR029052 Metallo-dependent phosphatase-like PAJ_RS02010 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain PAJ_RS02010 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site PAJ_RS02010 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase PAJ_RS02010 IPR029000 Cyclophilin-like domain PAJ_RS02015 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding PAJ_RS02015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS02015 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR PAJ_RS02015 IPR015803 Cysteine-tRNA ligase PAJ_RS02015 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase PAJ_RS02015 IPR032678 PAJ_RS02015 PAJ_RS02020 IPR003959 ATPase, AAA-type, core PAJ_RS02020 IPR014555 RecF-like PAJ_RS02020 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS02025 IPR002942 RNA-binding S4 domain PAJ_RS02030 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase PAJ_RS02030 IPR016040 NAD(P)-binding domain PAJ_RS02030 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PAJ_RS02030 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PAJ_RS02030 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site PAJ_RS02035 IPR009587 Protein of unknown function DUF1198 PAJ_RS02055 IPR025557 Protein of unknown function DUF4282 PAJ_RS02065 IPR025686 Glucosyl transferase II PAJ_RS02070 IPR001173 Glycosyltransferase 2-like PAJ_RS02070 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS02075 IPR007267 GtrA-like protein PAJ_RS02075 IPR016480 Glucose translocase, bactoprenol-linked PAJ_RS02090 IPR005565 Haemolysin activator HlyB PAJ_RS02090 IPR013686 Polypeptide-transport-associated, ShlB-type PAJ_RS02090 IPR027282 Two partner secretion pathway transporter PAJ_RS02095 IPR006914 VENN motif-containing domain PAJ_RS02095 IPR008619 Filamentous haemagglutinin repeat PAJ_RS02095 IPR008638 Filamentous haemagglutinin, N-terminal PAJ_RS02095 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat PAJ_RS02095 IPR011050 Pectin lyase fold/virulence factor PAJ_RS02095 IPR012334 Pectin lyase fold PAJ_RS02095 IPR024973 ESPR domain PAJ_RS02095 IPR025157 Haemagluttinin repeat PAJ_RS02095 IPR029113 Putative toxin 50 PAJ_RS02105 IPR028048 HNH/Endo VII superfamily nuclease toxins PAJ_RS02150 IPR002514 Transposase IS3/IS911family PAJ_RS02150 IPR009057 Homeodomain-like PAJ_RS02170 IPR001826 RHS protein PAJ_RS02170 IPR006530 YD repeat PAJ_RS02170 IPR008727 PAAR motif PAJ_RS02170 IPR022385 Rhs repeat-associated core PAJ_RS02170 IPR031325 PAJ_RS02170 PAJ_RS02175 IPR014894 Protein DcrB PAJ_RS02175 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich PAJ_RS02185 IPR000914 Bacterial extracellular solute-binding protein, family 5 PAJ_RS02185 IPR030678 PAJ_RS02185 PAJ_RS02200 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase PAJ_RS02200 IPR015069 Domain of unknown function DUF1868 PAJ_RS02205 IPR009015 L-fucose isomerase, N-terminal/central domain PAJ_RS02205 IPR015888 L-fucose isomerase, C-terminal PAJ_RS02210 IPR001927 Sodium:galactoside symporter PAJ_RS02210 IPR020846 Major facilitator superfamily domain PAJ_RS02220 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS02225 IPR016040 NAD(P)-binding domain PAJ_RS02225 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS02230 IPR004899 Pertactin, central region PAJ_RS02230 IPR005546 Autotransporter beta-domain PAJ_RS02230 IPR006315 Outer membrane autotransporter barrel PAJ_RS02230 IPR011050 Pectin lyase fold/virulence factor PAJ_RS02230 IPR012332 P22 tailspike C-terminal domain-like PAJ_RS02240 IPR003663 Sugar/inositol transporter PAJ_RS02240 IPR005828 General substrate transporter PAJ_RS02240 IPR005829 Sugar transporter, conserved site PAJ_RS02240 IPR020846 Major facilitator superfamily domain PAJ_RS02245 IPR000259 Fimbrial-type adhesion domain PAJ_RS02245 IPR008966 Adhesion domain PAJ_RS02250 IPR000259 Fimbrial-type adhesion domain PAJ_RS02250 IPR008966 Adhesion domain PAJ_RS02255 IPR000015 Outer membrane usher protein PAJ_RS02255 IPR018030 Fimbrial membrane usher, conserved site PAJ_RS02255 IPR025885 PapC, N-terminal domain PAJ_RS02255 IPR025949 PapC-like, C-terminal domain PAJ_RS02260 IPR001829 Pili assembly chaperone, bacterial PAJ_RS02260 IPR008962 PapD-like PAJ_RS02260 IPR016147 PapD, N-terminal, bacterial PAJ_RS02260 IPR016148 Pili assembly chaperone, C-terminal domain PAJ_RS02265 IPR000259 Fimbrial-type adhesion domain PAJ_RS02265 IPR008966 Adhesion domain PAJ_RS02280 IPR000259 Fimbrial-type adhesion domain PAJ_RS02280 IPR008966 Adhesion domain PAJ_RS02285 IPR001633 EAL domain PAJ_RS02295 IPR013216 Methyltransferase type 11 PAJ_RS02295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS02310 IPR010699 Protein of unknown function DUF1275 PAJ_RS02315 IPR001206 Diacylglycerol kinase, catalytic domain PAJ_RS02315 IPR005218 Diacylglycerol/lipid kinase PAJ_RS02315 IPR016064 ATP-NAD kinase-like domain PAJ_RS02315 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 PAJ_RS02320 IPR011051 RmlC-like cupin domain PAJ_RS02320 IPR013096 Cupin 2, conserved barrel PAJ_RS02320 IPR014710 RmlC-like jelly roll fold PAJ_RS02335 IPR002549 Uncharacterised protein family UPF0118 PAJ_RS02340 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAJ_RS02345 IPR002085 Alcohol dehydrogenase superfamily, zinc-type PAJ_RS02345 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PAJ_RS02345 IPR011032 GroES (chaperonin 10)-like PAJ_RS02345 IPR013154 Alcohol dehydrogenase GroES-like PAJ_RS02345 IPR016040 NAD(P)-binding domain PAJ_RS02345 IPR027399 Alcohol dehydrogenase GroES-associated N-terminal domain PAJ_RS02350 IPR004694 Hydroxy amino acid transporter PAJ_RS02355 IPR002491 ABC transporter periplasmic binding domain PAJ_RS02360 IPR024572 Protein of unknown function DUF3315 PAJ_RS02365 IPR000150 Cof protein PAJ_RS02365 IPR006379 HAD-superfamily hydrolase, subfamily IIB PAJ_RS02365 IPR023214 HAD-like domain PAJ_RS02370 IPR001670 Alcohol dehydrogenase, iron-type PAJ_RS02375 IPR003474 Gluconate transporter PAJ_RS02390 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP PAJ_RS02390 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel PAJ_RS02395 IPR002059 Cold-shock protein, DNA-binding PAJ_RS02395 IPR011129 Cold shock protein PAJ_RS02395 IPR012156 Cold shock, CspA PAJ_RS02395 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS02395 IPR019844 Cold-shock conserved site PAJ_RS02400 IPR000182 GNAT domain PAJ_RS02400 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS02405 IPR001110 Uncharacterised protein family UPF0012, conserved site PAJ_RS02405 IPR003010 Carbon-nitrogen hydrolase PAJ_RS02410 IPR003369 Sec-independent protein translocase protein TatA/B/E PAJ_RS02410 IPR006312 Sec-independent protein translocase protein TatA/E PAJ_RS02410 IPR024905 Sec-independent protein translocase protein TatE PAJ_RS02415 IPR003698 Lipoyl synthase PAJ_RS02415 IPR006638 Elongator protein 3/MiaB/NifB PAJ_RS02415 IPR007197 Radical SAM PAJ_RS02415 IPR013785 Aldolase-type TIM barrel PAJ_RS02415 IPR031691 PAJ_RS02415 PAJ_RS02420 IPR000544 Octanoyltransferase PAJ_RS02420 IPR004143 Biotin/lipoate A/B protein ligase PAJ_RS02420 IPR020605 Octanoyltransferase, conserved site PAJ_RS02425 IPR007454 Uncharacterised protein family UPF0250 PAJ_RS02425 IPR027471 YbeD-like domain PAJ_RS02430 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal PAJ_RS02430 IPR012338 Beta-lactamase/transpeptidase-like PAJ_RS02430 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal PAJ_RS02430 IPR015956 Penicillin-binding protein-associated PAJ_RS02430 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A PAJ_RS02435 IPR007730 Sporulation-related domain PAJ_RS02435 IPR009009 RlpA-like double-psi beta-barrel domain PAJ_RS02435 IPR012997 Rare lipoprotein A, bacterial PAJ_RS02440 IPR001182 Cell cycle protein FtsW/RodA PAJ_RS02440 IPR011923 Rod shape-determining protein RodA PAJ_RS02440 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site PAJ_RS02445 IPR001460 Penicillin-binding protein, transpeptidase PAJ_RS02445 IPR005311 Penicillin-binding protein, dimerisation domain PAJ_RS02445 IPR012338 Beta-lactamase/transpeptidase-like PAJ_RS02445 IPR017790 Penicillin-binding protein 2 PAJ_RS02450 IPR003742 SPOUT methyltransferase, predicted PAJ_RS02450 IPR016051 Ribosomal RNA large subunit methyltransferase H PAJ_RS02450 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PAJ_RS02450 IPR029028 Alpha/beta knot methyltransferases PAJ_RS02455 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PAJ_RS02460 IPR004821 Cytidyltransferase-like domain PAJ_RS02460 IPR005248 Probable nicotinate-nucleotide adenylyltransferase PAJ_RS02460 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS02465 IPR005790 DNA polymerase III, delta subunit PAJ_RS02465 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal PAJ_RS02465 IPR010372 DNA polymerase III, delta PAJ_RS02465 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS02465 IPR032780 PAJ_RS02465 PAJ_RS02470 IPR007485 Lipopolysaccharide assembly, LptE PAJ_RS02475 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PAJ_RS02475 IPR002300 Aminoacyl-tRNA synthetase, class Ia PAJ_RS02475 IPR002302 Leucine-tRNA ligase PAJ_RS02475 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain PAJ_RS02475 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding PAJ_RS02475 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding PAJ_RS02475 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS02475 IPR025709 Leucyl-tRNA synthetase, editing domain PAJ_RS02480 IPR009912 Protein of unknown function DUF1451 PAJ_RS02485 IPR003439 ABC transporter-like PAJ_RS02485 IPR003593 AAA+ ATPase domain PAJ_RS02485 IPR017871 ABC transporter, conserved site PAJ_RS02485 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS02485 IPR030206 PAJ_RS02485 PAJ_RS02485 IPR030679 PAJ_RS02485 PAJ_RS02490 IPR000515 MetI-like domain PAJ_RS02490 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS02490 IPR030205 PAJ_RS02490 PAJ_RS02495 IPR000515 MetI-like domain PAJ_RS02495 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS02495 IPR030202 PAJ_RS02495 PAJ_RS02500 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS02505 IPR003010 Carbon-nitrogen hydrolase PAJ_RS02505 IPR004563 Apolipoprotein N-acyltransferase PAJ_RS02510 IPR000644 CBS domain PAJ_RS02510 IPR005170 Transporter-associated domain PAJ_RS02510 IPR016166 FAD-binding, type 2 PAJ_RS02510 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 PAJ_RS02515 IPR002036 Endoribonuclease YbeY PAJ_RS02515 IPR020549 Endoribonuclease YbeY, conserved site PAJ_RS02515 IPR023091 Metalloprotease catalytic domain, predicted PAJ_RS02520 IPR003714 PhoH-like protein PAJ_RS02520 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS02525 IPR002792 TRAM domain PAJ_RS02525 IPR005839 Methylthiotransferase PAJ_RS02525 IPR006463 tRNA-i(6)A37 modification enzyme MiaB PAJ_RS02525 IPR006638 Elongator protein 3/MiaB/NifB PAJ_RS02525 IPR007197 Radical SAM PAJ_RS02525 IPR013848 Methylthiotransferase, N-terminal PAJ_RS02525 IPR020612 Methylthiotransferase, conserved site PAJ_RS02525 IPR023404 Radical SAM, alpha/beta horseshoe PAJ_RS02525 IPR023970 Methylthiotransferase/radical SAM-type protein PAJ_RS02530 IPR002938 Monooxygenase, FAD-binding PAJ_RS02530 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 PAJ_RS02530 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS02570 IPR001962 Asparagine synthase PAJ_RS02570 IPR006426 Asparagine synthase, glutamine-hydrolyzing PAJ_RS02570 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS02570 IPR017932 Glutamine amidotransferase type 2 domain PAJ_RS02570 IPR029055 Nucleophile aminohydrolases, N-terminal PAJ_RS02575 IPR006357 HAD-superfamily hydrolase, subfamily IIA PAJ_RS02575 IPR023214 HAD-like domain PAJ_RS02575 IPR023215 Nitrophenylphosphatase-like domain PAJ_RS02580 IPR000600 ROK PAJ_RS02580 IPR000835 MarR-type HTH domain PAJ_RS02580 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS02585 IPR003764 N-acetylglucosamine-6-phosphate deacetylase PAJ_RS02585 IPR006680 Amidohydrolase 1 PAJ_RS02585 IPR011059 Metal-dependent hydrolase, composite domain PAJ_RS02585 IPR032466 PAJ_RS02585 PAJ_RS02590 IPR004547 Glucosamine-6-phosphate isomerase PAJ_RS02590 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase PAJ_RS02590 IPR018321 Glucosamine-6-phosphate isomerase, conserved site PAJ_RS02595 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 PAJ_RS02595 IPR001996 Phosphotransferase system, IIB component, type 1 PAJ_RS02595 IPR003352 Phosphotransferase system, EIIC PAJ_RS02595 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component PAJ_RS02595 IPR011055 Duplicated hybrid motif PAJ_RS02595 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site PAJ_RS02600 IPR000924 Glutamyl/glutaminyl-tRNA synthetase PAJ_RS02600 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PAJ_RS02600 IPR004514 Glutamine-tRNA synthetase PAJ_RS02600 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain PAJ_RS02600 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS02600 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain PAJ_RS02600 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain PAJ_RS02600 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain PAJ_RS02600 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain PAJ_RS02600 IPR022861 Glutamine-tRNA ligase, bacterial PAJ_RS02605 IPR032710 PAJ_RS02605 PAJ_RS02610 IPR002481 Ferric-uptake regulator PAJ_RS02610 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS02615 IPR001226 Flavodoxin, conserved site PAJ_RS02615 IPR008254 Flavodoxin/nitric oxide synthase PAJ_RS02615 IPR010086 Flavodoxin, long chain PAJ_RS02615 IPR029039 Flavoprotein-like PAJ_RS02620 IPR002145 Ribbon-helix-helix protein, copG PAJ_RS02625 IPR000073 Alpha/beta hydrolase fold-1 PAJ_RS02625 IPR029058 Alpha/Beta hydrolase fold PAJ_RS02630 IPR005621 Regulation modulator SeqA PAJ_RS02630 IPR010985 Ribbon-helix-helix PAJ_RS02630 IPR013321 Arc-type ribbon-helix-helix PAJ_RS02630 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain PAJ_RS02635 IPR005843 Alpha-D-phosphohexomutase, C-terminal PAJ_RS02635 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I PAJ_RS02635 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II PAJ_RS02635 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III PAJ_RS02635 IPR005852 Phosphoglucomutase, alpha-D-glucose specific PAJ_RS02635 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III PAJ_RS02635 IPR016066 Alpha-D-phosphohexomutase, conserved site PAJ_RS02640 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS02640 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS02640 IPR011006 CheY-like superfamily PAJ_RS02640 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS02645 IPR019663 Uncharacterised protein YbfA PAJ_RS02650 IPR007553 Domain of unknown function DUF523 PAJ_RS02650 IPR013560 Domain of unknown function DUF1722 PAJ_RS02650 IPR017087 Uncharacterised conserved protein UCP037004 PAJ_RS02655 IPR002081 Cryptochrome/DNA photolyase, class 1 PAJ_RS02655 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal PAJ_RS02655 IPR006050 DNA photolyase, N-terminal PAJ_RS02655 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS02655 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal PAJ_RS02660 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PAJ_RS02665 IPR003833 Allophanate hydrolase subunit 1 PAJ_RS02665 IPR010016 Sensor histidine kinase inhibitor, KipI family PAJ_RS02665 IPR024946 Arginine repressor C-terminal-like domain PAJ_RS02665 IPR029000 Cyclophilin-like domain PAJ_RS02670 IPR003778 Allophanate hydrolase subunit 2 PAJ_RS02670 IPR029000 Cyclophilin-like domain PAJ_RS02675 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF PAJ_RS02675 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel PAJ_RS02680 IPR010374 Protein of unknown function DUF969 PAJ_RS02685 IPR009323 Protein of unknown function DUF979 PAJ_RS02690 IPR000816 Peptidase C15, pyroglutamyl peptidase I PAJ_RS02690 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like PAJ_RS02690 IPR029762 Pyroglutamyl peptidase I, bacterial-type PAJ_RS02695 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase PAJ_RS02695 IPR010979 Ribosomal protein S13-like, H2TH PAJ_RS02695 IPR012319 DNA glycosylase/AP lyase, catalytic domain PAJ_RS02695 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding PAJ_RS02695 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site PAJ_RS02695 IPR023713 Endonuclease VIII PAJ_RS02700 IPR000182 GNAT domain PAJ_RS02700 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS02705 IPR002020 Citrate synthase-like PAJ_RS02705 IPR010953 Citrate synthase, type I PAJ_RS02705 IPR016142 Citrate synthase-like, large alpha subdomain PAJ_RS02705 IPR016143 Citrate synthase-like, small alpha subdomain PAJ_RS02705 IPR019810 Citrate synthase active site PAJ_RS02705 IPR024176 Citrate synthase, bacterial-type PAJ_RS02710 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit PAJ_RS02710 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit PAJ_RS02710 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site PAJ_RS02715 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor PAJ_RS02720 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site PAJ_RS02720 IPR003953 FAD binding domain PAJ_RS02720 IPR011281 Succinate dehydrogenase, flavoprotein subunit PAJ_RS02720 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit PAJ_RS02720 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal PAJ_RS02720 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS02720 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PAJ_RS02720 IPR030664 PAJ_RS02720 PAJ_RS02725 IPR001041 2Fe-2S ferredoxin-type domain PAJ_RS02725 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein PAJ_RS02725 IPR009051 Alpha-helical ferredoxin PAJ_RS02725 IPR012675 Beta-grasp domain PAJ_RS02725 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAJ_RS02725 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal PAJ_RS02730 IPR001017 Dehydrogenase, E1 component PAJ_RS02730 IPR005475 Transketolase-like, pyrimidine-binding domain PAJ_RS02730 IPR011603 2-oxoglutarate dehydrogenase E1 component PAJ_RS02730 IPR029061 Thiamin diphosphate-binding fold PAJ_RS02730 IPR031717 PAJ_RS02730 PAJ_RS02730 IPR032106 PAJ_RS02730 PAJ_RS02735 IPR000089 Biotin/lipoyl attachment PAJ_RS02735 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain PAJ_RS02735 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PAJ_RS02735 IPR004167 E3 binding PAJ_RS02735 IPR006255 Dihydrolipoamide succinyltransferase PAJ_RS02735 IPR011053 Single hybrid motif PAJ_RS02735 IPR023213 Chloramphenicol acetyltransferase-like domain PAJ_RS02740 IPR005809 Succinyl-CoA synthetase, beta subunit PAJ_RS02740 IPR005811 ATP-citrate lyase/succinyl-CoA ligase PAJ_RS02740 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type PAJ_RS02740 IPR013815 ATP-grasp fold, subdomain 1 PAJ_RS02740 IPR013816 ATP-grasp fold, subdomain 2 PAJ_RS02740 IPR016102 Succinyl-CoA synthetase-like PAJ_RS02740 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site PAJ_RS02745 IPR003781 CoA-binding PAJ_RS02745 IPR005810 Succinyl-CoA ligase, alpha subunit PAJ_RS02745 IPR005811 ATP-citrate lyase/succinyl-CoA ligase PAJ_RS02745 IPR016040 NAD(P)-binding domain PAJ_RS02745 IPR016102 Succinyl-CoA synthetase-like PAJ_RS02745 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site PAJ_RS02750 IPR002585 Cytochrome d ubiquinol oxidase, subunit I PAJ_RS02755 IPR003317 Cytochrome d ubiquinol oxidase, subunit II PAJ_RS02760 IPR011724 Cyd operon protein YbgT PAJ_RS02760 IPR012994 Membrane bound YbgT-like PAJ_RS02765 IPR011846 Cyd operon protein YbgE PAJ_RS02770 IPR006683 Thioesterase superfamily PAJ_RS02770 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family PAJ_RS02770 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site PAJ_RS02770 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase PAJ_RS02770 IPR029069 HotDog domain PAJ_RS02775 IPR002898 MotA/TolQ/ExbB proton channel PAJ_RS02775 IPR014163 Tol-Pal system, TolQ PAJ_RS02780 IPR003400 Biopolymer transport protein ExbD/TolR PAJ_RS02780 IPR014168 Biopolymer transport, TolR PAJ_RS02785 IPR014161 Tol-Pal system, TolA PAJ_RS02790 IPR007195 TolB, N-terminal PAJ_RS02790 IPR011659 WD40-like Beta Propeller PAJ_RS02790 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB PAJ_RS02790 IPR015943 WD40/YVTN repeat-like-containing domain PAJ_RS02795 IPR006664 Outer membrane protein, bacterial PAJ_RS02795 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal PAJ_RS02795 IPR006690 Outer membrane protein, OmpA-like, conserved site PAJ_RS02795 IPR014169 Peptidoglycan-associated lipoprotein PAJ_RS02800 IPR011990 Tetratricopeptide-like helical domain PAJ_RS02800 IPR014162 Tol-Pal system, YbgF PAJ_RS02800 IPR019734 Tetratricopeptide repeat PAJ_RS02800 IPR032519 PAJ_RS02800 PAJ_RS02835 IPR003660 HAMP linker domain PAJ_RS02835 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS02835 IPR032255 PAJ_RS02835 PAJ_RS02840 IPR000035 Alkylbase DNA glycosidase, conserved site PAJ_RS02840 IPR003265 HhH-GPD domain PAJ_RS02840 IPR004026 Ada DNA repair, metal-binding PAJ_RS02840 IPR009057 Homeodomain-like PAJ_RS02840 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal PAJ_RS02840 IPR011257 DNA glycosylase PAJ_RS02840 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS02840 IPR018062 HTH domain AraC-type, conserved site PAJ_RS02840 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PAJ_RS02845 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain PAJ_RS02845 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS02845 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding PAJ_RS02845 IPR023546 Methylated-DNA--protein-cysteine methyltransferase PAJ_RS02850 IPR003473 Quinolinate synthetase A PAJ_RS02850 IPR023513 Quinolinate synthase A, type 1 PAJ_RS02855 IPR006419 Nicotinamide mononucleotide transporter PnuC PAJ_RS02860 IPR002524 Cation efflux protein PAJ_RS02860 IPR027469 Cation efflux protein transmembrane domain PAJ_RS02865 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS02865 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS02865 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS02865 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS02865 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS02865 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PAJ_RS02865 IPR011006 CheY-like superfamily PAJ_RS02870 IPR000792 Transcription regulator LuxR, C-terminal PAJ_RS02870 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS02870 IPR011006 CheY-like superfamily PAJ_RS02870 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS02870 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS02875 IPR020363 Uncharacterised protein family YbgS PAJ_RS02880 IPR006218 DAHP synthetase I/KDSA PAJ_RS02880 IPR006219 DHAP synthase, class 1 PAJ_RS02880 IPR013785 Aldolase-type TIM barrel PAJ_RS02885 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site PAJ_RS02885 IPR005952 Phosphoglycerate mutase 1 PAJ_RS02885 IPR013078 Histidine phosphatase superfamily, clade-1 PAJ_RS02885 IPR029033 Histidine phosphatase superfamily PAJ_RS02890 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase PAJ_RS02890 IPR011013 Galactose mutarotase-like domain PAJ_RS02890 IPR013458 Aldose 1-epimerase, bacterial PAJ_RS02890 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup PAJ_RS02890 IPR015443 Aldose 1-epimerase PAJ_RS02895 IPR000705 Galactokinase PAJ_RS02895 IPR006203 GHMP kinase, ATP-binding, conserved site PAJ_RS02895 IPR006204 GHMP kinase N-terminal domain PAJ_RS02895 IPR006206 Mevalonate/galactokinase PAJ_RS02895 IPR013750 GHMP kinase, C-terminal domain PAJ_RS02895 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAJ_RS02895 IPR019539 Galactokinase galactose-binding domain PAJ_RS02895 IPR019741 Galactokinase, conserved site PAJ_RS02895 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS02895 IPR022963 Galactokinase, bacterial PAJ_RS02900 IPR001937 Galactose-1-phosphate uridyl transferase, class I PAJ_RS02900 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal PAJ_RS02900 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal PAJ_RS02900 IPR011146 HIT-like domain PAJ_RS02900 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site PAJ_RS02905 IPR003439 ABC transporter-like PAJ_RS02905 IPR003593 AAA+ ATPase domain PAJ_RS02905 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS02910 IPR000847 Transcription regulator HTH, LysR PAJ_RS02910 IPR003725 Molybdenum-binding protein, N-terminal PAJ_RS02910 IPR004606 Molybdenum-pterin binding PAJ_RS02910 IPR005116 Transport-associated OB, type 1 PAJ_RS02910 IPR008995 Molybdate/tungstate binding, C-terminal PAJ_RS02910 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS02910 IPR016462 Molybdate-dependent transcriptional regulator, ModE PAJ_RS02915 IPR005950 Molybdenum ABC transporter, periplasmic binding protein PAJ_RS02920 IPR000515 MetI-like domain PAJ_RS02920 IPR011867 Molybdate ABC transporter, permease protein PAJ_RS02925 IPR003439 ABC transporter-like PAJ_RS02925 IPR003593 AAA+ ATPase domain PAJ_RS02925 IPR005116 Transport-associated OB, type 1 PAJ_RS02925 IPR008995 Molybdate/tungstate binding, C-terminal PAJ_RS02925 IPR011868 Molybdate ABC transporter, ATP-binding protein PAJ_RS02925 IPR017871 ABC transporter, conserved site PAJ_RS02925 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS02930 IPR000150 Cof protein PAJ_RS02930 IPR006379 HAD-superfamily hydrolase, subfamily IIB PAJ_RS02930 IPR023214 HAD-like domain PAJ_RS02935 IPR011045 Nitrous oxide reductase, N-terminal PAJ_RS02935 IPR015943 WD40/YVTN repeat-like-containing domain PAJ_RS02935 IPR019405 Lactonase, 7-bladed beta propeller PAJ_RS02935 IPR022528 6-phosphogluconolactonase, YbhE-type PAJ_RS02940 IPR005247 YbhB/YbcL PAJ_RS02940 IPR008914 Phosphatidylethanolamine-binding protein PEBP PAJ_RS02945 IPR005814 Aminotransferase class-III PAJ_RS02945 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA PAJ_RS02945 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS02945 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS02945 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS02950 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB PAJ_RS02950 IPR006638 Elongator protein 3/MiaB/NifB PAJ_RS02950 IPR007197 Radical SAM PAJ_RS02950 IPR010722 Biotin and thiamin synthesis-associated domain PAJ_RS02950 IPR013785 Aldolase-type TIM barrel PAJ_RS02950 IPR024177 Biotin synthase PAJ_RS02955 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site PAJ_RS02955 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type PAJ_RS02955 IPR004839 Aminotransferase, class I/classII PAJ_RS02955 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS02955 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS02955 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS02955 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria PAJ_RS02960 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC PAJ_RS02960 IPR013216 Methyltransferase type 11 PAJ_RS02960 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS02965 IPR004472 Dethiobiotin synthase BioD PAJ_RS02965 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS02970 IPR003439 ABC transporter-like PAJ_RS02970 IPR003593 AAA+ ATPase domain PAJ_RS02970 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS02975 IPR001650 Helicase, C-terminal PAJ_RS02975 IPR001943 UVR domain PAJ_RS02975 IPR004807 UvrABC system, subunit B PAJ_RS02975 IPR006935 Helicase/UvrB domain PAJ_RS02975 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS02975 IPR024759 UvrB, YAD/RRR-motif-containing domain PAJ_RS02975 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS02980 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 PAJ_RS02980 IPR010119 Gluconeogenesis factor PAJ_RS02985 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site PAJ_RS02985 IPR006638 Elongator protein 3/MiaB/NifB PAJ_RS02985 IPR007197 Radical SAM PAJ_RS02985 IPR010505 Molybdenum cofactor synthesis C-terminal PAJ_RS02985 IPR013483 Molybdenum cofactor biosynthesis protein A PAJ_RS02985 IPR013785 Aldolase-type TIM barrel PAJ_RS02990 IPR001453 Molybdopterin binding domain PAJ_RS02990 IPR012245 Molybdenum cofactor biosynthesis protein MoaB PAJ_RS02990 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria PAJ_RS02995 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain PAJ_RS02995 IPR023045 Molybdenum cofactor biosynthesis C PAJ_RS02995 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type PAJ_RS03000 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 PAJ_RS03000 IPR010034 Molybdopterin converting factor, subunit 1 PAJ_RS03000 IPR012675 Beta-grasp domain PAJ_RS03000 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PAJ_RS03005 IPR003448 Molybdopterin biosynthesis MoaE PAJ_RS03010 IPR011673 Protein of unknown function DUF1615 PAJ_RS03015 IPR006214 Bax inhibitor 1-related PAJ_RS03020 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PAJ_RS03025 IPR001736 Phospholipase D/Transphosphatidylase PAJ_RS03025 IPR025202 Phospholipase D-like domain PAJ_RS03025 IPR030872 PAJ_RS03025 PAJ_RS03030 IPR005135 Endonuclease/exonuclease/phosphatase PAJ_RS03035 IPR021303 Uncharacterised protein family, inner membrane, YbhQ PAJ_RS03040 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site PAJ_RS03040 IPR001650 Helicase, C-terminal PAJ_RS03040 IPR011545 DEAD/DEAH box helicase domain PAJ_RS03040 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS03040 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03040 IPR028622 ATP-dependent RNA helicase RhlE PAJ_RS03045 IPR001269 tRNA-dihydrouridine synthase PAJ_RS03045 IPR013785 Aldolase-type TIM barrel PAJ_RS03045 IPR018517 tRNA-dihydrouridine synthase, conserved site PAJ_RS03045 IPR032886 PAJ_RS03045 PAJ_RS03050 IPR016898 Polyphosphate kinase 2 PAJ_RS03050 IPR022486 Polyphosphate kinase 2, PA0141 PAJ_RS03050 IPR022488 Polyphosphate kinase-2-related PAJ_RS03050 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03055 IPR001204 Phosphate transporter PAJ_RS03060 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB PAJ_RS03065 IPR005490 L,D-transpeptidase catalytic domain PAJ_RS03070 IPR008928 Six-hairpin glycosidase-like PAJ_RS03070 IPR011613 Glycoside hydrolase family 15 PAJ_RS03070 IPR012341 Six-hairpin glycosidase PAJ_RS03075 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS03075 IPR016040 NAD(P)-binding domain PAJ_RS03075 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS03080 IPR032816 PAJ_RS03080 PAJ_RS03080 IPR032818 PAJ_RS03080 PAJ_RS03085 IPR009698 Protein of unknown function DUF1282 PAJ_RS03090 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal PAJ_RS03090 IPR012338 Beta-lactamase/transpeptidase-like PAJ_RS03090 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A PAJ_RS03095 IPR006685 Mechanosensitive ion channel MscS PAJ_RS03095 IPR010920 Like-Sm (LSM) domain PAJ_RS03095 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 PAJ_RS03095 IPR011066 Mechanosensitive ion channel MscS, C-terminal PAJ_RS03095 IPR022249 Protein of unknown function DUF3772 PAJ_RS03100 IPR006094 FAD linked oxidase, N-terminal PAJ_RS03100 IPR012256 D-lactate dehydrogenase PAJ_RS03100 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal PAJ_RS03100 IPR016164 FAD-linked oxidase-like, C-terminal PAJ_RS03100 IPR016166 FAD-binding, type 2 PAJ_RS03100 IPR016167 FAD-binding, type 2, subdomain 1 PAJ_RS03100 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 PAJ_RS03100 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 PAJ_RS03100 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 PAJ_RS03105 IPR001764 Glycoside hydrolase, family 3, N-terminal PAJ_RS03105 IPR002772 Glycoside hydrolase family 3 C-terminal domain PAJ_RS03105 IPR017853 Glycoside hydrolase, superfamily PAJ_RS03105 IPR019800 Glycoside hydrolase, family 3, active site PAJ_RS03105 IPR026891 Fibronectin type III-like domain PAJ_RS03105 IPR026892 Glycoside hydrolase family 3 PAJ_RS03115 IPR003660 HAMP linker domain PAJ_RS03115 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS03115 IPR033479 PAJ_RS03115 PAJ_RS03120 IPR000086 NUDIX hydrolase domain PAJ_RS03120 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 PAJ_RS03120 IPR015797 NUDIX hydrolase domain-like PAJ_RS03125 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain PAJ_RS03130 IPR000515 MetI-like domain PAJ_RS03135 IPR003439 ABC transporter-like PAJ_RS03135 IPR003593 AAA+ ATPase domain PAJ_RS03135 IPR017871 ABC transporter, conserved site PAJ_RS03135 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03140 IPR000515 MetI-like domain PAJ_RS03145 IPR000551 MerR-type HTH domain PAJ_RS03145 IPR009061 DNA binding domain, putative PAJ_RS03150 IPR001387 Cro/C1-type helix-turn-helix domain PAJ_RS03150 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS03150 IPR011051 RmlC-like cupin domain PAJ_RS03150 IPR014710 RmlC-like jelly roll fold PAJ_RS03155 IPR000182 GNAT domain PAJ_RS03155 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS03160 IPR006554 Helicase-like, DEXD box c2 type PAJ_RS03160 IPR006555 ATP-dependent helicase, C-terminal PAJ_RS03160 IPR010614 DEAD2 PAJ_RS03160 IPR011545 DEAD/DEAH box helicase domain PAJ_RS03160 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS03160 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03165 IPR000312 Glycosyl transferase, family 3 PAJ_RS03165 IPR017459 Glycosyl transferase family 3, N-terminal domain PAJ_RS03170 IPR002933 Peptidase M20 PAJ_RS03170 IPR011650 Peptidase M20, dimerisation domain PAJ_RS03170 IPR017439 Amidohydrolase PAJ_RS03175 IPR000843 Transcription regulator HTH, LacI PAJ_RS03175 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS03175 IPR028082 Periplasmic binding protein-like I PAJ_RS03180 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase PAJ_RS03180 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PAJ_RS03180 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PAJ_RS03180 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site PAJ_RS03180 IPR029017 Enolase N-terminal domain-like PAJ_RS03180 IPR029065 Enolase C-terminal domain-like PAJ_RS03185 IPR000849 Sugar phosphate transporter PAJ_RS03185 IPR004744 D-galactonate transporter PAJ_RS03185 IPR011701 Major facilitator superfamily PAJ_RS03185 IPR020846 Major facilitator superfamily domain PAJ_RS03190 IPR023636 Urocanase conserved site PAJ_RS03190 IPR023637 Urocanase PAJ_RS03195 IPR001106 Aromatic amino acid lyase PAJ_RS03195 IPR005921 Histidine ammonia-lyase PAJ_RS03195 IPR008948 L-Aspartase-like PAJ_RS03195 IPR022313 Phenylalanine/histidine ammonia-lyases, active site PAJ_RS03195 IPR024083 Fumarase/histidase, N-terminal PAJ_RS03200 IPR000524 Transcription regulator HTH, GntR PAJ_RS03200 IPR010248 Histidine utilization repressor PAJ_RS03200 IPR011663 UbiC transcription regulator-associated PAJ_RS03200 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS03200 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAJ_RS03205 IPR010282 Uncharacterised protein family HutD/Ves PAJ_RS03205 IPR011051 RmlC-like cupin domain PAJ_RS03205 IPR014710 RmlC-like jelly roll fold PAJ_RS03210 IPR006680 Amidohydrolase 1 PAJ_RS03210 IPR010252 Formiminoglutamate deiminase PAJ_RS03210 IPR011059 Metal-dependent hydrolase, composite domain PAJ_RS03210 IPR032466 PAJ_RS03210 PAJ_RS03215 IPR005920 Imidazolonepropionase PAJ_RS03215 IPR006680 Amidohydrolase 1 PAJ_RS03215 IPR011059 Metal-dependent hydrolase, composite domain PAJ_RS03215 IPR032466 PAJ_RS03215 PAJ_RS03220 IPR002508 Cell wall hydrolase/autolysin, catalytic PAJ_RS03220 IPR007709 N-formylglutamate amidohydrolase PAJ_RS03220 IPR010247 N-formylglutamate deformylase PAJ_RS03225 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS03230 IPR000515 MetI-like domain PAJ_RS03230 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS03235 IPR000515 MetI-like domain PAJ_RS03235 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS03240 IPR003439 ABC transporter-like PAJ_RS03240 IPR003593 AAA+ ATPase domain PAJ_RS03240 IPR017871 ABC transporter, conserved site PAJ_RS03240 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03240 IPR030679 PAJ_RS03240 PAJ_RS03245 IPR001106 Aromatic amino acid lyase PAJ_RS03245 IPR008948 L-Aspartase-like PAJ_RS03245 IPR024083 Fumarase/histidase, N-terminal PAJ_RS03250 IPR002563 Flavin reductase-like, FMN-binding PAJ_RS03250 IPR012349 FMN-binding split barrel PAJ_RS03255 IPR013120 Male sterility, NAD-binding PAJ_RS03255 IPR016040 NAD(P)-binding domain PAJ_RS03260 IPR010286 Ribosomal RNA large subunit methyltransferase F-like PAJ_RS03260 IPR016909 Ribosomal RNA large subunit methyltransferase F PAJ_RS03260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS03265 IPR003439 ABC transporter-like PAJ_RS03265 IPR003593 AAA+ ATPase domain PAJ_RS03265 IPR017871 ABC transporter, conserved site PAJ_RS03265 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03265 IPR030679 PAJ_RS03265 PAJ_RS03270 IPR000515 MetI-like domain PAJ_RS03270 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS03275 IPR001320 Ionotropic glutamate receptor PAJ_RS03275 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS03275 IPR018313 Extracellular solute-binding protein, family 3, conserved site PAJ_RS03280 IPR002177 DNA-binding protein Dps PAJ_RS03280 IPR008331 Ferritin/DPS protein domain PAJ_RS03280 IPR009078 Ferritin-like superfamily PAJ_RS03280 IPR012347 Ferritin-related PAJ_RS03280 IPR023067 DNA protection during starvation protein, gammaproteobacteria PAJ_RS03280 IPR023188 DNA-binding protein Dps, conserved site PAJ_RS03285 IPR000620 Drug/metabolite transporter PAJ_RS03290 IPR000758 Virulence-related outer membrane protein PAJ_RS03290 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel PAJ_RS03290 IPR027385 Outer membrane protein beta-barrel PAJ_RS03300 IPR001367 Iron dependent repressor-like, metal binding and dimerisation domain PAJ_RS03300 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS03300 IPR022687 Iron dependent repressor, N-terminal PAJ_RS03300 IPR022689 Iron dependent repressor, diptheria toxin type PAJ_RS03305 IPR004680 Citrate transporter-like domain PAJ_RS03310 IPR006143 RND efflux pump, membrane fusion protein PAJ_RS03310 IPR032317 PAJ_RS03310 PAJ_RS03315 IPR004638 Drug resistance transporter EmrB/QacA subfamily PAJ_RS03315 IPR011701 Major facilitator superfamily PAJ_RS03315 IPR020846 Major facilitator superfamily domain PAJ_RS03320 IPR003423 Outer membrane efflux protein PAJ_RS03320 IPR010131 RND efflux system, outer membrane lipoprotein, NodT PAJ_RS03325 IPR001801 Histone-like protein H-NS PAJ_RS03325 IPR027444 Histone-like protein H-NS, C-terminal domain PAJ_RS03325 IPR027454 Histone-like protein H-NS family, oligomerisation domain PAJ_RS03330 IPR003439 ABC transporter-like PAJ_RS03330 IPR003593 AAA+ ATPase domain PAJ_RS03330 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03330 IPR032781 PAJ_RS03330 PAJ_RS03335 IPR000594 UBA/THIF-type NAD/FAD binding fold PAJ_RS03335 IPR012730 Molybdopterin synthase sulfurylase MoeB PAJ_RS03335 IPR016040 NAD(P)-binding domain PAJ_RS03340 IPR001453 Molybdopterin binding domain PAJ_RS03340 IPR005110 MoeA, N-terminal and linker domain PAJ_RS03340 IPR005111 MoeA, C-terminal, domain IV PAJ_RS03340 IPR008284 Molybdenum cofactor biosynthesis, conserved site PAJ_RS03345 IPR000246 Peptidase T2, asparaginase 2 PAJ_RS03345 IPR029055 Nucleophile aminohydrolases, N-terminal PAJ_RS03350 IPR003439 ABC transporter-like PAJ_RS03350 IPR003593 AAA+ ATPase domain PAJ_RS03350 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PAJ_RS03350 IPR017871 ABC transporter, conserved site PAJ_RS03350 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03355 IPR000914 Bacterial extracellular solute-binding protein, family 5 PAJ_RS03355 IPR030678 PAJ_RS03355 PAJ_RS03360 IPR000515 MetI-like domain PAJ_RS03365 IPR000515 MetI-like domain PAJ_RS03365 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PAJ_RS03370 IPR025494 Protein of unknown function DUF4385 PAJ_RS03375 IPR005839 Methylthiotransferase PAJ_RS03375 IPR005840 Ribosomal protein S12 methylthiotransferase RimO PAJ_RS03375 IPR006638 Elongator protein 3/MiaB/NifB PAJ_RS03375 IPR007197 Radical SAM PAJ_RS03375 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS03375 IPR013848 Methylthiotransferase, N-terminal PAJ_RS03375 IPR020612 Methylthiotransferase, conserved site PAJ_RS03375 IPR023404 Radical SAM, alpha/beta horseshoe PAJ_RS03375 IPR023970 Methylthiotransferase/radical SAM-type protein PAJ_RS03380 IPR001765 Carbonic anhydrase PAJ_RS03380 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site PAJ_RS03385 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase PAJ_RS03385 IPR011042 Six-bladed beta-propeller, TolB-like PAJ_RS03385 IPR012938 Glucose/Sorbosone dehydrogenase PAJ_RS03390 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like PAJ_RS03390 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial PAJ_RS03390 IPR023214 HAD-like domain PAJ_RS03395 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal PAJ_RS03395 IPR012338 Beta-lactamase/transpeptidase-like PAJ_RS03395 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal PAJ_RS03395 IPR015956 Penicillin-binding protein-associated PAJ_RS03395 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A PAJ_RS03400 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAJ_RS03405 IPR006037 Regulator of K+ conductance, C-terminal PAJ_RS03405 IPR006512 YidE/YbjL duplication PAJ_RS03405 IPR023017 Transport protein YbjL, putative PAJ_RS03410 IPR020368 Uncharacterised protein family YbjM PAJ_RS03415 IPR002109 Glutaredoxin PAJ_RS03415 IPR011767 Glutaredoxin active site PAJ_RS03415 IPR011902 Glutaredoxin, GrxA PAJ_RS03415 IPR012336 Thioredoxin-like fold PAJ_RS03415 IPR014025 Glutaredoxin subgroup PAJ_RS03420 IPR010815 Protein of unknown function DUF1418 PAJ_RS03425 IPR000415 Nitroreductase-like PAJ_RS03425 IPR016446 Flavin oxidoreductase Frp family PAJ_RS03425 IPR029479 Nitroreductase PAJ_RS03430 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX PAJ_RS03430 IPR013651 ATP-grasp fold, RimK-type PAJ_RS03430 IPR013815 ATP-grasp fold, subdomain 1 PAJ_RS03430 IPR013816 ATP-grasp fold, subdomain 2 PAJ_RS03430 IPR016185 Pre-ATP-grasp domain PAJ_RS03430 IPR023533 Ribosomal S6 modification enzyme RimK PAJ_RS03435 IPR019660 Putative sensory transduction regulator YbjN PAJ_RS03440 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein PAJ_RS03445 IPR003439 ABC transporter-like PAJ_RS03445 IPR003593 AAA+ ATPase domain PAJ_RS03445 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit PAJ_RS03445 IPR008995 Molybdate/tungstate binding, C-terminal PAJ_RS03445 IPR013611 Transport-associated OB, type 2 PAJ_RS03445 IPR017871 ABC transporter, conserved site PAJ_RS03445 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03450 IPR000515 MetI-like domain PAJ_RS03455 IPR000515 MetI-like domain PAJ_RS03460 IPR019703 Protein of unknown function DUF2593 PAJ_RS03465 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD PAJ_RS03465 IPR010280 (Uracil-5)-methyltransferase family PAJ_RS03465 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC PAJ_RS03465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS03465 IPR030390 PAJ_RS03465 PAJ_RS03465 IPR030391 PAJ_RS03465 PAJ_RS03470 IPR001320 Ionotropic glutamate receptor PAJ_RS03470 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS03470 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein PAJ_RS03470 IPR018313 Extracellular solute-binding protein, family 3, conserved site PAJ_RS03475 IPR000515 MetI-like domain PAJ_RS03475 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS03485 IPR001320 Ionotropic glutamate receptor PAJ_RS03485 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS03485 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein PAJ_RS03485 IPR018313 Extracellular solute-binding protein, family 3, conserved site PAJ_RS03490 IPR003439 ABC transporter-like PAJ_RS03490 IPR003593 AAA+ ATPase domain PAJ_RS03490 IPR017871 ABC transporter, conserved site PAJ_RS03490 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03490 IPR030679 PAJ_RS03490 PAJ_RS03495 IPR024289 Domain of unknown function DUF3828 PAJ_RS03500 IPR002765 Uncharacterised protein family UPF0145 PAJ_RS03505 IPR002477 Peptidoglycan binding-like PAJ_RS03505 IPR002502 N-acetylmuramoyl-L-alanine amidase domain PAJ_RS03510 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase PAJ_RS03510 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS03510 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS03510 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS03510 IPR023603 Threonine aldolase PAJ_RS03515 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding PAJ_RS03515 IPR012000 Thiamine pyrophosphate enzyme, central domain PAJ_RS03515 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain PAJ_RS03515 IPR029035 DHS-like NAD/FAD-binding domain PAJ_RS03515 IPR029061 Thiamin diphosphate-binding fold PAJ_RS03520 IPR005642 Protein of unknown function DUF340, prokaryotic membrane PAJ_RS03525 IPR022602 Protein of unknown function DUF2813 PAJ_RS03525 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03530 IPR002059 Cold-shock protein, DNA-binding PAJ_RS03530 IPR011129 Cold shock protein PAJ_RS03530 IPR012156 Cold shock, CspA PAJ_RS03530 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS03530 IPR012751 CspD, cold shock PAJ_RS03530 IPR019844 Cold-shock conserved site PAJ_RS03535 IPR003769 Adaptor protein ClpS, core PAJ_RS03535 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PAJ_RS03535 IPR022935 ATP-dependent Clp protease adaptor protein ClpS PAJ_RS03540 IPR001270 ClpA/B family PAJ_RS03540 IPR003593 AAA+ ATPase domain PAJ_RS03540 IPR003959 ATPase, AAA-type, core PAJ_RS03540 IPR004176 Clp, N-terminal PAJ_RS03540 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA PAJ_RS03540 IPR018368 ClpA/B, conserved site 1 PAJ_RS03540 IPR019489 Clp ATPase, C-terminal PAJ_RS03540 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03540 IPR028299 ClpA/B, conserved site 2 PAJ_RS03550 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase PAJ_RS03550 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS03555 IPR003439 ABC transporter-like PAJ_RS03555 IPR003593 AAA+ ATPase domain PAJ_RS03555 IPR011527 ABC transporter type 1, transmembrane domain PAJ_RS03555 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC PAJ_RS03555 IPR017871 ABC transporter, conserved site PAJ_RS03555 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03560 IPR003439 ABC transporter-like PAJ_RS03560 IPR003593 AAA+ ATPase domain PAJ_RS03560 IPR011527 ABC transporter type 1, transmembrane domain PAJ_RS03560 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD PAJ_RS03560 IPR017871 ABC transporter, conserved site PAJ_RS03560 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03565 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II PAJ_RS03565 IPR005982 Thioredoxin reductase PAJ_RS03565 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site PAJ_RS03565 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS03570 IPR000485 AsnC-type HTH domain PAJ_RS03570 IPR011008 Dimeric alpha-beta barrel PAJ_RS03570 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS03570 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PAJ_RS03570 IPR019887 Transcription regulator AsnC-type, C-terminal PAJ_RS03570 IPR019888 Transcription regulator AsnC-type PAJ_RS03575 IPR002543 FtsK domain PAJ_RS03575 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS03575 IPR018541 FtsK gamma domain PAJ_RS03575 IPR025199 Domain of unknown function DUF4117 PAJ_RS03575 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03580 IPR004564 Outer membrane lipoprotein carrier protein LolA-like PAJ_RS03580 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria PAJ_RS03580 IPR029046 Lipoprotein localisation LolA/LolB/LppX PAJ_RS03585 IPR003593 AAA+ ATPase domain PAJ_RS03585 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal PAJ_RS03585 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal PAJ_RS03585 IPR021886 MgsA AAA+ ATPase C-terminal PAJ_RS03585 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03585 IPR032423 PAJ_RS03585 PAJ_RS03595 IPR011701 Major facilitator superfamily PAJ_RS03595 IPR020846 Major facilitator superfamily domain PAJ_RS03600 IPR001989 Radical-activating enzyme, conserved site PAJ_RS03600 IPR007197 Radical SAM PAJ_RS03600 IPR012838 Pyruvate formate-lyase activating enzyme PAJ_RS03605 IPR001150 Glycine radical domain PAJ_RS03605 IPR004184 Pyruvate formate lyase domain PAJ_RS03605 IPR005949 Formate acetyltransferase PAJ_RS03605 IPR019777 Formate C-acetyltransferase glycine radical, conserved site PAJ_RS03610 IPR000292 Formate/nitrite transporter PAJ_RS03610 IPR023271 Aquaporin-like PAJ_RS03610 IPR023999 Formate transporter FocA, putative PAJ_RS03610 IPR024002 Formate/nitrite transporter, conserved site PAJ_RS03615 IPR003776 YcaO-like domain PAJ_RS03620 IPR000192 Aminotransferase class V domain PAJ_RS03620 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS03620 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS03620 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS03620 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site PAJ_RS03620 IPR022278 Phosphoserine aminotransferase PAJ_RS03625 IPR001986 Enolpyruvate transferase domain PAJ_RS03625 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase PAJ_RS03625 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta PAJ_RS03625 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site PAJ_RS03630 IPR003136 Cytidylate kinase PAJ_RS03630 IPR011994 Cytidylate kinase domain PAJ_RS03630 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03635 IPR000110 Ribosomal protein S1 PAJ_RS03635 IPR003029 Ribosomal protein S1, RNA-binding domain PAJ_RS03635 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS03635 IPR022967 RNA-binding domain, S1 PAJ_RS03640 IPR000119 Histone-like bacterial DNA-binding protein PAJ_RS03640 IPR005685 Integration host factor, beta subunit PAJ_RS03640 IPR010992 Integration host factor (IHF)-like DNA-binding domain PAJ_RS03640 IPR020816 Histone-like DNA-binding protein, conserved site PAJ_RS03645 IPR001279 Beta-lactamase-like PAJ_RS03645 IPR004477 ComEC/Rec2-related protein PAJ_RS03645 IPR004797 Competence protein ComEC/Rec2 PAJ_RS03650 IPR003439 ABC transporter-like PAJ_RS03650 IPR003593 AAA+ ATPase domain PAJ_RS03650 IPR011527 ABC transporter type 1, transmembrane domain PAJ_RS03650 IPR011917 ABC transporter, lipid A export, MsbA PAJ_RS03650 IPR017871 ABC transporter, conserved site PAJ_RS03650 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03655 IPR003758 Tetraacyldisaccharide 4'-kinase PAJ_RS03655 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03660 IPR009351 Protein of unknown function DUF1006 PAJ_RS03665 IPR005651 Uncharacterised protein family UPF0434/Trm112 PAJ_RS03670 IPR003329 Acylneuraminate cytidylyltransferase PAJ_RS03670 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase PAJ_RS03670 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS03675 IPR003848 Domain of unknown function DUF218 PAJ_RS03675 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS03680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS03685 IPR005582 Chromosome partition protein MukF PAJ_RS03685 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS03685 IPR033439 PAJ_RS03685 PAJ_RS03685 IPR033440 PAJ_RS03685 PAJ_RS03685 IPR033441 PAJ_RS03685 PAJ_RS03690 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE PAJ_RS03695 IPR007406 MukB, N-terminal domain PAJ_RS03695 IPR012090 Chromosome partition protein MukB PAJ_RS03695 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03695 IPR032520 PAJ_RS03695 PAJ_RS03700 IPR002477 Peptidoglycan binding-like PAJ_RS03700 IPR005490 L,D-transpeptidase catalytic domain PAJ_RS03705 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain PAJ_RS03705 IPR010275 Protein of unknown function DUF882 PAJ_RS03710 IPR001279 Beta-lactamase-like PAJ_RS03715 IPR000796 Aspartate/other aminotransferase PAJ_RS03715 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site PAJ_RS03715 IPR004839 Aminotransferase, class I/classII PAJ_RS03715 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS03715 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS03720 IPR001702 Porin, Gram-negative type PAJ_RS03720 IPR001897 Porin, gammaproteobacterial PAJ_RS03720 IPR023614 Porin domain PAJ_RS03725 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb PAJ_RS03725 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) PAJ_RS03725 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type PAJ_RS03725 IPR004522 Asparagine-tRNA ligase PAJ_RS03725 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS03725 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like PAJ_RS03730 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal PAJ_RS03730 IPR006406 Nicotinate phosphoribosyltransferase PAJ_RS03730 IPR007229 Nicotinate phosphoribosyltransferase family PAJ_RS03735 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase PAJ_RS03735 IPR012779 Peptidase M1, alanyl aminopeptidase PAJ_RS03735 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal PAJ_RS03735 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal PAJ_RS03740 IPR003439 ABC transporter-like PAJ_RS03740 IPR003593 AAA+ ATPase domain PAJ_RS03740 IPR017871 ABC transporter, conserved site PAJ_RS03740 IPR017875 ABC transporter, aliphatic sulphonate import, ATP-binding protein PAJ_RS03740 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03745 IPR000515 MetI-like domain PAJ_RS03750 IPR011251 Luciferase-like domain PAJ_RS03750 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent PAJ_RS03755 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS03755 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates PAJ_RS03755 IPR015168 SsuA/THI5-like PAJ_RS03760 IPR005025 NADPH-dependent FMN reductase-like PAJ_RS03760 IPR020048 NADPH-dependent FMN reductase, SsuE PAJ_RS03760 IPR029039 Flavoprotein-like PAJ_RS03765 IPR001173 Glycosyltransferase 2-like PAJ_RS03765 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS03770 IPR002797 Polysaccharide biosynthesis protein PAJ_RS03770 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain PAJ_RS03775 IPR001295 Dihydroorotate dehydrogenase, conserved site PAJ_RS03775 IPR005719 Dihydroorotate dehydrogenase, class 2 PAJ_RS03775 IPR005720 Dihydroorotate dehydrogenase domain PAJ_RS03775 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 PAJ_RS03775 IPR013785 Aldolase-type TIM barrel PAJ_RS03780 IPR009809 Cell division protein ZapC PAJ_RS03785 IPR001041 2Fe-2S ferredoxin-type domain PAJ_RS03785 IPR005302 Molybdenum cofactor sulfurase, C-terminal PAJ_RS03785 IPR005303 MOSC, N-terminal beta barrel PAJ_RS03785 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PAJ_RS03785 IPR011037 Pyruvate kinase-like, insert domain PAJ_RS03785 IPR012675 Beta-grasp domain PAJ_RS03790 IPR000241 Putative RNA methylase domain PAJ_RS03790 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PAJ_RS03790 IPR004114 THUMP PAJ_RS03790 IPR017244 Ribosomal RNA large subunit methyltransferase K/L PAJ_RS03790 IPR019614 S-adenosylmethionine-dependent methyltransferase PAJ_RS03790 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS03795 IPR003439 ABC transporter-like PAJ_RS03795 IPR003593 AAA+ ATPase domain PAJ_RS03795 IPR017871 ABC transporter, conserved site PAJ_RS03795 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03795 IPR032524 PAJ_RS03795 PAJ_RS03795 IPR032781 PAJ_RS03795 PAJ_RS03800 IPR005219 Conserved hypothetical protein CHP00155 PAJ_RS03800 IPR007498 Paraquat-inducible protein A PAJ_RS03805 IPR003399 Mammalian cell entry-related PAJ_RS03810 IPR005586 Protein of unknown function DUF330 PAJ_RS03815 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA PAJ_RS03815 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ PAJ_RS03815 IPR029069 HotDog domain PAJ_RS03820 IPR008269 Peptidase S16, Lon C-terminal PAJ_RS03820 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAJ_RS03820 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS03820 IPR027065 Lon protease PAJ_RS03825 IPR009390 Macrodomain Ter protein, MatP PAJ_RS03830 IPR000498 Outer membrane protein, OmpA-like, transmembrane domain PAJ_RS03830 IPR002368 Outer membrane protein, OmpA PAJ_RS03830 IPR006664 Outer membrane protein, bacterial PAJ_RS03830 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal PAJ_RS03830 IPR006690 Outer membrane protein, OmpA-like, conserved site PAJ_RS03830 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel PAJ_RS03835 IPR004596 Cell division suppressor protein, SulA PAJ_RS03835 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03840 IPR007076 TfoX, N-terminal PAJ_RS03840 IPR007077 TfoX, C-terminal PAJ_RS03840 IPR026256 Transcriptional regulator, TfoX/Sxy-type PAJ_RS03845 IPR010019 Integral membrane protein, YccS PAJ_RS03845 IPR010020 Integral membrane protein, YccS/YhfK PAJ_RS03845 IPR032692 PAJ_RS03845 PAJ_RS03850 IPR005185 Protein of unknown function DUF307 PAJ_RS03850 IPR031308 PAJ_RS03850 PAJ_RS03855 IPR000212 DNA helicase, UvrD/REP type PAJ_RS03855 IPR014016 UvrD-like Helicase, ATP-binding domain PAJ_RS03855 IPR014017 DNA helicase, UvrD-like, C-terminal PAJ_RS03855 IPR022161 DNA helicase IV, N-terminal domain PAJ_RS03855 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS03860 IPR004363 Methylglyoxal synthase PAJ_RS03860 IPR011607 Methylglyoxal synthase-like domain PAJ_RS03860 IPR018148 Methylglyoxal synthase, active site PAJ_RS03865 IPR018635 Uncharacterised protein family UPF0319 PAJ_RS03870 IPR003781 CoA-binding PAJ_RS03870 IPR016040 NAD(P)-binding domain PAJ_RS03875 IPR011722 Hemimethylated DNA-binding domain PAJ_RS03875 IPR022866 Heat shock protein HspQ PAJ_RS03880 IPR002478 PUA domain PAJ_RS03880 IPR015947 PUA-like domain PAJ_RS03880 IPR019614 S-adenosylmethionine-dependent methyltransferase PAJ_RS03880 IPR023542 rRNA large subunit methyltransferase I PAJ_RS03880 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS03885 IPR001792 Acylphosphatase-like domain PAJ_RS03885 IPR017968 Acylphosphatase, conserved site PAJ_RS03885 IPR028627 Acylphosphatase, bacteria PAJ_RS03890 IPR007453 Sulphur transfer protein DsrC/TusE PAJ_RS03890 IPR025526 DsrC-like domain PAJ_RS03895 IPR006213 Bax inhibitor 1, conserved site PAJ_RS03895 IPR006214 Bax inhibitor 1-related PAJ_RS03910 IPR000560 Histidine phosphatase superfamily, clade-2 PAJ_RS03910 IPR029033 Histidine phosphatase superfamily PAJ_RS03910 IPR033379 PAJ_RS03910 PAJ_RS03915 IPR015590 Aldehyde dehydrogenase domain PAJ_RS03915 IPR016160 Aldehyde dehydrogenase, cysteine active site PAJ_RS03915 IPR016161 Aldehyde/histidinol dehydrogenase PAJ_RS03915 IPR016162 Aldehyde dehydrogenase, N-terminal PAJ_RS03915 IPR016163 Aldehyde dehydrogenase, C-terminal PAJ_RS03915 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PAJ_RS03920 IPR025600 YccJ-like protein PAJ_RS03925 IPR005025 NADPH-dependent FMN reductase-like PAJ_RS03925 IPR010089 Flavoprotein WrbA PAJ_RS03925 IPR029039 Flavoprotein-like PAJ_RS03930 IPR000620 Drug/metabolite transporter PAJ_RS03935 IPR001647 DNA-binding HTH domain, TetR-type PAJ_RS03935 IPR009057 Homeodomain-like PAJ_RS03935 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAJ_RS03935 IPR013573 Transcription regulator YcdC, C-terminal PAJ_RS03935 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal PAJ_RS03940 IPR007404 Protein of unknown function DUF457 PAJ_RS03950 IPR009683 Extensin-like, C-terminal PAJ_RS03960 IPR000792 Transcription regulator LuxR, C-terminal PAJ_RS03960 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PAJ_RS03960 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS03960 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS03965 IPR001690 Autoinducer synthesis protein PAJ_RS03965 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS03970 IPR019705 Protein of unknown function DUF2594 PAJ_RS03975 IPR000792 Transcription regulator LuxR, C-terminal PAJ_RS03975 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS03975 IPR011006 CheY-like superfamily PAJ_RS03975 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS03975 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS03980 IPR000305 GIY-YIG nuclease superfamily PAJ_RS03980 IPR001162 UvrC family homology region PAJ_RS03980 IPR001943 UVR domain PAJ_RS03980 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 PAJ_RS03980 IPR004791 UvrABC system, subunit C PAJ_RS03980 IPR010994 RuvA domain 2-like PAJ_RS03980 IPR027299 GIY-YIG domain PAJ_RS03985 IPR000462 CDP-alcohol phosphatidyltransferase PAJ_RS03985 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PAJ_RS03985 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial PAJ_RS04005 IPR002104 Integrase, catalytic PAJ_RS04005 IPR011010 DNA breaking-rejoining enzyme, catalytic core PAJ_RS04005 IPR013762 Integrase-like, catalytic core PAJ_RS04005 IPR023109 Integrase/recombinase, N-terminal PAJ_RS04035 IPR001387 Cro/C1-type helix-turn-helix domain PAJ_RS04035 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS04035 IPR015927 Peptidase S24/S26A/S26B/S26C PAJ_RS04035 IPR019759 Peptidase S24/S26A/S26B PAJ_RS04035 IPR028360 Peptidase S24/S26, beta-ribbon domain PAJ_RS04040 IPR001387 Cro/C1-type helix-turn-helix domain PAJ_RS04040 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS04045 IPR029024 TerB-like PAJ_RS04050 IPR011741 Phage conserved hypothetical protein, C-terminal PAJ_RS04055 IPR001034 HTH DeoR N-terminal domain PAJ_RS04055 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS04055 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 PAJ_RS04060 IPR003115 ParB/Sulfiredoxin PAJ_RS04070 IPR005039 Antirepressor protein, C-terminal PAJ_RS04070 IPR014054 Bacteriophage regulatory protein, Rha family PAJ_RS04075 IPR003615 HNH nuclease PAJ_RS04075 IPR010373 Protein of unknown function DUF968 PAJ_RS04080 IPR010534 Bacteriophage 933W, GpQ PAJ_RS04090 IPR006481 Bacteriophage lambda, GpS, holin PAJ_RS04095 IPR002196 Glycoside hydrolase, family 24 PAJ_RS04095 IPR023346 Lysozyme-like domain PAJ_RS04095 IPR023347 Lysozyme domain PAJ_RS04110 IPR001387 Cro/C1-type helix-turn-helix domain PAJ_RS04110 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS04115 IPR003708 Bacterial protein export chaperone SecB PAJ_RS04130 IPR006448 Putative phage terminase, small subunit, P27 family PAJ_RS04135 IPR005021 Phage terminase PAJ_RS04140 IPR006427 Phage portal protein, HK97 PAJ_RS04140 IPR006944 Bacteriophage/Gene transfer agent portal protein PAJ_RS04145 IPR001907 ATP-dependent Clp protease proteolytic subunit PAJ_RS04145 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PAJ_RS04145 IPR029045 ClpP/crotonase-like domain PAJ_RS04150 IPR006444 Phage major capsid protein, HK97 PAJ_RS04150 IPR024455 Phage capsid PAJ_RS04155 IPR006450 Phage protein of unkonwn function PAJ_RS04155 IPR021146 Phage gp6-like head-tail connector protein PAJ_RS04160 IPR008767 Bacteriophage SPP1, head-tail adaptor PAJ_RS04170 IPR010064 Bacteriophage HK97-gp10, putative tail-component PAJ_RS04175 IPR032493 PAJ_RS04175 PAJ_RS04180 IPR024410 Protein of unknown function DUF3647 PAJ_RS04190 IPR010265 Bacteriophage lambda, GpM, minor tail PAJ_RS04195 IPR006487 Bacteriophage lambda, GpL, minor tail PAJ_RS04200 IPR000064 Endopeptidase, NLPC/P60 domain PAJ_RS04200 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain PAJ_RS04200 IPR028090 JAB domain, prokaryotic PAJ_RS04205 IPR010654 Bacteriophage lambda tail assembly I PAJ_RS04210 IPR003961 Fibronectin, type III PAJ_RS04210 IPR013783 Immunoglobulin-like fold PAJ_RS04210 IPR015406 Domain of unknown function DUF1983 PAJ_RS04210 IPR032876 PAJ_RS04210 PAJ_RS04225 IPR030392 PAJ_RS04225 PAJ_RS04235 IPR001126 DNA-repair protein, UmuC-like PAJ_RS04235 IPR017961 DNA polymerase, Y-family, little finger domain PAJ_RS04235 IPR025188 Domain of unknown function DUF4113 PAJ_RS04250 IPR025424 YrhK domain PAJ_RS04265 IPR001902 Sulphate anion transporter PAJ_RS04265 IPR002645 STAS domain PAJ_RS04265 IPR011547 Sulphate transporter PAJ_RS04270 IPR024753 Regulatory protein AriR PAJ_RS04275 IPR017021 Uncharacterised conserved protein UCP033763 PAJ_RS04275 IPR018988 Protein of unknown function DUF2000 PAJ_RS04275 IPR023476 Peptidyl-tRNA hydrolase II domain PAJ_RS04280 IPR003313 AraC-type arabinose-binding/dimerisation domain PAJ_RS04280 IPR009057 Homeodomain-like PAJ_RS04280 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS04285 IPR000835 MarR-type HTH domain PAJ_RS04285 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS04295 IPR006143 RND efflux pump, membrane fusion protein PAJ_RS04295 IPR032317 PAJ_RS04295 PAJ_RS04300 IPR003423 Outer membrane efflux protein PAJ_RS04300 IPR010131 RND efflux system, outer membrane lipoprotein, NodT PAJ_RS04305 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS04305 IPR017853 Glycoside hydrolase, superfamily PAJ_RS04310 IPR001736 Phospholipase D/Transphosphatidylase PAJ_RS04310 IPR025202 Phospholipase D-like domain PAJ_RS04315 IPR002656 Acyltransferase 3 PAJ_RS04320 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal PAJ_RS04320 IPR011013 Galactose mutarotase-like domain PAJ_RS04320 IPR013783 Immunoglobulin-like fold PAJ_RS04320 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D PAJ_RS04320 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup PAJ_RS04320 IPR014756 Immunoglobulin E-set PAJ_RS04320 IPR023704 Glucan biosynthesis protein G PAJ_RS04325 IPR001173 Glycosyltransferase 2-like PAJ_RS04325 IPR023725 Glucan biosynthesis glucosyltransferase H PAJ_RS04325 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS04330 IPR010780 Protein of unknown function DUF1375 PAJ_RS04335 IPR025729 MsyB protein PAJ_RS04345 IPR011701 Major facilitator superfamily PAJ_RS04345 IPR020846 Major facilitator superfamily domain PAJ_RS04350 IPR001647 DNA-binding HTH domain, TetR-type PAJ_RS04350 IPR009057 Homeodomain-like PAJ_RS04350 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAJ_RS04350 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal PAJ_RS04360 IPR001763 Rhodanese-like domain PAJ_RS04360 IPR020936 Uncharacterised protein family UPF0176 PAJ_RS04360 IPR022111 Protein of unknown function DUF3650 PAJ_RS04365 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PAJ_RS04365 IPR023480 Uncharacterised protein family UPF0312/YceI PAJ_RS04370 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase PAJ_RS04370 IPR016174 Di-haem cytochrome, transmembrane PAJ_RS04380 IPR006076 FAD dependent oxidoreductase PAJ_RS04380 IPR023493 N-methyl-L-tryptophan oxidase MTOX PAJ_RS04380 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS04385 IPR025730 Biofilm regulator BssS PAJ_RS04395 IPR010391 DNA damage-inducible protein DinI-like PAJ_RS04400 IPR002195 Dihydroorotase, conserved site PAJ_RS04400 IPR004721 Dihydroorotase homodimeric type PAJ_RS04400 IPR006680 Amidohydrolase 1 PAJ_RS04400 IPR032466 PAJ_RS04400 PAJ_RS04405 IPR010835 Protein of unknown function DUF1439 PAJ_RS04410 IPR000182 GNAT domain PAJ_RS04410 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS04415 IPR007432 Protein of unknown function DUF480 PAJ_RS04415 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS04420 IPR000683 Oxidoreductase, N-terminal PAJ_RS04420 IPR016040 NAD(P)-binding domain PAJ_RS04425 IPR004268 Flagellin assembly, membrane protein MviN PAJ_RS04430 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding PAJ_RS04430 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS04430 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS04430 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PAJ_RS04435 IPR007809 FlgN-like domain PAJ_RS04440 IPR007412 Anti-sigma-28 factor, FlgM PAJ_RS04440 IPR031316 PAJ_RS04440 PAJ_RS04445 IPR013974 SAF domain PAJ_RS04445 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal PAJ_RS04450 IPR001444 Flagellar basal body rod protein, N-terminal PAJ_RS04450 IPR006300 Flagellar basal-body rod protein FlgB PAJ_RS04450 IPR019776 Flagellar basal body rod protein, conserved site PAJ_RS04455 IPR001444 Flagellar basal body rod protein, N-terminal PAJ_RS04455 IPR006299 Flagellar basal-body rod protein FlgC PAJ_RS04455 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PAJ_RS04455 IPR019776 Flagellar basal body rod protein, conserved site PAJ_RS04460 IPR005648 Flagellar hook capping protein PAJ_RS04460 IPR025963 FlgD Tudor-like domain PAJ_RS04460 IPR025965 FlgD Ig-like domain PAJ_RS04465 IPR001444 Flagellar basal body rod protein, N-terminal PAJ_RS04465 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PAJ_RS04465 IPR011491 Flagellar basal body FlaE PAJ_RS04465 IPR019776 Flagellar basal body rod protein, conserved site PAJ_RS04465 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PAJ_RS04470 IPR001444 Flagellar basal body rod protein, N-terminal PAJ_RS04470 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PAJ_RS04470 IPR019776 Flagellar basal body rod protein, conserved site PAJ_RS04470 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PAJ_RS04475 IPR001444 Flagellar basal body rod protein, N-terminal PAJ_RS04475 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PAJ_RS04475 IPR012834 Flagellar basal-body rod FlgG PAJ_RS04475 IPR019776 Flagellar basal body rod protein, conserved site PAJ_RS04475 IPR020013 Fagellar hook-basal body protein, FlgE/F/G PAJ_RS04480 IPR000527 Flagellar L-ring protein PAJ_RS04485 IPR001782 Flagellar P-ring protein PAJ_RS04490 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain PAJ_RS04490 IPR013377 Flagellar rod assembly protein/muramidase FlgJ PAJ_RS04490 IPR019301 Flagellar protein FlgJ, N-terminal PAJ_RS04495 IPR001444 Flagellar basal body rod protein, N-terminal PAJ_RS04495 IPR002371 Flagellar hook-associated protein, FlgK PAJ_RS04495 IPR010930 Flagellar basal-body/hook protein, C-terminal domain PAJ_RS04500 IPR001029 Flagellin, D0/D1 domain PAJ_RS04500 IPR013384 Flagellar hook-associated protein 3 PAJ_RS04505 IPR003029 Ribosomal protein S1, RNA-binding domain PAJ_RS04505 IPR004659 Ribonuclease E/G PAJ_RS04505 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS04505 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G PAJ_RS04505 IPR021968 Polyribonucleotide phosphorylase C-terminal PAJ_RS04505 IPR022967 RNA-binding domain, S1 PAJ_RS04505 IPR028878 Ribonuclease E PAJ_RS04510 IPR002942 RNA-binding S4 domain PAJ_RS04510 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F PAJ_RS04510 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PAJ_RS04510 IPR006225 Pseudouridine synthase, RluC/RluD PAJ_RS04510 IPR020103 Pseudouridine synthase, catalytic domain PAJ_RS04515 IPR003697 Maf-like protein PAJ_RS04515 IPR029001 Inosine triphosphate pyrophosphatase-like PAJ_RS04520 IPR003772 Protein of unknown function DUF177 PAJ_RS04525 IPR002677 Ribosomal protein L32p PAJ_RS04525 IPR011332 Zinc-binding ribosomal protein PAJ_RS04530 IPR003664 Fatty acid synthesis PlsX protein PAJ_RS04530 IPR012281 Phospholipid biosynthesis protein, PlsX-like PAJ_RS04530 IPR024084 Isopropylmalate dehydrogenase-like domain PAJ_RS04535 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 PAJ_RS04535 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal PAJ_RS04535 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PAJ_RS04535 IPR016039 Thiolase-like PAJ_RS04540 IPR001227 Acyl transferase domain PAJ_RS04540 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type PAJ_RS04540 IPR014043 Acyl transferase PAJ_RS04540 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PAJ_RS04540 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding PAJ_RS04540 IPR020801 Polyketide synthase, acyl transferase domain PAJ_RS04540 IPR024925 Malonyl CoA-acyl carrier protein transacylase PAJ_RS04545 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS04545 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase PAJ_RS04545 IPR016040 NAD(P)-binding domain PAJ_RS04545 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS04550 IPR003231 Acyl carrier protein (ACP) PAJ_RS04550 IPR006162 Phosphopantetheine attachment site PAJ_RS04550 IPR009081 Acyl carrier protein-like PAJ_RS04555 IPR014030 Beta-ketoacyl synthase, N-terminal PAJ_RS04555 IPR014031 Beta-ketoacyl synthase, C-terminal PAJ_RS04555 IPR016039 Thiolase-like PAJ_RS04555 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 PAJ_RS04555 IPR018201 Beta-ketoacyl synthase, active site PAJ_RS04555 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PAJ_RS04560 IPR001544 Aminotransferase, class IV PAJ_RS04560 IPR017824 Aminodeoxychorismate lyase, class IV PAJ_RS04560 IPR018300 Aminotransferase, class IV, conserved site PAJ_RS04565 IPR003770 Uncharacterised protein family UPF0755, YceG-like PAJ_RS04565 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain PAJ_RS04570 IPR018094 Thymidylate kinase PAJ_RS04570 IPR018095 Thymidylate kinase, conserved site PAJ_RS04570 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS04575 IPR004622 DNA polymerase III, delta prime subunit PAJ_RS04575 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal PAJ_RS04575 IPR015199 DNA polymerase III, delta subunit, C-terminal PAJ_RS04575 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS04580 IPR001130 TatD family PAJ_RS04580 IPR015991 Uncharacterised deoxyribonuclease TatD-type PAJ_RS04580 IPR018228 Deoxyribonuclease, TatD-related, conserved site PAJ_RS04580 IPR032466 PAJ_RS04580 PAJ_RS04585 IPR001996 Phosphotransferase system, IIB component, type 1 PAJ_RS04585 IPR003352 Phosphotransferase system, EIIC PAJ_RS04585 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component PAJ_RS04585 IPR011299 PTS system glucose-specific IIBC component PAJ_RS04585 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site PAJ_RS04590 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS04590 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS04590 IPR024478 4HB MCP domain PAJ_RS04595 IPR001310 Histidine triad (HIT) protein PAJ_RS04595 IPR011146 HIT-like domain PAJ_RS04595 IPR019808 Histidine triad, conserved site PAJ_RS04600 IPR010824 Protein of unknown function DUF1425 PAJ_RS04605 IPR014094 Penicillin-binding protein activator LpoB PAJ_RS04610 IPR002575 Aminoglycoside phosphotransferase PAJ_RS04610 IPR011009 Protein kinase-like domain PAJ_RS04615 IPR001764 Glycoside hydrolase, family 3, N-terminal PAJ_RS04615 IPR017853 Glycoside hydrolase, superfamily PAJ_RS04615 IPR019800 Glycoside hydrolase, family 3, active site PAJ_RS04615 IPR022956 Beta-hexosaminidase, bacterial PAJ_RS04620 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA PAJ_RS04620 IPR022987 Uncharacterised protein family UPF0227 PAJ_RS04625 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS04630 IPR008816 Glycine zipper 2TM domain PAJ_RS04635 IPR000835 MarR-type HTH domain PAJ_RS04635 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS04640 IPR003779 Carboxymuconolactone decarboxylase-like PAJ_RS04640 IPR004675 Alkylhydroperoxidase AhpD core PAJ_RS04640 IPR029032 AhpD-like PAJ_RS04645 IPR001650 Helicase, C-terminal PAJ_RS04645 IPR003711 CarD-like/TRCF domain PAJ_RS04645 IPR004576 Transcription-repair coupling factor PAJ_RS04645 IPR005118 Transcription-repair-coupling factor, C-terminal domain PAJ_RS04645 IPR011545 DEAD/DEAH box helicase domain PAJ_RS04645 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS04645 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS04650 IPR003838 Permease FtsX-like PAJ_RS04650 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family PAJ_RS04650 IPR025857 MacB-like periplasmic core domain PAJ_RS04660 IPR003838 Permease FtsX-like PAJ_RS04660 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family PAJ_RS04660 IPR011926 Lipoprotein releasing system, transmembrane protein LolE PAJ_RS04660 IPR025857 MacB-like periplasmic core domain PAJ_RS04665 IPR003000 Sirtuin family PAJ_RS04665 IPR026591 Sirtuin family, catalytic core small domain PAJ_RS04665 IPR027546 Sirtuin, class III PAJ_RS04665 IPR029035 DHS-like NAD/FAD-binding domain PAJ_RS04670 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site PAJ_RS04670 IPR002933 Peptidase M20 PAJ_RS04670 IPR010161 Peptidase M20B, tripeptide aminopeptidase PAJ_RS04670 IPR011650 Peptidase M20, dimerisation domain PAJ_RS04675 IPR003347 JmjC domain PAJ_RS04680 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS04680 IPR003660 HAMP linker domain PAJ_RS04680 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS04680 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS04680 IPR015014 PhoQ Sensor PAJ_RS04685 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS04685 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS04685 IPR011006 CheY-like superfamily PAJ_RS04685 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS04690 IPR000362 Fumarate lyase family PAJ_RS04690 IPR004769 Adenylosuccinate lyase PAJ_RS04690 IPR008948 L-Aspartase-like PAJ_RS04690 IPR013539 Adenylosuccinate lyase PurB, C-terminal PAJ_RS04690 IPR020557 Fumarate lyase, conserved site PAJ_RS04690 IPR022761 Fumarate lyase, N-terminal PAJ_RS04690 IPR024083 Fumarase/histidase, N-terminal PAJ_RS04695 IPR007451 Uncharacterised protein family UPF0274 PAJ_RS04700 IPR004506 tRNA-specific 2-thiouridylase PAJ_RS04700 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS04700 IPR023382 Adenine nucleotide alpha hydrolase-like domains PAJ_RS04705 IPR000086 NUDIX hydrolase domain PAJ_RS04705 IPR015797 NUDIX hydrolase domain-like PAJ_RS04705 IPR020084 NUDIX hydrolase, conserved site PAJ_RS04705 IPR020476 NUDIX hydrolase PAJ_RS04710 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PAJ_RS04710 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F PAJ_RS04710 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PAJ_RS04710 IPR020103 Pseudouridine synthase, catalytic domain PAJ_RS04715 IPR001804 Isocitrate and isopropylmalate dehydrogenases family PAJ_RS04715 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic PAJ_RS04715 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site PAJ_RS04715 IPR024084 Isopropylmalate dehydrogenase-like domain PAJ_RS04735 IPR001829 Pili assembly chaperone, bacterial PAJ_RS04735 IPR008962 PapD-like PAJ_RS04735 IPR016147 PapD, N-terminal, bacterial PAJ_RS04735 IPR016148 Pili assembly chaperone, C-terminal domain PAJ_RS04735 IPR018046 Pili assembly chaperone, conserved site PAJ_RS04740 IPR000259 Fimbrial-type adhesion domain PAJ_RS04740 IPR008966 Adhesion domain PAJ_RS04740 IPR011228 Uncharacterised conserved protein UCP029766 PAJ_RS04745 IPR000015 Outer membrane usher protein PAJ_RS04745 IPR018030 Fimbrial membrane usher, conserved site PAJ_RS04745 IPR025885 PapC, N-terminal domain PAJ_RS04745 IPR025949 PapC-like, C-terminal domain PAJ_RS04750 IPR001829 Pili assembly chaperone, bacterial PAJ_RS04750 IPR008962 PapD-like PAJ_RS04750 IPR016147 PapD, N-terminal, bacterial PAJ_RS04750 IPR016148 Pili assembly chaperone, C-terminal domain PAJ_RS04755 IPR000259 Fimbrial-type adhesion domain PAJ_RS04755 IPR008966 Adhesion domain PAJ_RS04775 IPR002938 Monooxygenase, FAD-binding PAJ_RS04775 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS04780 IPR001647 DNA-binding HTH domain, TetR-type PAJ_RS04780 IPR009057 Homeodomain-like PAJ_RS04780 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal PAJ_RS04785 IPR001647 DNA-binding HTH domain, TetR-type PAJ_RS04785 IPR009057 Homeodomain-like PAJ_RS04785 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal PAJ_RS04785 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PAJ_RS04790 IPR003423 Outer membrane efflux protein PAJ_RS04790 IPR010131 RND efflux system, outer membrane lipoprotein, NodT PAJ_RS04795 IPR001036 Acriflavin resistance protein PAJ_RS04795 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 PAJ_RS04795 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAJ_RS04800 IPR006143 RND efflux pump, membrane fusion protein PAJ_RS04800 IPR032317 PAJ_RS04800 PAJ_RS04810 IPR004740 Nucleoside:H+ symporter PAJ_RS04810 IPR020846 Major facilitator superfamily domain PAJ_RS04815 IPR005502 ADP-ribosylation/Crystallin J1 PAJ_RS04820 IPR002139 Ribokinase PAJ_RS04820 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PAJ_RS04820 IPR011611 Carbohydrate kinase PfkB PAJ_RS04820 IPR029056 Ribokinase-like PAJ_RS04825 IPR000524 Transcription regulator HTH, GntR PAJ_RS04825 IPR011663 UbiC transcription regulator-associated PAJ_RS04825 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS04825 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAJ_RS04830 IPR005828 General substrate transporter PAJ_RS04830 IPR005829 Sugar transporter, conserved site PAJ_RS04830 IPR011701 Major facilitator superfamily PAJ_RS04830 IPR020846 Major facilitator superfamily domain PAJ_RS04835 IPR008462 CsbD-like PAJ_RS04835 IPR010279 Protein of unknown function DUF883, ElaB PAJ_RS04860 IPR000182 GNAT domain PAJ_RS04860 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS04865 IPR001279 Beta-lactamase-like PAJ_RS04870 IPR003507 Muramoyl-tetrapeptide carboxypeptidase PAJ_RS04870 IPR027461 LD-carboxypeptidase A, C-terminal domain PAJ_RS04870 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain PAJ_RS04870 IPR029062 Class I glutamine amidotransferase-like PAJ_RS04875 IPR000189 Prokaryotic transglycosylase, active site PAJ_RS04875 IPR008258 Lytic transglycosylase-like SLT domain PAJ_RS04875 IPR023346 Lysozyme-like domain PAJ_RS04880 IPR007324 Sugar-binding domain, putative PAJ_RS04880 IPR009057 Homeodomain-like PAJ_RS04880 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS04885 IPR005474 Transketolase, N-terminal PAJ_RS04885 IPR029061 Thiamin diphosphate-binding fold PAJ_RS04885 IPR033247 PAJ_RS04885 PAJ_RS04890 IPR005475 Transketolase-like, pyrimidine-binding domain PAJ_RS04890 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II PAJ_RS04890 IPR029061 Thiamin diphosphate-binding fold PAJ_RS04890 IPR033247 PAJ_RS04890 PAJ_RS04890 IPR033248 PAJ_RS04890 PAJ_RS04895 IPR000577 PAJ_RS04895 PAJ_RS04895 IPR018484 Carbohydrate kinase, FGGY, N-terminal PAJ_RS04895 IPR018485 Carbohydrate kinase, FGGY, C-terminal PAJ_RS04900 IPR006685 Mechanosensitive ion channel MscS PAJ_RS04900 IPR010920 Like-Sm (LSM) domain PAJ_RS04900 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 PAJ_RS04900 IPR011066 Mechanosensitive ion channel MscS, C-terminal PAJ_RS04910 IPR007341 Transglycosylase-associated protein PAJ_RS04915 IPR001661 Glycoside hydrolase, family 37 PAJ_RS04915 IPR008928 Six-hairpin glycosidase-like PAJ_RS04915 IPR018232 Glycoside hydrolase, family 37, conserved site PAJ_RS04915 IPR023720 Trehalase, periplasmic PAJ_RS04920 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PAJ_RS04920 IPR016040 NAD(P)-binding domain PAJ_RS04925 IPR003141 Polymerase/histidinol phosphatase, N-terminal PAJ_RS04925 IPR004013 PHP, C-terminal PAJ_RS04925 IPR016195 Polymerase/histidinol phosphatase-like PAJ_RS04925 IPR023710 Probable phosphatase YcdX PAJ_RS04930 IPR020945 DMSO/Nitrate reductase chaperone PAJ_RS04930 IPR026269 Tat proofreading chaperone DmsD-type PAJ_RS04935 IPR003673 CoA-transferase family III PAJ_RS04935 IPR023606 CoA-transferase family III domain PAJ_RS04940 IPR000620 Drug/metabolite transporter PAJ_RS04945 IPR017926 Glutamine amidotransferase PAJ_RS04945 IPR029062 Class I glutamine amidotransferase-like PAJ_RS04950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS04955 IPR015590 Aldehyde dehydrogenase domain PAJ_RS04955 IPR016160 Aldehyde dehydrogenase, cysteine active site PAJ_RS04955 IPR016161 Aldehyde/histidinol dehydrogenase PAJ_RS04955 IPR016162 Aldehyde dehydrogenase, N-terminal PAJ_RS04955 IPR016163 Aldehyde dehydrogenase, C-terminal PAJ_RS04955 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PAJ_RS04965 IPR006045 Cupin 1 PAJ_RS04965 IPR011051 RmlC-like cupin domain PAJ_RS04965 IPR014710 RmlC-like jelly roll fold PAJ_RS04965 IPR017774 Bicupin, oxalate decarboxylase/oxidase PAJ_RS04970 IPR015947 PUA-like domain PAJ_RS04970 IPR027843 Domain of unknown function DUF4440 PAJ_RS04970 IPR032710 PAJ_RS04970 PAJ_RS04975 IPR013094 Alpha/beta hydrolase fold-3 PAJ_RS04975 IPR029058 Alpha/Beta hydrolase fold PAJ_RS04980 IPR001360 Glycoside hydrolase, family 1 PAJ_RS04980 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS04980 IPR017853 Glycoside hydrolase, superfamily PAJ_RS04980 IPR033132 PAJ_RS04980 PAJ_RS04985 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 PAJ_RS04985 IPR001996 Phosphotransferase system, IIB component, type 1 PAJ_RS04985 IPR003352 Phosphotransferase system, EIIC PAJ_RS04985 IPR011055 Duplicated hybrid motif PAJ_RS04985 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component PAJ_RS04985 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site PAJ_RS04990 IPR004341 CAT RNA-binding domain PAJ_RS04990 IPR011608 PRD domain PAJ_RS04995 IPR000847 Transcription regulator HTH, LysR PAJ_RS04995 IPR005119 LysR, substrate-binding PAJ_RS04995 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS05000 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase PAJ_RS05005 IPR018752 Uncharacterised protein family UPF0753 PAJ_RS05010 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal PAJ_RS05010 IPR013785 Aldolase-type TIM barrel PAJ_RS05015 IPR001845 HTH ArsR-type DNA-binding domain PAJ_RS05015 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS05020 IPR000182 GNAT domain PAJ_RS05020 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS05025 IPR000182 GNAT domain PAJ_RS05025 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS05030 IPR002104 Integrase, catalytic PAJ_RS05030 IPR011010 DNA breaking-rejoining enzyme, catalytic core PAJ_RS05030 IPR013762 Integrase-like, catalytic core PAJ_RS05035 IPR003660 HAMP linker domain PAJ_RS05035 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS05035 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS05035 IPR024478 4HB MCP domain PAJ_RS05040 IPR000182 GNAT domain PAJ_RS05040 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS05045 IPR018728 Domain of unknown function DUF2268 PAJ_RS05050 IPR011701 Major facilitator superfamily PAJ_RS05050 IPR020846 Major facilitator superfamily domain PAJ_RS05055 IPR006680 Amidohydrolase 1 PAJ_RS05055 IPR032466 PAJ_RS05055 PAJ_RS05060 IPR002818 ThiJ/PfpI PAJ_RS05060 IPR029062 Class I glutamine amidotransferase-like PAJ_RS05065 IPR002220 DapA-like PAJ_RS05065 IPR013785 Aldolase-type TIM barrel PAJ_RS05070 IPR000531 TonB-dependent receptor, beta-barrel PAJ_RS05070 IPR010105 TonB-dependent siderophore receptor PAJ_RS05070 IPR010917 TonB-dependent receptor, conserved site PAJ_RS05070 IPR012910 TonB-dependent receptor, plug PAJ_RS05075 IPR003313 AraC-type arabinose-binding/dimerisation domain PAJ_RS05075 IPR009057 Homeodomain-like PAJ_RS05075 IPR011051 RmlC-like cupin domain PAJ_RS05075 IPR014710 RmlC-like jelly roll fold PAJ_RS05075 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS05090 IPR000120 Amidase PAJ_RS05090 IPR020556 Amidase, conserved site PAJ_RS05090 IPR023631 Amidase signature domain PAJ_RS05095 IPR001647 DNA-binding HTH domain, TetR-type PAJ_RS05095 IPR009057 Homeodomain-like PAJ_RS05095 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAJ_RS05095 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal PAJ_RS05110 IPR001387 Cro/C1-type helix-turn-helix domain PAJ_RS05110 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS05110 IPR011051 RmlC-like cupin domain PAJ_RS05110 IPR014710 RmlC-like jelly roll fold PAJ_RS05115 IPR000182 GNAT domain PAJ_RS05115 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS05135 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal PAJ_RS05135 IPR003346 Transposase, IS116/IS110/IS902 PAJ_RS05140 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain PAJ_RS05140 IPR011964 YVTN beta-propeller repeat PAJ_RS05140 IPR015943 WD40/YVTN repeat-like-containing domain PAJ_RS05140 IPR019405 Lactonase, 7-bladed beta propeller PAJ_RS05145 IPR004695 Voltage-dependent anion channel PAJ_RS05150 IPR005122 Uracil-DNA glycosylase-like PAJ_RS05160 IPR029035 DHS-like NAD/FAD-binding domain PAJ_RS05165 IPR000262 FMN-dependent dehydrogenase PAJ_RS05165 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site PAJ_RS05165 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent PAJ_RS05165 IPR013785 Aldolase-type TIM barrel PAJ_RS05175 IPR000182 GNAT domain PAJ_RS05175 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS05180 IPR003719 Phenazine biosynthesis PhzF protein PAJ_RS05185 IPR000182 GNAT domain PAJ_RS05185 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS05190 IPR001387 Cro/C1-type helix-turn-helix domain PAJ_RS05190 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS05190 IPR011051 RmlC-like cupin domain PAJ_RS05190 IPR014710 RmlC-like jelly roll fold PAJ_RS05195 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS05200 IPR000259 Fimbrial-type adhesion domain PAJ_RS05200 IPR008966 Adhesion domain PAJ_RS05205 IPR000259 Fimbrial-type adhesion domain PAJ_RS05205 IPR008966 Adhesion domain PAJ_RS05210 IPR000259 Fimbrial-type adhesion domain PAJ_RS05210 IPR008966 Adhesion domain PAJ_RS05215 IPR000015 Outer membrane usher protein PAJ_RS05215 IPR018030 Fimbrial membrane usher, conserved site PAJ_RS05215 IPR025885 PapC, N-terminal domain PAJ_RS05215 IPR025949 PapC-like, C-terminal domain PAJ_RS05220 IPR001829 Pili assembly chaperone, bacterial PAJ_RS05220 IPR008962 PapD-like PAJ_RS05220 IPR016147 PapD, N-terminal, bacterial PAJ_RS05220 IPR016148 Pili assembly chaperone, C-terminal domain PAJ_RS05220 IPR018046 Pili assembly chaperone, conserved site PAJ_RS05225 IPR000259 Fimbrial-type adhesion domain PAJ_RS05225 IPR008966 Adhesion domain PAJ_RS05230 IPR000259 Fimbrial-type adhesion domain PAJ_RS05230 IPR008966 Adhesion domain PAJ_RS05235 IPR001633 EAL domain PAJ_RS05245 IPR002201 Glycosyl transferase, family 9 PAJ_RS05245 IPR030929 PAJ_RS05245 PAJ_RS05250 IPR005546 Autotransporter beta-domain PAJ_RS05250 IPR011050 Pectin lyase fold/virulence factor PAJ_RS05250 IPR012332 P22 tailspike C-terminal domain-like PAJ_RS05250 IPR024973 ESPR domain PAJ_RS05250 IPR030930 PAJ_RS05250 PAJ_RS05255 IPR000847 Transcription regulator HTH, LysR PAJ_RS05255 IPR005119 LysR, substrate-binding PAJ_RS05255 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS05260 IPR000620 Drug/metabolite transporter PAJ_RS05265 IPR007053 LRAT-like domain PAJ_RS05270 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAJ_RS05275 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PAJ_RS05285 IPR007627 RNA polymerase sigma-70 region 2 PAJ_RS05285 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS05285 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PAJ_RS05285 IPR013324 RNA polymerase sigma factor, region 3/4 PAJ_RS05285 IPR013325 RNA polymerase sigma factor, region 2 PAJ_RS05285 IPR014284 RNA polymerase sigma-70 like domain PAJ_RS05290 IPR011990 Tetratricopeptide-like helical domain PAJ_RS05290 IPR013105 Tetratricopeptide TPR2 PAJ_RS05290 IPR019734 Tetratricopeptide repeat PAJ_RS05295 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase PAJ_RS05295 IPR016174 Di-haem cytochrome, transmembrane PAJ_RS05300 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PAJ_RS05300 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PAJ_RS05300 IPR016040 NAD(P)-binding domain PAJ_RS05305 IPR011051 RmlC-like cupin domain PAJ_RS05305 IPR014710 RmlC-like jelly roll fold PAJ_RS05310 IPR002293 Amino acid/polyamine transporter I PAJ_RS05315 IPR020251 Uncharacterised protein family, YmjA PAJ_RS05330 IPR002711 HNH endonuclease PAJ_RS05330 IPR003615 HNH nuclease PAJ_RS05335 IPR015004 Protein of unknown function DUF1852 PAJ_RS05340 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal PAJ_RS05340 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit PAJ_RS05355 IPR000889 Glutathione peroxidase PAJ_RS05355 IPR012336 Thioredoxin-like fold PAJ_RS05355 IPR029759 Glutathione peroxidase active site PAJ_RS05355 IPR029760 Glutathione peroxidase conserved site PAJ_RS05360 IPR000835 MarR-type HTH domain PAJ_RS05360 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS05360 IPR023187 Transcriptional regulator MarR-type, conserved site PAJ_RS05365 IPR003382 Flavoprotein PAJ_RS05365 IPR004507 Decarboxylase UbiX/Pad1 PAJ_RS05365 IPR032901 PAJ_RS05365 PAJ_RS05370 IPR002830 UbiD decarboxylyase family PAJ_RS05370 IPR012349 FMN-binding split barrel PAJ_RS05370 IPR032902 PAJ_RS05370 PAJ_RS05375 IPR011701 Major facilitator superfamily PAJ_RS05375 IPR020846 Major facilitator superfamily domain PAJ_RS05385 IPR013022 Xylose isomerase-like, TIM barrel domain PAJ_RS05390 IPR003663 Sugar/inositol transporter PAJ_RS05390 IPR005828 General substrate transporter PAJ_RS05390 IPR005829 Sugar transporter, conserved site PAJ_RS05390 IPR020846 Major facilitator superfamily domain PAJ_RS05395 IPR013022 Xylose isomerase-like, TIM barrel domain PAJ_RS05400 IPR000683 Oxidoreductase, N-terminal PAJ_RS05400 IPR004104 Oxidoreductase, C-terminal PAJ_RS05400 IPR016040 NAD(P)-binding domain PAJ_RS05410 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS05410 IPR013702 FIST domain, N-terminal PAJ_RS05410 IPR019494 FIST C domain PAJ_RS05415 IPR001830 Glycosyl transferase, family 20 PAJ_RS05420 IPR000182 GNAT domain PAJ_RS05420 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS05425 IPR000644 CBS domain PAJ_RS05425 IPR006667 SLC41 divalent cation transporters, integral membrane domain PAJ_RS05430 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAJ_RS05440 IPR006119 Resolvase, N-terminal PAJ_RS05445 IPR026866 Uncharacterised chromosomal cassette SCCmec type IVc protein CR006 PAJ_RS05445 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS05450 IPR001584 Integrase, catalytic core PAJ_RS05450 IPR012337 Ribonuclease H-like domain PAJ_RS05450 IPR025948 HTH-like domain PAJ_RS05455 IPR002514 Transposase IS3/IS911family PAJ_RS05455 IPR009057 Homeodomain-like PAJ_RS05460 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 PAJ_RS05460 IPR006073 GTP binding domain PAJ_RS05460 IPR012675 Beta-grasp domain PAJ_RS05460 IPR012676 TGS-like PAJ_RS05460 IPR013029 Domain of unknown function DUF933 PAJ_RS05460 IPR023192 TGS-like domain PAJ_RS05460 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS05465 IPR001328 Peptidyl-tRNA hydrolase PAJ_RS05465 IPR018171 Peptidyl-tRNA hydrolase, conserved site PAJ_RS05470 IPR019698 Protein of unknown function DUF2583 PAJ_RS05475 IPR000160 GGDEF domain PAJ_RS05475 IPR029787 Nucleotide cyclase PAJ_RS05480 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site PAJ_RS05480 IPR005946 Ribose-phosphate diphosphokinase PAJ_RS05480 IPR029057 Phosphoribosyltransferase-like PAJ_RS05480 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain PAJ_RS05485 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase PAJ_RS05485 IPR006204 GHMP kinase N-terminal domain PAJ_RS05485 IPR013750 GHMP kinase, C-terminal domain PAJ_RS05485 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAJ_RS05485 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS05490 IPR004565 Outer membrane lipoprotein LolB PAJ_RS05490 IPR029046 Lipoprotein localisation LolA/LolB/LppX PAJ_RS05495 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase PAJ_RS05495 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PAJ_RS05495 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal PAJ_RS05495 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain PAJ_RS05495 IPR016040 NAD(P)-binding domain PAJ_RS05495 IPR018214 Glutamyl-tRNA reductase, conserved site PAJ_RS05500 IPR000352 Peptide chain release factor class I/class II PAJ_RS05500 IPR004373 Peptide chain release factor 1 PAJ_RS05500 IPR005139 Peptide chain release factor PAJ_RS05500 IPR014720 Double-stranded RNA-binding domain PAJ_RS05505 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PAJ_RS05505 IPR004556 Modification methylase HemK PAJ_RS05505 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific PAJ_RS05505 IPR025714 Methyltransferase domain PAJ_RS05505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS05510 IPR007360 Invasion gene expression up-regulator, SirB PAJ_RS05515 IPR011990 Tetratricopeptide-like helical domain PAJ_RS05515 IPR032698 PAJ_RS05515 PAJ_RS05520 IPR006218 DAHP synthetase I/KDSA PAJ_RS05520 IPR006269 3-deoxy-8-phosphooctulonate synthase PAJ_RS05520 IPR013785 Aldolase-type TIM barrel PAJ_RS05525 IPR004713 Calcium/proton exchanger PAJ_RS05525 IPR004837 Sodium/calcium exchanger membrane region PAJ_RS05530 IPR009317 ChaB PAJ_RS05535 IPR006840 ChaC-like protein PAJ_RS05535 IPR013024 Butirosin biosynthesis, BtrG-like PAJ_RS05540 IPR000719 Protein kinase domain PAJ_RS05540 IPR011009 Protein kinase-like domain PAJ_RS05540 IPR017441 Protein kinase, ATP binding site PAJ_RS05550 IPR001932 Protein phosphatase 2C (PP2C)-like domain PAJ_RS05550 IPR015655 Protein phosphatase 2C PAJ_RS05555 IPR000253 Forkhead-associated (FHA) domain PAJ_RS05555 IPR008984 SMAD/FHA domain PAJ_RS05555 IPR017735 Type VI secretion system, FHA domain-containing protein PAJ_RS05560 IPR017748 Type VI secretion system-associated, BMAA0400 PAJ_RS05565 IPR009612 ImcF-related PAJ_RS05565 IPR017731 Type VI secretion system, IcmF PAJ_RS05565 IPR025743 ImcF-related, N-terminal domain PAJ_RS05565 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS05570 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal PAJ_RS05570 IPR017732 Type IV / VI secretion system, DotU PAJ_RS05580 IPR005561 ANTAR domain PAJ_RS05580 IPR011006 CheY-like superfamily PAJ_RS05580 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS05580 IPR013587 Nitrate/nitrite sensing protein PAJ_RS05590 IPR000515 MetI-like domain PAJ_RS05590 IPR005889 Nitrate transport permease PAJ_RS05595 IPR003439 ABC transporter-like PAJ_RS05595 IPR003593 AAA+ ATPase domain PAJ_RS05595 IPR005890 Nitrate transport ATP-binding subunit C/D PAJ_RS05595 IPR017871 ABC transporter, conserved site PAJ_RS05595 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS05600 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain PAJ_RS05600 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site PAJ_RS05600 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain PAJ_RS05600 IPR007419 BFD-like [2Fe-2S]-binding domain PAJ_RS05600 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB PAJ_RS05600 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD PAJ_RS05600 IPR017941 Rieske [2Fe-2S] iron-sulphur domain PAJ_RS05600 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS05605 IPR006656 Molybdopterin oxidoreductase PAJ_RS05605 IPR006657 Molydopterin dinucleotide-binding domain PAJ_RS05605 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain PAJ_RS05605 IPR007419 BFD-like [2Fe-2S]-binding domain PAJ_RS05605 IPR009010 Aspartate decarboxylase-like domain PAJ_RS05605 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site PAJ_RS05610 IPR000878 Tetrapyrrole methylase PAJ_RS05610 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site PAJ_RS05610 IPR006366 Uroporphyrin-III C-methyltransferase PAJ_RS05610 IPR014776 Tetrapyrrole methylase, subdomain 2 PAJ_RS05610 IPR014777 Tetrapyrrole methylase, subdomain 1 PAJ_RS05615 IPR001034 HTH DeoR N-terminal domain PAJ_RS05615 IPR001969 Aspartic peptidase, active site PAJ_RS05615 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS05615 IPR014036 DeoR C-terminal sensor domain PAJ_RS05620 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS05620 IPR016040 NAD(P)-binding domain PAJ_RS05620 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS05625 IPR025997 Periplasmic binding protein domain PAJ_RS05625 IPR028082 Periplasmic binding protein-like I PAJ_RS05630 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein PAJ_RS05635 IPR003439 ABC transporter-like PAJ_RS05635 IPR003593 AAA+ ATPase domain PAJ_RS05635 IPR017871 ABC transporter, conserved site PAJ_RS05635 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS05640 IPR001851 ABC transporter, permease PAJ_RS05645 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS05645 IPR016040 NAD(P)-binding domain PAJ_RS05645 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS05650 IPR024519 Domain of unknown function DUF3442, intimin/invasin PAJ_RS05655 IPR001702 Porin, Gram-negative type PAJ_RS05655 IPR001897 Porin, gammaproteobacterial PAJ_RS05655 IPR023614 Porin domain PAJ_RS05660 IPR004636 Acetylornithine/Succinylornithine transaminase family PAJ_RS05660 IPR005814 Aminotransferase class-III PAJ_RS05660 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS05660 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS05660 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS05660 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria PAJ_RS05665 IPR007041 Arginine N-succinyltransferase Ast/AOST PAJ_RS05665 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS05665 IPR017650 Arginine N-succinyltransferase AstA PAJ_RS05670 IPR015590 Aldehyde dehydrogenase domain PAJ_RS05670 IPR016160 Aldehyde dehydrogenase, cysteine active site PAJ_RS05670 IPR016161 Aldehyde/histidinol dehydrogenase PAJ_RS05670 IPR016162 Aldehyde dehydrogenase, N-terminal PAJ_RS05670 IPR016163 Aldehyde dehydrogenase, C-terminal PAJ_RS05670 IPR017649 Succinylglutamic semialdehyde dehydrogenase PAJ_RS05670 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PAJ_RS05675 IPR007079 Succinylarginine dihydrolase PAJ_RS05680 IPR007036 Succinylglutamate desuccinylase/aspartoacylase PAJ_RS05680 IPR016681 Succinylglutamate desuccinylase PAJ_RS05685 IPR012899 LTXXQ motif family protein PAJ_RS05690 IPR000305 GIY-YIG nuclease superfamily PAJ_RS05695 IPR000620 Drug/metabolite transporter PAJ_RS05700 IPR003660 HAMP linker domain PAJ_RS05700 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS05700 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS05705 IPR003694 NAD(+) synthetase PAJ_RS05705 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS05705 IPR022310 NAD/GMP synthase PAJ_RS05705 IPR022926 NH(3)-dependent NAD(+) synthetase PAJ_RS05710 IPR004812 Drug resistance transporter Bcr/CmlA subfamily PAJ_RS05710 IPR011701 Major facilitator superfamily PAJ_RS05710 IPR020846 Major facilitator superfamily domain PAJ_RS05715 IPR007450 Lipoprotein SmpA/OmlA PAJ_RS05725 IPR001991 Sodium:dicarboxylate symporter PAJ_RS05730 IPR007404 Protein of unknown function DUF457 PAJ_RS05730 IPR016956 LexA regulated metal-dependent membrane hydrolase, predicted PAJ_RS05735 IPR006439 HAD hydrolase, subfamily IA PAJ_RS05735 IPR023198 Phosphoglycolate phosphatase, domain 2 PAJ_RS05735 IPR023214 HAD-like domain PAJ_RS05740 IPR025229 YniB-like protein PAJ_RS05750 IPR020499 Uncharacterised protein family YdiZ PAJ_RS05750 IPR022597 Protein of unknown function DUF2622 PAJ_RS05755 IPR007433 Protein of unknown function DUF481 PAJ_RS05760 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain PAJ_RS05760 IPR002320 Threonine-tRNA ligase, class IIa PAJ_RS05760 IPR004095 TGS PAJ_RS05760 IPR004154 Anticodon-binding PAJ_RS05760 IPR012675 Beta-grasp domain PAJ_RS05760 IPR012676 TGS-like PAJ_RS05760 IPR012947 Threonyl/alanyl tRNA synthetase, SAD PAJ_RS05760 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain PAJ_RS05765 IPR001288 Translation initiation factor 3 PAJ_RS05765 IPR019813 Translation initiation factor 3, conserved site PAJ_RS05765 IPR019814 Translation initiation factor 3, N-terminal PAJ_RS05765 IPR019815 Translation initiation factor 3, C-terminal PAJ_RS05770 IPR001706 Ribosomal protein L35, non-mitochondrial PAJ_RS05770 IPR018265 Ribosomal protein L35, conserved site PAJ_RS05770 IPR021137 Ribosomal protein L35 PAJ_RS05775 IPR005813 Ribosomal protein L20 PAJ_RS05780 IPR002319 Phenylalanyl-tRNA synthetase PAJ_RS05780 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal PAJ_RS05780 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit PAJ_RS05780 IPR010978 tRNA-binding arm PAJ_RS05780 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial PAJ_RS05785 IPR002547 tRNA-binding domain PAJ_RS05785 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit PAJ_RS05785 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding PAJ_RS05785 IPR005146 B3/B4 tRNA-binding domain PAJ_RS05785 IPR005147 tRNA synthetase, B5-domain PAJ_RS05785 IPR009061 DNA binding domain, putative PAJ_RS05785 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS05785 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 PAJ_RS05790 IPR000119 Histone-like bacterial DNA-binding protein PAJ_RS05790 IPR005684 Integration host factor, alpha subunit PAJ_RS05790 IPR010992 Integration host factor (IHF)-like DNA-binding domain PAJ_RS05790 IPR020816 Histone-like DNA-binding protein, conserved site PAJ_RS05795 IPR000522 ABC transporter, permease protein PAJ_RS05795 IPR029022 ABC transporter, BtuC-like PAJ_RS05800 IPR000889 Glutathione peroxidase PAJ_RS05800 IPR012336 Thioredoxin-like fold PAJ_RS05800 IPR029759 Glutathione peroxidase active site PAJ_RS05800 IPR029760 Glutathione peroxidase conserved site PAJ_RS05805 IPR003439 ABC transporter-like PAJ_RS05805 IPR003593 AAA+ ATPase domain PAJ_RS05805 IPR017871 ABC transporter, conserved site PAJ_RS05805 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS05815 IPR001633 EAL domain PAJ_RS05820 IPR003846 Uncharacterised protein family UPF0061 PAJ_RS05825 IPR006218 DAHP synthetase I/KDSA PAJ_RS05825 IPR006219 DHAP synthase, class 1 PAJ_RS05825 IPR013785 Aldolase-type TIM barrel PAJ_RS05830 IPR005177 Bifunctional kinase-pyrophosphorylase PAJ_RS05830 IPR026530 Phosphoenolpyruvate synthase regulatory protein PAJ_RS05835 IPR000121 PEP-utilising enzyme, C-terminal PAJ_RS05835 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding PAJ_RS05835 IPR006319 Phosphoenolpyruvate synthase PAJ_RS05835 IPR008279 PEP-utilising enzyme, mobile domain PAJ_RS05835 IPR013815 ATP-grasp fold, subdomain 1 PAJ_RS05835 IPR013816 ATP-grasp fold, subdomain 2 PAJ_RS05835 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain PAJ_RS05835 IPR018274 PEP-utilising enzyme, active site PAJ_RS05835 IPR023151 PEP-utilising enzyme, conserved site PAJ_RS05845 IPR002549 Uncharacterised protein family UPF0118 PAJ_RS05850 IPR004113 FAD-linked oxidase, C-terminal PAJ_RS05850 IPR006094 FAD linked oxidase, N-terminal PAJ_RS05850 IPR009051 Alpha-helical ferredoxin PAJ_RS05850 IPR016164 FAD-linked oxidase-like, C-terminal PAJ_RS05850 IPR016166 FAD-binding, type 2 PAJ_RS05850 IPR016167 FAD-binding, type 2, subdomain 1 PAJ_RS05850 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 PAJ_RS05850 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAJ_RS05850 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAJ_RS05860 IPR000361 FeS cluster biogenesis PAJ_RS05860 IPR011298 SUF system FeS cluster assembly, SufA scaffold PAJ_RS05860 IPR016092 FeS cluster insertion protein PAJ_RS05860 IPR017870 FeS cluster insertion, C-terminal, conserved site PAJ_RS05865 IPR000825 SUF system FeS cluster assembly, SufBD PAJ_RS05865 IPR010231 SUF system FeS cluster assembly, SufB PAJ_RS05870 IPR003439 ABC transporter-like PAJ_RS05870 IPR003593 AAA+ ATPase domain PAJ_RS05870 IPR010230 FeS cluster assembly SUF system, ATPase SufC PAJ_RS05870 IPR017871 ABC transporter, conserved site PAJ_RS05870 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS05875 IPR000825 SUF system FeS cluster assembly, SufBD PAJ_RS05875 IPR011542 SUF system FeS cluster assembly, SufD PAJ_RS05880 IPR000192 Aminotransferase class V domain PAJ_RS05880 IPR010970 Cysteine desulfurase, SufS PAJ_RS05880 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS05880 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS05880 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS05880 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site PAJ_RS05885 IPR003808 Fe-S metabolism associated domain, SufE-like PAJ_RS05890 IPR005490 L,D-transpeptidase catalytic domain PAJ_RS05895 IPR006817 Lipoprotein leucine-zipper PAJ_RS05895 IPR016367 Murein-lipoprotein PAJ_RS05900 IPR001697 Pyruvate kinase PAJ_RS05900 IPR011037 Pyruvate kinase-like, insert domain PAJ_RS05900 IPR015793 Pyruvate kinase, barrel PAJ_RS05900 IPR015794 Pyruvate kinase, alpha/beta PAJ_RS05900 IPR015795 Pyruvate kinase, C-terminal PAJ_RS05900 IPR015806 Pyruvate kinase, beta-barrel insert domain PAJ_RS05900 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain PAJ_RS05900 IPR018209 Pyruvate kinase, active site PAJ_RS05920 IPR002528 Multi antimicrobial extrusion protein PAJ_RS05920 IPR022913 Multidrug resistance protein MdtK PAJ_RS05925 IPR001783 Lumazine-binding protein PAJ_RS05925 IPR017938 Riboflavin synthase-like beta-barrel PAJ_RS05925 IPR023366 ATP synthase subunit alpha-like domain PAJ_RS05925 IPR026017 Lumazine-binding domain PAJ_RS05930 IPR003333 Mycolic acid cyclopropane synthase PAJ_RS05930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS05935 IPR004812 Drug resistance transporter Bcr/CmlA subfamily PAJ_RS05935 IPR011701 Major facilitator superfamily PAJ_RS05935 IPR020846 Major facilitator superfamily domain PAJ_RS05940 IPR000847 Transcription regulator HTH, LysR PAJ_RS05940 IPR005119 LysR, substrate-binding PAJ_RS05940 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS05950 IPR000064 Endopeptidase, NLPC/P60 domain PAJ_RS05955 IPR002109 Glutaredoxin PAJ_RS05955 IPR004480 Monothiol glutaredoxin-related PAJ_RS05955 IPR012336 Thioredoxin-like fold PAJ_RS05955 IPR014434 Monothiol glutaredoxin PAJ_RS05960 IPR005987 Ribonuclease T PAJ_RS05960 IPR012337 Ribonuclease H-like domain PAJ_RS05960 IPR013520 Exonuclease, RNase T/DNA polymerase III PAJ_RS05965 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAJ_RS05965 IPR004361 Glyoxalase I PAJ_RS05965 IPR018146 Glyoxalase I, conserved site PAJ_RS05965 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAJ_RS05970 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal PAJ_RS05970 IPR013785 Aldolase-type TIM barrel PAJ_RS05975 IPR001647 DNA-binding HTH domain, TetR-type PAJ_RS05975 IPR009057 Homeodomain-like PAJ_RS05975 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAJ_RS05975 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal PAJ_RS05980 IPR001395 Aldo/keto reductase PAJ_RS05980 IPR020471 Aldo/keto reductase subgroup PAJ_RS05980 IPR023210 NADP-dependent oxidoreductase domain PAJ_RS05985 IPR001424 Superoxide dismutase, copper/zinc binding domain PAJ_RS05985 IPR018152 Superoxide dismutase, copper/zinc, binding site PAJ_RS05985 IPR024134 PAJ_RS05985 PAJ_RS05995 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein PAJ_RS06000 IPR006143 RND efflux pump, membrane fusion protein PAJ_RS06000 IPR032317 PAJ_RS06000 PAJ_RS06005 IPR012451 Protein of unknown function DUF1656 PAJ_RS06010 IPR000835 MarR-type HTH domain PAJ_RS06010 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS06010 IPR023071 Transcriptional regulator, SlyA PAJ_RS06010 IPR023187 Transcriptional regulator MarR-type, conserved site PAJ_RS06015 IPR008816 Glycine zipper 2TM domain PAJ_RS06020 IPR005338 Anhydro-N-acetylmuramic acid kinase PAJ_RS06025 IPR025135 Protein of unknown function DUF4060 PAJ_RS06030 IPR001633 EAL domain PAJ_RS06030 IPR001792 Acylphosphatase-like domain PAJ_RS06030 IPR007024 BLUF domain PAJ_RS06035 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS06035 IPR016040 NAD(P)-binding domain PAJ_RS06035 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS06040 IPR004193 Glycoside hydrolase, family 13, N-terminal PAJ_RS06040 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PAJ_RS06040 IPR011837 Glycogen debranching enzyme, GlgX type PAJ_RS06040 IPR013780 Glycosyl hydrolase, family 13, all-beta PAJ_RS06040 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS06040 IPR013783 Immunoglobulin-like fold PAJ_RS06040 IPR014756 Immunoglobulin E-set PAJ_RS06040 IPR015902 Glycoside hydrolase, family 13 PAJ_RS06040 IPR017853 Glycoside hydrolase, superfamily PAJ_RS06045 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PAJ_RS06045 IPR012767 Malto-oligosyltrehalose synthase PAJ_RS06045 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS06045 IPR013797 Maltooligosyl trehalose synthase, N-terminal PAJ_RS06045 IPR015902 Glycoside hydrolase, family 13 PAJ_RS06045 IPR017853 Glycoside hydrolase, superfamily PAJ_RS06050 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PAJ_RS06050 IPR012768 Malto-oligosyltrehalose trehalohydrolase PAJ_RS06050 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS06050 IPR013783 Immunoglobulin-like fold PAJ_RS06050 IPR014756 Immunoglobulin E-set PAJ_RS06050 IPR015902 Glycoside hydrolase, family 13 PAJ_RS06050 IPR017853 Glycoside hydrolase, superfamily PAJ_RS06050 IPR022567 Domain of unknown function DUF3459 PAJ_RS06055 IPR002226 Catalase haem-binding site PAJ_RS06055 IPR010582 Catalase immune-responsive domain PAJ_RS06055 IPR011614 Catalase core domain PAJ_RS06055 IPR018028 Catalase, mono-functional, haem-containing PAJ_RS06055 IPR020835 Catalase-like domain PAJ_RS06055 IPR024708 Catalase active site PAJ_RS06055 IPR024712 Catalase, mono-functional, haem-containing, clade 2 PAJ_RS06055 IPR029062 Class I glutamine amidotransferase-like PAJ_RS06060 IPR019626 Stress-induced protein, KGG, repeat PAJ_RS06065 IPR004601 UV-endonuclease UvdE PAJ_RS06075 IPR024753 Regulatory protein AriR PAJ_RS06085 IPR015834 Uncharacterised conserved protein UCP016642, glutamine amidotransferase-like PAJ_RS06085 IPR019197 Biotin-protein ligase, N-terminal PAJ_RS06085 IPR029062 Class I glutamine amidotransferase-like PAJ_RS06090 IPR000871 Beta-lactamase, class-A/D PAJ_RS06090 IPR012338 Beta-lactamase/transpeptidase-like PAJ_RS06090 IPR023650 Beta-lactamase, class-A active site PAJ_RS06095 IPR000847 Transcription regulator HTH, LysR PAJ_RS06095 IPR005119 LysR, substrate-binding PAJ_RS06095 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS06100 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS06100 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS06110 IPR006197 Peptidase S24, LexA-like PAJ_RS06110 IPR015927 Peptidase S24/S26A/S26B/S26C PAJ_RS06110 IPR019759 Peptidase S24/S26A/S26B PAJ_RS06110 IPR028360 Peptidase S24/S26, beta-ribbon domain PAJ_RS06115 IPR001126 DNA-repair protein, UmuC-like PAJ_RS06115 IPR017961 DNA polymerase, Y-family, little finger domain PAJ_RS06115 IPR025188 Domain of unknown function DUF4113 PAJ_RS06120 IPR017283 Molecular chaperone Hsp31 and glyoxalase 3 PAJ_RS06120 IPR029062 Class I glutamine amidotransferase-like PAJ_RS06125 IPR001647 DNA-binding HTH domain, TetR-type PAJ_RS06125 IPR009057 Homeodomain-like PAJ_RS06125 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAJ_RS06125 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal PAJ_RS06125 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PAJ_RS06135 IPR024753 Regulatory protein AriR PAJ_RS06145 IPR010305 Protein of unknown function DUF903 PAJ_RS06145 IPR010920 Like-Sm (LSM) domain PAJ_RS06150 IPR010305 Protein of unknown function DUF903 PAJ_RS06150 IPR010920 Like-Sm (LSM) domain PAJ_RS06155 IPR000895 Transthyretin/hydroxyisourate hydrolase PAJ_RS06155 IPR014306 Hydroxyisourate hydrolase PAJ_RS06155 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily PAJ_RS06155 IPR023419 Transthyretin, conserved site PAJ_RS06160 IPR018660 C-type lysozyme, inhibitor PAJ_RS06165 IPR000659 Pyridoxamine 5'-phosphate oxidase PAJ_RS06165 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain PAJ_RS06165 IPR012349 FMN-binding split barrel PAJ_RS06165 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal PAJ_RS06165 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site PAJ_RS06170 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PAJ_RS06170 IPR002305 Aminoacyl-tRNA synthetase, class Ic PAJ_RS06170 IPR002307 Tyrosine-tRNA ligase PAJ_RS06170 IPR002942 RNA-binding S4 domain PAJ_RS06170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS06170 IPR024088 Tyrosine-tRNA ligase, bacterial-type PAJ_RS06170 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 PAJ_RS06175 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase PAJ_RS06175 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase PAJ_RS06175 IPR023685 Pyridoxal kinase PdxY PAJ_RS06175 IPR029056 Ribokinase-like PAJ_RS06180 IPR004045 Glutathione S-transferase, N-terminal PAJ_RS06180 IPR004046 Glutathione S-transferase, C-terminal PAJ_RS06180 IPR010987 Glutathione S-transferase, C-terminal-like PAJ_RS06180 IPR012336 Thioredoxin-like fold PAJ_RS06185 IPR000109 Proton-dependent oligopeptide transporter family PAJ_RS06185 IPR005279 Amino acid/peptide transporter family PAJ_RS06185 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site PAJ_RS06185 IPR020846 Major facilitator superfamily domain PAJ_RS06185 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A PAJ_RS06190 IPR004468 CTP synthase PAJ_RS06190 IPR017926 Glutamine amidotransferase PAJ_RS06190 IPR029062 Class I glutamine amidotransferase-like PAJ_RS06195 IPR000445 Helix-hairpin-helix motif PAJ_RS06195 IPR003265 HhH-GPD domain PAJ_RS06195 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif PAJ_RS06195 IPR004035 Endonuclease III, iron-sulphur binding site PAJ_RS06195 IPR004036 Endonuclease III-like, conserved site-2 PAJ_RS06195 IPR005759 Endonuclease III PAJ_RS06195 IPR011257 DNA glycosylase PAJ_RS06195 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PAJ_RS06200 IPR003667 Electron transport complex, Rnf/Nqr PAJ_RS06200 IPR010968 Electron transport complex, RnfE PAJ_RS06205 IPR007329 FMN-binding PAJ_RS06205 IPR010209 Electron transport complex, RnfG PAJ_RS06210 IPR004338 NADH-quinone reductase NQR2/RnfD PAJ_RS06210 IPR011303 Electron transport complex, RnfD PAJ_RS06215 IPR009051 Alpha-helical ferredoxin PAJ_RS06215 IPR010208 Electron transport complex protein RnfC PAJ_RS06215 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit PAJ_RS06215 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAJ_RS06215 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAJ_RS06215 IPR019554 Soluble ligand binding domain PAJ_RS06215 IPR026902 RnfC Barrel sandwich hybrid domain PAJ_RS06220 IPR007202 4Fe-4S domain PAJ_RS06220 IPR010207 Electron transport complex, RnfB PAJ_RS06220 IPR016463 Electron transport complex, RnfB, Proteobacteria PAJ_RS06220 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAJ_RS06225 IPR003667 Electron transport complex, Rnf/Nqr PAJ_RS06225 IPR011293 Electron transport complex, RnfA PAJ_RS06230 IPR019690 Protein of unknown function DUF2569 PAJ_RS06235 IPR007985 Haemolysin expression modulating, HHA PAJ_RS06240 IPR025997 Periplasmic binding protein domain PAJ_RS06240 IPR028082 Periplasmic binding protein-like I PAJ_RS06245 IPR003439 ABC transporter-like PAJ_RS06245 IPR003593 AAA+ ATPase domain PAJ_RS06245 IPR017871 ABC transporter, conserved site PAJ_RS06245 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS06250 IPR001851 ABC transporter, permease PAJ_RS06255 IPR001851 ABC transporter, permease PAJ_RS06260 IPR000160 GGDEF domain PAJ_RS06260 IPR029151 Periplasmic sensor domain-like PAJ_RS06260 IPR029787 Nucleotide cyclase PAJ_RS06260 IPR033479 PAJ_RS06260 PAJ_RS06270 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS06270 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS06270 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS06275 IPR010546 Protein of unknown function DUF1120 PAJ_RS06280 IPR000015 Outer membrane usher protein PAJ_RS06285 IPR008962 PapD-like PAJ_RS06285 IPR016147 PapD, N-terminal, bacterial PAJ_RS06285 IPR016148 Pili assembly chaperone, C-terminal domain PAJ_RS06290 IPR000792 Transcription regulator LuxR, C-terminal PAJ_RS06290 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS06290 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS06295 IPR000792 Transcription regulator LuxR, C-terminal PAJ_RS06295 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS06295 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS06300 IPR002477 Peptidoglycan binding-like PAJ_RS06300 IPR002502 N-acetylmuramoyl-L-alanine amidase domain PAJ_RS06305 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin PAJ_RS06305 IPR026030 Purine-cytosine permease PAJ_RS06310 IPR003313 AraC-type arabinose-binding/dimerisation domain PAJ_RS06310 IPR009057 Homeodomain-like PAJ_RS06310 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS06310 IPR032783 PAJ_RS06310 PAJ_RS06315 IPR016040 NAD(P)-binding domain PAJ_RS06320 IPR006685 Mechanosensitive ion channel MscS PAJ_RS06320 IPR010920 Like-Sm (LSM) domain PAJ_RS06320 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 PAJ_RS06330 IPR029058 Alpha/Beta hydrolase fold PAJ_RS06335 IPR001279 Beta-lactamase-like PAJ_RS06345 IPR000485 AsnC-type HTH domain PAJ_RS06345 IPR011008 Dimeric alpha-beta barrel PAJ_RS06345 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS06345 IPR019887 Transcription regulator AsnC-type, C-terminal PAJ_RS06345 IPR019888 Transcription regulator AsnC-type PAJ_RS06350 IPR005814 Aminotransferase class-III PAJ_RS06350 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS06350 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS06350 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS06355 IPR002575 Aminoglycoside phosphotransferase PAJ_RS06355 IPR011009 Protein kinase-like domain PAJ_RS06360 IPR006328 Haloacid dehalogenase, type II PAJ_RS06360 IPR006439 HAD hydrolase, subfamily IA PAJ_RS06360 IPR023214 HAD-like domain PAJ_RS06365 IPR002059 Cold-shock protein, DNA-binding PAJ_RS06365 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS06370 IPR018636 Protein of unknown function DUF2058 PAJ_RS06375 IPR010852 Protein of unknown function DUF1470 PAJ_RS06375 IPR021005 Zinc finger, CGNR PAJ_RS06375 IPR023286 ABATE domain PAJ_RS06380 IPR000073 Alpha/beta hydrolase fold-1 PAJ_RS06380 IPR000639 Epoxide hydrolase-like PAJ_RS06380 IPR029058 Alpha/Beta hydrolase fold PAJ_RS06385 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F PAJ_RS06385 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PAJ_RS06385 IPR020103 Pseudouridine synthase, catalytic domain PAJ_RS06390 IPR000847 Transcription regulator HTH, LysR PAJ_RS06390 IPR005119 LysR, substrate-binding PAJ_RS06390 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS06395 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS06395 IPR016040 NAD(P)-binding domain PAJ_RS06405 IPR003762 L-arabinose isomerase PAJ_RS06405 IPR004216 L-fucose/L-arabinose isomerase, C-terminal PAJ_RS06405 IPR009015 L-fucose isomerase, N-terminal/central domain PAJ_RS06405 IPR024664 L-arabinose isomerase, C-terminal PAJ_RS06410 IPR000577 PAJ_RS06410 PAJ_RS06410 IPR005929 L-ribulokinase PAJ_RS06410 IPR018484 Carbohydrate kinase, FGGY, N-terminal PAJ_RS06410 IPR018485 Carbohydrate kinase, FGGY, C-terminal PAJ_RS06415 IPR001761 Periplasmic binding protein/LacI sugar binding domain PAJ_RS06415 IPR026266 L-arabinose-binding periplasmic protein PAJ_RS06415 IPR028082 Periplasmic binding protein-like I PAJ_RS06420 IPR003439 ABC transporter-like PAJ_RS06420 IPR003593 AAA+ ATPase domain PAJ_RS06420 IPR017871 ABC transporter, conserved site PAJ_RS06420 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS06425 IPR001851 ABC transporter, permease PAJ_RS06430 IPR003313 AraC-type arabinose-binding/dimerisation domain PAJ_RS06430 IPR009057 Homeodomain-like PAJ_RS06430 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS06430 IPR018062 HTH domain AraC-type, conserved site PAJ_RS06430 IPR020449 Transcription regulator HTH, AraC- type PAJ_RS06435 IPR000683 Oxidoreductase, N-terminal PAJ_RS06435 IPR004104 Oxidoreductase, C-terminal PAJ_RS06435 IPR016040 NAD(P)-binding domain PAJ_RS06440 IPR001365 Adenosine/AMP deaminase domain PAJ_RS06440 IPR006330 Adenosine/adenine deaminase PAJ_RS06440 IPR028893 Adenosine deaminase PAJ_RS06440 IPR032466 PAJ_RS06440 PAJ_RS06450 IPR001250 Mannose-6-phosphate isomerase, type I PAJ_RS06450 IPR011051 RmlC-like cupin domain PAJ_RS06450 IPR014710 RmlC-like jelly roll fold PAJ_RS06450 IPR016305 Mannose-6-phosphate isomerase PAJ_RS06450 IPR018050 Phosphomannose isomerase, type I, conserved site PAJ_RS06455 IPR000362 Fumarate lyase family PAJ_RS06455 IPR005677 Fumarate hydratase, class II PAJ_RS06455 IPR008948 L-Aspartase-like PAJ_RS06455 IPR018951 Fumarase C, C-terminal PAJ_RS06455 IPR020557 Fumarate lyase, conserved site PAJ_RS06455 IPR022761 Fumarate lyase, N-terminal PAJ_RS06455 IPR024083 Fumarase/histidase, N-terminal PAJ_RS06460 IPR008865 DNA replication terminus site-binding protein PAJ_RS06465 IPR011701 Major facilitator superfamily PAJ_RS06465 IPR020846 Major facilitator superfamily domain PAJ_RS06475 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain PAJ_RS06475 IPR029058 Alpha/Beta hydrolase fold PAJ_RS06480 IPR001036 Acriflavin resistance protein PAJ_RS06480 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 PAJ_RS06480 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAJ_RS06485 IPR006143 RND efflux pump, membrane fusion protein PAJ_RS06490 IPR009057 Homeodomain-like PAJ_RS06490 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS06490 IPR018062 HTH domain AraC-type, conserved site PAJ_RS06490 IPR020449 Transcription regulator HTH, AraC- type PAJ_RS06495 IPR000026 Guanine-specific ribonuclease N1/T1 PAJ_RS06495 IPR001887 Barnase PAJ_RS06495 IPR016191 Ribonuclease/ribotoxin PAJ_RS06500 IPR000468 Barstar (barnase inhibitor) PAJ_RS06505 IPR017030 Virulence effector, SrfC PAJ_RS06510 IPR009216 Virulence factor SrfB PAJ_RS06520 IPR004711 Benzoate transporter PAJ_RS06525 IPR001387 Cro/C1-type helix-turn-helix domain PAJ_RS06525 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS06525 IPR011051 RmlC-like cupin domain PAJ_RS06525 IPR013096 Cupin 2, conserved barrel PAJ_RS06525 IPR014710 RmlC-like jelly roll fold PAJ_RS06530 IPR000868 Isochorismatase-like PAJ_RS06535 IPR000531 TonB-dependent receptor, beta-barrel PAJ_RS06535 IPR012910 TonB-dependent receptor, plug PAJ_RS06540 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding PAJ_RS06540 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS06540 IPR013328 Dehydrogenase, multihelical PAJ_RS06540 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type PAJ_RS06540 IPR016040 NAD(P)-binding domain PAJ_RS06540 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain PAJ_RS06550 IPR000891 Pyruvate carboxyltransferase PAJ_RS06550 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site PAJ_RS06550 IPR005668 2-isopropylmalate synthase PAJ_RS06550 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain PAJ_RS06550 IPR013785 Aldolase-type TIM barrel PAJ_RS06555 IPR000180 Membrane dipeptidase, active site PAJ_RS06555 IPR008257 Renal dipeptidase family PAJ_RS06555 IPR032466 PAJ_RS06555 PAJ_RS06560 IPR001279 Beta-lactamase-like PAJ_RS06560 IPR011842 Coenzyme PQQ biosynthesis protein B PAJ_RS06565 IPR004305 Thiaminase-2/PQQC PAJ_RS06565 IPR011845 Coenzyme PQQ biosynthesis protein C PAJ_RS06565 IPR016084 Haem oxygenase-like, multi-helical PAJ_RS06570 IPR008792 Coenzyme PQQ synthesis D PAJ_RS06570 IPR022479 Coenzyme PQQ synthesis D, bacteria PAJ_RS06575 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site PAJ_RS06575 IPR006638 Elongator protein 3/MiaB/NifB PAJ_RS06575 IPR007197 Radical SAM PAJ_RS06575 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria PAJ_RS06575 IPR013785 Aldolase-type TIM barrel PAJ_RS06575 IPR017200 Radical SAM coenzyme PQQ biosynthesis protein E/heme D1 biosynthesis NirJ PAJ_RS06575 IPR023885 4Fe4S-binding SPASM domain PAJ_RS06580 IPR001431 Peptidase M16, zinc-binding site PAJ_RS06580 IPR011237 Peptidase M16 domain PAJ_RS06580 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like PAJ_RS06580 IPR011765 Peptidase M16, N-terminal PAJ_RS06580 IPR011844 Coenzyme PQQ biosynthesis protein PqqF PAJ_RS06585 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PAJ_RS06590 IPR000023 Phosphofructokinase domain PAJ_RS06590 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type PAJ_RS06590 IPR022953 Phosphofructokinase PAJ_RS06595 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PAJ_RS06600 IPR004703 Phosphotransferase system, sugar-specific permease component PAJ_RS06605 IPR000771 Ketose-bisphosphate aldolase, class-II PAJ_RS06605 IPR013785 Aldolase-type TIM barrel PAJ_RS06615 IPR002178 PTS EIIA type-2 domain PAJ_RS06615 IPR016152 Phosphotransferase/anion transporter PAJ_RS06620 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS06625 IPR007263 Protein of unknown function DUF393 PAJ_RS06635 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase PAJ_RS06635 IPR011042 Six-bladed beta-propeller, TolB-like PAJ_RS06635 IPR012938 Glucose/Sorbosone dehydrogenase PAJ_RS06640 IPR001451 Bacterial transferase hexapeptide repeat PAJ_RS06640 IPR011004 Trimeric LpxA-like PAJ_RS06640 IPR017694 Phosphonate metabolim protein, transferase hexapeptide repeat family PAJ_RS06640 IPR018357 Hexapeptide transferase, conserved site PAJ_RS06645 IPR002226 Catalase haem-binding site PAJ_RS06645 IPR010582 Catalase immune-responsive domain PAJ_RS06645 IPR011614 Catalase core domain PAJ_RS06645 IPR018028 Catalase, mono-functional, haem-containing PAJ_RS06645 IPR020835 Catalase-like domain PAJ_RS06645 IPR024708 Catalase active site PAJ_RS06645 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 PAJ_RS06655 IPR013022 Xylose isomerase-like, TIM barrel domain PAJ_RS06660 IPR025997 Periplasmic binding protein domain PAJ_RS06660 IPR028082 Periplasmic binding protein-like I PAJ_RS06665 IPR003439 ABC transporter-like PAJ_RS06665 IPR003593 AAA+ ATPase domain PAJ_RS06665 IPR017871 ABC transporter, conserved site PAJ_RS06665 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS06670 IPR001851 ABC transporter, permease PAJ_RS06675 IPR000281 Helix-turn-helix protein RpiR PAJ_RS06675 IPR001347 Sugar isomerase (SIS) PAJ_RS06675 IPR009057 Homeodomain-like PAJ_RS06675 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS06680 IPR002139 Ribokinase PAJ_RS06680 IPR011611 Carbohydrate kinase PfkB PAJ_RS06680 IPR029056 Ribokinase-like PAJ_RS06685 IPR002085 Alcohol dehydrogenase superfamily, zinc-type PAJ_RS06685 IPR011032 GroES (chaperonin 10)-like PAJ_RS06685 IPR013149 Alcohol dehydrogenase, C-terminal PAJ_RS06685 IPR016040 NAD(P)-binding domain PAJ_RS06685 IPR020843 Polyketide synthase, enoylreductase PAJ_RS06690 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAJ_RS06695 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS06695 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS06695 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PAJ_RS06695 IPR024478 4HB MCP domain PAJ_RS06700 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS06700 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS06700 IPR011006 CheY-like superfamily PAJ_RS06700 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS06700 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS06705 IPR005226 UPF0014 family PAJ_RS06710 IPR003439 ABC transporter-like PAJ_RS06710 IPR003593 AAA+ ATPase domain PAJ_RS06710 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS06715 IPR001451 Bacterial transferase hexapeptide repeat PAJ_RS06715 IPR011004 Trimeric LpxA-like PAJ_RS06715 IPR018357 Hexapeptide transferase, conserved site PAJ_RS06715 IPR024688 Maltose/galactoside acetyltransferase PAJ_RS06725 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAJ_RS06725 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAJ_RS06730 IPR000847 Transcription regulator HTH, LysR PAJ_RS06730 IPR005119 LysR, substrate-binding PAJ_RS06730 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS06735 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS06735 IPR016040 NAD(P)-binding domain PAJ_RS06735 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS06740 IPR000847 Transcription regulator HTH, LysR PAJ_RS06740 IPR005119 LysR, substrate-binding PAJ_RS06740 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS06745 IPR011642 Nucleoside recognition Gate PAJ_RS06750 IPR011642 Nucleoside recognition Gate PAJ_RS06755 IPR002933 Peptidase M20 PAJ_RS06755 IPR011650 Peptidase M20, dimerisation domain PAJ_RS06755 IPR017439 Amidohydrolase PAJ_RS06760 IPR006659 Arsenate reductase PAJ_RS06760 IPR006660 Arsenate reductase-like PAJ_RS06760 IPR012336 Thioredoxin-like fold PAJ_RS06765 IPR000802 Arsenical pump membrane protein, ArsB PAJ_RS06770 IPR001845 HTH ArsR-type DNA-binding domain PAJ_RS06770 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS06780 IPR022270 Beta-carotene 15,15'-monooxygenase, Brp/Blh family PAJ_RS06785 IPR001425 Archaeal/bacterial/fungal rhodopsin PAJ_RS06785 IPR018229 Rhodopsin, retinal binding site PAJ_RS06790 IPR016192 APOBEC/CMP deaminase, zinc-binding PAJ_RS06790 IPR016193 Cytidine deaminase-like PAJ_RS06795 IPR000182 GNAT domain PAJ_RS06795 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS06800 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAJ_RS06810 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal PAJ_RS06810 IPR013785 Aldolase-type TIM barrel PAJ_RS06815 IPR010854 Domain of unknown function DUF1471 PAJ_RS06815 IPR025543 Dodecin-like PAJ_RS06820 IPR001952 Alkaline phosphatase PAJ_RS06820 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha PAJ_RS06820 IPR017850 Alkaline-phosphatase-like, core domain PAJ_RS06830 IPR007627 RNA polymerase sigma-70 region 2 PAJ_RS06830 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS06830 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PAJ_RS06830 IPR013324 RNA polymerase sigma factor, region 3/4 PAJ_RS06830 IPR013325 RNA polymerase sigma factor, region 2 PAJ_RS06830 IPR014284 RNA polymerase sigma-70 like domain PAJ_RS06835 IPR000515 MetI-like domain PAJ_RS06840 IPR000515 MetI-like domain PAJ_RS06840 IPR029345 Maltose transport system permease protein MalF, P2 domain PAJ_RS06845 IPR006060 Maltose binding protein PAJ_RS06850 IPR003439 ABC transporter-like PAJ_RS06850 IPR003593 AAA+ ATPase domain PAJ_RS06850 IPR008995 Molybdate/tungstate binding, C-terminal PAJ_RS06850 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS06850 IPR013611 Transport-associated OB, type 2 PAJ_RS06850 IPR017871 ABC transporter, conserved site PAJ_RS06850 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS06855 IPR003192 Porin, LamB type PAJ_RS06855 IPR023738 Maltoporin PAJ_RS06860 IPR010794 Maltose operon periplasmic PAJ_RS06865 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL PAJ_RS06865 IPR022742 Putative lysophospholipase PAJ_RS06865 IPR029058 Alpha/Beta hydrolase fold PAJ_RS06870 IPR009057 Homeodomain-like PAJ_RS06870 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS06875 IPR003385 Glycoside hydrolase, family 77 PAJ_RS06875 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS06875 IPR017853 Glycoside hydrolase, superfamily PAJ_RS06880 IPR000811 Glycosyl transferase, family 35 PAJ_RS06880 IPR011833 Glycogen/starch/alpha-glucan phosphorylase PAJ_RS06885 IPR000792 Transcription regulator LuxR, C-terminal PAJ_RS06885 IPR011990 Tetratricopeptide-like helical domain PAJ_RS06885 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS06885 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS06885 IPR023768 Transcriptional regulator HTH-type, MalT PAJ_RS06885 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS06890 IPR011701 Major facilitator superfamily PAJ_RS06890 IPR020846 Major facilitator superfamily domain PAJ_RS06895 IPR000182 GNAT domain PAJ_RS06895 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS06900 IPR003790 Protein of unknown function DUF187 PAJ_RS06900 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS06900 IPR017853 Glycoside hydrolase, superfamily PAJ_RS06905 IPR006656 Molybdopterin oxidoreductase PAJ_RS06905 IPR006657 Molydopterin dinucleotide-binding domain PAJ_RS06905 IPR009010 Aspartate decarboxylase-like domain PAJ_RS06905 IPR010046 Oxidoreductase alpha (molybdopterin) subunit PAJ_RS06910 IPR003416 MgtC/SapB/SrpB transporter PAJ_RS06925 IPR002514 Transposase IS3/IS911family PAJ_RS06925 IPR009057 Homeodomain-like PAJ_RS06930 IPR001584 Integrase, catalytic core PAJ_RS06930 IPR012337 Ribonuclease H-like domain PAJ_RS06930 IPR025948 HTH-like domain PAJ_RS06965 IPR012332 P22 tailspike C-terminal domain-like PAJ_RS06965 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS06965 IPR017853 Glycoside hydrolase, superfamily PAJ_RS06970 IPR003439 ABC transporter-like PAJ_RS06970 IPR003593 AAA+ ATPase domain PAJ_RS06970 IPR005074 Peptidase C39, bacteriocin processing PAJ_RS06970 IPR010132 ATPase, type I secretion system, HlyB PAJ_RS06970 IPR011527 ABC transporter type 1, transmembrane domain PAJ_RS06970 IPR017871 ABC transporter, conserved site PAJ_RS06970 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS06975 IPR003997 RTX secretion protein D, Gram-negative bacteria PAJ_RS06975 IPR006144 Secretion protein HlyD, conserved site PAJ_RS06975 IPR010129 Type I secretion membrane fusion protein, HlyD PAJ_RS06980 IPR003423 Outer membrane efflux protein PAJ_RS06980 IPR028351 Cyclolysin transport protein CyaE PAJ_RS06985 IPR000064 Endopeptidase, NLPC/P60 domain PAJ_RS06990 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAJ_RS06990 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAJ_RS06995 IPR000086 NUDIX hydrolase domain PAJ_RS06995 IPR015797 NUDIX hydrolase domain-like PAJ_RS06995 IPR020084 NUDIX hydrolase, conserved site PAJ_RS06995 IPR020476 NUDIX hydrolase PAJ_RS07005 IPR003495 CobW/HypB/UreG domain PAJ_RS07005 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PAJ_RS07005 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS07015 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS07015 IPR016040 NAD(P)-binding domain PAJ_RS07015 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS07020 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS07020 IPR016040 NAD(P)-binding domain PAJ_RS07020 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS07025 IPR005829 Sugar transporter, conserved site PAJ_RS07025 IPR011701 Major facilitator superfamily PAJ_RS07025 IPR020846 Major facilitator superfamily domain PAJ_RS07030 IPR002509 Polysaccharide deacetylase PAJ_RS07030 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel PAJ_RS07035 IPR000120 Amidase PAJ_RS07035 IPR023631 Amidase signature domain PAJ_RS07040 IPR000524 Transcription regulator HTH, GntR PAJ_RS07040 IPR008920 Transcription regulator FadR/GntR, C-terminal PAJ_RS07040 IPR011711 GntR, C-terminal PAJ_RS07040 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS07045 IPR001915 Peptidase M48 PAJ_RS07050 IPR006175 YjgF/Yer057p/UK114 family PAJ_RS07050 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAJ_RS07055 IPR006076 FAD dependent oxidoreductase PAJ_RS07055 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS07060 IPR015590 Aldehyde dehydrogenase domain PAJ_RS07060 IPR016161 Aldehyde/histidinol dehydrogenase PAJ_RS07060 IPR016162 Aldehyde dehydrogenase, N-terminal PAJ_RS07060 IPR016163 Aldehyde dehydrogenase, C-terminal PAJ_RS07060 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PAJ_RS07065 IPR001608 Alanine racemase, N-terminal PAJ_RS07065 IPR026956 D-serine dehydratase-like domain PAJ_RS07065 IPR029066 PLP-binding barrel PAJ_RS07070 IPR000847 Transcription regulator HTH, LysR PAJ_RS07070 IPR005119 LysR, substrate-binding PAJ_RS07070 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS07075 IPR011051 RmlC-like cupin domain PAJ_RS07075 IPR013096 Cupin 2, conserved barrel PAJ_RS07075 IPR014710 RmlC-like jelly roll fold PAJ_RS07080 IPR000782 FAS1 domain PAJ_RS07085 IPR007627 RNA polymerase sigma-70 region 2 PAJ_RS07085 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS07085 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PAJ_RS07085 IPR013324 RNA polymerase sigma factor, region 3/4 PAJ_RS07085 IPR013325 RNA polymerase sigma factor, region 2 PAJ_RS07085 IPR014284 RNA polymerase sigma-70 like domain PAJ_RS07090 IPR018764 Anti-sigma K factor RskA PAJ_RS07095 IPR003660 HAMP linker domain PAJ_RS07095 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS07095 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS07095 IPR024478 4HB MCP domain PAJ_RS07100 IPR003855 K+ potassium transporter PAJ_RS07100 IPR023051 Potassium uptake protein, low affinity, Kup PAJ_RS07105 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V PAJ_RS07105 IPR011057 Mss4-like PAJ_RS07110 IPR012893 HipA-like, C-terminal PAJ_RS07110 IPR017508 HipA, N-terminal subdomain 1 PAJ_RS07115 IPR001387 Cro/C1-type helix-turn-helix domain PAJ_RS07115 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS07120 IPR000182 GNAT domain PAJ_RS07120 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS07130 IPR001927 Sodium:galactoside symporter PAJ_RS07130 IPR020846 Major facilitator superfamily domain PAJ_RS07135 IPR001690 Autoinducer synthesis protein PAJ_RS07135 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS07135 IPR018311 Autoinducer synthesis, conserved site PAJ_RS07140 IPR000792 Transcription regulator LuxR, C-terminal PAJ_RS07140 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain PAJ_RS07140 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS07140 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS07145 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS07145 IPR016040 NAD(P)-binding domain PAJ_RS07150 IPR001466 Beta-lactamase-related PAJ_RS07150 IPR001586 Beta-lactamase, class-C active site PAJ_RS07150 IPR012338 Beta-lactamase/transpeptidase-like PAJ_RS07160 IPR001296 Glycosyl transferase, family 1 PAJ_RS07165 IPR002938 Monooxygenase, FAD-binding PAJ_RS07165 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS07170 IPR001567 Peptidase M3A/M3B PAJ_RS07170 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PAJ_RS07170 IPR024079 Metallopeptidase, catalytic domain PAJ_RS07170 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal PAJ_RS07175 IPR003777 XdhC- CoxI PAJ_RS07175 IPR014308 Xanthine dehydrogenase accessory protein XdhC PAJ_RS07175 IPR016040 NAD(P)-binding domain PAJ_RS07175 IPR027051 XdhC Rossmann domain PAJ_RS07180 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead PAJ_RS07180 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding PAJ_RS07180 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit PAJ_RS07185 IPR001041 2Fe-2S ferredoxin-type domain PAJ_RS07185 IPR002346 Molybdopterin dehydrogenase, FAD-binding PAJ_RS07185 IPR002888 [2Fe-2S]-binding PAJ_RS07185 IPR005107 CO dehydrogenase flavoprotein, C-terminal PAJ_RS07185 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PAJ_RS07185 IPR012175 Xanthine dehydrogenase, small subunit, bacteria PAJ_RS07185 IPR012675 Beta-grasp domain PAJ_RS07185 IPR014307 Xanthine dehydrogenase, small subunit PAJ_RS07185 IPR016166 FAD-binding, type 2 PAJ_RS07185 IPR016167 FAD-binding, type 2, subdomain 1 PAJ_RS07185 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 PAJ_RS07190 IPR006680 Amidohydrolase 1 PAJ_RS07190 IPR011059 Metal-dependent hydrolase, composite domain PAJ_RS07190 IPR014311 Guanine deaminase PAJ_RS07190 IPR032466 PAJ_RS07190 PAJ_RS07195 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS07195 IPR016040 NAD(P)-binding domain PAJ_RS07195 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS07200 IPR003844 Uncharacterised protein family UPF0060 PAJ_RS07205 IPR009700 Protein of unknown function DUF1283 PAJ_RS07210 IPR010595 Protein of unknown function DUF1161 PAJ_RS07215 IPR011701 Major facilitator superfamily PAJ_RS07215 IPR020846 Major facilitator superfamily domain PAJ_RS07220 IPR000515 MetI-like domain PAJ_RS07230 IPR000515 MetI-like domain PAJ_RS07235 IPR000644 CBS domain PAJ_RS07235 IPR003439 ABC transporter-like PAJ_RS07235 IPR003593 AAA+ ATPase domain PAJ_RS07235 IPR005892 Glycine betaine transport ATP-binding subunit PAJ_RS07235 IPR017871 ABC transporter, conserved site PAJ_RS07235 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS07240 IPR004472 Dethiobiotin synthase BioD PAJ_RS07240 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS07245 IPR000600 ROK PAJ_RS07245 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS07250 IPR000847 Transcription regulator HTH, LysR PAJ_RS07250 IPR005119 LysR, substrate-binding PAJ_RS07250 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS07255 IPR005829 Sugar transporter, conserved site PAJ_RS07255 IPR011701 Major facilitator superfamily PAJ_RS07255 IPR020846 Major facilitator superfamily domain PAJ_RS07265 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase PAJ_RS07265 IPR016174 Di-haem cytochrome, transmembrane PAJ_RS07270 IPR011701 Major facilitator superfamily PAJ_RS07270 IPR020846 Major facilitator superfamily domain PAJ_RS07280 IPR000962 Zinc finger, DksA/TraR C4-type PAJ_RS07285 IPR000914 Bacterial extracellular solute-binding protein, family 5 PAJ_RS07285 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site PAJ_RS07285 IPR030678 PAJ_RS07285 PAJ_RS07290 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site PAJ_RS07290 IPR002933 Peptidase M20 PAJ_RS07290 IPR010161 Peptidase M20B, tripeptide aminopeptidase PAJ_RS07290 IPR011650 Peptidase M20, dimerisation domain PAJ_RS07295 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding PAJ_RS07295 IPR003660 HAMP linker domain PAJ_RS07295 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS07295 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS07295 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PAJ_RS07300 IPR002018 Carboxylesterase, type B PAJ_RS07300 IPR019819 Carboxylesterase type B, conserved site PAJ_RS07300 IPR019826 Carboxylesterase type B, active site PAJ_RS07300 IPR029058 Alpha/Beta hydrolase fold PAJ_RS07305 IPR032808 PAJ_RS07305 PAJ_RS07310 IPR009770 Domain of unknown function DUF1338 PAJ_RS07315 IPR005829 Sugar transporter, conserved site PAJ_RS07315 IPR011701 Major facilitator superfamily PAJ_RS07315 IPR020846 Major facilitator superfamily domain PAJ_RS07320 IPR000847 Transcription regulator HTH, LysR PAJ_RS07320 IPR005119 LysR, substrate-binding PAJ_RS07320 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS07325 IPR002625 Smr protein/MutS2 C-terminal PAJ_RS07330 IPR000595 Cyclic nucleotide-binding domain PAJ_RS07330 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS07330 IPR012318 Helix-turn-helix motif, Crp-type PAJ_RS07330 IPR014710 RmlC-like jelly roll fold PAJ_RS07330 IPR018335 Transcription regulator HTH, Crp-type, conserved site PAJ_RS07330 IPR018490 Cyclic nucleotide-binding-like PAJ_RS07335 IPR006016 UspA PAJ_RS07335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS07340 IPR012136 NADP transhydrogenase, beta subunit PAJ_RS07340 IPR029035 DHS-like NAD/FAD-binding domain PAJ_RS07345 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PAJ_RS07345 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PAJ_RS07345 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 PAJ_RS07345 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 PAJ_RS07345 IPR016040 NAD(P)-binding domain PAJ_RS07345 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS07345 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal PAJ_RS07345 IPR026255 NAD(P) transhydrogenase, alpha subunit PAJ_RS07350 IPR010854 Domain of unknown function DUF1471 PAJ_RS07350 IPR025543 Dodecin-like PAJ_RS07355 IPR002293 Amino acid/polyamine transporter I PAJ_RS07355 IPR004754 Amino acid antiporter PAJ_RS07365 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS07365 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS07365 IPR011006 CheY-like superfamily PAJ_RS07365 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS07370 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS07370 IPR003660 HAMP linker domain PAJ_RS07370 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS07370 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS07375 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase PAJ_RS07380 IPR023497 Acid shock protein PAJ_RS07385 IPR001254 Peptidase S1 PAJ_RS07385 IPR008256 Peptidase S1B PAJ_RS07385 IPR009003 Trypsin-like cysteine/serine peptidase domain PAJ_RS07385 IPR018114 Peptidase S1, trypsin family, active site PAJ_RS07385 IPR033116 PAJ_RS07385 PAJ_RS07390 IPR001650 Helicase, C-terminal PAJ_RS07390 IPR003593 AAA+ ATPase domain PAJ_RS07390 IPR007502 Helicase-associated domain PAJ_RS07390 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type PAJ_RS07390 IPR011545 DEAD/DEAH box helicase domain PAJ_RS07390 IPR011709 Domain of unknown function DUF1605 PAJ_RS07390 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS07390 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal PAJ_RS07390 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS07395 IPR003680 Flavodoxin-like fold PAJ_RS07395 IPR023048 NADH-azoreductase, FMN-dependent PAJ_RS07395 IPR029039 Flavoprotein-like PAJ_RS07400 IPR008309 Uncharacterised conserved protein UCP025560 PAJ_RS07405 IPR025985 YnbE-like lipoprotein PAJ_RS07410 IPR021730 Dicarboxylate transport PAJ_RS07415 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PAJ_RS07415 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PAJ_RS07415 IPR016040 NAD(P)-binding domain PAJ_RS07415 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PAJ_RS07415 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PAJ_RS07420 IPR005590 Protein of unknown function DUF333 PAJ_RS07425 IPR003416 MgtC/SapB/SrpB transporter PAJ_RS07430 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase PAJ_RS07430 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA PAJ_RS07430 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS07435 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB PAJ_RS07440 IPR000914 Bacterial extracellular solute-binding protein, family 5 PAJ_RS07440 IPR030678 PAJ_RS07440 PAJ_RS07445 IPR000834 Peptidase M14, carboxypeptidase A PAJ_RS07450 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase PAJ_RS07450 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PAJ_RS07450 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PAJ_RS07450 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site PAJ_RS07450 IPR029017 Enolase N-terminal domain-like PAJ_RS07450 IPR029065 Enolase C-terminal domain-like PAJ_RS07455 IPR002065 Putative thiol peroxidase Tpx PAJ_RS07455 IPR012336 Thioredoxin-like fold PAJ_RS07455 IPR013740 Redoxin PAJ_RS07455 IPR018219 Thiol peroxidase conserved site PAJ_RS07460 IPR000014 PAS domain PAJ_RS07460 IPR002078 RNA polymerase sigma factor 54 interaction domain PAJ_RS07460 IPR003593 AAA+ ATPase domain PAJ_RS07460 IPR009057 Homeodomain-like PAJ_RS07460 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAJ_RS07460 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAJ_RS07460 IPR025944 Sigma-54 interaction domain, conserved site PAJ_RS07460 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS07460 IPR030828 PAJ_RS07460 PAJ_RS07465 IPR006507 Uncharacterised protein family UPF0283 PAJ_RS07465 IPR021147 Protein of unknown function DUF697 PAJ_RS07470 IPR007413 Protein of unknown function DUF463, YcjX-like protein PAJ_RS07475 IPR014321 Phage shock protein, PspD PAJ_RS07480 IPR007168 Phage shock protein, PspC, N-terminal PAJ_RS07480 IPR014320 Phage shock protein, PspC PAJ_RS07485 IPR009554 Phage shock protein, PspB PAJ_RS07490 IPR007157 PspA/IM30 PAJ_RS07490 IPR014319 Phage shock protein, PspA PAJ_RS07495 IPR002078 RNA polymerase sigma factor 54 interaction domain PAJ_RS07495 IPR002197 DNA binding HTH domain, Fis-type PAJ_RS07495 IPR003593 AAA+ ATPase domain PAJ_RS07495 IPR009057 Homeodomain-like PAJ_RS07495 IPR014317 Transcription activator PspF PAJ_RS07495 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAJ_RS07495 IPR025944 Sigma-54 interaction domain, conserved site PAJ_RS07495 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS07500 IPR000182 GNAT domain PAJ_RS07500 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS07505 IPR000914 Bacterial extracellular solute-binding protein, family 5 PAJ_RS07505 IPR030678 PAJ_RS07505 PAJ_RS07510 IPR000515 MetI-like domain PAJ_RS07515 IPR000515 MetI-like domain PAJ_RS07515 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PAJ_RS07520 IPR003439 ABC transporter-like PAJ_RS07520 IPR003593 AAA+ ATPase domain PAJ_RS07520 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PAJ_RS07520 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS07525 IPR003439 ABC transporter-like PAJ_RS07525 IPR003593 AAA+ ATPase domain PAJ_RS07525 IPR017871 ABC transporter, conserved site PAJ_RS07525 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS07530 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS07530 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) PAJ_RS07530 IPR016040 NAD(P)-binding domain PAJ_RS07535 IPR029032 AhpD-like PAJ_RS07540 IPR000847 Transcription regulator HTH, LysR PAJ_RS07540 IPR005119 LysR, substrate-binding PAJ_RS07540 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS07545 IPR001996 Phosphotransferase system, IIB component, type 1 PAJ_RS07545 IPR003352 Phosphotransferase system, EIIC PAJ_RS07545 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site PAJ_RS07550 IPR006656 Molybdopterin oxidoreductase PAJ_RS07550 IPR006657 Molydopterin dinucleotide-binding domain PAJ_RS07550 IPR009010 Aspartate decarboxylase-like domain PAJ_RS07550 IPR010046 Oxidoreductase alpha (molybdopterin) subunit PAJ_RS07555 IPR003029 Ribosomal protein S1, RNA-binding domain PAJ_RS07555 IPR004476 Ribonuclease II/ribonuclease R PAJ_RS07555 IPR011129 Cold shock protein PAJ_RS07555 IPR011804 Ribonuclease II PAJ_RS07555 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS07555 IPR013223 Ribonuclease B, N-terminal OB domain PAJ_RS07555 IPR022966 Ribonuclease II/R, conserved site PAJ_RS07560 IPR003706 Carbon starvation protein CstA PAJ_RS07560 IPR025299 CstA C-terminal domain PAJ_RS07565 IPR007423 Protein of unknown function DUF466 PAJ_RS07570 IPR000014 PAS domain PAJ_RS07570 IPR000160 GGDEF domain PAJ_RS07570 IPR001633 EAL domain PAJ_RS07570 IPR029787 Nucleotide cyclase PAJ_RS07575 IPR001753 Crotonase superfamily PAJ_RS07575 IPR029045 ClpP/crotonase-like domain PAJ_RS07580 IPR001303 Class II aldolase/adducin N-terminal PAJ_RS07580 IPR004661 L-ribulose-5-phosphate 4-epimerase PAJ_RS07590 IPR008816 Glycine zipper 2TM domain PAJ_RS07595 IPR001950 Translation initiation factor SUI1 PAJ_RS07595 IPR005872 Archaeal/bacterial translation initiation factor SUI1 PAJ_RS07600 IPR001754 Orotidine 5'-phosphate decarboxylase domain PAJ_RS07600 IPR011060 Ribulose-phosphate binding barrel PAJ_RS07600 IPR013785 Aldolase-type TIM barrel PAJ_RS07600 IPR014732 Orotidine 5'-phosphate decarboxylase PAJ_RS07600 IPR018089 Orotidine 5'-phosphate decarboxylase, active site PAJ_RS07605 IPR011990 Tetratricopeptide-like helical domain PAJ_RS07605 IPR019734 Tetratricopeptide repeat PAJ_RS07605 IPR030865 PAJ_RS07605 PAJ_RS07610 IPR010445 Protein of unknown function DUF1049 PAJ_RS07610 IPR032906 PAJ_RS07610 PAJ_RS07615 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAJ_RS07620 IPR000926 GTP cyclohydrolase II, RibA PAJ_RS07620 IPR032677 PAJ_RS07620 PAJ_RS07625 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel PAJ_RS07625 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha PAJ_RS07625 IPR006249 Aconitate/iron regulatory protein 2 PAJ_RS07625 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PAJ_RS07625 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 PAJ_RS07625 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 PAJ_RS07625 IPR015937 Aconitase/isopropylmalate dehydratase PAJ_RS07625 IPR018136 Aconitase family, 4Fe-4S cluster binding site PAJ_RS07635 IPR000847 Transcription regulator HTH, LysR PAJ_RS07635 IPR005119 LysR, substrate-binding PAJ_RS07635 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS07640 IPR000380 DNA topoisomerase, type IA PAJ_RS07640 IPR003601 DNA topoisomerase, type IA, domain 2 PAJ_RS07640 IPR003602 DNA topoisomerase, type IA, DNA-binding domain PAJ_RS07640 IPR005733 DNA topoisomerase I, bacterial-type PAJ_RS07640 IPR006171 Toprim domain PAJ_RS07640 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type PAJ_RS07640 IPR013497 DNA topoisomerase, type IA, central PAJ_RS07640 IPR013498 DNA topoisomerase, type IA, zn finger PAJ_RS07640 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PAJ_RS07640 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PAJ_RS07640 IPR023405 DNA topoisomerase, type IA, core domain PAJ_RS07640 IPR023406 DNA topoisomerase, type IA, active site PAJ_RS07640 IPR028612 DNA topoisomerase I, type IA PAJ_RS07645 IPR019633 Protein of unknown function DUF2498 PAJ_RS07650 IPR002142 Peptidase S49 PAJ_RS07650 IPR013703 Peptidase S49, N-terminal proteobacteria PAJ_RS07650 IPR029045 ClpP/crotonase-like domain PAJ_RS07655 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS07655 IPR016040 NAD(P)-binding domain PAJ_RS07655 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS07660 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR PAJ_RS07660 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain PAJ_RS07660 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS07665 IPR004680 Citrate transporter-like domain PAJ_RS07665 IPR014738 Citrate transporter PAJ_RS07670 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PAJ_RS07670 IPR002942 RNA-binding S4 domain PAJ_RS07670 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F PAJ_RS07670 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PAJ_RS07670 IPR020103 Pseudouridine synthase, catalytic domain PAJ_RS07680 IPR009003 Trypsin-like cysteine/serine peptidase domain PAJ_RS07685 IPR006070 YrdC-like domain PAJ_RS07685 IPR017945 DHBP synthase RibB-like alpha/beta domain PAJ_RS07690 IPR003141 Polymerase/histidinol phosphatase, N-terminal PAJ_RS07690 IPR004013 PHP, C-terminal PAJ_RS07690 IPR016195 Polymerase/histidinol phosphatase-like PAJ_RS07695 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial PAJ_RS07695 IPR005801 ADC synthase PAJ_RS07695 IPR006805 Anthranilate synthase component I, N-terminal PAJ_RS07695 IPR015890 Chorismate binding, C-terminal PAJ_RS07695 IPR019999 Anthranilate synthase component I - like PAJ_RS07700 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain PAJ_RS07700 IPR017926 Glutamine amidotransferase PAJ_RS07700 IPR029062 Class I glutamine amidotransferase-like PAJ_RS07705 IPR000312 Glycosyl transferase, family 3 PAJ_RS07705 IPR005940 Anthranilate phosphoribosyl transferase PAJ_RS07705 IPR017459 Glycosyl transferase family 3, N-terminal domain PAJ_RS07710 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain PAJ_RS07710 IPR001468 Indole-3-glycerol phosphate synthase, conserved site PAJ_RS07710 IPR011060 Ribulose-phosphate binding barrel PAJ_RS07710 IPR013785 Aldolase-type TIM barrel PAJ_RS07710 IPR013798 Indole-3-glycerol phosphate synthase PAJ_RS07715 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAJ_RS07715 IPR006653 Tryptophan synthase, beta chain, conserved site PAJ_RS07715 IPR006654 Tryptophan synthase, beta chain PAJ_RS07715 IPR023026 Tryptophan synthase beta chain/beta chain-like PAJ_RS07720 IPR002028 Tryptophan synthase, alpha chain PAJ_RS07720 IPR011060 Ribulose-phosphate binding barrel PAJ_RS07720 IPR013785 Aldolase-type TIM barrel PAJ_RS07720 IPR018204 Tryptophan synthase, alpha chain, active site PAJ_RS07725 IPR007055 BON domain PAJ_RS07725 IPR014004 Transport-associated and nodulation domain, bacteria PAJ_RS07730 IPR000758 Virulence-related outer membrane protein PAJ_RS07730 IPR005618 Outer membrane protein, OmpW PAJ_RS07730 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel PAJ_RS07735 IPR005358 Putative zinc- or iron-chelating domain containing protein PAJ_RS07740 IPR009627 Uncharacterised protein family UPF0259 PAJ_RS07745 IPR006008 Intracellular septation protein A PAJ_RS07750 IPR006683 Thioesterase superfamily PAJ_RS07750 IPR029069 HotDog domain PAJ_RS07755 IPR003538 Gram-negative bacterial TonB protein PAJ_RS07755 IPR006260 TonB, C-terminal PAJ_RS07760 IPR005545 YCII-related PAJ_RS07760 IPR011008 Dimeric alpha-beta barrel PAJ_RS07770 IPR001736 Phospholipase D/Transphosphatidylase PAJ_RS07770 IPR022924 Cardiolipin synthase PAJ_RS07770 IPR025202 Phospholipase D-like domain PAJ_RS07770 IPR027379 Cardiolipin synthase N-terminal PAJ_RS07770 IPR030840 PAJ_RS07770 PAJ_RS07775 IPR007376 dsDNA mimic, putative PAJ_RS07780 IPR003439 ABC transporter-like PAJ_RS07780 IPR003593 AAA+ ATPase domain PAJ_RS07780 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PAJ_RS07780 IPR017871 ABC transporter, conserved site PAJ_RS07780 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS07785 IPR003439 ABC transporter-like PAJ_RS07785 IPR003593 AAA+ ATPase domain PAJ_RS07785 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PAJ_RS07785 IPR017871 ABC transporter, conserved site PAJ_RS07785 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS07790 IPR000515 MetI-like domain PAJ_RS07790 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PAJ_RS07795 IPR000515 MetI-like domain PAJ_RS07800 IPR000914 Bacterial extracellular solute-binding protein, family 5 PAJ_RS07800 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site PAJ_RS07800 IPR030678 PAJ_RS07800 PAJ_RS07805 IPR000914 Bacterial extracellular solute-binding protein, family 5 PAJ_RS07805 IPR030678 PAJ_RS07805 PAJ_RS07810 IPR002771 Multiple antibiotic resistance (MarC)-related PAJ_RS07815 IPR001670 Alcohol dehydrogenase, iron-type PAJ_RS07815 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase PAJ_RS07815 IPR015590 Aldehyde dehydrogenase domain PAJ_RS07815 IPR016161 Aldehyde/histidinol dehydrogenase PAJ_RS07815 IPR016162 Aldehyde dehydrogenase, N-terminal PAJ_RS07815 IPR016163 Aldehyde dehydrogenase, C-terminal PAJ_RS07815 IPR018211 Alcohol dehydrogenase, iron-type, conserved site PAJ_RS07820 IPR001267 Thymidine kinase PAJ_RS07820 IPR020633 Thymidine kinase, conserved site PAJ_RS07820 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS07825 IPR001801 Histone-like protein H-NS PAJ_RS07825 IPR027444 Histone-like protein H-NS, C-terminal domain PAJ_RS07825 IPR027454 Histone-like protein H-NS family, oligomerisation domain PAJ_RS07830 IPR008089 Nucleotide sugar epimerase PAJ_RS07830 IPR016040 NAD(P)-binding domain PAJ_RS07835 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal PAJ_RS07835 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS07835 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation PAJ_RS07835 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal PAJ_RS07835 IPR016040 NAD(P)-binding domain PAJ_RS07835 IPR017476 UDP-glucose/GDP-mannose dehydrogenase PAJ_RS07835 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type PAJ_RS07840 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type PAJ_RS07840 IPR005835 Nucleotidyl transferase PAJ_RS07840 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS07845 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS07845 IPR011006 CheY-like superfamily PAJ_RS07845 IPR028616 Regulator of RpoS PAJ_RS07850 IPR002641 Patatin/Phospholipase A2-related PAJ_RS07850 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PAJ_RS07855 IPR004027 SEC-C motif PAJ_RS07855 IPR023006 Uncharacterised protein family UPF0225 PAJ_RS07855 IPR032710 PAJ_RS07855 PAJ_RS07860 IPR002376 Formyl transferase, N-terminal PAJ_RS07860 IPR002912 ACT domain PAJ_RS07860 IPR004810 Formyltetrahydrofolate deformylase PAJ_RS07890 IPR004808 AP endonuclease 1 PAJ_RS07890 IPR005135 Endonuclease/exonuclease/phosphatase PAJ_RS07890 IPR020847 AP endonuclease 1, binding site PAJ_RS07890 IPR020848 AP endonuclease 1, conserved site PAJ_RS07895 IPR009971 Protein of unknown function DUF1496 PAJ_RS07900 IPR000380 DNA topoisomerase, type IA PAJ_RS07900 IPR003601 DNA topoisomerase, type IA, domain 2 PAJ_RS07900 IPR003602 DNA topoisomerase, type IA, DNA-binding domain PAJ_RS07900 IPR005738 DNA topoisomerase III PAJ_RS07900 IPR006171 Toprim domain PAJ_RS07900 IPR013497 DNA topoisomerase, type IA, central PAJ_RS07900 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PAJ_RS07900 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PAJ_RS07900 IPR023405 DNA topoisomerase, type IA, core domain PAJ_RS07900 IPR023406 DNA topoisomerase, type IA, active site PAJ_RS07905 IPR000415 Nitroreductase-like PAJ_RS07905 IPR026021 Putative NAD(P)H nitroreductase YdjA-like PAJ_RS07905 IPR029479 Nitroreductase PAJ_RS07910 IPR002142 Peptidase S49 PAJ_RS07910 IPR004634 Peptidase S49, protease IV PAJ_RS07910 IPR004635 Peptidase S49, SppA PAJ_RS07910 IPR029045 ClpP/crotonase-like domain PAJ_RS07915 IPR006033 L-asparaginase, type I PAJ_RS07915 IPR006034 Asparaginase/glutaminase PAJ_RS07915 IPR020827 Asparaginase/glutaminase, active site 1 PAJ_RS07915 IPR027473 L-asparaginase, C-terminal domain PAJ_RS07915 IPR027474 L-asparaginase, N-terminal PAJ_RS07915 IPR027475 Asparaginase/glutaminase, active site 2 PAJ_RS07920 IPR000868 Isochorismatase-like PAJ_RS07925 IPR009749 Protein of unknown function DUF1315 PAJ_RS07930 IPR002579 Peptide methionine sulphoxide reductase MrsB PAJ_RS07930 IPR011057 Mss4-like PAJ_RS07930 IPR028427 Peptide methionine sulfoxide reductase PAJ_RS07935 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I PAJ_RS07935 IPR016040 NAD(P)-binding domain PAJ_RS07935 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain PAJ_RS07935 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain PAJ_RS07935 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site PAJ_RS07935 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family PAJ_RS07940 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase PAJ_RS07940 IPR011013 Galactose mutarotase-like domain PAJ_RS07940 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup PAJ_RS07940 IPR025532 Glucose-6-phosphate 1-epimerase PAJ_RS07945 IPR001395 Aldo/keto reductase PAJ_RS07945 IPR020471 Aldo/keto reductase subgroup PAJ_RS07945 IPR023210 NADP-dependent oxidoreductase domain PAJ_RS07950 IPR010583 MltA-interacting MipA PAJ_RS07950 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel PAJ_RS07955 IPR010650 PrkA C-terminal domain PAJ_RS07955 IPR013153 PrkA AAA domain PAJ_RS07955 IPR016230 Serine-protein kinase, PrkA PAJ_RS07955 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS07960 IPR006698 Thermus phage phiYS40, Orf56 PAJ_RS07965 IPR005170 Transporter-associated domain PAJ_RS07965 IPR006037 Regulator of K+ conductance, C-terminal PAJ_RS07965 IPR006153 Cation/H+ exchanger PAJ_RS07965 IPR016166 FAD-binding, type 2 PAJ_RS07965 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 PAJ_RS07965 IPR023729 K(+)/H(+) antiporter NhaP2 PAJ_RS07965 IPR030151 PAJ_RS07965 PAJ_RS07970 IPR009950 Protein of unknown function DUF1480 PAJ_RS07975 IPR003362 Bacterial sugar transferase PAJ_RS07975 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP PAJ_RS07975 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase PAJ_RS07980 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG PAJ_RS07980 IPR004812 Drug resistance transporter Bcr/CmlA subfamily PAJ_RS07980 IPR005829 Sugar transporter, conserved site PAJ_RS07980 IPR011701 Major facilitator superfamily PAJ_RS07980 IPR020846 Major facilitator superfamily domain PAJ_RS07985 IPR000821 Alanine racemase PAJ_RS07985 IPR001608 Alanine racemase, N-terminal PAJ_RS07985 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal PAJ_RS07985 IPR011079 Alanine racemase, C-terminal PAJ_RS07985 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site PAJ_RS07985 IPR029066 PLP-binding barrel PAJ_RS07990 IPR006076 FAD dependent oxidoreductase PAJ_RS07990 IPR023080 D-amino acid dehydrogenase small subunit, DadA PAJ_RS07990 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS07995 IPR007390 Sporulation stage V, protein R PAJ_RS08000 IPR000524 Transcription regulator HTH, GntR PAJ_RS08000 IPR008920 Transcription regulator FadR/GntR, C-terminal PAJ_RS08000 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS08000 IPR014178 Fatty acid response transcription factor FadR PAJ_RS08000 IPR028374 FadR, C-terminal domain PAJ_RS08005 IPR003752 Disulphide bond formation protein DsbB/BdbC PAJ_RS08005 IPR022920 Disulphide bond formation protein DsbB PAJ_RS08005 IPR023380 Disulphide bond formation protein DsbB-like domain PAJ_RS08010 IPR005358 Putative zinc- or iron-chelating domain containing protein PAJ_RS08010 IPR008228 Uncharacterised conserved protein UCP006173 PAJ_RS08015 IPR011234 Fumarylacetoacetase, C-terminal-related PAJ_RS08020 IPR027354 YcgL domain PAJ_RS08025 IPR005526 Septum formation inhibitor MinC, C-terminal PAJ_RS08025 IPR007874 Septum formation inhibitor MinC, N-terminal PAJ_RS08025 IPR013033 Septum formation inhibitor MinC PAJ_RS08025 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal PAJ_RS08030 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PAJ_RS08030 IPR010223 ATP binding protein MinD, bacterial-type PAJ_RS08030 IPR025501 ATP binding protein MinD PAJ_RS08030 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS08035 IPR005527 Septum formation topological specificity factor MinE PAJ_RS08040 IPR002121 HRDC domain PAJ_RS08040 IPR002562 3'-5' exonuclease domain PAJ_RS08040 IPR006292 Ribonuclease D PAJ_RS08040 IPR010997 HRDC-like PAJ_RS08040 IPR012337 Ribonuclease H-like domain PAJ_RS08045 IPR000873 AMP-dependent synthetase/ligase PAJ_RS08045 IPR020845 AMP-binding, conserved site PAJ_RS08045 IPR025110 AMP-binding enzyme C-terminal domain PAJ_RS08050 IPR004658 Outer membrane lipoprotein Slp PAJ_RS08055 IPR000905 Gcp-like domain PAJ_RS08055 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ PAJ_RS08060 IPR006555 ATP-dependent helicase, C-terminal PAJ_RS08060 IPR010614 DEAD2 PAJ_RS08060 IPR011545 DEAD/DEAH box helicase domain PAJ_RS08060 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS08060 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS08065 IPR006175 YjgF/Yer057p/UK114 family PAJ_RS08065 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAJ_RS08065 IPR019897 YjgF-like protein, conserved site PAJ_RS08070 IPR005371 Uncharacterised protein family UPF0181 PAJ_RS08075 IPR005801 ADC synthase PAJ_RS08075 IPR005802 Para-aminobenzoate synthase, component I PAJ_RS08075 IPR006805 Anthranilate synthase component I, N-terminal PAJ_RS08075 IPR015890 Chorismate binding, C-terminal PAJ_RS08075 IPR019999 Anthranilate synthase component I - like PAJ_RS08080 IPR000059 NUDIX hydrolase, NudL, conserved site PAJ_RS08080 IPR000086 NUDIX hydrolase domain PAJ_RS08080 IPR015797 NUDIX hydrolase domain-like PAJ_RS08085 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form PAJ_RS08085 IPR005130 Serine dehydratase-like, alpha subunit PAJ_RS08085 IPR005131 Serine dehydratase beta chain PAJ_RS08085 IPR029009 Allosteric substrate binding domain PAJ_RS08090 IPR001633 EAL domain PAJ_RS08090 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain PAJ_RS08095 IPR005170 Transporter-associated domain PAJ_RS08095 IPR005496 Integral membrane protein TerC PAJ_RS08095 IPR016166 FAD-binding, type 2 PAJ_RS08095 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 PAJ_RS08100 IPR004701 Phosphotransferase system, mannose-type IIA component PAJ_RS08100 IPR004720 Phosphotransferase system, sorbose subfamily IIB component PAJ_RS08100 IPR013789 Phosphotransferase system, mannose family IIA component PAJ_RS08100 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup PAJ_RS08105 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit PAJ_RS08110 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component PAJ_RS08110 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup PAJ_RS08115 IPR009328 Protein of unknown function DUF986 PAJ_RS08120 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted PAJ_RS08120 IPR025714 Methyltransferase domain PAJ_RS08120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS08125 IPR002059 Cold-shock protein, DNA-binding PAJ_RS08125 IPR011129 Cold shock protein PAJ_RS08125 IPR012156 Cold shock, CspA PAJ_RS08125 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS08125 IPR019844 Cold-shock conserved site PAJ_RS08135 IPR025594 YebO-like protein PAJ_RS08140 IPR025611 YobH-like protein PAJ_RS08145 IPR005471 Transcription regulator IclR, N-terminal PAJ_RS08145 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS08145 IPR014757 Transcription regulator IclR, C-terminal PAJ_RS08145 IPR029016 GAF domain-like PAJ_RS08150 IPR011701 Major facilitator superfamily PAJ_RS08150 IPR020846 Major facilitator superfamily domain PAJ_RS08155 IPR001915 Peptidase M48 PAJ_RS08155 IPR022919 Peptidase M48, protease HtpX, putative PAJ_RS08160 IPR001478 PDZ domain PAJ_RS08160 IPR004447 C-terminal-processing peptidase S41A PAJ_RS08160 IPR005151 Tail specific protease PAJ_RS08160 IPR020992 Tail specific protease, C-terminal PAJ_RS08160 IPR029045 ClpP/crotonase-like domain PAJ_RS08165 IPR016103 ProQ/FinO domain PAJ_RS08165 IPR023529 Transporter ProP effector, ProQ PAJ_RS08170 IPR003018 GAF domain PAJ_RS08170 IPR029016 GAF domain-like PAJ_RS08175 IPR005219 Conserved hypothetical protein CHP00155 PAJ_RS08175 IPR007498 Paraquat-inducible protein A PAJ_RS08175 IPR011031 Multihaem cytochrome PAJ_RS08180 IPR003399 Mammalian cell entry-related PAJ_RS08185 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p PAJ_RS08185 IPR011023 Nop2p PAJ_RS08185 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site PAJ_RS08185 IPR023267 RNA (C5-cytosine) methyltransferase PAJ_RS08185 IPR023545 rRNA small subunit methyltransferase F PAJ_RS08185 IPR027391 rRNA small subunit methyltransferase F, C-terminal domain PAJ_RS08185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS08185 IPR031341 PAJ_RS08185 PAJ_RS08190 IPR010696 Protein of unknown function DUF1272 PAJ_RS08190 IPR013083 Zinc finger, RING/FYVE/PHD-type PAJ_RS08195 IPR011701 Major facilitator superfamily PAJ_RS08195 IPR020846 Major facilitator superfamily domain PAJ_RS08200 IPR000060 BCCT transporter family PAJ_RS08200 IPR018093 BCCT transporter, conserved site PAJ_RS08205 IPR001647 DNA-binding HTH domain, TetR-type PAJ_RS08205 IPR009057 Homeodomain-like PAJ_RS08205 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAJ_RS08205 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal PAJ_RS08205 IPR017757 Transcriptional repressor BetI PAJ_RS08205 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PAJ_RS08210 IPR011264 NAD/NADP-dependent betaine aldehyde dehydrogenase PAJ_RS08210 IPR015590 Aldehyde dehydrogenase domain PAJ_RS08210 IPR016160 Aldehyde dehydrogenase, cysteine active site PAJ_RS08210 IPR016161 Aldehyde/histidinol dehydrogenase PAJ_RS08210 IPR016162 Aldehyde dehydrogenase, N-terminal PAJ_RS08210 IPR016163 Aldehyde dehydrogenase, C-terminal PAJ_RS08210 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PAJ_RS08215 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal PAJ_RS08215 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal PAJ_RS08215 IPR011533 Oxygen-dependent choline dehydrogenase PAJ_RS08215 IPR012132 Glucose-methanol-choline oxidoreductase PAJ_RS08215 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS08220 IPR000390 Small multidrug resistance protein family PAJ_RS08220 IPR023740 Spermidine export protein MdtJ PAJ_RS08225 IPR000390 Small multidrug resistance protein family PAJ_RS08225 IPR023737 Spermidine export protein MdtI PAJ_RS08230 IPR000182 GNAT domain PAJ_RS08230 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS08235 IPR000847 Transcription regulator HTH, LysR PAJ_RS08235 IPR005119 LysR, substrate-binding PAJ_RS08235 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS08240 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS08240 IPR016040 NAD(P)-binding domain PAJ_RS08240 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS08255 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS08255 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS08255 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PAJ_RS08255 IPR024478 4HB MCP domain PAJ_RS08260 IPR000014 PAS domain PAJ_RS08260 IPR013978 MEKHLA PAJ_RS08265 IPR001088 Glycoside hydrolase, family 4 PAJ_RS08265 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal PAJ_RS08265 IPR016040 NAD(P)-binding domain PAJ_RS08265 IPR019802 Glycoside hydrolase, family 4, conserved site PAJ_RS08265 IPR022616 Glycosyl hydrolase, family 4, C-terminal PAJ_RS08270 IPR001996 Phosphotransferase system, IIB component, type 1 PAJ_RS08270 IPR003352 Phosphotransferase system, EIIC PAJ_RS08270 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component PAJ_RS08270 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component PAJ_RS08270 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site PAJ_RS08275 IPR000524 Transcription regulator HTH, GntR PAJ_RS08275 IPR011663 UbiC transcription regulator-associated PAJ_RS08275 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS08275 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAJ_RS08280 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS08280 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS08280 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PAJ_RS08280 IPR024478 4HB MCP domain PAJ_RS08285 IPR019648 Protein of unknown function DUF2511 PAJ_RS08290 IPR008457 Copper resistance D PAJ_RS08295 IPR007348 CopC domain PAJ_RS08295 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like PAJ_RS08295 IPR014756 Immunoglobulin E-set PAJ_RS08295 IPR032694 PAJ_RS08295 PAJ_RS08300 IPR009052 DNA polymerase III-theta, bacterial PAJ_RS08300 IPR011325 DNA polymerase III-theta, core, bacterial PAJ_RS08305 IPR012337 Ribonuclease H-like domain PAJ_RS08305 IPR013520 Exonuclease, RNase T/DNA polymerase III PAJ_RS08310 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain PAJ_RS08310 IPR002470 Peptidase S9A, prolyl oligopeptidase PAJ_RS08310 IPR023302 Peptidase S9A, N-terminal domain PAJ_RS08310 IPR029058 Alpha/Beta hydrolase fold PAJ_RS08315 IPR007486 Protein of unknown function DUF533 PAJ_RS08315 IPR029024 TerB-like PAJ_RS08320 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type PAJ_RS08320 IPR005862 Phosphoribosylglycinamide formyltransferase 2 PAJ_RS08320 IPR011054 Rudiment single hybrid motif PAJ_RS08320 IPR013815 ATP-grasp fold, subdomain 1 PAJ_RS08320 IPR013816 ATP-grasp fold, subdomain 2 PAJ_RS08320 IPR016185 Pre-ATP-grasp domain PAJ_RS08325 IPR000887 KDPG/KHG aldolase PAJ_RS08325 IPR013785 Aldolase-type TIM barrel PAJ_RS08325 IPR031337 PAJ_RS08325 PAJ_RS08325 IPR031338 PAJ_RS08325 PAJ_RS08330 IPR001282 Glucose-6-phosphate dehydrogenase PAJ_RS08330 IPR016040 NAD(P)-binding domain PAJ_RS08330 IPR019796 Glucose-6-phosphate dehydrogenase, active site PAJ_RS08330 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding PAJ_RS08330 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal PAJ_RS08335 IPR000281 Helix-turn-helix protein RpiR PAJ_RS08335 IPR001347 Sugar isomerase (SIS) PAJ_RS08335 IPR009057 Homeodomain-like PAJ_RS08335 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS08340 IPR001697 Pyruvate kinase PAJ_RS08340 IPR011037 Pyruvate kinase-like, insert domain PAJ_RS08340 IPR015793 Pyruvate kinase, barrel PAJ_RS08340 IPR015794 Pyruvate kinase, alpha/beta PAJ_RS08340 IPR015795 Pyruvate kinase, C-terminal PAJ_RS08340 IPR015806 Pyruvate kinase, beta-barrel insert domain PAJ_RS08340 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain PAJ_RS08340 IPR018209 Pyruvate kinase, active site PAJ_RS08345 IPR005829 Sugar transporter, conserved site PAJ_RS08345 IPR011701 Major facilitator superfamily PAJ_RS08345 IPR020846 Major facilitator superfamily domain PAJ_RS08350 IPR004960 Bacterial lipid A biosynthesis acyltransferase PAJ_RS08350 IPR011921 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase PAJ_RS08355 IPR007340 Opacity-associated protein A PAJ_RS08355 IPR011055 Duplicated hybrid motif PAJ_RS08355 IPR013731 Opacity-associated protein A, N-terminal PAJ_RS08355 IPR016047 Peptidase M23 PAJ_RS08355 IPR018392 LysM domain PAJ_RS08360 IPR006127 Periplasmic solute binding protein family PAJ_RS08365 IPR003439 ABC transporter-like PAJ_RS08365 IPR003593 AAA+ ATPase domain PAJ_RS08365 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS08370 IPR001626 ABC-3 PAJ_RS08370 IPR029022 ABC transporter, BtuC-like PAJ_RS08380 IPR000085 Bacterial DNA recombination protein RuvA PAJ_RS08380 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 PAJ_RS08380 IPR010994 RuvA domain 2-like PAJ_RS08380 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal PAJ_RS08380 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS08380 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial PAJ_RS08385 IPR002176 Crossover junction endodeoxyribonuclease RuvC PAJ_RS08385 IPR012337 Ribonuclease H-like domain PAJ_RS08385 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site PAJ_RS08390 IPR002876 Transcriptional regulator TACO1-like PAJ_RS08390 IPR017856 Integrase, N-terminal zinc-binding domain-like PAJ_RS08390 IPR026563 Transcriptional regulator TACO1-like, domain 2 PAJ_RS08390 IPR026564 Transcriptional regulator TACO1-like, domain 3 PAJ_RS08390 IPR029072 YebC-like PAJ_RS08395 IPR000086 NUDIX hydrolase domain PAJ_RS08395 IPR003564 dATP pyrophosphohydrolase PAJ_RS08395 IPR015797 NUDIX hydrolase domain-like PAJ_RS08395 IPR020084 NUDIX hydrolase, conserved site PAJ_RS08400 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb PAJ_RS08400 IPR004115 GAD-like domain PAJ_RS08400 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) PAJ_RS08400 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type PAJ_RS08400 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type PAJ_RS08400 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS08400 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like PAJ_RS08400 IPR029351 GAD domain PAJ_RS08405 IPR002763 Protein of unknown function DUF72 PAJ_RS08410 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein PAJ_RS08410 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain PAJ_RS08415 IPR005271 tRNA (cmo5U34)-methyltransferase PAJ_RS08415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS08420 IPR010017 tRNA (mo5U34)-methyltransferase PAJ_RS08420 IPR027555 tRNA (mo5U34)-methyltransferase-like PAJ_RS08420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS08425 IPR001123 Lysine-type exporter protein (LYSE/YGGA) PAJ_RS08430 IPR001670 Alcohol dehydrogenase, iron-type PAJ_RS08440 IPR005627 Copper homeostasis protein CutC PAJ_RS08440 IPR023648 Copper homeostasis CutC domain PAJ_RS08445 IPR004839 Aminotransferase, class I/classII PAJ_RS08445 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS08445 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS08445 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS08445 IPR027619 Putative C-S lyase PAJ_RS08450 IPR010393 Protein of unknown function DUF991 PAJ_RS08450 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAJ_RS08455 IPR001278 Arginine-tRNA ligase PAJ_RS08455 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PAJ_RS08455 IPR005148 Arginyl tRNA synthetase N-terminal domain PAJ_RS08455 IPR008909 DALR anticodon binding PAJ_RS08455 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding PAJ_RS08455 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS08465 IPR000425 Major intrinsic protein PAJ_RS08465 IPR022357 Major intrinsic protein, conserved site PAJ_RS08465 IPR023271 Aquaporin-like PAJ_RS08465 IPR023743 Aquaporin Z PAJ_RS08470 IPR009420 Flagellar FlhE PAJ_RS08475 IPR001712 Type III secretion system FHIPEP PAJ_RS08475 IPR006301 Flagellar biosynthesis protein FlhA PAJ_RS08475 IPR025505 FHIPEP conserved site PAJ_RS08480 IPR006135 Type III secretion system substrate exporter PAJ_RS08480 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB PAJ_RS08480 IPR029025 Type III secretion system substrate exporter, C-terminal PAJ_RS08485 IPR007439 Chemotaxis phosphatase, CheZ PAJ_RS08490 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS08490 IPR011006 CheY-like superfamily PAJ_RS08495 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase PAJ_RS08495 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS08495 IPR008248 Signal transduction response regulator, chemotaxis, CheB PAJ_RS08495 IPR011006 CheY-like superfamily PAJ_RS08500 IPR000780 MCP methyltransferase, CheR-type PAJ_RS08500 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal PAJ_RS08500 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal PAJ_RS08500 IPR026024 Chemotaxis protein methyltransferase CheR PAJ_RS08500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS08505 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding PAJ_RS08505 IPR003660 HAMP linker domain PAJ_RS08505 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS08505 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS08510 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding PAJ_RS08510 IPR003660 HAMP linker domain PAJ_RS08510 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS08510 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS08510 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PAJ_RS08515 IPR002545 CheW-like protein PAJ_RS08520 IPR002545 CheW-like protein PAJ_RS08520 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS08520 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS08520 IPR004105 Histidine kinase CheA-like, homodimeric domain PAJ_RS08520 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS08520 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PAJ_RS08520 IPR015162 CheY binding PAJ_RS08525 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal PAJ_RS08525 IPR025713 Motility protein B, N-terminal domain PAJ_RS08530 IPR000540 Flagellar motor protein MotA, conserved site PAJ_RS08530 IPR002898 MotA/TolQ/ExbB proton channel PAJ_RS08530 IPR022522 Flagellar motor stator, MotA PAJ_RS08535 IPR007944 Flagellar transcriptional activator FlhC PAJ_RS08540 IPR023559 Flagellar transcriptional activator FlhD PAJ_RS08545 IPR001830 Glycosyl transferase, family 20 PAJ_RS08545 IPR012766 Alpha,alpha-trehalose-phosphate synthase PAJ_RS08550 IPR003337 Trehalose-phosphatase PAJ_RS08550 IPR006379 HAD-superfamily hydrolase, subfamily IIB PAJ_RS08550 IPR023214 HAD-like domain PAJ_RS08555 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS08555 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS08555 IPR011006 CheY-like superfamily PAJ_RS08555 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS08555 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS08560 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS08560 IPR003660 HAMP linker domain PAJ_RS08560 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS08560 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS08565 IPR002569 Peptide methionine sulphoxide reductase MsrA PAJ_RS08565 IPR028427 Peptide methionine sulfoxide reductase PAJ_RS08585 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS08585 IPR032758 PAJ_RS08585 PAJ_RS08590 IPR009387 Toxin HigB PAJ_RS08595 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS08595 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates PAJ_RS08595 IPR015168 SsuA/THI5-like PAJ_RS08600 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS08600 IPR002078 RNA polymerase sigma factor 54 interaction domain PAJ_RS08600 IPR002197 DNA binding HTH domain, Fis-type PAJ_RS08600 IPR003593 AAA+ ATPase domain PAJ_RS08600 IPR009057 Homeodomain-like PAJ_RS08600 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates PAJ_RS08600 IPR015168 SsuA/THI5-like PAJ_RS08600 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAJ_RS08600 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAJ_RS08600 IPR025944 Sigma-54 interaction domain, conserved site PAJ_RS08600 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS08605 IPR011251 Luciferase-like domain PAJ_RS08605 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent PAJ_RS08610 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS08615 IPR011251 Luciferase-like domain PAJ_RS08615 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A PAJ_RS08620 IPR005828 General substrate transporter PAJ_RS08620 IPR020846 Major facilitator superfamily domain PAJ_RS08625 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PAJ_RS08625 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain PAJ_RS08625 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain PAJ_RS08625 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal PAJ_RS08630 IPR003714 PhoH-like protein PAJ_RS08630 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS08635 IPR006313 Deferrochelatase/peroxidase EfeB PAJ_RS08635 IPR006314 Dyp-type peroxidase PAJ_RS08635 IPR011008 Dimeric alpha-beta barrel PAJ_RS08640 IPR008972 Cupredoxin PAJ_RS08640 IPR028096 EfeO-type cupredoxin-like domain PAJ_RS08645 IPR004923 Iron permease FTR1/Fip1/EfeU PAJ_RS08645 IPR005217 Iron permease FTR1-like PAJ_RS08650 IPR001734 Sodium/solute symporter PAJ_RS08650 IPR011851 Sodium/proline symporter PAJ_RS08650 IPR018212 Sodium/solute symporter, conserved site PAJ_RS08655 IPR002872 Proline dehydrogenase domain PAJ_RS08655 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 PAJ_RS08655 IPR010985 Ribbon-helix-helix PAJ_RS08655 IPR015590 Aldehyde dehydrogenase domain PAJ_RS08655 IPR016160 Aldehyde dehydrogenase, cysteine active site PAJ_RS08655 IPR016161 Aldehyde/histidinol dehydrogenase PAJ_RS08655 IPR016162 Aldehyde dehydrogenase, N-terminal PAJ_RS08655 IPR016163 Aldehyde dehydrogenase, C-terminal PAJ_RS08655 IPR024082 Proline dehydrogenase PutA, domain II PAJ_RS08655 IPR024089 Proline dehydrogenase PutA, domain I/II PAJ_RS08655 IPR024090 Proline dehydrogenase PutA, domain I PAJ_RS08655 IPR025703 Bifunctional protein PutA PAJ_RS08655 IPR029041 FAD-linked oxidoreductase-like PAJ_RS08655 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PAJ_RS08660 IPR023234 NarG-like domain PAJ_RS08665 IPR002656 Acyltransferase 3 PAJ_RS08670 IPR000086 NUDIX hydrolase domain PAJ_RS08670 IPR004385 Nucleoside diphosphate pyrophosphatase PAJ_RS08670 IPR015797 NUDIX hydrolase domain-like PAJ_RS08675 IPR002656 Acyltransferase 3 PAJ_RS08680 IPR003439 ABC transporter-like PAJ_RS08680 IPR003593 AAA+ ATPase domain PAJ_RS08680 IPR017871 ABC transporter, conserved site PAJ_RS08680 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS08680 IPR030679 PAJ_RS08680 PAJ_RS08685 IPR000515 MetI-like domain PAJ_RS08685 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS08690 IPR001320 Ionotropic glutamate receptor PAJ_RS08690 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS08690 IPR018313 Extracellular solute-binding protein, family 3, conserved site PAJ_RS08695 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAJ_RS08695 IPR005966 D-cysteine desulfhydrase PAJ_RS08695 IPR023702 D-cysteine desulphhydrase, bacterial PAJ_RS08695 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase PAJ_RS08700 IPR004107 Integrase, SAM-like, N-terminal PAJ_RS08700 IPR022523 Flagellar regulator, FliZ PAJ_RS08705 IPR000943 RNA polymerase sigma-70 PAJ_RS08705 IPR007624 RNA polymerase sigma-70 region 3 PAJ_RS08705 IPR007627 RNA polymerase sigma-70 region 2 PAJ_RS08705 IPR007630 RNA polymerase sigma-70 region 4 PAJ_RS08705 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS08705 IPR012845 RNA polymerase sigma factor, FliA/WhiG PAJ_RS08705 IPR013324 RNA polymerase sigma factor, region 3/4 PAJ_RS08705 IPR013325 RNA polymerase sigma factor, region 2 PAJ_RS08705 IPR014284 RNA polymerase sigma-70 like domain PAJ_RS08705 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE PAJ_RS08705 IPR028617 RNA polymerase sigma factor FliA PAJ_RS08710 IPR003615 HNH nuclease PAJ_RS08715 IPR005835 Nucleotidyl transferase PAJ_RS08715 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form PAJ_RS08715 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS08720 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related PAJ_RS08720 IPR011051 RmlC-like cupin domain PAJ_RS08720 IPR014710 RmlC-like jelly roll fold PAJ_RS08725 IPR005913 dTDP-4-dehydrorhamnose reductase PAJ_RS08725 IPR016040 NAD(P)-binding domain PAJ_RS08725 IPR029903 PAJ_RS08725 PAJ_RS08735 IPR008670 Acyl-CoA reductase, LuxC PAJ_RS08740 IPR007534 Acyl-protein synthetase, LuxE PAJ_RS08745 IPR000873 AMP-dependent synthetase/ligase PAJ_RS08745 IPR020845 AMP-binding, conserved site PAJ_RS08750 IPR005475 Transketolase-like, pyrimidine-binding domain PAJ_RS08750 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II PAJ_RS08750 IPR029061 Thiamin diphosphate-binding fold PAJ_RS08750 IPR033247 PAJ_RS08750 PAJ_RS08750 IPR033248 PAJ_RS08750 PAJ_RS08755 IPR005474 Transketolase, N-terminal PAJ_RS08755 IPR029061 Thiamin diphosphate-binding fold PAJ_RS08755 IPR033247 PAJ_RS08755 PAJ_RS08760 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS08760 IPR016040 NAD(P)-binding domain PAJ_RS08760 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS08765 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS08765 IPR016040 NAD(P)-binding domain PAJ_RS08770 IPR009081 Acyl carrier protein-like PAJ_RS08775 IPR006342 Methyltransferase FkbM PAJ_RS08775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS08780 IPR001451 Bacterial transferase hexapeptide repeat PAJ_RS08780 IPR011004 Trimeric LpxA-like PAJ_RS08780 IPR018357 Hexapeptide transferase, conserved site PAJ_RS08785 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PAJ_RS08785 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS08785 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS08785 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS08790 IPR001173 Glycosyltransferase 2-like PAJ_RS08790 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS08795 IPR001173 Glycosyltransferase 2-like PAJ_RS08795 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS08800 IPR001029 Flagellin, D0/D1 domain PAJ_RS08800 IPR001492 Flagellin PAJ_RS08805 IPR001029 Flagellin, D0/D1 domain PAJ_RS08805 IPR001492 Flagellin PAJ_RS08810 IPR001029 Flagellin, D0/D1 domain PAJ_RS08810 IPR001492 Flagellin PAJ_RS08815 IPR001029 Flagellin, D0/D1 domain PAJ_RS08815 IPR001492 Flagellin PAJ_RS08820 IPR003481 Flagellar hook-associated protein 2, N-terminal PAJ_RS08820 IPR010809 Flagellar hook-associated 2, C-terminal PAJ_RS08825 IPR003713 Flagellar protein FliS PAJ_RS08830 IPR008622 Flagellar protein FliT PAJ_RS08835 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PAJ_RS08835 IPR013776 Alpha-amylase, thermostable PAJ_RS08835 IPR013780 Glycosyl hydrolase, family 13, all-beta PAJ_RS08835 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS08835 IPR015902 Glycoside hydrolase, family 13 PAJ_RS08835 IPR017853 Glycoside hydrolase, superfamily PAJ_RS08840 IPR025596 YedD-like protein PAJ_RS08850 IPR019732 Sigma-S stabilisation anti-adaptor protein PAJ_RS08855 IPR010391 DNA damage-inducible protein DinI-like PAJ_RS08870 IPR001624 Flagellar hook-basal body complex protein FliE PAJ_RS08875 IPR000067 Flagellar M-ring protein FliF PAJ_RS08875 IPR006182 Secretory protein YscJ/FliF PAJ_RS08875 IPR013556 Flagellar M-ring C-terminal PAJ_RS08880 IPR000090 Flagellar motor switch protein FliG PAJ_RS08880 IPR011002 Flagellar motor switch protein FliG, alpha-helical PAJ_RS08880 IPR023087 PAJ_RS08880 PAJ_RS08880 IPR028263 Flagellar motor switch protein FliG, N-terminal domain PAJ_RS08880 IPR032779 PAJ_RS08880 PAJ_RS08885 IPR000563 Flagellar assembly protein FliH PAJ_RS08885 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE PAJ_RS08890 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain PAJ_RS08890 IPR003593 AAA+ ATPase domain PAJ_RS08890 IPR005714 ATPase, type III secretion system, FliI/YscN PAJ_RS08890 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site PAJ_RS08890 IPR020005 Flagellar export ATPase FliI, clade 1 PAJ_RS08890 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS08890 IPR032463 PAJ_RS08890 PAJ_RS08895 IPR012823 Flagellar export FliJ PAJ_RS08895 IPR018006 Flagellar FliJ, proteobacteria PAJ_RS08900 IPR001635 Flagellar hook-length control protein FliK PAJ_RS08900 IPR021136 Flagellar hook-length control protein-like, C-terminal PAJ_RS08905 IPR005503 Flagellar basal body-associated protein FliL PAJ_RS08910 IPR001543 Surface presentation of antigen (SpoA) PAJ_RS08910 IPR001689 Flagellar motor switch protein FliM PAJ_RS08910 IPR028976 CheC-like domain PAJ_RS08915 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb PAJ_RS08915 IPR001543 Surface presentation of antigen (SpoA) PAJ_RS08915 IPR012826 Flagellar motor switch FliN PAJ_RS08915 IPR031576 PAJ_RS08915 PAJ_RS08920 IPR022781 Flagellar biosynthesis protein, FliO PAJ_RS08925 IPR005837 Flagellar transport protein FliP PAJ_RS08925 IPR005838 Type III secretion system inner membrane P protein PAJ_RS08930 IPR002191 Bacterial export protein family 3 PAJ_RS08930 IPR006305 Flagellar biosynthesis protein FliQ PAJ_RS08935 IPR002010 Type III secretion system inner membrane R protein PAJ_RS08935 IPR006303 Flagellar biosynthesis protein FliR PAJ_RS08940 IPR000792 Transcription regulator LuxR, C-terminal PAJ_RS08940 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS08940 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS08940 IPR030866 PAJ_RS08940 PAJ_RS08945 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding PAJ_RS08945 IPR003660 HAMP linker domain PAJ_RS08945 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS08945 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS08945 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PAJ_RS08950 IPR019717 Dextransucrase DSRB PAJ_RS08960 IPR019669 Uncharacterised bacterial stress protein YodD PAJ_RS08965 IPR006379 HAD-superfamily hydrolase, subfamily IIB PAJ_RS08965 IPR006381 HAD-superfamily hydrolase, superfamily IIB, YedP PAJ_RS08965 IPR023214 HAD-like domain PAJ_RS08970 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS08975 IPR019226 Protein of unknown function DUF2158 PAJ_RS08980 IPR008526 Inner membrane protein YedI PAJ_RS08990 IPR004603 DNA mismatch endonuclease vsr PAJ_RS08990 IPR011335 Restriction endonuclease type II-like PAJ_RS08995 IPR001525 C-5 cytosine methyltransferase PAJ_RS08995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS08995 IPR031303 PAJ_RS08995 PAJ_RS09000 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding PAJ_RS09000 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS09000 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS09005 IPR005569 Arc-like DNA binding PAJ_RS09005 IPR010985 Ribbon-helix-helix PAJ_RS09005 IPR013321 Arc-type ribbon-helix-helix PAJ_RS09010 IPR003607 HD/PDEase domain PAJ_RS09010 IPR006674 HD domain PAJ_RS09020 IPR010384 MtfA family PAJ_RS09020 IPR024079 Metallopeptidase, catalytic domain PAJ_RS09030 IPR003477 mRNA interferase PemK-like protein PAJ_RS09030 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor PAJ_RS09035 IPR007159 AbrB-like domain PAJ_RS09040 IPR001015 Ferrochelatase PAJ_RS09040 IPR019772 Ferrochelatase, active site PAJ_RS09045 IPR010290 Transmembrane secretion effector PAJ_RS09045 IPR020846 Major facilitator superfamily domain PAJ_RS09050 IPR001646 Pentapeptide repeat PAJ_RS09055 IPR000522 ABC transporter, permease protein PAJ_RS09055 IPR029022 ABC transporter, BtuC-like PAJ_RS09060 IPR002491 ABC transporter periplasmic binding domain PAJ_RS09065 IPR003439 ABC transporter-like PAJ_RS09065 IPR003593 AAA+ ATPase domain PAJ_RS09065 IPR017871 ABC transporter, conserved site PAJ_RS09065 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS09075 IPR002068 Alpha crystallin/Hsp20 domain PAJ_RS09075 IPR008978 HSP20-like chaperone PAJ_RS09075 IPR031107 PAJ_RS09075 PAJ_RS09080 IPR016963 Glycoporin RafY PAJ_RS09085 IPR002178 PTS EIIA type-2 domain PAJ_RS09085 IPR011608 PRD domain PAJ_RS09085 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS09085 IPR013196 Helix-turn-helix, type 11 PAJ_RS09085 IPR016152 Phosphotransferase/anion transporter PAJ_RS09095 IPR003352 Phosphotransferase system, EIIC PAJ_RS09095 IPR006327 Phosphotransferase system, fructose IIC component PAJ_RS09100 IPR003353 Phosphotransferase system, fructose-specific IIB subunit PAJ_RS09100 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PAJ_RS09105 IPR002178 PTS EIIA type-2 domain PAJ_RS09105 IPR004715 Phosphotransferase system, IIA component fructose subfamily PAJ_RS09105 IPR016152 Phosphotransferase/anion transporter PAJ_RS09125 IPR001826 RHS protein PAJ_RS09135 IPR001826 RHS protein PAJ_RS09135 IPR006530 YD repeat PAJ_RS09135 IPR008727 PAAR motif PAJ_RS09135 IPR022385 Rhs repeat-associated core PAJ_RS09135 IPR031325 PAJ_RS09135 PAJ_RS09140 IPR014894 Protein DcrB PAJ_RS09140 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich PAJ_RS09150 IPR009739 Protein of unknown function DUF1311 PAJ_RS09165 IPR025425 Domain of unknown function DUF4150 PAJ_RS09170 IPR021927 Protein of unknown function DUF3540 PAJ_RS09175 IPR001646 Pentapeptide repeat PAJ_RS09180 IPR001646 Pentapeptide repeat PAJ_RS09180 IPR018683 Domain of unknown function DUF2169 PAJ_RS09210 IPR000719 Protein kinase domain PAJ_RS09210 IPR011009 Protein kinase-like domain PAJ_RS09210 IPR017441 Protein kinase, ATP binding site PAJ_RS09215 IPR001270 ClpA/B family PAJ_RS09215 IPR003593 AAA+ ATPase domain PAJ_RS09215 IPR003959 ATPase, AAA-type, core PAJ_RS09215 IPR004176 Clp, N-terminal PAJ_RS09215 IPR017729 Type VI secretion system, ATPase ClpV1 PAJ_RS09215 IPR018368 ClpA/B, conserved site 1 PAJ_RS09215 IPR019489 Clp ATPase, C-terminal PAJ_RS09215 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS09220 IPR010732 Protein of unknown function DUF1305 PAJ_RS09225 IPR010272 Type VI secretion system, VCA0110 PAJ_RS09230 IPR007048 GpW/Gp25/anti-adapter protein IraD PAJ_RS09230 IPR017737 Type VI secretion system, lysozyme-related protein PAJ_RS09235 IPR009211 Predicted virulence protein, SciE type PAJ_RS09245 IPR001932 Protein phosphatase 2C (PP2C)-like domain PAJ_RS09245 IPR015655 Protein phosphatase 2C PAJ_RS09250 IPR000253 Forkhead-associated (FHA) domain PAJ_RS09250 IPR008984 SMAD/FHA domain PAJ_RS09250 IPR017735 Type VI secretion system, FHA domain-containing protein PAJ_RS09255 IPR009739 Protein of unknown function DUF1311 PAJ_RS09260 IPR002477 Peptidoglycan binding-like PAJ_RS09260 IPR031922 PAJ_RS09260 PAJ_RS09265 IPR008514 Type VI secretion system effector, Hcp PAJ_RS09270 IPR010269 Protein of unknown function DUF877 PAJ_RS09275 IPR008312 Uncharacterised conserved protein UCP028301 PAJ_RS09280 IPR010657 ImpA, N-terminal PAJ_RS09280 IPR017740 Type VI secretion system-associated, ImpA PAJ_RS09285 IPR017748 Type VI secretion system-associated, BMAA0400 PAJ_RS09295 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal PAJ_RS09295 IPR017732 Type IV / VI secretion system, DotU PAJ_RS09295 IPR017733 Type VI secretion system, OmpA/MotB domain PAJ_RS09300 IPR010263 Protein of unknown function DUF876 PAJ_RS09305 IPR017734 Type VI secretion system, lipoprotein SciN PAJ_RS09315 IPR002528 Multi antimicrobial extrusion protein PAJ_RS09320 IPR000845 Nucleoside phosphorylase domain PAJ_RS09320 IPR011271 AMP nucleosidase PAJ_RS09320 IPR018017 Nucleoside phosphorylase PAJ_RS09320 IPR018953 AMP nucleoside phosphorylase, N-terminal PAJ_RS09330 IPR006043 Xanthine/uracil/vitamin C permease PAJ_RS09330 IPR026033 Purine permease PbuG-like PAJ_RS09330 IPR029940 PAJ_RS09330 PAJ_RS09335 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS09335 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS09335 IPR011006 CheY-like superfamily PAJ_RS09335 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS09335 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS09340 IPR011611 Carbohydrate kinase PfkB PAJ_RS09340 IPR029056 Ribokinase-like PAJ_RS09345 IPR000771 Ketose-bisphosphate aldolase, class-II PAJ_RS09345 IPR013785 Aldolase-type TIM barrel PAJ_RS09350 IPR010864 Protein of unknown function DUF1498 PAJ_RS09350 IPR011051 RmlC-like cupin domain PAJ_RS09355 IPR025997 Periplasmic binding protein domain PAJ_RS09355 IPR028082 Periplasmic binding protein-like I PAJ_RS09360 IPR001851 ABC transporter, permease PAJ_RS09365 IPR003439 ABC transporter-like PAJ_RS09365 IPR003593 AAA+ ATPase domain PAJ_RS09365 IPR017871 ABC transporter, conserved site PAJ_RS09365 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS09370 IPR000014 PAS domain PAJ_RS09370 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS09370 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS09370 IPR003660 HAMP linker domain PAJ_RS09370 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS09370 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS09370 IPR011006 CheY-like superfamily PAJ_RS09375 IPR000515 MetI-like domain PAJ_RS09375 IPR005769 ABC transporter, permease PhnE/PtxC PAJ_RS09380 IPR000515 MetI-like domain PAJ_RS09380 IPR005769 ABC transporter, permease PhnE/PtxC PAJ_RS09385 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein PAJ_RS09385 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein PAJ_RS09390 IPR003439 ABC transporter-like PAJ_RS09390 IPR003593 AAA+ ATPase domain PAJ_RS09390 IPR012693 ABC transporter, phosphonate import, PhnC PAJ_RS09390 IPR017871 ABC transporter, conserved site PAJ_RS09390 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS09395 IPR001279 Beta-lactamase-like PAJ_RS09395 IPR017693 Phosphonate metabolism protein PhnP PAJ_RS09400 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PAJ_RS09400 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN PAJ_RS09400 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS09405 IPR011059 Metal-dependent hydrolase, composite domain PAJ_RS09405 IPR012696 Phosphonate metabolism PhnM PAJ_RS09405 IPR013108 Amidohydrolase 3 PAJ_RS09405 IPR032466 PAJ_RS09405 PAJ_RS09410 IPR003439 ABC transporter-like PAJ_RS09410 IPR003593 AAA+ ATPase domain PAJ_RS09410 IPR012701 Phosphonate C-P lyase system, PhnL PAJ_RS09410 IPR017871 ABC transporter, conserved site PAJ_RS09410 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS09415 IPR003439 ABC transporter-like PAJ_RS09415 IPR003593 AAA+ ATPase domain PAJ_RS09415 IPR012700 Phosphonate C-P lyase system, PhnK PAJ_RS09415 IPR017871 ABC transporter, conserved site PAJ_RS09415 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS09420 IPR010306 Phosphonate metabolism PhnJ PAJ_RS09430 IPR008772 Bacterial phosphonate metabolism, PhnH PAJ_RS09435 IPR009609 Phosphonate metabolism PhnG PAJ_RS09445 IPR000868 Isochorismatase-like PAJ_RS09450 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin PAJ_RS09450 IPR030191 PAJ_RS09450 PAJ_RS09455 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAJ_RS09455 IPR011050 Pectin lyase fold/virulence factor PAJ_RS09455 IPR012332 P22 tailspike C-terminal domain-like PAJ_RS09455 IPR013425 Autotransporter-associated beta strand repeat PAJ_RS09460 IPR000485 AsnC-type HTH domain PAJ_RS09460 IPR011008 Dimeric alpha-beta barrel PAJ_RS09460 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS09460 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PAJ_RS09460 IPR019887 Transcription regulator AsnC-type, C-terminal PAJ_RS09460 IPR019888 Transcription regulator AsnC-type PAJ_RS09465 IPR004632 4-aminobutyrate aminotransferase, bacterial PAJ_RS09465 IPR005814 Aminotransferase class-III PAJ_RS09465 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS09465 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS09465 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS09470 IPR002933 Peptidase M20 PAJ_RS09470 IPR011650 Peptidase M20, dimerisation domain PAJ_RS09470 IPR017439 Amidohydrolase PAJ_RS09475 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PAJ_RS09475 IPR016040 NAD(P)-binding domain PAJ_RS09480 IPR000182 GNAT domain PAJ_RS09480 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS09485 IPR006076 FAD dependent oxidoreductase PAJ_RS09485 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS09490 IPR003439 ABC transporter-like PAJ_RS09490 IPR003593 AAA+ ATPase domain PAJ_RS09490 IPR017871 ABC transporter, conserved site PAJ_RS09490 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS09495 IPR000515 MetI-like domain PAJ_RS09500 IPR000515 MetI-like domain PAJ_RS09505 IPR000914 Bacterial extracellular solute-binding protein, family 5 PAJ_RS09505 IPR030678 PAJ_RS09505 PAJ_RS09510 IPR006076 FAD dependent oxidoreductase PAJ_RS09510 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS09515 IPR006328 Haloacid dehalogenase, type II PAJ_RS09515 IPR006439 HAD hydrolase, subfamily IA PAJ_RS09515 IPR023214 HAD-like domain PAJ_RS09520 IPR015590 Aldehyde dehydrogenase domain PAJ_RS09520 IPR016161 Aldehyde/histidinol dehydrogenase PAJ_RS09520 IPR016162 Aldehyde dehydrogenase, N-terminal PAJ_RS09520 IPR016163 Aldehyde dehydrogenase, C-terminal PAJ_RS09520 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PAJ_RS09525 IPR010102 Succinate semialdehyde dehydrogenase PAJ_RS09525 IPR015590 Aldehyde dehydrogenase domain PAJ_RS09525 IPR016160 Aldehyde dehydrogenase, cysteine active site PAJ_RS09525 IPR016161 Aldehyde/histidinol dehydrogenase PAJ_RS09525 IPR016162 Aldehyde dehydrogenase, N-terminal PAJ_RS09525 IPR016163 Aldehyde dehydrogenase, C-terminal PAJ_RS09525 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PAJ_RS09530 IPR000847 Transcription regulator HTH, LysR PAJ_RS09530 IPR005119 LysR, substrate-binding PAJ_RS09530 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS09535 IPR000847 Transcription regulator HTH, LysR PAJ_RS09535 IPR005119 LysR, substrate-binding PAJ_RS09535 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS09540 IPR001851 ABC transporter, permease PAJ_RS09545 IPR003439 ABC transporter-like PAJ_RS09545 IPR003593 AAA+ ATPase domain PAJ_RS09545 IPR017871 ABC transporter, conserved site PAJ_RS09545 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS09550 IPR025997 Periplasmic binding protein domain PAJ_RS09550 IPR028082 Periplasmic binding protein-like I PAJ_RS09560 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS09560 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS09560 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PAJ_RS09560 IPR024478 4HB MCP domain PAJ_RS09565 IPR001041 2Fe-2S ferredoxin-type domain PAJ_RS09565 IPR012675 Beta-grasp domain PAJ_RS09570 IPR001604 DNA/RNA non-specific endonuclease PAJ_RS09570 IPR009003 Trypsin-like cysteine/serine peptidase domain PAJ_RS09570 IPR020821 Extracellular Endonuclease, subunit A PAJ_RS09585 IPR032877 PAJ_RS09585 PAJ_RS09590 IPR000485 AsnC-type HTH domain PAJ_RS09590 IPR011008 Dimeric alpha-beta barrel PAJ_RS09590 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS09590 IPR019887 Transcription regulator AsnC-type, C-terminal PAJ_RS09590 IPR019888 Transcription regulator AsnC-type PAJ_RS09595 IPR001123 Lysine-type exporter protein (LYSE/YGGA) PAJ_RS09600 IPR001647 DNA-binding HTH domain, TetR-type PAJ_RS09600 IPR009057 Homeodomain-like PAJ_RS09600 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAJ_RS09600 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal PAJ_RS09605 IPR006094 FAD linked oxidase, N-terminal PAJ_RS09605 IPR007173 D-arabinono-1,4-lactone oxidase PAJ_RS09605 IPR010031 Sugar 1,4-lactone oxidase PAJ_RS09605 IPR016164 FAD-linked oxidase-like, C-terminal PAJ_RS09605 IPR016166 FAD-binding, type 2 PAJ_RS09605 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 PAJ_RS09610 IPR002495 Glycosyl transferase, family 8 PAJ_RS09610 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS09615 IPR000683 Oxidoreductase, N-terminal PAJ_RS09615 IPR004104 Oxidoreductase, C-terminal PAJ_RS09615 IPR016040 NAD(P)-binding domain PAJ_RS09625 IPR001387 Cro/C1-type helix-turn-helix domain PAJ_RS09625 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS09630 IPR008000 Rhamnose mutarotase PAJ_RS09630 IPR011008 Dimeric alpha-beta barrel PAJ_RS09630 IPR013448 L-rhamnose 1-epimerase PAJ_RS09635 IPR001303 Class II aldolase/adducin N-terminal PAJ_RS09635 IPR013447 Rhamnulose-1-phosphate aldolase PAJ_RS09640 IPR009308 Rhamnose isomerase PAJ_RS09640 IPR013022 Xylose isomerase-like, TIM barrel domain PAJ_RS09645 IPR000577 PAJ_RS09645 PAJ_RS09645 IPR013449 Rhamnulokinase PAJ_RS09645 IPR018484 Carbohydrate kinase, FGGY, N-terminal PAJ_RS09645 IPR018485 Carbohydrate kinase, FGGY, C-terminal PAJ_RS09650 IPR003313 AraC-type arabinose-binding/dimerisation domain PAJ_RS09650 IPR009057 Homeodomain-like PAJ_RS09650 IPR011051 RmlC-like cupin domain PAJ_RS09650 IPR014710 RmlC-like jelly roll fold PAJ_RS09650 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS09650 IPR018062 HTH domain AraC-type, conserved site PAJ_RS09650 IPR020449 Transcription regulator HTH, AraC- type PAJ_RS09655 IPR003313 AraC-type arabinose-binding/dimerisation domain PAJ_RS09655 IPR009057 Homeodomain-like PAJ_RS09655 IPR014710 RmlC-like jelly roll fold PAJ_RS09655 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS09655 IPR018062 HTH domain AraC-type, conserved site PAJ_RS09655 IPR020449 Transcription regulator HTH, AraC- type PAJ_RS09655 IPR023699 Transcription activator HTH, RhaR PAJ_RS09660 IPR004673 L-rhamnose-proton symport, RhaT PAJ_RS09665 IPR015590 Aldehyde dehydrogenase domain PAJ_RS09665 IPR016160 Aldehyde dehydrogenase, cysteine active site PAJ_RS09665 IPR016161 Aldehyde/histidinol dehydrogenase PAJ_RS09665 IPR016162 Aldehyde dehydrogenase, N-terminal PAJ_RS09665 IPR016163 Aldehyde dehydrogenase, C-terminal PAJ_RS09665 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PAJ_RS09670 IPR014944 Toxin SymE-like PAJ_RS09680 IPR008514 Type VI secretion system effector, Hcp PAJ_RS09685 IPR008514 Type VI secretion system effector, Hcp PAJ_RS09690 IPR011251 Luciferase-like domain PAJ_RS09695 IPR003710 Ketopantoate reductase ApbA/PanE PAJ_RS09695 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS09695 IPR013328 Dehydrogenase, multihelical PAJ_RS09695 IPR013332 Ketopantoate reductase, N-terminal domain PAJ_RS09695 IPR013752 Ketopantoate reductase, C-terminal domain PAJ_RS09695 IPR016040 NAD(P)-binding domain PAJ_RS09700 IPR000843 Transcription regulator HTH, LacI PAJ_RS09700 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS09700 IPR028082 Periplasmic binding protein-like I PAJ_RS09705 IPR007458 Protein of unknown function DUF496 PAJ_RS09715 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal PAJ_RS09715 IPR012338 Beta-lactamase/transpeptidase-like PAJ_RS09715 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal PAJ_RS09715 IPR015956 Penicillin-binding protein-associated PAJ_RS09715 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A PAJ_RS09720 IPR012337 Ribonuclease H-like domain PAJ_RS09720 IPR013520 Exonuclease, RNase T/DNA polymerase III PAJ_RS09720 IPR013620 Exonuclease C-terminal PAJ_RS09720 IPR023607 Exodeoxyribonuclease I PAJ_RS09725 IPR003474 Gluconate transporter PAJ_RS09730 IPR013022 Xylose isomerase-like, TIM barrel domain PAJ_RS09730 IPR026040 Hydroxypyruvate isomerase-like PAJ_RS09735 IPR001303 Class II aldolase/adducin N-terminal PAJ_RS09740 IPR010737 Protein of unknown function, DUF1537 PAJ_RS09740 IPR031475 PAJ_RS09740 PAJ_RS09745 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site PAJ_RS09745 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding PAJ_RS09745 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS09745 IPR013328 Dehydrogenase, multihelical PAJ_RS09745 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type PAJ_RS09745 IPR016040 NAD(P)-binding domain PAJ_RS09745 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain PAJ_RS09750 IPR001034 HTH DeoR N-terminal domain PAJ_RS09750 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS09750 IPR014036 DeoR C-terminal sensor domain PAJ_RS09750 IPR018356 Transcription regulator, HTH DeoR-type, conserved site PAJ_RS09755 IPR002293 Amino acid/polyamine transporter I PAJ_RS09760 IPR008146 Glutamine synthetase, catalytic domain PAJ_RS09760 IPR008147 Glutamine synthetase, beta-Grasp PAJ_RS09760 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain PAJ_RS09760 IPR027303 Glutamine synthetase, glycine-rich site PAJ_RS09765 IPR011697 Peptidase C26 PAJ_RS09765 IPR029062 Class I glutamine amidotransferase-like PAJ_RS09775 IPR006076 FAD dependent oxidoreductase PAJ_RS09775 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS09780 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain PAJ_RS09780 IPR016040 NAD(P)-binding domain PAJ_RS09785 IPR001348 ATP phosphoribosyltransferase HisG PAJ_RS09785 IPR011322 Nitrogen regulatory PII-like, alpha/beta PAJ_RS09785 IPR013115 Histidine biosynthesis HisG, C-terminal PAJ_RS09785 IPR013820 ATP phosphoribosyltransferase, catalytic domain PAJ_RS09785 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PAJ_RS09785 IPR018198 ATP phosphoribosyltransferase, conserved site PAJ_RS09785 IPR020621 ATP phosphoribosyltransferase HisG, long form PAJ_RS09790 IPR001692 Histidinol dehydrogenase, conserved site PAJ_RS09790 IPR012131 Histidinol dehydrogenase PAJ_RS09790 IPR016161 Aldehyde/histidinol dehydrogenase PAJ_RS09790 IPR022695 Histidinol dehydrogenase, monofunctional PAJ_RS09795 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site PAJ_RS09795 IPR004839 Aminotransferase, class I/classII PAJ_RS09795 IPR005861 Histidinol-phosphate aminotransferase family PAJ_RS09795 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS09795 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS09795 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS09800 IPR000807 Imidazoleglycerol-phosphate dehydratase PAJ_RS09800 IPR005954 Histidinol-phosphatase PAJ_RS09800 IPR006543 Histidinol-phosphate phosphatase PAJ_RS09800 IPR006549 HAD-superfamily hydrolase,subfamily IIIA PAJ_RS09800 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site PAJ_RS09800 IPR020566 Histidine biosynthesis bifunctional protein HisB PAJ_RS09800 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS09800 IPR023214 HAD-like domain PAJ_RS09805 IPR010139 Imidazole glycerol phosphate synthase, subunit H PAJ_RS09805 IPR017926 Glutamine amidotransferase PAJ_RS09805 IPR029062 Class I glutamine amidotransferase-like PAJ_RS09810 IPR006062 Histidine biosynthesis PAJ_RS09810 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA PAJ_RS09810 IPR011060 Ribulose-phosphate binding barrel PAJ_RS09810 IPR013785 Aldolase-type TIM barrel PAJ_RS09810 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase PAJ_RS09815 IPR004651 Histidine biosynthesis, HisF PAJ_RS09815 IPR006062 Histidine biosynthesis PAJ_RS09815 IPR011060 Ribulose-phosphate binding barrel PAJ_RS09815 IPR013785 Aldolase-type TIM barrel PAJ_RS09820 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain PAJ_RS09820 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase PAJ_RS09820 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like PAJ_RS09820 IPR023019 Histidine biosynthesis bifunctional protein HisIE PAJ_RS09825 IPR012893 HipA-like, C-terminal PAJ_RS09825 IPR012894 HipA, N-terminal subdomain 2 PAJ_RS09825 IPR016869 Uncharacterised conserved protein UCP028135, HipA-like PAJ_RS09830 IPR001387 Cro/C1-type helix-turn-helix domain PAJ_RS09830 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS09835 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain PAJ_RS09840 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS09840 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein PAJ_RS09840 IPR018313 Extracellular solute-binding protein, family 3, conserved site PAJ_RS09845 IPR007036 Succinylglutamate desuccinylase/aspartoacylase PAJ_RS09850 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating PAJ_RS09850 IPR006114 6-phosphogluconate dehydrogenase, C-terminal PAJ_RS09850 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding PAJ_RS09850 IPR006183 PAJ_RS09850 PAJ_RS09850 IPR006184 6-phosphogluconate-binding site PAJ_RS09850 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS09850 IPR012284 Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension PAJ_RS09850 IPR013328 Dehydrogenase, multihelical PAJ_RS09850 IPR016040 NAD(P)-binding domain PAJ_RS09860 IPR010039 Capsule biosynthesis phosphatase PAJ_RS09860 IPR023214 HAD-like domain PAJ_RS09865 IPR004119 Protein of unknown function DUF227 PAJ_RS09865 IPR011009 Protein kinase-like domain PAJ_RS09865 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS09870 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted PAJ_RS09870 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS09875 IPR000412 ABC-2 transporter PAJ_RS09875 IPR013525 ABC-2 type transporter PAJ_RS09880 IPR003439 ABC transporter-like PAJ_RS09880 IPR003593 AAA+ ATPase domain PAJ_RS09880 IPR017871 ABC transporter, conserved site PAJ_RS09880 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS09885 IPR001173 Glycosyltransferase 2-like PAJ_RS09885 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS09890 IPR011122 WavE lipopolysaccharide synthesis PAJ_RS09900 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain PAJ_RS09900 IPR005886 UDP-glucose 4-epimerase GalE PAJ_RS09900 IPR008089 Nucleotide sugar epimerase PAJ_RS09900 IPR016040 NAD(P)-binding domain PAJ_RS09905 IPR005835 Nucleotidyl transferase PAJ_RS09905 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS09915 IPR001296 Glycosyl transferase, family 1 PAJ_RS09920 IPR007345 Polysaccharide pyruvyl transferase PAJ_RS09925 IPR009093 Bacteriophage P22, Gp9, tailspike, N-terminal PAJ_RS09925 IPR011050 Pectin lyase fold/virulence factor PAJ_RS09925 IPR012334 Pectin lyase fold PAJ_RS09930 IPR001296 Glycosyl transferase, family 1 PAJ_RS09935 IPR001173 Glycosyltransferase 2-like PAJ_RS09935 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS09940 IPR001173 Glycosyltransferase 2-like PAJ_RS09940 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS09950 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PAJ_RS09950 IPR003856 Lipopolysaccharide biosynthesis PAJ_RS09950 IPR005702 Exopolysaccharide synthesis protein PAJ_RS09950 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS09950 IPR032807 PAJ_RS09950 PAJ_RS09955 IPR017867 Protein-tyrosine phosphatase, low molecular weight PAJ_RS09955 IPR023485 Phosphotyrosine protein phosphatase I superfamily PAJ_RS09960 IPR003715 Polysaccharide export protein PAJ_RS09960 IPR019554 Soluble ligand binding domain PAJ_RS09965 IPR003362 Bacterial sugar transferase PAJ_RS09965 IPR016040 NAD(P)-binding domain PAJ_RS09965 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP PAJ_RS09965 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase PAJ_RS09970 IPR000644 CBS domain PAJ_RS09970 IPR005170 Transporter-associated domain PAJ_RS09970 IPR005496 Integral membrane protein TerC PAJ_RS09970 IPR016166 FAD-binding, type 2 PAJ_RS09970 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 PAJ_RS09975 IPR007844 AsmA PAJ_RS09975 IPR032712 PAJ_RS09975 PAJ_RS09980 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase PAJ_RS09980 IPR011962 Deoxycytidine triphosphate deaminase PAJ_RS09980 IPR029054 dUTPase-like PAJ_RS09985 IPR000764 Uridine kinase like PAJ_RS09985 IPR006083 Phosphoribulokinase/uridine kinase PAJ_RS09985 IPR026008 Uridine kinase PAJ_RS09985 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS09990 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAJ_RS09995 IPR000014 PAS domain PAJ_RS09995 IPR000160 GGDEF domain PAJ_RS09995 IPR001610 PAC motif PAJ_RS09995 IPR007895 MASE1 PAJ_RS09995 IPR013655 PAS fold-3 PAJ_RS09995 IPR013767 PAS fold PAJ_RS09995 IPR029787 Nucleotide cyclase PAJ_RS10000 IPR001633 EAL domain PAJ_RS10005 IPR013126 Heat shock protein 70 family PAJ_RS10005 IPR018181 Heat shock protein 70, conserved site PAJ_RS10015 IPR006143 RND efflux pump, membrane fusion protein PAJ_RS10015 IPR022824 Multidrug resistance protein MdtA PAJ_RS10020 IPR001036 Acriflavin resistance protein PAJ_RS10020 IPR022831 Multidrug resistance protein MdtB PAJ_RS10020 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAJ_RS10025 IPR001036 Acriflavin resistance protein PAJ_RS10025 IPR023931 Multidrug resistance protein MdtC PAJ_RS10025 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAJ_RS10030 IPR004638 Drug resistance transporter EmrB/QacA subfamily PAJ_RS10030 IPR011701 Major facilitator superfamily PAJ_RS10030 IPR020846 Major facilitator superfamily domain PAJ_RS10030 IPR023721 Multidrug resistance protein MdtD, putative PAJ_RS10035 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS10035 IPR003660 HAMP linker domain PAJ_RS10035 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS10035 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS10040 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS10040 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS10040 IPR011006 CheY-like superfamily PAJ_RS10040 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS10040 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS10045 IPR001539 Peptidase U32 PAJ_RS10045 IPR032525 PAJ_RS10045 PAJ_RS10050 IPR001206 Diacylglycerol kinase, catalytic domain PAJ_RS10050 IPR005218 Diacylglycerol/lipid kinase PAJ_RS10050 IPR016064 ATP-NAD kinase-like domain PAJ_RS10050 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 PAJ_RS10050 IPR022433 Lipid kinase YegS PAJ_RS10055 IPR000669 Mannitol dehydrogenase PAJ_RS10055 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS10055 IPR013118 Mannitol dehydrogenase, C-terminal PAJ_RS10055 IPR013131 Mannitol dehydrogenase, N-terminal PAJ_RS10055 IPR013328 Dehydrogenase, multihelical PAJ_RS10055 IPR016040 NAD(P)-binding domain PAJ_RS10055 IPR023027 Mannitol dehydrogenase, conserved site PAJ_RS10060 IPR000524 Transcription regulator HTH, GntR PAJ_RS10060 IPR008920 Transcription regulator FadR/GntR, C-terminal PAJ_RS10060 IPR011711 GntR, C-terminal PAJ_RS10060 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS10065 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase PAJ_RS10065 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase PAJ_RS10065 IPR029056 Ribokinase-like PAJ_RS10070 IPR000417 Hydroxyethylthiazole kinase PAJ_RS10070 IPR029056 Ribokinase-like PAJ_RS10090 IPR004776 Auxin efflux carrier PAJ_RS10095 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II PAJ_RS10095 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site PAJ_RS10095 IPR012081 Alkyl hydroperoxide reductase subunit F PAJ_RS10095 IPR012336 Thioredoxin-like fold PAJ_RS10095 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS10100 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant PAJ_RS10100 IPR012336 Thioredoxin-like fold PAJ_RS10100 IPR017559 Alkyl hydroperoxide reductase subunit C PAJ_RS10100 IPR019479 Peroxiredoxin, C-terminal PAJ_RS10100 IPR024706 Peroxiredoxin, AhpC-type PAJ_RS10105 IPR000182 GNAT domain PAJ_RS10105 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS10110 IPR000808 Mrp, conserved site PAJ_RS10110 IPR019591 Mrp/NBP35 ATP-binding protein PAJ_RS10110 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS10115 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PAJ_RS10115 IPR002547 tRNA-binding domain PAJ_RS10115 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal PAJ_RS10115 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding PAJ_RS10115 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS10115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS10115 IPR014758 Methionyl-tRNA synthetase PAJ_RS10115 IPR015413 Methionyl/Leucyl tRNA synthetase PAJ_RS10115 IPR023458 Methionine-tRNA ligase, type 1 PAJ_RS10115 IPR029038 Methionyl-tRNA synthetase, Zn-domain PAJ_RS10120 IPR005538 LrgA/CidA family PAJ_RS10120 IPR022957 Uncharacterised protein family UPF0299 PAJ_RS10125 IPR005261 Conserved hypothetical protein CHP00659 PAJ_RS10125 IPR007300 CidB/LrgB family PAJ_RS10130 IPR002125 CMP/dCMP deaminase, zinc-binding PAJ_RS10130 IPR006263 Cytidine deaminase, homodimeric PAJ_RS10130 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain PAJ_RS10130 IPR016192 APOBEC/CMP deaminase, zinc-binding PAJ_RS10130 IPR016193 Cytidine deaminase-like PAJ_RS10130 IPR020797 Cytidine deaminase, bacteria PAJ_RS10135 IPR001891 Malic oxidoreductase PAJ_RS10135 IPR012301 Malic enzyme, N-terminal domain PAJ_RS10135 IPR012302 Malic enzyme, NAD-binding PAJ_RS10135 IPR015884 Malic enzyme, conserved site PAJ_RS10135 IPR016040 NAD(P)-binding domain PAJ_RS10135 IPR023667 NAD-dependent malic enzyme, proteobacteria PAJ_RS10140 IPR003848 Domain of unknown function DUF218 PAJ_RS10140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS10140 IPR023604 Uncharacterised protein family SanA PAJ_RS10145 IPR001851 ABC transporter, permease PAJ_RS10145 IPR030158 PAJ_RS10145 PAJ_RS10150 IPR003439 ABC transporter-like PAJ_RS10150 IPR003593 AAA+ ATPase domain PAJ_RS10150 IPR017871 ABC transporter, conserved site PAJ_RS10150 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS10160 IPR000843 Transcription regulator HTH, LacI PAJ_RS10160 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS10160 IPR028082 Periplasmic binding protein-like I PAJ_RS10165 IPR007349 Domain of unknown function DUF418 PAJ_RS10170 IPR001474 GTP cyclohydrolase I PAJ_RS10170 IPR018234 GTP cyclohydrolase I, conserved site PAJ_RS10170 IPR020602 GTP cyclohydrolase I domain PAJ_RS10175 IPR010645 Domain of unknown function DUF1228 PAJ_RS10175 IPR020846 Major facilitator superfamily domain PAJ_RS10180 IPR000847 Transcription regulator HTH, LysR PAJ_RS10180 IPR005119 LysR, substrate-binding PAJ_RS10180 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS10185 IPR002085 Alcohol dehydrogenase superfamily, zinc-type PAJ_RS10185 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PAJ_RS10185 IPR011032 GroES (chaperonin 10)-like PAJ_RS10185 IPR013149 Alcohol dehydrogenase, C-terminal PAJ_RS10185 IPR013154 Alcohol dehydrogenase GroES-like PAJ_RS10185 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase PAJ_RS10185 IPR016040 NAD(P)-binding domain PAJ_RS10185 IPR020843 Polyketide synthase, enoylreductase PAJ_RS10190 IPR000801 Putative esterase PAJ_RS10190 IPR014186 S-formylglutathione hydrolase PAJ_RS10190 IPR029058 Alpha/Beta hydrolase fold PAJ_RS10195 IPR003439 ABC transporter-like PAJ_RS10195 IPR003593 AAA+ ATPase domain PAJ_RS10195 IPR017871 ABC transporter, conserved site PAJ_RS10195 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS10200 IPR000522 ABC transporter, permease protein PAJ_RS10200 IPR029022 ABC transporter, BtuC-like PAJ_RS10205 IPR002293 Amino acid/polyamine transporter I PAJ_RS10205 IPR004840 Amino acid permease, conserved site PAJ_RS10205 IPR004841 Amino acid permease/ SLC12A domain PAJ_RS10210 IPR000847 Transcription regulator HTH, LysR PAJ_RS10210 IPR005119 LysR, substrate-binding PAJ_RS10210 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS10215 IPR010652 Protein of unknown function DUF1232 PAJ_RS10220 IPR004630 Uncharacterised protein family UPF0324, bacteria PAJ_RS10220 IPR018383 Uncharacterised protein family UPF0324, prokaryote PAJ_RS10225 IPR006842 Transposase (putative), YhgA-like PAJ_RS10225 IPR010106 Conserved hypothetical protein CHP01784 PAJ_RS10230 IPR001719 AP endonuclease 2 PAJ_RS10230 IPR013022 Xylose isomerase-like, TIM barrel domain PAJ_RS10230 IPR018246 AP endonuclease 2, zinc binding site PAJ_RS10235 IPR003352 Phosphotransferase system, EIIC PAJ_RS10235 IPR003353 Phosphotransferase system, fructose-specific IIB subunit PAJ_RS10235 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PAJ_RS10235 IPR006327 Phosphotransferase system, fructose IIC component PAJ_RS10240 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PAJ_RS10240 IPR011611 Carbohydrate kinase PfkB PAJ_RS10240 IPR017583 Tagatose/fructose phosphokinase PAJ_RS10240 IPR022463 Fructose 1-phosphate kinase PAJ_RS10240 IPR029056 Ribokinase-like PAJ_RS10245 IPR000032 Phosphocarrier HPr protein-like PAJ_RS10245 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PAJ_RS10245 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PAJ_RS10245 IPR002178 PTS EIIA type-2 domain PAJ_RS10245 IPR016152 Phosphotransferase/anion transporter PAJ_RS10250 IPR004668 Anaerobic c4-dicarboxylate membrane transporter PAJ_RS10255 IPR002220 DapA-like PAJ_RS10255 IPR013785 Aldolase-type TIM barrel PAJ_RS10260 IPR000843 Transcription regulator HTH, LacI PAJ_RS10260 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS10260 IPR028082 Periplasmic binding protein-like I PAJ_RS10265 IPR005828 General substrate transporter PAJ_RS10265 IPR005829 Sugar transporter, conserved site PAJ_RS10265 IPR020846 Major facilitator superfamily domain PAJ_RS10275 IPR001059 Translation elongation factor P/YeiP, central PAJ_RS10275 IPR008991 Translation protein SH3-like domain PAJ_RS10275 IPR011897 Translation elongation factor P-like, YeiP PAJ_RS10275 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS10275 IPR013185 Translation elongation factor, KOW-like PAJ_RS10275 IPR013852 Translation elongation factor P/YeiP, conserved site PAJ_RS10275 IPR014722 Ribosomal protein L2 domain 2 PAJ_RS10275 IPR015365 Elongation factor P, C-terminal PAJ_RS10275 IPR020599 Translation elongation factor P/YeiP PAJ_RS10280 IPR003495 CobW/HypB/UreG domain PAJ_RS10280 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS10285 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PAJ_RS10285 IPR032908 PAJ_RS10285 PAJ_RS10290 IPR000064 Endopeptidase, NLPC/P60 domain PAJ_RS10295 IPR001633 EAL domain PAJ_RS10295 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain PAJ_RS10300 IPR000914 Bacterial extracellular solute-binding protein, family 5 PAJ_RS10300 IPR030678 PAJ_RS10300 PAJ_RS10305 IPR000515 MetI-like domain PAJ_RS10310 IPR000515 MetI-like domain PAJ_RS10310 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PAJ_RS10315 IPR003439 ABC transporter-like PAJ_RS10315 IPR003593 AAA+ ATPase domain PAJ_RS10315 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PAJ_RS10315 IPR017871 ABC transporter, conserved site PAJ_RS10315 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS10320 IPR020489 Uncharacterised protein family YejG PAJ_RS10325 IPR004812 Drug resistance transporter Bcr/CmlA subfamily PAJ_RS10325 IPR011701 Major facilitator superfamily PAJ_RS10325 IPR020846 Major facilitator superfamily domain PAJ_RS10330 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F PAJ_RS10330 IPR002942 RNA-binding S4 domain PAJ_RS10330 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F PAJ_RS10330 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site PAJ_RS10330 IPR020103 Pseudouridine synthase, catalytic domain PAJ_RS10335 IPR001650 Helicase, C-terminal PAJ_RS10335 IPR006935 Helicase/UvrB domain PAJ_RS10335 IPR011332 Zinc-binding ribosomal protein PAJ_RS10335 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS10335 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS10340 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain PAJ_RS10340 IPR020055 Ribosomal protein L25, short-form PAJ_RS10340 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain PAJ_RS10340 IPR029751 Ribosomal protein L25 PAJ_RS10345 IPR007358 Nucleoid-associated protein NdpA PAJ_RS10350 IPR009857 Uncharacterised protein family UPF0352 PAJ_RS10350 IPR023202 YejL-like domain PAJ_RS10355 IPR000917 Sulfatase PAJ_RS10355 IPR012159 Membrane sulfatase, HI0842-related PAJ_RS10355 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha PAJ_RS10355 IPR017850 Alkaline-phosphatase-like, core domain PAJ_RS10355 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain PAJ_RS10370 IPR021365 Protein of unknown function DUF2891 PAJ_RS10380 IPR002510 TldD/PmbA PAJ_RS10380 IPR025502 TldD PAJ_RS10385 IPR002510 TldD/PmbA PAJ_RS10390 IPR005746 Thioredoxin PAJ_RS10390 IPR012336 Thioredoxin-like fold PAJ_RS10390 IPR013766 Thioredoxin domain PAJ_RS10390 IPR017937 Thioredoxin, conserved site PAJ_RS10395 IPR003439 ABC transporter-like PAJ_RS10395 IPR003593 AAA+ ATPase domain PAJ_RS10395 IPR011527 ABC transporter type 1, transmembrane domain PAJ_RS10395 IPR017871 ABC transporter, conserved site PAJ_RS10395 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS10400 IPR000531 TonB-dependent receptor, beta-barrel PAJ_RS10400 IPR010105 TonB-dependent siderophore receptor PAJ_RS10400 IPR012910 TonB-dependent receptor, plug PAJ_RS10405 IPR007627 RNA polymerase sigma-70 region 2 PAJ_RS10405 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS10405 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PAJ_RS10405 IPR013324 RNA polymerase sigma factor, region 3/4 PAJ_RS10405 IPR013325 RNA polymerase sigma factor, region 2 PAJ_RS10405 IPR014284 RNA polymerase sigma-70 like domain PAJ_RS10410 IPR006860 FecR protein PAJ_RS10410 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component PAJ_RS10410 IPR032623 PAJ_RS10410 PAJ_RS10415 IPR003538 Gram-negative bacterial TonB protein PAJ_RS10415 IPR006260 TonB, C-terminal PAJ_RS10420 IPR002898 MotA/TolQ/ExbB proton channel PAJ_RS10425 IPR003400 Biopolymer transport protein ExbD/TolR PAJ_RS10430 IPR010720 Alpha-L-arabinofuranosidase, C-terminal PAJ_RS10430 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS10430 IPR017853 Glycoside hydrolase, superfamily PAJ_RS10435 IPR001927 Sodium:galactoside symporter PAJ_RS10435 IPR018043 Sodium:galactoside symporter, conserved site PAJ_RS10435 IPR020846 Major facilitator superfamily domain PAJ_RS10440 IPR006685 Mechanosensitive ion channel MscS PAJ_RS10440 IPR010920 Like-Sm (LSM) domain PAJ_RS10440 IPR030192 PAJ_RS10440 PAJ_RS10450 IPR003439 ABC transporter-like PAJ_RS10450 IPR003593 AAA+ ATPase domain PAJ_RS10450 IPR005898 Cyclic peptide transporter PAJ_RS10450 IPR011527 ABC transporter type 1, transmembrane domain PAJ_RS10450 IPR017871 ABC transporter, conserved site PAJ_RS10450 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS10455 IPR004574 Alkylated DNA repair protein AlkB PAJ_RS10455 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like PAJ_RS10460 IPR003374 ApbE-like domain PAJ_RS10460 IPR024932 Flavin transferase ApbE PAJ_RS10470 IPR001702 Porin, Gram-negative type PAJ_RS10470 IPR001897 Porin, gammaproteobacterial PAJ_RS10470 IPR013793 Porin, Gram-negative type, conserved site PAJ_RS10470 IPR023614 Porin domain PAJ_RS10475 IPR003997 RTX secretion protein D, Gram-negative bacteria PAJ_RS10475 IPR006144 Secretion protein HlyD, conserved site PAJ_RS10480 IPR003439 ABC transporter-like PAJ_RS10480 IPR003593 AAA+ ATPase domain PAJ_RS10480 IPR011527 ABC transporter type 1, transmembrane domain PAJ_RS10480 IPR017750 ATPase, type I secretion system PAJ_RS10480 IPR017871 ABC transporter, conserved site PAJ_RS10480 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS10485 IPR003423 Outer membrane efflux protein PAJ_RS10485 IPR010130 Type I secretion outer membrane protein, TolC PAJ_RS10490 IPR022038 Bacterial Ig-like domain PAJ_RS10490 IPR022409 PKD/Chitinase domain PAJ_RS10500 IPR011701 Major facilitator superfamily PAJ_RS10500 IPR020846 Major facilitator superfamily domain PAJ_RS10505 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS10505 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS10505 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PAJ_RS10505 IPR030861 PAJ_RS10505 PAJ_RS10505 IPR032306 PAJ_RS10505 PAJ_RS10510 IPR000792 Transcription regulator LuxR, C-terminal PAJ_RS10510 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS10510 IPR011006 CheY-like superfamily PAJ_RS10510 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS10510 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS10510 IPR030864 PAJ_RS10510 PAJ_RS10515 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS10515 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS10515 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS10515 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS10515 IPR011006 CheY-like superfamily PAJ_RS10515 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal PAJ_RS10515 IPR030856 PAJ_RS10515 PAJ_RS10520 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal PAJ_RS10520 IPR005743 DNA gyrase, subunit A PAJ_RS10520 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel PAJ_RS10520 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain PAJ_RS10520 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta PAJ_RS10520 IPR013760 DNA topoisomerase, type IIA-like domain PAJ_RS10520 IPR024946 Arginine repressor C-terminal-like domain PAJ_RS10525 IPR010233 Ubiquinone biosynthesis O-methyltransferase PAJ_RS10525 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS10530 IPR000788 Ribonucleotide reductase large subunit, C-terminal PAJ_RS10530 IPR005144 ATP-cone PAJ_RS10530 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal PAJ_RS10530 IPR013346 Ribonucleotide reductase, class I , alpha subunit PAJ_RS10530 IPR013509 Ribonucleotide reductase large subunit, N-terminal PAJ_RS10535 IPR000358 Ribonucleotide reductase small subunit PAJ_RS10535 IPR009078 Ferritin-like superfamily PAJ_RS10535 IPR012348 Ribonucleotide reductase-related PAJ_RS10535 IPR030475 PAJ_RS10535 PAJ_RS10540 IPR001041 2Fe-2S ferredoxin-type domain PAJ_RS10540 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site PAJ_RS10540 IPR012675 Beta-grasp domain PAJ_RS10545 IPR001453 Molybdopterin binding domain PAJ_RS10545 IPR008135 Competence-induced protein CinA PAJ_RS10550 IPR010279 Protein of unknown function DUF883, ElaB PAJ_RS10555 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal PAJ_RS10555 IPR011013 Galactose mutarotase-like domain PAJ_RS10555 IPR013783 Immunoglobulin-like fold PAJ_RS10555 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D PAJ_RS10555 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup PAJ_RS10555 IPR014756 Immunoglobulin E-set PAJ_RS10560 IPR000182 GNAT domain PAJ_RS10560 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS10565 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain PAJ_RS10565 IPR029058 Alpha/Beta hydrolase fold PAJ_RS10570 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase PAJ_RS10570 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 PAJ_RS10575 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase PAJ_RS10575 IPR003918 NADH:ubiquinone oxidoreductase PAJ_RS10575 IPR010227 NADH-quinone oxidoreductase, chain M/4 PAJ_RS10580 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal PAJ_RS10580 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase PAJ_RS10580 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 PAJ_RS10580 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup PAJ_RS10585 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K PAJ_RS10590 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 PAJ_RS10595 IPR010226 NADH-quinone oxidoreductase, chain I PAJ_RS10595 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAJ_RS10595 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAJ_RS10600 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H PAJ_RS10600 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site PAJ_RS10605 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site PAJ_RS10605 IPR001041 2Fe-2S ferredoxin-type domain PAJ_RS10605 IPR006656 Molybdopterin oxidoreductase PAJ_RS10605 IPR006657 Molydopterin dinucleotide-binding domain PAJ_RS10605 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain PAJ_RS10605 IPR009010 Aspartate decarboxylase-like domain PAJ_RS10605 IPR010228 NADH:ubiquinone oxidoreductase, subunit G PAJ_RS10605 IPR012675 Beta-grasp domain PAJ_RS10605 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding PAJ_RS10610 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site PAJ_RS10610 IPR011537 NADH ubiquinone oxidoreductase, F subunit PAJ_RS10610 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit PAJ_RS10610 IPR019554 Soluble ligand binding domain PAJ_RS10610 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding PAJ_RS10615 IPR002023 NADH-quinone oxidoreductase subunit E-like PAJ_RS10615 IPR012336 Thioredoxin-like fold PAJ_RS10620 IPR001135 NADH-quinone oxidoreductase, subunit D PAJ_RS10620 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit PAJ_RS10620 IPR010218 NADH dehydrogenase, subunit C PAJ_RS10620 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site PAJ_RS10620 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H PAJ_RS10620 IPR023062 NADH dehydrogenase, subunit CD PAJ_RS10620 IPR029014 NiFe hydrogenase-like PAJ_RS10625 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit PAJ_RS10625 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit PAJ_RS10630 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 PAJ_RS10630 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid PAJ_RS10635 IPR000847 Transcription regulator HTH, LysR PAJ_RS10635 IPR005119 LysR, substrate-binding PAJ_RS10635 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS10640 IPR004839 Aminotransferase, class I/classII PAJ_RS10640 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS10640 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS10640 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS10645 IPR003607 HD/PDEase domain PAJ_RS10645 IPR006674 HD domain PAJ_RS10645 IPR022971 5'-deoxynucleotidase YfbR PAJ_RS10650 IPR006439 HAD hydrolase, subfamily IA PAJ_RS10650 IPR023198 Phosphoglycolate phosphatase, domain 2 PAJ_RS10650 IPR023214 HAD-like domain PAJ_RS10655 IPR005587 Uncharacterised protein family UPF0304, YfbU PAJ_RS10655 IPR023145 YfbU, helix-hairpin domain PAJ_RS10655 IPR023146 YfbU, alpha-helical bundle domain PAJ_RS10660 IPR007334 Uncharacterised protein family UPF0208 PAJ_RS10665 IPR000890 Aliphatic acid kinase, short-chain PAJ_RS10665 IPR004372 Acetate/Proprionate kinase PAJ_RS10665 IPR023865 Aliphatic acid kinase, short-chain, conserved site PAJ_RS10670 IPR002505 Phosphate acetyl/butaryl transferase PAJ_RS10670 IPR004614 Phosphate acetyltransferase PAJ_RS10670 IPR010766 DRTGG PAJ_RS10670 IPR016475 Phosphate acetyltransferase, bacteria PAJ_RS10670 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS10670 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like PAJ_RS10675 IPR003439 ABC transporter-like PAJ_RS10675 IPR003593 AAA+ ATPase domain PAJ_RS10675 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit PAJ_RS10675 IPR008995 Molybdate/tungstate binding, C-terminal PAJ_RS10675 IPR013611 Transport-associated OB, type 2 PAJ_RS10675 IPR017871 ABC transporter, conserved site PAJ_RS10675 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS10680 IPR000524 Transcription regulator HTH, GntR PAJ_RS10680 IPR004839 Aminotransferase, class I/classII PAJ_RS10680 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS10680 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS10680 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS10685 IPR004632 4-aminobutyrate aminotransferase, bacterial PAJ_RS10685 IPR005814 Aminotransferase class-III PAJ_RS10685 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS10685 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS10685 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS10695 IPR000515 MetI-like domain PAJ_RS10700 IPR000515 MetI-like domain PAJ_RS10705 IPR002085 Alcohol dehydrogenase superfamily, zinc-type PAJ_RS10705 IPR011032 GroES (chaperonin 10)-like PAJ_RS10705 IPR013149 Alcohol dehydrogenase, C-terminal PAJ_RS10705 IPR013154 Alcohol dehydrogenase GroES-like PAJ_RS10705 IPR016040 NAD(P)-binding domain PAJ_RS10705 IPR020843 Polyketide synthase, enoylreductase PAJ_RS10710 IPR001387 Cro/C1-type helix-turn-helix domain PAJ_RS10710 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS10715 IPR000086 NUDIX hydrolase domain PAJ_RS10715 IPR015797 NUDIX hydrolase domain-like PAJ_RS10715 IPR024195 NUDIX hydrolase, YfcD, predicted PAJ_RS10720 IPR004045 Glutathione S-transferase, N-terminal PAJ_RS10720 IPR010987 Glutathione S-transferase, C-terminal-like PAJ_RS10720 IPR012336 Thioredoxin-like fold PAJ_RS10725 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain PAJ_RS10725 IPR010099 Sugar nucleotide epimerase YfcH,-like putative PAJ_RS10725 IPR013549 Domain of unknown function DUF1731 PAJ_RS10725 IPR016040 NAD(P)-binding domain PAJ_RS10730 IPR011701 Major facilitator superfamily PAJ_RS10730 IPR020846 Major facilitator superfamily domain PAJ_RS10735 IPR000577 PAJ_RS10735 PAJ_RS10735 IPR006000 Xylulokinase PAJ_RS10735 IPR018483 Carbohydrate kinase, FGGY, conserved site PAJ_RS10735 IPR018484 Carbohydrate kinase, FGGY, N-terminal PAJ_RS10735 IPR018485 Carbohydrate kinase, FGGY, C-terminal PAJ_RS10740 IPR000669 Mannitol dehydrogenase PAJ_RS10740 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS10740 IPR013118 Mannitol dehydrogenase, C-terminal PAJ_RS10740 IPR013131 Mannitol dehydrogenase, N-terminal PAJ_RS10740 IPR013328 Dehydrogenase, multihelical PAJ_RS10740 IPR016040 NAD(P)-binding domain PAJ_RS10745 IPR007324 Sugar-binding domain, putative PAJ_RS10745 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS10750 IPR003439 ABC transporter-like PAJ_RS10750 IPR003593 AAA+ ATPase domain PAJ_RS10750 IPR017871 ABC transporter, conserved site PAJ_RS10750 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS10750 IPR030679 PAJ_RS10750 PAJ_RS10755 IPR000515 MetI-like domain PAJ_RS10755 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS10760 IPR000515 MetI-like domain PAJ_RS10760 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS10760 IPR030199 PAJ_RS10760 PAJ_RS10765 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS10765 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein PAJ_RS10765 IPR018313 Extracellular solute-binding protein, family 3, conserved site PAJ_RS10770 IPR003382 Flavoprotein PAJ_RS10770 IPR004507 Decarboxylase UbiX/Pad1 PAJ_RS10775 IPR000836 Phosphoribosyltransferase domain PAJ_RS10775 IPR005854 Amidophosphoribosyl transferase PAJ_RS10775 IPR029055 Nucleophile aminohydrolases, N-terminal PAJ_RS10775 IPR029057 Phosphoribosyltransferase-like PAJ_RS10780 IPR003825 Colicin V production, CvpA PAJ_RS10785 IPR007730 Sporulation-related domain PAJ_RS10785 IPR032898 PAJ_RS10785 PAJ_RS10790 IPR001645 Folylpolyglutamate synthetase PAJ_RS10790 IPR004101 Mur ligase, C-terminal PAJ_RS10790 IPR013221 Mur ligase, central PAJ_RS10790 IPR018109 Folylpolyglutamate synthetase, conserved site PAJ_RS10795 IPR000022 Carboxyl transferase PAJ_RS10795 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit PAJ_RS10795 IPR029045 ClpP/crotonase-like domain PAJ_RS10800 IPR032816 PAJ_RS10800 PAJ_RS10800 IPR032818 PAJ_RS10800 PAJ_RS10805 IPR001406 Pseudouridine synthase I, TruA PAJ_RS10805 IPR020094 Pseudouridine synthase I, TruA, N-terminal PAJ_RS10805 IPR020095 Pseudouridine synthase I, TruA, C-terminal PAJ_RS10805 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain PAJ_RS10805 IPR020103 Pseudouridine synthase, catalytic domain PAJ_RS10810 IPR000534 Semialdehyde dehydrogenase, NAD-binding PAJ_RS10810 IPR012080 Aspartate-semialdehyde dehydrogenase PAJ_RS10810 IPR012280 Semialdehyde dehydrogenase, dimerisation domain PAJ_RS10810 IPR016040 NAD(P)-binding domain PAJ_RS10815 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PAJ_RS10815 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PAJ_RS10815 IPR016040 NAD(P)-binding domain PAJ_RS10815 IPR020921 Erythronate-4-phosphate dehydrogenase PAJ_RS10815 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain PAJ_RS10815 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PAJ_RS10815 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PAJ_RS10820 IPR000620 Drug/metabolite transporter PAJ_RS10825 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS10825 IPR003660 HAMP linker domain PAJ_RS10825 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS10825 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS10825 IPR013727 Two-component sensor kinase N-terminal PAJ_RS10830 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS10830 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS10830 IPR011006 CheY-like superfamily PAJ_RS10830 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS10830 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS10835 IPR005064 Bordetella uptake gene PAJ_RS10840 IPR009936 Protein of unknown function DUF1468 PAJ_RS10845 IPR002823 Protein of unknown function DUF112, transmembrane PAJ_RS10855 IPR001763 Rhodanese-like domain PAJ_RS10860 IPR000524 Transcription regulator HTH, GntR PAJ_RS10860 IPR004839 Aminotransferase, class I/classII PAJ_RS10860 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS10860 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS10860 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS10865 IPR014030 Beta-ketoacyl synthase, N-terminal PAJ_RS10865 IPR014031 Beta-ketoacyl synthase, C-terminal PAJ_RS10865 IPR016039 Thiolase-like PAJ_RS10865 IPR018201 Beta-ketoacyl synthase, active site PAJ_RS10865 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PAJ_RS10870 IPR006076 FAD dependent oxidoreductase PAJ_RS10870 IPR008471 MnmC-like methyltransferase PAJ_RS10870 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal PAJ_RS10870 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC PAJ_RS10870 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS10870 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS10875 IPR014987 Uncharacterised protein family YfcL PAJ_RS10880 IPR007411 Protein of unknown function DUF462 PAJ_RS10885 IPR002781 Transmembrane protein TauE like PAJ_RS10890 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase PAJ_RS10890 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain PAJ_RS10895 IPR000453 Chorismate synthase PAJ_RS10895 IPR020541 Chorismate synthase, conserved site PAJ_RS10900 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PAJ_RS10900 IPR004556 Modification methylase HemK PAJ_RS10900 IPR007848 Methyltransferase small domain PAJ_RS10900 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase PAJ_RS10900 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS10905 IPR002625 Smr protein/MutS2 C-terminal PAJ_RS10905 IPR022990 Uncharacterised protein family UPF0115 PAJ_RS10910 IPR003660 HAMP linker domain PAJ_RS10910 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS10910 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS10910 IPR032255 PAJ_RS10910 PAJ_RS10915 IPR004449 Phosphohistidine phosphatase SixA, subgroup PAJ_RS10915 IPR013078 Histidine phosphatase superfamily, clade-1 PAJ_RS10915 IPR029033 Histidine phosphatase superfamily PAJ_RS10920 IPR001753 Crotonase superfamily PAJ_RS10920 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal PAJ_RS10920 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding PAJ_RS10920 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site PAJ_RS10920 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS10920 IPR012802 Fatty oxidation complex, alpha subunit FadJ PAJ_RS10920 IPR013328 Dehydrogenase, multihelical PAJ_RS10920 IPR016040 NAD(P)-binding domain PAJ_RS10920 IPR029045 ClpP/crotonase-like domain PAJ_RS10925 IPR002155 Thiolase PAJ_RS10925 IPR012806 Acetyl-CoA C-acyltransferase FadI PAJ_RS10925 IPR016039 Thiolase-like PAJ_RS10925 IPR020610 Thiolase, active site PAJ_RS10925 IPR020613 Thiolase, conserved site PAJ_RS10925 IPR020615 Thiolase, acyl-enzyme intermediate active site PAJ_RS10925 IPR020616 Thiolase, N-terminal PAJ_RS10925 IPR020617 Thiolase, C-terminal PAJ_RS10930 IPR005272 Conserved hypothetical protein CHP00743 PAJ_RS10935 IPR005017 Membrane protein, aromatic hydrocarbon degradation PAJ_RS10940 IPR007428 VacJ-like lipoprotein PAJ_RS10945 IPR011990 Tetratricopeptide-like helical domain PAJ_RS10945 IPR017560 Cytochrome c-type biogenesis protein CcmI PAJ_RS10945 IPR019734 Tetratricopeptide repeat PAJ_RS10950 IPR005616 Cytochrome C biogenesis protein CcmH PAJ_RS10955 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE PAJ_RS10955 IPR012336 Thioredoxin-like fold PAJ_RS10955 IPR013740 Redoxin PAJ_RS10955 IPR017937 Thioredoxin, conserved site PAJ_RS10960 IPR002541 Cytochrome c assembly protein PAJ_RS10960 IPR003567 Cytochrome c-type biogenesis protein PAJ_RS10960 IPR003568 Cytochrome c-type biogenesis protein CcmF PAJ_RS10960 IPR032523 PAJ_RS10960 PAJ_RS10965 IPR004329 CcmE/CycJ protein PAJ_RS10965 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS10970 IPR007078 Haem exporter protein D (CcmD) PAJ_RS10975 IPR002541 Cytochrome c assembly protein PAJ_RS10975 IPR003557 Cytochrome c-type biogenesis protein CcmC PAJ_RS10980 IPR003544 Cytochrome c-type biogenesis protein CcmB PAJ_RS10980 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria PAJ_RS10985 IPR003439 ABC transporter-like PAJ_RS10985 IPR003593 AAA+ ATPase domain PAJ_RS10985 IPR005895 ABC transporter, haem export, CcmA PAJ_RS10985 IPR017871 ABC transporter, conserved site PAJ_RS10985 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS10990 IPR000292 Formate/nitrite transporter PAJ_RS10990 IPR023271 Aquaporin-like PAJ_RS11000 IPR025320 Protein of unknown function DUF4225 PAJ_RS11010 IPR004129 Glycerophosphoryl diester phosphodiesterase PAJ_RS11010 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain PAJ_RS11010 IPR030395 PAJ_RS11010 PAJ_RS11015 IPR003439 ABC transporter-like PAJ_RS11015 IPR003593 AAA+ ATPase domain PAJ_RS11015 IPR008995 Molybdate/tungstate binding, C-terminal PAJ_RS11015 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS11015 IPR013611 Transport-associated OB, type 2 PAJ_RS11015 IPR017871 ABC transporter, conserved site PAJ_RS11015 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS11020 IPR000515 MetI-like domain PAJ_RS11025 IPR000515 MetI-like domain PAJ_RS11030 IPR006059 Bacterial extracellular solute-binding, family 1 PAJ_RS11035 IPR000600 ROK PAJ_RS11035 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS11045 IPR000259 Fimbrial-type adhesion domain PAJ_RS11045 IPR008966 Adhesion domain PAJ_RS11050 IPR000259 Fimbrial-type adhesion domain PAJ_RS11050 IPR005430 P pili tip fibrillum PapF protein PAJ_RS11050 IPR008966 Adhesion domain PAJ_RS11055 IPR000259 Fimbrial-type adhesion domain PAJ_RS11055 IPR008966 Adhesion domain PAJ_RS11060 IPR001829 Pili assembly chaperone, bacterial PAJ_RS11060 IPR008962 PapD-like PAJ_RS11060 IPR016147 PapD, N-terminal, bacterial PAJ_RS11060 IPR016148 Pili assembly chaperone, C-terminal domain PAJ_RS11060 IPR018046 Pili assembly chaperone, conserved site PAJ_RS11070 IPR006793 FaeA-like protein PAJ_RS11070 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS11075 IPR000259 Fimbrial-type adhesion domain PAJ_RS11075 IPR008966 Adhesion domain PAJ_RS11080 IPR000259 Fimbrial-type adhesion domain PAJ_RS11080 IPR008966 Adhesion domain PAJ_RS11085 IPR001829 Pili assembly chaperone, bacterial PAJ_RS11085 IPR008962 PapD-like PAJ_RS11085 IPR016147 PapD, N-terminal, bacterial PAJ_RS11085 IPR016148 Pili assembly chaperone, C-terminal domain PAJ_RS11085 IPR018046 Pili assembly chaperone, conserved site PAJ_RS11090 IPR000015 Outer membrane usher protein PAJ_RS11090 IPR025885 PapC, N-terminal domain PAJ_RS11090 IPR025949 PapC-like, C-terminal domain PAJ_RS11095 IPR000259 Fimbrial-type adhesion domain PAJ_RS11095 IPR008966 Adhesion domain PAJ_RS11100 IPR000259 Fimbrial-type adhesion domain PAJ_RS11100 IPR008966 Adhesion domain PAJ_RS11110 IPR014914 RES PAJ_RS11125 IPR011701 Major facilitator superfamily PAJ_RS11125 IPR020846 Major facilitator superfamily domain PAJ_RS11130 IPR005511 Senescence marker protein-30 (SMP-30) PAJ_RS11130 IPR011042 Six-bladed beta-propeller, TolB-like PAJ_RS11130 IPR013658 SMP-30/Gluconolactonase/LRE-like region PAJ_RS11145 IPR006015 Universal stress protein A PAJ_RS11145 IPR006016 UspA PAJ_RS11145 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS11150 IPR005471 Transcription regulator IclR, N-terminal PAJ_RS11150 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS11150 IPR014757 Transcription regulator IclR, C-terminal PAJ_RS11150 IPR029016 GAF domain-like PAJ_RS11155 IPR011701 Major facilitator superfamily PAJ_RS11155 IPR020846 Major facilitator superfamily domain PAJ_RS11160 IPR006143 RND efflux pump, membrane fusion protein PAJ_RS11160 IPR032317 PAJ_RS11160 PAJ_RS11165 IPR004839 Aminotransferase, class I/classII PAJ_RS11165 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS11165 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS11165 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS11170 IPR000182 GNAT domain PAJ_RS11170 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS11175 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS11175 IPR010559 Signal transduction histidine kinase, internal region PAJ_RS11175 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region PAJ_RS11175 IPR029016 GAF domain-like PAJ_RS11180 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS11180 IPR007492 LytTR DNA-binding domain PAJ_RS11180 IPR011006 CheY-like superfamily PAJ_RS11185 IPR003836 Glucokinase PAJ_RS11190 IPR000399 TPP-binding enzyme, conserved site PAJ_RS11190 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding PAJ_RS11190 IPR012000 Thiamine pyrophosphate enzyme, central domain PAJ_RS11190 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain PAJ_RS11190 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme PAJ_RS11190 IPR029035 DHS-like NAD/FAD-binding domain PAJ_RS11190 IPR029061 Thiamin diphosphate-binding fold PAJ_RS11195 IPR001395 Aldo/keto reductase PAJ_RS11195 IPR023210 NADP-dependent oxidoreductase domain PAJ_RS11200 IPR019638 Protein of unknown function DUF2502 PAJ_RS11205 IPR002935 O-methyltransferase, family 3 PAJ_RS11205 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS11210 IPR001046 NRAMP family PAJ_RS11215 IPR002668 Concentrative nucleoside transporter N-terminal domain PAJ_RS11215 IPR008276 Concentrative nucleoside transporter PAJ_RS11215 IPR011642 Nucleoside recognition Gate PAJ_RS11215 IPR011657 Concentrative nucleoside transporter C-terminal domain PAJ_RS11215 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial PAJ_RS11220 IPR002514 Transposase IS3/IS911family PAJ_RS11220 IPR009057 Homeodomain-like PAJ_RS11225 IPR001584 Integrase, catalytic core PAJ_RS11225 IPR012337 Ribonuclease H-like domain PAJ_RS11225 IPR025948 HTH-like domain PAJ_RS11230 IPR002934 Nucleotidyl transferase domain PAJ_RS11245 IPR000292 Formate/nitrite transporter PAJ_RS11245 IPR023271 Aquaporin-like PAJ_RS11245 IPR024002 Formate/nitrite transporter, conserved site PAJ_RS11250 IPR009061 DNA binding domain, putative PAJ_RS11250 IPR010749 Protein of unknown function DUF1323 PAJ_RS11250 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS11255 IPR000924 Glutamyl/glutaminyl-tRNA synthetase PAJ_RS11255 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PAJ_RS11255 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial PAJ_RS11255 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding PAJ_RS11255 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS11255 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain PAJ_RS11255 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain PAJ_RS11255 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 PAJ_RS11285 IPR025577 FlxA-like protein PAJ_RS11290 IPR000847 Transcription regulator HTH, LysR PAJ_RS11290 IPR005119 LysR, substrate-binding PAJ_RS11290 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS11295 IPR016833 Putative sodium bile acid cotransporter PAJ_RS11300 IPR024530 Protein of unknown function DUF3820 PAJ_RS11305 IPR001357 BRCT domain PAJ_RS11305 IPR001679 NAD-dependent DNA ligase PAJ_RS11305 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 PAJ_RS11305 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type PAJ_RS11305 IPR004150 NAD-dependent DNA ligase, OB-fold PAJ_RS11305 IPR010994 RuvA domain 2-like PAJ_RS11305 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS11305 IPR013839 NAD-dependent DNA ligase, adenylation PAJ_RS11305 IPR013840 NAD-dependent DNA ligase, N-terminal PAJ_RS11305 IPR018239 NAD-dependent DNA ligase, active site PAJ_RS11305 IPR033136 PAJ_RS11305 PAJ_RS11310 IPR007449 ZipA, C-terminal FtsZ-binding domain PAJ_RS11310 IPR011919 Cell division protein ZipA PAJ_RS11315 IPR022985 CysZ, gammaproteobacteria PAJ_RS11320 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site PAJ_RS11320 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAJ_RS11320 IPR005856 Cysteine synthase K/M PAJ_RS11320 IPR005859 Cysteine synthase A PAJ_RS11325 IPR000032 Phosphocarrier HPr protein-like PAJ_RS11325 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PAJ_RS11325 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PAJ_RS11330 IPR000121 PEP-utilising enzyme, C-terminal PAJ_RS11330 IPR006318 Phosphoenolpyruvate-utilising enzyme PAJ_RS11330 IPR008279 PEP-utilising enzyme, mobile domain PAJ_RS11330 IPR008731 Phosphotransferase system, enzyme I N-terminal PAJ_RS11330 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain PAJ_RS11330 IPR018274 PEP-utilising enzyme, active site PAJ_RS11330 IPR023151 PEP-utilising enzyme, conserved site PAJ_RS11330 IPR024692 Phosphotransferase system, enzyme I PAJ_RS11335 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 PAJ_RS11335 IPR011055 Duplicated hybrid motif PAJ_RS11340 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS11340 IPR003660 HAMP linker domain PAJ_RS11340 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS11340 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS11345 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS11345 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS11345 IPR011006 CheY-like superfamily PAJ_RS11345 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS11345 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS11350 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site PAJ_RS11350 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAJ_RS11350 IPR005856 Cysteine synthase K/M PAJ_RS11350 IPR005858 Cysteine synthase B PAJ_RS11355 IPR003439 ABC transporter-like PAJ_RS11355 IPR003593 AAA+ ATPase domain PAJ_RS11355 IPR005666 Sulphate transport system permease protein 1 PAJ_RS11355 IPR008995 Molybdate/tungstate binding, C-terminal PAJ_RS11355 IPR017871 ABC transporter, conserved site PAJ_RS11355 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS11360 IPR000515 MetI-like domain PAJ_RS11360 IPR005667 Sulphate ABC transporter permease protein 2 PAJ_RS11360 IPR011866 Sulphate ABC transporter, permease protein CysW PAJ_RS11365 IPR000515 MetI-like domain PAJ_RS11365 IPR005667 Sulphate ABC transporter permease protein 2 PAJ_RS11365 IPR011865 Sulphate ABC transporter, permease protein CysT PAJ_RS11370 IPR005669 Thiosulphate/Sulfate-binding protein PAJ_RS11375 IPR010938 Protein of unknown function DUF1131 PAJ_RS11380 IPR021318 Protein of unknown function DUF2919 PAJ_RS11385 IPR000182 GNAT domain PAJ_RS11385 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS11385 IPR017255 Acetyltransferase, GNAT, predicted PAJ_RS11385 IPR023072 Acetyltransferase, YpeA PAJ_RS11390 IPR002508 Cell wall hydrolase/autolysin, catalytic PAJ_RS11395 IPR001260 Coproporphyrinogen III oxidase, aerobic PAJ_RS11395 IPR018375 Coproporphyrinogen III oxidase, conserved site PAJ_RS11400 IPR002505 Phosphate acetyl/butaryl transferase PAJ_RS11400 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase PAJ_RS11400 IPR012301 Malic enzyme, N-terminal domain PAJ_RS11400 IPR012302 Malic enzyme, NAD-binding PAJ_RS11400 IPR015884 Malic enzyme, conserved site PAJ_RS11400 IPR016040 NAD(P)-binding domain PAJ_RS11405 IPR001585 Transaldolase PAJ_RS11405 IPR004730 Transaldolase type 1 PAJ_RS11405 IPR013785 Aldolase-type TIM barrel PAJ_RS11405 IPR018225 Transaldolase, active site PAJ_RS11410 IPR005474 Transketolase, N-terminal PAJ_RS11410 IPR005475 Transketolase-like, pyrimidine-binding domain PAJ_RS11410 IPR005478 Transketolase, bacterial-like PAJ_RS11410 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II PAJ_RS11410 IPR020826 Transketolase binding site PAJ_RS11410 IPR029061 Thiamin diphosphate-binding fold PAJ_RS11410 IPR033247 PAJ_RS11410 PAJ_RS11410 IPR033248 PAJ_RS11410 PAJ_RS11415 IPR004679 2-hydroxycarboxylate transporter PAJ_RS11425 IPR000014 PAS domain PAJ_RS11425 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS11425 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS11425 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS11425 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB PAJ_RS11425 IPR029151 Periplasmic sensor domain-like PAJ_RS11425 IPR033463 PAJ_RS11425 PAJ_RS11430 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS11430 IPR005471 Transcription regulator IclR, N-terminal PAJ_RS11430 IPR011006 CheY-like superfamily PAJ_RS11430 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS11430 IPR024187 Signal transduction response regulator, citrate/malate metabolism PAJ_RS11435 IPR001466 Beta-lactamase-related PAJ_RS11435 IPR012338 Beta-lactamase/transpeptidase-like PAJ_RS11450 IPR001034 HTH DeoR N-terminal domain PAJ_RS11450 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS11450 IPR014036 DeoR C-terminal sensor domain PAJ_RS11450 IPR018356 Transcription regulator, HTH DeoR-type, conserved site PAJ_RS11455 IPR025997 Periplasmic binding protein domain PAJ_RS11455 IPR028082 Periplasmic binding protein-like I PAJ_RS11460 IPR003439 ABC transporter-like PAJ_RS11460 IPR003593 AAA+ ATPase domain PAJ_RS11460 IPR017871 ABC transporter, conserved site PAJ_RS11460 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS11465 IPR001851 ABC transporter, permease PAJ_RS11470 IPR001851 ABC transporter, permease PAJ_RS11475 IPR000056 Ribulose-phosphate 3-epimerase-like PAJ_RS11475 IPR011060 Ribulose-phosphate binding barrel PAJ_RS11475 IPR013785 Aldolase-type TIM barrel PAJ_RS11480 IPR000600 ROK PAJ_RS11485 IPR002139 Ribokinase PAJ_RS11485 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PAJ_RS11485 IPR011611 Carbohydrate kinase PfkB PAJ_RS11485 IPR029056 Ribokinase-like PAJ_RS11490 IPR000086 NUDIX hydrolase domain PAJ_RS11490 IPR004385 Nucleoside diphosphate pyrophosphatase PAJ_RS11490 IPR015797 NUDIX hydrolase domain-like PAJ_RS11495 IPR002293 Amino acid/polyamine transporter I PAJ_RS11495 IPR004840 Amino acid permease, conserved site PAJ_RS11495 IPR004841 Amino acid permease/ SLC12A domain PAJ_RS11500 IPR010854 Domain of unknown function DUF1471 PAJ_RS11500 IPR025543 Dodecin-like PAJ_RS11505 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS11505 IPR003660 HAMP linker domain PAJ_RS11505 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain PAJ_RS11505 IPR029095 NarX-like, N-terminal PAJ_RS11510 IPR000792 Transcription regulator LuxR, C-terminal PAJ_RS11510 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS11510 IPR011006 CheY-like superfamily PAJ_RS11510 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS11510 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS11515 IPR001036 Acriflavin resistance protein PAJ_RS11515 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 PAJ_RS11515 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAJ_RS11520 IPR006504 Transcriptional regulator Spx/MgsR PAJ_RS11520 IPR006660 Arsenate reductase-like PAJ_RS11520 IPR012336 Thioredoxin-like fold PAJ_RS11525 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site PAJ_RS11525 IPR002933 Peptidase M20 PAJ_RS11525 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria PAJ_RS11525 IPR011650 Peptidase M20, dimerisation domain PAJ_RS11530 IPR020910 Uncharacterised protein family UPF0370 PAJ_RS11535 IPR003140 Phospholipase/carboxylesterase/thioesterase PAJ_RS11535 IPR029058 Alpha/Beta hydrolase fold PAJ_RS11540 IPR000182 GNAT domain PAJ_RS11540 IPR007807 Helicase domain PAJ_RS11540 IPR013562 Domain of unknown function DUF1726 PAJ_RS11540 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS11540 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA PAJ_RS11540 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS11540 IPR032672 PAJ_RS11540 PAJ_RS11540 IPR033442 PAJ_RS11540 PAJ_RS11545 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative PAJ_RS11550 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase PAJ_RS11550 IPR013816 ATP-grasp fold, subdomain 2 PAJ_RS11550 IPR018236 SAICAR synthetase, conserved site PAJ_RS11550 IPR028923 SAICAR synthetase/ADE2, N-terminal PAJ_RS11555 IPR010653 Lipoprotein, NlpB PAJ_RS11555 IPR014524 Outer membrane protein assembly factor BamC PAJ_RS11560 IPR002220 DapA-like PAJ_RS11560 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA PAJ_RS11560 IPR013785 Aldolase-type TIM barrel PAJ_RS11560 IPR020624 Dihydrodipicolinate synthetase, conserved site PAJ_RS11560 IPR020625 Dihydrodipicolinate synthetase, active site PAJ_RS11570 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant PAJ_RS11570 IPR012336 Thioredoxin-like fold PAJ_RS11570 IPR024706 Peroxiredoxin, AhpC-type PAJ_RS11575 IPR002549 Uncharacterised protein family UPF0118 PAJ_RS11580 IPR008928 Six-hairpin glycosidase-like PAJ_RS11580 IPR012341 Six-hairpin glycosidase PAJ_RS11580 IPR012878 Protein of unknown function DUF1680 PAJ_RS11585 IPR001927 Sodium:galactoside symporter PAJ_RS11585 IPR018043 Sodium:galactoside symporter, conserved site PAJ_RS11585 IPR020846 Major facilitator superfamily domain PAJ_RS11590 IPR003313 AraC-type arabinose-binding/dimerisation domain PAJ_RS11590 IPR009057 Homeodomain-like PAJ_RS11590 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS11590 IPR018062 HTH domain AraC-type, conserved site PAJ_RS11590 IPR020449 Transcription regulator HTH, AraC- type PAJ_RS11595 IPR000160 GGDEF domain PAJ_RS11595 IPR029151 Periplasmic sensor domain-like PAJ_RS11595 IPR029787 Nucleotide cyclase PAJ_RS11595 IPR033479 PAJ_RS11595 PAJ_RS11600 IPR004843 Calcineurin-like phosphoesterase domain, apaH type PAJ_RS11600 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA PAJ_RS11600 IPR029052 Metallo-dependent phosphatase-like PAJ_RS11605 IPR003439 ABC transporter-like PAJ_RS11605 IPR003593 AAA+ ATPase domain PAJ_RS11605 IPR008995 Molybdate/tungstate binding, C-terminal PAJ_RS11605 IPR013611 Transport-associated OB, type 2 PAJ_RS11605 IPR017871 ABC transporter, conserved site PAJ_RS11605 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS11610 IPR000515 MetI-like domain PAJ_RS11615 IPR000515 MetI-like domain PAJ_RS11625 IPR000843 Transcription regulator HTH, LacI PAJ_RS11625 IPR001761 Periplasmic binding protein/LacI sugar binding domain PAJ_RS11625 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS11625 IPR028082 Periplasmic binding protein-like I PAJ_RS11630 IPR001915 Peptidase M48 PAJ_RS11630 IPR011990 Tetratricopeptide-like helical domain PAJ_RS11630 IPR030873 PAJ_RS11630 PAJ_RS11635 IPR006659 Arsenate reductase PAJ_RS11635 IPR006660 Arsenate reductase-like PAJ_RS11635 IPR012336 Thioredoxin-like fold PAJ_RS11640 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) PAJ_RS11640 IPR017788 DnaA regulatory inactivator Hda PAJ_RS11640 IPR020591 Chromosomal replication control, initiator DnaA-like PAJ_RS11640 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae PAJ_RS11640 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS11645 IPR006042 Xanthine/uracil permease PAJ_RS11645 IPR006043 Xanthine/uracil/vitamin C permease PAJ_RS11650 IPR005765 Uracil phosphoribosyl transferase PAJ_RS11650 IPR029057 Phosphoribosyltransferase-like PAJ_RS11655 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase PAJ_RS11655 IPR010918 AIR synthase-related protein, C-terminal domain PAJ_RS11655 IPR016188 PurM, N-terminal-like PAJ_RS11660 IPR001555 Phosphoribosylglycinamide formyltransferase, active site PAJ_RS11660 IPR002376 Formyl transferase, N-terminal PAJ_RS11660 IPR004607 Phosphoribosylglycinamide formyltransferase PAJ_RS11665 IPR003439 ABC transporter-like PAJ_RS11665 IPR003593 AAA+ ATPase domain PAJ_RS11665 IPR005670 Phosphate transport system permease protein 1 PAJ_RS11665 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS11670 IPR000515 MetI-like domain PAJ_RS11670 IPR005672 Phosphate transport system permease protein PstA PAJ_RS11675 IPR000515 MetI-like domain PAJ_RS11675 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like PAJ_RS11675 IPR015943 WD40/YVTN repeat-like-containing domain PAJ_RS11680 IPR003414 Polyphosphate kinase PAJ_RS11680 IPR024953 Polyphosphate kinase middle domain PAJ_RS11680 IPR025198 Polyphosphate kinase N-terminal domain PAJ_RS11680 IPR025200 Polyphosphate kinase C-terminal domain PAJ_RS11685 IPR003695 Ppx/GppA phosphatase PAJ_RS11685 IPR022371 Exopolyphosphatase PAJ_RS11685 IPR030673 PAJ_RS11685 PAJ_RS11690 IPR004537 Tellurite resistance methyltransferase, TehB PAJ_RS11690 IPR015985 Tellurite resistance methyltransferase TehB-like domain PAJ_RS11690 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS11695 IPR022576 Protein of unknown function DUF2633 PAJ_RS11700 IPR000644 CBS domain PAJ_RS11700 IPR006667 SLC41 divalent cation transporters, integral membrane domain PAJ_RS11700 IPR006668 Magnesium transporter, MgtE intracellular domain PAJ_RS11700 IPR006669 Magnesium transporter MgtE PAJ_RS11720 IPR022224 Protein of unknown function DUF3750 PAJ_RS11730 IPR011990 Tetratricopeptide-like helical domain PAJ_RS11740 IPR000620 Drug/metabolite transporter PAJ_RS11750 IPR016195 Polymerase/histidinol phosphatase-like PAJ_RS11750 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS11770 IPR014147 Type IV conjugative transfer protein TrbJ PAJ_RS11770 IPR023220 Type IV secretion system, VirB5-domain PAJ_RS11780 IPR007688 Conjugal transfer, TrbL/VirB6 PAJ_RS11780 IPR014150 Conjugal transfer, TrbL PAJ_RS11790 IPR010522 Replication protein C, bacterial PAJ_RS11795 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS11800 IPR009061 DNA binding domain, putative PAJ_RS11800 IPR010260 Bacteriophage P4, Orf88 PAJ_RS11800 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS11805 IPR002104 Integrase, catalytic PAJ_RS11805 IPR004107 Integrase, SAM-like, N-terminal PAJ_RS11805 IPR011010 DNA breaking-rejoining enzyme, catalytic core PAJ_RS11805 IPR013762 Integrase-like, catalytic core PAJ_RS11805 IPR023109 Integrase/recombinase, N-terminal PAJ_RS11805 IPR025166 Domain of unknown function DUF4102 PAJ_RS11810 IPR001674 GMP synthase, C-terminal PAJ_RS11810 IPR004739 GMP synthase, N-terminal PAJ_RS11810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS11810 IPR017926 Glutamine amidotransferase PAJ_RS11810 IPR022310 NAD/GMP synthase PAJ_RS11810 IPR022955 GMP synthase PAJ_RS11810 IPR029062 Class I glutamine amidotransferase-like PAJ_RS11815 IPR000644 CBS domain PAJ_RS11815 IPR001093 IMP dehydrogenase/GMP reductase PAJ_RS11815 IPR005990 Inosine-5'-monophosphate dehydrogenase PAJ_RS11815 IPR013785 Aldolase-type TIM barrel PAJ_RS11815 IPR015875 IMP dehydrogenase / GMP reductase, conserved site PAJ_RS11820 IPR003753 Exonuclease VII, large subunit PAJ_RS11820 IPR020579 Exonuclease VII, large subunit, C-terminal PAJ_RS11820 IPR025824 OB-fold nucleic acid binding domain PAJ_RS11825 IPR001570 Peptidase M4, C-terminal PAJ_RS11825 IPR013856 Peptidase M4 domain PAJ_RS11825 IPR023612 Peptidase M4 PAJ_RS11825 IPR032475 PAJ_RS11825 PAJ_RS11835 IPR001479 Quinoprotein dehydrogenase, conserved site PAJ_RS11835 IPR002372 Pyrrolo-quinoline quinone repeat PAJ_RS11835 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily PAJ_RS11835 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related PAJ_RS11835 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAJ_RS11835 IPR027295 Quinonprotein alcohol dehydrogenase-like domain PAJ_RS11845 IPR005225 Small GTP-binding protein domain PAJ_RS11845 IPR006073 GTP binding domain PAJ_RS11845 IPR015946 K homology domain-like, alpha/beta PAJ_RS11845 IPR016484 GTP-binding protein EngA PAJ_RS11845 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS11845 IPR032859 PAJ_RS11845 PAJ_RS11850 IPR002372 Pyrrolo-quinoline quinone repeat PAJ_RS11850 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily PAJ_RS11850 IPR017687 Outer membrane protein assembly factor BamB PAJ_RS11850 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAJ_RS11850 IPR027295 Quinonprotein alcohol dehydrogenase-like domain PAJ_RS11855 IPR011990 Tetratricopeptide-like helical domain PAJ_RS11855 IPR018704 Domain of unknown function DUF09976 PAJ_RS11855 IPR026039 Uncharacterised protein family UPF0070 PAJ_RS11860 IPR004154 Anticodon-binding PAJ_RS11860 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit PAJ_RS11860 IPR015807 Histidine-tRNA ligase PAJ_RS11865 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type PAJ_RS11865 IPR013785 Aldolase-type TIM barrel PAJ_RS11865 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial PAJ_RS11865 IPR029065 Enolase C-terminal domain-like PAJ_RS11870 IPR001387 Cro/C1-type helix-turn-helix domain PAJ_RS11870 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS11870 IPR025194 Domain of unknown function DUF4115 PAJ_RS11875 IPR011990 Tetratricopeptide-like helical domain PAJ_RS11875 IPR013360 Pilus biogenesis/stability type IV, PilW PAJ_RS11880 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr PAJ_RS11880 IPR007197 Radical SAM PAJ_RS11880 IPR013785 Aldolase-type TIM barrel PAJ_RS11880 IPR027492 Dual-specificity RNA methyltransferase RlmN PAJ_RS11885 IPR001564 Nucleoside diphosphate kinase PAJ_RS11890 IPR001264 Glycosyl transferase, family 51 PAJ_RS11890 IPR001460 Penicillin-binding protein, transpeptidase PAJ_RS11890 IPR009647 Penicillin-binding, C-terminal PAJ_RS11890 IPR011815 Penicillin-binding protein 1C PAJ_RS11890 IPR012338 Beta-lactamase/transpeptidase-like PAJ_RS11890 IPR023346 Lysozyme-like domain PAJ_RS11895 IPR001599 Alpha-2-macroglobulin PAJ_RS11895 IPR002890 Alpha-2-macroglobulin, N-terminal PAJ_RS11895 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid PAJ_RS11895 IPR011625 Alpha-2-macroglobulin, N-terminal 2 PAJ_RS11895 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming PAJ_RS11895 IPR021868 Alpha-2-macroglobulin MG1 domain PAJ_RS11895 IPR026284 Alpha-2-macroglobulin domain protein, bacteria PAJ_RS11905 IPR009839 SseB protein N-terminal domain PAJ_RS11905 IPR027945 SseB protein, C-terminal PAJ_RS11910 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal PAJ_RS11910 IPR008330 Peptidase M17, peptidase B PAJ_RS11910 IPR011356 Leucine aminopeptidase/peptidase B PAJ_RS11915 IPR000192 Aminotransferase class V domain PAJ_RS11915 IPR010240 Cysteine desulfurase PAJ_RS11915 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS11915 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS11915 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS11915 IPR016454 Cysteine desulfurase, NifS PAJ_RS11915 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site PAJ_RS11920 IPR000944 Transcription regulator Rrf2-like PAJ_RS11920 IPR010242 Transcription factor HTH, IscR PAJ_RS11920 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS11920 IPR030489 PAJ_RS11920 PAJ_RS11925 IPR001537 tRNA/rRNA methyltransferase, SpoU type PAJ_RS11925 IPR004384 RNA methyltransferase TrmH, group 1 PAJ_RS11925 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PAJ_RS11925 IPR029028 Alpha/beta knot methyltransferases PAJ_RS11930 IPR000760 Inositol monophosphatase PAJ_RS11930 IPR020550 Inositol monophosphatase, conserved site PAJ_RS11930 IPR020583 Inositol monophosphatase, metal-binding site PAJ_RS11930 IPR022337 Inositol monophosphatase, SuhB PAJ_RS11940 IPR011541 Nickel/cobalt transporter, high-affinity PAJ_RS11945 IPR010412 Protein of unknown function DUF1007 PAJ_RS11945 IPR016537 Uncharacterised conserved protein UCP008159, PAJ_RS11950 IPR011608 PRD domain PAJ_RS11955 IPR020846 Major facilitator superfamily domain PAJ_RS11955 IPR024989 Major facilitator superfamily associated domain PAJ_RS11955 IPR026032 Phenylproprionate/maltose permease PAJ_RS11960 IPR001085 Serine hydroxymethyltransferase PAJ_RS11960 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS11960 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS11960 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS11960 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site PAJ_RS11965 IPR000971 Globin PAJ_RS11965 IPR001221 Phenol hydroxylase reductase PAJ_RS11965 IPR001433 Oxidoreductase FAD/NAD(P)-binding PAJ_RS11965 IPR008333 Oxidoreductase, FAD-binding domain PAJ_RS11965 IPR009050 Globin-like PAJ_RS11965 IPR012292 Globin, structural domain PAJ_RS11965 IPR017938 Riboflavin synthase-like beta-barrel PAJ_RS11965 IPR023950 Flavohemoprotein PAJ_RS11970 IPR002187 Nitrogen regulatory protein PII PAJ_RS11970 IPR002332 Nitrogen regulatory protein P-II, urydylation site PAJ_RS11970 IPR011322 Nitrogen regulatory PII-like, alpha/beta PAJ_RS11970 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PAJ_RS11970 IPR017918 Nitrogen regulatory protein PII, conserved site PAJ_RS11975 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS11975 IPR002078 RNA polymerase sigma factor 54 interaction domain PAJ_RS11975 IPR003593 AAA+ ATPase domain PAJ_RS11975 IPR009057 Homeodomain-like PAJ_RS11975 IPR011006 CheY-like superfamily PAJ_RS11975 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAJ_RS11975 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAJ_RS11975 IPR025944 Sigma-54 interaction domain, conserved site PAJ_RS11975 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS11980 IPR025262 Quorum-sensing regulator protein G PAJ_RS11985 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS11985 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS11985 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS11990 IPR010073 Phosphoribosylformylglycinamidine synthase PAJ_RS11990 IPR010918 AIR synthase-related protein, C-terminal domain PAJ_RS11990 IPR016188 PurM, N-terminal-like PAJ_RS11990 IPR029062 Class I glutamine amidotransferase-like PAJ_RS11995 IPR000189 Prokaryotic transglycosylase, active site PAJ_RS11995 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS11995 IPR008258 Lytic transglycosylase-like SLT domain PAJ_RS11995 IPR023346 Lysozyme-like domain PAJ_RS11995 IPR023703 Membrane-bound lytic murein transglycosylase F PAJ_RS12005 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB PAJ_RS12005 IPR023214 HAD-like domain PAJ_RS12010 IPR000281 Helix-turn-helix protein RpiR PAJ_RS12010 IPR001347 Sugar isomerase (SIS) PAJ_RS12010 IPR009057 Homeodomain-like PAJ_RS12010 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS12015 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PAJ_RS12015 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAJ_RS12020 IPR002582 Holo-[acyl carrier protein] synthase PAJ_RS12020 IPR004568 Phosphopantethiene-protein transferase domain PAJ_RS12020 IPR008278 4'-phosphopantetheinyl transferase superfamily PAJ_RS12025 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ PAJ_RS12025 IPR013785 Aldolase-type TIM barrel PAJ_RS12030 IPR003717 Recombination protein O, RecO PAJ_RS12030 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS12030 IPR022572 DNA replication/recombination mediator RecO, N-terminal PAJ_RS12035 IPR004044 K Homology domain, type 2 PAJ_RS12035 IPR005225 Small GTP-binding protein domain PAJ_RS12035 IPR005662 GTP-binding protein Era PAJ_RS12035 IPR006073 GTP binding domain PAJ_RS12035 IPR009019 K homology domain, prokaryotic type PAJ_RS12035 IPR015946 K homology domain-like, alpha/beta PAJ_RS12035 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12040 IPR000999 Ribonuclease III domain PAJ_RS12040 IPR011907 Ribonuclease III PAJ_RS12040 IPR014720 Double-stranded RNA-binding domain PAJ_RS12045 IPR000223 Peptidase S26A, signal peptidase I PAJ_RS12045 IPR015927 Peptidase S24/S26A/S26B/S26C PAJ_RS12045 IPR019533 Peptidase S26 PAJ_RS12045 IPR019756 Peptidase S26A, signal peptidase I, serine active site PAJ_RS12045 IPR019757 Peptidase S26A, signal peptidase I, lysine active site PAJ_RS12045 IPR019758 Peptidase S26A, signal peptidase I, conserved site PAJ_RS12045 IPR019759 Peptidase S24/S26A/S26B PAJ_RS12045 IPR019766 Peptidase S26A, all-beta subdomain PAJ_RS12045 IPR028360 Peptidase S24/S26, beta-ribbon domain PAJ_RS12050 IPR000640 Translation elongation factor EFG, V domain PAJ_RS12050 IPR000795 Elongation factor, GTP-binding domain PAJ_RS12050 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 PAJ_RS12050 IPR005225 Small GTP-binding protein domain PAJ_RS12050 IPR006297 Elongation factor 4 PAJ_RS12050 IPR009022 Elongation factor G, III-V domain PAJ_RS12050 IPR013842 GTP-binding protein LepA, C-terminal PAJ_RS12050 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12050 IPR031157 PAJ_RS12050 PAJ_RS12055 IPR007359 Positive regulator of sigma(E), RseC/MucC PAJ_RS12055 IPR026268 Protein RseC PAJ_RS12060 IPR005588 MucB/RseB PAJ_RS12060 IPR033434 PAJ_RS12060 PAJ_RS12060 IPR033436 PAJ_RS12060 PAJ_RS12065 IPR005572 Anti sigma-E protein RseA, N-terminal PAJ_RS12065 IPR005573 Anti sigma-E protein RseA, C-terminal PAJ_RS12065 IPR026279 Sigma-E factor negative regulatory protein RseA PAJ_RS12070 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site PAJ_RS12070 IPR007627 RNA polymerase sigma-70 region 2 PAJ_RS12070 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS12070 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 PAJ_RS12070 IPR013324 RNA polymerase sigma factor, region 3/4 PAJ_RS12070 IPR013325 RNA polymerase sigma factor, region 2 PAJ_RS12070 IPR014284 RNA polymerase sigma-70 like domain PAJ_RS12070 IPR014286 RNA polymerase sigma-70 RpoE type PAJ_RS12075 IPR003953 FAD binding domain PAJ_RS12075 IPR005288 L-aspartate oxidase PAJ_RS12075 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal PAJ_RS12075 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS12075 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain PAJ_RS12080 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PAJ_RS12080 IPR007848 Methyltransferase small domain PAJ_RS12080 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase PAJ_RS12080 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS12085 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site PAJ_RS12085 IPR001650 Helicase, C-terminal PAJ_RS12085 IPR011545 DEAD/DEAH box helicase domain PAJ_RS12085 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS12085 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12085 IPR028621 ATP-dependent RNA helicase SrmB PAJ_RS12090 IPR001150 Glycine radical domain PAJ_RS12090 IPR011140 Autonomous glycyl radical cofactor GrcA PAJ_RS12090 IPR019777 Formate C-acetyltransferase glycine radical, conserved site PAJ_RS12095 IPR002043 Uracil-DNA glycosylase PAJ_RS12095 IPR005122 Uracil-DNA glycosylase-like PAJ_RS12100 IPR000740 GrpE nucleotide exchange factor PAJ_RS12100 IPR009012 GrpE nucleotide exchange factor, head PAJ_RS12100 IPR013805 GrpE nucleotide exchange factor, coiled-coil PAJ_RS12105 IPR002504 Inorganic polyphosphate/ATP-NAD kinase PAJ_RS12105 IPR016064 ATP-NAD kinase-like domain PAJ_RS12105 IPR017437 ATP-NAD kinase, PpnK-type, all-beta PAJ_RS12105 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 PAJ_RS12110 IPR003395 RecF/RecN/SMC, N-terminal PAJ_RS12110 IPR004604 DNA recombination/repair protein RecN PAJ_RS12110 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12115 IPR007450 Lipoprotein SmpA/OmlA PAJ_RS12115 IPR026592 Outer membrane protein assembly factor BamE PAJ_RS12120 IPR005346 RnfH protein PAJ_RS12120 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PAJ_RS12125 IPR005031 Streptomyces cyclase/dehydrase PAJ_RS12125 IPR023393 START-like domain PAJ_RS12130 IPR000037 SsrA-binding protein PAJ_RS12130 IPR020081 SsrA-binding protein, conserved site PAJ_RS12130 IPR023620 Small protein B PAJ_RS12140 IPR002104 Integrase, catalytic PAJ_RS12140 IPR011010 DNA breaking-rejoining enzyme, catalytic core PAJ_RS12140 IPR013762 Integrase-like, catalytic core PAJ_RS12140 IPR023109 Integrase/recombinase, N-terminal PAJ_RS12140 IPR025166 Domain of unknown function DUF4102 PAJ_RS12145 IPR014914 RES PAJ_RS12160 IPR021602 Protein of unknown function DUF3223 PAJ_RS12170 IPR002514 Transposase IS3/IS911family PAJ_RS12170 IPR009057 Homeodomain-like PAJ_RS12175 IPR001584 Integrase, catalytic core PAJ_RS12175 IPR012337 Ribonuclease H-like domain PAJ_RS12175 IPR025948 HTH-like domain PAJ_RS12200 IPR032466 PAJ_RS12200 PAJ_RS12215 IPR004914 Antirestriction protein PAJ_RS12230 IPR009610 Protein of unknown function DUF1219 PAJ_RS12235 IPR001647 DNA-binding HTH domain, TetR-type PAJ_RS12235 IPR009057 Homeodomain-like PAJ_RS12235 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAJ_RS12235 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal PAJ_RS12240 IPR000073 Alpha/beta hydrolase fold-1 PAJ_RS12240 IPR000639 Epoxide hydrolase-like PAJ_RS12240 IPR029058 Alpha/Beta hydrolase fold PAJ_RS12245 IPR000531 TonB-dependent receptor, beta-barrel PAJ_RS12245 IPR012910 TonB-dependent receptor, plug PAJ_RS12250 IPR002491 ABC transporter periplasmic binding domain PAJ_RS12255 IPR000522 ABC transporter, permease protein PAJ_RS12255 IPR029022 ABC transporter, BtuC-like PAJ_RS12260 IPR000522 ABC transporter, permease protein PAJ_RS12260 IPR029022 ABC transporter, BtuC-like PAJ_RS12265 IPR003439 ABC transporter-like PAJ_RS12265 IPR003593 AAA+ ATPase domain PAJ_RS12265 IPR017871 ABC transporter, conserved site PAJ_RS12265 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12270 IPR005471 Transcription regulator IclR, N-terminal PAJ_RS12270 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS12270 IPR014757 Transcription regulator IclR, C-terminal PAJ_RS12270 IPR029016 GAF domain-like PAJ_RS12275 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase PAJ_RS12280 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PAJ_RS12280 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PAJ_RS12280 IPR016040 NAD(P)-binding domain PAJ_RS12280 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PAJ_RS12285 IPR005511 Senescence marker protein-30 (SMP-30) PAJ_RS12285 IPR011042 Six-bladed beta-propeller, TolB-like PAJ_RS12285 IPR013658 SMP-30/Gluconolactonase/LRE-like region PAJ_RS12290 IPR011701 Major facilitator superfamily PAJ_RS12290 IPR020846 Major facilitator superfamily domain PAJ_RS12295 IPR011701 Major facilitator superfamily PAJ_RS12295 IPR020846 Major facilitator superfamily domain PAJ_RS12305 IPR001550 Transcription antiterminator, conserved site PAJ_RS12305 IPR004341 CAT RNA-binding domain PAJ_RS12305 IPR011608 PRD domain PAJ_RS12310 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PAJ_RS12310 IPR029045 ClpP/crotonase-like domain PAJ_RS12315 IPR002085 Alcohol dehydrogenase superfamily, zinc-type PAJ_RS12315 IPR011032 GroES (chaperonin 10)-like PAJ_RS12315 IPR013149 Alcohol dehydrogenase, C-terminal PAJ_RS12315 IPR013154 Alcohol dehydrogenase GroES-like PAJ_RS12315 IPR016040 NAD(P)-binding domain PAJ_RS12315 IPR020843 Polyketide synthase, enoylreductase PAJ_RS12320 IPR002577 Helix-turn-helix, HxlR type PAJ_RS12320 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS12325 IPR006626 Parallel beta-helix repeat PAJ_RS12325 IPR011050 Pectin lyase fold/virulence factor PAJ_RS12330 IPR003680 Flavodoxin-like fold PAJ_RS12330 IPR029039 Flavoprotein-like PAJ_RS12335 IPR000847 Transcription regulator HTH, LysR PAJ_RS12335 IPR005119 LysR, substrate-binding PAJ_RS12335 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS12340 IPR002078 RNA polymerase sigma factor 54 interaction domain PAJ_RS12340 IPR002197 DNA binding HTH domain, Fis-type PAJ_RS12340 IPR003593 AAA+ ATPase domain PAJ_RS12340 IPR009057 Homeodomain-like PAJ_RS12340 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal PAJ_RS12340 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12345 IPR006680 Amidohydrolase 1 PAJ_RS12345 IPR011059 Metal-dependent hydrolase, composite domain PAJ_RS12345 IPR032466 PAJ_RS12345 PAJ_RS12350 IPR001898 Sodium/sulphate symporter PAJ_RS12350 IPR030676 PAJ_RS12350 PAJ_RS12355 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase PAJ_RS12360 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PAJ_RS12360 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PAJ_RS12360 IPR016040 NAD(P)-binding domain PAJ_RS12360 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PAJ_RS12365 IPR001702 Porin, Gram-negative type PAJ_RS12365 IPR001897 Porin, gammaproteobacterial PAJ_RS12365 IPR023614 Porin domain PAJ_RS12370 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V PAJ_RS12370 IPR011057 Mss4-like PAJ_RS12375 IPR001036 Acriflavin resistance protein PAJ_RS12375 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 PAJ_RS12375 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAJ_RS12385 IPR000182 GNAT domain PAJ_RS12385 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS12390 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS12390 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS12390 IPR011006 CheY-like superfamily PAJ_RS12390 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS12390 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS12395 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS12395 IPR003660 HAMP linker domain PAJ_RS12395 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS12395 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS12400 IPR013816 ATP-grasp fold, subdomain 2 PAJ_RS12400 IPR029465 TupA-like ATPgrasp protein PAJ_RS12410 IPR002491 ABC transporter periplasmic binding domain PAJ_RS12415 IPR000522 ABC transporter, permease protein PAJ_RS12415 IPR029022 ABC transporter, BtuC-like PAJ_RS12420 IPR003439 ABC transporter-like PAJ_RS12420 IPR003593 AAA+ ATPase domain PAJ_RS12420 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12425 IPR006793 FaeA-like protein PAJ_RS12425 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS12435 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS12435 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS12435 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS12440 IPR001757 Cation-transporting P-type ATPase PAJ_RS12440 IPR004014 Cation-transporting P-type ATPase, N-terminal PAJ_RS12440 IPR006068 Cation-transporting P-type ATPase, C-terminal PAJ_RS12440 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB PAJ_RS12440 IPR008250 P-type ATPase, A domain PAJ_RS12440 IPR018303 P-type ATPase, phosphorylation site PAJ_RS12440 IPR023214 HAD-like domain PAJ_RS12440 IPR023298 P-type ATPase, transmembrane domain PAJ_RS12440 IPR023299 P-type ATPase, cytoplasmic domain N PAJ_RS12445 IPR000914 Bacterial extracellular solute-binding protein, family 5 PAJ_RS12445 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site PAJ_RS12445 IPR030678 PAJ_RS12445 PAJ_RS12450 IPR000515 MetI-like domain PAJ_RS12455 IPR000515 MetI-like domain PAJ_RS12455 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PAJ_RS12460 IPR003439 ABC transporter-like PAJ_RS12460 IPR003593 AAA+ ATPase domain PAJ_RS12460 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12465 IPR003439 ABC transporter-like PAJ_RS12465 IPR003593 AAA+ ATPase domain PAJ_RS12465 IPR017871 ABC transporter, conserved site PAJ_RS12465 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12470 IPR000182 GNAT domain PAJ_RS12470 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS12480 IPR003726 Homocysteine S-methyltransferase PAJ_RS12485 IPR002293 Amino acid/polyamine transporter I PAJ_RS12485 IPR004840 Amino acid permease, conserved site PAJ_RS12485 IPR004841 Amino acid permease/ SLC12A domain PAJ_RS12490 IPR018994 Protein of unknown function DUF2002 PAJ_RS12495 IPR010279 Protein of unknown function DUF883, ElaB PAJ_RS12500 IPR002109 Glutaredoxin PAJ_RS12500 IPR011909 Glutaredoxin-like protein NrdH PAJ_RS12500 IPR012336 Thioredoxin-like fold PAJ_RS12505 IPR004465 Ribonucleotide reductase Class Ib, NrdI PAJ_RS12505 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial PAJ_RS12505 IPR029039 Flavoprotein-like PAJ_RS12510 IPR000788 Ribonucleotide reductase large subunit, C-terminal PAJ_RS12510 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal PAJ_RS12510 IPR013346 Ribonucleotide reductase, class I , alpha subunit PAJ_RS12510 IPR013509 Ribonucleotide reductase large subunit, N-terminal PAJ_RS12510 IPR013554 Ribonucleotide reductase N-terminal PAJ_RS12510 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE PAJ_RS12515 IPR000358 Ribonucleotide reductase small subunit PAJ_RS12515 IPR009078 Ferritin-like superfamily PAJ_RS12515 IPR012348 Ribonucleotide reductase-related PAJ_RS12515 IPR026494 Ribonucleoside reductase subunit beta, NrdF PAJ_RS12515 IPR030475 PAJ_RS12515 PAJ_RS12520 IPR000644 CBS domain PAJ_RS12520 IPR003439 ABC transporter-like PAJ_RS12520 IPR003593 AAA+ ATPase domain PAJ_RS12520 IPR005892 Glycine betaine transport ATP-binding subunit PAJ_RS12520 IPR017871 ABC transporter, conserved site PAJ_RS12520 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12525 IPR000515 MetI-like domain PAJ_RS12530 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain PAJ_RS12535 IPR011701 Major facilitator superfamily PAJ_RS12535 IPR020846 Major facilitator superfamily domain PAJ_RS12540 IPR000835 MarR-type HTH domain PAJ_RS12540 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS12540 IPR023187 Transcriptional regulator MarR-type, conserved site PAJ_RS12545 IPR005694 Efflux pump membrane protein Emr PAJ_RS12545 IPR006143 RND efflux pump, membrane fusion protein PAJ_RS12545 IPR032317 PAJ_RS12545 PAJ_RS12555 IPR002085 Alcohol dehydrogenase superfamily, zinc-type PAJ_RS12555 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PAJ_RS12555 IPR011032 GroES (chaperonin 10)-like PAJ_RS12555 IPR013149 Alcohol dehydrogenase, C-terminal PAJ_RS12555 IPR013154 Alcohol dehydrogenase GroES-like PAJ_RS12555 IPR016040 NAD(P)-binding domain PAJ_RS12555 IPR020843 Polyketide synthase, enoylreductase PAJ_RS12555 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PAJ_RS12560 IPR002577 Helix-turn-helix, HxlR type PAJ_RS12560 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS12565 IPR001537 tRNA/rRNA methyltransferase, SpoU type PAJ_RS12565 IPR013123 RNA 2-O ribose methyltransferase, substrate binding PAJ_RS12565 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted PAJ_RS12565 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PAJ_RS12565 IPR029028 Alpha/beta knot methyltransferases PAJ_RS12565 IPR029064 50S ribosomal protein L30e-like PAJ_RS12570 IPR005746 Thioredoxin PAJ_RS12570 IPR012336 Thioredoxin-like fold PAJ_RS12570 IPR013766 Thioredoxin domain PAJ_RS12570 IPR017937 Thioredoxin, conserved site PAJ_RS12575 IPR005636 DTW PAJ_RS12580 IPR000182 GNAT domain PAJ_RS12580 IPR003781 CoA-binding PAJ_RS12580 IPR013816 ATP-grasp fold, subdomain 2 PAJ_RS12580 IPR016040 NAD(P)-binding domain PAJ_RS12580 IPR016102 Succinyl-CoA synthetase-like PAJ_RS12580 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS12580 IPR032875 PAJ_RS12580 PAJ_RS12585 IPR001736 Phospholipase D/Transphosphatidylase PAJ_RS12585 IPR016270 Phospholipase D, phosphatidylserine synthase type PAJ_RS12585 IPR025202 Phospholipase D-like domain PAJ_RS12590 IPR004736 Citrate-proton symport PAJ_RS12590 IPR005828 General substrate transporter PAJ_RS12590 IPR005829 Sugar transporter, conserved site PAJ_RS12590 IPR020846 Major facilitator superfamily domain PAJ_RS12595 IPR002085 Alcohol dehydrogenase superfamily, zinc-type PAJ_RS12595 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PAJ_RS12595 IPR011032 GroES (chaperonin 10)-like PAJ_RS12595 IPR013149 Alcohol dehydrogenase, C-terminal PAJ_RS12595 IPR013154 Alcohol dehydrogenase GroES-like PAJ_RS12595 IPR016040 NAD(P)-binding domain PAJ_RS12595 IPR020843 Polyketide synthase, enoylreductase PAJ_RS12600 IPR000485 AsnC-type HTH domain PAJ_RS12600 IPR011008 Dimeric alpha-beta barrel PAJ_RS12600 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS12600 IPR019887 Transcription regulator AsnC-type, C-terminal PAJ_RS12600 IPR019888 Transcription regulator AsnC-type PAJ_RS12630 IPR001270 ClpA/B family PAJ_RS12630 IPR003593 AAA+ ATPase domain PAJ_RS12630 IPR003959 ATPase, AAA-type, core PAJ_RS12630 IPR004176 Clp, N-terminal PAJ_RS12630 IPR017730 Chaperonin ClpB PAJ_RS12630 IPR018368 ClpA/B, conserved site 1 PAJ_RS12630 IPR019489 Clp ATPase, C-terminal PAJ_RS12630 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12630 IPR028299 ClpA/B, conserved site 2 PAJ_RS12635 IPR003730 Multi-copper polyphenol oxidoreductase, laccase PAJ_RS12635 IPR011324 Cytotoxic necrotizing factor-like, catalytic PAJ_RS12640 IPR002942 RNA-binding S4 domain PAJ_RS12640 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F PAJ_RS12640 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PAJ_RS12640 IPR006225 Pseudouridine synthase, RluC/RluD PAJ_RS12640 IPR020103 Pseudouridine synthase, catalytic domain PAJ_RS12645 IPR011990 Tetratricopeptide-like helical domain PAJ_RS12645 IPR017689 Outer membrane protein assembly factor BamD PAJ_RS12650 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein PAJ_RS12655 IPR001086 Prephenate dehydratase PAJ_RS12655 IPR002701 Chorismate mutase PAJ_RS12655 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase PAJ_RS12655 IPR010952 Chorismate mutase, gammaproteobacteria PAJ_RS12655 IPR018528 Prephenate dehydratase, conserved site PAJ_RS12655 IPR020822 Chorismate mutase, type II PAJ_RS12660 IPR002701 Chorismate mutase PAJ_RS12660 IPR003099 Prephenate dehydrogenase PAJ_RS12660 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein PAJ_RS12660 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS12660 IPR011277 Chorismate mutase, T-protein PAJ_RS12660 IPR016040 NAD(P)-binding domain PAJ_RS12660 IPR020822 Chorismate mutase, type II PAJ_RS12665 IPR006218 DAHP synthetase I/KDSA PAJ_RS12665 IPR006219 DHAP synthase, class 1 PAJ_RS12665 IPR013785 Aldolase-type TIM barrel PAJ_RS12670 IPR000182 GNAT domain PAJ_RS12670 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS12680 IPR001857 Ribosomal protein L19 PAJ_RS12680 IPR008991 Translation protein SH3-like domain PAJ_RS12680 IPR018257 Ribosomal protein L19, conserved site PAJ_RS12685 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria PAJ_RS12685 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain PAJ_RS12685 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal PAJ_RS12685 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PAJ_RS12685 IPR029028 Alpha/beta knot methyltransferases PAJ_RS12690 IPR002676 RimM protein PAJ_RS12690 IPR009000 Translation protein, beta-barrel domain PAJ_RS12690 IPR011033 PRC-barrel-like PAJ_RS12690 IPR011961 16S rRNA processing protein RimM PAJ_RS12690 IPR027275 PRC-barrel domain PAJ_RS12695 IPR000307 Ribosomal protein S16 PAJ_RS12695 IPR020592 Ribosomal protein S16, conserved site PAJ_RS12695 IPR023803 Ribosomal protein S16 domain PAJ_RS12700 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain PAJ_RS12700 IPR003593 AAA+ ATPase domain PAJ_RS12700 IPR004125 Signal recognition particle, SRP54 subunit, M-domain PAJ_RS12700 IPR004780 Signal recognition particle protein Ffh PAJ_RS12700 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle PAJ_RS12700 IPR022941 Signal recognition particle, SRP54 subunit PAJ_RS12700 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12705 IPR002541 Cytochrome c assembly protein PAJ_RS12710 IPR000644 CBS domain PAJ_RS12710 IPR002550 Domain of unknown function DUF21 PAJ_RS12710 IPR005170 Transporter-associated domain PAJ_RS12710 IPR016166 FAD-binding, type 2 PAJ_RS12710 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 PAJ_RS12715 IPR003815 S-ribosylhomocysteinase (LuxS) PAJ_RS12715 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like PAJ_RS12720 IPR006334 Glutamate--cysteine ligase, monofunctional PAJ_RS12720 IPR007370 Glutamate--cysteine ligase PAJ_RS12725 IPR020143 Uncharacterised protein family, RP436 PAJ_RS12725 IPR032818 PAJ_RS12725 PAJ_RS12730 IPR006439 HAD hydrolase, subfamily IA PAJ_RS12730 IPR010976 Beta-phosphoglucomutase hydrolase PAJ_RS12730 IPR023198 Phosphoglycolate phosphatase, domain 2 PAJ_RS12730 IPR023214 HAD-like domain PAJ_RS12760 IPR003751 Carbon storage regulator PAJ_RS12765 IPR002318 Alanine-tRNA ligase, class IIc PAJ_RS12765 IPR003156 DHHA1 domain PAJ_RS12765 IPR009000 Translation protein, beta-barrel domain PAJ_RS12765 IPR012947 Threonyl/alanyl tRNA synthetase, SAD PAJ_RS12765 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain PAJ_RS12765 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain PAJ_RS12765 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal PAJ_RS12765 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria PAJ_RS12770 IPR003783 Regulatory protein RecX PAJ_RS12770 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS12775 IPR003593 AAA+ ATPase domain PAJ_RS12775 IPR013765 DNA recombination and repair protein RecA PAJ_RS12775 IPR020584 DNA recombination/repair protein RecA, conserved site PAJ_RS12775 IPR023400 DNA recombination and repair protein RecA, C-terminal PAJ_RS12775 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12780 IPR008136 CinA, C-terminal PAJ_RS12785 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal PAJ_RS12785 IPR023506 Trans-aconitate 2-methyltransferase PAJ_RS12785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS12790 IPR004624 PhnA protein PAJ_RS12790 IPR013987 PhnA protein, N-terminal PAJ_RS12790 IPR013988 PhnA protein, C-terminal PAJ_RS12795 IPR011757 Lytic transglycosylase MltB PAJ_RS12795 IPR023346 Lysozyme-like domain PAJ_RS12795 IPR031304 PAJ_RS12795 PAJ_RS12800 IPR000432 DNA mismatch repair protein MutS, C-terminal PAJ_RS12800 IPR005748 DNA mismatch repair protein MutS, type 1 PAJ_RS12800 IPR007695 DNA mismatch repair protein MutS-like, N-terminal PAJ_RS12800 IPR007696 DNA mismatch repair protein MutS, core PAJ_RS12800 IPR007860 DNA mismatch repair protein MutS, connector domain PAJ_RS12800 IPR007861 DNA mismatch repair protein MutS, clamp PAJ_RS12800 IPR016151 DNA mismatch repair protein MutS, N-terminal PAJ_RS12800 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12805 IPR001387 Cro/C1-type helix-turn-helix domain PAJ_RS12805 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS12805 IPR025698 2TM domain PAJ_RS12810 IPR005238 ComB-like PAJ_RS12815 IPR000943 RNA polymerase sigma-70 PAJ_RS12815 IPR007624 RNA polymerase sigma-70 region 3 PAJ_RS12815 IPR007627 RNA polymerase sigma-70 region 2 PAJ_RS12815 IPR007630 RNA polymerase sigma-70 region 4 PAJ_RS12815 IPR009042 RNA polymerase sigma-70 region 1.2 PAJ_RS12815 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS12815 IPR012761 RNA polymerase sigma factor RpoS PAJ_RS12815 IPR013324 RNA polymerase sigma factor, region 3/4 PAJ_RS12815 IPR013325 RNA polymerase sigma factor, region 2 PAJ_RS12815 IPR014284 RNA polymerase sigma-70 like domain PAJ_RS12820 IPR011055 Duplicated hybrid motif PAJ_RS12820 IPR016047 Peptidase M23 PAJ_RS12820 IPR018392 LysM domain PAJ_RS12825 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase PAJ_RS12825 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS12830 IPR002828 Survival protein SurE-like phosphatase/nucleotidase PAJ_RS12830 IPR030048 PAJ_RS12830 PAJ_RS12835 IPR001656 Pseudouridine synthase, TruD PAJ_RS12835 IPR020103 Pseudouridine synthase, catalytic domain PAJ_RS12835 IPR020119 Pseudouridine synthase TruD, conserved site PAJ_RS12840 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase PAJ_RS12840 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site PAJ_RS12845 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PAJ_RS12845 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site PAJ_RS12845 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS12850 IPR007060 Septum formation initiator FtsL/DivIC PAJ_RS12850 IPR023081 Cell division protein FtsB PAJ_RS12855 IPR022721 Protein of unknown function DUF3561 PAJ_RS12860 IPR002891 Adenylylsulphate kinase PAJ_RS12860 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12865 IPR000795 Elongation factor, GTP-binding domain PAJ_RS12865 IPR005225 Small GTP-binding protein domain PAJ_RS12865 IPR009000 Translation protein, beta-barrel domain PAJ_RS12865 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PAJ_RS12865 IPR011779 Sulphate adenylyltransferase, large subunit PAJ_RS12865 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12865 IPR031157 PAJ_RS12865 PAJ_RS12870 IPR002500 Phosphoadenosine phosphosulphate reductase PAJ_RS12870 IPR011784 Sulphate adenylyltransferase, small subunit PAJ_RS12870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS12875 IPR000878 Tetrapyrrole methylase PAJ_RS12875 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site PAJ_RS12875 IPR006366 Uroporphyrin-III C-methyltransferase PAJ_RS12875 IPR006367 Sirohaem synthase, N-terminal PAJ_RS12875 IPR012409 Sirohaem synthase PAJ_RS12875 IPR014776 Tetrapyrrole methylase, subdomain 2 PAJ_RS12875 IPR014777 Tetrapyrrole methylase, subdomain 1 PAJ_RS12875 IPR016040 NAD(P)-binding domain PAJ_RS12875 IPR019478 Sirohaem synthase, dimerisation domain PAJ_RS12875 IPR028281 Siroheme synthase, central domain PAJ_RS12880 IPR007484 Peptidase M28 PAJ_RS12885 IPR005545 YCII-related PAJ_RS12885 IPR011008 Dimeric alpha-beta barrel PAJ_RS12890 IPR005471 Transcription regulator IclR, N-terminal PAJ_RS12890 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS12890 IPR014757 Transcription regulator IclR, C-terminal PAJ_RS12890 IPR029016 GAF domain-like PAJ_RS12895 IPR006175 YjgF/Yer057p/UK114 family PAJ_RS12895 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAJ_RS12900 IPR001320 Ionotropic glutamate receptor PAJ_RS12900 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS12900 IPR018313 Extracellular solute-binding protein, family 3, conserved site PAJ_RS12905 IPR000515 MetI-like domain PAJ_RS12905 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS12910 IPR000515 MetI-like domain PAJ_RS12910 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS12915 IPR003439 ABC transporter-like PAJ_RS12915 IPR003593 AAA+ ATPase domain PAJ_RS12915 IPR017871 ABC transporter, conserved site PAJ_RS12915 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12915 IPR030679 PAJ_RS12915 PAJ_RS12920 IPR001608 Alanine racemase, N-terminal PAJ_RS12920 IPR026956 D-serine dehydratase-like domain PAJ_RS12920 IPR029066 PLP-binding barrel PAJ_RS12925 IPR002500 Phosphoadenosine phosphosulphate reductase PAJ_RS12925 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase PAJ_RS12925 IPR011800 Phosphoadenosine phosphosulphate reductase CysH PAJ_RS12925 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS12930 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain PAJ_RS12930 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site PAJ_RS12930 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain PAJ_RS12930 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit PAJ_RS12935 IPR001094 Flavodoxin PAJ_RS12935 IPR001433 Oxidoreductase FAD/NAD(P)-binding PAJ_RS12935 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PAJ_RS12935 IPR003097 FAD-binding, type 1 PAJ_RS12935 IPR008254 Flavodoxin/nitric oxide synthase PAJ_RS12935 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain PAJ_RS12935 IPR017938 Riboflavin synthase-like beta-barrel PAJ_RS12935 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 PAJ_RS12935 IPR029039 Flavoprotein-like PAJ_RS12935 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria PAJ_RS12940 IPR001447 Arylamine N-acetyltransferase PAJ_RS12945 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein PAJ_RS12950 IPR008162 Inorganic pyrophosphatase PAJ_RS12955 IPR013785 Aldolase-type TIM barrel PAJ_RS12955 IPR024924 7-carboxy-7-deazaguanine synthase-like PAJ_RS12955 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria PAJ_RS12960 IPR011642 Nucleoside recognition Gate PAJ_RS12965 IPR002933 Peptidase M20 PAJ_RS12965 IPR011650 Peptidase M20, dimerisation domain PAJ_RS12970 IPR005135 Endonuclease/exonuclease/phosphatase PAJ_RS12975 IPR000941 Enolase PAJ_RS12975 IPR020809 Enolase, conserved site PAJ_RS12975 IPR020810 Enolase, C-terminal PAJ_RS12975 IPR020811 Enolase, N-terminal PAJ_RS12975 IPR029017 Enolase N-terminal domain-like PAJ_RS12975 IPR029065 Enolase C-terminal domain-like PAJ_RS12980 IPR004468 CTP synthase PAJ_RS12980 IPR017456 CTP synthase, N-terminal PAJ_RS12980 IPR017926 Glutamine amidotransferase PAJ_RS12980 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS12980 IPR029062 Class I glutamine amidotransferase-like PAJ_RS12985 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PAJ_RS12985 IPR011551 NTP pyrophosphohydrolase MazG, bacterial PAJ_RS12990 IPR002912 ACT domain PAJ_RS12990 IPR003607 HD/PDEase domain PAJ_RS12990 IPR004095 TGS PAJ_RS12990 IPR004811 RelA/SpoT family PAJ_RS12990 IPR007685 RelA/SpoT PAJ_RS12990 IPR012675 Beta-grasp domain PAJ_RS12990 IPR012676 TGS-like PAJ_RS12995 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD PAJ_RS12995 IPR002792 TRAM domain PAJ_RS12995 IPR010280 (Uracil-5)-methyltransferase family PAJ_RS12995 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS12995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS12995 IPR030390 PAJ_RS12995 PAJ_RS12995 IPR030391 PAJ_RS12995 PAJ_RS13000 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS13000 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS13000 IPR003660 HAMP linker domain PAJ_RS13000 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS13000 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS13000 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PAJ_RS13000 IPR011006 CheY-like superfamily PAJ_RS13000 IPR019247 Histidine kinase BarA, N-terminal PAJ_RS13005 IPR004381 Glycerate kinase PAJ_RS13005 IPR018193 Glycerate kinase, flavodoxin-like domain PAJ_RS13010 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site PAJ_RS13010 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding PAJ_RS13010 IPR006398 2-hydroxy-3-oxopropionate reductase PAJ_RS13010 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS13010 IPR013328 Dehydrogenase, multihelical PAJ_RS13010 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type PAJ_RS13010 IPR016040 NAD(P)-binding domain PAJ_RS13010 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain PAJ_RS13015 IPR005000 HpcH/HpaI aldolase/citrate lyase domain PAJ_RS13015 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain PAJ_RS13015 IPR017648 2-dehydro-3-deoxyglucarate aldolase, GarL PAJ_RS13020 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase PAJ_RS13020 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PAJ_RS13020 IPR017653 Glucarate dehydratase PAJ_RS13020 IPR029017 Enolase N-terminal domain-like PAJ_RS13020 IPR029065 Enolase C-terminal domain-like PAJ_RS13030 IPR000849 Sugar phosphate transporter PAJ_RS13030 IPR004744 D-galactonate transporter PAJ_RS13030 IPR011701 Major facilitator superfamily PAJ_RS13030 IPR020846 Major facilitator superfamily domain PAJ_RS13035 IPR007392 D-galactarate dehydratase/Altronate hydrolase, C-terminal PAJ_RS13035 IPR013974 SAF domain PAJ_RS13035 IPR017654 Galactarate dehydratase PAJ_RS13035 IPR032893 PAJ_RS13035 PAJ_RS13040 IPR001094 Flavodoxin PAJ_RS13040 IPR008254 Flavodoxin/nitric oxide synthase PAJ_RS13040 IPR029039 Flavoprotein-like PAJ_RS13045 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F PAJ_RS13045 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site PAJ_RS13045 IPR020103 Pseudouridine synthase, catalytic domain PAJ_RS13050 IPR007384 Protein of unknown function UCP006257 PAJ_RS13050 IPR023376 YqcC-like domain PAJ_RS13055 IPR009948 Syd PAJ_RS13060 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 PAJ_RS13060 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal PAJ_RS13060 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF PAJ_RS13065 IPR021826 Protein of unknown function DUF3412 PAJ_RS13065 IPR027820 Domain of unknown function DUF4478 PAJ_RS13065 IPR031100 PAJ_RS13065 PAJ_RS13070 IPR002421 5'-3' exonuclease, N-terminal PAJ_RS13070 IPR008918 Helix-hairpin-helix motif, class 2 PAJ_RS13070 IPR020045 5'-3' exonuclease, C-terminal domain PAJ_RS13070 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal PAJ_RS13070 IPR022895 Flap endonuclease Xni PAJ_RS13070 IPR029060 PIN domain-like PAJ_RS13075 IPR002877 Ribosomal RNA methyltransferase FtsJ domain PAJ_RS13075 IPR011224 Ribosomal RNA large subunit methyltransferase M PAJ_RS13075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS13080 IPR006696 Protein of unknown function DUF423 PAJ_RS13085 IPR000847 Transcription regulator HTH, LysR PAJ_RS13085 IPR005119 LysR, substrate-binding PAJ_RS13085 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS13090 IPR010305 Protein of unknown function DUF903 PAJ_RS13090 IPR010920 Like-Sm (LSM) domain PAJ_RS13095 IPR000192 Aminotransferase class V domain PAJ_RS13095 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS13095 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS13095 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS13095 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site PAJ_RS13095 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA PAJ_RS13100 IPR003808 Fe-S metabolism associated domain, SufE-like PAJ_RS13100 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE PAJ_RS13105 IPR000594 UBA/THIF-type NAD/FAD binding fold PAJ_RS13105 IPR016040 NAD(P)-binding domain PAJ_RS13110 IPR005300 Lytic transglycosylase MltA PAJ_RS13110 IPR009009 RlpA-like double-psi beta-barrel domain PAJ_RS13110 IPR010611 3D domain PAJ_RS13110 IPR026044 Membrane-bound lytic murein transglycosylase A PAJ_RS13130 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site PAJ_RS13130 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAJ_RS13130 IPR011780 D-serine ammonia-lyase PAJ_RS13140 IPR000182 GNAT domain PAJ_RS13140 IPR001048 Aspartate/glutamate/uridylate kinase PAJ_RS13140 IPR010167 Amino-acid N-acetyltransferase (ArgA) PAJ_RS13140 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS13145 IPR003593 AAA+ ATPase domain PAJ_RS13145 IPR006344 Exodeoxyribonuclease V, alpha subunit PAJ_RS13145 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS13145 IPR027785 UvrD-like helicase C-terminal domain PAJ_RS13150 IPR000212 DNA helicase, UvrD/REP type PAJ_RS13150 IPR004586 Exodeoxyribonuclease V, beta subunit PAJ_RS13150 IPR011335 Restriction endonuclease type II-like PAJ_RS13150 IPR011604 Exonuclease, phage-type/RecB, C-terminal PAJ_RS13150 IPR014016 UvrD-like Helicase, ATP-binding domain PAJ_RS13150 IPR014017 DNA helicase, UvrD-like, C-terminal PAJ_RS13150 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS13155 IPR001431 Peptidase M16, zinc-binding site PAJ_RS13155 IPR007863 Peptidase M16, C-terminal domain PAJ_RS13155 IPR011237 Peptidase M16 domain PAJ_RS13155 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like PAJ_RS13155 IPR011765 Peptidase M16, N-terminal PAJ_RS13155 IPR032632 PAJ_RS13155 PAJ_RS13160 IPR006697 Exodeoxyribonuclease V, gamma subunit PAJ_RS13160 IPR011335 Restriction endonuclease type II-like PAJ_RS13160 IPR013986 DExx box DNA helicase domain PAJ_RS13160 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS13165 IPR022204 Prepilin peptidase dependent protein C PAJ_RS13170 IPR019652 Protein of unknown function DUF2509 PAJ_RS13175 IPR012902 Prokaryotic N-terminal methylation site PAJ_RS13175 IPR016419 Prepilin peptidase-dependent protein B, predicted PAJ_RS13180 IPR012902 Prokaryotic N-terminal methylation site PAJ_RS13185 IPR000398 Thymidylate synthase PAJ_RS13185 IPR020940 Thymidylate synthase, active site PAJ_RS13185 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain PAJ_RS13190 IPR001640 Prolipoprotein diacylglyceryl transferase PAJ_RS13195 IPR000121 PEP-utilising enzyme, C-terminal PAJ_RS13195 IPR003018 GAF domain PAJ_RS13195 IPR006318 Phosphoenolpyruvate-utilising enzyme PAJ_RS13195 IPR008279 PEP-utilising enzyme, mobile domain PAJ_RS13195 IPR008731 Phosphotransferase system, enzyme I N-terminal PAJ_RS13195 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain PAJ_RS13195 IPR018274 PEP-utilising enzyme, active site PAJ_RS13195 IPR023151 PEP-utilising enzyme, conserved site PAJ_RS13195 IPR029016 GAF domain-like PAJ_RS13200 IPR000086 NUDIX hydrolase domain PAJ_RS13200 IPR015797 NUDIX hydrolase domain-like PAJ_RS13200 IPR020084 NUDIX hydrolase, conserved site PAJ_RS13200 IPR020476 NUDIX hydrolase PAJ_RS13200 IPR022927 RNA pyrophosphohydrolase RppH PAJ_RS13205 IPR004230 DNA mismatch repair protein MutH PAJ_RS13205 IPR011335 Restriction endonuclease type II-like PAJ_RS13205 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II PAJ_RS13210 IPR005496 Integral membrane protein TerC PAJ_RS13215 IPR010305 Protein of unknown function DUF903 PAJ_RS13215 IPR010920 Like-Sm (LSM) domain PAJ_RS13220 IPR001395 Aldo/keto reductase PAJ_RS13220 IPR023210 NADP-dependent oxidoreductase domain PAJ_RS13225 IPR000183 Ornithine/DAP/Arg decarboxylase PAJ_RS13225 IPR002986 Diaminopimelate decarboxylase, LysA PAJ_RS13225 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal PAJ_RS13225 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal PAJ_RS13225 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal PAJ_RS13225 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site PAJ_RS13225 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site PAJ_RS13225 IPR029066 PLP-binding barrel PAJ_RS13230 IPR000847 Transcription regulator HTH, LysR PAJ_RS13230 IPR005119 LysR, substrate-binding PAJ_RS13230 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS13235 IPR011701 Major facilitator superfamily PAJ_RS13235 IPR020846 Major facilitator superfamily domain PAJ_RS13240 IPR009003 Trypsin-like cysteine/serine peptidase domain PAJ_RS13245 IPR011051 RmlC-like cupin domain PAJ_RS13245 IPR013096 Cupin 2, conserved barrel PAJ_RS13245 IPR014710 RmlC-like jelly roll fold PAJ_RS13250 IPR002313 Lysine-tRNA ligase, class II PAJ_RS13250 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) PAJ_RS13250 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type PAJ_RS13250 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS13250 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal PAJ_RS13250 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like PAJ_RS13255 IPR001667 DDH domain PAJ_RS13255 IPR003156 DHHA1 domain PAJ_RS13255 IPR004610 Bacterial RecJ exonuclease PAJ_RS13260 IPR009094 Disulphide bond isomerase, DsbC, N-terminal PAJ_RS13260 IPR012336 Thioredoxin-like fold PAJ_RS13260 IPR017937 Thioredoxin, conserved site PAJ_RS13260 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PAJ_RS13265 IPR002104 Integrase, catalytic PAJ_RS13265 IPR004107 Integrase, SAM-like, N-terminal PAJ_RS13265 IPR011010 DNA breaking-rejoining enzyme, catalytic core PAJ_RS13265 IPR011932 Tyrosine recombinase XerD PAJ_RS13265 IPR013762 Integrase-like, catalytic core PAJ_RS13265 IPR023009 Tyrosine recombinase XerC/XerD PAJ_RS13265 IPR023109 Integrase/recombinase, N-terminal PAJ_RS13270 IPR001226 Flavodoxin, conserved site PAJ_RS13270 IPR008254 Flavodoxin/nitric oxide synthase PAJ_RS13270 IPR010086 Flavodoxin, long chain PAJ_RS13270 IPR029039 Flavoprotein-like PAJ_RS13275 IPR009883 Protein of unknown function DUF1434 PAJ_RS13280 IPR005631 Flavinator of succinate dehydrogenase PAJ_RS13285 IPR006222 Glycine cleavage T-protein, N-terminal PAJ_RS13285 IPR017703 YgfZ/GcvT conserved site PAJ_RS13285 IPR023758 tRNA-modifying protein YgfZ PAJ_RS13285 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain PAJ_RS13290 IPR004254 Hly-III-related PAJ_RS13290 IPR005744 HylII PAJ_RS13295 IPR000281 Helix-turn-helix protein RpiR PAJ_RS13295 IPR001347 Sugar isomerase (SIS) PAJ_RS13295 IPR009057 Homeodomain-like PAJ_RS13295 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS13300 IPR001360 Glycoside hydrolase, family 1 PAJ_RS13300 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS13300 IPR017853 Glycoside hydrolase, superfamily PAJ_RS13300 IPR018120 Glycoside hydrolase, family 1, active site PAJ_RS13300 IPR033132 PAJ_RS13300 PAJ_RS13305 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS13305 IPR016040 NAD(P)-binding domain PAJ_RS13305 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS13310 IPR003437 Glycine cleavage system P protein, homodimeric PAJ_RS13310 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS13310 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS13310 IPR020580 Glycine cleavage system P-protein, N-terminal PAJ_RS13310 IPR020581 Glycine cleavage system P protein PAJ_RS13315 IPR002930 Glycine cleavage system H-protein PAJ_RS13315 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site PAJ_RS13315 IPR011053 Single hybrid motif PAJ_RS13315 IPR017453 Glycine cleavage system H-protein, subgroup PAJ_RS13320 IPR006222 Glycine cleavage T-protein, N-terminal PAJ_RS13320 IPR006223 Glycine cleavage system T protein PAJ_RS13320 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain PAJ_RS13320 IPR022903 Glycine cleavage system T protein, bacteria PAJ_RS13320 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 PAJ_RS13320 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA PAJ_RS13320 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain PAJ_RS13325 IPR002938 Monooxygenase, FAD-binding PAJ_RS13325 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 PAJ_RS13325 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site PAJ_RS13325 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS13330 IPR002938 Monooxygenase, FAD-binding PAJ_RS13330 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 PAJ_RS13330 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase PAJ_RS13330 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site PAJ_RS13330 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS13335 IPR000994 Peptidase M24, structural domain PAJ_RS13335 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site PAJ_RS13335 IPR001714 Peptidase M24, methionine aminopeptidase PAJ_RS13335 IPR007865 Aminopeptidase P, N-terminal PAJ_RS13335 IPR028980 Creatinase/Aminopeptidase P, N-terminal PAJ_RS13335 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PAJ_RS13340 IPR011978 Uncharacterised protein family UPF0149 PAJ_RS13345 IPR007838 Cell division protein ZapA-like PAJ_RS13345 IPR023771 Cell division protein ZapA, eubacteria PAJ_RS13355 IPR002698 5-formyltetrahydrofolate cyclo-ligase PAJ_RS13355 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain PAJ_RS13360 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PAJ_RS13360 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PAJ_RS13360 IPR016040 NAD(P)-binding domain PAJ_RS13360 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 PAJ_RS13360 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PAJ_RS13360 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PAJ_RS13365 IPR004788 Ribose 5-phosphate isomerase, type A PAJ_RS13365 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup PAJ_RS13370 IPR000847 Transcription regulator HTH, LysR PAJ_RS13370 IPR005119 LysR, substrate-binding PAJ_RS13370 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS13370 IPR017685 Transcription regulator ArgP PAJ_RS13370 IPR023490 Chromosome initiation inhibitor PAJ_RS13375 IPR007497 Protein of unknown function DUF541 PAJ_RS13380 IPR001123 Lysine-type exporter protein (LYSE/YGGA) PAJ_RS13380 IPR004777 L-lysine exporter/arginine exporter PAJ_RS13380 IPR023445 Arginine exporter protein ArgO, enterobacteria PAJ_RS13385 IPR006685 Mechanosensitive ion channel MscS PAJ_RS13385 IPR006686 Mechanosensitive ion channel MscS, conserved site PAJ_RS13385 IPR008910 Conserved TM helix PAJ_RS13385 IPR010920 Like-Sm (LSM) domain PAJ_RS13385 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 PAJ_RS13385 IPR011066 Mechanosensitive ion channel MscS, C-terminal PAJ_RS13395 IPR000771 Ketose-bisphosphate aldolase, class-II PAJ_RS13395 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype PAJ_RS13395 IPR013785 Aldolase-type TIM barrel PAJ_RS13400 IPR001576 Phosphoglycerate kinase PAJ_RS13400 IPR015824 Phosphoglycerate kinase, N-terminal PAJ_RS13400 IPR015901 Phosphoglycerate kinase, C-terminal PAJ_RS13400 IPR015911 Phosphoglycerate kinase, conserved site PAJ_RS13405 IPR006422 D-erythrose-4-phosphate dehydrogenase PAJ_RS13405 IPR016040 NAD(P)-binding domain PAJ_RS13405 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain PAJ_RS13405 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain PAJ_RS13405 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site PAJ_RS13405 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family PAJ_RS13410 IPR005474 Transketolase, N-terminal PAJ_RS13410 IPR005475 Transketolase-like, pyrimidine-binding domain PAJ_RS13410 IPR005478 Transketolase, bacterial-like PAJ_RS13410 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II PAJ_RS13410 IPR020826 Transketolase binding site PAJ_RS13410 IPR029061 Thiamin diphosphate-binding fold PAJ_RS13410 IPR033247 PAJ_RS13410 PAJ_RS13410 IPR033248 PAJ_RS13410 PAJ_RS13415 IPR001915 Peptidase M48 PAJ_RS13420 IPR005925 Agmatinase-related PAJ_RS13420 IPR006035 Ureohydrolase PAJ_RS13420 IPR020855 Ureohydrolase, manganese-binding site PAJ_RS13420 IPR023694 Agmatinase PAJ_RS13420 IPR023696 Ureohydrolase domain PAJ_RS13425 IPR000183 Ornithine/DAP/Arg decarboxylase PAJ_RS13425 IPR002985 Arginine decarboxylase PAJ_RS13425 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal PAJ_RS13425 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal PAJ_RS13425 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal PAJ_RS13425 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site PAJ_RS13425 IPR029066 PLP-binding barrel PAJ_RS13430 IPR002133 S-adenosylmethionine synthetase PAJ_RS13430 IPR022628 S-adenosylmethionine synthetase, N-terminal PAJ_RS13430 IPR022629 S-adenosylmethionine synthetase, central domain PAJ_RS13430 IPR022630 S-adenosylmethionine synthetase, C-terminal PAJ_RS13430 IPR022631 S-adenosylmethionine synthetase, conserved site PAJ_RS13430 IPR022636 S-adenosylmethionine synthetase superfamily PAJ_RS13435 IPR003663 Sugar/inositol transporter PAJ_RS13435 IPR005828 General substrate transporter PAJ_RS13435 IPR005829 Sugar transporter, conserved site PAJ_RS13435 IPR020846 Major facilitator superfamily domain PAJ_RS13440 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS13440 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS13440 IPR033479 PAJ_RS13440 PAJ_RS13445 IPR006640 Domain of unknown function SprT-like PAJ_RS13445 IPR023483 Uncharacterised protein family SprT PAJ_RS13450 IPR007346 Endonuclease I PAJ_RS13455 IPR006700 Ribosomal RNA small subunit methyltransferase E PAJ_RS13455 IPR015947 PUA-like domain PAJ_RS13455 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PAJ_RS13455 IPR029028 Alpha/beta knot methyltransferases PAJ_RS13460 IPR004215 Prokaryotic glutathione synthetase, N-terminal PAJ_RS13460 IPR004218 Prokaryotic glutathione synthetase, ATP-binding PAJ_RS13460 IPR006284 Glutathione synthetase, prokaryotic PAJ_RS13460 IPR013815 ATP-grasp fold, subdomain 1 PAJ_RS13460 IPR013816 ATP-grasp fold, subdomain 2 PAJ_RS13460 IPR016185 Pre-ATP-grasp domain PAJ_RS13465 IPR003774 Protein of unknown function UPF0301 PAJ_RS13470 IPR005227 Resolvase, holliday junction-type, YqgF-like PAJ_RS13470 IPR006641 YqgF/RNase H-like domain PAJ_RS13470 IPR012337 Ribonuclease H-like domain PAJ_RS13475 IPR001482 Type II secretion system protein E PAJ_RS13475 IPR006321 Pilus retraction protein PilT PAJ_RS13475 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS13480 IPR001608 Alanine racemase, N-terminal PAJ_RS13480 IPR011078 Uncharacterised protein family UPF0001 PAJ_RS13480 IPR029066 PLP-binding barrel PAJ_RS13485 IPR003425 Uncharacterised protein family Ycf19 PAJ_RS13490 IPR002637 Ham1-like protein PAJ_RS13490 IPR020922 Non-canonical purine NTP pyrophosphatase PAJ_RS13490 IPR029001 Inosine triphosphate pyrophosphatase-like PAJ_RS13495 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related PAJ_RS13495 IPR006638 Elongator protein 3/MiaB/NifB PAJ_RS13495 IPR007197 Radical SAM PAJ_RS13495 IPR010723 HemN, C-terminal domain PAJ_RS13495 IPR023404 Radical SAM, alpha/beta horseshoe PAJ_RS13500 IPR000524 Transcription regulator HTH, GntR PAJ_RS13500 IPR011663 UbiC transcription regulator-associated PAJ_RS13500 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS13500 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAJ_RS13505 IPR002178 PTS EIIA type-2 domain PAJ_RS13505 IPR016152 Phosphotransferase/anion transporter PAJ_RS13510 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PAJ_RS13515 IPR004703 Phosphotransferase system, sugar-specific permease component PAJ_RS13520 IPR021307 Protein of unknown function DUF2884 PAJ_RS13525 IPR007416 Protein of unknown function DUF469 PAJ_RS13530 IPR003358 tRNA (guanine-N-7) methyltransferase PAJ_RS13530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS13535 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain PAJ_RS13535 IPR009057 Homeodomain-like PAJ_RS13535 IPR011051 RmlC-like cupin domain PAJ_RS13535 IPR014710 RmlC-like jelly roll fold PAJ_RS13535 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS13535 IPR018062 HTH domain AraC-type, conserved site PAJ_RS13535 IPR020449 Transcription regulator HTH, AraC- type PAJ_RS13540 IPR001088 Glycoside hydrolase, family 4 PAJ_RS13540 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal PAJ_RS13540 IPR016040 NAD(P)-binding domain PAJ_RS13540 IPR019802 Glycoside hydrolase, family 4, conserved site PAJ_RS13540 IPR022616 Glycosyl hydrolase, family 4, C-terminal PAJ_RS13545 IPR001927 Sodium:galactoside symporter PAJ_RS13545 IPR020846 Major facilitator superfamily domain PAJ_RS13550 IPR000445 Helix-hairpin-helix motif PAJ_RS13550 IPR003265 HhH-GPD domain PAJ_RS13550 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif PAJ_RS13550 IPR004035 Endonuclease III, iron-sulphur binding site PAJ_RS13550 IPR004036 Endonuclease III-like, conserved site-2 PAJ_RS13550 IPR005760 A/G-specific adenine glycosylase MutY PAJ_RS13550 IPR011257 DNA glycosylase PAJ_RS13550 IPR015797 NUDIX hydrolase domain-like PAJ_RS13550 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal PAJ_RS13550 IPR029119 MutY, C-terminal PAJ_RS13555 IPR007457 Fe(II) trafficking protein YggX PAJ_RS13560 IPR000189 Prokaryotic transglycosylase, active site PAJ_RS13560 IPR008258 Lytic transglycosylase-like SLT domain PAJ_RS13560 IPR023346 Lysozyme-like domain PAJ_RS13560 IPR024570 Murein transglycosylase-C, N-terminal PAJ_RS13570 IPR000310 Orn/Lys/Arg decarboxylase, major domain PAJ_RS13570 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal PAJ_RS13570 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal PAJ_RS13570 IPR011006 CheY-like superfamily PAJ_RS13570 IPR011193 Ornithine/lysine/arginine decarboxylase PAJ_RS13570 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS13570 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS13570 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS13570 IPR027464 Ornithine decarboxylase, N-terminal domain PAJ_RS13575 IPR002085 Alcohol dehydrogenase superfamily, zinc-type PAJ_RS13575 IPR011032 GroES (chaperonin 10)-like PAJ_RS13575 IPR013149 Alcohol dehydrogenase, C-terminal PAJ_RS13575 IPR014188 Acrylyl-CoA reductase AcuI PAJ_RS13575 IPR016040 NAD(P)-binding domain PAJ_RS13575 IPR020843 Polyketide synthase, enoylreductase PAJ_RS13580 IPR011893 Selenoprotein, Rdx type PAJ_RS13580 IPR012336 Thioredoxin-like fold PAJ_RS13585 IPR005149 Transcription regulator PadR N-terminal PAJ_RS13585 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS13590 IPR007037 Siderophore-interacting protein PAJ_RS13590 IPR013113 FAD-binding 9, siderophore-interacting PAJ_RS13590 IPR017938 Riboflavin synthase-like beta-barrel PAJ_RS13600 IPR009057 Homeodomain-like PAJ_RS13600 IPR011256 Regulatory factor, effector binding domain PAJ_RS13600 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS13600 IPR020449 Transcription regulator HTH, AraC- type PAJ_RS13610 IPR002585 Cytochrome d ubiquinol oxidase, subunit I PAJ_RS13615 IPR002577 Helix-turn-helix, HxlR type PAJ_RS13615 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS13620 IPR016040 NAD(P)-binding domain PAJ_RS13625 IPR007138 Antibiotic biosynthesis monooxygenase-like domain PAJ_RS13625 IPR011008 Dimeric alpha-beta barrel PAJ_RS13635 IPR001845 HTH ArsR-type DNA-binding domain PAJ_RS13635 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS13640 IPR000182 GNAT domain PAJ_RS13640 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS13645 IPR001661 Glycoside hydrolase, family 37 PAJ_RS13645 IPR008928 Six-hairpin glycosidase-like PAJ_RS13645 IPR018232 Glycoside hydrolase, family 37, conserved site PAJ_RS13645 IPR023715 Trehalase, cytoplasmic PAJ_RS13650 IPR009078 Ferritin-like superfamily PAJ_RS13650 IPR010287 Domain of unknown function DUF892 PAJ_RS13650 IPR012347 Ferritin-related PAJ_RS13655 IPR009078 Ferritin-like superfamily PAJ_RS13655 IPR010287 Domain of unknown function DUF892 PAJ_RS13655 IPR012347 Ferritin-related PAJ_RS13660 IPR019626 Stress-induced protein, KGG, repeat PAJ_RS13670 IPR000073 Alpha/beta hydrolase fold-1 PAJ_RS13670 IPR000639 Epoxide hydrolase-like PAJ_RS13670 IPR029058 Alpha/Beta hydrolase fold PAJ_RS13675 IPR000014 PAS domain PAJ_RS13675 IPR000160 GGDEF domain PAJ_RS13675 IPR013655 PAS fold-3 PAJ_RS13675 IPR029787 Nucleotide cyclase PAJ_RS13685 IPR021236 Uncharacterised protein family YfdX PAJ_RS13690 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS13690 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS13690 IPR007891 CHASE3 PAJ_RS13695 IPR029069 HotDog domain PAJ_RS13700 IPR000014 PAS domain PAJ_RS13700 IPR001610 PAC motif PAJ_RS13700 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS13700 IPR013655 PAS fold-3 PAJ_RS13710 IPR000014 PAS domain PAJ_RS13710 IPR001610 PAC motif PAJ_RS13710 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS13715 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase PAJ_RS13715 IPR015069 Domain of unknown function DUF1868 PAJ_RS13725 IPR013022 Xylose isomerase-like, TIM barrel domain PAJ_RS13725 IPR014621 Uncharacterised conserved protein UCP036778, sugar epimerase-type PAJ_RS13745 IPR002577 Helix-turn-helix, HxlR type PAJ_RS13745 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS13750 IPR011701 Major facilitator superfamily PAJ_RS13750 IPR020846 Major facilitator superfamily domain PAJ_RS13755 IPR000620 Drug/metabolite transporter PAJ_RS13760 IPR000847 Transcription regulator HTH, LysR PAJ_RS13760 IPR005119 LysR, substrate-binding PAJ_RS13760 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS13765 IPR002933 Peptidase M20 PAJ_RS13765 IPR011650 Peptidase M20, dimerisation domain PAJ_RS13770 IPR005828 General substrate transporter PAJ_RS13770 IPR020846 Major facilitator superfamily domain PAJ_RS13780 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal PAJ_RS13780 IPR003346 Transposase, IS116/IS110/IS902 PAJ_RS13785 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain PAJ_RS13785 IPR011964 YVTN beta-propeller repeat PAJ_RS13785 IPR015943 WD40/YVTN repeat-like-containing domain PAJ_RS13785 IPR019405 Lactonase, 7-bladed beta propeller PAJ_RS13790 IPR004695 Voltage-dependent anion channel PAJ_RS13795 IPR005122 Uracil-DNA glycosylase-like PAJ_RS13800 IPR000182 GNAT domain PAJ_RS13800 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS13805 IPR010862 Protein of unknown function DUF1493 PAJ_RS13815 IPR019110 Uncharacterised protein family, RAQPRD PAJ_RS13820 IPR021676 Protein of unknown function DUF3262 PAJ_RS13825 IPR021356 Integrating conjugative element protein PFL4702 PAJ_RS13830 IPR021877 Protein of unknown function DUF3487 PAJ_RS13835 IPR021548 Protein of unknown function DUF2895 PAJ_RS13840 IPR021844 Integrating conjugative element protein, PFL4704 PAJ_RS13845 IPR021207 Integrating conjugative element protein, PFL4705 PAJ_RS13850 IPR022262 Lipoprotein, putative PAJ_RS13855 IPR022303 Conjugative transfer ATPase PAJ_RS13855 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase PAJ_RS13855 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS13870 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS13875 IPR011090 Integrating conjugative element protein, PFL4709 PAJ_RS13880 IPR009649 TraU PAJ_RS13880 IPR026331 Integrating conjugative element protein PFL_4710 PAJ_RS13885 IPR021204 Integrating conjugative element protein, PFL4711 PAJ_RS13895 IPR012931 TraG-like, N-terminal PAJ_RS13910 IPR011010 DNA breaking-rejoining enzyme, catalytic core PAJ_RS13910 IPR023109 Integrase/recombinase, N-terminal PAJ_RS13910 IPR024456 Integrase catalytic domain, putative PAJ_RS13910 IPR024457 Putative integrase, N-terminal PAJ_RS13915 IPR011646 KAP P-loop PAJ_RS13915 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS13950 IPR013610 Domain of unknown function DUF1738 PAJ_RS13950 IPR017113 Antirestriction, ArdC PAJ_RS13955 IPR009694 Protein of unknown function DUF1281 PAJ_RS13955 IPR023136 Api92-like domain PAJ_RS13960 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS13965 IPR000846 Dihydrodipicolinate reductase, N-terminal PAJ_RS13965 IPR016040 NAD(P)-binding domain PAJ_RS13970 IPR011701 Major facilitator superfamily PAJ_RS13970 IPR020846 Major facilitator superfamily domain PAJ_RS13975 IPR001962 Asparagine synthase PAJ_RS13975 IPR006426 Asparagine synthase, glutamine-hydrolyzing PAJ_RS13975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS13975 IPR017932 Glutamine amidotransferase type 2 domain PAJ_RS13975 IPR029055 Nucleophile aminohydrolases, N-terminal PAJ_RS13980 IPR009081 Acyl carrier protein-like PAJ_RS13985 IPR005509 A-factor biosynthesis hotdog domain PAJ_RS13990 IPR000399 TPP-binding enzyme, conserved site PAJ_RS13990 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding PAJ_RS13990 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain PAJ_RS13990 IPR017684 Phosphonopyruvate decarboxylase PAJ_RS13990 IPR029061 Thiamin diphosphate-binding fold PAJ_RS13995 IPR012698 Phosphoenolpyruvate phosphomutase, core PAJ_RS13995 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain PAJ_RS14000 IPR006197 Peptidase S24, LexA-like PAJ_RS14000 IPR015927 Peptidase S24/S26A/S26B/S26C PAJ_RS14000 IPR019759 Peptidase S24/S26A/S26B PAJ_RS14000 IPR028360 Peptidase S24/S26, beta-ribbon domain PAJ_RS14005 IPR001126 DNA-repair protein, UmuC-like PAJ_RS14010 IPR002104 Integrase, catalytic PAJ_RS14010 IPR004107 Integrase, SAM-like, N-terminal PAJ_RS14010 IPR011010 DNA breaking-rejoining enzyme, catalytic core PAJ_RS14010 IPR013762 Integrase-like, catalytic core PAJ_RS14010 IPR023109 Integrase/recombinase, N-terminal PAJ_RS14020 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAJ_RS14020 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAJ_RS14025 IPR003691 Putative fluoride ion transporter CrcB PAJ_RS14030 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site PAJ_RS14030 IPR005952 Phosphoglycerate mutase 1 PAJ_RS14030 IPR013078 Histidine phosphatase superfamily, clade-1 PAJ_RS14030 IPR029033 Histidine phosphatase superfamily PAJ_RS14035 IPR000941 Enolase PAJ_RS14035 IPR020810 Enolase, C-terminal PAJ_RS14035 IPR020811 Enolase, N-terminal PAJ_RS14035 IPR029017 Enolase N-terminal domain-like PAJ_RS14035 IPR029065 Enolase C-terminal domain-like PAJ_RS14040 IPR006015 Universal stress protein A PAJ_RS14040 IPR006016 UspA PAJ_RS14040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS14045 IPR004097 DHHA2 domain PAJ_RS14055 IPR004695 Voltage-dependent anion channel PAJ_RS14060 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain PAJ_RS14060 IPR011964 YVTN beta-propeller repeat PAJ_RS14060 IPR015943 WD40/YVTN repeat-like-containing domain PAJ_RS14060 IPR019405 Lactonase, 7-bladed beta propeller PAJ_RS14080 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAJ_RS14080 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAJ_RS14085 IPR000182 GNAT domain PAJ_RS14085 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS14090 IPR000620 Drug/metabolite transporter PAJ_RS14095 IPR001647 DNA-binding HTH domain, TetR-type PAJ_RS14095 IPR009057 Homeodomain-like PAJ_RS14095 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAJ_RS14095 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal PAJ_RS14105 IPR032811 PAJ_RS14105 PAJ_RS14120 IPR011093 Domain of unknown function DUF1528, C-terminal PAJ_RS14120 IPR011119 Uncharacterised domain, helicase/relaxase, putative PAJ_RS14120 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS14120 IPR022391 Integrating conjugative element relaxase, PFGI-1 class PAJ_RS14125 IPR002104 Integrase, catalytic PAJ_RS14125 IPR004107 Integrase, SAM-like, N-terminal PAJ_RS14125 IPR011010 DNA breaking-rejoining enzyme, catalytic core PAJ_RS14125 IPR013762 Integrase-like, catalytic core PAJ_RS14125 IPR023109 Integrase/recombinase, N-terminal PAJ_RS14135 IPR000644 CBS domain PAJ_RS14135 IPR001932 Protein phosphatase 2C (PP2C)-like domain PAJ_RS14145 IPR018530 Domain of unknown function DUF1987 PAJ_RS14150 IPR000160 GGDEF domain PAJ_RS14150 IPR029787 Nucleotide cyclase PAJ_RS14155 IPR001460 Penicillin-binding protein, transpeptidase PAJ_RS14155 IPR005311 Penicillin-binding protein, dimerisation domain PAJ_RS14155 IPR012338 Beta-lactamase/transpeptidase-like PAJ_RS14155 IPR017790 Penicillin-binding protein 2 PAJ_RS14160 IPR000845 Nucleoside phosphorylase domain PAJ_RS14160 IPR004402 Purine nucleoside phosphorylase DeoD-type PAJ_RS14160 IPR018016 Nucleoside phosphorylase, conserved site PAJ_RS14160 IPR018017 Nucleoside phosphorylase PAJ_RS14165 IPR006124 Metalloenzyme PAJ_RS14165 IPR010045 Phosphopentomutase PAJ_RS14165 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha PAJ_RS14165 IPR017850 Alkaline-phosphatase-like, core domain PAJ_RS14165 IPR024052 Phosphopentomutase DeoB cap domain PAJ_RS14170 IPR000053 Pyrimidine-nucleoside phosphorylase PAJ_RS14170 IPR000312 Glycosyl transferase, family 3 PAJ_RS14170 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal PAJ_RS14170 IPR013465 Thymidine phosphorylase PAJ_RS14170 IPR017459 Glycosyl transferase family 3, N-terminal domain PAJ_RS14170 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site PAJ_RS14170 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic PAJ_RS14175 IPR002915 DeoC/FbaB/ lacD aldolase PAJ_RS14175 IPR011343 Deoxyribose-phosphate aldolase PAJ_RS14175 IPR013785 Aldolase-type TIM barrel PAJ_RS14175 IPR023649 Deoxyribose-phosphate aldolase type II PAJ_RS14180 IPR001130 TatD family PAJ_RS14180 IPR018228 Deoxyribonuclease, TatD-related, conserved site PAJ_RS14180 IPR032466 PAJ_RS14180 PAJ_RS14185 IPR002641 Patatin/Phospholipase A2-related PAJ_RS14185 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PAJ_RS14190 IPR007055 BON domain PAJ_RS14190 IPR014004 Transport-associated and nodulation domain, bacteria PAJ_RS14195 IPR000795 Elongation factor, GTP-binding domain PAJ_RS14195 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 PAJ_RS14195 IPR004548 Peptide chain release factor 3 PAJ_RS14195 IPR005225 Small GTP-binding protein domain PAJ_RS14195 IPR009000 Translation protein, beta-barrel domain PAJ_RS14195 IPR009022 Elongation factor G, III-V domain PAJ_RS14195 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS14195 IPR031157 PAJ_RS14195 PAJ_RS14195 IPR032090 PAJ_RS14195 PAJ_RS14200 IPR001646 Pentapeptide repeat PAJ_RS14205 IPR001519 Ferritin PAJ_RS14205 IPR008331 Ferritin/DPS protein domain PAJ_RS14205 IPR009078 Ferritin-like superfamily PAJ_RS14205 IPR012347 Ferritin-related PAJ_RS14210 IPR000322 Glycoside hydrolase, family 31 PAJ_RS14210 IPR011013 Galactose mutarotase-like domain PAJ_RS14210 IPR017853 Glycoside hydrolase, superfamily PAJ_RS14210 IPR025887 Glycoside hydrolase family 31, N-terminal domain PAJ_RS14210 IPR033403 PAJ_RS14210 PAJ_RS14215 IPR011701 Major facilitator superfamily PAJ_RS14215 IPR020846 Major facilitator superfamily domain PAJ_RS14220 IPR000843 Transcription regulator HTH, LacI PAJ_RS14220 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS14220 IPR028082 Periplasmic binding protein-like I PAJ_RS14225 IPR001279 Beta-lactamase-like PAJ_RS14230 IPR000515 MetI-like domain PAJ_RS14235 IPR026045 Ferric binding protein PAJ_RS14240 IPR003439 ABC transporter-like PAJ_RS14240 IPR003593 AAA+ ATPase domain PAJ_RS14240 IPR013611 Transport-associated OB, type 2 PAJ_RS14240 IPR017871 ABC transporter, conserved site PAJ_RS14240 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS14245 IPR002123 Phospholipid/glycerol acyltransferase PAJ_RS14245 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS14255 IPR011051 RmlC-like cupin domain PAJ_RS14255 IPR013096 Cupin 2, conserved barrel PAJ_RS14255 IPR014500 Uncharacterised conserved protein UCP019307, cupin-type PAJ_RS14255 IPR014710 RmlC-like jelly roll fold PAJ_RS14265 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS14270 IPR003439 ABC transporter-like PAJ_RS14270 IPR003593 AAA+ ATPase domain PAJ_RS14270 IPR017871 ABC transporter, conserved site PAJ_RS14270 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS14270 IPR030679 PAJ_RS14270 PAJ_RS14275 IPR000515 MetI-like domain PAJ_RS14275 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS14280 IPR000182 GNAT domain PAJ_RS14280 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS14285 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS14290 IPR011251 Luciferase-like domain PAJ_RS14290 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A PAJ_RS14300 IPR011251 Luciferase-like domain PAJ_RS14300 IPR019949 Luciferase family oxidoreductase, group 1 PAJ_RS14310 IPR002933 Peptidase M20 PAJ_RS14310 IPR011650 Peptidase M20, dimerisation domain PAJ_RS14310 IPR017439 Amidohydrolase PAJ_RS14315 IPR019713 Inner membrane protein YlaC PAJ_RS14320 IPR000524 Transcription regulator HTH, GntR PAJ_RS14320 IPR004839 Aminotransferase, class I/classII PAJ_RS14320 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS14320 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS14320 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS14325 IPR000160 GGDEF domain PAJ_RS14325 IPR001633 EAL domain PAJ_RS14325 IPR005330 MHYT PAJ_RS14325 IPR029787 Nucleotide cyclase PAJ_RS14330 IPR007893 Spore coat protein U PAJ_RS14335 IPR007893 Spore coat protein U PAJ_RS14335 IPR008966 Adhesion domain PAJ_RS14340 IPR008962 PapD-like PAJ_RS14340 IPR016147 PapD, N-terminal, bacterial PAJ_RS14345 IPR000015 Outer membrane usher protein PAJ_RS14345 IPR025949 PapC-like, C-terminal domain PAJ_RS14350 IPR007893 Spore coat protein U PAJ_RS14355 IPR005828 General substrate transporter PAJ_RS14355 IPR005829 Sugar transporter, conserved site PAJ_RS14355 IPR020846 Major facilitator superfamily domain PAJ_RS14360 IPR003400 Biopolymer transport protein ExbD/TolR PAJ_RS14360 IPR014170 TonB system transport protein ExbD type-1 PAJ_RS14365 IPR002898 MotA/TolQ/ExbB proton channel PAJ_RS14365 IPR014164 TonB-system energizer ExbB type-1 PAJ_RS14370 IPR001996 Phosphotransferase system, IIB component, type 1 PAJ_RS14370 IPR003352 Phosphotransferase system, EIIC PAJ_RS14370 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site PAJ_RS14375 IPR000843 Transcription regulator HTH, LacI PAJ_RS14375 IPR001761 Periplasmic binding protein/LacI sugar binding domain PAJ_RS14375 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS14375 IPR028082 Periplasmic binding protein-like I PAJ_RS14385 IPR005829 Sugar transporter, conserved site PAJ_RS14385 IPR011701 Major facilitator superfamily PAJ_RS14385 IPR020846 Major facilitator superfamily domain PAJ_RS14390 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAJ_RS14390 IPR013022 Xylose isomerase-like, TIM barrel domain PAJ_RS14390 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAJ_RS14395 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal PAJ_RS14395 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit PAJ_RS14395 IPR015889 Intradiol ring-cleavage dioxygenase, core PAJ_RS14395 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal PAJ_RS14400 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal PAJ_RS14400 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit PAJ_RS14400 IPR015889 Intradiol ring-cleavage dioxygenase, core PAJ_RS14405 IPR000847 Transcription regulator HTH, LysR PAJ_RS14405 IPR005119 LysR, substrate-binding PAJ_RS14405 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS14410 IPR000073 Alpha/beta hydrolase fold-1 PAJ_RS14410 IPR003779 Carboxymuconolactone decarboxylase-like PAJ_RS14410 IPR012788 4-carboxymuconolactone decarboxylase PAJ_RS14410 IPR026968 3-oxoadipate enol-lactonase 1/2 PAJ_RS14410 IPR029032 AhpD-like PAJ_RS14410 IPR029058 Alpha/Beta hydrolase fold PAJ_RS14415 IPR000362 Fumarate lyase family PAJ_RS14415 IPR008948 L-Aspartase-like PAJ_RS14415 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase PAJ_RS14415 IPR019468 Adenylosuccinate lyase C-terminal PAJ_RS14415 IPR020557 Fumarate lyase, conserved site PAJ_RS14415 IPR022761 Fumarate lyase, N-terminal PAJ_RS14415 IPR024083 Fumarase/histidase, N-terminal PAJ_RS14420 IPR002155 Thiolase PAJ_RS14420 IPR012793 Beta-ketoadipyl CoA thiolase PAJ_RS14420 IPR016039 Thiolase-like PAJ_RS14420 IPR020610 Thiolase, active site PAJ_RS14420 IPR020613 Thiolase, conserved site PAJ_RS14420 IPR020615 Thiolase, acyl-enzyme intermediate active site PAJ_RS14420 IPR020616 Thiolase, N-terminal PAJ_RS14420 IPR020617 Thiolase, C-terminal PAJ_RS14425 IPR004164 Coenzyme A transferase active site PAJ_RS14425 IPR004165 Coenzyme A transferase family I PAJ_RS14425 IPR012791 3-oxoacid CoA-transferase, subunit B PAJ_RS14430 IPR004163 Coenzyme A transferase binding site PAJ_RS14430 IPR004165 Coenzyme A transferase family I PAJ_RS14430 IPR012792 3-oxoacid CoA-transferase, subunit A PAJ_RS14435 IPR005471 Transcription regulator IclR, N-terminal PAJ_RS14435 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS14435 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR PAJ_RS14435 IPR014757 Transcription regulator IclR, C-terminal PAJ_RS14435 IPR029016 GAF domain-like PAJ_RS14440 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme PAJ_RS14440 IPR006233 Cystathionine beta-lyase, bacterial PAJ_RS14440 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS14440 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS14440 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS14445 IPR032816 PAJ_RS14445 PAJ_RS14445 IPR032818 PAJ_RS14445 PAJ_RS14450 IPR009057 Homeodomain-like PAJ_RS14450 IPR009594 Transcription regulator HTH, AraC, N-terminal PAJ_RS14450 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS14455 IPR001395 Aldo/keto reductase PAJ_RS14455 IPR018170 Aldo/keto reductase, conserved site PAJ_RS14455 IPR020471 Aldo/keto reductase subgroup PAJ_RS14455 IPR023210 NADP-dependent oxidoreductase domain PAJ_RS14460 IPR001029 Flagellin, D0/D1 domain PAJ_RS14460 IPR001492 Flagellin PAJ_RS14465 IPR001117 Multicopper oxidase, type 1 PAJ_RS14465 IPR008972 Cupredoxin PAJ_RS14465 IPR011706 Multicopper oxidase, type 2 PAJ_RS14465 IPR011707 Multicopper oxidase, type 3 PAJ_RS14465 IPR026589 Cell division protein FtsP PAJ_RS14470 IPR002123 Phospholipid/glycerol acyltransferase PAJ_RS14470 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase PAJ_RS14475 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal PAJ_RS14475 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative PAJ_RS14475 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel PAJ_RS14475 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta PAJ_RS14475 IPR013760 DNA topoisomerase, type IIA-like domain PAJ_RS14475 IPR024946 Arginine repressor C-terminal-like domain PAJ_RS14480 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PAJ_RS14480 IPR007737 Mga helix-turn-helix domain PAJ_RS14480 IPR011608 PRD domain PAJ_RS14480 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS14480 IPR013196 Helix-turn-helix, type 11 PAJ_RS14485 IPR002178 PTS EIIA type-2 domain PAJ_RS14485 IPR004715 Phosphotransferase system, IIA component fructose subfamily PAJ_RS14485 IPR016152 Phosphotransferase/anion transporter PAJ_RS14490 IPR003353 Phosphotransferase system, fructose-specific IIB subunit PAJ_RS14490 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PAJ_RS14495 IPR003352 Phosphotransferase system, EIIC PAJ_RS14495 IPR006327 Phosphotransferase system, fructose IIC component PAJ_RS14500 IPR000771 Ketose-bisphosphate aldolase, class-II PAJ_RS14500 IPR013785 Aldolase-type TIM barrel PAJ_RS14505 IPR000771 Ketose-bisphosphate aldolase, class-II PAJ_RS14505 IPR013785 Aldolase-type TIM barrel PAJ_RS14510 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS14515 IPR003680 Flavodoxin-like fold PAJ_RS14515 IPR029039 Flavoprotein-like PAJ_RS14520 IPR007138 Antibiotic biosynthesis monooxygenase-like domain PAJ_RS14520 IPR011008 Dimeric alpha-beta barrel PAJ_RS14525 IPR001241 DNA topoisomerase, type IIA PAJ_RS14525 IPR002288 DNA gyrase B subunit, C-terminal PAJ_RS14525 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS14525 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative PAJ_RS14525 IPR006171 Toprim domain PAJ_RS14525 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 PAJ_RS14525 IPR013759 DNA topoisomerase, type IIA, central domain PAJ_RS14525 IPR013760 DNA topoisomerase, type IIA-like domain PAJ_RS14525 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAJ_RS14525 IPR018522 DNA topoisomerase, type IIA, conserved site PAJ_RS14525 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS14530 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA PAJ_RS14530 IPR029058 Alpha/Beta hydrolase fold PAJ_RS14535 IPR004843 Calcineurin-like phosphoesterase domain, apaH type PAJ_RS14535 IPR013622 Calcineurin-like phosphoesterase C-terminal PAJ_RS14535 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA PAJ_RS14535 IPR029052 Metallo-dependent phosphatase-like PAJ_RS14540 IPR009659 Protein of unknown function DUF1249 PAJ_RS14545 IPR000086 NUDIX hydrolase domain PAJ_RS14545 IPR004385 Nucleoside diphosphate pyrophosphatase PAJ_RS14545 IPR015797 NUDIX hydrolase domain-like PAJ_RS14550 IPR003423 Outer membrane efflux protein PAJ_RS14550 IPR010130 Type I secretion outer membrane protein, TolC PAJ_RS14555 IPR009576 Biofilm formation YgiB PAJ_RS14560 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain PAJ_RS14560 IPR016185 Pre-ATP-grasp domain PAJ_RS14565 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B PAJ_RS14565 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type PAJ_RS14570 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB PAJ_RS14570 IPR017945 DHBP synthase RibB-like alpha/beta domain PAJ_RS14575 IPR007475 Membrane fusogenic activity PAJ_RS14580 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PAJ_RS14580 IPR004821 Cytidyltransferase-like domain PAJ_RS14580 IPR011611 Carbohydrate kinase PfkB PAJ_RS14580 IPR011913 RfaE bifunctional protein, domain I PAJ_RS14580 IPR011914 RfaE bifunctional protein, domain II PAJ_RS14580 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS14580 IPR023030 Bifunctional protein HldE PAJ_RS14580 IPR029056 Ribokinase-like PAJ_RS14585 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain PAJ_RS14585 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase PAJ_RS14585 IPR023057 Glutamate-ammonia-ligase adenylyltransferase PAJ_RS14590 IPR023577 CYTH-like domain PAJ_RS14590 IPR033469 PAJ_RS14590 PAJ_RS14595 IPR003646 SH3-like domain, bacterial-type PAJ_RS14595 IPR016476 SH3 domain protein PAJ_RS14600 IPR002646 Poly A polymerase, head domain PAJ_RS14600 IPR006674 HD domain PAJ_RS14600 IPR012006 tRNA nucleotidyltransferase, proteobacteria PAJ_RS14600 IPR032828 PAJ_RS14600 PAJ_RS14605 IPR003824 Undecaprenyl-diphosphatase UppP PAJ_RS14610 IPR006156 Dihydroneopterin aldolase PAJ_RS14610 IPR006157 Dihydroneopterin aldolase/epimerase domain PAJ_RS14615 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY PAJ_RS14620 IPR000905 Gcp-like domain PAJ_RS14620 IPR017860 Peptidase M22, conserved site PAJ_RS14620 IPR017861 Kae1/YgjD family PAJ_RS14620 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD PAJ_RS14625 IPR001911 Ribosomal protein S21 PAJ_RS14625 IPR018278 Ribosomal protein S21, conserved site PAJ_RS14630 IPR002694 Zinc finger, CHC2-type PAJ_RS14630 IPR006171 Toprim domain PAJ_RS14630 IPR006295 DNA primase, DnaG PAJ_RS14630 IPR013173 DNA primase DnaG, DnaB-binding domain PAJ_RS14630 IPR013264 DNA primase, catalytic core, N-terminal PAJ_RS14630 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PAJ_RS14630 IPR019475 DNA primase, DnaB-helicase binding domain PAJ_RS14630 IPR030846 PAJ_RS14630 PAJ_RS14635 IPR000943 RNA polymerase sigma-70 PAJ_RS14635 IPR007127 RNA polymerase sigma factor 70, region 1.1 PAJ_RS14635 IPR007624 RNA polymerase sigma-70 region 3 PAJ_RS14635 IPR007627 RNA polymerase sigma-70 region 2 PAJ_RS14635 IPR007630 RNA polymerase sigma-70 region 4 PAJ_RS14635 IPR007631 RNA polymerase sigma factor 70, non-essential domain PAJ_RS14635 IPR009042 RNA polymerase sigma-70 region 1.2 PAJ_RS14635 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS14635 IPR012760 RNA polymerase sigma factor RpoD, C-terminal PAJ_RS14635 IPR013324 RNA polymerase sigma factor, region 3/4 PAJ_RS14635 IPR013325 RNA polymerase sigma factor, region 2 PAJ_RS14635 IPR014284 RNA polymerase sigma-70 like domain PAJ_RS14635 IPR028630 RNA polymerase sigma factor RpoD PAJ_RS14640 IPR005122 Uracil-DNA glycosylase-like PAJ_RS14640 IPR015637 DNA glycosylase, G/T mismatch PAJ_RS14665 IPR008651 Uncharacterised protein family HicB PAJ_RS14665 IPR010985 Ribbon-helix-helix PAJ_RS14665 IPR013321 Arc-type ribbon-helix-helix PAJ_RS14675 IPR007684 Zinc finger, Ogr/Delta-type PAJ_RS14685 IPR009734 Myoviridae, GpU PAJ_RS14685 IPR016912 Bacteriophage P2, GpU PAJ_RS14690 IPR010090 Phage tail tape measure protein PAJ_RS14695 IPR019289 Bacteriophage tail protein Gp41, putative PAJ_RS14700 IPR006498 Bacteriophage P2, FII, major tail tube protein PAJ_RS14705 IPR007067 Tail sheath protein PAJ_RS14710 IPR006118 Recombinase, conserved site PAJ_RS14710 IPR006119 Resolvase, N-terminal PAJ_RS14710 IPR006120 Resolvase, HTH domain PAJ_RS14710 IPR009057 Homeodomain-like PAJ_RS14715 IPR011083 Phage tail collar domain PAJ_RS14720 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly PAJ_RS14725 IPR011083 Phage tail collar domain PAJ_RS14725 IPR022225 Phage tail fibre protein PAJ_RS14730 IPR006521 Tail protein I PAJ_RS14735 IPR006949 Baseplate assembly protein J-like, predicted PAJ_RS14735 IPR014507 Baseplate assembly protein J, predicted PAJ_RS14740 IPR007048 GpW/Gp25/anti-adapter protein IraD PAJ_RS14745 IPR006531 Gp5 N-terminal PAJ_RS14745 IPR013046 Bacteriophage Mu/P2, baseplate assembly PAJ_RS14750 IPR009678 Bacteriophage tail completion protein R PAJ_RS14755 IPR020000 Bacteriophage P2, LysB PAJ_RS14760 IPR002196 Glycoside hydrolase, family 24 PAJ_RS14760 IPR023346 Lysozyme-like domain PAJ_RS14760 IPR023347 Lysozyme domain PAJ_RS14770 IPR008861 Bacteriophage P2, GpX PAJ_RS14780 IPR008766 Replication gene A protein PAJ_RS14785 IPR000962 Zinc finger, DksA/TraR C4-type PAJ_RS14785 IPR012783 Zinc finger, C4 DksA/TraR-type PAJ_RS14790 IPR020126 Protein of unknown function DUF2732 PAJ_RS14800 IPR010744 Bacteriophage CI repressor PAJ_RS14800 IPR032499 PAJ_RS14800 PAJ_RS14805 IPR000771 Ketose-bisphosphate aldolase, class-II PAJ_RS14805 IPR013785 Aldolase-type TIM barrel PAJ_RS14810 IPR003352 Phosphotransferase system, EIIC PAJ_RS14810 IPR003353 Phosphotransferase system, fructose-specific IIB subunit PAJ_RS14810 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PAJ_RS14810 IPR006327 Phosphotransferase system, fructose IIC component PAJ_RS14815 IPR002178 PTS EIIA type-2 domain PAJ_RS14815 IPR004715 Phosphotransferase system, IIA component fructose subfamily PAJ_RS14815 IPR016152 Phosphotransferase/anion transporter PAJ_RS14820 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PAJ_RS14820 IPR007737 Mga helix-turn-helix domain PAJ_RS14820 IPR011608 PRD domain PAJ_RS14820 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS14820 IPR013196 Helix-turn-helix, type 11 PAJ_RS14825 IPR001902 Sulphate anion transporter PAJ_RS14825 IPR002645 STAS domain PAJ_RS14825 IPR011547 Sulphate transporter PAJ_RS14830 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS14830 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS14830 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PAJ_RS14830 IPR024478 4HB MCP domain PAJ_RS14840 IPR003660 HAMP linker domain PAJ_RS14840 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS14855 IPR024753 Regulatory protein AriR PAJ_RS14880 IPR000014 PAS domain PAJ_RS14880 IPR000160 GGDEF domain PAJ_RS14880 IPR001633 EAL domain PAJ_RS14880 IPR003018 GAF domain PAJ_RS14880 IPR013767 PAS fold PAJ_RS14880 IPR029016 GAF domain-like PAJ_RS14880 IPR029787 Nucleotide cyclase PAJ_RS14885 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS14890 IPR003660 HAMP linker domain PAJ_RS14890 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS14895 IPR001633 EAL domain PAJ_RS14895 IPR003018 GAF domain PAJ_RS14895 IPR029016 GAF domain-like PAJ_RS14900 IPR000160 GGDEF domain PAJ_RS14900 IPR029151 Periplasmic sensor domain-like PAJ_RS14900 IPR029787 Nucleotide cyclase PAJ_RS14900 IPR033479 PAJ_RS14900 PAJ_RS14910 IPR019732 Sigma-S stabilisation anti-adaptor protein PAJ_RS14915 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site PAJ_RS14915 IPR005905 D-alanine--D-alanine ligase PAJ_RS14915 IPR011095 D-alanine--D-alanine ligase, C-terminal PAJ_RS14915 IPR011127 D-alanine--D-alanine ligase, N-terminal domain PAJ_RS14915 IPR013815 ATP-grasp fold, subdomain 1 PAJ_RS14915 IPR013816 ATP-grasp fold, subdomain 2 PAJ_RS14915 IPR016185 Pre-ATP-grasp domain PAJ_RS14920 IPR000160 GGDEF domain PAJ_RS14920 IPR029787 Nucleotide cyclase PAJ_RS14925 IPR001902 Sulphate anion transporter PAJ_RS14925 IPR011547 Sulphate transporter PAJ_RS14930 IPR001765 Carbonic anhydrase PAJ_RS14930 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site PAJ_RS14935 IPR005519 Acid phosphatase (Class B) PAJ_RS14935 IPR006423 5-nucleotidase lipoprotein e(P4) PAJ_RS14935 IPR023214 HAD-like domain PAJ_RS14940 IPR003730 Multi-copper polyphenol oxidoreductase, laccase PAJ_RS14940 IPR011324 Cytotoxic necrotizing factor-like, catalytic PAJ_RS14945 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal PAJ_RS14945 IPR013785 Aldolase-type TIM barrel PAJ_RS14945 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS14950 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PAJ_RS14950 IPR007848 Methyltransferase small domain PAJ_RS14950 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD PAJ_RS14950 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS14955 IPR002725 Protein of unknown function DUF45 PAJ_RS14960 IPR001807 Chloride channel, voltage gated PAJ_RS14960 IPR014743 Chloride channel, core PAJ_RS14965 IPR000683 Oxidoreductase, N-terminal PAJ_RS14965 IPR016040 NAD(P)-binding domain PAJ_RS14975 IPR007392 D-galactarate dehydratase/Altronate hydrolase, C-terminal PAJ_RS14975 IPR013974 SAF domain PAJ_RS14980 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS14980 IPR013118 Mannitol dehydrogenase, C-terminal PAJ_RS14980 IPR013131 Mannitol dehydrogenase, N-terminal PAJ_RS14980 IPR013328 Dehydrogenase, multihelical PAJ_RS14980 IPR016040 NAD(P)-binding domain PAJ_RS14985 IPR003766 Uronate isomerase PAJ_RS14985 IPR023177 Uronate isomerase, domain 2 PAJ_RS14985 IPR032466 PAJ_RS14985 PAJ_RS14990 IPR004744 D-galactonate transporter PAJ_RS14990 IPR011701 Major facilitator superfamily PAJ_RS14990 IPR020846 Major facilitator superfamily domain PAJ_RS14995 IPR000524 Transcription regulator HTH, GntR PAJ_RS14995 IPR008920 Transcription regulator FadR/GntR, C-terminal PAJ_RS14995 IPR011711 GntR, C-terminal PAJ_RS14995 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS15000 IPR032816 PAJ_RS15000 PAJ_RS15000 IPR032818 PAJ_RS15000 PAJ_RS15005 IPR026574 Modulator protein MzrA PAJ_RS15005 IPR027398 SecD export protein N-terminal TM domain PAJ_RS15010 IPR009468 Protein of unknown function DUF1090 PAJ_RS15015 IPR010279 Protein of unknown function DUF883, ElaB PAJ_RS15020 IPR009937 Protein of unknown function DUF1469 PAJ_RS15025 IPR025612 YqjK-like protein PAJ_RS15030 IPR032808 PAJ_RS15030 PAJ_RS15035 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase PAJ_RS15040 IPR008217 Domain of unknown function DUF125, transmembrane PAJ_RS15045 IPR002376 Formyl transferase, N-terminal PAJ_RS15045 IPR005793 Formyl transferase, C-terminal PAJ_RS15045 IPR011034 Formyl transferase, C-terminal-like PAJ_RS15050 IPR004045 Glutathione S-transferase, N-terminal PAJ_RS15050 IPR010987 Glutathione S-transferase, C-terminal-like PAJ_RS15050 IPR012336 Thioredoxin-like fold PAJ_RS15050 IPR016639 Glutathione S-transferase (GST) PAJ_RS15055 IPR004694 Hydroxy amino acid transporter PAJ_RS15055 IPR018227 Tryptophan/tyrosine permease PAJ_RS15055 IPR023726 Threonine/serine transporter TdcC PAJ_RS15060 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site PAJ_RS15060 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAJ_RS15065 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal PAJ_RS15065 IPR011013 Galactose mutarotase-like domain PAJ_RS15065 IPR013783 Immunoglobulin-like fold PAJ_RS15065 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D PAJ_RS15065 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup PAJ_RS15065 IPR014756 Immunoglobulin E-set PAJ_RS15075 IPR000878 Tetrapyrrole methylase PAJ_RS15075 IPR008189 rRNA small subunit methyltransferase I PAJ_RS15075 IPR014776 Tetrapyrrole methylase, subdomain 2 PAJ_RS15075 IPR014777 Tetrapyrrole methylase, subdomain 1 PAJ_RS15075 IPR018063 SAM-dependent methyltransferase RsmI, conserved site PAJ_RS15080 IPR007443 Penicillin-binding protein activator LpoA PAJ_RS15080 IPR028082 Periplasmic binding protein-like I PAJ_RS15085 IPR003509 Uncharacterised protein family UPF0102 PAJ_RS15085 IPR011335 Restriction endonuclease type II-like PAJ_RS15085 IPR011856 tRNA endonuclease-like domain PAJ_RS15090 IPR001347 Sugar isomerase (SIS) PAJ_RS15090 IPR023070 DnaA initiator-associating protein PAJ_RS15095 IPR007055 BON domain PAJ_RS15095 IPR014004 Transport-associated and nodulation domain, bacteria PAJ_RS15100 IPR003829 Pirin, N-terminal domain PAJ_RS15100 IPR011051 RmlC-like cupin domain PAJ_RS15100 IPR012093 Pirin PAJ_RS15100 IPR014710 RmlC-like jelly roll fold PAJ_RS15105 IPR000847 Transcription regulator HTH, LysR PAJ_RS15105 IPR005119 LysR, substrate-binding PAJ_RS15105 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS15110 IPR002178 PTS EIIA type-2 domain PAJ_RS15110 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PAJ_RS15110 IPR007737 Mga helix-turn-helix domain PAJ_RS15110 IPR011608 PRD domain PAJ_RS15110 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS15110 IPR013196 Helix-turn-helix, type 11 PAJ_RS15110 IPR016152 Phosphotransferase/anion transporter PAJ_RS15115 IPR010763 Protein of unknown function DUF1341 PAJ_RS15120 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like PAJ_RS15120 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS15120 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS15120 IPR018319 L-seryl-tRNA selenium transferase-like PAJ_RS15125 IPR011059 Metal-dependent hydrolase, composite domain PAJ_RS15125 IPR020043 Amidohydrolase EF0837/AHA3915, putative PAJ_RS15125 IPR032466 PAJ_RS15125 PAJ_RS15130 IPR025456 Protein of unknown function DUF4310 PAJ_RS15135 IPR020042 Protein of unknown function DUF4311 PAJ_RS15140 IPR020037 Protein of unknown function DUF4312 PAJ_RS15145 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family PAJ_RS15145 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 PAJ_RS15150 IPR011608 PRD domain PAJ_RS15150 IPR020044 PRD domain protein, EF0829/AHA3910 PAJ_RS15155 IPR001927 Sodium:galactoside symporter PAJ_RS15155 IPR018043 Sodium:galactoside symporter, conserved site PAJ_RS15155 IPR020846 Major facilitator superfamily domain PAJ_RS15160 IPR001927 Sodium:galactoside symporter PAJ_RS15160 IPR018043 Sodium:galactoside symporter, conserved site PAJ_RS15160 IPR020846 Major facilitator superfamily domain PAJ_RS15165 IPR002781 Transmembrane protein TauE like PAJ_RS15170 IPR000322 Glycoside hydrolase, family 31 PAJ_RS15170 IPR011013 Galactose mutarotase-like domain PAJ_RS15170 IPR017853 Glycoside hydrolase, superfamily PAJ_RS15175 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase PAJ_RS15175 IPR011013 Galactose mutarotase-like domain PAJ_RS15175 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup PAJ_RS15180 IPR008928 Six-hairpin glycosidase-like PAJ_RS15180 IPR012341 Six-hairpin glycosidase PAJ_RS15180 IPR030875 PAJ_RS15180 PAJ_RS15185 IPR002915 DeoC/FbaB/ lacD aldolase PAJ_RS15185 IPR013785 Aldolase-type TIM barrel PAJ_RS15185 IPR017291 Aldolase, YihT PAJ_RS15190 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site PAJ_RS15190 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding PAJ_RS15190 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS15190 IPR013328 Dehydrogenase, multihelical PAJ_RS15190 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type PAJ_RS15190 IPR016040 NAD(P)-binding domain PAJ_RS15190 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain PAJ_RS15190 IPR030876 PAJ_RS15190 PAJ_RS15195 IPR002139 Ribokinase PAJ_RS15195 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PAJ_RS15195 IPR011611 Carbohydrate kinase PfkB PAJ_RS15195 IPR029056 Ribokinase-like PAJ_RS15195 IPR030877 PAJ_RS15195 PAJ_RS15200 IPR001034 HTH DeoR N-terminal domain PAJ_RS15200 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS15200 IPR014036 DeoR C-terminal sensor domain PAJ_RS15200 IPR018356 Transcription regulator, HTH DeoR-type, conserved site PAJ_RS15205 IPR009155 Cytochrome b562 PAJ_RS15205 IPR010980 Cytochrome c/b562 PAJ_RS15210 IPR002510 TldD/PmbA PAJ_RS15215 IPR006839 Ribosome-associated, YjgA PAJ_RS15215 IPR023153 PSPTO4464-like domain PAJ_RS15220 IPR000713 Mur ligase, N-terminal PAJ_RS15220 IPR004101 Mur ligase, C-terminal PAJ_RS15220 IPR005757 Murein peptide ligase PAJ_RS15220 IPR013221 Mur ligase, central PAJ_RS15220 IPR016040 NAD(P)-binding domain PAJ_RS15225 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase PAJ_RS15225 IPR020548 Fructose-1,6-bisphosphatase, active site PAJ_RS15225 IPR028343 Fructose-1,6-bisphosphatase PAJ_RS15225 IPR033391 PAJ_RS15225 PAJ_RS15230 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding PAJ_RS15230 IPR003660 HAMP linker domain PAJ_RS15230 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS15230 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS15235 IPR009739 Protein of unknown function DUF1311 PAJ_RS15240 IPR007382 Uncharacterised protein family UPF0756, transmembrame PAJ_RS15245 IPR008162 Inorganic pyrophosphatase PAJ_RS15250 IPR025686 Glucosyl transferase II PAJ_RS15255 IPR009288 AIG2-like PAJ_RS15255 IPR013024 Butirosin biosynthesis, BtrG-like PAJ_RS15260 IPR007452 Protein of unknown function DUF490 PAJ_RS15265 IPR000184 Bacterial surface antigen (D15) PAJ_RS15265 IPR010827 Surface antigen variable number PAJ_RS15270 IPR002550 Domain of unknown function DUF21 PAJ_RS15270 IPR005170 Transporter-associated domain PAJ_RS15270 IPR016166 FAD-binding, type 2 PAJ_RS15270 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 PAJ_RS15275 IPR009491 Protein of unknown function DUF1107 PAJ_RS15280 IPR006513 Conserved hypothetical protein CHP01626, YtfJ PAJ_RS15280 IPR012336 Thioredoxin-like fold PAJ_RS15285 IPR000760 Inositol monophosphatase PAJ_RS15285 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial PAJ_RS15285 IPR020583 Inositol monophosphatase, metal-binding site PAJ_RS15290 IPR004843 Calcineurin-like phosphoesterase domain, apaH type PAJ_RS15290 IPR006146 5'-Nucleotidase, conserved site PAJ_RS15290 IPR006179 5'-Nucleotidase/apyrase PAJ_RS15290 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase PAJ_RS15290 IPR008334 5'-Nucleotidase, C-terminal PAJ_RS15290 IPR029052 Metallo-dependent phosphatase-like PAJ_RS15295 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal PAJ_RS15295 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain PAJ_RS15295 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PAJ_RS15300 IPR007340 Opacity-associated protein A PAJ_RS15300 IPR013731 Opacity-associated protein A, N-terminal PAJ_RS15310 IPR000244 Ribosomal protein L9 PAJ_RS15310 IPR009027 Ribosomal protein L9/RNase H1, N-terminal PAJ_RS15310 IPR020069 Ribosomal protein L9, C-terminal PAJ_RS15310 IPR020070 Ribosomal protein L9, N-terminal PAJ_RS15310 IPR020594 Ribosomal protein L9, bacteria/chloroplast PAJ_RS15315 IPR001648 Ribosomal protein S18 PAJ_RS15315 IPR018275 Ribosomal protein S18, conserved site PAJ_RS15320 IPR000424 Primosome PriB/single-strand DNA-binding PAJ_RS15320 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS15320 IPR023646 Primosomal replication protein PriB PAJ_RS15325 IPR000529 Ribosomal protein S6 PAJ_RS15325 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PAJ_RS15325 IPR020814 Ribosomal protein S6, plastid/chloroplast PAJ_RS15325 IPR020815 Ribosomal protein S6, conserved site PAJ_RS15330 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain PAJ_RS15330 IPR029058 Alpha/Beta hydrolase fold PAJ_RS15335 IPR003660 HAMP linker domain PAJ_RS15335 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS15335 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS15335 IPR029151 Periplasmic sensor domain-like PAJ_RS15335 IPR033462 PAJ_RS15335 PAJ_RS15340 IPR010854 Domain of unknown function DUF1471 PAJ_RS15340 IPR025543 Dodecin-like PAJ_RS15345 IPR006089 Acyl-CoA dehydrogenase, conserved site PAJ_RS15345 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain PAJ_RS15345 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal PAJ_RS15345 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain PAJ_RS15355 IPR003029 Ribosomal protein S1, RNA-binding domain PAJ_RS15355 IPR004476 Ribonuclease II/ribonuclease R PAJ_RS15355 IPR011129 Cold shock protein PAJ_RS15355 IPR011805 Ribonuclease R PAJ_RS15355 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS15355 IPR013223 Ribonuclease B, N-terminal OB domain PAJ_RS15355 IPR013668 Ribonuclease R winged-helix domain PAJ_RS15355 IPR022966 Ribonuclease II/R, conserved site PAJ_RS15355 IPR022967 RNA-binding domain, S1 PAJ_RS15360 IPR000944 Transcription regulator Rrf2-like PAJ_RS15360 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS15365 IPR001114 Adenylosuccinate synthetase PAJ_RS15365 IPR018220 Adenylosuccinate synthase, active site PAJ_RS15365 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS15365 IPR033128 PAJ_RS15365 PAJ_RS15370 IPR019201 Protein of unknown function DUF2065 PAJ_RS15375 IPR001107 Band 7 protein PAJ_RS15375 IPR001972 Stomatin family PAJ_RS15375 IPR010200 HflC PAJ_RS15380 IPR001107 Band 7 protein PAJ_RS15380 IPR001972 Stomatin family PAJ_RS15380 IPR010201 HflK PAJ_RS15380 IPR020980 Menbrane protein HflK, N-terminal PAJ_RS15385 IPR006073 GTP binding domain PAJ_RS15385 IPR009022 Elongation factor G, III-V domain PAJ_RS15385 IPR016496 GTPase HflX PAJ_RS15385 IPR025121 GTPase HflX N-terminal domain PAJ_RS15385 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS15385 IPR032305 PAJ_RS15385 PAJ_RS15390 IPR005001 Host factor Hfq PAJ_RS15390 IPR010920 Like-Sm (LSM) domain PAJ_RS15395 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase PAJ_RS15395 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS15400 IPR002099 DNA mismatch repair protein family PAJ_RS15400 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS15400 IPR013507 DNA mismatch repair protein, C-terminal PAJ_RS15400 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAJ_RS15400 IPR014762 DNA mismatch repair, conserved site PAJ_RS15400 IPR014790 MutL, C-terminal, dimerisation PAJ_RS15400 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS15400 IPR020667 DNA mismatch repair protein, MutL PAJ_RS15405 IPR002508 Cell wall hydrolase/autolysin, catalytic PAJ_RS15405 IPR018392 LysM domain PAJ_RS15405 IPR021731 AMIN domain PAJ_RS15410 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE PAJ_RS15410 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS15415 IPR000631 YjeF C-terminal domain PAJ_RS15415 IPR004443 YjeF N-terminal domain PAJ_RS15415 IPR017953 Carbohydrate kinase, predicted, conserved site PAJ_RS15415 IPR029056 Ribokinase-like PAJ_RS15415 IPR030677 PAJ_RS15415 PAJ_RS15420 IPR004453 Epoxyqueuosine reductase QueG PAJ_RS15420 IPR009051 Alpha-helical ferredoxin PAJ_RS15420 IPR013542 Domain of unknown function DUF1730 PAJ_RS15420 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PAJ_RS15440 IPR012337 Ribonuclease H-like domain PAJ_RS15440 IPR013520 Exonuclease, RNase T/DNA polymerase III PAJ_RS15440 IPR022894 Oligoribonuclease PAJ_RS15450 IPR003817 Phosphatidylserine decarboxylase-related PAJ_RS15450 IPR033177 PAJ_RS15450 PAJ_RS15450 IPR033178 PAJ_RS15450 PAJ_RS15455 IPR006685 Mechanosensitive ion channel MscS PAJ_RS15455 IPR010920 Like-Sm (LSM) domain PAJ_RS15455 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 PAJ_RS15455 IPR011066 Mechanosensitive ion channel MscS, C-terminal PAJ_RS15455 IPR024393 Mechanosensitive ion channel MscS, porin domain PAJ_RS15455 IPR025692 Mechanosensitive ion channel inner membrane domain 1 PAJ_RS15460 IPR001236 Lactate/malate dehydrogenase, N-terminal PAJ_RS15460 IPR001252 Malate dehydrogenase, active site PAJ_RS15460 IPR001557 L-lactate/malate dehydrogenase PAJ_RS15460 IPR010097 Malate dehydrogenase, type 1 PAJ_RS15460 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal PAJ_RS15460 IPR016040 NAD(P)-binding domain PAJ_RS15460 IPR022383 Lactate/malate dehydrogenase, C-terminal PAJ_RS15460 IPR023958 Malate dehydrogenase, type 1, bacterial PAJ_RS15465 IPR001669 Arginine repressor PAJ_RS15465 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS15465 IPR020899 Arginine repressor, C-terminal PAJ_RS15465 IPR020900 Arginine repressor, DNA-binding domain PAJ_RS15465 IPR024946 Arginine repressor C-terminal-like domain PAJ_RS15470 IPR010854 Domain of unknown function DUF1471 PAJ_RS15470 IPR025543 Dodecin-like PAJ_RS15475 IPR010854 Domain of unknown function DUF1471 PAJ_RS15475 IPR025543 Dodecin-like PAJ_RS15480 IPR010854 Domain of unknown function DUF1471 PAJ_RS15480 IPR025543 Dodecin-like PAJ_RS15485 IPR006842 Transposase (putative), YhgA-like PAJ_RS15485 IPR010106 Conserved hypothetical protein CHP01784 PAJ_RS15490 IPR000468 Barstar (barnase inhibitor) PAJ_RS15495 IPR010102 Succinate semialdehyde dehydrogenase PAJ_RS15495 IPR015590 Aldehyde dehydrogenase domain PAJ_RS15495 IPR016161 Aldehyde/histidinol dehydrogenase PAJ_RS15495 IPR016162 Aldehyde dehydrogenase, N-terminal PAJ_RS15495 IPR016163 Aldehyde dehydrogenase, C-terminal PAJ_RS15495 IPR029510 Aldehyde dehydrogenase, glutamic acid active site PAJ_RS15500 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein PAJ_RS15500 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB PAJ_RS15505 IPR006143 RND efflux pump, membrane fusion protein PAJ_RS15505 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA PAJ_RS15510 IPR012451 Protein of unknown function DUF1656 PAJ_RS15515 IPR000847 Transcription regulator HTH, LysR PAJ_RS15515 IPR005119 LysR, substrate-binding PAJ_RS15515 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS15520 IPR002510 TldD/PmbA PAJ_RS15520 IPR025502 TldD PAJ_RS15525 IPR001969 Aspartic peptidase, active site PAJ_RS15525 IPR011836 Conserved hypothetical protein CHP02099 PAJ_RS15525 IPR025263 Domain of unknown function DUF3971 PAJ_RS15525 IPR032712 PAJ_RS15525 PAJ_RS15530 IPR003029 Ribosomal protein S1, RNA-binding domain PAJ_RS15530 IPR004659 Ribonuclease E/G PAJ_RS15530 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS15530 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G PAJ_RS15530 IPR022967 RNA-binding domain, S1 PAJ_RS15535 IPR003697 Maf-like protein PAJ_RS15535 IPR029001 Inosine triphosphate pyrophosphatase-like PAJ_RS15540 IPR007227 Cell shape-determining protein MreD PAJ_RS15540 IPR026034 Cell shape-determining protein MreD, proteobacterial type PAJ_RS15545 IPR007221 Rod shape-determining protein MreC PAJ_RS15550 IPR004753 Cell shape determining protein MreB/Mrl PAJ_RS15555 IPR000160 GGDEF domain PAJ_RS15555 IPR001633 EAL domain PAJ_RS15555 IPR029787 Nucleotide cyclase PAJ_RS15555 IPR033423 PAJ_RS15555 PAJ_RS15560 IPR000572 Oxidoreductase, molybdopterin-binding domain PAJ_RS15560 IPR022867 Sulphoxide reductase catalytic subunit YedY PAJ_RS15565 IPR013130 Ferric reductase transmembrane component-like domain PAJ_RS15565 IPR022837 Sulphoxide reductase heme-binding subunit YedZ PAJ_RS15570 IPR001874 Dehydroquinase, class II PAJ_RS15570 IPR018509 Dehydroquinase, class II, conserved site PAJ_RS15575 IPR000089 Biotin/lipoyl attachment PAJ_RS15575 IPR001249 Acetyl-CoA biotin carboxyl carrier PAJ_RS15575 IPR001882 Biotin-binding site PAJ_RS15575 IPR011053 Single hybrid motif PAJ_RS15580 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase PAJ_RS15580 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain PAJ_RS15580 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal PAJ_RS15580 IPR005482 Biotin carboxylase, C-terminal PAJ_RS15580 IPR011054 Rudiment single hybrid motif PAJ_RS15580 IPR013815 ATP-grasp fold, subdomain 1 PAJ_RS15580 IPR013816 ATP-grasp fold, subdomain 2 PAJ_RS15580 IPR016185 Pre-ATP-grasp domain PAJ_RS15585 IPR010398 Protein of unknown function DUF997 PAJ_RS15590 IPR001734 Sodium/solute symporter PAJ_RS15590 IPR011849 Sodium/pantothenate symporter PAJ_RS15590 IPR018212 Sodium/solute symporter, conserved site PAJ_RS15595 IPR004498 Ribosomal protein L11 methyltransferase PAJ_RS15595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS15600 IPR001269 tRNA-dihydrouridine synthase PAJ_RS15600 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 PAJ_RS15600 IPR013785 Aldolase-type TIM barrel PAJ_RS15600 IPR018517 tRNA-dihydrouridine synthase, conserved site PAJ_RS15600 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal PAJ_RS15600 IPR032887 PAJ_RS15600 PAJ_RS15605 IPR002197 DNA binding HTH domain, Fis-type PAJ_RS15605 IPR005412 DNA-binding protein Fis PAJ_RS15605 IPR009057 Homeodomain-like PAJ_RS15610 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS15610 IPR018313 Extracellular solute-binding protein, family 3, conserved site PAJ_RS15615 IPR000515 MetI-like domain PAJ_RS15615 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS15620 IPR000515 MetI-like domain PAJ_RS15620 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family PAJ_RS15625 IPR003439 ABC transporter-like PAJ_RS15625 IPR003593 AAA+ ATPase domain PAJ_RS15625 IPR017871 ABC transporter, conserved site PAJ_RS15625 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS15625 IPR030679 PAJ_RS15625 PAJ_RS15660 IPR001451 Bacterial transferase hexapeptide repeat PAJ_RS15660 IPR011004 Trimeric LpxA-like PAJ_RS15665 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PAJ_RS15665 IPR011342 Shikimate dehydrogenase PAJ_RS15665 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal PAJ_RS15665 IPR016040 NAD(P)-binding domain PAJ_RS15665 IPR022893 Shikimate, quinate/shikimate dehydrogenase PAJ_RS15670 IPR006070 YrdC-like domain PAJ_RS15670 IPR017945 DHBP synthase RibB-like alpha/beta domain PAJ_RS15670 IPR023535 Threonylcarbamoyl-AMP synthase PAJ_RS15675 IPR000380 DNA topoisomerase, type IA PAJ_RS15675 IPR013498 DNA topoisomerase, type IA, zn finger PAJ_RS15680 IPR007456 Protein of unknown function DUF494 PAJ_RS15685 IPR003488 DNA recombination-mediator protein A PAJ_RS15690 IPR000181 Formylmethionine deformylase PAJ_RS15690 IPR023635 Peptide deformylase PAJ_RS15695 IPR001555 Phosphoribosylglycinamide formyltransferase, active site PAJ_RS15695 IPR002376 Formyl transferase, N-terminal PAJ_RS15695 IPR005793 Formyl transferase, C-terminal PAJ_RS15695 IPR005794 Methionyl-tRNA formyltransferase PAJ_RS15695 IPR011034 Formyl transferase, C-terminal-like PAJ_RS15700 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p PAJ_RS15700 IPR004573 rRNA small subunit methyltransferase B PAJ_RS15700 IPR006027 NusB/RsmB/TIM44 PAJ_RS15700 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site PAJ_RS15700 IPR023267 RNA (C5-cytosine) methyltransferase PAJ_RS15700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS15705 IPR003148 Regulator of K+ conductance, N-terminal PAJ_RS15705 IPR006036 Potassium uptake protein TrkA PAJ_RS15705 IPR006037 Regulator of K+ conductance, C-terminal PAJ_RS15705 IPR016040 NAD(P)-binding domain PAJ_RS15710 IPR001185 Large-conductance mechanosensitive channel PAJ_RS15710 IPR019823 Large-conductance mechanosensitive channel, conserved site PAJ_RS15715 IPR005589 Protein of unknown function DUF331 PAJ_RS15720 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain PAJ_RS15725 IPR000456 Ribosomal protein L17 PAJ_RS15730 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain PAJ_RS15730 IPR011260 RNA polymerase, alpha subunit, C-terminal PAJ_RS15730 IPR011262 DNA-directed RNA polymerase, insert domain PAJ_RS15730 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type PAJ_RS15730 IPR011773 DNA-directed RNA polymerase, alpha subunit PAJ_RS15740 IPR001971 Ribosomal protein S11 PAJ_RS15740 IPR018102 Ribosomal S11, conserved site PAJ_RS15740 IPR019981 Ribosomal protein S11, bacterial-type PAJ_RS15745 IPR001892 Ribosomal protein S13 PAJ_RS15745 IPR010979 Ribosomal protein S13-like, H2TH PAJ_RS15745 IPR018269 Ribosomal protein S13, conserved site PAJ_RS15745 IPR019980 Ribosomal protein S13, bacterial-type PAJ_RS15745 IPR027437 30s ribosomal protein S13, C-terminal PAJ_RS15750 IPR000473 Ribosomal protein L36 PAJ_RS15755 IPR002208 SecY/SEC61-alpha family PAJ_RS15755 IPR023201 SecY subunit domain PAJ_RS15755 IPR026593 Protein translocase subunit SecY PAJ_RS15755 IPR030659 PAJ_RS15755 PAJ_RS15760 IPR001196 Ribosomal protein L15, conserved site PAJ_RS15760 IPR005749 Ribosomal protein L15, bacterial-type PAJ_RS15760 IPR021131 Ribosomal protein L18e/L15P PAJ_RS15760 IPR030878 PAJ_RS15760 PAJ_RS15765 IPR005996 Ribosomal protein L30, bacterial-type PAJ_RS15765 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PAJ_RS15765 IPR018038 Ribosomal protein L30, conserved site PAJ_RS15770 IPR000851 Ribosomal protein S5 PAJ_RS15770 IPR005324 Ribosomal protein S5, C-terminal PAJ_RS15770 IPR005712 Ribosomal protein S5, bacterial-type PAJ_RS15770 IPR013810 Ribosomal protein S5, N-terminal PAJ_RS15770 IPR014720 Double-stranded RNA-binding domain PAJ_RS15770 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAJ_RS15770 IPR018192 Ribosomal protein S5, N-terminal, conserved site PAJ_RS15770 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS15775 IPR004389 Ribosomal protein L18, bacterial-type PAJ_RS15775 IPR005484 Ribosomal protein L18/L5 PAJ_RS15780 IPR000702 Ribosomal protein L6 PAJ_RS15780 IPR002358 Ribosomal protein L6, conserved site PAJ_RS15780 IPR019906 Ribosomal protein L6, bacterial-type PAJ_RS15780 IPR020040 Ribosomal protein L6, alpha-beta domain PAJ_RS15785 IPR000630 Ribosomal protein S8 PAJ_RS15790 IPR001209 Ribosomal protein S14 PAJ_RS15790 IPR018271 Ribosomal protein S14, conserved site PAJ_RS15790 IPR023036 Ribosomal protein S14, bacterial/plastid PAJ_RS15795 IPR002132 Ribosomal protein L5 PAJ_RS15795 IPR020929 Ribosomal protein L5, conserved site PAJ_RS15795 IPR020930 Ribosomal protein L5, bacterial-type PAJ_RS15795 IPR022803 Ribosomal protein L5 domain PAJ_RS15795 IPR031309 PAJ_RS15795 PAJ_RS15795 IPR031310 PAJ_RS15795 PAJ_RS15800 IPR003256 Ribosomal protein L24 PAJ_RS15800 IPR005824 KOW PAJ_RS15800 IPR005825 Ribosomal protein L24/L26, conserved site PAJ_RS15800 IPR008991 Translation protein SH3-like domain PAJ_RS15800 IPR014722 Ribosomal protein L2 domain 2 PAJ_RS15805 IPR000218 Ribosomal protein L14b/L23e PAJ_RS15805 IPR005745 Ribosomal protein L14, bacterial-type PAJ_RS15805 IPR019972 Ribosomal protein L14 conserved site PAJ_RS15810 IPR000266 Ribosomal protein S17 PAJ_RS15810 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS15810 IPR019979 Ribosomal protein S17, conserved site PAJ_RS15810 IPR019984 Ribosomal protein S17, bacterial-type PAJ_RS15815 IPR001854 Ribosomal protein L29 PAJ_RS15815 IPR018254 Ribosomal protein L29, conserved site PAJ_RS15820 IPR000114 Ribosomal protein L16 PAJ_RS15820 IPR016180 Ribosomal protein L10e/L16 PAJ_RS15820 IPR020798 Ribosomal protein L16, conserved site PAJ_RS15825 IPR001351 Ribosomal protein S3, C-terminal PAJ_RS15825 IPR004044 K Homology domain, type 2 PAJ_RS15825 IPR004087 K Homology domain PAJ_RS15825 IPR005704 Ribosomal protein S3, bacterial PAJ_RS15825 IPR009019 K homology domain, prokaryotic type PAJ_RS15825 IPR015946 K homology domain-like, alpha/beta PAJ_RS15825 IPR018280 Ribosomal protein S3, conserved site PAJ_RS15830 IPR001063 Ribosomal protein L22/L17 PAJ_RS15830 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type PAJ_RS15830 IPR018260 Ribosomal protein L22/L17, conserved site PAJ_RS15835 IPR002222 Ribosomal protein S19/S15 PAJ_RS15835 IPR005732 Ribosomal protein S19, bacterial-type PAJ_RS15835 IPR020934 Ribosomal protein S19 conserved site PAJ_RS15835 IPR023575 Ribosomal protein S19, superfamily PAJ_RS15840 IPR002171 Ribosomal protein L2 PAJ_RS15840 IPR005880 Ribosomal protein L2, bacterial/organellar-type PAJ_RS15840 IPR008991 Translation protein SH3-like domain PAJ_RS15840 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS15840 IPR014722 Ribosomal protein L2 domain 2 PAJ_RS15840 IPR014726 Ribosomal protein L2, domain 3 PAJ_RS15840 IPR022666 Ribosomal Proteins L2, RNA binding domain PAJ_RS15840 IPR022669 Ribosomal protein L2, C-terminal PAJ_RS15840 IPR022671 Ribosomal protein L2, conserved site PAJ_RS15845 IPR001014 Ribosomal protein L23/L25, conserved site PAJ_RS15845 IPR012677 Nucleotide-binding, alpha-beta plait PAJ_RS15845 IPR012678 Ribosomal protein L23/L15e core domain PAJ_RS15845 IPR013025 Ribosomal protein L25/L23 PAJ_RS15850 IPR002136 Ribosomal protein L4/L1e PAJ_RS15850 IPR013005 Ribosomal protein L4/L1e, bacterial-type PAJ_RS15850 IPR023574 Ribosomal protein L4 domain PAJ_RS15855 IPR000597 Ribosomal protein L3 PAJ_RS15855 IPR009000 Translation protein, beta-barrel domain PAJ_RS15855 IPR019926 Ribosomal protein L3, conserved site PAJ_RS15855 IPR019927 Ribosomal protein L3, bacterial/organelle-type PAJ_RS15860 IPR001848 Ribosomal protein S10 PAJ_RS15860 IPR018268 Ribosomal protein S10, conserved site PAJ_RS15860 IPR027486 Ribosomal protein S10 domain PAJ_RS15865 IPR000045 Prepilin type IV endopeptidase, peptidase domain PAJ_RS15865 IPR010627 Peptidase A24A, N-terminal PAJ_RS15865 IPR014032 Peptidase A24A, prepilin type IV, bacterial PAJ_RS15870 IPR002024 Bacterioferritin PAJ_RS15870 IPR008331 Ferritin/DPS protein domain PAJ_RS15870 IPR009078 Ferritin-like superfamily PAJ_RS15870 IPR012347 Ferritin-related PAJ_RS15880 IPR000795 Elongation factor, GTP-binding domain PAJ_RS15880 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PAJ_RS15880 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 PAJ_RS15880 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle PAJ_RS15880 IPR005225 Small GTP-binding protein domain PAJ_RS15880 IPR009000 Translation protein, beta-barrel domain PAJ_RS15880 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PAJ_RS15880 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS15880 IPR031157 PAJ_RS15880 PAJ_RS15885 IPR000640 Translation elongation factor EFG, V domain PAJ_RS15885 IPR000795 Elongation factor, GTP-binding domain PAJ_RS15885 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 PAJ_RS15885 IPR004540 Translation elongation factor EFG/EF2 PAJ_RS15885 IPR005225 Small GTP-binding protein domain PAJ_RS15885 IPR005517 Translation elongation factor EFG/EF2, domain IV PAJ_RS15885 IPR009000 Translation protein, beta-barrel domain PAJ_RS15885 IPR009022 Elongation factor G, III-V domain PAJ_RS15885 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAJ_RS15885 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS15885 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS15885 IPR031157 PAJ_RS15885 PAJ_RS15890 IPR000235 Ribosomal protein S5/S7 PAJ_RS15890 IPR005717 Ribosomal protein S7, bacterial/organellar-type PAJ_RS15890 IPR020606 Ribosomal protein S7, conserved site PAJ_RS15890 IPR023798 Ribosomal protein S7 domain PAJ_RS15895 IPR005679 Ribosomal protein S12, bacteria PAJ_RS15895 IPR006032 Ribosomal protein S12/S23 PAJ_RS15895 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS15900 IPR007215 Sulphur relay, TusB/DsrH PAJ_RS15900 IPR023526 Sulphur relay, TusB PAJ_RS15900 IPR027396 DsrEFH-like PAJ_RS15905 IPR003787 Sulphur relay, DsrE/F-like protein PAJ_RS15905 IPR017462 Sulphur relay, TusC/DsrF PAJ_RS15905 IPR027396 DsrEFH-like PAJ_RS15910 IPR003787 Sulphur relay, DsrE/F-like protein PAJ_RS15910 IPR017463 Sulphur relay, TusD/DsrE PAJ_RS15910 IPR027396 DsrEFH-like PAJ_RS15915 IPR013559 YheO-like PAJ_RS15920 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal PAJ_RS15920 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain PAJ_RS15920 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PAJ_RS15925 IPR007236 SlyX PAJ_RS15930 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain PAJ_RS15930 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type PAJ_RS15935 IPR012658 Conserved hypothetical protein CHP02443 PAJ_RS15935 IPR013088 Zinc finger, NHR/GATA-type PAJ_RS15940 IPR003148 Regulator of K+ conductance, N-terminal PAJ_RS15940 IPR004771 K+/H+ exchanger PAJ_RS15940 IPR006153 Cation/H+ exchanger PAJ_RS15940 IPR016040 NAD(P)-binding domain PAJ_RS15940 IPR020884 Glutathione-regulated potassium-efflux system protein KefB PAJ_RS15945 IPR003680 Flavodoxin-like fold PAJ_RS15945 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG PAJ_RS15945 IPR029039 Flavoprotein-like PAJ_RS15950 IPR003439 ABC transporter-like PAJ_RS15950 IPR003593 AAA+ ATPase domain PAJ_RS15950 IPR017871 ABC transporter, conserved site PAJ_RS15950 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS15950 IPR032781 PAJ_RS15950 PAJ_RS15955 IPR003819 Taurine catabolism dioxygenase TauD/TfdA PAJ_RS15960 IPR000515 MetI-like domain PAJ_RS15965 IPR003439 ABC transporter-like PAJ_RS15965 IPR003593 AAA+ ATPase domain PAJ_RS15965 IPR017871 ABC transporter, conserved site PAJ_RS15965 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS15970 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS15970 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain PAJ_RS15970 IPR010068 Taurine ABC transporter, periplasmic binding protein TauA PAJ_RS15975 IPR000843 Transcription regulator HTH, LacI PAJ_RS15975 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS15975 IPR028082 Periplasmic binding protein-like I PAJ_RS15980 IPR001123 Lysine-type exporter protein (LYSE/YGGA) PAJ_RS15985 IPR000073 Alpha/beta hydrolase fold-1 PAJ_RS15985 IPR000952 Uncharacterised protein family UPF0017, hydrolase-like, conserved site PAJ_RS15985 IPR012020 AB-hydrolase YheT, putative PAJ_RS15985 IPR029058 Alpha/Beta hydrolase fold PAJ_RS15990 IPR010648 Uncharacterised protein family UPF0270 PAJ_RS15995 IPR006082 Phosphoribulokinase PAJ_RS15995 IPR006083 Phosphoribulokinase/uridine kinase PAJ_RS15995 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS16000 IPR003718 OsmC/Ohr family PAJ_RS16000 IPR015946 K homology domain-like, alpha/beta PAJ_RS16005 IPR000595 Cyclic nucleotide-binding domain PAJ_RS16005 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS16005 IPR012318 Helix-turn-helix motif, Crp-type PAJ_RS16005 IPR014710 RmlC-like jelly roll fold PAJ_RS16005 IPR018335 Transcription regulator HTH, Crp-type, conserved site PAJ_RS16005 IPR018488 Cyclic nucleotide-binding, conserved site PAJ_RS16005 IPR018490 Cyclic nucleotide-binding-like PAJ_RS16010 IPR010020 Integral membrane protein, YccS/YhfK PAJ_RS16010 IPR032692 PAJ_RS16010 PAJ_RS16015 IPR004636 Acetylornithine/Succinylornithine transaminase family PAJ_RS16015 IPR005814 Aminotransferase class-III PAJ_RS16015 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS16015 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS16015 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS16015 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria PAJ_RS16020 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain PAJ_RS16020 IPR017926 Glutamine amidotransferase PAJ_RS16020 IPR029062 Class I glutamine amidotransferase-like PAJ_RS16025 IPR003812 Fido domain PAJ_RS16030 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain PAJ_RS16030 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site PAJ_RS16030 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase PAJ_RS16030 IPR029000 Cyclophilin-like domain PAJ_RS16035 IPR011701 Major facilitator superfamily PAJ_RS16035 IPR020846 Major facilitator superfamily domain PAJ_RS16035 IPR023528 Major facilitator superfamily transporter, TsgA PAJ_RS16040 IPR011059 Metal-dependent hydrolase, composite domain PAJ_RS16040 IPR013108 Amidohydrolase 3 PAJ_RS16040 IPR032466 PAJ_RS16040 PAJ_RS16045 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PAJ_RS16045 IPR002305 Aminoacyl-tRNA synthetase, class Ic PAJ_RS16045 IPR002306 Tryptophan-tRNA ligase PAJ_RS16045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS16045 IPR024109 Tryptophan-tRNA ligase, bacterial-type PAJ_RS16050 IPR006346 2-phosphoglycolate phosphatase, prokaryotic PAJ_RS16050 IPR006439 HAD hydrolase, subfamily IA PAJ_RS16050 IPR023198 Phosphoglycolate phosphatase, domain 2 PAJ_RS16050 IPR023214 HAD-like domain PAJ_RS16055 IPR000056 Ribulose-phosphate 3-epimerase-like PAJ_RS16055 IPR011060 Ribulose-phosphate binding barrel PAJ_RS16055 IPR013785 Aldolase-type TIM barrel PAJ_RS16055 IPR026019 Ribulose-phosphate 3-epimerase PAJ_RS16060 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PAJ_RS16060 IPR012263 Adenine modification methylase, M.EcoRV-type PAJ_RS16060 IPR012327 D12 class N6 adenine-specific DNA methyltransferase PAJ_RS16060 IPR023095 Adenine-specific methyltransferase, domain 2 PAJ_RS16060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS16065 IPR007730 Sporulation-related domain PAJ_RS16065 IPR032899 PAJ_RS16065 PAJ_RS16070 IPR016037 3-dehydroquinate synthase AroB PAJ_RS16070 IPR030960 PAJ_RS16070 PAJ_RS16070 IPR030963 PAJ_RS16070 PAJ_RS16075 IPR000623 Shikimate kinase/Threonine synthase-like 1 PAJ_RS16075 IPR023000 Shikimate kinase, conserved site PAJ_RS16075 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS16075 IPR031322 PAJ_RS16075 PAJ_RS16080 IPR001775 GspD/PilQ family PAJ_RS16080 IPR004845 Type II secretion system GspD, conserved site PAJ_RS16080 IPR004846 Type II/III secretion system PAJ_RS16080 IPR005644 NolW-like PAJ_RS16080 IPR011662 Secretin/TonB, short N-terminal PAJ_RS16080 IPR013355 Type IV pilus secretin PilQ PAJ_RS16085 IPR019684 Protein of unknown function DUF2531 PAJ_RS16095 IPR007813 Fimbrial assembly PilN PAJ_RS16100 IPR005883 Type IV pilus assembly protein PilM PAJ_RS16105 IPR001264 Glycosyl transferase, family 51 PAJ_RS16105 IPR001460 Penicillin-binding protein, transpeptidase PAJ_RS16105 IPR012338 Beta-lactamase/transpeptidase-like PAJ_RS16105 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS16105 IPR023346 Lysozyme-like domain PAJ_RS16105 IPR031376 PAJ_RS16105 PAJ_RS16110 IPR000086 NUDIX hydrolase domain PAJ_RS16110 IPR015797 NUDIX hydrolase domain-like PAJ_RS16110 IPR020084 NUDIX hydrolase, conserved site PAJ_RS16115 IPR010771 Intracellular growth attenuator IgaA PAJ_RS16120 IPR006439 HAD hydrolase, subfamily IA PAJ_RS16120 IPR023214 HAD-like domain PAJ_RS16125 IPR002942 RNA-binding S4 domain PAJ_RS16125 IPR025708 Heat shock protein 15 PAJ_RS16130 IPR000397 Heat shock protein Hsp33 PAJ_RS16130 IPR016153 Heat shock protein Hsp33, N-terminal PAJ_RS16130 IPR016154 Heat shock protein Hsp33, C-terminal PAJ_RS16130 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain PAJ_RS16135 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising PAJ_RS16135 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal PAJ_RS16135 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal PAJ_RS16135 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site PAJ_RS16140 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS16140 IPR003660 HAMP linker domain PAJ_RS16140 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS16140 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS16145 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS16145 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS16145 IPR011006 CheY-like superfamily PAJ_RS16145 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS16145 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS16150 IPR025858 Exopolysaccharide production protein YjbE PAJ_RS16155 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal PAJ_RS16155 IPR006358 Transcription elongation factor GreB PAJ_RS16155 IPR018151 Transcription elongation factor, GreA/GreB, conserved site PAJ_RS16155 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal PAJ_RS16155 IPR023459 Transcription elongation factor GreA/GreB family PAJ_RS16155 IPR028624 Transcription elongation factor GreA/GreB PAJ_RS16160 IPR003029 Ribosomal protein S1, RNA-binding domain PAJ_RS16160 IPR006641 YqgF/RNase H-like domain PAJ_RS16160 IPR010994 RuvA domain 2-like PAJ_RS16160 IPR012337 Ribonuclease H-like domain PAJ_RS16160 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS16160 IPR018974 Tex-like protein, N-terminal PAJ_RS16160 IPR022967 RNA-binding domain, S1 PAJ_RS16160 IPR023097 Tex RuvX-like domain PAJ_RS16160 IPR023319 Tex-like protein, HTH domain PAJ_RS16160 IPR023323 Tex-like domain PAJ_RS16160 IPR032639 PAJ_RS16160 PAJ_RS16165 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PAJ_RS16165 IPR013780 Glycosyl hydrolase, family 13, all-beta PAJ_RS16165 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS16165 IPR015902 Glycoside hydrolase, family 13 PAJ_RS16165 IPR016377 Sucrose phosphorylase PAJ_RS16165 IPR017853 Glycoside hydrolase, superfamily PAJ_RS16170 IPR010854 Domain of unknown function DUF1471 PAJ_RS16170 IPR025543 Dodecin-like PAJ_RS16175 IPR000073 Alpha/beta hydrolase fold-1 PAJ_RS16175 IPR010076 Pimelyl-[acyl-carrier protein] methyl ester esterase PAJ_RS16175 IPR029058 Alpha/Beta hydrolase fold PAJ_RS16180 IPR000836 Phosphoribosyltransferase domain PAJ_RS16180 IPR029057 Phosphoribosyltransferase-like PAJ_RS16185 IPR000361 FeS cluster biogenesis PAJ_RS16185 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal PAJ_RS16185 IPR017726 Fe/S biogenesis protein NfuA PAJ_RS16190 IPR003385 Glycoside hydrolase, family 77 PAJ_RS16190 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS16190 IPR017853 Glycoside hydrolase, superfamily PAJ_RS16195 IPR000811 Glycosyl transferase, family 35 PAJ_RS16195 IPR011833 Glycogen/starch/alpha-glucan phosphorylase PAJ_RS16200 IPR001034 HTH DeoR N-terminal domain PAJ_RS16200 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS16200 IPR014036 DeoR C-terminal sensor domain PAJ_RS16200 IPR018356 Transcription regulator, HTH DeoR-type, conserved site PAJ_RS16205 IPR002610 Peptidase S54, rhomboid PAJ_RS16205 IPR022732 Peptidase S54, GlpG peptidase, N-terminal PAJ_RS16205 IPR022764 Peptidase S54, rhomboid domain PAJ_RS16205 IPR023662 Rhomboid protease GlpG PAJ_RS16210 IPR001763 Rhodanese-like domain PAJ_RS16210 IPR023695 Thiosulfate sulfurtransferase, bacterial PAJ_RS16215 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase PAJ_RS16215 IPR006076 FAD dependent oxidoreductase PAJ_RS16215 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS16215 IPR031656 PAJ_RS16215 PAJ_RS16225 IPR000811 Glycosyl transferase, family 35 PAJ_RS16225 IPR011833 Glycogen/starch/alpha-glucan phosphorylase PAJ_RS16230 IPR001296 Glycosyl transferase, family 1 PAJ_RS16230 IPR011835 Glycogen/starch synthase, ADP-glucose type PAJ_RS16230 IPR013534 Starch synthase, catalytic domain PAJ_RS16235 IPR005835 Nucleotidyl transferase PAJ_RS16235 IPR005836 ADP-glucose pyrophosphorylase, conserved site PAJ_RS16235 IPR011004 Trimeric LpxA-like PAJ_RS16235 IPR011831 Glucose-1-phosphate adenylyltransferase PAJ_RS16235 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial PAJ_RS16235 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS16240 IPR004193 Glycoside hydrolase, family 13, N-terminal PAJ_RS16240 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PAJ_RS16240 IPR011837 Glycogen debranching enzyme, GlgX type PAJ_RS16240 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS16240 IPR013783 Immunoglobulin-like fold PAJ_RS16240 IPR014756 Immunoglobulin E-set PAJ_RS16240 IPR015902 Glycoside hydrolase, family 13 PAJ_RS16240 IPR017853 Glycoside hydrolase, superfamily PAJ_RS16240 IPR022844 Glycogen debranching enzyme, bacterial PAJ_RS16245 IPR004193 Glycoside hydrolase, family 13, N-terminal PAJ_RS16245 IPR006047 Glycosyl hydrolase, family 13, catalytic domain PAJ_RS16245 IPR006048 Alpha-amylase, C-terminal all beta PAJ_RS16245 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB PAJ_RS16245 IPR013780 Glycosyl hydrolase, family 13, all-beta PAJ_RS16245 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS16245 IPR013783 Immunoglobulin-like fold PAJ_RS16245 IPR014756 Immunoglobulin E-set PAJ_RS16245 IPR015902 Glycoside hydrolase, family 13 PAJ_RS16245 IPR017853 Glycoside hydrolase, superfamily PAJ_RS16250 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site PAJ_RS16250 IPR000534 Semialdehyde dehydrogenase, NAD-binding PAJ_RS16250 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type PAJ_RS16250 IPR012080 Aspartate-semialdehyde dehydrogenase PAJ_RS16250 IPR012280 Semialdehyde dehydrogenase, dimerisation domain PAJ_RS16250 IPR016040 NAD(P)-binding domain PAJ_RS16255 IPR002771 Multiple antibiotic resistance (MarC)-related PAJ_RS16260 IPR003474 Gluconate transporter PAJ_RS16265 IPR006001 Carbohydrate kinase, thermoresistant glucokinase PAJ_RS16265 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS16265 IPR031322 PAJ_RS16265 PAJ_RS16270 IPR000843 Transcription regulator HTH, LacI PAJ_RS16270 IPR001761 Periplasmic binding protein/LacI sugar binding domain PAJ_RS16270 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS16270 IPR028082 Periplasmic binding protein-like I PAJ_RS16275 IPR003829 Pirin, N-terminal domain PAJ_RS16275 IPR011051 RmlC-like cupin domain PAJ_RS16275 IPR012093 Pirin PAJ_RS16275 IPR014710 RmlC-like jelly roll fold PAJ_RS16280 IPR000182 GNAT domain PAJ_RS16280 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS16285 IPR000101 Gamma-glutamyltranspeptidase PAJ_RS16285 IPR029055 Nucleophile aminohydrolases, N-terminal PAJ_RS16290 IPR020158 Protein of unknown function DUF2756 PAJ_RS16295 IPR004129 Glycerophosphoryl diester phosphodiesterase PAJ_RS16295 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain PAJ_RS16295 IPR030395 PAJ_RS16295 PAJ_RS16300 IPR003439 ABC transporter-like PAJ_RS16300 IPR003593 AAA+ ATPase domain PAJ_RS16300 IPR008995 Molybdate/tungstate binding, C-terminal PAJ_RS16300 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS16300 IPR013611 Transport-associated OB, type 2 PAJ_RS16300 IPR017871 ABC transporter, conserved site PAJ_RS16300 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS16305 IPR000515 MetI-like domain PAJ_RS16305 IPR030165 PAJ_RS16305 PAJ_RS16310 IPR000515 MetI-like domain PAJ_RS16315 IPR006061 Bacterial extracellular solute-binding family 1, conserved site PAJ_RS16320 IPR003439 ABC transporter-like PAJ_RS16320 IPR003593 AAA+ ATPase domain PAJ_RS16320 IPR017871 ABC transporter, conserved site PAJ_RS16320 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS16320 IPR030660 PAJ_RS16320 PAJ_RS16325 IPR003439 ABC transporter-like PAJ_RS16325 IPR003593 AAA+ ATPase domain PAJ_RS16325 IPR017871 ABC transporter, conserved site PAJ_RS16325 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS16325 IPR032823 PAJ_RS16325 PAJ_RS16330 IPR001851 ABC transporter, permease PAJ_RS16330 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal PAJ_RS16335 IPR001851 ABC transporter, permease PAJ_RS16340 IPR000709 Leu/Ile/Val-binding protein PAJ_RS16340 IPR028081 Leucine-binding protein domain PAJ_RS16340 IPR028082 Periplasmic binding protein-like I PAJ_RS16350 IPR000182 GNAT domain PAJ_RS16350 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS16350 IPR032900 PAJ_RS16350 PAJ_RS16355 IPR000943 RNA polymerase sigma-70 PAJ_RS16355 IPR007627 RNA polymerase sigma-70 region 2 PAJ_RS16355 IPR007630 RNA polymerase sigma-70 region 4 PAJ_RS16355 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS16355 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria PAJ_RS16355 IPR013324 RNA polymerase sigma factor, region 3/4 PAJ_RS16355 IPR013325 RNA polymerase sigma factor, region 2 PAJ_RS16355 IPR014284 RNA polymerase sigma-70 like domain PAJ_RS16355 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE PAJ_RS16360 IPR003838 Permease FtsX-like PAJ_RS16360 IPR004513 ABC transporter, cell division protein FtsX PAJ_RS16365 IPR003439 ABC transporter-like PAJ_RS16365 IPR003593 AAA+ ATPase domain PAJ_RS16365 IPR005286 Cell division protein FtsE, ATP-binding PAJ_RS16365 IPR017871 ABC transporter, conserved site PAJ_RS16365 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS16370 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain PAJ_RS16370 IPR003593 AAA+ ATPase domain PAJ_RS16370 IPR004390 Signal-recognition particle receptor FtsY PAJ_RS16370 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle PAJ_RS16370 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS16375 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PAJ_RS16375 IPR004398 RNA methyltransferase, RsmD PAJ_RS16375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS16380 IPR009525 Protein of unknown function DUF1145 PAJ_RS16385 IPR019635 Protein of unknown function DUF2500 PAJ_RS16390 IPR012506 YhhN-like PAJ_RS16395 IPR001757 Cation-transporting P-type ATPase PAJ_RS16395 IPR006121 Heavy metal-associated domain, HMA PAJ_RS16395 IPR008250 P-type ATPase, A domain PAJ_RS16395 IPR017969 Heavy-metal-associated, conserved site PAJ_RS16395 IPR018303 P-type ATPase, phosphorylation site PAJ_RS16395 IPR023214 HAD-like domain PAJ_RS16395 IPR023299 P-type ATPase, cytoplasmic domain N PAJ_RS16395 IPR027256 Cation-transporting P-type ATPase, subfamily IB PAJ_RS16400 IPR001455 TusA-like domain PAJ_RS16400 IPR022931 Sulphurtransferase TusA PAJ_RS16405 IPR003744 Protein of unknown function DUF165 PAJ_RS16410 IPR014894 Protein DcrB PAJ_RS16410 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich PAJ_RS16415 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PAJ_RS16415 IPR011611 Carbohydrate kinase PfkB PAJ_RS16415 IPR018659 Protein of unknown function DUF2090 PAJ_RS16415 IPR029056 Ribokinase-like PAJ_RS16415 IPR030830 PAJ_RS16415 PAJ_RS16420 IPR000399 TPP-binding enzyme, conserved site PAJ_RS16420 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding PAJ_RS16420 IPR012000 Thiamine pyrophosphate enzyme, central domain PAJ_RS16420 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain PAJ_RS16420 IPR029035 DHS-like NAD/FAD-binding domain PAJ_RS16420 IPR029061 Thiamin diphosphate-binding fold PAJ_RS16420 IPR030817 PAJ_RS16420 PAJ_RS16425 IPR000683 Oxidoreductase, N-terminal PAJ_RS16425 IPR004104 Oxidoreductase, C-terminal PAJ_RS16425 IPR016040 NAD(P)-binding domain PAJ_RS16425 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase PAJ_RS16430 IPR013022 Xylose isomerase-like, TIM barrel domain PAJ_RS16430 IPR023952 Inosose dehydratase PAJ_RS16430 IPR030823 PAJ_RS16430 PAJ_RS16435 IPR000281 Helix-turn-helix protein RpiR PAJ_RS16435 IPR001347 Sugar isomerase (SIS) PAJ_RS16435 IPR009057 Homeodomain-like PAJ_RS16435 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS16440 IPR011051 RmlC-like cupin domain PAJ_RS16440 IPR014710 RmlC-like jelly roll fold PAJ_RS16440 IPR021120 KduI/IolB isomerase PAJ_RS16440 IPR024203 5-deoxy-glucuronate isomerase, IolB PAJ_RS16445 IPR010061 Methylmalonate-semialdehyde dehydrogenase PAJ_RS16445 IPR015590 Aldehyde dehydrogenase domain PAJ_RS16445 IPR016161 Aldehyde/histidinol dehydrogenase PAJ_RS16445 IPR016162 Aldehyde dehydrogenase, N-terminal PAJ_RS16445 IPR016163 Aldehyde dehydrogenase, C-terminal PAJ_RS16450 IPR006042 Xanthine/uracil permease PAJ_RS16450 IPR006043 Xanthine/uracil/vitamin C permease PAJ_RS16450 IPR017588 Xanthine permease PAJ_RS16455 IPR002549 Uncharacterised protein family UPF0118 PAJ_RS16460 IPR000524 Transcription regulator HTH, GntR PAJ_RS16460 IPR008920 Transcription regulator FadR/GntR, C-terminal PAJ_RS16460 IPR011711 GntR, C-terminal PAJ_RS16460 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS16465 IPR004628 Mannonate dehydratase PAJ_RS16465 IPR013022 Xylose isomerase-like, TIM barrel domain PAJ_RS16470 IPR001633 EAL domain PAJ_RS16470 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain PAJ_RS16480 IPR004736 Citrate-proton symport PAJ_RS16480 IPR005828 General substrate transporter PAJ_RS16480 IPR005829 Sugar transporter, conserved site PAJ_RS16480 IPR015041 Osmosensory transporter coiled coil PAJ_RS16480 IPR020846 Major facilitator superfamily domain PAJ_RS16485 IPR001731 Porphobilinogen synthase PAJ_RS16485 IPR013785 Aldolase-type TIM barrel PAJ_RS16485 IPR030656 PAJ_RS16485 PAJ_RS16490 IPR009057 Homeodomain-like PAJ_RS16490 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS16495 IPR003828 Protein of unknown function DUF208 PAJ_RS16500 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS16500 IPR016040 NAD(P)-binding domain PAJ_RS16500 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS16515 IPR000281 Helix-turn-helix protein RpiR PAJ_RS16515 IPR009057 Homeodomain-like PAJ_RS16515 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS16520 IPR000755 Peptidase M15D, VanX D-ala-D-ala dipeptidase PAJ_RS16520 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain PAJ_RS16525 IPR000914 Bacterial extracellular solute-binding protein, family 5 PAJ_RS16525 IPR030678 PAJ_RS16525 PAJ_RS16530 IPR000515 MetI-like domain PAJ_RS16535 IPR000515 MetI-like domain PAJ_RS16535 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PAJ_RS16540 IPR003439 ABC transporter-like PAJ_RS16540 IPR003593 AAA+ ATPase domain PAJ_RS16540 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PAJ_RS16540 IPR017871 ABC transporter, conserved site PAJ_RS16540 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS16545 IPR003439 ABC transporter-like PAJ_RS16545 IPR003593 AAA+ ATPase domain PAJ_RS16545 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PAJ_RS16545 IPR017871 ABC transporter, conserved site PAJ_RS16545 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS16550 IPR006076 FAD dependent oxidoreductase PAJ_RS16550 IPR023080 D-amino acid dehydrogenase small subunit, DadA PAJ_RS16550 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS16555 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like PAJ_RS16555 IPR023166 HI0933 insert-like domain PAJ_RS16555 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS16560 IPR001204 Phosphate transporter PAJ_RS16565 IPR019598 Universal stress protein B PAJ_RS16570 IPR006015 Universal stress protein A PAJ_RS16570 IPR006016 UspA PAJ_RS16570 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS16575 IPR007536 Ribosomal RNA small subunit methyltransferase J PAJ_RS16575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS16580 IPR001567 Peptidase M3A/M3B PAJ_RS16580 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 PAJ_RS16580 IPR024079 Metallopeptidase, catalytic domain PAJ_RS16580 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal PAJ_RS16585 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PAJ_RS16585 IPR007473 Ribosomal RNA large subunit methyltransferase J PAJ_RS16585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS16590 IPR003675 CAAX amino terminal protease PAJ_RS16595 IPR001279 Beta-lactamase-like PAJ_RS16595 IPR013471 Ribonuclease Z/BN PAJ_RS16600 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PAJ_RS16600 IPR006322 Glutathione reductase, eukaryote/bacterial PAJ_RS16600 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site PAJ_RS16600 IPR016156 FAD/NAD-linked reductase, dimerisation domain PAJ_RS16600 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS16605 IPR000600 ROK PAJ_RS16605 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS16610 IPR000760 Inositol monophosphatase PAJ_RS16610 IPR020583 Inositol monophosphatase, metal-binding site PAJ_RS16615 IPR003439 ABC transporter-like PAJ_RS16615 IPR003593 AAA+ ATPase domain PAJ_RS16615 IPR008995 Molybdate/tungstate binding, C-terminal PAJ_RS16615 IPR017871 ABC transporter, conserved site PAJ_RS16615 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS16620 IPR000515 MetI-like domain PAJ_RS16625 IPR000515 MetI-like domain PAJ_RS16635 IPR004129 Glycerophosphoryl diester phosphodiesterase PAJ_RS16635 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain PAJ_RS16635 IPR030395 PAJ_RS16635 PAJ_RS16640 IPR001702 Porin, Gram-negative type PAJ_RS16640 IPR001897 Porin, gammaproteobacterial PAJ_RS16640 IPR023614 Porin domain PAJ_RS16645 IPR029058 Alpha/Beta hydrolase fold PAJ_RS16655 IPR006153 Cation/H+ exchanger PAJ_RS16660 IPR011701 Major facilitator superfamily PAJ_RS16660 IPR020846 Major facilitator superfamily domain PAJ_RS16665 IPR000847 Transcription regulator HTH, LysR PAJ_RS16665 IPR005119 LysR, substrate-binding PAJ_RS16665 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS16670 IPR005134 Uncharacterised protein family UPF0114 PAJ_RS16670 IPR020761 Uncharacterised protein family UPF0114, bacteria PAJ_RS16670 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria PAJ_RS16680 IPR003820 Potassium-transporting ATPase C chain PAJ_RS16685 IPR001757 Cation-transporting P-type ATPase PAJ_RS16685 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA PAJ_RS16685 IPR008250 P-type ATPase, A domain PAJ_RS16685 IPR018303 P-type ATPase, phosphorylation site PAJ_RS16685 IPR023214 HAD-like domain PAJ_RS16685 IPR023299 P-type ATPase, cytoplasmic domain N PAJ_RS16690 IPR004623 Potassium-transporting ATPase A chain PAJ_RS16695 IPR011726 K+ transporting P-type ATPase, F subunit PAJ_RS16700 IPR003607 HD/PDEase domain PAJ_RS16700 IPR006674 HD domain PAJ_RS16700 IPR006675 Uncharacterised domain HDIG PAJ_RS16700 IPR021812 Protein of unknown function DUF3391 PAJ_RS16705 IPR000182 GNAT domain PAJ_RS16705 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS16710 IPR003439 ABC transporter-like PAJ_RS16710 IPR003593 AAA+ ATPase domain PAJ_RS16710 IPR011527 ABC transporter type 1, transmembrane domain PAJ_RS16710 IPR017871 ABC transporter, conserved site PAJ_RS16710 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS16715 IPR007434 Protein of unknown function DUF482 PAJ_RS16715 IPR013022 Xylose isomerase-like, TIM barrel domain PAJ_RS16715 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS16720 IPR003140 Phospholipase/carboxylesterase/thioesterase PAJ_RS16720 IPR029058 Alpha/Beta hydrolase fold PAJ_RS16725 IPR003691 Putative fluoride ion transporter CrcB PAJ_RS16735 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain PAJ_RS16735 IPR023186 Inosine/uridine-preferring nucleoside hydrolase PAJ_RS16740 IPR002085 Alcohol dehydrogenase superfamily, zinc-type PAJ_RS16740 IPR011032 GroES (chaperonin 10)-like PAJ_RS16740 IPR013149 Alcohol dehydrogenase, C-terminal PAJ_RS16740 IPR013154 Alcohol dehydrogenase GroES-like PAJ_RS16740 IPR016040 NAD(P)-binding domain PAJ_RS16740 IPR020843 Polyketide synthase, enoylreductase PAJ_RS16745 IPR000524 Transcription regulator HTH, GntR PAJ_RS16745 IPR008920 Transcription regulator FadR/GntR, C-terminal PAJ_RS16745 IPR011711 GntR, C-terminal PAJ_RS16745 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS16750 IPR000849 Sugar phosphate transporter PAJ_RS16750 IPR011701 Major facilitator superfamily PAJ_RS16750 IPR020846 Major facilitator superfamily domain PAJ_RS16760 IPR000073 Alpha/beta hydrolase fold-1 PAJ_RS16760 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal PAJ_RS16760 IPR029058 Alpha/Beta hydrolase fold PAJ_RS16765 IPR011234 Fumarylacetoacetase, C-terminal-related PAJ_RS16770 IPR003810 Domain of unknown function DUF204 PAJ_RS16770 IPR022929 Putative manganese efflux pump MntP PAJ_RS16775 IPR010590 Protein of unknown function DUF1158 PAJ_RS16780 IPR006231 Malate:quinone-oxidoreductase PAJ_RS16780 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS16785 IPR001123 Lysine-type exporter protein (LYSE/YGGA) PAJ_RS16790 IPR000524 Transcription regulator HTH, GntR PAJ_RS16790 IPR004839 Aminotransferase, class I/classII PAJ_RS16790 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS16790 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS16790 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS16795 IPR004045 Glutathione S-transferase, N-terminal PAJ_RS16795 IPR010987 Glutathione S-transferase, C-terminal-like PAJ_RS16795 IPR012336 Thioredoxin-like fold PAJ_RS16800 IPR003719 Phenazine biosynthesis PhzF protein PAJ_RS16805 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS16805 IPR016040 NAD(P)-binding domain PAJ_RS16810 IPR000847 Transcription regulator HTH, LysR PAJ_RS16810 IPR005119 LysR, substrate-binding PAJ_RS16810 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS16815 IPR005274 Inner membrane protein YhjD PAJ_RS16815 IPR017039 Virulence factor BrkB PAJ_RS16820 IPR004736 Citrate-proton symport PAJ_RS16820 IPR005828 General substrate transporter PAJ_RS16820 IPR005829 Sugar transporter, conserved site PAJ_RS16820 IPR011701 Major facilitator superfamily PAJ_RS16820 IPR020846 Major facilitator superfamily domain PAJ_RS16825 IPR000847 Transcription regulator HTH, LysR PAJ_RS16825 IPR005119 LysR, substrate-binding PAJ_RS16825 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS16830 IPR001638 Extracellular solute-binding protein, family 3 PAJ_RS16830 IPR018313 Extracellular solute-binding protein, family 3, conserved site PAJ_RS16840 IPR018724 2OG-Fe dioxygenase PAJ_RS16845 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS16845 IPR016040 NAD(P)-binding domain PAJ_RS16845 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS16850 IPR013816 ATP-grasp fold, subdomain 2 PAJ_RS16855 IPR011701 Major facilitator superfamily PAJ_RS16855 IPR020846 Major facilitator superfamily domain PAJ_RS16860 IPR000506 Acetohydroxy acid isomeroreductase C-terminal PAJ_RS16860 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS16860 IPR013023 Acetohydroxy acid isomeroreductase PAJ_RS16860 IPR013116 Acetohydroxy acid isomeroreductase, catalytic PAJ_RS16860 IPR013328 Dehydrogenase, multihelical PAJ_RS16860 IPR016040 NAD(P)-binding domain PAJ_RS16865 IPR000847 Transcription regulator HTH, LysR PAJ_RS16865 IPR005119 LysR, substrate-binding PAJ_RS16865 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS16870 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site PAJ_RS16870 IPR001721 ACT-like domain PAJ_RS16870 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme PAJ_RS16870 IPR005787 Threonine dehydratase, biosynthetic PAJ_RS16875 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase PAJ_RS16875 IPR004404 Dihydroxy-acid dehydratase PAJ_RS16875 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel PAJ_RS16875 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site PAJ_RS16880 IPR001544 Aminotransferase, class IV PAJ_RS16880 IPR005785 Branched-chain amino acid aminotransferase I PAJ_RS16880 IPR018300 Aminotransferase, class IV, conserved site PAJ_RS16890 IPR000399 TPP-binding enzyme, conserved site PAJ_RS16890 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding PAJ_RS16890 IPR012000 Thiamine pyrophosphate enzyme, central domain PAJ_RS16890 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain PAJ_RS16890 IPR012846 Acetolactate synthase, large subunit, biosynthetic PAJ_RS16890 IPR029035 DHS-like NAD/FAD-binding domain PAJ_RS16890 IPR029061 Thiamin diphosphate-binding fold PAJ_RS16895 IPR000523 Magnesium chelatase, ChlI subunit PAJ_RS16895 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase PAJ_RS16895 IPR003593 AAA+ ATPase domain PAJ_RS16895 IPR004482 Mg chelatase-related protein PAJ_RS16895 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAJ_RS16895 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS16895 IPR025158 Mg chelatase-related protein, C-terminal domain PAJ_RS16895 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS16900 IPR007335 Protein of unknown function DUF413 PAJ_RS16905 IPR000847 Transcription regulator HTH, LysR PAJ_RS16905 IPR005119 LysR, substrate-binding PAJ_RS16905 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS16955 IPR000531 TonB-dependent receptor, beta-barrel PAJ_RS16955 IPR010101 TonB-dependent vitamin B12 transporter BtuB PAJ_RS16955 IPR010917 TonB-dependent receptor, conserved site PAJ_RS16955 IPR012910 TonB-dependent receptor, plug PAJ_RS16960 IPR010280 (Uracil-5)-methyltransferase family PAJ_RS16960 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA PAJ_RS16960 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS16960 IPR030390 PAJ_RS16960 PAJ_RS16960 IPR030391 PAJ_RS16960 PAJ_RS16965 IPR009867 Protein of unknown function DUF1422 PAJ_RS16970 IPR001647 DNA-binding HTH domain, TetR-type PAJ_RS16970 IPR009057 Homeodomain-like PAJ_RS16970 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal PAJ_RS16975 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PAJ_RS16975 IPR016156 FAD/NAD-linked reductase, dimerisation domain PAJ_RS16975 IPR022962 Soluble pyridine nucleotide transhydrogenase PAJ_RS16975 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS16980 IPR000847 Transcription regulator HTH, LysR PAJ_RS16980 IPR005119 LysR, substrate-binding PAJ_RS16980 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS16985 IPR000362 Fumarate lyase family PAJ_RS16985 IPR008948 L-Aspartase-like PAJ_RS16985 IPR009049 Argininosuccinate lyase PAJ_RS16985 IPR020557 Fumarate lyase, conserved site PAJ_RS16985 IPR022761 Fumarate lyase, N-terminal PAJ_RS16985 IPR024083 Fumarase/histidase, N-terminal PAJ_RS16985 IPR029419 Argininosuccinate lyase, C-terminal PAJ_RS16990 IPR001518 Argininosuccinate synthase PAJ_RS16990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS16990 IPR018223 Argininosuccinate synthase, conserved site PAJ_RS16990 IPR023434 Argininosuccinate synthase, type 1 subfamily PAJ_RS16990 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body PAJ_RS16995 IPR001048 Aspartate/glutamate/uridylate kinase PAJ_RS16995 IPR004662 Acetylglutamate kinase PAJ_RS17000 IPR000534 Semialdehyde dehydrogenase, NAD-binding PAJ_RS17000 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 PAJ_RS17000 IPR012280 Semialdehyde dehydrogenase, dimerisation domain PAJ_RS17000 IPR016040 NAD(P)-binding domain PAJ_RS17000 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site PAJ_RS17005 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site PAJ_RS17005 IPR002933 Peptidase M20 PAJ_RS17005 IPR010169 Acetylornithine deacetylase (ArgE) PAJ_RS17005 IPR011650 Peptidase M20, dimerisation domain PAJ_RS17010 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain PAJ_RS17010 IPR018129 Phosphoenolpyruvate carboxylase, active site PAJ_RS17010 IPR021135 Phosphoenolpyruvate carboxylase PAJ_RS17010 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type PAJ_RS17010 IPR033129 PAJ_RS17010 PAJ_RS17015 IPR003660 HAMP linker domain PAJ_RS17015 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS17015 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS17015 IPR024478 4HB MCP domain PAJ_RS17020 IPR003171 Methylenetetrahydrofolate reductase PAJ_RS17020 IPR004620 5,10-methylenetetrahydrofolate reductase PAJ_RS17020 IPR029041 FAD-linked oxidoreductase-like PAJ_RS17025 IPR001048 Aspartate/glutamate/uridylate kinase PAJ_RS17025 IPR001341 Aspartate kinase domain PAJ_RS17025 IPR001342 Homoserine dehydrogenase, catalytic PAJ_RS17025 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding PAJ_RS17025 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I PAJ_RS17025 IPR016040 NAD(P)-binding domain PAJ_RS17025 IPR018042 Aspartate kinase, conserved site PAJ_RS17025 IPR019811 Homoserine dehydrogenase, conserved site PAJ_RS17030 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme PAJ_RS17030 IPR011821 O-succinylhomoserine (thiol)-lyase PAJ_RS17030 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS17030 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS17030 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS17035 IPR002084 Methionine repressor MetJ PAJ_RS17035 IPR010985 Ribbon-helix-helix PAJ_RS17035 IPR023453 Methionine repressor MetJ domain PAJ_RS17040 IPR002150 Ribosomal protein L31 PAJ_RS17040 IPR027491 Ribosomal protein L31 type A PAJ_RS17045 IPR001650 Helicase, C-terminal PAJ_RS17045 IPR005259 Primosomal protein n PAJ_RS17045 IPR006935 Helicase/UvrB domain PAJ_RS17045 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS17045 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17050 IPR000843 Transcription regulator HTH, LacI PAJ_RS17050 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS17050 IPR028082 Periplasmic binding protein-like I PAJ_RS17055 IPR007730 Sporulation-related domain PAJ_RS17055 IPR011930 Cell division protein FtsN PAJ_RS17060 IPR001353 Proteasome, subunit alpha/beta PAJ_RS17060 IPR022281 ATP-dependent protease, HslV subunit PAJ_RS17060 IPR029055 Nucleophile aminohydrolases, N-terminal PAJ_RS17065 IPR003593 AAA+ ATPase domain PAJ_RS17065 IPR003959 ATPase, AAA-type, core PAJ_RS17065 IPR004491 Heat shock protein HslU PAJ_RS17065 IPR019489 Clp ATPase, C-terminal PAJ_RS17065 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17070 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase PAJ_RS17070 IPR010203 Regulator of ribonuclease activity A PAJ_RS17070 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria PAJ_RS17075 IPR009252 Cell division protein ZapB PAJ_RS17080 IPR000425 Major intrinsic protein PAJ_RS17080 IPR022357 Major intrinsic protein, conserved site PAJ_RS17080 IPR023271 Aquaporin-like PAJ_RS17085 IPR000577 PAJ_RS17085 PAJ_RS17085 IPR005999 Glycerol kinase PAJ_RS17085 IPR018483 Carbohydrate kinase, FGGY, conserved site PAJ_RS17085 IPR018484 Carbohydrate kinase, FGGY, N-terminal PAJ_RS17085 IPR018485 Carbohydrate kinase, FGGY, C-terminal PAJ_RS17090 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase PAJ_RS17095 IPR011701 Major facilitator superfamily PAJ_RS17095 IPR020846 Major facilitator superfamily domain PAJ_RS17100 IPR001433 Oxidoreductase FAD/NAD(P)-binding PAJ_RS17100 IPR008333 Oxidoreductase, FAD-binding domain PAJ_RS17100 IPR017938 Riboflavin synthase-like beta-barrel PAJ_RS17105 IPR008523 Lactobacillus phage LBR48, DUF805 PAJ_RS17110 IPR009918 Protein of unknown function DUF1454 PAJ_RS17115 IPR000652 Triosephosphate isomerase PAJ_RS17115 IPR013785 Aldolase-type TIM barrel PAJ_RS17115 IPR020861 Triosephosphate isomerase, active site PAJ_RS17115 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic PAJ_RS17120 IPR003763 CDP-diacylglycerol pyrophosphatase PAJ_RS17120 IPR011146 HIT-like domain PAJ_RS17125 IPR000957 Sulphate/thiosulphate-binding, conserved site PAJ_RS17125 IPR005669 Thiosulphate/Sulfate-binding protein PAJ_RS17130 IPR000023 Phosphofructokinase domain PAJ_RS17130 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type PAJ_RS17130 IPR012828 6-phosphofructokinase PAJ_RS17130 IPR015912 Phosphofructokinase, conserved site PAJ_RS17130 IPR022953 Phosphofructokinase PAJ_RS17135 IPR002524 Cation efflux protein PAJ_RS17135 IPR027469 Cation efflux protein transmembrane domain PAJ_RS17135 IPR027470 Cation efflux protein cytoplasmic domain PAJ_RS17140 IPR019626 Stress-induced protein, KGG, repeat PAJ_RS17145 IPR012899 LTXXQ motif family protein PAJ_RS17150 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS17150 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS17150 IPR011006 CheY-like superfamily PAJ_RS17150 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS17155 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS17155 IPR003660 HAMP linker domain PAJ_RS17155 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS17155 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS17155 IPR032404 PAJ_RS17155 PAJ_RS17160 IPR001537 tRNA/rRNA methyltransferase, SpoU type PAJ_RS17160 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase PAJ_RS17160 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PAJ_RS17160 IPR029028 Alpha/beta knot methyltransferases PAJ_RS17165 IPR001451 Bacterial transferase hexapeptide repeat PAJ_RS17165 IPR005881 Serine O-acetyltransferase PAJ_RS17165 IPR010493 Serine acetyltransferase, N-terminal PAJ_RS17165 IPR011004 Trimeric LpxA-like PAJ_RS17165 IPR018357 Hexapeptide transferase, conserved site PAJ_RS17170 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal PAJ_RS17170 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent PAJ_RS17170 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS17170 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal PAJ_RS17170 IPR013328 Dehydrogenase, multihelical PAJ_RS17170 IPR016040 NAD(P)-binding domain PAJ_RS17175 IPR003708 Bacterial protein export chaperone SecB PAJ_RS17180 IPR002109 Glutaredoxin PAJ_RS17180 IPR011767 Glutaredoxin active site PAJ_RS17180 IPR011900 Glutaredoxin, GrxC PAJ_RS17180 IPR012336 Thioredoxin-like fold PAJ_RS17180 IPR014025 Glutaredoxin subgroup PAJ_RS17185 IPR001763 Rhodanese-like domain PAJ_RS17190 IPR011055 Duplicated hybrid motif PAJ_RS17190 IPR016047 Peptidase M23 PAJ_RS17195 IPR002509 Polysaccharide deacetylase PAJ_RS17195 IPR006837 Protein of unknown function DUF610, YibQ PAJ_RS17195 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel PAJ_RS17200 IPR002085 Alcohol dehydrogenase superfamily, zinc-type PAJ_RS17200 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PAJ_RS17200 IPR004627 L-threonine 3-dehydrogenase PAJ_RS17200 IPR011032 GroES (chaperonin 10)-like PAJ_RS17200 IPR013149 Alcohol dehydrogenase, C-terminal PAJ_RS17200 IPR013154 Alcohol dehydrogenase GroES-like PAJ_RS17200 IPR016040 NAD(P)-binding domain PAJ_RS17200 IPR020843 Polyketide synthase, enoylreductase PAJ_RS17205 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site PAJ_RS17205 IPR004839 Aminotransferase, class I/classII PAJ_RS17205 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase PAJ_RS17205 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS17205 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS17205 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS17210 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain PAJ_RS17210 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase PAJ_RS17210 IPR016040 NAD(P)-binding domain PAJ_RS17215 IPR002201 Glycosyl transferase, family 9 PAJ_RS17215 IPR011910 Lipopolysaccharide heptosyltransferase II PAJ_RS17220 IPR002201 Glycosyl transferase, family 9 PAJ_RS17220 IPR011908 Lipopolysaccharide heptosyltransferase I PAJ_RS17225 IPR001296 Glycosyl transferase, family 1 PAJ_RS17225 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain PAJ_RS17230 IPR007016 O-antigen ligase-related PAJ_RS17235 IPR001173 Glycosyltransferase 2-like PAJ_RS17235 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS17240 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel PAJ_RS17245 IPR001296 Glycosyl transferase, family 1 PAJ_RS17245 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain PAJ_RS17250 IPR002201 Glycosyl transferase, family 9 PAJ_RS17255 IPR001173 Glycosyltransferase 2-like PAJ_RS17255 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS17260 IPR002201 Glycosyl transferase, family 9 PAJ_RS17260 IPR011916 Lipopolysaccharide heptosyltransferase III, putative PAJ_RS17265 IPR001296 Glycosyl transferase, family 1 PAJ_RS17265 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain PAJ_RS17270 IPR001296 Glycosyl transferase, family 1 PAJ_RS17270 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal PAJ_RS17275 IPR001173 Glycosyltransferase 2-like PAJ_RS17275 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS17280 IPR001980 Coenzyme A biosynthesis protein PAJ_RS17280 IPR004821 Cytidyltransferase-like domain PAJ_RS17280 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS17285 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase PAJ_RS17285 IPR010979 Ribosomal protein S13-like, H2TH PAJ_RS17285 IPR012319 DNA glycosylase/AP lyase, catalytic domain PAJ_RS17285 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding PAJ_RS17285 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site PAJ_RS17285 IPR020629 Formamidopyrimidine-DNA glycosylase PAJ_RS17290 IPR001705 Ribosomal protein L33 PAJ_RS17290 IPR011332 Zinc-binding ribosomal protein PAJ_RS17290 IPR018264 Ribosomal protein L33, conserved site PAJ_RS17295 IPR001383 Ribosomal protein L28 PAJ_RS17295 IPR026569 Ribosomal protein L28/L24 PAJ_RS17300 IPR001405 RadC protein PAJ_RS17300 IPR010994 RuvA domain 2-like PAJ_RS17300 IPR020891 Uncharacterised protein family UPF0758, conserved site PAJ_RS17300 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily PAJ_RS17300 IPR025657 RadC-like JAB domain PAJ_RS17305 IPR003382 Flavoprotein PAJ_RS17305 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC PAJ_RS17305 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal PAJ_RS17310 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase PAJ_RS17310 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase PAJ_RS17310 IPR029054 dUTPase-like PAJ_RS17315 IPR001647 DNA-binding HTH domain, TetR-type PAJ_RS17315 IPR009057 Homeodomain-like PAJ_RS17315 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PAJ_RS17315 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal PAJ_RS17315 IPR023769 Nucleoid occlusion factor SlmA PAJ_RS17315 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PAJ_RS17320 IPR000836 Phosphoribosyltransferase domain PAJ_RS17320 IPR004467 Orotate phosphoribosyl transferase domain PAJ_RS17320 IPR023031 Orotate phosphoribosyltransferase PAJ_RS17320 IPR029057 Phosphoribosyltransferase-like PAJ_RS17325 IPR001247 Exoribonuclease, phosphorolytic domain 1 PAJ_RS17325 IPR002381 Ribonuclease phosphorolytic, bacterial-type PAJ_RS17325 IPR015847 Exoribonuclease, phosphorolytic domain 2 PAJ_RS17325 IPR018336 Ribonuclease PH, conserved site PAJ_RS17325 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS17325 IPR027408 PNPase/RNase PH domain PAJ_RS17330 IPR002668 Concentrative nucleoside transporter N-terminal domain PAJ_RS17330 IPR008276 Concentrative nucleoside transporter PAJ_RS17330 IPR011642 Nucleoside recognition Gate PAJ_RS17330 IPR011657 Concentrative nucleoside transporter C-terminal domain PAJ_RS17335 IPR021957 Protein of unknown function DUF3574 PAJ_RS17340 IPR005229 Conserved hypothetical protein CHP00255 PAJ_RS17340 IPR013527 YicC-like, N-terminal PAJ_RS17340 IPR013551 Domain of unknown function DUF1732 PAJ_RS17350 IPR001932 Protein phosphatase 2C (PP2C)-like domain PAJ_RS17350 IPR015655 Protein phosphatase 2C PAJ_RS17355 IPR000719 Protein kinase domain PAJ_RS17355 IPR011009 Protein kinase-like domain PAJ_RS17360 IPR000719 Protein kinase domain PAJ_RS17360 IPR008271 Serine/threonine-protein kinase, active site PAJ_RS17360 IPR011009 Protein kinase-like domain PAJ_RS17360 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS17370 IPR004960 Bacterial lipid A biosynthesis acyltransferase PAJ_RS17370 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase PAJ_RS17370 IPR030857 PAJ_RS17370 PAJ_RS17380 IPR005115 Uncharacterised domain UPF0126 PAJ_RS17385 IPR004150 NAD-dependent DNA ligase, OB-fold PAJ_RS17385 IPR010994 RuvA domain 2-like PAJ_RS17385 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS17385 IPR013839 NAD-dependent DNA ligase, adenylation PAJ_RS17385 IPR013840 NAD-dependent DNA ligase, N-terminal PAJ_RS17385 IPR020923 DNA ligase B PAJ_RS17390 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PAJ_RS17390 IPR017665 Guanylate kinase PAJ_RS17390 IPR020590 Guanylate kinase, conserved site PAJ_RS17390 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17395 IPR003716 DNA-directed RNA polymerase, omega subunit PAJ_RS17395 IPR006110 RNA polymerase, subunit omega/K/RPB6 PAJ_RS17395 IPR012293 RNA polymerase subunit, RPB6/omega PAJ_RS17400 IPR002912 ACT domain PAJ_RS17400 IPR003607 HD/PDEase domain PAJ_RS17400 IPR004095 TGS PAJ_RS17400 IPR004811 RelA/SpoT family PAJ_RS17400 IPR007685 RelA/SpoT PAJ_RS17400 IPR012675 Beta-grasp domain PAJ_RS17400 IPR012676 TGS-like PAJ_RS17405 IPR001537 tRNA/rRNA methyltransferase, SpoU type PAJ_RS17405 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal PAJ_RS17405 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PAJ_RS17405 IPR029028 Alpha/beta knot methyltransferases PAJ_RS17410 IPR001650 Helicase, C-terminal PAJ_RS17410 IPR004609 ATP-dependent DNA helicase RecG PAJ_RS17410 IPR011545 DEAD/DEAH box helicase domain PAJ_RS17410 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS17410 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS17410 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17410 IPR033454 PAJ_RS17410 PAJ_RS17415 IPR006042 Xanthine/uracil permease PAJ_RS17415 IPR006043 Xanthine/uracil/vitamin C permease PAJ_RS17415 IPR017588 Xanthine permease PAJ_RS17420 IPR007844 AsmA PAJ_RS17425 IPR000182 GNAT domain PAJ_RS17425 IPR012660 Thioesterase, putative PAJ_RS17425 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS17425 IPR029069 HotDog domain PAJ_RS17430 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase PAJ_RS17430 IPR023509 D-Tyr tRNAtyr deacylase-like domain PAJ_RS17435 IPR017039 Virulence factor BrkB PAJ_RS17435 IPR023679 Uncharacterised protein family UPF0761, bacterial PAJ_RS17440 IPR006439 HAD hydrolase, subfamily IA PAJ_RS17440 IPR023198 Phosphoglycolate phosphatase, domain 2 PAJ_RS17440 IPR023214 HAD-like domain PAJ_RS17445 IPR000640 Translation elongation factor EFG, V domain PAJ_RS17445 IPR000795 Elongation factor, GTP-binding domain PAJ_RS17445 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 PAJ_RS17445 IPR005225 Small GTP-binding protein domain PAJ_RS17445 IPR006298 GTP-binding protein TypA PAJ_RS17445 IPR009000 Translation protein, beta-barrel domain PAJ_RS17445 IPR009022 Elongation factor G, III-V domain PAJ_RS17445 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17445 IPR031157 PAJ_RS17445 PAJ_RS17450 IPR001637 Glutamine synthetase class-I, adenylation site PAJ_RS17450 IPR004809 Glutamine synthetase type I PAJ_RS17450 IPR008146 Glutamine synthetase, catalytic domain PAJ_RS17450 IPR008147 Glutamine synthetase, beta-Grasp PAJ_RS17450 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain PAJ_RS17450 IPR027302 Glutamine synthetase, N-terminal conserved site PAJ_RS17450 IPR027303 Glutamine synthetase, glycine-rich site PAJ_RS17455 IPR000014 PAS domain PAJ_RS17455 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS17455 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS17455 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS17455 IPR013767 PAS fold PAJ_RS17460 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS17460 IPR002078 RNA polymerase sigma factor 54 interaction domain PAJ_RS17460 IPR002197 DNA binding HTH domain, Fis-type PAJ_RS17460 IPR003593 AAA+ ATPase domain PAJ_RS17460 IPR009057 Homeodomain-like PAJ_RS17460 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) PAJ_RS17460 IPR011006 CheY-like superfamily PAJ_RS17460 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PAJ_RS17460 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 PAJ_RS17460 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17465 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN PAJ_RS17465 IPR006638 Elongator protein 3/MiaB/NifB PAJ_RS17465 IPR007197 Radical SAM PAJ_RS17465 IPR010723 HemN, C-terminal domain PAJ_RS17465 IPR023404 Radical SAM, alpha/beta horseshoe PAJ_RS17470 IPR007336 Der GTPase activator PAJ_RS17475 IPR006073 GTP binding domain PAJ_RS17475 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC PAJ_RS17475 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17480 IPR001098 DNA-directed DNA polymerase, family A, palm domain PAJ_RS17480 IPR002298 DNA polymerase A PAJ_RS17480 IPR002421 5'-3' exonuclease, N-terminal PAJ_RS17480 IPR002562 3'-5' exonuclease domain PAJ_RS17480 IPR008918 Helix-hairpin-helix motif, class 2 PAJ_RS17480 IPR012337 Ribonuclease H-like domain PAJ_RS17480 IPR018320 DNA polymerase 1 PAJ_RS17480 IPR019760 DNA-directed DNA polymerase, family A, conserved site PAJ_RS17480 IPR020045 5'-3' exonuclease, C-terminal domain PAJ_RS17480 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal PAJ_RS17480 IPR029060 PIN domain-like PAJ_RS17485 IPR001853 DSBA-like thioredoxin domain PAJ_RS17485 IPR012336 Thioredoxin-like fold PAJ_RS17485 IPR017937 Thioredoxin, conserved site PAJ_RS17485 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL PAJ_RS17490 IPR002575 Aminoglycoside phosphotransferase PAJ_RS17490 IPR011009 Protein kinase-like domain PAJ_RS17490 IPR032882 PAJ_RS17490 PAJ_RS17495 IPR009383 Protein of unknown function DUF1040 PAJ_RS17500 IPR013482 Molybdenum cofactor guanylyltransferase PAJ_RS17500 IPR025877 MobA-like NTP transferase domain PAJ_RS17500 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS17505 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain PAJ_RS17505 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17530 IPR004638 Drug resistance transporter EmrB/QacA subfamily PAJ_RS17530 IPR011701 Major facilitator superfamily PAJ_RS17530 IPR020846 Major facilitator superfamily domain PAJ_RS17535 IPR000843 Transcription regulator HTH, LacI PAJ_RS17535 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS17535 IPR028082 Periplasmic binding protein-like I PAJ_RS17540 IPR002139 Ribokinase PAJ_RS17540 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PAJ_RS17540 IPR011611 Carbohydrate kinase PfkB PAJ_RS17540 IPR011877 Ribokinase, bacterial PAJ_RS17540 IPR029056 Ribokinase-like PAJ_RS17545 IPR025997 Periplasmic binding protein domain PAJ_RS17545 IPR028082 Periplasmic binding protein-like I PAJ_RS17550 IPR001851 ABC transporter, permease PAJ_RS17555 IPR003439 ABC transporter-like PAJ_RS17555 IPR003593 AAA+ ATPase domain PAJ_RS17555 IPR017871 ABC transporter, conserved site PAJ_RS17555 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17560 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU PAJ_RS17560 IPR023064 D-ribose pyranase PAJ_RS17560 IPR023750 RbsD-like domain PAJ_RS17565 IPR005220 Viral OB-fold, YgiW PAJ_RS17565 IPR016052 Bacteriophage 933W, L0136 PAJ_RS17570 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS17570 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS17570 IPR011006 CheY-like superfamily PAJ_RS17570 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS17575 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS17575 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS17575 IPR013727 Two-component sensor kinase N-terminal PAJ_RS17580 IPR003855 K+ potassium transporter PAJ_RS17580 IPR023051 Potassium uptake protein, low affinity, Kup PAJ_RS17585 IPR003593 AAA+ ATPase domain PAJ_RS17585 IPR011704 ATPase, dynein-related, AAA domain PAJ_RS17585 IPR022547 ATPase, RavA, C-terminal PAJ_RS17585 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17590 IPR002035 von Willebrand factor, type A PAJ_RS17590 IPR008912 Uncharacterised protein family CoxE-like PAJ_RS17590 IPR023481 Uncharacterised protein family ViaA PAJ_RS17595 IPR005532 Formylglycine-generating sulphatase enzyme domain PAJ_RS17595 IPR013216 Methyltransferase type 11 PAJ_RS17595 IPR016187 C-type lectin fold PAJ_RS17595 IPR024775 DinB-like domain PAJ_RS17595 IPR027577 5-histidylcysteine sulfoxide synthase PAJ_RS17595 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain PAJ_RS17595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS17600 IPR000485 AsnC-type HTH domain PAJ_RS17600 IPR011008 Dimeric alpha-beta barrel PAJ_RS17600 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS17600 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PAJ_RS17600 IPR019887 Transcription regulator AsnC-type, C-terminal PAJ_RS17600 IPR019888 Transcription regulator AsnC-type PAJ_RS17605 IPR001094 Flavodoxin PAJ_RS17605 IPR008254 Flavodoxin/nitric oxide synthase PAJ_RS17605 IPR029039 Flavoprotein-like PAJ_RS17610 IPR002218 Glucose-inhibited division protein A-related PAJ_RS17610 IPR004416 Glucose-inhibited division protein A PAJ_RS17610 IPR020595 Glucose-inhibited division protein A-related, conserved site PAJ_RS17610 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS17610 IPR026904 GidA associated domain 3 PAJ_RS17615 IPR003682 rRNA small subunit methyltransferase G PAJ_RS17615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS17620 IPR005598 ATP synthase protein I PAJ_RS17625 IPR000568 ATPase, F0 complex, subunit A PAJ_RS17625 IPR023011 ATPase, F0 complex, subunit A, active site PAJ_RS17630 IPR000454 ATPase, F0 complex, subunit C PAJ_RS17630 IPR002379 V-ATPase proteolipid subunit C-like domain PAJ_RS17630 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast PAJ_RS17630 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site PAJ_RS17635 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast PAJ_RS17635 IPR005864 ATPase, F0 complex, subunit B, bacterial PAJ_RS17635 IPR028987 F-type ATP synthase subunit B-like, membrane domain PAJ_RS17640 IPR000711 ATPase, OSCP/delta subunit PAJ_RS17640 IPR020781 ATPase, OSCP/delta subunit, conserved site PAJ_RS17640 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain PAJ_RS17645 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain PAJ_RS17645 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal PAJ_RS17645 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain PAJ_RS17645 IPR005294 ATPase, F1 complex, alpha subunit PAJ_RS17645 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site PAJ_RS17645 IPR023366 ATP synthase subunit alpha-like domain PAJ_RS17645 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17650 IPR000131 ATPase, F1 complex, gamma subunit PAJ_RS17650 IPR023632 ATPase, F1 complex, gamma subunit conserved site PAJ_RS17650 IPR023633 ATPase, F1 complex, gamma subunit domain PAJ_RS17655 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain PAJ_RS17655 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal PAJ_RS17655 IPR003593 AAA+ ATPase domain PAJ_RS17655 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain PAJ_RS17655 IPR005722 ATPase, F1 complex, beta subunit PAJ_RS17655 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site PAJ_RS17655 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal PAJ_RS17655 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17660 IPR001469 ATPase, F1 complex, delta/epsilon subunit PAJ_RS17660 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal PAJ_RS17660 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain PAJ_RS17665 IPR001451 Bacterial transferase hexapeptide repeat PAJ_RS17665 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase PAJ_RS17665 IPR011004 Trimeric LpxA-like PAJ_RS17665 IPR018357 Hexapeptide transferase, conserved site PAJ_RS17665 IPR025877 MobA-like NTP transferase domain PAJ_RS17665 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS17670 IPR001347 Sugar isomerase (SIS) PAJ_RS17670 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising PAJ_RS17670 IPR029055 Nucleophile aminohydrolases, N-terminal PAJ_RS17680 IPR005673 ABC transporter, phosphate-binding protein PstS PAJ_RS17680 IPR024370 PBP domain PAJ_RS17685 IPR000515 MetI-like domain PAJ_RS17685 IPR011864 Phosphate ABC transporter, permease protein PstC PAJ_RS17690 IPR000515 MetI-like domain PAJ_RS17690 IPR005672 Phosphate transport system permease protein PstA PAJ_RS17695 IPR003439 ABC transporter-like PAJ_RS17695 IPR003593 AAA+ ATPase domain PAJ_RS17695 IPR017871 ABC transporter, conserved site PAJ_RS17695 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17700 IPR026022 PhoU domain PAJ_RS17700 IPR028366 Phosphate transport system protein PhoU PAJ_RS17705 IPR005829 Sugar transporter, conserved site PAJ_RS17705 IPR011701 Major facilitator superfamily PAJ_RS17705 IPR020846 Major facilitator superfamily domain PAJ_RS17710 IPR000577 PAJ_RS17710 PAJ_RS17710 IPR006000 Xylulokinase PAJ_RS17710 IPR018483 Carbohydrate kinase, FGGY, conserved site PAJ_RS17710 IPR018484 Carbohydrate kinase, FGGY, N-terminal PAJ_RS17710 IPR018485 Carbohydrate kinase, FGGY, C-terminal PAJ_RS17715 IPR001998 Xylose isomerase PAJ_RS17715 IPR013022 Xylose isomerase-like, TIM barrel domain PAJ_RS17715 IPR013452 Xylose isomerase, bacterial-type PAJ_RS17720 IPR013456 D-xylose ABC transporter, substrate-binding protein PAJ_RS17720 IPR025997 Periplasmic binding protein domain PAJ_RS17720 IPR028082 Periplasmic binding protein-like I PAJ_RS17725 IPR003439 ABC transporter-like PAJ_RS17725 IPR003593 AAA+ ATPase domain PAJ_RS17725 IPR013455 ABC transporter, D-xylose, ATP-binding protein PAJ_RS17725 IPR017871 ABC transporter, conserved site PAJ_RS17725 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17730 IPR001851 ABC transporter, permease PAJ_RS17735 IPR009057 Homeodomain-like PAJ_RS17735 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS17735 IPR018062 HTH domain AraC-type, conserved site PAJ_RS17735 IPR020449 Transcription regulator HTH, AraC- type PAJ_RS17735 IPR028082 Periplasmic binding protein-like I PAJ_RS17740 IPR000182 GNAT domain PAJ_RS17740 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS17740 IPR032962 PAJ_RS17740 PAJ_RS17745 IPR011013 Galactose mutarotase-like domain PAJ_RS17745 IPR027839 Protein of unknown function DUF4432 PAJ_RS17750 IPR025997 Periplasmic binding protein domain PAJ_RS17750 IPR028082 Periplasmic binding protein-like I PAJ_RS17755 IPR003439 ABC transporter-like PAJ_RS17755 IPR003593 AAA+ ATPase domain PAJ_RS17755 IPR017871 ABC transporter, conserved site PAJ_RS17755 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17760 IPR001851 ABC transporter, permease PAJ_RS17765 IPR001851 ABC transporter, permease PAJ_RS17770 IPR000281 Helix-turn-helix protein RpiR PAJ_RS17770 IPR001347 Sugar isomerase (SIS) PAJ_RS17770 IPR009057 Homeodomain-like PAJ_RS17770 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS17775 IPR003718 OsmC/Ohr family PAJ_RS17775 IPR015946 K homology domain-like, alpha/beta PAJ_RS17780 IPR020846 Major facilitator superfamily domain PAJ_RS17785 IPR016084 Haem oxygenase-like, multi-helical PAJ_RS17785 IPR028201 PqqC-like protein PAJ_RS17790 IPR025906 Putative motility protein PAJ_RS17795 IPR010854 Domain of unknown function DUF1471 PAJ_RS17795 IPR025543 Dodecin-like PAJ_RS17800 IPR000014 PAS domain PAJ_RS17800 IPR001610 PAC motif PAJ_RS17800 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS17800 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS17800 IPR013655 PAS fold-3 PAJ_RS17800 IPR013656 PAS fold-4 PAJ_RS17805 IPR000847 Transcription regulator HTH, LysR PAJ_RS17805 IPR005119 LysR, substrate-binding PAJ_RS17805 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS17815 IPR004736 Citrate-proton symport PAJ_RS17815 IPR005829 Sugar transporter, conserved site PAJ_RS17815 IPR011701 Major facilitator superfamily PAJ_RS17815 IPR020846 Major facilitator superfamily domain PAJ_RS17820 IPR003192 Porin, LamB type PAJ_RS17825 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit PAJ_RS17830 IPR001360 Glycoside hydrolase, family 1 PAJ_RS17830 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS17830 IPR017853 Glycoside hydrolase, superfamily PAJ_RS17830 IPR018120 Glycoside hydrolase, family 1, active site PAJ_RS17835 IPR003352 Phosphotransferase system, EIIC PAJ_RS17835 IPR004501 Phosphotransferase system, EIIC component, type 3 PAJ_RS17835 IPR004796 Phosphotransferase system, cellobiose-type IIC component PAJ_RS17840 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PAJ_RS17845 IPR000843 Transcription regulator HTH, LacI PAJ_RS17845 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS17845 IPR028082 Periplasmic binding protein-like I PAJ_RS17850 IPR000600 ROK PAJ_RS17850 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS17855 IPR002611 IstB-like ATP-binding protein PAJ_RS17855 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17855 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein PAJ_RS17860 IPR020917 Primosomal protein 1 PAJ_RS17870 IPR004597 DNA-3-methyladenine glycosylase I PAJ_RS17870 IPR005019 Methyladenine glycosylase PAJ_RS17870 IPR011257 DNA glycosylase PAJ_RS17875 IPR006664 Outer membrane protein, bacterial PAJ_RS17875 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal PAJ_RS17875 IPR006690 Outer membrane protein, OmpA-like, conserved site PAJ_RS17880 IPR000843 Transcription regulator HTH, LacI PAJ_RS17880 IPR001761 Periplasmic binding protein/LacI sugar binding domain PAJ_RS17880 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS17880 IPR028082 Periplasmic binding protein-like I PAJ_RS17885 IPR000843 Transcription regulator HTH, LacI PAJ_RS17885 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS17885 IPR028082 Periplasmic binding protein-like I PAJ_RS17890 IPR013022 Xylose isomerase-like, TIM barrel domain PAJ_RS17895 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PAJ_RS17895 IPR011611 Carbohydrate kinase PfkB PAJ_RS17895 IPR029056 Ribokinase-like PAJ_RS17900 IPR000849 Sugar phosphate transporter PAJ_RS17900 IPR011701 Major facilitator superfamily PAJ_RS17900 IPR020846 Major facilitator superfamily domain PAJ_RS17905 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PAJ_RS17905 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PAJ_RS17905 IPR016040 NAD(P)-binding domain PAJ_RS17905 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PAJ_RS17915 IPR000620 Drug/metabolite transporter PAJ_RS17920 IPR006680 Amidohydrolase 1 PAJ_RS17920 IPR032466 PAJ_RS17920 PAJ_RS17925 IPR006842 Transposase (putative), YhgA-like PAJ_RS17925 IPR010106 Conserved hypothetical protein CHP01784 PAJ_RS17930 IPR002068 Alpha crystallin/Hsp20 domain PAJ_RS17930 IPR008978 HSP20-like chaperone PAJ_RS17930 IPR031107 PAJ_RS17930 PAJ_RS17935 IPR010780 Protein of unknown function DUF1375 PAJ_RS17940 IPR011042 Six-bladed beta-propeller, TolB-like PAJ_RS17940 IPR011659 WD40-like Beta Propeller PAJ_RS17940 IPR022223 Protein of unknown function DUF3748 PAJ_RS17945 IPR000150 Cof protein PAJ_RS17945 IPR006379 HAD-superfamily hydrolase, subfamily IIB PAJ_RS17945 IPR023214 HAD-like domain PAJ_RS17950 IPR000565 DNA topoisomerase, type IIA, subunit B PAJ_RS17950 IPR001241 DNA topoisomerase, type IIA PAJ_RS17950 IPR002288 DNA gyrase B subunit, C-terminal PAJ_RS17950 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS17950 IPR006171 Toprim domain PAJ_RS17950 IPR011557 DNA gyrase, subunit B PAJ_RS17950 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 PAJ_RS17950 IPR013759 DNA topoisomerase, type IIA, central domain PAJ_RS17950 IPR013760 DNA topoisomerase, type IIA-like domain PAJ_RS17950 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAJ_RS17950 IPR018522 DNA topoisomerase, type IIA, conserved site PAJ_RS17950 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS17955 IPR001238 DNA-binding, RecF PAJ_RS17955 IPR003395 RecF/RecN/SMC, N-terminal PAJ_RS17955 IPR018078 DNA-binding, RecF, conserved site PAJ_RS17955 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17960 IPR001001 DNA polymerase III, beta chain PAJ_RS17960 IPR022634 DNA polymerase III, beta chain, N-terminal PAJ_RS17960 IPR022635 DNA polymerase III, beta chain, C-terminal PAJ_RS17960 IPR022637 DNA polymerase III, beta chain, central PAJ_RS17965 IPR001957 Chromosomal replication control, initiator DnaA PAJ_RS17965 IPR003593 AAA+ ATPase domain PAJ_RS17965 IPR010921 Trp repressor/replication initiator PAJ_RS17965 IPR013159 Chromosomal replication initiator, DnaA C-terminal PAJ_RS17965 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) PAJ_RS17965 IPR018312 Chromosomal replication control, initiator DnaA, conserved site PAJ_RS17965 IPR020591 Chromosomal replication control, initiator DnaA-like PAJ_RS17965 IPR024633 DnaA N-terminal domain PAJ_RS17965 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17975 IPR000100 Ribonuclease P PAJ_RS17975 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAJ_RS17975 IPR020539 Ribonuclease P, conserved site PAJ_RS17975 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS17980 IPR001708 Membrane insertase OXA1/ALB3/YidC PAJ_RS17980 IPR019998 Membrane insertase YidC PAJ_RS17980 IPR028053 Membrane insertase YidC, N-terminal PAJ_RS17980 IPR028055 Membrane insertase YidC/Oxa1, C-terminal PAJ_RS17985 IPR004520 tRNA modification GTPase MnmE PAJ_RS17985 IPR005225 Small GTP-binding protein domain PAJ_RS17985 IPR006073 GTP binding domain PAJ_RS17985 IPR018948 GTP-binding protein TrmE, N-terminal PAJ_RS17985 IPR025867 tRNA modification GTPase MnmE C-terminal domain PAJ_RS17985 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 PAJ_RS17985 IPR027368 tRNA modification GTPase MnmE domain 2 PAJ_RS17985 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS17990 IPR000415 Nitroreductase-like PAJ_RS17990 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE PAJ_RS17990 IPR029479 Nitroreductase PAJ_RS17995 IPR008278 4'-phosphopantetheinyl transferase superfamily PAJ_RS18000 IPR006043 Xanthine/uracil/vitamin C permease PAJ_RS18000 IPR026033 Purine permease PbuG-like PAJ_RS18000 IPR029940 PAJ_RS18000 PAJ_RS18005 IPR006439 HAD hydrolase, subfamily IA PAJ_RS18005 IPR023198 Phosphoglycolate phosphatase, domain 2 PAJ_RS18005 IPR023214 HAD-like domain PAJ_RS18010 IPR002656 Acyltransferase 3 PAJ_RS18010 IPR032905 PAJ_RS18010 PAJ_RS18015 IPR002310 Glycine-tRNA ligase, alpha subunit PAJ_RS18020 IPR008909 DALR anticodon binding PAJ_RS18020 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding PAJ_RS18020 IPR015944 Glycine-tRNA ligase, beta subunit PAJ_RS18025 IPR010583 MltA-interacting MipA PAJ_RS18030 IPR000758 Virulence-related outer membrane protein PAJ_RS18030 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel PAJ_RS18035 IPR004045 Glutathione S-transferase, N-terminal PAJ_RS18035 IPR004046 Glutathione S-transferase, C-terminal PAJ_RS18035 IPR010987 Glutathione S-transferase, C-terminal-like PAJ_RS18035 IPR012336 Thioredoxin-like fold PAJ_RS18040 IPR006452 Formate dehydrogenase accessory protein PAJ_RS18040 IPR024064 FdhE-like PAJ_RS18050 IPR003786 Protein FdhD PAJ_RS18050 IPR016193 Cytidine deaminase-like PAJ_RS18055 IPR001189 Manganese/iron superoxide dismutase PAJ_RS18055 IPR019831 Manganese/iron superoxide dismutase, N-terminal PAJ_RS18055 IPR019832 Manganese/iron superoxide dismutase, C-terminal PAJ_RS18055 IPR019833 Manganese/iron superoxide dismutase, binding site PAJ_RS18060 IPR007488 Protein of unknown function DUF535 PAJ_RS18070 IPR007761 Mannitol repressor PAJ_RS18075 IPR000669 Mannitol dehydrogenase PAJ_RS18075 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS18075 IPR013118 Mannitol dehydrogenase, C-terminal PAJ_RS18075 IPR013131 Mannitol dehydrogenase, N-terminal PAJ_RS18075 IPR013328 Dehydrogenase, multihelical PAJ_RS18075 IPR016040 NAD(P)-binding domain PAJ_RS18075 IPR023027 Mannitol dehydrogenase, conserved site PAJ_RS18075 IPR023028 Mannitol-1-phosphate 5-dehydrogenase PAJ_RS18080 IPR002178 PTS EIIA type-2 domain PAJ_RS18080 IPR003352 Phosphotransferase system, EIIC PAJ_RS18080 IPR003501 Phosphotransferase system, EIIB component, type 2/3 PAJ_RS18080 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC PAJ_RS18080 IPR016152 Phosphotransferase/anion transporter PAJ_RS18080 IPR029503 Phosphotransferase system EIIB component, mannitol-specific PAJ_RS18085 IPR021413 Protein of unknown function DUF3053 PAJ_RS18095 IPR001387 Cro/C1-type helix-turn-helix domain PAJ_RS18095 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS18100 IPR002091 Aromatic amino acid permease PAJ_RS18100 IPR013059 Tryptophan/tyrosine transporter PAJ_RS18100 IPR013061 Tryptophan/tryrosine permease, conserved site PAJ_RS18100 IPR018227 Tryptophan/tyrosine permease PAJ_RS18105 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase PAJ_RS18105 IPR011166 Beta-eliminating lyase family PAJ_RS18105 IPR013440 Tryptophanase PAJ_RS18105 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS18105 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS18105 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS18105 IPR018176 Tryptophanase, conserved site PAJ_RS18110 IPR003607 HD/PDEase domain PAJ_RS18115 IPR000835 MarR-type HTH domain PAJ_RS18115 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS18120 IPR003718 OsmC/Ohr family PAJ_RS18120 IPR015946 K homology domain-like, alpha/beta PAJ_RS18120 IPR019953 Organic hydroperoxide resistance protein famiy PAJ_RS18125 IPR000917 Sulfatase PAJ_RS18125 IPR012549 Domain of unknown function DUF1705 PAJ_RS18125 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha PAJ_RS18125 IPR017850 Alkaline-phosphatase-like, core domain PAJ_RS18140 IPR000914 Bacterial extracellular solute-binding protein, family 5 PAJ_RS18140 IPR030678 PAJ_RS18140 PAJ_RS18145 IPR000515 MetI-like domain PAJ_RS18150 IPR000515 MetI-like domain PAJ_RS18150 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PAJ_RS18155 IPR003439 ABC transporter-like PAJ_RS18155 IPR003593 AAA+ ATPase domain PAJ_RS18155 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PAJ_RS18155 IPR017871 ABC transporter, conserved site PAJ_RS18155 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS18160 IPR003439 ABC transporter-like PAJ_RS18160 IPR003593 AAA+ ATPase domain PAJ_RS18160 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal PAJ_RS18160 IPR017871 ABC transporter, conserved site PAJ_RS18160 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS18170 IPR031484 PAJ_RS18170 PAJ_RS18175 IPR017746 Cellulose synthase operon protein YhjQ PAJ_RS18175 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS18180 IPR001173 Glycosyltransferase 2-like PAJ_RS18180 IPR003919 Cellulose synthase, subunit A PAJ_RS18180 IPR005150 Cellulose synthase PAJ_RS18180 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS18185 IPR003920 Cellulose synthase, subunit B PAJ_RS18185 IPR018513 Cellulose synthase BcsB, bacterial PAJ_RS18190 IPR003921 Cellulose synthase, subunit C PAJ_RS18190 IPR008410 Cellulose synthase operon C, C-terminal PAJ_RS18190 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel PAJ_RS18190 IPR011990 Tetratricopeptide-like helical domain PAJ_RS18190 IPR019734 Tetratricopeptide repeat PAJ_RS18195 IPR022798 Cellulose synthase subunit D, bacterial PAJ_RS18200 IPR002037 Glycoside hydrolase, family 8 PAJ_RS18200 IPR008928 Six-hairpin glycosidase-like PAJ_RS18200 IPR012341 Six-hairpin glycosidase PAJ_RS18205 IPR000160 GGDEF domain PAJ_RS18205 IPR001633 EAL domain PAJ_RS18205 IPR003660 HAMP linker domain PAJ_RS18205 IPR029787 Nucleotide cyclase PAJ_RS18205 IPR033419 PAJ_RS18205 PAJ_RS18210 IPR001991 Sodium:dicarboxylate symporter PAJ_RS18210 IPR018107 Sodium:dicarboxylate symporter, conserved site PAJ_RS18210 IPR023954 C4-dicarboxylate transport protein PAJ_RS18220 IPR007863 Peptidase M16, C-terminal domain PAJ_RS18220 IPR011237 Peptidase M16 domain PAJ_RS18220 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like PAJ_RS18220 IPR011765 Peptidase M16, N-terminal PAJ_RS18225 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain PAJ_RS18225 IPR029058 Alpha/Beta hydrolase fold PAJ_RS18230 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAJ_RS18230 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAJ_RS18235 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PAJ_RS18235 IPR011611 Carbohydrate kinase PfkB PAJ_RS18235 IPR029056 Ribokinase-like PAJ_RS18240 IPR001633 EAL domain PAJ_RS18245 IPR007844 AsmA PAJ_RS18250 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type PAJ_RS18255 IPR000212 DNA helicase, UvrD/REP type PAJ_RS18255 IPR005752 DNA helicase, ATP-dependent, RepA type PAJ_RS18255 IPR013986 DExx box DNA helicase domain PAJ_RS18255 IPR014016 UvrD-like Helicase, ATP-binding domain PAJ_RS18255 IPR014017 DNA helicase, UvrD-like, C-terminal PAJ_RS18255 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS18260 IPR003695 Ppx/GppA phosphatase PAJ_RS18260 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase PAJ_RS18260 IPR030673 PAJ_RS18260 PAJ_RS18265 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site PAJ_RS18265 IPR001650 Helicase, C-terminal PAJ_RS18265 IPR011545 DEAD/DEAH box helicase domain PAJ_RS18265 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS18265 IPR023554 RNA helicase, ATP-dependent, RhlB-type PAJ_RS18265 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS18270 IPR005746 Thioredoxin PAJ_RS18270 IPR012336 Thioredoxin-like fold PAJ_RS18270 IPR013766 Thioredoxin domain PAJ_RS18270 IPR017937 Thioredoxin, conserved site PAJ_RS18275 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain PAJ_RS18275 IPR003593 AAA+ ATPase domain PAJ_RS18275 IPR004665 Transcription termination factor Rho PAJ_RS18275 IPR011112 Rho termination factor, N-terminal PAJ_RS18275 IPR011113 Rho termination factor, RNA-binding PAJ_RS18275 IPR011129 Cold shock protein PAJ_RS18275 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS18275 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS18280 IPR000715 Glycosyl transferase, family 4 PAJ_RS18280 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase PAJ_RS18285 IPR003856 Lipopolysaccharide biosynthesis PAJ_RS18285 IPR032895 PAJ_RS18285 PAJ_RS18290 IPR003331 UDP-N-acetylglucosamine 2-epimerase PAJ_RS18290 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type PAJ_RS18290 IPR032892 PAJ_RS18290 PAJ_RS18295 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal PAJ_RS18295 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS18295 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation PAJ_RS18295 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal PAJ_RS18295 IPR016040 NAD(P)-binding domain PAJ_RS18295 IPR017476 UDP-glucose/GDP-mannose dehydrogenase PAJ_RS18295 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase PAJ_RS18295 IPR032891 PAJ_RS18295 PAJ_RS18300 IPR005888 dTDP-glucose 4,6-dehydratase PAJ_RS18300 IPR016040 NAD(P)-binding domain PAJ_RS18305 IPR005835 Nucleotidyl transferase PAJ_RS18305 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form PAJ_RS18305 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS18310 IPR000182 GNAT domain PAJ_RS18310 IPR012752 TDP-D-fucosamine acetyltransferase WecD PAJ_RS18310 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS18315 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PAJ_RS18315 IPR012749 TDP-4-keto-6-deoxy-D-glucose transaminase PAJ_RS18315 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS18315 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS18315 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS18315 IPR032894 PAJ_RS18315 PAJ_RS18320 IPR002797 Polysaccharide biosynthesis protein PAJ_RS18320 IPR032896 PAJ_RS18320 PAJ_RS18325 IPR009993 4-alpha-L-fucosyltransferase PAJ_RS18335 IPR004629 Glycosyl transferase WecB/TagA/CpsF PAJ_RS18335 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase PAJ_RS18370 IPR007470 HemX PAJ_RS18375 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase PAJ_RS18380 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase PAJ_RS18380 IPR022417 Porphobilinogen deaminase, N-terminal PAJ_RS18380 IPR022418 Porphobilinogen deaminase, C-terminal PAJ_RS18380 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site PAJ_RS18385 IPR000274 Adenylate cyclase, class-I PAJ_RS18385 IPR024685 Adenylate cyclase class-I, N-terminal domain PAJ_RS18385 IPR024686 Adenylate cyclase class-I, conserved site PAJ_RS18390 IPR001653 Diaminopimelate epimerase, DapF PAJ_RS18390 IPR018510 Diaminopimelate epimerase, active site PAJ_RS18395 IPR007435 Protein of unknown function DUF484 PAJ_RS18400 IPR002104 Integrase, catalytic PAJ_RS18400 IPR004107 Integrase, SAM-like, N-terminal PAJ_RS18400 IPR010998 Integrase, Lambda-type, N-terminal PAJ_RS18400 IPR011010 DNA breaking-rejoining enzyme, catalytic core PAJ_RS18400 IPR011931 Tyrosine recombinase XerC PAJ_RS18400 IPR013762 Integrase-like, catalytic core PAJ_RS18400 IPR023009 Tyrosine recombinase XerC/XerD PAJ_RS18400 IPR023109 Integrase/recombinase, N-terminal PAJ_RS18405 IPR006439 HAD hydrolase, subfamily IA PAJ_RS18405 IPR023214 HAD-like domain PAJ_RS18410 IPR000212 DNA helicase, UvrD/REP type PAJ_RS18410 IPR005753 DNA helicase, ATP-dependent, UvrD type PAJ_RS18410 IPR013986 DExx box DNA helicase domain PAJ_RS18410 IPR014016 UvrD-like Helicase, ATP-binding domain PAJ_RS18410 IPR014017 DNA helicase, UvrD-like, C-terminal PAJ_RS18410 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS18415 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB PAJ_RS18415 IPR004488 Magnesium/cobalt transport protein CorA PAJ_RS18420 IPR007820 AbrB family PAJ_RS18420 IPR017516 AbrB duplication PAJ_RS18425 IPR000620 Drug/metabolite transporter PAJ_RS18425 IPR004626 RarD protein PAJ_RS18430 IPR002577 Helix-turn-helix, HxlR type PAJ_RS18430 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS18435 IPR009959 Polyketide cyclase SnoaL-like domain PAJ_RS18435 IPR032710 PAJ_RS18435 PAJ_RS18440 IPR003736 Phenylacetic acid degradation-related domain PAJ_RS18440 IPR006683 Thioesterase superfamily PAJ_RS18440 IPR029069 HotDog domain PAJ_RS18450 IPR001650 Helicase, C-terminal PAJ_RS18450 IPR002121 HRDC domain PAJ_RS18450 IPR004589 DNA helicase, ATP-dependent, RecQ type PAJ_RS18450 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial PAJ_RS18450 IPR010997 HRDC-like PAJ_RS18450 IPR011545 DEAD/DEAH box helicase domain PAJ_RS18450 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS18450 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS18450 IPR018982 RQC domain PAJ_RS18450 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS18450 IPR032284 PAJ_RS18450 PAJ_RS18455 IPR001123 Lysine-type exporter protein (LYSE/YGGA) PAJ_RS18455 IPR004778 Homoserine/Threonine efflux protein PAJ_RS18460 IPR001123 Lysine-type exporter protein (LYSE/YGGA) PAJ_RS18465 IPR022742 Putative lysophospholipase PAJ_RS18465 IPR029058 Alpha/Beta hydrolase fold PAJ_RS18470 IPR000150 Cof protein PAJ_RS18470 IPR006379 HAD-superfamily hydrolase, subfamily IIB PAJ_RS18470 IPR023214 HAD-like domain PAJ_RS18475 IPR000849 Sugar phosphate transporter PAJ_RS18475 IPR005267 Glycerol-3-phosphate transporter PAJ_RS18475 IPR011701 Major facilitator superfamily PAJ_RS18475 IPR020846 Major facilitator superfamily domain PAJ_RS18475 IPR021159 Glycerate/sugar phosphate transporter, conserved site PAJ_RS18480 IPR000620 Drug/metabolite transporter PAJ_RS18480 IPR004779 Carboxylate/Amino Acid/Amine Transporter PAJ_RS18485 IPR009921 Domain of unknown function DUF1456 PAJ_RS18490 IPR000847 Transcription regulator HTH, LysR PAJ_RS18490 IPR005119 LysR, substrate-binding PAJ_RS18490 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS18495 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal PAJ_RS18495 IPR006276 Cobalamin-independent methionine synthase PAJ_RS18495 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal PAJ_RS18500 IPR002925 Dienelactone hydrolase PAJ_RS18500 IPR029058 Alpha/Beta hydrolase fold PAJ_RS18505 IPR000845 Nucleoside phosphorylase domain PAJ_RS18505 IPR010058 Uridine phosphorylase PAJ_RS18505 IPR018016 Nucleoside phosphorylase, conserved site PAJ_RS18505 IPR018017 Nucleoside phosphorylase PAJ_RS18510 IPR003798 DNA recombination RmuC PAJ_RS18515 IPR004033 UbiE/COQ5 methyltransferase PAJ_RS18515 IPR023576 UbiE/COQ5 methyltransferase, conserved site PAJ_RS18515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS18520 IPR003033 SCP2 sterol-binding domain PAJ_RS18525 IPR004147 UbiB domain PAJ_RS18525 IPR010232 Probable protein kinase UbiB PAJ_RS18525 IPR011009 Protein kinase-like domain PAJ_RS18530 IPR003369 Sec-independent protein translocase protein TatA/B/E PAJ_RS18530 IPR006312 Sec-independent protein translocase protein TatA/E PAJ_RS18535 IPR003998 Twin-arginine translocation protein TatB-like PAJ_RS18535 IPR018448 Twin-arginine translocation protein TatB PAJ_RS18540 IPR002033 Sec-independent periplasmic protein translocase TatC PAJ_RS18540 IPR019820 Sec-independent periplasmic protein translocase, conserved site PAJ_RS18545 IPR001130 TatD family PAJ_RS18545 IPR018228 Deoxyribonuclease, TatD-related, conserved site PAJ_RS18545 IPR024918 Tat-linked quality control protein TatD PAJ_RS18545 IPR032466 PAJ_RS18545 PAJ_RS18550 IPR006645 NusG, N-terminal PAJ_RS18550 IPR010215 Transcription antitermination protein RfaH PAJ_RS18555 IPR002830 UbiD decarboxylyase family PAJ_RS18555 IPR012349 FMN-binding split barrel PAJ_RS18555 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase PAJ_RS18560 IPR001221 Phenol hydroxylase reductase PAJ_RS18560 IPR001433 Oxidoreductase FAD/NAD(P)-binding PAJ_RS18560 IPR008333 Oxidoreductase, FAD-binding domain PAJ_RS18560 IPR017938 Riboflavin synthase-like beta-barrel PAJ_RS18565 IPR002155 Thiolase PAJ_RS18565 IPR012805 Acetyl-CoA C-acyltransferase FadA PAJ_RS18565 IPR016039 Thiolase-like PAJ_RS18565 IPR020610 Thiolase, active site PAJ_RS18565 IPR020613 Thiolase, conserved site PAJ_RS18565 IPR020615 Thiolase, acyl-enzyme intermediate active site PAJ_RS18565 IPR020616 Thiolase, N-terminal PAJ_RS18565 IPR020617 Thiolase, C-terminal PAJ_RS18570 IPR001753 Crotonase superfamily PAJ_RS18570 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal PAJ_RS18570 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding PAJ_RS18570 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site PAJ_RS18570 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like PAJ_RS18570 IPR012799 Fatty oxidation complex, alpha subunit FadB PAJ_RS18570 IPR013328 Dehydrogenase, multihelical PAJ_RS18570 IPR016040 NAD(P)-binding domain PAJ_RS18570 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site PAJ_RS18570 IPR029045 ClpP/crotonase-like domain PAJ_RS18575 IPR000994 Peptidase M24, structural domain PAJ_RS18575 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site PAJ_RS18575 IPR022846 Xaa-Pro dipeptidase PAJ_RS18580 IPR000640 Translation elongation factor EFG, V domain PAJ_RS18580 IPR001498 Impact, N-terminal PAJ_RS18580 IPR009022 Elongation factor G, III-V domain PAJ_RS18580 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal PAJ_RS18580 IPR015796 Impact family, bacterial/archaeal PAJ_RS18580 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS18580 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site PAJ_RS18580 IPR023582 Impact family PAJ_RS18585 IPR003445 Cation transporter PAJ_RS18585 IPR004772 Potassium uptake protein TrkH family PAJ_RS18590 IPR001226 Flavodoxin, conserved site PAJ_RS18590 IPR026816 Flavodoxin domain PAJ_RS18590 IPR029039 Flavoprotein-like PAJ_RS18615 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase PAJ_RS18615 IPR006094 FAD linked oxidase, N-terminal PAJ_RS18615 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal PAJ_RS18615 IPR016166 FAD-binding, type 2 PAJ_RS18615 IPR016167 FAD-binding, type 2, subdomain 1 PAJ_RS18615 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 PAJ_RS18620 IPR003142 Biotin protein ligase, C-terminal PAJ_RS18620 IPR004143 Biotin/lipoate A/B protein ligase PAJ_RS18620 IPR004408 Biotin--acetyl-CoA-carboxylase ligase PAJ_RS18620 IPR004409 Biotin operon repressor, helix-turn-helix domain PAJ_RS18620 IPR008988 Transcriptional repressor, C-terminal PAJ_RS18620 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS18620 IPR013196 Helix-turn-helix, type 11 PAJ_RS18620 IPR030855 PAJ_RS18620 PAJ_RS18625 IPR004566 Bacterial pantothenate kinase PAJ_RS18625 IPR006083 Phosphoribulokinase/uridine kinase PAJ_RS18625 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS18650 IPR000795 Elongation factor, GTP-binding domain PAJ_RS18650 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PAJ_RS18650 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 PAJ_RS18650 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle PAJ_RS18650 IPR005225 Small GTP-binding protein domain PAJ_RS18650 IPR009000 Translation protein, beta-barrel domain PAJ_RS18650 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PAJ_RS18650 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS18650 IPR031157 PAJ_RS18650 PAJ_RS18655 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit PAJ_RS18655 IPR005807 SecE subunit of protein translocation complex PAJ_RS18655 IPR022943 Preprotein translocase subunit SecE PAJ_RS18660 IPR001062 Transcription antitermination protein, NusG PAJ_RS18660 IPR005824 KOW PAJ_RS18660 IPR006645 NusG, N-terminal PAJ_RS18660 IPR008991 Translation protein SH3-like domain PAJ_RS18660 IPR014722 Ribosomal protein L2 domain 2 PAJ_RS18660 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site PAJ_RS18665 IPR000911 Ribosomal protein L11/L12 PAJ_RS18665 IPR006519 Ribosomal protein L11, bacterial-type PAJ_RS18665 IPR020783 Ribosomal protein L11, C-terminal PAJ_RS18665 IPR020784 Ribosomal protein L11, N-terminal PAJ_RS18665 IPR020785 Ribosomal protein L11, conserved site PAJ_RS18670 IPR002143 Ribosomal protein L1 PAJ_RS18670 IPR005878 Ribosomal protein L1, bacterial-type PAJ_RS18670 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich PAJ_RS18670 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich PAJ_RS18670 IPR023673 Ribosomal protein L1, conserved site PAJ_RS18670 IPR023674 Ribosomal protein L1-like PAJ_RS18670 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein PAJ_RS18675 IPR001790 Ribosomal protein L10/acidic P0 PAJ_RS18675 IPR002363 Ribosomal protein L10, eubacterial, conserved site PAJ_RS18675 IPR022973 Ribosomal protein L10 PAJ_RS18680 IPR000206 Ribosomal protein L7/L12 PAJ_RS18680 IPR008932 Ribosomal protein L7/L12, oligomerisation PAJ_RS18680 IPR013823 Ribosomal protein L7/L12, C-terminal PAJ_RS18680 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PAJ_RS18685 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 PAJ_RS18685 IPR007121 RNA polymerase, beta subunit, conserved site PAJ_RS18685 IPR007641 RNA polymerase Rpb2, domain 7 PAJ_RS18685 IPR007642 RNA polymerase Rpb2, domain 2 PAJ_RS18685 IPR007644 RNA polymerase, beta subunit, protrusion PAJ_RS18685 IPR007645 RNA polymerase Rpb2, domain 3 PAJ_RS18685 IPR010243 DNA-directed RNA polymerase, beta subunit PAJ_RS18685 IPR014724 RNA polymerase Rpb2, OB-fold PAJ_RS18685 IPR015712 DNA-directed RNA polymerase, subunit 2 PAJ_RS18685 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain PAJ_RS18690 IPR000722 RNA polymerase, alpha subunit PAJ_RS18690 IPR006592 RNA polymerase, N-terminal PAJ_RS18690 IPR007066 RNA polymerase Rpb1, domain 3 PAJ_RS18690 IPR007080 RNA polymerase Rpb1, domain 1 PAJ_RS18690 IPR007081 RNA polymerase Rpb1, domain 5 PAJ_RS18690 IPR007083 RNA polymerase Rpb1, domain 4 PAJ_RS18690 IPR012754 DNA-directed RNA polymerase, subunit beta-prime PAJ_RS18695 IPR000524 Transcription regulator HTH, GntR PAJ_RS18695 IPR004839 Aminotransferase, class I/classII PAJ_RS18695 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS18695 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS18695 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS18695 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS18705 IPR002817 Thiamine biosynthesis protein ThiC PAJ_RS18705 IPR025747 ThiC-associated domain PAJ_RS18710 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ PAJ_RS18710 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd PAJ_RS18715 IPR000086 NUDIX hydrolase domain PAJ_RS18715 IPR015376 Zinc ribbon, NADH pyrophosphatase PAJ_RS18715 IPR015797 NUDIX hydrolase domain-like PAJ_RS18715 IPR020084 NUDIX hydrolase, conserved site PAJ_RS18715 IPR022925 NADH pyrophosphatase NudC PAJ_RS18720 IPR000257 Uroporphyrinogen decarboxylase (URO-D) PAJ_RS18720 IPR006361 Uroporphyrinogen decarboxylase HemE PAJ_RS18725 IPR007581 Endonuclease V PAJ_RS18730 IPR007338 Protein of unknown function DUF416 PAJ_RS18730 IPR023381 YP001051499.1-like domain PAJ_RS18735 IPR000119 Histone-like bacterial DNA-binding protein PAJ_RS18735 IPR010992 Integration host factor (IHF)-like DNA-binding domain PAJ_RS18735 IPR020816 Histone-like DNA-binding protein, conserved site PAJ_RS18740 IPR010858 Protein of unknown function DUF1481 PAJ_RS18745 IPR000115 Phosphoribosylglycinamide synthetase PAJ_RS18745 IPR011054 Rudiment single hybrid motif PAJ_RS18745 IPR013815 ATP-grasp fold, subdomain 1 PAJ_RS18745 IPR013816 ATP-grasp fold, subdomain 2 PAJ_RS18745 IPR016185 Pre-ATP-grasp domain PAJ_RS18745 IPR020559 Phosphoribosylglycinamide synthetase, conserved site PAJ_RS18745 IPR020560 Phosphoribosylglycinamide synthetase, C-domain PAJ_RS18745 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PAJ_RS18745 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal PAJ_RS18750 IPR002695 AICARFT/IMPCHase bienzyme PAJ_RS18750 IPR011607 Methylglyoxal synthase-like domain PAJ_RS18750 IPR016193 Cytidine deaminase-like PAJ_RS18750 IPR024051 AICAR transformylase domain PAJ_RS18780 IPR010854 Domain of unknown function DUF1471 PAJ_RS18780 IPR025543 Dodecin-like PAJ_RS18785 IPR002491 ABC transporter periplasmic binding domain PAJ_RS18795 IPR005697 Homoserine O-succinyltransferase PAJ_RS18795 IPR029062 Class I glutamine amidotransferase-like PAJ_RS18800 IPR001465 Malate synthase PAJ_RS18800 IPR006252 Malate synthase A PAJ_RS18800 IPR011076 Malate synthase-like PAJ_RS18800 IPR019830 Malate synthase, conserved site PAJ_RS18805 IPR006254 Isocitrate lyase PAJ_RS18805 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain PAJ_RS18805 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site PAJ_RS18810 IPR010452 Isocitrate dehydrogenase kinasephosphatase PAJ_RS18815 IPR000524 Transcription regulator HTH, GntR PAJ_RS18815 IPR008920 Transcription regulator FadR/GntR, C-terminal PAJ_RS18815 IPR011711 GntR, C-terminal PAJ_RS18815 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS18820 IPR023614 Porin domain PAJ_RS18825 IPR020846 Major facilitator superfamily domain PAJ_RS18830 IPR001466 Beta-lactamase-related PAJ_RS18830 IPR012338 Beta-lactamase/transpeptidase-like PAJ_RS18835 IPR005471 Transcription regulator IclR, N-terminal PAJ_RS18835 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS18835 IPR014757 Transcription regulator IclR, C-terminal PAJ_RS18835 IPR029016 GAF domain-like PAJ_RS18840 IPR000489 Pterin-binding PAJ_RS18840 IPR003726 Homocysteine S-methyltransferase PAJ_RS18840 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain PAJ_RS18840 IPR004223 Vitamin B12-dependent methionine synthase, activation domain PAJ_RS18840 IPR006158 Cobalamin (vitamin B12)-binding domain PAJ_RS18840 IPR011005 Dihydropteroate synthase-like PAJ_RS18840 IPR011822 Cobalamin-dependent methionine synthase PAJ_RS18845 IPR010344 Protein of unknown function DUF940 PAJ_RS18850 IPR010425 Domain of unknown function DUF1017 PAJ_RS18855 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB PAJ_RS18855 IPR023373 YmcC-like domain PAJ_RS18860 IPR025858 Exopolysaccharide production protein YjbE PAJ_RS18865 IPR001672 Phosphoglucose isomerase (PGI) PAJ_RS18865 IPR018189 Phosphoglucose isomerase, conserved site PAJ_RS18865 IPR023096 Phosphoglucose isomerase, C-terminal PAJ_RS18870 IPR001048 Aspartate/glutamate/uridylate kinase PAJ_RS18870 IPR001341 Aspartate kinase domain PAJ_RS18870 IPR005260 Aspartate kinase, monofunctional class PAJ_RS18870 IPR018042 Aspartate kinase, conserved site PAJ_RS18875 IPR002657 Bile acid:sodium symporter PAJ_RS18880 IPR003841 Sodium-dependent phosphate transport protein PAJ_RS18880 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein PAJ_RS18880 IPR026022 PhoU domain PAJ_RS18885 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase PAJ_RS18885 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha PAJ_RS18885 IPR017850 Alkaline-phosphatase-like, core domain PAJ_RS18890 IPR009315 Phosphate-starvation-induced PsiE PAJ_RS18890 IPR020948 Phosphate-starvation-induced PsiE-like PAJ_RS18895 IPR007440 Chorismate--pyruvate lyase PAJ_RS18895 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain PAJ_RS18900 IPR000537 UbiA prenyltransferase family PAJ_RS18900 IPR006370 4-hydroxybenzoate polyprenyl transferase PAJ_RS18900 IPR031103 PAJ_RS18900 PAJ_RS18905 IPR002123 Phospholipid/glycerol acyltransferase PAJ_RS18905 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase PAJ_RS18905 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB PAJ_RS18910 IPR000829 Diacylglycerol kinase, prokaryotic PAJ_RS18915 IPR006197 Peptidase S24, LexA-like PAJ_RS18915 IPR006199 LexA repressor, DNA-binding domain PAJ_RS18915 IPR006200 LexA repressor PAJ_RS18915 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS18915 IPR015927 Peptidase S24/S26A/S26B/S26C PAJ_RS18915 IPR019759 Peptidase S24/S26A/S26B PAJ_RS18915 IPR028360 Peptidase S24/S26, beta-ribbon domain PAJ_RS18920 IPR002528 Multi antimicrobial extrusion protein PAJ_RS18925 IPR008462 CsbD-like PAJ_RS18925 IPR026042 Stress response protein YjbJ PAJ_RS18930 IPR002481 Ferric-uptake regulator PAJ_RS18930 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS18935 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel PAJ_RS18935 IPR032811 PAJ_RS18935 PAJ_RS18940 IPR001269 tRNA-dihydrouridine synthase PAJ_RS18940 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN PAJ_RS18940 IPR013785 Aldolase-type TIM barrel PAJ_RS18940 IPR018517 tRNA-dihydrouridine synthase, conserved site PAJ_RS18945 IPR014318 Phage shock protein, PspG PAJ_RS18950 IPR002085 Alcohol dehydrogenase superfamily, zinc-type PAJ_RS18950 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site PAJ_RS18950 IPR011032 GroES (chaperonin 10)-like PAJ_RS18950 IPR013149 Alcohol dehydrogenase, C-terminal PAJ_RS18950 IPR013154 Alcohol dehydrogenase GroES-like PAJ_RS18950 IPR016040 NAD(P)-binding domain PAJ_RS18950 IPR020843 Polyketide synthase, enoylreductase PAJ_RS18955 IPR003593 AAA+ ATPase domain PAJ_RS18955 IPR007692 DNA helicase, DnaB type PAJ_RS18955 IPR007693 DNA helicase, DnaB-like, N-terminal PAJ_RS18955 IPR007694 DNA helicase, DnaB-like, C-terminal PAJ_RS18955 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PAJ_RS18955 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS18960 IPR000485 AsnC-type HTH domain PAJ_RS18960 IPR011008 Dimeric alpha-beta barrel PAJ_RS18960 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS18960 IPR019887 Transcription regulator AsnC-type, C-terminal PAJ_RS18960 IPR019888 Transcription regulator AsnC-type PAJ_RS18965 IPR003740 Membrane Protein of unknown function DUF161 PAJ_RS18970 IPR000796 Aspartate/other aminotransferase PAJ_RS18970 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site PAJ_RS18970 IPR004839 Aminotransferase, class I/classII PAJ_RS18970 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS18970 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS18975 IPR001602 Uncharacterised protein family UPF0047 PAJ_RS18980 IPR007351 Uncharacterised protein YjbR PAJ_RS18985 IPR002085 Alcohol dehydrogenase superfamily, zinc-type PAJ_RS18985 IPR011032 GroES (chaperonin 10)-like PAJ_RS18985 IPR013149 Alcohol dehydrogenase, C-terminal PAJ_RS18985 IPR013154 Alcohol dehydrogenase GroES-like PAJ_RS18985 IPR016040 NAD(P)-binding domain PAJ_RS18985 IPR020843 Polyketide synthase, enoylreductase PAJ_RS18985 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PAJ_RS18990 IPR023811 Conserved hypothetical protein CHP04076 PAJ_RS18995 IPR003439 ABC transporter-like PAJ_RS18995 IPR004602 UvrABC system subunit A PAJ_RS18995 IPR013815 ATP-grasp fold, subdomain 1 PAJ_RS18995 IPR017871 ABC transporter, conserved site PAJ_RS18995 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS19000 IPR000424 Primosome PriB/single-strand DNA-binding PAJ_RS19000 IPR011344 Single-stranded DNA-binding protein PAJ_RS19000 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS19005 IPR009784 Protein of unknown function DUF1349 PAJ_RS19005 IPR013320 Concanavalin A-like lectin/glucanase, subgroup PAJ_RS19005 IPR015987 Uncharacterised conserved protein UCP022704 PAJ_RS19010 IPR000868 Isochorismatase-like PAJ_RS19015 IPR003313 AraC-type arabinose-binding/dimerisation domain PAJ_RS19015 IPR009057 Homeodomain-like PAJ_RS19015 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS19015 IPR018062 HTH domain AraC-type, conserved site PAJ_RS19025 IPR002797 Polysaccharide biosynthesis protein PAJ_RS19030 IPR029465 TupA-like ATPgrasp protein PAJ_RS19035 IPR016958 Uncharacterised conserved protein UCP030798 PAJ_RS19040 IPR009057 Homeodomain-like PAJ_RS19040 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS19040 IPR018062 HTH domain AraC-type, conserved site PAJ_RS19040 IPR020449 Transcription regulator HTH, AraC- type PAJ_RS19045 IPR000551 MerR-type HTH domain PAJ_RS19045 IPR009061 DNA binding domain, putative PAJ_RS19045 IPR010211 Redox-sensitive transcriptional activator SoxR PAJ_RS19045 IPR015358 Transcription regulator MerR, DNA binding PAJ_RS19050 IPR004045 Glutathione S-transferase, N-terminal PAJ_RS19050 IPR004046 Glutathione S-transferase, C-terminal PAJ_RS19050 IPR010987 Glutathione S-transferase, C-terminal-like PAJ_RS19050 IPR012336 Thioredoxin-like fold PAJ_RS19055 IPR006043 Xanthine/uracil/vitamin C permease PAJ_RS19060 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria PAJ_RS19060 IPR006153 Cation/H+ exchanger PAJ_RS19060 IPR018422 Cation/H+ exchanger, CPA1 family PAJ_RS19065 IPR000847 Transcription regulator HTH, LysR PAJ_RS19065 IPR005119 LysR, substrate-binding PAJ_RS19065 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS19070 IPR005538 LrgA/CidA family PAJ_RS19075 IPR007300 CidB/LrgB family PAJ_RS19080 IPR009998 YfaZ PAJ_RS19080 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel PAJ_RS19080 IPR023614 Porin domain PAJ_RS19085 IPR001734 Sodium/solute symporter PAJ_RS19085 IPR014083 Cation/acetate symporter ActP PAJ_RS19085 IPR018212 Sodium/solute symporter, conserved site PAJ_RS19090 IPR007436 Protein of unknown function DUF485 PAJ_RS19095 IPR000873 AMP-dependent synthetase/ligase PAJ_RS19095 IPR011904 Acetate-CoA ligase PAJ_RS19095 IPR020845 AMP-binding, conserved site PAJ_RS19095 IPR025110 AMP-binding enzyme C-terminal domain PAJ_RS19095 IPR032387 PAJ_RS19095 PAJ_RS19100 IPR001991 Sodium:dicarboxylate symporter PAJ_RS19100 IPR018107 Sodium:dicarboxylate symporter, conserved site PAJ_RS19100 IPR033380 PAJ_RS19100 PAJ_RS19105 IPR001347 Sugar isomerase (SIS) PAJ_RS19105 IPR005486 Glucokinase regulatory protein, conserved site PAJ_RS19105 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ PAJ_RS19110 IPR001996 Phosphotransferase system, IIB component, type 1 PAJ_RS19110 IPR003352 Phosphotransferase system, EIIC PAJ_RS19110 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site PAJ_RS19115 IPR000014 PAS domain PAJ_RS19115 IPR001610 PAC motif PAJ_RS19115 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS19115 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS19115 IPR013655 PAS fold-3 PAJ_RS19120 IPR003313 AraC-type arabinose-binding/dimerisation domain PAJ_RS19120 IPR009057 Homeodomain-like PAJ_RS19120 IPR011051 RmlC-like cupin domain PAJ_RS19120 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS19120 IPR018062 HTH domain AraC-type, conserved site PAJ_RS19120 IPR032783 PAJ_RS19120 PAJ_RS19125 IPR011701 Major facilitator superfamily PAJ_RS19125 IPR020846 Major facilitator superfamily domain PAJ_RS19130 IPR010854 Domain of unknown function DUF1471 PAJ_RS19130 IPR025543 Dodecin-like PAJ_RS19135 IPR009248 SbmA/BacA-like PAJ_RS19135 IPR011527 ABC transporter type 1, transmembrane domain PAJ_RS19140 IPR027056 Gluconate 2-dehydrogenase subunit 3 PAJ_RS19145 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal PAJ_RS19145 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal PAJ_RS19145 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS19150 IPR008168 Cytochrome c, class IC PAJ_RS19150 IPR009056 Cytochrome c-like domain PAJ_RS19150 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit PAJ_RS19155 IPR005828 General substrate transporter PAJ_RS19155 IPR005829 Sugar transporter, conserved site PAJ_RS19155 IPR020846 Major facilitator superfamily domain PAJ_RS19160 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding PAJ_RS19160 IPR003660 HAMP linker domain PAJ_RS19160 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS19160 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS19165 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PAJ_RS19165 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PAJ_RS19170 IPR003055 Nucleoside-specific channel-forming protein, Tsx PAJ_RS19170 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like PAJ_RS19175 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS19175 IPR003660 HAMP linker domain PAJ_RS19175 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS19180 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS19180 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS19180 IPR011006 CheY-like superfamily PAJ_RS19180 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS19180 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS19185 IPR009057 Homeodomain-like PAJ_RS19185 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS19190 IPR000847 Transcription regulator HTH, LysR PAJ_RS19190 IPR005119 LysR, substrate-binding PAJ_RS19190 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS19195 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG PAJ_RS19195 IPR011701 Major facilitator superfamily PAJ_RS19195 IPR020846 Major facilitator superfamily domain PAJ_RS19200 IPR001479 Quinoprotein dehydrogenase, conserved site PAJ_RS19200 IPR002372 Pyrrolo-quinoline quinone repeat PAJ_RS19200 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily PAJ_RS19200 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related PAJ_RS19200 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat PAJ_RS19200 IPR027295 Quinonprotein alcohol dehydrogenase-like domain PAJ_RS19210 IPR000683 Oxidoreductase, N-terminal PAJ_RS19210 IPR004104 Oxidoreductase, C-terminal PAJ_RS19210 IPR016040 NAD(P)-binding domain PAJ_RS19215 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type PAJ_RS19220 IPR000600 ROK PAJ_RS19220 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS19225 IPR003439 ABC transporter-like PAJ_RS19225 IPR003593 AAA+ ATPase domain PAJ_RS19225 IPR008995 Molybdate/tungstate binding, C-terminal PAJ_RS19225 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS19225 IPR013611 Transport-associated OB, type 2 PAJ_RS19225 IPR017871 ABC transporter, conserved site PAJ_RS19225 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS19230 IPR000182 GNAT domain PAJ_RS19230 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS19240 IPR000515 MetI-like domain PAJ_RS19245 IPR000515 MetI-like domain PAJ_RS19250 IPR000743 Glycoside hydrolase, family 28 PAJ_RS19250 IPR006626 Parallel beta-helix repeat PAJ_RS19250 IPR011050 Pectin lyase fold/virulence factor PAJ_RS19250 IPR012334 Pectin lyase fold PAJ_RS19255 IPR001804 Isocitrate and isopropylmalate dehydrogenases family PAJ_RS19255 IPR011829 Tartrate dehydrogenase PAJ_RS19255 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site PAJ_RS19255 IPR024084 Isopropylmalate dehydrogenase-like domain PAJ_RS19260 IPR000847 Transcription regulator HTH, LysR PAJ_RS19260 IPR005119 LysR, substrate-binding PAJ_RS19260 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS19265 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS19270 IPR010753 Protein of unknown function DUF1330 PAJ_RS19270 IPR011008 Dimeric alpha-beta barrel PAJ_RS19275 IPR004045 Glutathione S-transferase, N-terminal PAJ_RS19275 IPR010987 Glutathione S-transferase, C-terminal-like PAJ_RS19275 IPR012336 Thioredoxin-like fold PAJ_RS19280 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PAJ_RS19280 IPR011611 Carbohydrate kinase PfkB PAJ_RS19280 IPR029056 Ribokinase-like PAJ_RS19285 IPR004199 Beta galactosidase small chain/ domain 5 PAJ_RS19285 IPR006101 Glycoside hydrolase, family 2 PAJ_RS19285 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich PAJ_RS19285 IPR006103 Glycoside hydrolase, family 2, TIM barrel PAJ_RS19285 IPR006104 Glycosyl hydrolases family 2, sugar binding domain PAJ_RS19285 IPR008979 Galactose-binding domain-like PAJ_RS19285 IPR011013 Galactose mutarotase-like domain PAJ_RS19285 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS19285 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain PAJ_RS19285 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup PAJ_RS19285 IPR017853 Glycoside hydrolase, superfamily PAJ_RS19285 IPR023230 Glycoside hydrolase, family 2, conserved site PAJ_RS19285 IPR023232 Glycoside hydrolase, family 2, active site PAJ_RS19285 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase PAJ_RS19285 IPR032312 PAJ_RS19285 PAJ_RS19290 IPR000576 LacY/RafB permease family PAJ_RS19290 IPR018457 LacY/RafB permease family, conserved site PAJ_RS19290 IPR020846 Major facilitator superfamily domain PAJ_RS19300 IPR001996 Phosphotransferase system, IIB component, type 1 PAJ_RS19300 IPR003352 Phosphotransferase system, EIIC PAJ_RS19300 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component PAJ_RS19300 IPR010973 Phosphotransferase system, sucrose-specific IIBC component PAJ_RS19300 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site PAJ_RS19305 IPR001362 Glycoside hydrolase, family 32 PAJ_RS19305 IPR006232 Sucrose-6-phosphate hydrolase PAJ_RS19305 IPR013148 Glycosyl hydrolase family 32, N-terminal PAJ_RS19305 IPR013189 Glycosyl hydrolase family 32, C-terminal PAJ_RS19305 IPR013320 Concanavalin A-like lectin/glucanase, subgroup PAJ_RS19305 IPR018053 Glycoside hydrolase, family 32, active site PAJ_RS19305 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain PAJ_RS19310 IPR000843 Transcription regulator HTH, LacI PAJ_RS19310 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS19310 IPR012781 D-fructose-responsive transcription factor PAJ_RS19310 IPR028082 Periplasmic binding protein-like I PAJ_RS19315 IPR009094 Disulphide bond isomerase, DsbC, N-terminal PAJ_RS19315 IPR012336 Thioredoxin-like fold PAJ_RS19315 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal PAJ_RS19330 IPR001279 Beta-lactamase-like PAJ_RS19330 IPR005939 Beta-lactamase hydrolase-like PAJ_RS19330 IPR029021 Protein-tyrosine phosphatase-like PAJ_RS19335 IPR002781 Transmembrane protein TauE like PAJ_RS19340 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS19345 IPR027396 DsrEFH-like PAJ_RS19350 IPR008729 Phenolic acid decarboxylase, bacterial PAJ_RS19350 IPR011038 Calycin-like PAJ_RS19350 IPR012674 Calycin PAJ_RS19355 IPR000847 Transcription regulator HTH, LysR PAJ_RS19355 IPR005119 LysR, substrate-binding PAJ_RS19355 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS19360 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V PAJ_RS19360 IPR011057 Mss4-like PAJ_RS19365 IPR007037 Siderophore-interacting protein PAJ_RS19365 IPR013113 FAD-binding 9, siderophore-interacting PAJ_RS19365 IPR017938 Riboflavin synthase-like beta-barrel PAJ_RS19370 IPR011701 Major facilitator superfamily PAJ_RS19370 IPR020846 Major facilitator superfamily domain PAJ_RS19375 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal PAJ_RS19375 IPR022770 Ferric iron reductase FhuF domain PAJ_RS19375 IPR023188 DNA-binding protein Dps, conserved site PAJ_RS19380 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS19380 IPR019432 Siderophore biosynthesis protein, conserved domain PAJ_RS19385 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal PAJ_RS19385 IPR022770 Ferric iron reductase FhuF domain PAJ_RS19390 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS19390 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase PAJ_RS19395 IPR000531 TonB-dependent receptor, beta-barrel PAJ_RS19395 IPR010105 TonB-dependent siderophore receptor PAJ_RS19395 IPR010917 TonB-dependent receptor, conserved site PAJ_RS19395 IPR012910 TonB-dependent receptor, plug PAJ_RS19400 IPR003660 HAMP linker domain PAJ_RS19400 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS19400 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS19400 IPR024478 4HB MCP domain PAJ_RS19405 IPR002656 Acyltransferase 3 PAJ_RS19410 IPR009898 Protein of unknown function DUF1440 PAJ_RS19415 IPR001303 Class II aldolase/adducin N-terminal PAJ_RS19415 IPR004661 L-ribulose-5-phosphate 4-epimerase PAJ_RS19420 IPR004560 L-ribulose-5-phosphate 3-epimerase PAJ_RS19420 IPR013022 Xylose isomerase-like, TIM barrel domain PAJ_RS19425 IPR001754 Orotidine 5'-phosphate decarboxylase domain PAJ_RS19425 IPR011060 Ribulose-phosphate binding barrel PAJ_RS19425 IPR013785 Aldolase-type TIM barrel PAJ_RS19430 IPR000577 PAJ_RS19430 PAJ_RS19430 IPR018483 Carbohydrate kinase, FGGY, conserved site PAJ_RS19430 IPR018484 Carbohydrate kinase, FGGY, N-terminal PAJ_RS19430 IPR018485 Carbohydrate kinase, FGGY, C-terminal PAJ_RS19435 IPR000849 Sugar phosphate transporter PAJ_RS19435 IPR011701 Major facilitator superfamily PAJ_RS19435 IPR020846 Major facilitator superfamily domain PAJ_RS19440 IPR004375 Conserved hypothetical protein CHP00022 PAJ_RS19445 IPR003767 Malate/L-lactate dehydrogenase PAJ_RS19455 IPR005511 Senescence marker protein-30 (SMP-30) PAJ_RS19455 IPR011042 Six-bladed beta-propeller, TolB-like PAJ_RS19455 IPR013658 SMP-30/Gluconolactonase/LRE-like region PAJ_RS19460 IPR025997 Periplasmic binding protein domain PAJ_RS19460 IPR028082 Periplasmic binding protein-like I PAJ_RS19465 IPR001851 ABC transporter, permease PAJ_RS19470 IPR003439 ABC transporter-like PAJ_RS19470 IPR003593 AAA+ ATPase domain PAJ_RS19470 IPR017871 ABC transporter, conserved site PAJ_RS19470 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS19475 IPR005471 Transcription regulator IclR, N-terminal PAJ_RS19475 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS19475 IPR014757 Transcription regulator IclR, C-terminal PAJ_RS19475 IPR029016 GAF domain-like PAJ_RS19480 IPR000182 GNAT domain PAJ_RS19480 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS19485 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS19490 IPR011051 RmlC-like cupin domain PAJ_RS19490 IPR014710 RmlC-like jelly roll fold PAJ_RS19495 IPR007049 Carbohydrate-selective porin OprB PAJ_RS19500 IPR001395 Aldo/keto reductase PAJ_RS19500 IPR023210 NADP-dependent oxidoreductase domain PAJ_RS19505 IPR001000 Glycoside hydrolase, family 10 PAJ_RS19505 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS19505 IPR017853 Glycoside hydrolase, superfamily PAJ_RS19510 IPR002818 ThiJ/PfpI PAJ_RS19510 IPR009057 Homeodomain-like PAJ_RS19510 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS19510 IPR018062 HTH domain AraC-type, conserved site PAJ_RS19510 IPR029062 Class I glutamine amidotransferase-like PAJ_RS19515 IPR000073 Alpha/beta hydrolase fold-1 PAJ_RS19515 IPR029058 Alpha/Beta hydrolase fold PAJ_RS19520 IPR003680 Flavodoxin-like fold PAJ_RS19520 IPR023048 NADH-azoreductase, FMN-dependent PAJ_RS19520 IPR029039 Flavoprotein-like PAJ_RS19525 IPR005545 YCII-related PAJ_RS19525 IPR011008 Dimeric alpha-beta barrel PAJ_RS19530 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding PAJ_RS19530 IPR003660 HAMP linker domain PAJ_RS19530 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS19530 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS19535 IPR002059 Cold-shock protein, DNA-binding PAJ_RS19535 IPR011129 Cold shock protein PAJ_RS19535 IPR012156 Cold shock, CspA PAJ_RS19535 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS19535 IPR019844 Cold-shock conserved site PAJ_RS19540 IPR007167 Ferrous iron transporter FeoA domain PAJ_RS19540 IPR008988 Transcriptional repressor, C-terminal PAJ_RS19545 IPR003373 Ferrous iron transport protein B PAJ_RS19545 IPR011619 Ferrous iron transport protein B, N-terminal PAJ_RS19545 IPR011640 Ferrous iron transport protein B, C-terminal PAJ_RS19545 IPR011642 Nucleoside recognition Gate PAJ_RS19545 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS19550 IPR001173 Glycosyltransferase 2-like PAJ_RS19550 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS19555 IPR002797 Polysaccharide biosynthesis protein PAJ_RS19555 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain PAJ_RS19560 IPR001173 Glycosyltransferase 2-like PAJ_RS19560 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS19590 IPR009057 Homeodomain-like PAJ_RS19590 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal PAJ_RS19595 IPR003834 Cytochrome c assembly protein, transmembrane domain PAJ_RS19595 IPR012336 Thioredoxin-like fold PAJ_RS19595 IPR017937 Thioredoxin, conserved site PAJ_RS19595 IPR022910 Thiol:disulphide interchange protein DsbD PAJ_RS19595 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain PAJ_RS19600 IPR004323 Divalent ion tolerance protein, CutA PAJ_RS19600 IPR011322 Nitrogen regulatory PII-like, alpha/beta PAJ_RS19605 IPR004668 Anaerobic c4-dicarboxylate membrane transporter PAJ_RS19615 IPR007313 FxsA cytoplasmic membrane protein PAJ_RS19620 IPR011032 GroES (chaperonin 10)-like PAJ_RS19620 IPR018369 Chaperonin Cpn10, conserved site PAJ_RS19620 IPR020818 Chaperonin Cpn10 PAJ_RS19625 IPR001844 Chaperonin Cpn60 PAJ_RS19625 IPR002423 Chaperonin Cpn60/TCP-1 PAJ_RS19625 IPR018370 Chaperonin Cpn60, conserved site PAJ_RS19625 IPR027409 GroEL-like apical domain PAJ_RS19625 IPR027413 GroEL-like equatorial domain PAJ_RS19630 IPR025294 Protein of unknown function DUF4156 PAJ_RS19635 IPR003739 Lysine-2,3-aminomutase family PAJ_RS19635 IPR007197 Radical SAM PAJ_RS19635 IPR013785 Aldolase-type TIM barrel PAJ_RS19635 IPR022462 Lysine-2,3-aminomutase-like PAJ_RS19640 IPR001059 Translation elongation factor P/YeiP, central PAJ_RS19640 IPR008991 Translation protein SH3-like domain PAJ_RS19640 IPR011768 Translation elongation factor P PAJ_RS19640 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS19640 IPR013185 Translation elongation factor, KOW-like PAJ_RS19640 IPR013852 Translation elongation factor P/YeiP, conserved site PAJ_RS19640 IPR014722 Ribosomal protein L2 domain 2 PAJ_RS19640 IPR015365 Elongation factor P, C-terminal PAJ_RS19640 IPR020599 Translation elongation factor P/YeiP PAJ_RS19645 IPR012556 Entericidin EcnAB PAJ_RS19650 IPR012556 Entericidin EcnAB PAJ_RS19655 IPR000566 Lipocalin/cytosolic fatty-acid binding domain PAJ_RS19655 IPR002446 Lipocalin, bacterial PAJ_RS19655 IPR011038 Calycin-like PAJ_RS19655 IPR012674 Calycin PAJ_RS19655 IPR022271 Lipocalin, ApoD type PAJ_RS19655 IPR022272 Lipocalin family conserved site PAJ_RS19660 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) PAJ_RS19660 IPR004525 Elongation factor P--(R)-beta-lysine ligase PAJ_RS19660 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal PAJ_RS19660 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like PAJ_RS19665 IPR001478 PDZ domain PAJ_RS19665 IPR001940 Peptidase S1C PAJ_RS19665 IPR009003 Trypsin-like cysteine/serine peptidase domain PAJ_RS19665 IPR011783 Peptidase S1C, DegS PAJ_RS19670 IPR001478 PDZ domain PAJ_RS19670 IPR001940 Peptidase S1C PAJ_RS19670 IPR009003 Trypsin-like cysteine/serine peptidase domain PAJ_RS19670 IPR011782 Peptidase S1C, Do PAJ_RS19675 IPR009386 Protein of unknown function DUF1043 PAJ_RS19680 IPR005654 ATPase, AFG1-like PAJ_RS19680 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS19680 IPR030870 PAJ_RS19680 PAJ_RS19685 IPR005822 Ribosomal protein L13 PAJ_RS19685 IPR005823 Ribosomal protein L13, bacterial-type PAJ_RS19685 IPR023563 Ribosomal protein L13, conserved site PAJ_RS19685 IPR023564 Ribosomal protein L13 domain PAJ_RS19690 IPR000754 Ribosomal protein S9 PAJ_RS19690 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAJ_RS19690 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS19690 IPR020574 Ribosomal protein S9, conserved site PAJ_RS19690 IPR023035 Ribosomal protein S9, bacterial/plastid PAJ_RS19695 IPR004045 Glutathione S-transferase, N-terminal PAJ_RS19695 IPR004046 Glutathione S-transferase, C-terminal PAJ_RS19695 IPR010987 Glutathione S-transferase, C-terminal-like PAJ_RS19695 IPR012336 Thioredoxin-like fold PAJ_RS19700 IPR007481 Stringent starvation protein B PAJ_RS19705 IPR001094 Flavodoxin PAJ_RS19705 IPR001433 Oxidoreductase FAD/NAD(P)-binding PAJ_RS19705 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase PAJ_RS19705 IPR003097 FAD-binding, type 1 PAJ_RS19705 IPR008254 Flavodoxin/nitric oxide synthase PAJ_RS19705 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain PAJ_RS19705 IPR017938 Riboflavin synthase-like beta-barrel PAJ_RS19705 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 PAJ_RS19705 IPR029039 Flavoprotein-like PAJ_RS19710 IPR002489 Glutamate synthase, alpha subunit, C-terminal PAJ_RS19710 IPR002932 Glutamate synthase domain PAJ_RS19710 IPR006982 Glutamate synthase, central-N PAJ_RS19710 IPR013785 Aldolase-type TIM barrel PAJ_RS19710 IPR017932 Glutamine amidotransferase type 2 domain PAJ_RS19710 IPR029055 Nucleophile aminohydrolases, N-terminal PAJ_RS19715 IPR000014 PAS domain PAJ_RS19715 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS19715 IPR003594 Histidine kinase-like ATPase, C-terminal domain PAJ_RS19715 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain PAJ_RS19715 IPR004358 Signal transduction histidine kinase-related protein, C-terminal PAJ_RS19715 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain PAJ_RS19715 IPR011006 CheY-like superfamily PAJ_RS19715 IPR013767 PAS fold PAJ_RS19715 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB PAJ_RS19715 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain PAJ_RS19720 IPR001264 Glycosyl transferase, family 51 PAJ_RS19720 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase PAJ_RS19720 IPR023346 Lysozyme-like domain PAJ_RS19725 IPR000032 Phosphocarrier HPr protein-like PAJ_RS19725 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PAJ_RS19730 IPR005337 ATPase, P-loop-containing PAJ_RS19730 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS19735 IPR002178 PTS EIIA type-2 domain PAJ_RS19735 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN PAJ_RS19735 IPR016152 Phosphotransferase/anion transporter PAJ_RS19740 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein PAJ_RS19745 IPR000394 RNA polymerase sigma factor 54 PAJ_RS19745 IPR007046 RNA polymerase sigma factor 54, core-binding PAJ_RS19745 IPR007634 RNA polymerase sigma factor 54, DNA-binding PAJ_RS19750 IPR003439 ABC transporter-like PAJ_RS19750 IPR003593 AAA+ ATPase domain PAJ_RS19750 IPR017871 ABC transporter, conserved site PAJ_RS19750 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS19750 IPR030921 PAJ_RS19750 PAJ_RS19750 IPR032823 PAJ_RS19750 PAJ_RS19755 IPR005653 Organic solvent tolerance-like, N-terminal PAJ_RS19755 IPR014340 Lipopolysaccharide assembly, LptA PAJ_RS19760 IPR010664 Lipopolysaccharide assembly, LptC-related PAJ_RS19760 IPR026265 Lipopolysaccharide export system protein LptC PAJ_RS19765 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase PAJ_RS19765 IPR023214 HAD-like domain PAJ_RS19770 IPR000644 CBS domain PAJ_RS19770 IPR001347 Sugar isomerase (SIS) PAJ_RS19770 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type PAJ_RS19775 IPR004481 Sodium/potassium/calcium exchanger PAJ_RS19775 IPR004837 Sodium/calcium exchanger membrane region PAJ_RS19780 IPR003439 ABC transporter-like PAJ_RS19780 IPR003593 AAA+ ATPase domain PAJ_RS19780 IPR017871 ABC transporter, conserved site PAJ_RS19780 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS19785 IPR003453 Permease domain PAJ_RS19785 IPR030802 PAJ_RS19785 PAJ_RS19790 IPR003399 Mammalian cell entry-related PAJ_RS19790 IPR030970 PAJ_RS19790 PAJ_RS19795 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC PAJ_RS19795 IPR023094 Toluene tolerance protein, alpha-helical PAJ_RS19795 IPR032710 PAJ_RS19795 PAJ_RS19800 IPR002645 STAS domain PAJ_RS19805 IPR002634 BolA protein PAJ_RS19810 IPR001986 Enolpyruvate transferase domain PAJ_RS19810 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase PAJ_RS19810 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta PAJ_RS19815 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS19820 IPR000092 Polyprenyl synthetase PAJ_RS19820 IPR008949 Terpenoid synthase PAJ_RS19820 IPR017446 Polyprenyl synthetase-related PAJ_RS19825 IPR001787 Ribosomal protein L21 PAJ_RS19825 IPR018258 Ribosomal protein L21, conserved site PAJ_RS19825 IPR028909 Ribosomal protein L21-like PAJ_RS19830 IPR001684 Ribosomal protein L27 PAJ_RS19830 IPR018261 Ribosomal protein L27, conserved site PAJ_RS19835 IPR006073 GTP binding domain PAJ_RS19835 IPR006074 GTP1/OBG, conserved site PAJ_RS19835 IPR006169 GTP1/OBG domain PAJ_RS19835 IPR014100 GTP-binding protein Obg/CgtA PAJ_RS19835 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS19840 IPR003736 Phenylacetic acid degradation-related domain PAJ_RS19840 IPR006683 Thioesterase superfamily PAJ_RS19840 IPR029069 HotDog domain PAJ_RS19845 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C PAJ_RS19845 IPR012338 Beta-lactamase/transpeptidase-like PAJ_RS19850 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal PAJ_RS19850 IPR006359 Transcription elongation factor GreA PAJ_RS19850 IPR018151 Transcription elongation factor, GreA/GreB, conserved site PAJ_RS19850 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal PAJ_RS19850 IPR023459 Transcription elongation factor GreA/GreB family PAJ_RS19850 IPR028624 Transcription elongation factor GreA/GreB PAJ_RS19855 IPR001890 RNA-binding, CRM domain PAJ_RS19855 IPR017924 RNA-binding protein YhbY PAJ_RS19860 IPR002877 Ribosomal RNA methyltransferase FtsJ domain PAJ_RS19860 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria PAJ_RS19860 IPR015507 Ribosomal RNA large subunit methyltransferase E PAJ_RS19860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS19870 IPR000489 Pterin-binding PAJ_RS19870 IPR006390 Dihydropteroate synthase PAJ_RS19870 IPR011005 Dihydropteroate synthase-like PAJ_RS19875 IPR005841 Alpha-D-phosphohexomutase superfamily PAJ_RS19875 IPR005843 Alpha-D-phosphohexomutase, C-terminal PAJ_RS19875 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I PAJ_RS19875 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II PAJ_RS19875 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III PAJ_RS19875 IPR006352 Phosphoglucosamine mutase PAJ_RS19875 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III PAJ_RS19875 IPR016066 Alpha-D-phosphohexomutase, conserved site PAJ_RS19880 IPR004692 Preprotein translocase SecG subunit PAJ_RS19895 IPR003728 Ribosome maturation factor RimP PAJ_RS19895 IPR028989 Ribosome maturation factor RimP, N-terminal PAJ_RS19895 IPR028998 Ribosome maturation factor RimP, C-terminal PAJ_RS19900 IPR003029 Ribosomal protein S1, RNA-binding domain PAJ_RS19900 IPR004087 K Homology domain PAJ_RS19900 IPR009019 K homology domain, prokaryotic type PAJ_RS19900 IPR010213 Transcription termination factor NusA PAJ_RS19900 IPR010214 Transcription termination factor NusA, C-terminal duplication PAJ_RS19900 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical PAJ_RS19900 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS19900 IPR013735 Transcription factor NusA, N-terminal PAJ_RS19900 IPR015946 K homology domain-like, alpha/beta PAJ_RS19900 IPR022967 RNA-binding domain, S1 PAJ_RS19900 IPR025249 KH domain, NusA-like PAJ_RS19900 IPR030842 PAJ_RS19900 PAJ_RS19905 IPR000178 Translation initiation factor aIF-2, bacterial-like PAJ_RS19905 IPR005225 Small GTP-binding protein domain PAJ_RS19905 IPR006847 Translation initiation factor IF-2, N-terminal PAJ_RS19905 IPR009000 Translation protein, beta-barrel domain PAJ_RS19905 IPR009061 DNA binding domain, putative PAJ_RS19905 IPR013575 Initiation factor 2 associated domain, bacterial PAJ_RS19905 IPR023115 Translation initiation factor IF- 2, domain 3 PAJ_RS19905 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS19910 IPR000238 Ribosome-binding factor A PAJ_RS19910 IPR015946 K homology domain-like, alpha/beta PAJ_RS19910 IPR020053 Ribosome-binding factor A, conserved site PAJ_RS19910 IPR023799 Ribosome-binding factor A domain PAJ_RS19915 IPR002501 Pseudouridine synthase II PAJ_RS19915 IPR014780 tRNA pseudouridine synthase II, TruB PAJ_RS19915 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal PAJ_RS19915 IPR015947 PUA-like domain PAJ_RS19915 IPR020103 Pseudouridine synthase, catalytic domain PAJ_RS19915 IPR032819 PAJ_RS19915 PAJ_RS19920 IPR000589 Ribosomal protein S15 PAJ_RS19920 IPR005290 Ribosomal protein S15, bacterial-type PAJ_RS19920 IPR009068 S15/NS1, RNA-binding PAJ_RS19925 IPR001247 Exoribonuclease, phosphorolytic domain 1 PAJ_RS19925 IPR003029 Ribosomal protein S1, RNA-binding domain PAJ_RS19925 IPR004087 K Homology domain PAJ_RS19925 IPR004088 K Homology domain, type 1 PAJ_RS19925 IPR012162 Polyribonucleotide nucleotidyltransferase PAJ_RS19925 IPR012340 Nucleic acid-binding, OB-fold PAJ_RS19925 IPR015847 Exoribonuclease, phosphorolytic domain 2 PAJ_RS19925 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain PAJ_RS19925 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS19925 IPR022967 RNA-binding domain, S1 PAJ_RS19925 IPR027408 PNPase/RNase PH domain PAJ_RS19930 IPR011990 Tetratricopeptide-like helical domain PAJ_RS19930 IPR013105 Tetratricopeptide TPR2 PAJ_RS19930 IPR019734 Tetratricopeptide repeat PAJ_RS19930 IPR023605 Lipoprotein NlpI PAJ_RS19935 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site PAJ_RS19935 IPR001650 Helicase, C-terminal PAJ_RS19935 IPR005580 DbpA, RNA-binding PAJ_RS19935 IPR011545 DEAD/DEAH box helicase domain PAJ_RS19935 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS19935 IPR021046 Cold-shock protein, DEAD box A, C-terminal PAJ_RS19935 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS19935 IPR028618 ATP-dependent RNA helicase DeaD PAJ_RS19940 IPR011251 Luciferase-like domain PAJ_RS19940 IPR019949 Luciferase family oxidoreductase, group 1 PAJ_RS19945 IPR001539 Peptidase U32 PAJ_RS19950 IPR001539 Peptidase U32 PAJ_RS19955 IPR003033 SCP2 sterol-binding domain PAJ_RS19955 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT PAJ_RS19960 IPR000182 GNAT domain PAJ_RS19960 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS19965 IPR000305 GIY-YIG nuclease superfamily PAJ_RS19970 IPR011194 Uncharacterised protein family UPF0306 PAJ_RS19970 IPR012349 FMN-binding split barrel PAJ_RS19975 IPR002818 ThiJ/PfpI PAJ_RS19975 IPR006286 Peptidase C56, PfpI PAJ_RS19975 IPR029062 Class I glutamine amidotransferase-like PAJ_RS19980 IPR016040 NAD(P)-binding domain PAJ_RS19985 IPR001989 Radical-activating enzyme, conserved site PAJ_RS19985 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic PAJ_RS19985 IPR013785 Aldolase-type TIM barrel PAJ_RS19990 IPR005144 ATP-cone PAJ_RS19990 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic PAJ_RS19990 IPR019777 Formate C-acetyltransferase glycine radical, conserved site PAJ_RS19995 IPR013781 Glycoside hydrolase, catalytic domain PAJ_RS19995 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal PAJ_RS19995 IPR015883 Glycoside hydrolase family 20, catalytic core PAJ_RS19995 IPR017853 Glycoside hydrolase, superfamily PAJ_RS19995 IPR025705 Beta-hexosaminidase PAJ_RS19995 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like PAJ_RS20005 IPR000843 Transcription regulator HTH, LacI PAJ_RS20005 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS20005 IPR028082 Periplasmic binding protein-like I PAJ_RS20010 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site PAJ_RS20010 IPR006656 Molybdopterin oxidoreductase PAJ_RS20010 IPR006657 Molydopterin dinucleotide-binding domain PAJ_RS20010 IPR009010 Aspartate decarboxylase-like domain PAJ_RS20015 IPR001460 Penicillin-binding protein, transpeptidase PAJ_RS20015 IPR005311 Penicillin-binding protein, dimerisation domain PAJ_RS20015 IPR012338 Beta-lactamase/transpeptidase-like PAJ_RS20020 IPR006143 RND efflux pump, membrane fusion protein PAJ_RS20020 IPR022824 Multidrug resistance protein MdtA PAJ_RS20020 IPR032317 PAJ_RS20020 PAJ_RS20025 IPR001036 Acriflavin resistance protein PAJ_RS20025 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAJ_RS20030 IPR001036 Acriflavin resistance protein PAJ_RS20030 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains PAJ_RS20035 IPR003423 Outer membrane efflux protein PAJ_RS20035 IPR010131 RND efflux system, outer membrane lipoprotein, NodT PAJ_RS20040 IPR000873 AMP-dependent synthetase/ligase PAJ_RS20040 IPR002123 Phospholipid/glycerol acyltransferase PAJ_RS20040 IPR020845 AMP-binding, conserved site PAJ_RS20040 IPR023775 Bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl synthetase Aas PAJ_RS20045 IPR011701 Major facilitator superfamily PAJ_RS20045 IPR020846 Major facilitator superfamily domain PAJ_RS20045 IPR023727 Lysophospholipid transporter LplT PAJ_RS20050 IPR003660 HAMP linker domain PAJ_RS20050 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS20050 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS20050 IPR024478 4HB MCP domain PAJ_RS20055 IPR006056 Enamine/imine deaminase YjgF-like PAJ_RS20055 IPR006175 YjgF/Yer057p/UK114 family PAJ_RS20055 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PAJ_RS20055 IPR019897 YjgF-like protein, conserved site PAJ_RS20060 IPR002801 Aspartate transcarbamylase regulatory subunit PAJ_RS20060 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal PAJ_RS20060 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal PAJ_RS20065 IPR002082 Aspartate carbamoyltransferase PAJ_RS20065 IPR006130 Aspartate/ornithine carbamoyltransferase PAJ_RS20065 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain PAJ_RS20065 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding PAJ_RS20070 IPR002292 Ornithine/putrescine carbamoyltransferase PAJ_RS20070 IPR006130 Aspartate/ornithine carbamoyltransferase PAJ_RS20070 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain PAJ_RS20070 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding PAJ_RS20070 IPR024904 Ornithine carbamoyltransferase PAJ_RS20075 IPR009671 Regulator of ribonuclease activity B domain PAJ_RS20075 IPR016716 Regulator of ribonuclease activity B PAJ_RS20080 IPR009078 Ferritin-like superfamily PAJ_RS20080 IPR010386 tRNA-hydroxylase MiaE PAJ_RS20080 IPR012347 Ferritin-related PAJ_RS20085 IPR000182 GNAT domain PAJ_RS20085 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS20095 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site PAJ_RS20095 IPR002300 Aminoacyl-tRNA synthetase, class Ia PAJ_RS20095 IPR002303 Valine-tRNA ligase PAJ_RS20095 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain PAJ_RS20095 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding PAJ_RS20095 IPR010978 tRNA-binding arm PAJ_RS20095 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding PAJ_RS20095 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS20095 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm PAJ_RS20100 IPR007459 DNA polymerase III chi subunit, HolC PAJ_RS20105 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal PAJ_RS20105 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal PAJ_RS20105 IPR011356 Leucine aminopeptidase/peptidase B PAJ_RS20105 IPR023042 Peptidase M17, leucine aminopeptidase PAJ_RS20110 IPR005495 Permease YjgP/YjgQ, predicted PAJ_RS20110 IPR030922 PAJ_RS20110 PAJ_RS20115 IPR005495 Permease YjgP/YjgQ, predicted PAJ_RS20115 IPR030923 PAJ_RS20115 PAJ_RS20120 IPR001452 SH3 domain PAJ_RS20120 IPR011511 Variant SH3 domain PAJ_RS20120 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 PAJ_RS20125 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site PAJ_RS20125 IPR002933 Peptidase M20 PAJ_RS20125 IPR011650 Peptidase M20, dimerisation domain PAJ_RS20130 IPR010768 Domain of unknown function DUF1355 PAJ_RS20130 IPR017027 Uncharacterised conserved protein UCP034405 PAJ_RS20130 IPR029062 Class I glutamine amidotransferase-like PAJ_RS20135 IPR001559 Aryldialkylphosphatase PAJ_RS20135 IPR017947 Aryldialkylphosphatase, zinc-binding site PAJ_RS20135 IPR032466 PAJ_RS20135 PAJ_RS20140 IPR001851 ABC transporter, permease PAJ_RS20145 IPR003439 ABC transporter-like PAJ_RS20145 IPR003593 AAA+ ATPase domain PAJ_RS20145 IPR017871 ABC transporter, conserved site PAJ_RS20145 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS20150 IPR000843 Transcription regulator HTH, LacI PAJ_RS20150 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS20150 IPR028082 Periplasmic binding protein-like I PAJ_RS20155 IPR025997 Periplasmic binding protein domain PAJ_RS20155 IPR028082 Periplasmic binding protein-like I PAJ_RS20160 IPR002139 Ribokinase PAJ_RS20160 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PAJ_RS20160 IPR011611 Carbohydrate kinase PfkB PAJ_RS20160 IPR029056 Ribokinase-like PAJ_RS20165 IPR005137 Photosystem I BtpA, assembly PAJ_RS20165 IPR011060 Ribulose-phosphate binding barrel PAJ_RS20165 IPR013785 Aldolase-type TIM barrel PAJ_RS20170 IPR007383 Protein of unknown function DUF445 PAJ_RS20175 IPR012893 HipA-like, C-terminal PAJ_RS20175 IPR012894 HipA, N-terminal subdomain 2 PAJ_RS20175 IPR017508 HipA, N-terminal subdomain 1 PAJ_RS20180 IPR001387 Cro/C1-type helix-turn-helix domain PAJ_RS20180 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS20190 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS20190 IPR033186 PAJ_RS20190 PAJ_RS20195 IPR000914 Bacterial extracellular solute-binding protein, family 5 PAJ_RS20195 IPR030678 PAJ_RS20195 PAJ_RS20200 IPR002771 Multiple antibiotic resistance (MarC)-related PAJ_RS20210 IPR019637 Protein of unknown function DUF2501 PAJ_RS20230 IPR019292 5-methylcytosine restriction system component PAJ_RS20235 IPR011704 ATPase, dynein-related, AAA domain PAJ_RS20235 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS20240 IPR000330 SNF2-related PAJ_RS20240 IPR001650 Helicase, C-terminal PAJ_RS20240 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS20240 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS20245 IPR028943 EH signature domain PAJ_RS20250 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal PAJ_RS20260 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PAJ_RS20260 IPR003356 DNA methylase, adenine-specific PAJ_RS20260 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain PAJ_RS20260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS20265 IPR000055 Restriction endonuclease, type I, HsdS PAJ_RS20270 IPR006935 Helicase/UvrB domain PAJ_RS20270 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal PAJ_RS20270 IPR014001 Helicase, superfamily 1/2, ATP-binding domain PAJ_RS20270 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS20290 IPR028952 Immunity protein 38 PAJ_RS20300 IPR002575 Aminoglycoside phosphotransferase PAJ_RS20300 IPR011009 Protein kinase-like domain PAJ_RS20305 IPR014944 Toxin SymE-like PAJ_RS20315 IPR025320 Protein of unknown function DUF4225 PAJ_RS20325 IPR000310 Orn/Lys/Arg decarboxylase, major domain PAJ_RS20325 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal PAJ_RS20325 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS20325 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS20330 IPR000873 AMP-dependent synthetase/ligase PAJ_RS20340 IPR000847 Transcription regulator HTH, LysR PAJ_RS20340 IPR005119 LysR, substrate-binding PAJ_RS20340 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS20345 IPR003615 HNH nuclease PAJ_RS20345 IPR011396 Uncharacterised conserved protein UCP030850 PAJ_RS20350 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain PAJ_RS20350 IPR004090 Chemotaxis methyl-accepting receptor PAJ_RS20350 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site PAJ_RS20350 IPR024478 4HB MCP domain PAJ_RS20355 IPR001123 Lysine-type exporter protein (LYSE/YGGA) PAJ_RS20360 IPR000849 Sugar phosphate transporter PAJ_RS20360 IPR011701 Major facilitator superfamily PAJ_RS20360 IPR020846 Major facilitator superfamily domain PAJ_RS20365 IPR021225 Protein of unknown function DUF2778 PAJ_RS20375 IPR001034 HTH DeoR N-terminal domain PAJ_RS20375 IPR002139 Ribokinase PAJ_RS20375 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site PAJ_RS20375 IPR011611 Carbohydrate kinase PfkB PAJ_RS20375 IPR011877 Ribokinase, bacterial PAJ_RS20375 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS20375 IPR029056 Ribokinase-like PAJ_RS20380 IPR002220 DapA-like PAJ_RS20380 IPR013785 Aldolase-type TIM barrel PAJ_RS20385 IPR004375 Conserved hypothetical protein CHP00022 PAJ_RS20390 IPR000849 Sugar phosphate transporter PAJ_RS20390 IPR011701 Major facilitator superfamily PAJ_RS20390 IPR020846 Major facilitator superfamily domain PAJ_RS20405 IPR014030 Beta-ketoacyl synthase, N-terminal PAJ_RS20410 IPR002123 Phospholipid/glycerol acyltransferase PAJ_RS20415 IPR009081 Acyl carrier protein-like PAJ_RS20420 IPR003231 Acyl carrier protein (ACP) PAJ_RS20420 IPR009081 Acyl carrier protein-like PAJ_RS20430 IPR000873 AMP-dependent synthetase/ligase PAJ_RS20435 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ PAJ_RS20435 IPR016962 Dehydrase, ECs4332, predicted PAJ_RS20435 IPR029069 HotDog domain PAJ_RS20440 IPR001173 Glycosyltransferase 2-like PAJ_RS20440 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS20445 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family PAJ_RS20445 IPR029069 HotDog domain PAJ_RS20450 IPR004564 Outer membrane lipoprotein carrier protein LolA-like PAJ_RS20450 IPR029046 Lipoprotein localisation LolA/LolB/LppX PAJ_RS20455 IPR004869 Membrane transport protein, MMPL domain PAJ_RS20460 IPR021675 Protein of unknown function DUF3261 PAJ_RS20465 IPR014030 Beta-ketoacyl synthase, N-terminal PAJ_RS20465 IPR014031 Beta-ketoacyl synthase, C-terminal PAJ_RS20465 IPR016039 Thiolase-like PAJ_RS20465 IPR018201 Beta-ketoacyl synthase, active site PAJ_RS20465 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PAJ_RS20470 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ PAJ_RS20470 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted PAJ_RS20470 IPR029069 HotDog domain PAJ_RS20475 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS20475 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative PAJ_RS20475 IPR016040 NAD(P)-binding domain PAJ_RS20480 IPR014030 Beta-ketoacyl synthase, N-terminal PAJ_RS20480 IPR014031 Beta-ketoacyl synthase, C-terminal PAJ_RS20480 IPR016039 Thiolase-like PAJ_RS20480 IPR018201 Beta-ketoacyl synthase, active site PAJ_RS20480 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PAJ_RS20485 IPR008278 4'-phosphopantetheinyl transferase superfamily PAJ_RS20495 IPR000801 Putative esterase PAJ_RS20495 IPR004193 Glycoside hydrolase, family 13, N-terminal PAJ_RS20495 IPR013783 Immunoglobulin-like fold PAJ_RS20495 IPR014756 Immunoglobulin E-set PAJ_RS20495 IPR029058 Alpha/Beta hydrolase fold PAJ_RS20500 IPR000182 GNAT domain PAJ_RS20500 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS20505 IPR001633 EAL domain PAJ_RS20510 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PAJ_RS20510 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain PAJ_RS20510 IPR016040 NAD(P)-binding domain PAJ_RS20515 IPR002915 DeoC/FbaB/ lacD aldolase PAJ_RS20515 IPR013785 Aldolase-type TIM barrel PAJ_RS20520 IPR002085 Alcohol dehydrogenase superfamily, zinc-type PAJ_RS20520 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site PAJ_RS20520 IPR011032 GroES (chaperonin 10)-like PAJ_RS20520 IPR013149 Alcohol dehydrogenase, C-terminal PAJ_RS20520 IPR013154 Alcohol dehydrogenase GroES-like PAJ_RS20520 IPR016040 NAD(P)-binding domain PAJ_RS20520 IPR020843 Polyketide synthase, enoylreductase PAJ_RS20525 IPR000577 PAJ_RS20525 PAJ_RS20525 IPR018483 Carbohydrate kinase, FGGY, conserved site PAJ_RS20525 IPR018484 Carbohydrate kinase, FGGY, N-terminal PAJ_RS20525 IPR018485 Carbohydrate kinase, FGGY, C-terminal PAJ_RS20530 IPR000849 Sugar phosphate transporter PAJ_RS20530 IPR011701 Major facilitator superfamily PAJ_RS20530 IPR020846 Major facilitator superfamily domain PAJ_RS20535 IPR009057 Homeodomain-like PAJ_RS20535 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS20535 IPR020449 Transcription regulator HTH, AraC- type PAJ_RS20535 IPR032687 PAJ_RS20535 PAJ_RS20540 IPR002575 Aminoglycoside phosphotransferase PAJ_RS20540 IPR011009 Protein kinase-like domain PAJ_RS20545 IPR002293 Amino acid/polyamine transporter I PAJ_RS20545 IPR004757 Ethanolamine permease PAJ_RS20550 IPR005814 Aminotransferase class-III PAJ_RS20550 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS20550 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS20550 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS20560 IPR008928 Six-hairpin glycosidase-like PAJ_RS20560 IPR010905 Glycosyl hydrolase, family 88 PAJ_RS20560 IPR012341 Six-hairpin glycosidase PAJ_RS20565 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS20565 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase PAJ_RS20565 IPR016040 NAD(P)-binding domain PAJ_RS20565 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS20570 IPR007045 5-keto 4-deoxyuronate isomerase PAJ_RS20570 IPR011051 RmlC-like cupin domain PAJ_RS20570 IPR021120 KduI/IolB isomerase PAJ_RS20570 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain PAJ_RS20570 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain PAJ_RS20585 IPR000515 MetI-like domain PAJ_RS20590 IPR003439 ABC transporter-like PAJ_RS20590 IPR003593 AAA+ ATPase domain PAJ_RS20590 IPR017871 ABC transporter, conserved site PAJ_RS20590 IPR018632 C-terminal AAA-associated domain PAJ_RS20590 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS20595 IPR000258 Bacterial ice-nucleation, octamer repeat PAJ_RS20600 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase PAJ_RS20600 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PAJ_RS20600 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PAJ_RS20600 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site PAJ_RS20600 IPR029017 Enolase N-terminal domain-like PAJ_RS20600 IPR029065 Enolase C-terminal domain-like PAJ_RS20605 IPR002347 Glucose/ribitol dehydrogenase PAJ_RS20605 IPR016040 NAD(P)-binding domain PAJ_RS20605 IPR020904 Short-chain dehydrogenase/reductase, conserved site PAJ_RS20610 IPR002085 Alcohol dehydrogenase superfamily, zinc-type PAJ_RS20610 IPR011032 GroES (chaperonin 10)-like PAJ_RS20610 IPR013149 Alcohol dehydrogenase, C-terminal PAJ_RS20610 IPR013154 Alcohol dehydrogenase GroES-like PAJ_RS20610 IPR016040 NAD(P)-binding domain PAJ_RS20615 IPR005829 Sugar transporter, conserved site PAJ_RS20615 IPR011701 Major facilitator superfamily PAJ_RS20615 IPR020846 Major facilitator superfamily domain PAJ_RS20620 IPR000524 Transcription regulator HTH, GntR PAJ_RS20620 IPR008920 Transcription regulator FadR/GntR, C-terminal PAJ_RS20620 IPR011711 GntR, C-terminal PAJ_RS20620 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS20625 IPR004027 SEC-C motif PAJ_RS20625 IPR011978 Uncharacterised protein family UPF0149 PAJ_RS20625 IPR032710 PAJ_RS20625 PAJ_RS20635 IPR024572 Protein of unknown function DUF3315 PAJ_RS20640 IPR000182 GNAT domain PAJ_RS20640 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS20645 IPR024461 Protein of unknown function DUF1640 PAJ_RS20650 IPR000917 Sulfatase PAJ_RS20650 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha PAJ_RS20650 IPR017850 Alkaline-phosphatase-like, core domain PAJ_RS20655 IPR008441 Capsular polysaccharide synthesis PAJ_RS20655 IPR029044 Nucleotide-diphospho-sugar transferases PAJ_RS20660 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain PAJ_RS20660 IPR015943 WD40/YVTN repeat-like-containing domain PAJ_RS20665 IPR013078 Histidine phosphatase superfamily, clade-1 PAJ_RS20665 IPR029033 Histidine phosphatase superfamily PAJ_RS20670 IPR005828 General substrate transporter PAJ_RS20670 IPR020846 Major facilitator superfamily domain PAJ_RS20675 IPR000843 Transcription regulator HTH, LacI PAJ_RS20675 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS20675 IPR028082 Periplasmic binding protein-like I PAJ_RS20680 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain PAJ_RS20680 IPR023186 Inosine/uridine-preferring nucleoside hydrolase PAJ_RS20685 IPR005829 Sugar transporter, conserved site PAJ_RS20685 IPR011701 Major facilitator superfamily PAJ_RS20685 IPR020846 Major facilitator superfamily domain PAJ_RS20690 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain PAJ_RS20695 IPR000160 GGDEF domain PAJ_RS20695 IPR029787 Nucleotide cyclase PAJ_RS20700 IPR009885 Protein of unknown function DUF1435 PAJ_RS20720 IPR002052 DNA methylase, N-6 adenine-specific, conserved site PAJ_RS20720 IPR007848 Methyltransferase small domain PAJ_RS20720 IPR013675 Methyltransferase small, N-terminal PAJ_RS20720 IPR023543 rRNA small subunit methyltransferase C PAJ_RS20720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like PAJ_RS20725 IPR004615 DNA polymerase III, psi subunit PAJ_RS20730 IPR000182 GNAT domain PAJ_RS20730 IPR006464 Ribosomal-protein-alanine acetyltransferase PAJ_RS20730 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS20735 IPR006439 HAD hydrolase, subfamily IA PAJ_RS20735 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB PAJ_RS20735 IPR023198 Phosphoglycolate phosphatase, domain 2 PAJ_RS20735 IPR023214 HAD-like domain PAJ_RS20740 IPR019305 Uncharacterised protein family Smp PAJ_RS20745 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like PAJ_RS20745 IPR023190 Phosphoserine phosphatase, domain 2 PAJ_RS20745 IPR023214 HAD-like domain PAJ_RS20750 IPR003593 AAA+ ATPase domain PAJ_RS20750 IPR004504 DNA repair protein RadA PAJ_RS20750 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PAJ_RS20750 IPR020568 Ribosomal protein S5 domain 2-type fold PAJ_RS20750 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS20755 IPR001387 Cro/C1-type helix-turn-helix domain PAJ_RS20755 IPR004821 Cytidyltransferase-like domain PAJ_RS20755 IPR006417 Nicotinamide-nucleotide adenylyltransferase PAJ_RS20755 IPR010982 Lambda repressor-like, DNA-binding domain PAJ_RS20755 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PAJ_RS20755 IPR016429 Bifunctional transcriptional regulator NadR PAJ_RS20755 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS20760 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS20760 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS20760 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS20765 IPR031854 PAJ_RS20765 PAJ_RS20770 IPR000259 Fimbrial-type adhesion domain PAJ_RS20770 IPR008966 Adhesion domain PAJ_RS20775 IPR001829 Pili assembly chaperone, bacterial PAJ_RS20775 IPR008962 PapD-like PAJ_RS20775 IPR016147 PapD, N-terminal, bacterial PAJ_RS20775 IPR016148 Pili assembly chaperone, C-terminal domain PAJ_RS20780 IPR000015 Outer membrane usher protein PAJ_RS20780 IPR018030 Fimbrial membrane usher, conserved site PAJ_RS20780 IPR025885 PapC, N-terminal domain PAJ_RS20780 IPR025949 PapC-like, C-terminal domain PAJ_RS20785 IPR000259 Fimbrial-type adhesion domain PAJ_RS20785 IPR008966 Adhesion domain PAJ_RS20785 IPR011228 Uncharacterised conserved protein UCP029766 PAJ_RS20790 IPR001829 Pili assembly chaperone, bacterial PAJ_RS20790 IPR008962 PapD-like PAJ_RS20790 IPR016147 PapD, N-terminal, bacterial PAJ_RS20790 IPR016148 Pili assembly chaperone, C-terminal domain PAJ_RS20795 IPR002085 Alcohol dehydrogenase superfamily, zinc-type PAJ_RS20795 IPR011032 GroES (chaperonin 10)-like PAJ_RS20795 IPR013154 Alcohol dehydrogenase GroES-like PAJ_RS20795 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 PAJ_RS20795 IPR016040 NAD(P)-binding domain PAJ_RS20795 IPR020843 Polyketide synthase, enoylreductase PAJ_RS20800 IPR000847 Transcription regulator HTH, LysR PAJ_RS20800 IPR005119 LysR, substrate-binding PAJ_RS20800 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS20805 IPR003439 ABC transporter-like PAJ_RS20805 IPR003593 AAA+ ATPase domain PAJ_RS20805 IPR017871 ABC transporter, conserved site PAJ_RS20805 IPR022374 ABC transporter, ATP-binding protein, ChvD PAJ_RS20805 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS20805 IPR032781 PAJ_RS20805 PAJ_RS20810 IPR001034 HTH DeoR N-terminal domain PAJ_RS20810 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS20810 IPR014036 DeoR C-terminal sensor domain PAJ_RS20810 IPR018356 Transcription regulator, HTH DeoR-type, conserved site PAJ_RS20815 IPR002139 Ribokinase PAJ_RS20815 IPR011611 Carbohydrate kinase PfkB PAJ_RS20815 IPR011877 Ribokinase, bacterial PAJ_RS20815 IPR029056 Ribokinase-like PAJ_RS20820 IPR005275 L-fucose permease FucP PAJ_RS20820 IPR011701 Major facilitator superfamily PAJ_RS20820 IPR020846 Major facilitator superfamily domain PAJ_RS20825 IPR011013 Galactose mutarotase-like domain PAJ_RS20825 IPR027839 Protein of unknown function DUF4432 PAJ_RS20830 IPR002129 Pyridoxal phosphate-dependent decarboxylase PAJ_RS20830 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 PAJ_RS20830 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 PAJ_RS20830 IPR015424 Pyridoxal phosphate-dependent transferase PAJ_RS20835 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain PAJ_RS20835 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase PAJ_RS20840 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal PAJ_RS20840 IPR016181 Acyl-CoA N-acyltransferase PAJ_RS20840 IPR019432 Siderophore biosynthesis protein, conserved domain PAJ_RS20840 IPR022770 Ferric iron reductase FhuF domain PAJ_RS20845 IPR005829 Sugar transporter, conserved site PAJ_RS20845 IPR011701 Major facilitator superfamily PAJ_RS20845 IPR020846 Major facilitator superfamily domain PAJ_RS20850 IPR000531 TonB-dependent receptor, beta-barrel PAJ_RS20850 IPR010105 TonB-dependent siderophore receptor PAJ_RS20850 IPR012910 TonB-dependent receptor, plug PAJ_RS20855 IPR003439 ABC transporter-like PAJ_RS20855 IPR003593 AAA+ ATPase domain PAJ_RS20855 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE PAJ_RS20855 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS20860 IPR003439 ABC transporter-like PAJ_RS20860 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD PAJ_RS20860 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS20860 IPR032823 PAJ_RS20860 PAJ_RS20865 IPR001851 ABC transporter, permease PAJ_RS20865 IPR017778 ABC transporter, urea, permease protein, UrtC PAJ_RS20870 IPR001851 ABC transporter, permease PAJ_RS20870 IPR011989 Armadillo-like helical PAJ_RS20870 IPR016024 Armadillo-type fold PAJ_RS20870 IPR017779 ABC transporter, urea, permease protein, UrtB PAJ_RS20875 IPR017777 ABC transporter, urea, substrate-binding, UrtA PAJ_RS20875 IPR028082 Periplasmic binding protein-like I PAJ_RS20880 IPR000524 Transcription regulator HTH, GntR PAJ_RS20880 IPR008920 Transcription regulator FadR/GntR, C-terminal PAJ_RS20880 IPR011711 GntR, C-terminal PAJ_RS20880 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS20885 IPR000089 Biotin/lipoyl attachment PAJ_RS20885 IPR001882 Biotin-binding site PAJ_RS20885 IPR003778 Allophanate hydrolase subunit 2 PAJ_RS20885 IPR003833 Allophanate hydrolase subunit 1 PAJ_RS20885 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain PAJ_RS20885 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal PAJ_RS20885 IPR005482 Biotin carboxylase, C-terminal PAJ_RS20885 IPR011053 Single hybrid motif PAJ_RS20885 IPR011054 Rudiment single hybrid motif PAJ_RS20885 IPR013815 ATP-grasp fold, subdomain 1 PAJ_RS20885 IPR013816 ATP-grasp fold, subdomain 2 PAJ_RS20885 IPR014084 Urea carboxylase PAJ_RS20885 IPR016185 Pre-ATP-grasp domain PAJ_RS20885 IPR024946 Arginine repressor C-terminal-like domain PAJ_RS20885 IPR029000 Cyclophilin-like domain PAJ_RS20895 IPR000189 Prokaryotic transglycosylase, active site PAJ_RS20895 IPR008258 Lytic transglycosylase-like SLT domain PAJ_RS20895 IPR008939 Lytic transglycosylase, superhelical U-shaped PAJ_RS20895 IPR012289 Lytic transglycosylase, superhelical linker PAJ_RS20895 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain PAJ_RS20895 IPR023346 Lysozyme-like domain PAJ_RS20900 IPR000831 Trp repressor PAJ_RS20900 IPR010921 Trp repressor/replication initiator PAJ_RS20900 IPR013335 Trp repressor, bacterial PAJ_RS20905 IPR002786 Non-canonical purine NTP phosphatase PAJ_RS20905 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 PAJ_RS20905 IPR029001 Inosine triphosphate pyrophosphatase-like PAJ_RS20910 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site PAJ_RS20910 IPR013078 Histidine phosphatase superfamily, clade-1 PAJ_RS20910 IPR023086 Phosphoglycerate mutase, GpmB, probable PAJ_RS20910 IPR029033 Histidine phosphatase superfamily PAJ_RS20915 IPR009057 Homeodomain-like PAJ_RS20915 IPR010499 Bacterial transcription activator, effector binding PAJ_RS20915 IPR011256 Regulatory factor, effector binding domain PAJ_RS20915 IPR018060 DNA binding HTH domain, AraC-type PAJ_RS20915 IPR018062 HTH domain AraC-type, conserved site PAJ_RS20915 IPR020449 Transcription regulator HTH, AraC- type PAJ_RS20915 IPR029442 GyrI-like small molecule binding domain PAJ_RS20920 IPR010292 Uncharacterised protein family CreA PAJ_RS20925 IPR001789 Signal transduction response regulator, receiver domain PAJ_RS20925 IPR001867 Signal transduction response regulator, C-terminal PAJ_RS20925 IPR011006 CheY-like superfamily PAJ_RS20925 IPR011991 Winged helix-turn-helix DNA-binding domain PAJ_RS20925 IPR016032 Signal transduction response regulator, C-terminal effector PAJ_RS20930 IPR001537 tRNA/rRNA methyltransferase, SpoU type PAJ_RS20930 IPR004384 RNA methyltransferase TrmH, group 1 PAJ_RS20930 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PAJ_RS20930 IPR029028 Alpha/beta knot methyltransferases PAJ_RS20975 IPR011701 Major facilitator superfamily PAJ_RS20975 IPR020846 Major facilitator superfamily domain PAJ_RS21120 IPR007791 Heat shock protein DnaJ-like protein DjlA PAJ_RS21120 IPR029024 TerB-like PAJ_RS21395 IPR002502 N-acetylmuramoyl-L-alanine amidase domain PAJ_RS21465 IPR010737 Protein of unknown function, DUF1537 PAJ_RS21585 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS21590 IPR001650 Helicase, C-terminal PAJ_RS21590 IPR007502 Helicase-associated domain PAJ_RS21590 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type PAJ_RS21590 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal PAJ_RS21590 IPR027417 P-loop containing nucleoside triphosphate hydrolase PAJ_RS21715 IPR001441 Decaprenyl diphosphate synthase-like PAJ_RS21715 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site PAJ_RS21815 IPR018449 NIL domain PAJ_RS21815 IPR026253 Methionine import ATP-binding protein MetN PAJ_RS22260 IPR025157 Haemagluttinin repeat PAJ_RS22265 IPR006914 VENN motif-containing domain PAJ_RS22300 IPR005119 LysR, substrate-binding