locus_tag old_locus_tag gene Name start end strand product note type ID NCBI PAJ_RS00005 PAJ_0001 thrA thrA 342 2804 + bifunctional aspartate kinase/homoserine dehydrogenase I multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00005 PAJ_RS00010 PAJ_0002 PAJ_RS00010 2807 3736 + homoserine kinase gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00010 PAJ_RS00015 PAJ_0003 PAJ_RS00015 3740 5023 + threonine synthase gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00015 PAJ_RS00020 PAJ_0004 PAJ_RS00020 5095 5868 - hypothetical protein gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00020 PAJ_RS00025 PAJ_0005 PAJ_RS00025 6075 7028 + transaldolase gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00025 PAJ_RS00030 PAJ_0006 mogA mogA 7146 7733 + molybdopterin adenylyltransferase forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00030 PAJ_RS00035 PAJ_0007 PAJ_RS00035 7838 9145 + MFS transporter gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00035 PAJ_RS00040 PAJ_0008 PAJ_RS00040 9191 9751 - hypothetical protein gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00040 PAJ_RS00045 PAJ_0010 dnaK dnaK 10049 11960 + molecular chaperone DnaK heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria%3B frameshifted gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00045 PAJ_RS00050 PAJ_0011 PAJ_RS00050 12063 13208 + molecular chaperone DnaJ chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00050 PAJ_RS00055 PAJ_0012 nhaA nhaA 13471 14649 + Na+/H+ antiporter NhaA exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00055 PAJ_RS00060 PAJ_0013 rpsT rpsT 15149 15412 - 30S ribosomal protein S20 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00060 PAJ_RS00065 PAJ_0014 PAJ_RS00065 15730 16657 + bifunctional riboflavin kinase/FMN adenylyltransferase frameshifted gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00065 PAJ_RS00070 PAJ_0015 ileS ileS 16687 19506 + isoleucine--tRNA ligase IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00070 PAJ_RS00075 PAJ_0016 lspA lspA 19506 20009 + signal peptidase II lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00075 PAJ_RS00080 PAJ_0017 PAJ_RS00080 20013 20483 + peptidyl-prolyl cis-trans isomerase rotamase%3B accelerates isomerization of the peptidyl prolyl bond%2C involved in the folding of proteases gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00080 PAJ_RS00085 PAJ_0018 ispH ispH 20464 21414 + 4-hydroxy-3-methylbut-2-enyl diphosphate reductase catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00085 PAJ_RS00090 PAJ_0019 PAJ_RS00090 21625 22440 + 4-hydroxy-tetrahydrodipicolinate reductase catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00090 PAJ_RS00095 PAJ_0020 PAJ_RS00095 22910 24058 + carbamoyl-phosphate synthase small subunit catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00095 PAJ_RS00100 PAJ_0021 carB carB 24072 27302 + carbamoyl phosphate synthase large subunit four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00100 PAJ_RS00105 PAJ_RS00105 PAJ_RS00105 28297 28614 - hypothetical protein gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00105 PAJ_RS00110 PAJ_RS00110 PAJ_RS00110 28603 28872 + hypothetical protein gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00110 PAJ_RS00115 PAJ_0023 PAJ_RS00115 29054 30112 - NAD-dependent dehydratase gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00115 PAJ_RS00120 PAJ_0024 PAJ_RS00120 30208 31095 + LysR family transcriptional regulator gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00120 PAJ_RS00125 PAJ_0025 PAJ_RS00125 31358 32497 + membrane protein gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00125 PAJ_RS00130 PAJ_0026 folA folA 32730 33212 + dihydrofolate reductase catalyzes the reduction of dihydrofolate to tetrahydrofolate gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00130 PAJ_RS00135 PAJ_0027 apaH apaH 33269 34126 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00135 PAJ_RS00140 PAJ_0028 apaG apaG 34181 34558 - Co2+/Mg2+ efflux protein ApaG protein associated with Co2+ and Mg2+ efflux gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00140 PAJ_RS00145 PAJ_0029 ksgA ksgA 34562 35383 - 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00145 PAJ_RS00150 PAJ_0030 pdxA pdxA 35376 36368 - 4-hydroxythreonine-4-phosphate dehydrogenase PdxA catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00150 PAJ_RS00155 PAJ_0031 PAJ_RS00155 36358 37653 - peptidylprolyl isomerase SurA Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00155 PAJ_RS00160 PAJ_0032 PAJ_RS00160 37708 40089 - LPS assembly protein LptD is involved in outer membrane permeability gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00160 PAJ_RS00165 PAJ_0033 djlA djlA 40272 41087 + molecular chaperone DjlA functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00165 PAJ_RS00170 PAJ_0034 PAJ_RS00170 41145 41798 - bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00170 PAJ_RS00175 PAJ_0035 PAJ_RS00175 41837 44743 - RNA polymerase-associated protein RapA transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00175 PAJ_RS00180 PAJ_0037 PAJ_RS00180 44899 47310 - DNA polymerase II Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00180 PAJ_RS00185 PAJ_0038 PAJ_RS00185 47427 48191 + membrane protein gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00185 PAJ_RS00190 PAJ_0039 thiQ thiQ 48188 48889 - thiamine ABC transporter ATP-binding protein with TbpA and ThiP is part of the thiamine and TPP transport system gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00190 PAJ_RS00195 PAJ_0040 thiP thiP 48873 50483 - thiamine/thiamine pyrophosphate ABC transporter permease ThiP permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00195 PAJ_RS00200 PAJ_0041 tbpA tbpA 50459 51445 - thiamine transporter substrate binding subunit part of the thiamine and TPP transport system tbpA-thiPQ gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00200 PAJ_RS00205 PAJ_0042 PAJ_RS00205 51629 53290 - transcriptional regulator SgrR activates sgrS under glucose-phosphate stress conditions gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00205 PAJ_RS00210 PAJ_0043 PAJ_RS00210 53546 54724 + sugar MFS transporter gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00210 PAJ_RS00215 PAJ_0044 PAJ_RS00215 54768 56075 - D-galactonate transporter involved in the transport of galactonate gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00215 PAJ_RS00220 PAJ_0045 PAJ_RS00220 56268 57236 + LysR family transcriptional regulator gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00220 PAJ_RS00225 PAJ_0046 PAJ_RS00225 57199 57954 - 3-dehydroquinase gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00225 PAJ_RS00230 PAJ_0047 PAJ_RS00230 57976 59190 - transporter gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00230 PAJ_RS00235 PAJ_0048 PAJ_RS00235 59202 60065 - shikimate dehydrogenase YdiB%3B quinate/shikimate dehydrogenase from Escherichia coli uses both NAD and NAD(P) to convert quinate and shikimate to 3-dehydroquinate and 3-dehydroshikimate gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00235 PAJ_RS00240 PAJ_0049 PAJ_RS00240 60076 62109 - 2%2C4-dienoyl-CoA reductase gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00240 PAJ_RS00245 PAJ_0050 leuD leuD 62505 63110 - 3-isopropylmalate dehydratase small subunit catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00245 PAJ_RS00250 PAJ_0051 PAJ_RS00250 63121 64518 - 3-isopropylmalate dehydratase large subunit dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00250 PAJ_RS00255 PAJ_0052 PAJ_RS00255 64523 65614 - 3-isopropylmalate dehydrogenase gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00255 PAJ_RS00260 PAJ_0053 PAJ_RS00260 65617 67179 - 2-isopropylmalate synthase gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00260 PAJ_RS00265 PAJ_0054 PAJ_RS00265 68086 69810 + acetolactate synthase 3 catalytic subunit catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00265 PAJ_RS00270 PAJ_0055 ilvH ilvH 69813 70304 + acetolactate synthase small subunit with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00270 PAJ_RS00275 PAJ_0056 PAJ_RS00275 70501 71511 + DNA-binding transcriptional regulator FruR binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00275 PAJ_RS00280 PAJ_0057 PAJ_RS00280 72005 72463 + division/cell wall cluster transcriptional repressor MraZ gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00280 PAJ_RS00285 PAJ_0058 PAJ_RS00285 72466 73407 + 16S rRNA (cytosine(1402)-N(4))-methyltransferase gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00285 PAJ_RS00290 PAJ_0059 PAJ_RS00290 73404 73724 + cell division protein FtsL gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00290 PAJ_RS00295 PAJ_0060 PAJ_RS00295 73741 75507 + peptidoglycan glycosyltransferase FtsI penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00295 PAJ_RS00300 PAJ_0061 murE murE 75494 76981 + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00300 PAJ_RS00305 PAJ_0062 murF murF 76978 78336 + UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00305 PAJ_RS00310 PAJ_0063 mraY mraY 78330 79412 + phospho-N-acetylmuramoyl-pentapeptide-transferase First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00310 PAJ_RS00315 PAJ_0064 murD murD 79415 80731 + UDP-N-acetylmuramoylalanine--D-glutamate ligase UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00315 PAJ_RS00320 PAJ_0065 PAJ_RS00320 80731 81945 + cell division protein FtsW integral membrane protein involved in stabilizing FstZ ring during cell division gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00320 PAJ_RS00325 PAJ_0066 murG murG 81942 83000 + UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00325 PAJ_RS00330 PAJ_0067 PAJ_RS00330 83075 84550 + UDP-N-acetylmuramate--L-alanine ligase gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00330 PAJ_RS00335 PAJ_0068 ddl ddl 84543 85460 + D-alanine--D-alanine ligase D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00335 PAJ_RS00340 PAJ_0069 PAJ_RS00340 85462 86301 + cell division protein FtsQ involved in septum formation gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00340 PAJ_RS00345 PAJ_0070 ftsA ftsA 86298 87554 + cell division protein FtsA ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00345 PAJ_RS00350 PAJ_0072 PAJ_RS00350 87626 88780 + cell division protein FtsZ GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00350 PAJ_RS00355 PAJ_0073 lpxC lpxC 88882 89799 + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00355 PAJ_RS00360 PAJ_0074 PAJ_RS00360 90072 90596 + SecA regulator SecM gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00360 PAJ_RS00365 PAJ_0075 secA secA 90668 93373 + preprotein translocase subunit SecA functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00365 PAJ_RS00370 PAJ_0076 PAJ_RS00370 93511 93906 + 8-oxo-dGTP diphosphatase gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00370 PAJ_RS00375 PAJ_0077 PAJ_RS00375 93938 94135 - DNA gyrase inhibitor inhibits supercoiling by DNA gyrase by binding to the GyrB subunit gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00375 PAJ_RS00380 PAJ_0078 PAJ_RS00380 94144 94887 - cell division protein ZapD gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00380 PAJ_RS00385 PAJ_0079 coaE coaE 94891 95508 - dephospho-CoA kinase catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00385 PAJ_RS00390 PAJ_0080 PAJ_RS00390 95734 96774 + guanosine monophosphate reductase catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00390 PAJ_RS00395 PAJ_0081 PAJ_RS00395 96815 98014 - endonuclease gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00395 PAJ_RS00400 PAJ_0082 PAJ_RS00400 98007 99392 - type II secretion system protein GspE gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00400 PAJ_RS00405 PAJ_0083 PAJ_RS00405 99379 99834 - prepilin peptidase-dependent pilin gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00405 PAJ_RS00410 PAJ_0084 PAJ_RS00410 100011 100907 - nicotinate-nucleotide diphosphorylase catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00410 PAJ_RS00415 PAJ_0085 PAJ_RS00415 101105 101656 + N-acetyl-anhydromuranmyl-L-alanine amidase gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00415 PAJ_RS00420 PAJ_0086 PAJ_RS00420 101673 102527 + hypothetical protein involved in regulation of beta-lactamase%3B putative signaling protein gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00420 PAJ_RS00425 PAJ_0087 PAJ_RS00425 102509 103468 - alpha-N-arabinofuranosidase gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00425 PAJ_RS00430 PAJ_0088 PAJ_RS00430 103465 104868 - inner membrane symporter YicJ gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00430 PAJ_RS00435 PAJ_0089 PAJ_RS00435 105045 106400 - aromatic amino acid transporter gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00435 PAJ_RS00440 PAJ_0090 pdhR pdhR 106912 107676 + transcriptional regulator PdhR activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00440 PAJ_RS00445 PAJ_0091 aceE aceE 107779 110445 + pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00445 PAJ_RS00450 PAJ_0092 aceF aceF 110460 112364 + pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00450 PAJ_RS00455 PAJ_0093 PAJ_RS00455 112648 114072 + dihydrolipoyl dehydrogenase E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00455 PAJ_RS00460 PAJ_0094 PAJ_RS00460 114669 115613 - transcriptional regulator gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00460 PAJ_RS00465 PAJ_0095 PAJ_RS00465 115711 116709 + aldo/keto reductase gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00465 PAJ_RS00470 PAJ_0096 PAJ_RS00470 117033 119552 + aconitate hydratase B catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00470 PAJ_RS00475 PAJ_0097 PAJ_RS00475 119711 120073 + hypothetical protein gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00475 PAJ_RS00480 PAJ_0098 PAJ_RS00480 120192 121181 + 2-keto-3-deoxygluconate permease transports degraded pectin products into the bacterial cell gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00480 PAJ_RS00485 PAJ_0099 PAJ_RS00485 121181 122449 + membrane protein gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00485 PAJ_RS00490 PAJ_0100 PAJ_RS00490 123059 124606 + methyl-accepting chemotaxis citrate transducer Tcp gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00490 PAJ_RS00495 PAJ_0101 PAJ_RS00495 124659 125831 - rhamnosyltransferase I subunit B RhlB gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00495 PAJ_RS00500 PAJ_0102 PAJ_RS00500 125833 126669 - rhamnosyltransferase I subunit A RhlA gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00500 PAJ_RS00505 PAJ_0103 PAJ_RS00505 127332 128141 - S-adenosylmethionine decarboxylase S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00505 PAJ_RS00510 PAJ_0104 PAJ_RS00510 128170 129033 - spermidine synthase gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00510 PAJ_RS00515 PAJ_0105 PAJ_RS00515 129142 129489 - hypothetical protein gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00515 PAJ_RS00520 PAJ_0106 PAJ_RS00520 129648 131249 + multicopper oxidase laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00520 PAJ_RS00525 PAJ_0107 PAJ_RS00525 131250 132533 - methionine gamma-lyase catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00525 PAJ_RS00530 PAJ_0108 PAJ_RS00530 132768 133304 + hypoxanthine phosphoribosyltransferase catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00530 PAJ_RS00535 PAJ_0109 PAJ_RS00535 133374 134066 - carbonate dehydratase catalyzes the interconversion of bicarbonate and carbon dioxide gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00535 PAJ_RS00540 PAJ_0110 PAJ_RS00540 134146 135072 + multidrug ABC transporter ATP-binding protein gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00540 PAJ_RS00545 PAJ_0111 PAJ_RS00545 135069 135839 + ABC transporter permease gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00545 PAJ_RS00550 PAJ_0112 PAJ_RS00550 135896 136276 - aspartate 1-decarboxylase gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00550 PAJ_RS00555 PAJ_0113 panC panC 136321 137175 - pantoate--beta-alanine ligase catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00555 PAJ_RS00560 PAJ_0114 panB panB 137191 137984 - 3-methyl-2-oxobutanoate hydroxymethyltransferase catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate%3B frameshifted gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00560 PAJ_RS00565 PAJ_0115 PAJ_RS00565 138068 138553 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00565 PAJ_RS00570 PAJ_0116 pcnB pcnB 138550 139881 - polynucleotide adenylyltransferase PcnB Polymerase that creates the 3' poly(A) tail found in some mRNA's gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00570 PAJ_RS00575 PAJ_0117 PAJ_RS00575 140055 140936 - tRNA glutamyl-Q synthetase gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00575 PAJ_RS00580 PAJ_0118 dksA dksA 141007 141462 - transcriptional regulator gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00580 PAJ_RS00585 PAJ_0119 PAJ_RS00585 141712 142416 - sugar fermentation stimulation protein SfsA gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00585 PAJ_RS00590 PAJ_0120 PAJ_RS00590 142428 142955 - 2'-5' RNA ligase gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00590 PAJ_RS00595 PAJ_0121 PAJ_RS00595 142992 145487 + ATP-dependent helicase HrpB similar in sequence to the ATP-dependent RNA helicase HrpA gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00595 PAJ_RS00600 PAJ_0122 mrcB mrcB 145571 148099 + bifunctional glycosyl transferase/transpeptidase penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00600 PAJ_RS00605 PAJ_0123 PAJ_RS00605 148301 150505 + ferrichrome porin FhuA involved with the transport of ferrichrome across the outer membrane%3B binds the ferrichrome-iron ligand and interacts with the TonB protein gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00605 PAJ_RS00610 PAJ_RS00610 PAJ_RS00610 150545 151340 + iron-hydroxamate transporter ATP-binding subunit part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter%3B frameshifted gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00610 PAJ_RS00615 PAJ_0125 PAJ_RS00615 151351 152229 + iron-hydroxamate transporter substrate-binding subunit gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00615 PAJ_RS00620 PAJ_0126 PAJ_RS00620 152229 154208 + Fe3+-hydroxamate ABC transporter permease FhuB gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00620 PAJ_RS00625 PAJ_0127 PAJ_RS00625 154241 155521 - aspartate aminotransferase family protein Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00625 PAJ_RS00630 PAJ_0128 PAJ_RS00630 155711 156058 + iron-sulfur cluster insertion protein ErpA essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00630 PAJ_RS00635 PAJ_RS00635 PAJ_RS00635 156089 156340 - hypothetical protein gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00635 PAJ_RS00640 PAJ_RS00640 PAJ_RS00640 156482 157276 - cobalamin-binding protein solute binding component of the vitamin B12 transport system BtuCDF gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00640 PAJ_RS00645 PAJ_0130 PAJ_RS00645 157269 157967 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00645 PAJ_RS00650 PAJ_RS00650 PAJ_RS00650 158060 159550 + dGTPase gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00650 PAJ_RS00655 PAJ_0131 PAJ_RS00655 159684 161138 + serine endoprotease protease Do%3B required at high temperature%3B degrades damaged proteins gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00655 PAJ_RS00660 PAJ_0132 PAJ_RS00660 161315 162472 + transcriptional regulator regulates the expression of the operons for the enzymes involved in galactarate%2C glucarate and glycerate utilization gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00660 PAJ_RS00665 PAJ_0133 PAJ_RS00665 162505 163716 + hypothetical protein gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00665 PAJ_RS00670 PAJ_0134 PAJ_RS00670 163800 164192 - hypothetical protein gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00670 PAJ_RS00675 PAJ_0135 dapD dapD 164409 165233 - 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00675 PAJ_RS00680 PAJ_0136 PAJ_RS00680 165314 167962 - bifunctional uridylyltransferase/uridylyl-removing protein catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00680 PAJ_RS00685 PAJ_0137 PAJ_RS00685 168027 168821 - type I methionyl aminopeptidase catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00685 PAJ_RS00690 PAJ_0138 PAJ_RS00690 169140 169865 + 30S ribosomal protein S2 gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00690 PAJ_RS00695 PAJ_0140 tsf tsf 170049 170900 + elongation factor Ts EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00695 PAJ_RS00700 PAJ_0141 PAJ_RS00700 171055 171780 + UMP kinase gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00700 PAJ_RS00705 PAJ_0142 frr frr 171924 172481 + ribosome recycling factor Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00705 PAJ_RS00710 PAJ_0143 PAJ_RS00710 172592 173788 + 1-deoxy-D-xylulose-5-phosphate reductoisomerase catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00710 PAJ_RS00715 PAJ_0144 PAJ_RS00715 173966 174718 + (2E%2C6E)-farnesyl- diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00715 PAJ_RS00720 PAJ_0145 cdsA cdsA 174737 175594 + CDP-diglyceride synthase catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00720 PAJ_RS00725 PAJ_0146 PAJ_RS00725 175607 176956 + zinc metalloprotease catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00725 PAJ_RS00730 PAJ_0147 PAJ_RS00730 177008 179419 + outer membrane protein assembly factor BamA part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00730 PAJ_RS00735 PAJ_0148 PAJ_RS00735 179516 180016 + molecular chaperone gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00735 PAJ_RS00740 PAJ_0149 lpxD lpxD 180020 181045 + UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00740 PAJ_RS00745 PAJ_0150 PAJ_RS00745 181198 181653 + beta-hydroxyacyl-ACP dehydratase gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00745 PAJ_RS00750 PAJ_0151 PAJ_RS00750 181657 182445 + acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00750 PAJ_RS00755 PAJ_0152 lpxB lpxB 182449 183597 + lipid-A-disaccharide synthase catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00755 PAJ_RS00760 PAJ_0153 rnhB rnhB 183590 184216 + ribonuclease HII RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00760 PAJ_RS00765 PAJ_0154 dnaE dnaE 184245 187727 + DNA polymerase III subunit alpha catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00765 PAJ_RS00770 PAJ_0155 PAJ_RS00770 187740 188696 + acetyl-CoA carboxylase carboxyltransferase subunit alpha catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00770 PAJ_RS00775 PAJ_0157 PAJ_RS00775 188818 190965 + lysine decarboxylase CadA constitutive%3B catalyzes the formation of cadaverine from lysine gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00775 PAJ_RS00780 PAJ_0158 PAJ_RS00780 190995 191384 + hypothetical protein gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00780 PAJ_RS00785 PAJ_0159 tilS tilS 191432 192739 + tRNA(Ile)-lysidine synthetase Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00785 PAJ_RS00790 PAJ_RS00790 PAJ_RS00790 192739 193047 + cytochrome c554 gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00790 PAJ_RS00795 PAJ_0160 PAJ_RS00795 193085 193345 - Rho-binding antiterminator Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00795 PAJ_RS00800 PAJ_0161 PAJ_RS00800 193332 193532 - hypothetical protein gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00800 PAJ_RS00805 PAJ_0162 PAJ_RS00805 193750 194160 + aminoacyl-tRNA hydrolase gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00805 PAJ_RS00810 PAJ_0163 PAJ_RS00810 194279 195997 - proline--tRNA ligase catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00810 PAJ_RS00815 PAJ_0164 PAJ_RS00815 196086 196790 - tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00815 PAJ_RS00820 PAJ_0165 PAJ_RS00820 196787 197185 - hypothetical protein gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00820 PAJ_RS00825 PAJ_0166 metQ metQ 197312 198127 - methionine ABC transporter substrate-binding protein gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00825 PAJ_RS00830 PAJ_0167 PAJ_RS00830 198157 198810 - methionine ABC transporter permease part of the MetNIQ methionine uptake system gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00830 PAJ_RS00835 PAJ_0168 metN metN 198803 199834 - D-methionine ABC transporter%2C ATP-binding protein part of the metNIQ transport system for methionine gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00835 PAJ_RS00840 PAJ_0169 PAJ_RS00840 200023 200583 + D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00840 PAJ_RS00845 PAJ_r0001 PAJ_RS00845 200993 202542 + 16S ribosomal RNA rRNA gene168 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00845 PAJ_RS00850 PAJ_t0001 PAJ_RS00850 202627 202701 + tRNA-Glu tRNA gene169 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00850 PAJ_RS00855 PAJ_r0002 PAJ_RS00855 202902 205838 + 23S ribosomal RNA rRNA gene170 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00855 PAJ_RS00860 PAJ_r0003 rrf rrf 206048 206163 + 5S ribosomal RNA rRNA gene171 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00860 PAJ_RS00865 PAJ_t0002 PAJ_RS00865 206399 206475 + tRNA-Asp tRNA gene172 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00865 PAJ_RS00870 PAJ_0170 PAJ_RS00870 206590 207528 - LysR family transcriptional regulator gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00870 PAJ_RS00875 PAJ_0171 PAJ_RS00875 207813 208604 + hypothetical protein gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00875 PAJ_RS00880 PAJ_0172 mltD mltD 208722 210099 - lytic transglycosylase catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall%3B frameshifted gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00880 PAJ_RS00885 PAJ_RS00885 PAJ_RS00885 210171 210927 - hydroxyacylglutathione hydrolase catalyzes the hydrolysis of S-D-lactoylglutathione to D-lactic acid and reduced glutathione%3B plays an important role in cellular detoxification using glutathione%3B frameshifted gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00885 PAJ_RS00890 PAJ_0174 PAJ_RS00890 210970 211704 + hypothetical protein gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00890 PAJ_RS00895 PAJ_0175 PAJ_RS00895 211689 212156 - ribonuclease HI gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00895 PAJ_RS00900 PAJ_0176 PAJ_RS00900 212210 212941 + DNA polymerase III subunit epsilon 3'-5' exonuclease of DNA polymerase III gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00900 PAJ_RS00905 PAJ_t0003 PAJ_RS00905 213076 213152 + tRNA-Asp tRNA gene180 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00905 PAJ_RS00910 PAJ_0177 PAJ_RS00910 213306 213974 - fructose-bisphosphate aldolase similar to transaldolase from Escherichia coli%3B many organisms have multiple copies gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00910 PAJ_RS00915 PAJ_0178 PAJ_RS00915 214198 215697 - nitrate reductase gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00915 PAJ_RS00920 PAJ_0179 PAJ_RS00920 215840 216562 + GntR family transcriptional regulator gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00920 PAJ_RS00925 PAJ_0180 PAJ_RS00925 216559 217290 + Asp/Glu racemase gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00925 PAJ_RS00930 PAJ_0181 PAJ_RS00930 217325 218284 + allantoinase gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00930 PAJ_RS00935 PAJ_0182 PAJ_RS00935 218379 219110 - hypothetical protein gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00935 PAJ_RS00940 PAJ_0183 PAJ_RS00940 219154 219969 - flagellar motor switch protein FliY gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00940 PAJ_RS00945 PAJ_0184 PAJ_RS00945 219993 220865 - restriction endonuclease subunit S gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00945 PAJ_RS00950 PAJ_0185 PAJ_RS00950 220893 222416 - amino acid ABC transporter ATPase gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00950 PAJ_RS00955 PAJ_0186 PAJ_RS00955 222841 223752 + LysR family transcriptional regulator gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00955 PAJ_RS00960 PAJ_0187 PAJ_RS00960 223998 225263 + FAD-dependent oxidoreductase gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00960 PAJ_RS00965 PAJ_RS00965 PAJ_RS00965 225281 225715 + enamine deaminase RidA gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00965 PAJ_RS00970 PAJ_0188 PAJ_RS00970 225712 226386 + hypothetical protein gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00970 PAJ_RS00975 PAJ_0189 PAJ_RS00975 226364 227533 + acetylornithine deacetylase catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00975 PAJ_RS00980 PAJ_0190 PAJ_RS00980 227590 228363 - hypothetical protein gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00980 PAJ_RS00985 PAJ_0191 PAJ_RS00985 228462 229409 + DNA-binding transcriptional regulator gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00985 PAJ_RS00990 PAJ_RS00990 PAJ_RS00990 229489 229872 - hypothetical protein gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00990 PAJ_RS00995 PAJ_0192 PAJ_RS00995 229872 231269 - amidase catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS00995 PAJ_RS01000 PAJ_RS01000 PAJ_RS01000 231266 231448 - DUF4089 domain-containing protein gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01000 PAJ_RS01005 PAJ_0193 PAJ_RS01005 231461 233047 - gamma-glutamyltranspeptidase precursor Ggt gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01005 PAJ_RS01010 PAJ_0194 PAJ_RS01010 233204 234043 + RpiR family transcriptional regulator gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01010 PAJ_RS01015 PAJ_0195 PAJ_RS01015 234236 235021 + amino acid ABC transporter substrate-binding protein gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01015 PAJ_RS01020 PAJ_0196 PAJ_RS01020 235032 235697 + polar amino acid ABC transporter permease gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01020 PAJ_RS01025 PAJ_0197 PAJ_RS01025 235697 236353 + amino acid ABC transporter permease gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01025 PAJ_RS01030 PAJ_0198 PAJ_RS01030 236334 237065 + amino acid ABC transporter ATP-binding protein gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01030 PAJ_RS01035 PAJ_0199 PAJ_RS01035 237087 238322 + aminotransferase V gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01035 PAJ_RS01040 PAJ_0200 PAJ_RS01040 238319 239572 + Zn-dependent hydrolase gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01040 PAJ_RS01045 PAJ_0201 PAJ_RS01045 239574 240068 + OHCU decarboxylase gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01045 PAJ_RS01050 PAJ_0202 PAJ_RS01050 240065 240400 + hydroxyisourate hydrolase gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01050 PAJ_RS01055 PAJ_0203 PAJ_RS01055 240537 242735 + catalase/hydroperoxidase HPI(I) gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01055 PAJ_RS01060 PAJ_0204 PAJ_RS01060 242772 243545 - amidohydrolase NAD(P)-binding gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01060 PAJ_RS01065 PAJ_0205 PAJ_RS01065 243533 244693 - aminotransferase catalyzes the transfer of an amino moiety%3B preference for methionine followed by histidine and phenylalanine gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01065 PAJ_RS01070 PAJ_0206 PAJ_RS01070 244809 245423 + methylthioribulose-1-phosphate dehydratase catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01070 PAJ_RS01075 PAJ_0207 PAJ_RS01075 245420 246103 + 2%2C3-diketo-5-methylthio-1-phosphopentane phosphatase gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01075 PAJ_RS01080 PAJ_0208 PAJ_RS01080 246105 246647 + acireductone dioxygenase gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01080 PAJ_RS01085 PAJ_0209 PAJ_RS01085 246696 247718 - S-methyl-5-thioribose-1-phosphate isomerase gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01085 PAJ_RS01090 PAJ_0210 PAJ_RS01090 247856 249055 + S-methyl-5-thioribose kinase gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01090 PAJ_RS01095 PAJ_0211 fadE fadE 249087 251534 - acyl-CoA dehydrogenase functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01095 PAJ_RS01100 PAJ_0212 gmhA gmhA 251791 252369 + phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01100 PAJ_RS01105 PAJ_0213 PAJ_RS01105 252424 253197 + class II glutamine amidotransferase gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01105 PAJ_RS01110 PAJ_0214 PAJ_RS01110 253162 253902 - transpeptidase gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01110 PAJ_RS01115 PAJ_0215 PAJ_RS01115 254149 255204 + DNA polymerase IV involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01115 PAJ_RS01120 PAJ_RS01120 PAJ_RS01120 255793 255975 + hypothetical protein gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01120 PAJ_RS01125 PAJ_0216 PAJ_RS01125 256182 257249 - sugar ABC transporter substrate-binding protein gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01125 PAJ_RS01130 PAJ_0217 PAJ_RS01130 257280 258281 - sugar ABC transporter permease gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01130 PAJ_RS01135 PAJ_0218 PAJ_RS01135 258278 259783 - ABC transporter gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01135 PAJ_RS01140 PAJ_0219 PAJ_RS01140 260094 261065 - serine/threonine dehydratase gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01140 PAJ_RS01145 PAJ_0221 PAJ_RS01145 261093 262085 - ornithine cyclodeaminase gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01145 PAJ_RS01150 PAJ_0222 PAJ_RS01150 262359 263816 - aminoacyl-histidine dipeptidase catalyzes the hydrolysis of Xaa-His dipeptides gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01150 PAJ_RS01155 PAJ_RS01155 PAJ_RS01155 264069 264527 + xanthine phosphoribosyltransferase catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01155 PAJ_RS01160 PAJ_0224 frsA frsA 264643 265896 + fermentation/respiration switch protein forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01160 PAJ_RS01165 PAJ_0225 PAJ_RS01165 266016 266417 + sigma factor-binding protein Crl gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01165 PAJ_RS01170 PAJ_0226 PAJ_RS01170 266636 267778 - porin OmpC gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01170 PAJ_RS01175 PAJ_0227 PAJ_RS01175 268130 269233 + glutamate 5-kinase gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01175 PAJ_RS01180 PAJ_0228 PAJ_RS01180 269243 270496 + gamma-glutamyl-phosphate reductase gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01180 PAJ_RS01185 PAJ_0229 PAJ_RS01185 270857 271576 + chromophore lyase gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01185 PAJ_RS01190 PAJ_RS01190 PAJ_RS01190 271999 272277 + hypothetical protein gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01190 PAJ_RS01195 PAJ_0230 PAJ_RS01195 272474 272941 + hypothetical protein gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01195 PAJ_RS01200 PAJ_RS01200 PAJ_RS01200 272938 273285 + hypothetical protein gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01200 PAJ_RS01205 PAJ_RS01205 PAJ_RS01205 273282 273572 + hypothetical protein gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01205 PAJ_RS01210 PAJ_0231 PAJ_RS01210 273772 275520 + amylovoran biosynthesis protein AmsF precursor gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01210 PAJ_RS01215 PAJ_0232 PAJ_RS01215 276436 278847 + formate dehydrogenase-N subunit alpha gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01215 PAJ_RS01220 PAJ_0233 PAJ_RS01220 278859 279743 + formate dehydrogenase subunit beta beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit) gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01220 PAJ_RS01225 PAJ_0234 PAJ_RS01225 279736 280377 + formate dehydrogenase cytochrome b556(FDO) component%3B heme containing gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01225 PAJ_RS01230 PAJ_RS01230 PAJ_RS01230 281308 281697 - hypothetical protein gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01230 PAJ_RS01235 PAJ_0235 PAJ_RS01235 282084 282995 + aspartyl/asparaginyl beta-hydroxylase AspH gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01235 PAJ_RS01240 PAJ_0236 PAJ_RS01240 283063 284979 - sigma-54-dependent Fis family transcriptional regulator Positively regulates the dhaKLM operon from a sigma-70 promoter gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01240 PAJ_RS01245 PAJ_0237 gldA gldA 285077 286174 - glycerol dehydrogenase forms dimers and octamers%3B involved in conversion of glycerol to dihydroxy-acetone gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01245 PAJ_RS01250 PAJ_0238 PAJ_RS01250 286761 287831 + dihydroxyacetone kinase subunit DhaK with DhaL and DhaM forms dihydroxyacetone kinase%2C which is responsible for phosphorylating dihydroxyacetone%3B DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01250 PAJ_RS01255 PAJ_0239 PAJ_RS01255 287842 288474 + dihydroxyacetone kinase subunit DhaL with DhaK and DhaM catalyzes the phosphorylation of dihydroxyacetone gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01255 PAJ_RS01260 PAJ_0240 PAJ_RS01260 288485 289906 + dihydroxyacetone kinase subunit DhaM gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01260 PAJ_RS01265 PAJ_0241 PAJ_RS01265 290350 292014 + peptide transporter gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01265 PAJ_RS01270 PAJ_0242 PAJ_RS01270 292029 302429 + Contact-dependent inhibition of growth factor CdiA incomplete%3B partial in the middle of a contig%3B missing stop gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01270 PAJ_RS01275 PAJ_RS01275 PAJ_RS01275 303215 303646 + hypothetical protein gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01275 PAJ_RS01280 PAJ_0243 PAJ_RS01280 304006 305445 + filamentous hemagglutinin gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01280 PAJ_RS01285 PAJ_0244 PAJ_RS01285 305447 305956 + hypothetical protein gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01285 PAJ_RS01290 PAJ_RS01290 PAJ_RS01290 307263 307901 + hypothetical protein gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01290 PAJ_RS01295 PAJ_RS01295 PAJ_RS01295 307907 308320 + hypothetical protein gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01295 PAJ_RS01300 PAJ_0245 PAJ_RS01300 308398 309300 - LysR family transcriptional regulator gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01300 PAJ_RS01305 PAJ_0246 PAJ_RS01305 309403 310185 + NAD(P)H dehydrogenase gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01305 PAJ_RS01310 PAJ_0247 PAJ_RS01310 310451 310663 + cold-shock protein gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01310 PAJ_RS01315 PAJ_0248 PAJ_RS01315 311135 312097 - chemotaxis protein CheV gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01315 PAJ_RS01320 PAJ_0249 PAJ_RS01320 312258 312650 + hypothetical protein gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01320 PAJ_RS01325 PAJ_0250 PAJ_RS01325 312683 314062 - ATP-dependent RNA helicase exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01325 PAJ_RS01330 PAJ_RS01330 PAJ_RS01330 314471 314689 + hypothetical protein gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01330 PAJ_RS01335 PAJ_0251 PAJ_RS01335 314756 316138 - deaminase metallo-dependent hydrolase superfamily%3B deaminase with metallo-dependent hydrolase domain gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01335 PAJ_RS01340 PAJ_0252 PAJ_RS01340 316230 317090 - LysR family transcriptional regulator gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01340 PAJ_RS01345 PAJ_0253 PAJ_RS01345 317177 318340 + MFS transporter gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01345 PAJ_RS01350 PAJ_0254 PAJ_RS01350 318558 320213 + L-lactate permease gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01350 PAJ_RS01355 PAJ_0255 PAJ_RS01355 320210 320995 + transcriptional regulator LldR represses the lctPRD operon gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01355 PAJ_RS01360 PAJ_0256 lldD lldD 320995 322167 + alpha-hydroxy-acid oxidizing enzyme flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01360 PAJ_RS01365 PAJ_0257 PAJ_RS01365 322231 322659 + peroxiredoxin gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01365 PAJ_RS01370 PAJ_RS01370 PAJ_RS01370 322989 323219 - hypothetical protein gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01370 PAJ_RS01375 PAJ_RS01375 PAJ_RS01375 323318 323497 - hypothetical protein gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01375 PAJ_RS01380 PAJ_0258 PAJ_RS01380 323909 324217 + PTS sugar transporter subunit IIB gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01380 PAJ_RS01385 PAJ_0259 PAJ_RS01385 324301 325605 + PTS cellobiose transporter subunit IIC gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01385 PAJ_RS01390 PAJ_0260 PAJ_RS01390 325609 325923 + molecular chaperone TorD gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01390 PAJ_RS01395 PAJ_0261 PAJ_RS01395 325937 327367 + 6-phospho-beta-glucosidase gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01395 PAJ_RS01400 PAJ_0262 PAJ_RS01400 327393 328406 - transcriptional regulator gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01400 PAJ_RS01405 PAJ_0263 PAJ_RS01405 328501 329148 - hypothetical protein gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01405 PAJ_RS01410 PAJ_RS01410 PAJ_RS01410 329669 329965 + hypothetical protein gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01410 PAJ_RS01415 PAJ_RS01415 PAJ_RS01415 330174 330494 + hypothetical protein gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01415 PAJ_RS01420 PAJ_RS01420 PAJ_RS01420 330507 330758 - hypothetical protein gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01420 PAJ_RS01425 PAJ_RS01425 PAJ_RS01425 331156 331446 + hypothetical protein gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01425 PAJ_RS01430 PAJ_0264 PAJ_RS01430 331592 331846 + anti-RssB factor gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01430 PAJ_RS01435 PAJ_0265 PAJ_RS01435 331966 332268 + phosphate starvation-inducible protein PsiF gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01435 PAJ_RS01440 PAJ_0266 PAJ_RS01440 332491 334023 + hypothetical protein gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01440 PAJ_RS01445 PAJ_0267 PAJ_RS01445 334073 334885 - pyrroline-5-carboxylate reductase catalyzes the formation of L-proline from pyrroline-5-carboxylate gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01445 PAJ_RS01450 PAJ_0268 PAJ_RS01450 335182 335631 + hypothetical protein gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01450 PAJ_RS01455 PAJ_0269 PAJ_RS01455 335633 336352 - hypothetical protein gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01455 PAJ_RS01460 PAJ_0270 PAJ_RS01460 336635 337159 + shikimate kinase II gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01460 PAJ_RS01465 PAJ_0271 PAJ_RS01465 337271 337462 + hypothetical protein gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01465 PAJ_RS01470 PAJ_0272 PAJ_RS01470 337615 337905 + hypothetical protein gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01470 PAJ_RS01475 PAJ_0273 PAJ_RS01475 337941 338852 - recombination-associated protein RdgC Required for efficient pilin antigenic variation gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01475 PAJ_RS01480 PAJ_0274 PAJ_RS01480 338997 339902 + fructokinase catalyzes phosphorylation of fructose%3B cytosolic enzyme gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01480 PAJ_RS01485 PAJ_0275 PAJ_RS01485 339958 340329 - cell envelope integrity/translocation protein TolA gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01485 PAJ_RS01490 PAJ_0276 PAJ_RS01490 340340 344014 - exonuclease SbcC gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01490 PAJ_RS01495 PAJ_0277 PAJ_RS01495 344011 345207 - exonuclease sbcCD subunit D with SbcC cleaves DNA hairpin structure%2C also has 5' single-strand endonuclease activity gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01495 PAJ_RS01500 PAJ_0278 PAJ_RS01500 345405 346094 + DNA-binding response regulator two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01500 PAJ_RS01505 PAJ_0279 phoR phoR 346109 347422 + PAS domain-containing sensor histidine kinase membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01505 PAJ_RS01510 PAJ_0280 PAJ_RS01510 347442 348362 + phosphate ABC transporter substrate-binding protein gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01510 PAJ_RS01515 PAJ_0281 PAJ_RS01515 348682 349785 + 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01515 PAJ_RS01520 PAJ_0282 PAJ_RS01520 350176 351495 + branched-chain amino acid transport system II carrier protein sodium:branched-chain amino acid symporter gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01520 PAJ_RS01525 PAJ_0284 proY proY 351566 352912 + proline-specific permease ProY cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01525 PAJ_RS01530 PAJ_RS01530 PAJ_RS01530 352891 353121 - hypothetical protein gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01530 PAJ_RS01535 PAJ_0285 PAJ_RS01535 353152 354420 - glucose-1-phosphatase precursor Agp gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01535 PAJ_RS01540 PAJ_0286 PAJ_RS01540 354420 355232 - inositol-1-monophosphatase SuhB gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01540 PAJ_RS01545 PAJ_0287 PAJ_RS01545 355453 356034 - ACP phosphodiesterase Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01545 PAJ_RS01550 PAJ_0288 queA queA 356136 357206 + tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01550 PAJ_RS01555 PAJ_0289 tgt tgt 357251 358399 + tRNA-guanine(34) transglycosylase Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr) gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01555 PAJ_RS01560 PAJ_0290 yajC yajC 358399 358731 + preprotein translocase subunit YajC member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01560 PAJ_RS01565 PAJ_0291 secD secD 358790 360604 + preprotein translocase subunit SecD part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01565 PAJ_RS01570 PAJ_0292 PAJ_RS01570 360615 361583 + preprotein translocase subunit SecF gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01570 PAJ_RS01575 PAJ_0293 PAJ_RS01575 361639 362196 - hypothetical protein gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01575 PAJ_RS01580 PAJ_0294 PAJ_RS01580 362725 363174 + transcriptional regulator NrdR gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01580 PAJ_RS01585 PAJ_0295 ribD ribD 363178 364281 + bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01585 PAJ_RS01590 PAJ_0296 ribH ribH 364373 364843 + 6%2C7-dimethyl-8-ribityllumazine synthase RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01590 PAJ_RS01595 PAJ_0297 nusB nusB 364863 365282 + N utilization substance protein B Regulates rRNA biosynthesis by transcriptional antitermination gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01595 PAJ_RS01600 PAJ_0298 PAJ_RS01600 365337 366314 + thiamine-monophosphate kinase catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01600 PAJ_RS01605 PAJ_0299 PAJ_RS01605 366301 366798 + phosphatidylglycerophosphatase A hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01605 PAJ_RS01610 PAJ_0301 PAJ_RS01610 366950 367924 - oxidoreductase gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01610 PAJ_RS01615 PAJ_0302 PAJ_RS01615 368002 369867 - 1-deoxy-D-xylulose-5-phosphate synthase catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01615 PAJ_RS01620 PAJ_0303 PAJ_RS01620 369887 370786 - geranyltranstransferase gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01620 PAJ_RS01625 PAJ_0304 PAJ_RS01625 370786 371028 - exodeoxyribonuclease VII small subunit catalyzes the bidirectional exonucleolytic cleavage of DNA gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01625 PAJ_RS01630 PAJ_0305 PAJ_RS01630 371261 372709 + tRNA 4-thiouridine(8) synthase ThiI catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01630 PAJ_RS01635 PAJ_0306 PAJ_RS01635 372785 373384 - oxidative-stress-resistance chaperone gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01635 PAJ_RS01640 PAJ_0307 PAJ_RS01640 373338 374258 - 2-dehydropantoate 2-reductase ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01640 PAJ_RS01645 PAJ_0308 PAJ_RS01645 374392 374883 + YajQ family cyclic di-GMP-binding protein nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01645 PAJ_RS01650 PAJ_0309 PAJ_RS01650 374886 376661 - sigma-54-dependent Fis family transcriptional regulator gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01650 PAJ_RS01655 PAJ_0310 PAJ_RS01655 376935 378455 + aldehyde dehydrogenase gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01655 PAJ_RS01660 PAJ_0311 PAJ_RS01660 378485 379525 + zinc-dependent alcohol dehydrogenase gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01660 PAJ_RS01665 PAJ_0312 PAJ_RS01665 379660 381024 - membrane protein gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01665 PAJ_RS01670 PAJ_0313 PAJ_RS01670 381157 382044 - protoheme IX farnesyltransferase converts protoheme IX and farnesyl diphosphate to heme O gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01670 PAJ_RS01675 PAJ_0314 PAJ_RS01675 382057 382386 - cytochrome o ubiquinol oxidase subunit IV gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01675 PAJ_RS01680 PAJ_0315 PAJ_RS01680 382386 383000 - cytochrome o ubiquinol oxidase subunit III gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01680 PAJ_RS01685 PAJ_0316 PAJ_RS01685 383000 384982 - cytochrome ubiquinol oxidase subunit I gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01685 PAJ_RS01690 PAJ_0317 PAJ_RS01690 384987 385913 - cytochrome ubiquinol oxidase subunit II gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01690 PAJ_RS01695 PAJ_0318 ampG ampG 386347 387835 - AmpG family muropeptide MFS transporter in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein%3B frameshifted gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01695 PAJ_RS01700 PAJ_0319 PAJ_RS01700 387882 388460 - hypothetical protein gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01700 PAJ_RS01705 PAJ_0320 PAJ_RS01705 388724 389038 + BolA family transcriptional regulator positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01705 PAJ_RS01710 PAJ_0322 PAJ_RS01710 389333 390637 + trigger factor gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01710 PAJ_RS01715 PAJ_0323 PAJ_RS01715 390972 391595 + ATP-dependent Clp protease proteolytic subunit gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01715 PAJ_RS01720 PAJ_0324 clpX clpX 391728 392999 + ATP-dependent Clp protease ATP-binding subunit ClpX binds and unfolds substrates as part of the ClpXP protease gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01720 PAJ_RS01725 PAJ_0325 PAJ_RS01725 393185 395539 + endopeptidase La gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01725 PAJ_RS01730 PAJ_0326 PAJ_RS01730 395755 396027 + transcriptional regulator histone-like DNA-binding protein gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01730 PAJ_RS01735 PAJ_RS01735 PAJ_RS01735 396278 398148 + molecular chaperone frameshifted gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01735 PAJ_RS01740 PAJ_0328 PAJ_RS01740 398288 398611 + hypothetical protein gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01740 PAJ_RS01745 PAJ_0329 PAJ_RS01745 398710 399108 + thioesterase gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01745 PAJ_RS01750 PAJ_0330 PAJ_RS01750 399179 399874 - 7-cyano-7-deazaguanine synthase QueC YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01750 PAJ_RS01755 PAJ_0331 PAJ_RS01755 400001 401035 - cysteine synthase gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01755 PAJ_RS01760 PAJ_0332 PAJ_RS01760 401153 401614 + transcriptional regulator gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01760 PAJ_RS01765 PAJ_0333 PAJ_RS01765 401639 403408 + multidrug ABC transporter permease/ATP-binding protein gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01765 PAJ_RS01770 PAJ_0334 PAJ_RS01770 403401 405176 + multidrug ABC transporter permease/ATP-binding protein gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01770 PAJ_RS01775 PAJ_0335 PAJ_RS01775 405434 405772 + nitrogen regulatory protein P-II 2 indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01775 PAJ_RS01780 PAJ_0336 PAJ_RS01780 405806 407095 + ammonium transporter gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01780 PAJ_RS01785 PAJ_0337 PAJ_RS01785 407142 408005 - acyl-CoA thioesterase II gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01785 PAJ_RS01790 PAJ_0338 PAJ_RS01790 408198 408755 + hypothetical protein gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01790 PAJ_RS01795 PAJ_0339 PAJ_RS01795 408804 409115 - methylated-DNA--protein-cysteine methyltransferase gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01795 PAJ_RS01800 PAJ_RS01800 ffs ffs 409278 409374 + signal recognition particle sRNA small type ncRNA gene359 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01800 PAJ_RS01805 PAJ_0340 PAJ_RS01805 409513 409728 - transcriptional regulator with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01805 PAJ_RS01810 PAJ_0341 PAJ_RS01810 409753 410130 - hypothetical protein gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01810 PAJ_RS01815 PAJ_RS01815 PAJ_RS01815 410277 410630 - hypothetical protein gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01815 PAJ_RS01820 PAJ_0342 PAJ_RS01820 410984 411652 + Metal ABC transporter ATP-binding protein MntB gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01820 PAJ_RS01825 PAJ_0343 PAJ_RS01825 411649 412488 + iron ABC transporter gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01825 PAJ_RS01830 PAJ_0344 PAJ_RS01830 412501 413379 + metal ABC transporter substrate-binding protein gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01830 PAJ_RS01835 PAJ_0345 rpmJ rpmJ 413439 413579 - 50S ribosomal protein L36 smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01835 PAJ_RS01840 PAJ_0346 PAJ_RS01840 413591 413845 - 50S ribosomal protein L31 gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01840 PAJ_RS01845 PAJ_0347 PAJ_RS01845 414134 417283 - multidrug efflux RND transporter permease subunit gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01845 PAJ_RS01850 PAJ_0348 PAJ_RS01850 417300 418505 - MexE family multidrug efflux RND transporter periplasmic adaptor subunit with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01850 PAJ_RS01855 PAJ_0349 PAJ_RS01855 418648 419286 + DNA-binding transcriptional repressor AcrR regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01855 PAJ_RS01860 PAJ_0351 PAJ_RS01860 419514 420044 - primosomal replication protein N' PriC gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01860 PAJ_RS01865 PAJ_0352 PAJ_RS01865 420102 420491 + hypothetical protein gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01865 PAJ_RS01870 PAJ_0353 PAJ_RS01870 420643 421194 + adenine phosphoribosyltransferase catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01870 PAJ_RS01875 PAJ_0354 PAJ_RS01875 421352 423322 + DNA polymerase III subunit gamma/tau catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01875 PAJ_RS01880 PAJ_0355 PAJ_RS01880 423379 423708 + hypothetical protein gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01880 PAJ_RS01885 PAJ_0356 recR recR 423708 424313 + recombination protein RecR involved in a recombinational process of DNA repair%2C independent of the recBC complex gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01885 PAJ_RS01890 PAJ_0358 PAJ_RS01890 424412 426286 + molecular chaperone HtpG molecular chaperone gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01890 PAJ_RS01895 PAJ_0359 adk adk 426565 427209 + adenylate kinase essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01895 PAJ_RS01900 PAJ_0360 PAJ_RS01900 427443 428744 + inosine/guanosine kinase catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01900 PAJ_RS01905 PAJ_0361 PAJ_RS01905 428799 430496 - Kef family K(+) transporter YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01905 PAJ_RS01910 PAJ_0362 ushA ushA 431259 433025 + bifunctional metallophosphatase/5'-nucleotidase catalyzes the degradation of periplasmic UDP-glucose to uridine%2C glucose-1-phosphate and inorganic phosphate%3B specific for uridine nucleotides gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01910 PAJ_RS01915 PAJ_RS01915 PAJ_RS01915 433059 433490 - Na+-translocating NADH-quinone reductase subunit E gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01915 PAJ_RS01920 PAJ_0363 PAJ_RS01920 433578 434447 + transcriptional regulator gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01920 PAJ_RS01925 PAJ_0364 PAJ_RS01925 434444 434923 - aminoacyl-tRNA deacylase gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01925 PAJ_RS01930 PAJ_0365 PAJ_RS01930 435107 435910 - hypothetical protein gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01930 PAJ_RS01935 PAJ_0366 copA copA 435986 438496 - Cu+ exporting ATPase gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01935 PAJ_RS01940 PAJ_RS01940 PAJ_RS01940 438787 439017 + hypothetical protein gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01940 PAJ_RS01945 PAJ_RS01945 PAJ_RS01945 438998 439330 - hypothetical protein gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01945 PAJ_RS01950 PAJ_0367 PAJ_RS01950 439753 440169 + Cu(I)-responsive transcriptional regulator activator of copper-responsive regulon genes gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01950 PAJ_RS01955 PAJ_0368 PAJ_RS01955 440145 440603 - membrane protein gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01955 PAJ_RS01960 PAJ_0369 PAJ_RS01960 440603 441517 - protease gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01960 PAJ_RS01965 PAJ_0370 PAJ_RS01965 441576 442433 - co-chaperone YbbN gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01965 PAJ_RS01970 PAJ_0371 PAJ_RS01970 442513 443286 - short-chain dehydrogenase/reductase gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01970 PAJ_RS01975 PAJ_0372 PAJ_RS01975 443307 443960 - arylesterase gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01975 PAJ_RS01980 PAJ_0373 PAJ_RS01980 443898 444584 + ABC transporter ATP-binding protein gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01980 PAJ_RS01985 PAJ_0374 PAJ_RS01985 444581 446998 + sugar ABC transporter permease gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01985 PAJ_RS01990 PAJ_0375 PAJ_RS01990 447042 448106 - 5-(carboxyamino)imidazole ribonucleotide synthase gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01990 PAJ_RS01995 PAJ_0376 purE purE 448103 448612 - 5-(carboxyamino)imidazole ribonucleotide mutase catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS01995 PAJ_RS02000 PAJ_0377 PAJ_RS02000 448880 450202 + hypothetical protein gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02000 PAJ_RS02005 PAJ_0378 PAJ_RS02005 450178 450894 - UDP-2%2C3-diacylglucosamine diphosphatase catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02005 PAJ_RS02010 PAJ_0379 PAJ_RS02010 450894 451388 - peptidyl-prolyl cis-trans isomerase gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02010 PAJ_RS02015 PAJ_0380 cysS cysS 451603 452988 + cysteine--tRNA ligase catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02015 PAJ_RS02020 PAJ_0381 PAJ_RS02020 453031 454137 + hypothetical protein gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02020 PAJ_RS02025 PAJ_0382 PAJ_RS02025 454166 454378 - ribosome-associated protein gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02025 PAJ_RS02030 PAJ_0383 PAJ_RS02030 454378 455244 - bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/5%2C10-methylene-tetrahydrofolate cyclohydrolase gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02030 PAJ_RS02035 PAJ_0384 PAJ_RS02035 455419 455922 + hypothetical protein gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02035 PAJ_RS02040 PAJ_t0004 PAJ_RS02040 456017 456093 + tRNA-Arg tRNA gene407 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02040 PAJ_RS02045 PAJ_RS02045 PAJ_RS02045 456376 456813 - hypothetical protein gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02045 PAJ_RS02050 PAJ_RS02050 PAJ_RS02050 456816 457097 - hypothetical protein gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02050 PAJ_RS02055 PAJ_RS02055 PAJ_RS02055 457134 457370 + hypothetical protein gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02055 PAJ_RS02060 PAJ_RS02060 PAJ_RS02060 457823 458269 + hypothetical protein gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02060 PAJ_RS02065 PAJ_0385 PAJ_RS02065 459066 460508 - hypothetical protein gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02065 PAJ_RS02070 PAJ_0386 PAJ_RS02070 460522 461433 - bactoprenol glucosyl transferase gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02070 PAJ_RS02075 PAJ_0387 PAJ_RS02075 461430 461795 - translocase gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02075 PAJ_RS02080 PAJ_0388 PAJ_RS02080 462456 464195 + UDP phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02080 PAJ_RS02085 PAJ_RS02085 PAJ_RS02085 464284 464727 - hypothetical protein gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02085 PAJ_RS02090 PAJ_0389 PAJ_RS02090 466216 467907 + transporter gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02090 PAJ_RS02095 PAJ_0390 PAJ_RS02095 467965 478437 + filamentous hemagglutinin gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02095 PAJ_RS02100 PAJ_0391 PAJ_RS02100 478424 478879 + hypothetical protein gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02100 PAJ_RS02105 PAJ_0392 PAJ_RS02105 479258 479974 + hypothetical protein gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02105 PAJ_RS02110 PAJ_0393 PAJ_RS02110 479964 480578 + hypothetical protein gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02110 PAJ_RS02115 PAJ_0394 PAJ_RS02115 480932 481423 + adhesin/hemagglutinin gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02115 PAJ_RS02120 PAJ_RS02120 PAJ_RS02120 481410 481667 + hypothetical protein gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02120 PAJ_RS02125 PAJ_RS02125 PAJ_RS02125 481802 481996 + hypothetical protein gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02125 PAJ_RS02130 PAJ_RS02130 PAJ_RS02130 482125 482526 + hypothetical protein gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02130 PAJ_RS02135 PAJ_RS02135 PAJ_RS02135 482822 483193 - hypothetical protein gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02135 PAJ_RS02140 PAJ_RS02140 PAJ_RS02140 483788 484567 + hypothetical protein gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02140 PAJ_RS02145 PAJ_RS02145 PAJ_RS02145 484564 484815 + hypothetical protein gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02145 PAJ_RS02150 PAJ_RS02150 PAJ_RS02150 485400 485666 - transposase gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02150 PAJ_RS02155 PAJ_RS02155 PAJ_RS02155 486593 487030 - hypothetical protein gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02155 PAJ_RS02160 PAJ_RS02160 PAJ_RS02160 487196 487411 - hypothetical protein gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02160 PAJ_RS02165 PAJ_RS02165 PAJ_RS02165 487776 488024 - hypothetical protein gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02165 PAJ_RS02170 PAJ_0397 PAJ_RS02170 488380 492213 - type IV secretion protein Rhs incomplete%3B partial in the middle of a contig%3B missing stop gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02170 PAJ_RS02175 PAJ_RS02175 PAJ_RS02175 492231 492668 - hypothetical protein gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02175 PAJ_RS02180 PAJ_RS02180 PAJ_RS02180 493033 493404 + hypothetical protein internal stop gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02180 PAJ_RS02185 PAJ_0398 PAJ_RS02185 493429 495057 + ABC transporter substrate-binding protein is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02185 PAJ_RS02190 PAJ_0399 PAJ_RS02190 495420 496451 + hypothetical protein gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02190 PAJ_RS02195 PAJ_RS02195 PAJ_RS02195 496554 496823 + hypothetical protein gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02195 PAJ_RS02200 PAJ_0400 PAJ_RS02200 497171 497869 + hypothetical protein gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02200 PAJ_RS02205 PAJ_0401 PAJ_RS02205 498822 500243 - fucose isomerase gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02205 PAJ_RS02210 PAJ_0402 PAJ_RS02210 500722 502071 + hypothetical protein gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02210 PAJ_RS02215 PAJ_0403 PAJ_RS02215 502087 503381 + hypothetical protein frameshifted gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02215 PAJ_RS02220 PAJ_0404 PAJ_RS02220 503438 504457 + NagC family transcriptional regulator gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02220 PAJ_RS02225 PAJ_0405 PAJ_RS02225 504557 506167 - FAD/NAD(P) binding domain-containing protein gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02225 PAJ_RS02230 PAJ_0406 PAJ_RS02230 506480 509437 - adhesin autotransporter YdeU gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02230 PAJ_RS02235 PAJ_0407 PAJ_RS02235 510954 511742 + hypothetical protein gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02235 PAJ_RS02240 PAJ_0408 PAJ_RS02240 512594 514012 + arabinose:proton symporter gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02240 PAJ_RS02245 PAJ_0409 PAJ_RS02245 514736 515278 + fimbrial A protein gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02245 PAJ_RS02250 PAJ_0410 PAJ_RS02250 515481 515915 + hypothetical protein gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02250 PAJ_RS02255 PAJ_0411 PAJ_RS02255 515927 518452 + fimbrial protein SteB gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02255 PAJ_RS02260 PAJ_0412 PAJ_RS02260 518559 519299 + fimbrial protein StfD gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02260 PAJ_RS02265 PAJ_0414 PAJ_RS02265 519918 520478 + fimbrial protein gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02265 PAJ_RS02270 PAJ_0415 PAJ_RS02270 520478 521104 + hypothetical protein gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02270 PAJ_RS02275 PAJ_RS02275 PAJ_RS02275 521114 521693 + hypothetical protein frameshifted gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02275 PAJ_RS02280 PAJ_0416 PAJ_RS02280 521686 522675 + hypothetical protein gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02280 PAJ_RS02285 PAJ_0417 PAJ_RS02285 523951 524613 + diguanylate phosphodiesterase gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02285 PAJ_RS02290 PAJ_RS02290 PAJ_RS02290 524815 525150 + hypothetical protein gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02290 PAJ_RS02295 PAJ_0418 PAJ_RS02295 525298 525996 - hypothetical protein gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02295 PAJ_RS02300 PAJ_0419 PAJ_RS02300 526251 527505 + PbsX family transcriptional regulator frameshifted gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02300 PAJ_RS02305 PAJ_0420 PAJ_RS02305 527562 528071 - hypothetical protein gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02305 PAJ_RS02310 PAJ_0421 PAJ_RS02310 528638 529363 + hypothetical protein gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02310 PAJ_RS02315 PAJ_0422 PAJ_RS02315 529360 530253 - lipid kinase similar to YegS from E. coli gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02315 PAJ_RS02320 PAJ_RS02320 PAJ_RS02320 530433 530702 + cupin gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02320 PAJ_RS02325 PAJ_0423 PAJ_RS02325 530721 531158 + hypothetical protein internal stop gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02325 PAJ_RS02330 PAJ_RS02330 PAJ_RS02330 531298 531615 + hypothetical protein gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02330 PAJ_RS02335 PAJ_0424 PAJ_RS02335 531662 532855 - AI-2E family transporter gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02335 PAJ_RS02340 PAJ_0425 PAJ_RS02340 533265 534530 + phosphoesterase PA-phosphatase gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02340 PAJ_RS02345 PAJ_0426 PAJ_RS02345 534563 535756 - glutathione-dependent formaldehyde dehydrogenase gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02345 PAJ_RS02350 PAJ_0427 PAJ_RS02350 536159 537445 + HAAAP family serine/threonine permease gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02350 PAJ_RS02355 PAJ_0428 PAJ_RS02355 537606 538700 + ABC transporter substrate-binding protein gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02355 PAJ_RS02360 PAJ_0429 PAJ_RS02360 539193 539627 + hypothetical protein gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02360 PAJ_RS02365 PAJ_0430 PAJ_RS02365 539731 540585 + sugar phosphatase SupH gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02365 PAJ_RS02370 PAJ_0431 PAJ_RS02370 540605 541753 - alcohol dehydrogenase gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02370 PAJ_RS02375 PAJ_0432 PAJ_RS02375 542043 543359 + idonate transporter gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02375 PAJ_RS02380 PAJ_RS02380 PAJ_RS02380 543410 543655 - hypothetical protein gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02380 PAJ_RS02385 PAJ_RS02385 PAJ_RS02385 544479 544667 + hypothetical protein gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02385 PAJ_RS02390 PAJ_0434 PAJ_RS02390 544675 545247 + phospholipid:lipid A palmitoyltransferase gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02390 PAJ_RS02395 PAJ_0435 PAJ_RS02395 545398 545607 + cold-shock protein CspE gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02395 PAJ_RS02400 PAJ_0436 PAJ_RS02400 545950 546381 + GNAT family N-acetyltransferase gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02400 PAJ_RS02405 PAJ_0437 PAJ_RS02405 546476 547243 + hydrolase gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02405 PAJ_RS02410 PAJ_0438 tatE tatE 547394 547597 + sec-independent protein translocase tatE TatE%3B similar to TatA and found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02410 PAJ_RS02415 PAJ_0439 PAJ_RS02415 547708 548673 - lipoyl synthase catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02415 PAJ_RS02420 PAJ_0440 PAJ_RS02420 548848 549501 - octanoyltransferase lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02420 PAJ_RS02425 PAJ_0441 PAJ_RS02425 549670 549933 - hypothetical protein gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02425 PAJ_RS02430 PAJ_0442 PAJ_RS02430 550034 551245 - serine-type D-Ala-D-Ala carboxypeptidase penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02430 PAJ_RS02435 PAJ_0443 PAJ_RS02435 551378 552541 - rare lipoprotein A septal ring protein%2C suppressor of prc%2C minor lipoprotein gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02435 PAJ_RS02440 PAJ_0444 PAJ_RS02440 552552 553664 - cell wall shape-determining protein gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02440 PAJ_RS02445 PAJ_0445 PAJ_RS02445 553673 555577 - penicillin-binding protein 2 gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02445 PAJ_RS02450 PAJ_0446 PAJ_RS02450 555612 556082 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02450 PAJ_RS02455 PAJ_0447 PAJ_RS02455 556086 556403 - ribosome silencing factor RsfS gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02455 PAJ_RS02460 PAJ_0448 PAJ_RS02460 556493 557134 - nicotinate-nicotinamide nucleotide adenylyltransferase gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02460 PAJ_RS02465 PAJ_0449 holA holA 557127 558158 - DNA polymerase III subunit delta required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02465 PAJ_RS02470 PAJ_0450 PAJ_RS02470 558155 558754 - LPS assembly lipoprotein LptE rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02470 PAJ_RS02475 PAJ_0451 leuS leuS 558769 561351 - leucine--tRNA ligase leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02475 PAJ_RS02480 PAJ_0452 PAJ_RS02480 561574 562056 + hypothetical protein gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02480 PAJ_RS02485 PAJ_0453 artP artP 562090 562815 - arginine ABC transporter ATP-binding protein With ArtMQJI transports arginine across the inner membrane gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02485 PAJ_RS02490 PAJ_0454 PAJ_RS02490 562816 563493 - glutamate/aspartate transporter permease GltK with GltJLPS and GadC for glutamate and GltJLP%2C DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02490 PAJ_RS02495 PAJ_0455 PAJ_RS02495 563493 564233 - glutamate/aspartate ABC transporter permease GltJ with GltIKL is involved in the transport of glutamate and aspartate gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02495 PAJ_RS02500 PAJ_0456 PAJ_RS02500 564387 565283 - glutamate/aspartate ABC transporter substrate-binding protein gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02500 PAJ_RS02505 PAJ_0457 lnt lnt 565753 567276 - apolipoprotein N-acyltransferase Transfers the fatty acyl group on membrane lipoproteins gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02505 PAJ_RS02510 PAJ_0458 PAJ_RS02510 567281 568162 - cobalt transporter involved in the transport of magnesium and cobalt ions gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02510 PAJ_RS02515 PAJ_0459 PAJ_RS02515 568244 568717 - rRNA maturation RNase YbeY gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02515 PAJ_RS02520 PAJ_0460 PAJ_RS02520 568714 569775 - nucleoside triphosphate hydrolase gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02520 PAJ_RS02525 PAJ_0462 PAJ_RS02525 569983 571407 - tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02525 PAJ_RS02530 PAJ_0463 ubiF ubiF 571576 572748 + 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02530 PAJ_RS02535 PAJ_t0005 PAJ_RS02535 572844 572918 - tRNA-Gln tRNA gene506 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02535 PAJ_RS02540 PAJ_t0006 PAJ_RS02540 572946 573020 - tRNA-Gln tRNA gene507 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02540 PAJ_RS02545 PAJ_t0007 PAJ_RS02545 573027 573103 - tRNA-Met tRNA gene508 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02545 PAJ_RS02550 PAJ_t0008 PAJ_RS02550 573126 573200 - tRNA-Gln tRNA gene509 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02550 PAJ_RS02555 PAJ_t0009 PAJ_RS02555 573235 573309 - tRNA-Gln tRNA gene510 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02555 PAJ_RS02560 PAJ_t0010 PAJ_RS02560 573332 573416 - tRNA-Leu tRNA gene511 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02560 PAJ_RS02565 PAJ_t0011 PAJ_RS02565 573427 573503 - tRNA-Met tRNA gene512 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02565 PAJ_RS02570 PAJ_0464 asnB asnB 573722 575389 - asparagine synthase B functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02570 PAJ_RS02575 PAJ_0465 PAJ_RS02575 575694 576446 - UMP phosphatase gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02575 PAJ_RS02580 PAJ_0466 PAJ_RS02580 576487 577707 - transcriptional regulator regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02580 PAJ_RS02585 PAJ_0467 nagA nagA 577715 578863 - N-acetylglucosamine-6-phosphate deacetylase catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02585 PAJ_RS02590 PAJ_0468 nagB nagB 578924 579724 - glucosamine-6-phosphate deaminase catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02590 PAJ_RS02595 PAJ_0469 PAJ_RS02595 580050 582086 + PTS N-acetylglucosamine transporter subunit IIABC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02595 PAJ_RS02600 PAJ_0470 PAJ_RS02600 582238 583905 + glutamine--tRNA ligase catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02600 PAJ_RS02605 PAJ_RS02605 PAJ_RS02605 584137 584532 + hypothetical protein gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02605 PAJ_RS02610 PAJ_0471 fur fur 584593 585036 - transcriptional repressor negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02610 PAJ_RS02615 PAJ_0472 PAJ_RS02615 585372 585902 - flavodoxin An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02615 PAJ_RS02620 PAJ_0473 PAJ_RS02620 586025 586309 - LexA regulated protein gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02620 PAJ_RS02625 PAJ_0474 PAJ_RS02625 586476 587240 - acyl-CoA esterase gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02625 PAJ_RS02630 PAJ_0475 PAJ_RS02630 587493 588044 + negative modulator of initiation of replication gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02630 PAJ_RS02635 PAJ_0476 PAJ_RS02635 588070 589710 + phosphoglucomutase%2C alpha-D-glucose phosphate-specific catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02635 PAJ_RS02640 PAJ_0477 PAJ_RS02640 589752 590426 - DNA-binding response regulator response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02640 PAJ_RS02645 PAJ_0478 PAJ_RS02645 590681 590881 + membrane protein gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02645 PAJ_RS02650 PAJ_0479 PAJ_RS02650 591056 592015 + membrane protein gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02650 PAJ_RS02655 PAJ_0480 PAJ_RS02655 592028 593455 + deoxyribodipyrimidine photo-lyase UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02655 PAJ_RS02660 PAJ_0481 PAJ_RS02660 593473 594216 + Nif3-like dinuclear metal center hexameric protein gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02660 PAJ_RS02665 PAJ_0482 PAJ_RS02665 594374 595030 + hypothetical protein gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02665 PAJ_RS02670 PAJ_0483 PAJ_RS02670 595024 595956 + hypothetical protein gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02670 PAJ_RS02675 PAJ_0484 PAJ_RS02675 595946 596683 + LamB/YcsF family protein gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02675 PAJ_RS02680 PAJ_0485 PAJ_RS02680 596742 597470 + membrane protein gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02680 PAJ_RS02685 PAJ_0486 PAJ_RS02685 597470 598486 + membrane protein gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02685 PAJ_RS02690 PAJ_0487 PAJ_RS02690 598493 599140 + pyroglutamyl-peptidase I gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02690 PAJ_RS02695 PAJ_0488 PAJ_RS02695 599152 599940 + endonuclease VII 5-formyluracil/5-hydroxymethyluracil DNA glycosylase%3B involved in base excision repair of DNA damaged by oxidation or by mutagenic agents%3B acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines%3B has apurinic/apyrimidinic lyase activity gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02695 PAJ_RS02700 PAJ_0489 PAJ_RS02700 600007 600579 + hypothetical protein gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02700 PAJ_RS02705 PAJ_0490 gltA gltA 600737 602020 - citrate (Si)-synthase type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02705 PAJ_RS02710 PAJ_0491 PAJ_RS02710 602644 603033 + succinate dehydrogenase gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02710 PAJ_RS02715 PAJ_0492 sdhD sdhD 603027 603374 + succinate dehydrogenase cytochrome b556 small membrane subunit gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02715 PAJ_RS02720 PAJ_0493 sdhA sdhA 603375 605141 + succinate dehydrogenase flavoprotein subunit part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02720 PAJ_RS02725 PAJ_0495 sdhB sdhB 605156 605872 + succinate dehydrogenase iron-sulfur subunit part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02725 PAJ_RS02730 PAJ_0496 PAJ_RS02730 606073 608880 + 2-oxoglutarate dehydrogenase subunit E1 gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02730 PAJ_RS02735 PAJ_0497 PAJ_RS02735 608896 610119 + dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02735 PAJ_RS02740 PAJ_0498 sucC sucC 610188 611354 + succinate--CoA ligase subunit beta catalyzes the interconversion of succinyl-CoA and succinate gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02740 PAJ_RS02745 PAJ_0500 PAJ_RS02745 611354 612229 + succinate--CoA ligase subunit alpha Catalyzes the only substrate-level phosphorylation in the TCA cycle gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02745 PAJ_RS02750 PAJ_0501 PAJ_RS02750 612862 614433 + cytochrome bd-I ubiquinol oxidase subunit I part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02750 PAJ_RS02755 PAJ_0502 PAJ_RS02755 614445 615584 + cytochrome d ubiquinol oxidase subunit II gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02755 PAJ_RS02760 PAJ_0503 PAJ_RS02760 615599 615712 + cyd operon protein YbgT gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02760 PAJ_RS02765 PAJ_RS02765 PAJ_RS02765 615712 616005 + cyd operon protein YbgE gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02765 PAJ_RS02770 PAJ_0504 PAJ_RS02770 616187 616591 + acyl-CoA thioesterase catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02770 PAJ_RS02775 PAJ_0505 PAJ_RS02775 616588 617274 + Tol-Pal system subunit TolQ membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02775 PAJ_RS02780 PAJ_0506 PAJ_RS02780 617288 617716 + colicin transporter membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02780 PAJ_RS02785 PAJ_0507 PAJ_RS02785 617743 619038 + cell envelope integrity/translocation protein TolA gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02785 PAJ_RS02790 PAJ_0508 tolB tolB 619154 620449 + translocation protein TolB forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02790 PAJ_RS02795 PAJ_0509 PAJ_RS02795 620502 621026 + hypothetical protein gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02795 PAJ_RS02800 PAJ_0510 PAJ_RS02800 621036 621842 + cell division protein CpoB periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02800 PAJ_RS02805 PAJ_t0012 PAJ_RS02805 622009 622084 + tRNA-Lys tRNA gene560 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02805 PAJ_RS02810 PAJ_t0013 PAJ_RS02810 622144 622219 + tRNA-Lys tRNA gene561 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02810 PAJ_RS02815 PAJ_t0014 PAJ_RS02815 622274 622349 + tRNA-Lys tRNA gene562 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02815 PAJ_RS02820 PAJ_RS02820 PAJ_RS02820 622394 622525 + RtT sRNA rtT sRNA%2C processed from tyrT transcript ncRNA gene563 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02820 PAJ_RS02825 PAJ_RS02825 PAJ_RS02825 622557 622687 + RtT sRNA rtT sRNA%2C processed from tyrT transcript ncRNA gene564 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02825 PAJ_RS02830 PAJ_RS02830 PAJ_RS02830 622732 622862 + RtT sRNA rtT sRNA%2C processed from tyrT transcript ncRNA gene565 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02830 PAJ_RS02835 PAJ_0511 PAJ_RS02835 623026 624864 - methyl-accepting chemotaxis protein III Trg gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02835 PAJ_RS02840 PAJ_0512 PAJ_RS02840 624993 626435 - ADA regulatory protein Ada gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02840 PAJ_RS02845 PAJ_0513 PAJ_RS02845 626594 627100 + methylated-DNA--protein-cysteine methyltransferase Ogt gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02845 PAJ_RS02850 PAJ_0514 PAJ_RS02850 627234 628295 + quinolinate synthetase 3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02850 PAJ_RS02855 PAJ_0515 PAJ_RS02855 628321 629043 + nicotinamide riboside transporter PnuC involved in nicotinamide riboside transport gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02855 PAJ_RS02860 PAJ_0516 PAJ_RS02860 629037 629993 - zinc transporter ZitB involved in zinc efflux across the cytoplasmic membrane gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02860 PAJ_RS02865 PAJ_0517 PAJ_RS02865 629971 633045 - virulence sensor protein BvgS gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02865 PAJ_RS02870 PAJ_0518 PAJ_RS02870 633027 633608 - DNA-binding response regulator gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02870 PAJ_RS02875 PAJ_0519 PAJ_RS02875 633710 634063 - homeobox protein YbgS gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02875 PAJ_RS02880 PAJ_0520 PAJ_RS02880 634357 635409 + 3-deoxy-7-phosphoheptulonate synthase catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02880 PAJ_RS02885 PAJ_0521 gpmA gpmA 635469 636221 - phosphoglyceromutase 2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02885 PAJ_RS02890 PAJ_0522 galM galM 636371 637405 - galactose mutarotase mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02890 PAJ_RS02895 PAJ_0523 PAJ_RS02895 637399 638547 - galactokinase catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02895 PAJ_RS02900 PAJ_0524 PAJ_RS02900 638544 639590 - galactose-1-phosphate uridylyltransferase catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02900 PAJ_RS02905 PAJ_0525 PAJ_RS02905 639811 641283 - molybdate ABC transporter ATP-binding protein ModF contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02905 PAJ_RS02910 PAJ_0526 PAJ_RS02910 641359 642141 - molybdenum-dependent transcriptional regulator represses the modABCD operon and activates the moaABCD and napFDAGHBC operons gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02910 PAJ_RS02915 PAJ_0528 modA modA 642575 643348 + molybdate ABC transporter substrate-binding protein with ModCB is involved in the high-affinity transport of molybdate gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02915 PAJ_RS02920 PAJ_0529 modB modB 643345 644040 + molybdate ABC transporter permease part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02920 PAJ_RS02925 PAJ_0530 modC modC 644034 645092 + molybdenum ABC transporter ATP-binding protein Part of the ABC transporter complex modABC involved in molybdenum import gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02925 PAJ_RS02930 PAJ_0531 PAJ_RS02930 645127 645945 - pyridoxal phosphatase gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02930 PAJ_RS02935 PAJ_0532 PAJ_RS02935 646101 647102 + 6-phosphogluconolactonase catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02935 PAJ_RS02940 PAJ_0533 PAJ_RS02940 647164 647640 - kinase inhibitor YbhB%3B similar to rat and human kinase inhibitory proteins gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02940 PAJ_RS02945 PAJ_0534 PAJ_RS02945 647715 649007 - adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7%2C8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02945 PAJ_RS02950 PAJ_0535 PAJ_RS02950 649093 650124 + biotin synthase catalyzes the formation of biotin from dethiobiotin gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02950 PAJ_RS02955 PAJ_0536 PAJ_RS02955 650124 651275 + 8-amino-7-oxononanoate synthase catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02955 PAJ_RS02960 PAJ_0537 PAJ_RS02960 651259 652014 + malonyl-[acyl-carrier protein] O-methyltransferase BioC methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02960 PAJ_RS02965 PAJ_0538 bioD bioD 652011 652697 + dethiobiotin synthase DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02965 PAJ_RS02970 PAJ_0539 PAJ_RS02970 652683 653405 - ABC transporter ATP-binding protein gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02970 PAJ_RS02975 PAJ_0540 PAJ_RS02975 654282 656303 + excinuclease ABC subunit B The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02975 PAJ_RS02980 PAJ_0541 PAJ_RS02980 656305 657210 - hypothetical protein gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02980 PAJ_RS02985 PAJ_RS02985 moaA moaA 657535 658521 + cyclic pyranopterin phosphate synthase MoaA together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02985 PAJ_RS02990 PAJ_0543 PAJ_RS02990 658536 659051 + molybdenum cofactor biosynthesis protein gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02990 PAJ_RS02995 PAJ_0544 moaC moaC 659054 659539 + cyclic pyranopterin monophosphate synthase accessory protein MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS02995 PAJ_RS03000 PAJ_0545 moaD moaD 659532 659777 + molybdopterin synthase sulfur carrier subunit catalyzes the conversion of molybdopterin precursor Z into molybdopterin gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03000 PAJ_RS03005 PAJ_0546 moaE moaE 659778 660230 + molybdopterin guanine dinucleotide biosynthesis protein MoaE catalyzes the conversion of molybdopterin precursor Z into molybdopterin gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03005 PAJ_RS03010 PAJ_0547 PAJ_RS03010 660454 661548 + hypothetical protein gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03010 PAJ_RS03015 PAJ_0548 PAJ_RS03015 661644 662351 + membrane protein gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03015 PAJ_RS03020 PAJ_0549 PAJ_RS03020 662393 663358 - membrane protein gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03020 PAJ_RS03025 PAJ_0550 PAJ_RS03025 663358 664602 - cardiolipin synthase B gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03025 PAJ_RS03030 PAJ_0551 PAJ_RS03030 664599 665360 - hypothetical protein gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03030 PAJ_RS03035 PAJ_0552 PAJ_RS03035 665538 665930 + membrane protein gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03035 PAJ_RS03040 PAJ_0553 PAJ_RS03040 666154 667503 + ATP-dependent RNA helicase RhlE this helicase is not essential cell growth gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03040 PAJ_RS03045 PAJ_0554 PAJ_RS03045 667506 668492 + tRNA dihydrouridine synthase DusC gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03045 PAJ_RS03050 PAJ_0555 PAJ_RS03050 668522 669439 - hypothetical protein gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03050 PAJ_RS03055 PAJ_0557 PAJ_RS03055 669454 671058 - anion permease gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03055 PAJ_RS03060 PAJ_0558 PAJ_RS03060 671222 672244 + magnesium transporter CorA gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03060 PAJ_RS03065 PAJ_0559 PAJ_RS03065 672339 673481 - transpeptidase gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03065 PAJ_RS03070 PAJ_0560 PAJ_RS03070 673678 675492 - glucoamylase gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03070 PAJ_RS03075 PAJ_0561 PAJ_RS03075 675649 676422 + oxidoreductase gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03075 PAJ_RS03080 PAJ_0562 PAJ_RS03080 676416 676997 - membrane protein gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03080 PAJ_RS03085 PAJ_0563 PAJ_RS03085 677205 677792 + membrane protein gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03085 PAJ_RS03090 PAJ_0564 pbpG pbpG 677968 678915 + D-alanyl-D-alanine endopeptidase specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7 gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03090 PAJ_RS03095 PAJ_0565 PAJ_RS03095 679051 681501 + mechanosensitive ion channel protein gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03095 PAJ_RS03100 PAJ_0566 PAJ_RS03100 681564 683267 - D-lactate dehydrogenase component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03100 PAJ_RS03105 PAJ_0567 PAJ_RS03105 683419 685716 + beta-glucosidase catalyzes the hydrolysis of terminal beta-D-glucosyl residues gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03105 PAJ_RS03110 PAJ_RS03110 PAJ_RS03110 685912 687017 + Suppressor of fused protein (SUFU) frameshifted gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03110 PAJ_RS03115 PAJ_0570 PAJ_RS03115 687196 689091 + chemotaxis protein gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03115 PAJ_RS03120 PAJ_0571 PAJ_RS03120 689240 689773 + isopentenyl-diphosphate Delta-isomerase gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03120 PAJ_RS03125 PAJ_0572 PAJ_RS03125 689955 690866 + osmoprotectant uptake system substrate-binding protein gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03125 PAJ_RS03130 PAJ_0573 PAJ_RS03130 690870 692051 + osmoprotectant uptake system permease gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03130 PAJ_RS03135 PAJ_0574 PAJ_RS03135 692038 692985 + ATP-binding protein gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03135 PAJ_RS03140 PAJ_0575 PAJ_RS03140 692973 693704 + osmoprotectant uptake system permease gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03140 PAJ_RS03145 PAJ_0576 PAJ_RS03145 693877 694611 - helix-turn-helix-type transcriptional regulator gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03145 PAJ_RS03150 PAJ_0577 PAJ_RS03150 694761 695324 + DNA-binding protein gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03150 PAJ_RS03155 PAJ_0578 PAJ_RS03155 695321 695851 + acetyltransferase gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03155 PAJ_RS03160 PAJ_0579 dinG dinG 696053 698215 + ATP-dependent DNA helicase DinG helicase involved in DNA repair and perhaps also replication gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03160 PAJ_RS03165 PAJ_0580 PAJ_RS03165 698243 699211 + DNA-binding protein YbiB gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03165 PAJ_RS03170 PAJ_0581 PAJ_RS03170 699208 700371 - peptidase M20 gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03170 PAJ_RS03175 PAJ_0582 PAJ_RS03175 700514 701569 - GntR family transcriptional regulator gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03175 PAJ_RS03180 PAJ_0583 PAJ_RS03180 701839 703035 + mandelate racemase gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03180 PAJ_RS03185 PAJ_0584 PAJ_RS03185 703108 704421 + glucarate transporter gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03185 PAJ_RS03190 PAJ_0585 PAJ_RS03190 704520 706202 - urocanate hydratase catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03190 PAJ_RS03195 PAJ_0586 PAJ_RS03195 706213 707769 - histidine ammonia-lyase catalyzes the degradation of histidine to urocanate and ammmonia gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03195 PAJ_RS03200 PAJ_0587 PAJ_RS03200 708073 708828 + histidine utilization repressor gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03200 PAJ_RS03205 PAJ_0588 PAJ_RS03205 708812 709357 - hypothetical protein gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03205 PAJ_RS03210 PAJ_0589 PAJ_RS03210 709354 710709 - formimidoylglutamate deiminase catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03210 PAJ_RS03215 PAJ_0590 PAJ_RS03215 710794 712011 + imidazolonepropionase catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03215 PAJ_RS03220 PAJ_0591 PAJ_RS03220 712008 712799 + N-formylglutamate deformylase gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03220 PAJ_RS03225 PAJ_0592 PAJ_RS03225 713462 714310 + ABC transporter substrate-binding protein gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03225 PAJ_RS03230 PAJ_0593 PAJ_RS03230 714323 715042 + ABC transporter permease gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03230 PAJ_RS03235 PAJ_0594 PAJ_RS03235 715054 715785 + ABC transporter permease gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03235 PAJ_RS03240 PAJ_0595 PAJ_RS03240 715787 716578 + histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03240 PAJ_RS03245 PAJ_0596 PAJ_RS03245 716578 718077 + histidine ammonia-lyase HutH gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03245 PAJ_RS03250 PAJ_0597 PAJ_RS03250 718081 718710 - Asp/Glu/hydantoin racemase gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03250 PAJ_RS03255 PAJ_0598 PAJ_RS03255 719029 720135 + NAD(P)H-binding protein gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03255 PAJ_RS03260 PAJ_0599 PAJ_RS03260 720373 721296 + 23S rRNA (adenine(1618)-N(6))-methyltransferase gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03260 PAJ_RS03265 PAJ_0600 glnQ glnQ 721332 722054 - glutamine ABC transporter ATP-binding protein similar to ATP-binding component of ABC transporters gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03265 PAJ_RS03270 PAJ_0602 glnP glnP 722051 722710 - glutamine ABC transporter permease GlnP similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03270 PAJ_RS03275 PAJ_0603 glnH glnH 722787 723533 - glutamine ABC transporter substrate-binding protein GlnH similar to periplasmic-binding component of ABC transporters gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03275 PAJ_RS03280 PAJ_0604 PAJ_RS03280 723867 724370 - DNA starvation/stationary phase protection protein binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03280 PAJ_RS03285 PAJ_0605 PAJ_RS03285 724693 725604 - threonine/homoserine exporter RhtA gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03285 PAJ_RS03290 PAJ_0606 ompX ompX 725971 726483 + outer membrane protein X OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03290 PAJ_RS03295 PAJ_RS03295 PAJ_RS03295 726925 727113 - hypothetical protein gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03295 PAJ_RS03300 PAJ_0607 PAJ_RS03300 727334 727792 + transcriptional regulator MntR gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03300 PAJ_RS03305 PAJ_0608 PAJ_RS03305 727817 728926 + membrane protein gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03305 PAJ_RS03310 PAJ_0609 PAJ_RS03310 729069 730214 + multidrug export protein EmrA gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03310 PAJ_RS03315 PAJ_0610 PAJ_RS03315 730211 731779 + EmrB/QacA family drug resistance transporter gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03315 PAJ_RS03320 PAJ_0611 PAJ_RS03320 731781 733307 + RND transporter gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03320 PAJ_RS03325 PAJ_0612 PAJ_RS03325 734006 734407 + DNA-binding protein gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03325 PAJ_RS03330 PAJ_0613 PAJ_RS03330 734731 736323 + ABC-F family ATPase gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03330 PAJ_RS03335 PAJ_0614 PAJ_RS03335 736469 737227 - molybdopterin-synthase adenylyltransferase MoeB gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03335 PAJ_RS03340 PAJ_0615 PAJ_RS03340 737228 738463 - molybdopterin molybdenumtransferase MoeA is involved in the formation of active molybdenum cofactor and the chelation of molybdenum gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03340 PAJ_RS03345 PAJ_0616 PAJ_RS03345 738682 739641 + isoaspartyl peptidase gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03345 PAJ_RS03350 PAJ_0617 PAJ_RS03350 739664 741514 + glutathione ABC transporter ATP-binding protein with GsiBCD is involved in glutathione import%3B GsiA contains 2 ATP-binding domains gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03350 PAJ_RS03355 PAJ_0618 PAJ_RS03355 741566 743101 + glutathione ABC transporter substrate-binding protein GsiB with GsiACD is involved in the transport of glutathione into the cell gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03355 PAJ_RS03360 PAJ_0619 PAJ_RS03360 743245 744171 + glutathione ABC transporter permease GsiC with GsiABD is involved in the transport of glutathione into the cell gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03360 PAJ_RS03365 PAJ_0620 PAJ_RS03365 744171 745076 + glutathione ABC transporter permease GsiD with GsiABD is involved in the transport of glutathione into the cell gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03365 PAJ_RS03370 PAJ_0621 PAJ_RS03370 745073 745522 + hypothetical protein gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03370 PAJ_RS03375 PAJ_0622 rimO rimO 745519 746847 - ribosomal protein S12 methylthiotransferase catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03375 PAJ_RS03380 PAJ_0623 PAJ_RS03380 747224 747859 + carbonic anhydrase gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03380 PAJ_RS03385 PAJ_0624 PAJ_RS03385 748047 749183 + hypothetical protein gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03385 PAJ_RS03390 PAJ_0625 PAJ_RS03390 749185 749841 - hydrolase gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03390 PAJ_RS03395 PAJ_0626 PAJ_RS03395 750114 751316 + D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03395 PAJ_RS03400 PAJ_0627 PAJ_RS03400 751346 751951 - undecaprenyl-diphosphatase gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03400 PAJ_RS03405 PAJ_0628 PAJ_RS03405 752321 754009 - transporter gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03405 PAJ_RS03410 PAJ_0629 PAJ_RS03410 754263 754628 + membrane protein gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03410 PAJ_RS03415 PAJ_0630 PAJ_RS03415 754761 755024 - glutaredoxin%2C GrxA family functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03415 PAJ_RS03420 PAJ_0631 PAJ_RS03420 755271 755528 + hypothetical protein gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03420 PAJ_RS03425 PAJ_0632 PAJ_RS03425 755540 756262 + NADPH-dependent oxidoreductase NADPH-dependent%3B oxygen-insensitive%3B catalyzes the reduction of nitroaromatic compounds gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03425 PAJ_RS03430 PAJ_0633 PAJ_RS03430 756285 757187 + ribosomal protein S6 modification protein responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03430 PAJ_RS03435 PAJ_0634 PAJ_RS03435 757274 757753 + hypothetical protein gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03435 PAJ_RS03440 PAJ_0635 PAJ_RS03440 758247 759356 + spermidine/putrescine ABC transporter substrate-binding protein PotF gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03440 PAJ_RS03445 PAJ_0636 potG potG 759471 760604 + putrescine/spermidine ABC transporter ATP-binding protein part of the PotFGHI ATP-dependent putrescine transporter gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03445 PAJ_RS03450 PAJ_0637 PAJ_RS03450 760614 761576 + putrescine ABC transporter permease gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03450 PAJ_RS03455 PAJ_0638 PAJ_RS03455 761573 762418 + putrescine ABC transporter permease PotI gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03455 PAJ_RS03460 PAJ_0639 PAJ_RS03460 762493 762960 + membrane protein gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03460 PAJ_RS03465 PAJ_0640 rumB rumB 763009 764151 + 23S rRNA (uracil(747)-C(5))-methyltransferase RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03465 PAJ_RS03470 PAJ_0641 PAJ_RS03470 764214 764945 - arginine ABC transporter substrate-binding protein with ArtPMQI is involved in arginine transport gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03470 PAJ_RS03475 PAJ_0642 artM artM 765068 765736 - arginine transporter permease subunit ArtM with ArtPQJI acts to transport arginine across the inner membrane gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03475 PAJ_RS03480 PAJ_0644 PAJ_RS03480 765736 766453 - arginine transporter permease subunit ArtQ with ArtPMJI transports arginine across the inner membrane%3B frameshifted gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03480 PAJ_RS03485 PAJ_0645 PAJ_RS03485 766460 767191 - arginine ABC transporter substrate-binding protein with ArtPMQI is involved in arginine transport gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03485 PAJ_RS03490 PAJ_0646 PAJ_RS03490 767207 767956 - arginine ABC transporter ATP-binding protein ArtP gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03490 PAJ_RS03495 PAJ_0647 PAJ_RS03495 768158 768697 - lipoprotein induced during stationary phase and by acivicin (a glutamine analog)%3B regulated by Lrp and RpoS gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03495 PAJ_RS03500 PAJ_0648 PAJ_RS03500 768803 769123 + hypothetical protein gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03500 PAJ_RS03505 PAJ_0649 PAJ_RS03505 769120 769944 + N-acetylmuramoyl-L-alanine amidase catalyzes the cleavage of the bond between muamic acid and l-alanine gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03505 PAJ_RS03510 PAJ_0650 PAJ_RS03510 769968 771083 - low-specificity L-threonine aldolase low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03510 PAJ_RS03515 PAJ_0651 PAJ_RS03515 771093 772814 - pyruvate dehydrogenase catalyzes the formation of acetate from pyruvate gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03515 PAJ_RS03520 PAJ_0653 PAJ_RS03520 772938 773837 - membrane protein gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03520 PAJ_RS03525 PAJ_0654 PAJ_RS03525 773974 775623 + hypothetical protein gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03525 PAJ_RS03530 PAJ_0655 PAJ_RS03530 775695 775919 - cold shock domain protein CspD inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03530 PAJ_RS03535 PAJ_0656 clpS clpS 776236 776556 + ATP-dependent Clp protease adaptor ClpS involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03535 PAJ_RS03540 PAJ_0657 clpA clpA 776610 778886 + ATP-dependent Clp protease ATP-binding subunit ClpA ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03540 PAJ_RS03545 PAJ_0658 PAJ_RS03545 778979 779198 - translation initiation factor IF-1 frameshifted gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03545 PAJ_RS03550 PAJ_0659 aat aat 779543 780235 - leucyl/phenylalanyl-tRNA--protein transferase leucyltransferase%3B phenylalanyltransferse%3B functions in the N-end rule pathway%3B transfers Leu%2C Phe%2C Met%2C from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03550 PAJ_RS03555 PAJ_0660 PAJ_RS03555 780267 781997 - thiol reductant ABC exporter subunit CydC in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03555 PAJ_RS03560 PAJ_0661 PAJ_RS03560 781997 783766 - thiol reductant ABC exporter subunit CydD in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03560 PAJ_RS03565 PAJ_0662 PAJ_RS03565 783903 784868 - thioredoxin-disulfide reductase catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03565 PAJ_RS03570 PAJ_0663 PAJ_RS03570 785394 785888 + leucine-responsive transcriptional regulator mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03570 PAJ_RS03575 PAJ_0664 PAJ_RS03575 786007 789456 + cell division protein FtsK gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03575 PAJ_RS03580 PAJ_0665 lolA lolA 789639 790250 + outer membrane lipoprotein carrier protein LolA participates with LolB in the incorporation of lipoprotein into the outer membrane gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03580 PAJ_RS03585 PAJ_0666 PAJ_RS03585 790258 791601 + recombination factor protein RarA gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03585 PAJ_RS03590 PAJ_0667 PAJ_RS03590 791692 792985 + serine--tRNA ligase frameshifted gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03590 PAJ_RS03595 PAJ_0668 PAJ_RS03595 793309 794463 + MFS transporter gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03595 PAJ_RS03600 PAJ_0669 pflA pflA 794565 795305 - pyruvate formate lyase-activating protein activates pyruvate formate-lyase 1 under anaerobic conditions gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03600 PAJ_RS03605 PAJ_0670 PAJ_RS03605 795473 797755 - formate acetyltransferase formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03605 PAJ_RS03610 PAJ_0671 PAJ_RS03610 797828 798688 - formate transporter FocA gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03610 PAJ_RS03615 PAJ_0672 PAJ_RS03615 799067 800830 - hypothetical protein gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03615 PAJ_RS03620 PAJ_0673 PAJ_RS03620 801140 802225 + phosphoserine transaminase catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03620 PAJ_RS03625 PAJ_0674 PAJ_RS03625 802307 803593 + 3-phosphoshikimate 1-carboxyvinyltransferase gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03625 PAJ_RS03630 PAJ_0675 cmk cmk 803785 804465 + cytidylate kinase Catalyzes the formation of (d)CDP from ATP and (d)CMP gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03630 PAJ_RS03635 PAJ_0676 rpsA rpsA 804588 806261 + 30S ribosomal protein S1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03635 PAJ_RS03640 PAJ_0677 ihfB ihfB 806344 806628 + integration host factor subunit beta This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03640 PAJ_RS03645 PAJ_0678 PAJ_RS03645 806831 809086 + DNA internalization-related competence protein ComEC/Rec2 gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03645 PAJ_RS03650 PAJ_0679 PAJ_RS03650 809121 810869 + lipid ABC transporter permease/ATP-binding protein involved in the transport of lipid A across the inner membrane gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03650 PAJ_RS03655 PAJ_0680 lpxK lpxK 810866 811867 + tetraacyldisaccharide 4'-kinase transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03655 PAJ_RS03660 PAJ_0681 PAJ_RS03660 811892 813109 + hypothetical protein gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03660 PAJ_RS03665 PAJ_0682 PAJ_RS03665 813195 813377 + hypothetical protein gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03665 PAJ_RS03670 PAJ_0683 PAJ_RS03670 813374 814123 + 3-deoxy-manno-octulosonate cytidylyltransferase CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03670 PAJ_RS03675 PAJ_0684 PAJ_RS03675 814221 814997 - hypothetical protein gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03675 PAJ_RS03680 PAJ_0685 PAJ_RS03680 815123 815908 + S-adenosyl-L-methionine-dependent methyltransferase gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03680 PAJ_RS03685 PAJ_0686 PAJ_RS03685 815905 817227 + chromosome partition protein MukF acts with MukB and MukE to condense the chromosome and allow for segregation during cell division gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03685 PAJ_RS03690 PAJ_0687 PAJ_RS03690 817208 817933 + condensin subunit E acts with MukB and MukF to condense the chromosome and allow for segregation during cell division gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03690 PAJ_RS03695 PAJ_0688 mukB mukB 817930 822396 + cell division protein MukB SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03695 PAJ_RS03700 PAJ_0689 PAJ_RS03700 822566 824383 + L%2CD-transpeptidase gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03700 PAJ_RS03705 PAJ_0690 PAJ_RS03705 824569 825117 + hypothetical protein gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03705 PAJ_RS03710 PAJ_0691 PAJ_RS03710 825157 825786 + hypothetical protein gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03710 PAJ_RS03715 PAJ_0692 PAJ_RS03715 825828 827018 - aromatic amino acid aminotransferase gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03715 PAJ_RS03720 PAJ_0693 PAJ_RS03720 827229 828344 - porin OmpC gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03720 PAJ_RS03725 PAJ_0694 PAJ_RS03725 828645 830045 - asparagine--tRNA ligase gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03725 PAJ_RS03730 PAJ_0695 PAJ_RS03730 830202 831407 - nicotinate phosphoribosyltransferase catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03730 PAJ_RS03735 PAJ_0696 pepN pepN 831692 834307 + aminopeptidase N gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03735 PAJ_RS03740 PAJ_0697 ssuB ssuB 834340 835128 - aliphatic sulfonates ABC transporter ATP-binding protein part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic substrate-binding subunit%2C SsuB the ATP-binding subunit and SsuC the permease gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03740 PAJ_RS03745 PAJ_0698 ssuC ssuC 835125 835916 - sulfonate ABC transporter part of the ABC type transport system for alkanesulfonate SsuABC%3B SsuB the ATP-binding subunit and SsuC the permease gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03745 PAJ_RS03750 PAJ_0699 PAJ_RS03750 835927 837075 - alkanesulfonate monooxygenase catalyzes the release of sulfite from alkanesulfonates gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03750 PAJ_RS03755 PAJ_0700 PAJ_RS03755 837086 838039 - aliphatic sulfonate ABC transporter substrate-binding protein gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03755 PAJ_RS03760 PAJ_0701 PAJ_RS03760 838050 838601 - NAD(P)H-dependent FMN reductase gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03760 PAJ_RS03765 PAJ_0702 PAJ_RS03765 839355 840335 + glycosyl transferase gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03765 PAJ_RS03770 PAJ_0703 PAJ_RS03770 840419 841720 + O-antigen transporter RfbX gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03770 PAJ_RS03775 PAJ_0704 PAJ_RS03775 841855 842865 + dihydroorotate dehydrogenase 2 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03775 PAJ_RS03780 PAJ_0705 PAJ_RS03780 843007 843549 + cell division protein ZapC gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03780 PAJ_RS03785 PAJ_0706 PAJ_RS03785 843551 844660 - hypothetical protein gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03785 PAJ_RS03790 PAJ_0707 rlmL rlmL 844770 846884 + 23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))-methyltransferase catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03790 PAJ_RS03795 PAJ_0708 PAJ_RS03795 846890 848809 + ABC transporter ATPase Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03795 PAJ_RS03800 PAJ_0709 PAJ_RS03800 848826 850094 + paraquat-inducible protein A gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03800 PAJ_RS03805 PAJ_0710 PAJ_RS03805 850081 851724 + paraquat-inducible protein B gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03805 PAJ_RS03810 PAJ_0711 PAJ_RS03810 851721 852305 + hypothetical protein gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03810 PAJ_RS03815 PAJ_0713 PAJ_RS03815 852797 853315 - beta-hydroxydecanoyl-ACP dehydratase catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03815 PAJ_RS03820 PAJ_0714 PAJ_RS03820 853384 855210 - ATP-dependent protease gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03820 PAJ_RS03825 PAJ_0715 PAJ_RS03825 855234 855776 + macrodomain Ter protein gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03825 PAJ_RS03830 PAJ_0716 PAJ_RS03830 855887 856960 - porin OmpA OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03830 PAJ_RS03835 PAJ_0717 PAJ_RS03835 857312 857803 - cell division protein gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03835 PAJ_RS03840 PAJ_0718 PAJ_RS03840 858014 858640 + Crp/Fnr family transcriptional regulator gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03840 PAJ_RS03845 PAJ_0719 PAJ_RS03845 858637 860784 - membrane protein gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03845 PAJ_RS03850 PAJ_0720 PAJ_RS03850 860765 861208 - hypothetical protein gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03850 PAJ_RS03855 PAJ_0721 helD helD 861329 863383 + DNA helicase IV catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03855 PAJ_RS03860 PAJ_0722 mgsA mgsA 863385 863843 - methylglyoxal synthase catalyzes the formation of methylglyoxal from glycerone phosphate gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03860 PAJ_RS03865 PAJ_0723 PAJ_RS03865 863912 864550 - hypothetical protein gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03865 PAJ_RS03870 PAJ_0724 PAJ_RS03870 864718 865131 + hypothetical protein gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03870 PAJ_RS03875 PAJ_0725 PAJ_RS03875 865165 865482 - heat-shock protein HspQ gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03875 PAJ_RS03880 PAJ_0726 PAJ_RS03880 865542 866732 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase SAM-dependent%3Bcatalyzes the methylation of cytosine at position 1962 of the 23S rRNA gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03880 PAJ_RS03885 PAJ_0727 PAJ_RS03885 866815 867093 + acylphosphatase catalyzes the hydrolysis of acylphosphate gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03885 PAJ_RS03890 PAJ_0728 PAJ_RS03890 867094 867420 - sulfur transfer protein TusE transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03890 PAJ_RS03895 PAJ_0729 PAJ_RS03895 867524 868180 - BAX inhibitor protein binds to the HflBKC complex which modulates FtsH activity gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03895 PAJ_RS03900 PAJ_t0015 PAJ_RS03900 868402 868489 + tRNA-Ser tRNA gene779 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03900 PAJ_RS03905 PAJ_t0016 PAJ_RS03905 868562 868649 + tRNA-Ser tRNA gene780 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03905 PAJ_RS03910 PAJ_0730 PAJ_RS03910 868895 870550 + bifunctional glucose-1-phosphatase/inositol phosphatase gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03910 PAJ_RS03915 PAJ_0731 PAJ_RS03915 870610 871992 - succinate-semialdehyde dehydrogenase in Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03915 PAJ_RS03920 PAJ_0732 PAJ_RS03920 872048 872278 - hypothetical protein gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03920 PAJ_RS03925 PAJ_0733 PAJ_RS03925 872299 872898 - NAD(P)H:quinone oxidoreductase catalyzes the transfer of electrons from NADH to ubiquinone gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03925 PAJ_RS03930 PAJ_0734 PAJ_RS03930 873471 874385 + membrane protein gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03930 PAJ_RS03935 PAJ_0735 PAJ_RS03935 874555 875190 + transcriptional regulator gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03935 PAJ_RS03940 PAJ_0736 PAJ_RS03940 875238 876212 + hydrolase gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03940 PAJ_RS03945 PAJ_RS03945 PAJ_RS03945 876255 877648 - amino acid permease frameshifted gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03945 PAJ_RS03950 PAJ_0738 PAJ_RS03950 877933 878628 + extensin gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03950 PAJ_RS03955 PAJ_RS03955 PAJ_RS03955 878989 879213 + hypothetical protein gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03955 PAJ_RS03960 PAJ_0739 PAJ_RS03960 879551 880273 + transcriptional regulator gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03960 PAJ_RS03965 PAJ_0740 PAJ_RS03965 880396 881007 + autoinducer synthase gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03965 PAJ_RS03970 PAJ_0741 PAJ_RS03970 881041 881265 - hypothetical protein gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03970 PAJ_RS03975 PAJ_0742 sirA sirA 881695 882354 + DNA-binding response regulator in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03975 PAJ_RS03980 PAJ_0743 uvrC uvrC 882347 884179 + excinuclease ABC subunit C The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03980 PAJ_RS03985 PAJ_0744 PAJ_RS03985 884248 884796 + CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03985 PAJ_RS03990 PAJ_t0017 PAJ_RS03990 884987 885062 + tRNA-Gly tRNA gene797 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03990 PAJ_RS03995 PAJ_t0018 PAJ_RS03995 885103 885176 + tRNA-Cys tRNA gene798 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS03995 PAJ_RS04000 PAJ_t0019 PAJ_RS04000 885187 885273 + tRNA-Leu tRNA gene799 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04000 PAJ_RS04005 PAJ_0745 PAJ_RS04005 885385 886398 - integrase gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04005 PAJ_RS04010 PAJ_RS04010 PAJ_RS04010 886671 887015 - hypothetical protein gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04010 PAJ_RS04015 PAJ_0746 PAJ_RS04015 887019 887774 - hypothetical protein gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04015 PAJ_RS04020 PAJ_0747 PAJ_RS04020 887771 888499 - hypothetical protein gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04020 PAJ_RS04025 PAJ_RS04025 PAJ_RS04025 888746 889054 - hypothetical protein gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04025 PAJ_RS04030 PAJ_RS04030 PAJ_RS04030 889477 889636 - cruciferin frameshifted gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04030 PAJ_RS04035 PAJ_0749 PAJ_RS04035 890080 890772 - transcriptional regulator gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04035 PAJ_RS04040 PAJ_RS04040 PAJ_RS04040 890870 891106 + transcriptional regulator gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04040 PAJ_RS04045 PAJ_0750 PAJ_RS04045 891131 891667 + hypothetical protein gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04045 PAJ_RS04050 PAJ_0751 PAJ_RS04050 892134 893012 + transcriptional regulator gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04050 PAJ_RS04055 PAJ_RS04055 PAJ_RS04055 893022 893453 + hypothetical protein gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04055 PAJ_RS04060 PAJ_0752 PAJ_RS04060 893569 894411 + DNA-binding protein gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04060 PAJ_RS04065 PAJ_RS04065 PAJ_RS04065 894521 894814 + hypothetical protein gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04065 PAJ_RS04070 PAJ_0753 PAJ_RS04070 896168 896899 + antirepressor gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04070 PAJ_RS04075 PAJ_0754 PAJ_RS04075 896896 897909 + hypothetical protein gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04075 PAJ_RS04080 PAJ_RS04080 PAJ_RS04080 897930 898331 + antitermination protein gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04080 PAJ_RS04085 PAJ_RS04085 PAJ_RS04085 898594 898866 + hypothetical protein gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04085 PAJ_RS04090 PAJ_RS04090 PAJ_RS04090 899087 899437 + holin gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04090 PAJ_RS04095 PAJ_RS04095 PAJ_RS04095 899421 899846 + lysozyme gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04095 PAJ_RS04100 PAJ_0755 PAJ_RS04100 899843 900295 + Rz lytic protein gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04100 PAJ_RS04105 PAJ_0756 PAJ_RS04105 900706 901197 + hypothetical protein gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04105 PAJ_RS04110 PAJ_0757 PAJ_RS04110 901194 901742 + transcriptional regulator gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04110 PAJ_RS04115 PAJ_0758 PAJ_RS04115 901733 902182 + hypothetical protein gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04115 PAJ_RS04120 PAJ_RS04120 PAJ_RS04120 902606 902821 + hypothetical protein gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04120 PAJ_RS04125 PAJ_RS04125 PAJ_RS04125 903091 903294 - hypothetical protein gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04125 PAJ_RS04130 PAJ_0759 PAJ_RS04130 903579 904052 + terminase gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04130 PAJ_RS04135 PAJ_0760 PAJ_RS04135 904056 905786 + terminase gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04135 PAJ_RS04140 PAJ_0761 PAJ_RS04140 905786 907090 + portal protein gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04140 PAJ_RS04145 PAJ_0762 PAJ_RS04145 907102 907950 + peptidase S14 gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04145 PAJ_RS04150 PAJ_0763 PAJ_RS04150 907960 909174 + phage capsid protein gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04150 PAJ_RS04155 PAJ_RS04155 PAJ_RS04155 909219 909545 + phage protein gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04155 PAJ_RS04160 PAJ_RS04160 PAJ_RS04160 909542 909877 + head-tail adaptor protein gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04160 PAJ_RS04165 PAJ_0764 PAJ_RS04165 909870 910253 + hypothetical protein gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04165 PAJ_RS04170 PAJ_RS04170 PAJ_RS04170 910256 910657 + hypothetical protein gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04170 PAJ_RS04175 PAJ_0765 PAJ_RS04175 910690 911142 + major tail shaft subunit gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04175 PAJ_RS04180 PAJ_RS04180 PAJ_RS04180 911198 911563 + phage tail protein gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04180 PAJ_RS04185 PAJ_0766 PAJ_RS04185 911814 915186 + phage tail protein frameshifted gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04185 PAJ_RS04190 PAJ_RS04190 PAJ_RS04190 915189 915530 + tail protein gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04190 PAJ_RS04195 PAJ_0767 PAJ_RS04195 915582 916319 + hypothetical protein gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04195 PAJ_RS04200 PAJ_0768 PAJ_RS04200 916322 917041 + peptidase P60 gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04200 PAJ_RS04205 PAJ_0769 PAJ_RS04205 917034 917657 + tail protein gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04205 PAJ_RS04210 PAJ_0770 PAJ_RS04210 917710 920916 + hypothetical protein gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04210 PAJ_RS04215 PAJ_RS04215 PAJ_RS04215 920916 921215 + hypothetical protein gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04215 PAJ_RS04220 PAJ_RS04220 PAJ_RS04220 921977 922204 + cor protein gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04220 PAJ_RS04225 PAJ_0772 PAJ_RS04225 922269 923546 + hypothetical protein gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04225 PAJ_RS04230 PAJ_RS04230 PAJ_RS04230 923756 923995 + DNA polymerase V gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04230 PAJ_RS04235 PAJ_0773 PAJ_RS04235 923995 925257 + DNA polymerase V subunit UmuC binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04235 PAJ_RS04240 PAJ_0774 PAJ_RS04240 925410 926300 - hypothetical protein gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04240 PAJ_RS04245 PAJ_RS04245 PAJ_RS04245 926925 927131 + hypothetical protein gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04245 PAJ_RS04250 PAJ_0775 PAJ_RS04250 927871 928140 + hypothetical protein gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04250 PAJ_RS04255 PAJ_RS04255 PAJ_RS04255 928250 928429 + hypothetical protein gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04255 PAJ_RS04260 PAJ_RS04260 PAJ_RS04260 928672 928869 + hypothetical protein gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04260 PAJ_RS04265 PAJ_0776 PAJ_RS04265 928906 930411 - transporter gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04265 PAJ_RS04270 PAJ_0777 PAJ_RS04270 930546 930806 - hypothetical protein gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04270 PAJ_RS04275 PAJ_RS04275 PAJ_RS04275 931177 931584 - hypothetical protein gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04275 PAJ_RS04280 PAJ_0778 PAJ_RS04280 931627 932472 - AraC family transcriptional regulator gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04280 PAJ_RS04285 PAJ_0779 PAJ_RS04285 932627 933055 + MarR family transcriptional regulator gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04285 PAJ_RS04290 PAJ_0780 PAJ_RS04290 933058 934744 + MFS transporter frameshifted gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04290 PAJ_RS04295 PAJ_0781 PAJ_RS04295 934741 935841 + multidrug transporter EmrA gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04295 PAJ_RS04300 PAJ_0782 PAJ_RS04300 935838 937217 + OprM gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04300 PAJ_RS04305 PAJ_0783 PAJ_RS04305 937715 938875 - beta-glucosidase gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04305 PAJ_RS04310 PAJ_0784 PAJ_RS04310 939032 940492 + hypothetical protein gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04310 PAJ_RS04315 PAJ_0785 opgC opgC 940524 941648 - glucans biosynthesis protein C required for the transfer of succinyl residues to osmoregulated periplasmic glucans gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04315 PAJ_RS04320 PAJ_0786 mdoG mdoG 941939 943468 + glucan biosynthesis protein D involved in the biosynthesis of osmoregulated periplasmic glucans%3B required for the assembly of the polyglucose structure of glucan gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04320 PAJ_RS04325 PAJ_0787 PAJ_RS04325 943461 946013 + glucan biosynthesis glucosyltransferase H necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04325 PAJ_RS04330 PAJ_0788 PAJ_RS04330 946161 946400 + hypothetical protein gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04330 PAJ_RS04335 PAJ_0789 PAJ_RS04335 946391 946792 - SecY/SecA suppressor protein gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04335 PAJ_RS04340 PAJ_RS04340 PAJ_RS04340 946957 947307 - hypothetical protein gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04340 PAJ_RS04345 PAJ_0790 PAJ_RS04345 947452 948939 - methyl viologen resistance protein SmvA gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04345 PAJ_RS04350 PAJ_0791 PAJ_RS04350 949054 949662 + TetR family transcriptional regulator gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04350 PAJ_RS04355 PAJ_RS04355 PAJ_RS04355 949689 950613 - lipid A biosynthesis lauroyl acyltransferase Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA%3B frameshifted gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04355 PAJ_RS04360 PAJ_0793 PAJ_RS04360 950874 951923 + sulfurtransferase gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04360 PAJ_RS04365 PAJ_0794 PAJ_RS04365 951962 952537 - hypothetical protein gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04365 PAJ_RS04370 PAJ_0795 PAJ_RS04370 952539 953114 - cytochrome b gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04370 PAJ_RS04375 PAJ_RS04375 PAJ_RS04375 953161 953349 + hypothetical protein gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04375 PAJ_RS04380 PAJ_0796 solA solA 953410 954525 - N-methyltryptophan oxidase catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04380 PAJ_RS04385 PAJ_0797 bssS bssS 954622 954876 - biofilm formation regulatory protein BssS BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04385 PAJ_RS04390 PAJ_RS04390 PAJ_RS04390 955124 955396 - hypothetical protein gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04390 PAJ_RS04395 PAJ_0798 PAJ_RS04395 955542 955787 - DNA damage-inducible protein I gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04395 PAJ_RS04400 PAJ_0799 PAJ_RS04400 955850 956893 - dihydroorotase gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04400 PAJ_RS04405 PAJ_0800 PAJ_RS04405 957050 957613 - lipoprotein gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04405 PAJ_RS04410 PAJ_0801 PAJ_RS04410 958045 958635 + alanine acetyltransferase gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04410 PAJ_RS04415 PAJ_0802 PAJ_RS04415 958651 959292 + hypothetical protein gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04415 PAJ_RS04420 PAJ_0803 PAJ_RS04420 959293 960213 + virulence factor MviM gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04420 PAJ_RS04425 PAJ_0805 PAJ_RS04425 960334 961872 + lipid II flippase MurJ gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04425 PAJ_RS04430 PAJ_0806 PAJ_RS04430 962229 963920 + hypothetical protein gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04430 PAJ_RS04435 PAJ_0807 PAJ_RS04435 964292 964723 - flagella synthesis chaperone protein FlgN export chaperone for FlgK and FlgL gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04435 PAJ_RS04440 PAJ_0808 PAJ_RS04440 964729 965031 - flagellar biosynthesis protein FlgM regulates the flagellar specific sigma28 transcription factor gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04440 PAJ_RS04445 PAJ_0809 PAJ_RS04445 965135 965794 - flagellar basal body P-ring biosynthesis protein FlgA gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04445 PAJ_RS04450 PAJ_0810 PAJ_RS04450 965948 966361 + flagellar biosynthesis protein FlgB gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04450 PAJ_RS04455 PAJ_0811 flgC flgC 966364 966768 + flagellar basal body rod protein FlgC with FlgF and B makes up the proximal portion of the flagellar basal body rod gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04455 PAJ_RS04460 PAJ_0812 flgD flgD 966781 967452 + flagellar basal body rod modification protein acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04460 PAJ_RS04465 PAJ_0813 flgE flgE 967479 968726 + flagellar hook protein FlgE the hook connects flagellar basal body to the flagellar filament gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04465 PAJ_RS04470 PAJ_0814 flgF flgF 968747 969505 + flagellar basal body rod protein FlgF FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04470 PAJ_RS04475 PAJ_0815 flgG flgG 969523 970305 + flagellar basal body rod protein FlgG makes up the distal portion of the flagellar basal body rod gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04475 PAJ_RS04480 PAJ_0816 flgH flgH 970365 971075 + flagellar basal body L-ring protein part of the flagellar basal body which consists of four rings L%2CP%2C S and M mounted on a central rod gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04480 PAJ_RS04485 PAJ_0817 flgI flgI 971085 972194 + flagellar basal body P-ring protein part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04485 PAJ_RS04490 PAJ_0818 flgJ flgJ 972194 973138 + flagellar rod assembly protein/muramidase FlgJ Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04490 PAJ_RS04495 PAJ_0819 flgK flgK 973263 974903 + flagellar hook-associated protein FlgK with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04495 PAJ_RS04500 PAJ_0820 flgL flgL 974918 975880 + flagellar hook-associated protein FlgL with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04500 PAJ_RS04505 PAJ_0821 rne rne 976163 979450 - ribonuclease E bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein%3B forms part of the membrane-associated degradosome complex along with PNPase%2C RhlB%2C and enolase gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04505 PAJ_RS04510 PAJ_0822 PAJ_RS04510 980022 980978 + 23S rRNA pseudouridine(955/2504/2580) synthase catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04510 PAJ_RS04515 PAJ_0823 PAJ_RS04515 980990 981577 - septum formation inhibitor Maf Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04515 PAJ_RS04520 PAJ_0824 PAJ_RS04520 981718 982239 + hypothetical protein gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04520 PAJ_RS04525 PAJ_0825 rpmF rpmF 982254 982424 + 50S ribosomal protein L32 some L32 proteins have zinc finger motifs consisting of CXXC while others do not gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04525 PAJ_RS04530 PAJ_0826 PAJ_RS04530 982450 983490 + phosphate acyltransferase gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04530 PAJ_RS04535 PAJ_0827 PAJ_RS04535 983491 984444 + 3-oxoacyl-ACP synthase FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04535 PAJ_RS04540 PAJ_0828 PAJ_RS04540 984461 985393 + malonyl CoA-acyl carrier protein transacylase gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04540 PAJ_RS04545 PAJ_0829 fabG fabG 985404 986138 + beta-ketoacyl-ACP reductase catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04545 PAJ_RS04550 PAJ_RS04550 PAJ_RS04550 986292 986528 + acyl carrier protein carries the fatty acid chain in fatty acid biosynthesis gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04550 PAJ_RS04555 PAJ_0831 PAJ_RS04555 986614 987855 + beta-ketoacyl-[acyl-carrier-protein] synthase II FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04555 PAJ_RS04560 PAJ_0832 PAJ_RS04560 987867 988793 + aminodeoxychorismate lyase catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04560 PAJ_RS04565 PAJ_0833 PAJ_RS04565 988790 989809 + cell division protein YceG gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04565 PAJ_RS04570 PAJ_0834 PAJ_RS04570 989799 990434 + dTMP kinase gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04570 PAJ_RS04575 PAJ_0835 PAJ_RS04575 990431 991420 + DNA polymerase III subunit delta' catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04575 PAJ_RS04580 PAJ_0836 PAJ_RS04580 991436 992227 + metal-dependent hydrolase gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04580 PAJ_RS04585 PAJ_0837 PAJ_RS04585 992517 993956 + PTS glucose transporter subunit IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04585 PAJ_RS04590 PAJ_0838 PAJ_RS04590 994060 995643 - methyl-accepting chemotaxis protein II Tar gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04590 PAJ_RS04595 PAJ_0839 PAJ_RS04595 996055 996405 + histidine triad nucleotide-binding protein gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04595 PAJ_RS04600 PAJ_0840 PAJ_RS04600 996426 996797 + membrane protein gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04600 PAJ_RS04605 PAJ_0841 PAJ_RS04605 996808 997404 + penicillin-binding protein activator LpoB gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04605 PAJ_RS04610 PAJ_RS04610 PAJ_RS04610 997364 998200 + thiamine kinase gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04610 PAJ_RS04615 PAJ_0843 PAJ_RS04615 998232 999272 + beta-N-acetylhexosaminidase hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04615 PAJ_RS04620 PAJ_0844 PAJ_RS04620 999311 999853 + hypothetical protein gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04620 PAJ_RS04625 PAJ_0845 PAJ_RS04625 1000123 1001370 + NADH dehydrogenase gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04625 PAJ_RS04630 PAJ_0846 PAJ_RS04630 1001659 1002201 + hypothetical protein gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04630 PAJ_RS04635 PAJ_0847 PAJ_RS04635 1002405 1002887 - MarR family transcriptional regulator gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04635 PAJ_RS04640 PAJ_0848 PAJ_RS04640 1002945 1003412 + alkylhydroperoxidase gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04640 PAJ_RS04645 PAJ_0849 PAJ_RS04645 1003527 1006976 - transcription-repair coupling factor gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04645 PAJ_RS04650 PAJ_0850 PAJ_RS04650 1007385 1008584 + transporter part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04650 PAJ_RS04655 PAJ_0851 lolD lolD 1008577 1009282 + lipoprotein ABC transporter ATP-binding protein outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone%3B frameshifted gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04655 PAJ_RS04660 PAJ_0852 PAJ_RS04660 1009282 1010526 + lipoprotein transporter subunit LolE part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04660 PAJ_RS04665 PAJ_0853 PAJ_RS04665 1010649 1011482 + NAD-dependent deacylase Modulates the activities of several enzymes which are inactive in their acetylated form gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04665 PAJ_RS04670 PAJ_0854 PAJ_RS04670 1011874 1013103 + peptidase T gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04670 PAJ_RS04675 PAJ_0855 PAJ_RS04675 1013168 1014292 - 50S ribosomal protein L16 arginine hydroxylase gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04675 PAJ_RS04680 PAJ_0856 PAJ_RS04680 1014350 1015816 - sensor protein PhoQ gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04680 PAJ_RS04685 PAJ_0857 PAJ_RS04685 1015819 1016487 - DNA-binding response regulator response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04685 PAJ_RS04690 PAJ_0858 PAJ_RS04690 1016595 1017965 - adenylosuccinate lyase Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04690 PAJ_RS04695 PAJ_0859 PAJ_RS04695 1018008 1018649 - lysogenization protein HflD HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04695 PAJ_RS04700 PAJ_0860 mnmA mnmA 1018684 1019796 - tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04700 PAJ_RS04705 PAJ_0861 PAJ_RS04705 1019836 1020309 - NUDIX hydrolase gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04705 PAJ_RS04710 PAJ_0862 PAJ_RS04710 1020358 1021017 - 23S rRNA pseudouridine synthase E catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04710 PAJ_RS04715 PAJ_0863 PAJ_RS04715 1021128 1022378 + isocitrate dehydrogenase (NADP(+)) Converts isocitrate to alpha ketoglutarate gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04715 PAJ_RS04720 PAJ_RS04720 PAJ_RS04720 1022495 1022704 - hypothetical protein gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04720 PAJ_RS04725 PAJ_0864 PAJ_RS04725 1023077 1024157 + ADP-heptose--lipooligosaccharide heptosyltransferase II frameshifted gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04725 PAJ_RS04730 PAJ_RS04730 PAJ_RS04730 1024396 1024635 + hypothetical protein gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04730 PAJ_RS04735 PAJ_0865 PAJ_RS04735 1024697 1025425 - fimbrial assembly protein gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04735 PAJ_RS04740 PAJ_0866 PAJ_RS04740 1025391 1026686 - fimbrial usher protein StbD gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04740 PAJ_RS04745 PAJ_0867 PAJ_RS04745 1026724 1029285 - fimbrial assembly protein gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04745 PAJ_RS04750 PAJ_0868 PAJ_RS04750 1029257 1030018 - fimbrial chaperone protein StbB gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04750 PAJ_RS04755 PAJ_0869 PAJ_RS04755 1030076 1030618 - fimbrial protein gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04755 PAJ_RS04760 PAJ_0870 PAJ_RS04760 1030640 1031461 - hypothetical protein gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04760 PAJ_RS04765 PAJ_RS04765 PAJ_RS04765 1031830 1032030 + hypothetical protein gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04765 PAJ_RS04770 PAJ_RS04770 PAJ_RS04770 1032121 1032384 + hypothetical protein gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04770 PAJ_RS04775 PAJ_0871 PAJ_RS04775 1032507 1033709 + monooxygenase gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04775 PAJ_RS04780 PAJ_0872 PAJ_RS04780 1033878 1034441 + transcriptional regulator gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04780 PAJ_RS04785 PAJ_0873 PAJ_RS04785 1034446 1035024 - bilin biosynthesis protein CpeZ gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04785 PAJ_RS04790 PAJ_0874 PAJ_RS04790 1035242 1036675 - transporter gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04790 PAJ_RS04795 PAJ_0875 PAJ_RS04795 1036681 1039842 - multidrug efflux RND transporter permease subunit gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04795 PAJ_RS04800 PAJ_0876 PAJ_RS04800 1039844 1040992 - acriflavine resistance protein E gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04800 PAJ_RS04805 PAJ_RS04805 PAJ_RS04805 1041306 1041668 - hypothetical protein gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04805 PAJ_RS04810 PAJ_0877 PAJ_RS04810 1041781 1043055 + nucleoside transporter gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04810 PAJ_RS04815 PAJ_0878 PAJ_RS04815 1043066 1044082 + hypothetical protein gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04815 PAJ_RS04820 PAJ_0879 PAJ_RS04820 1044075 1045055 + carbohydrate kinase gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04820 PAJ_RS04825 PAJ_0880 PAJ_RS04825 1045042 1045785 - GntR family transcriptional regulator gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04825 PAJ_RS04830 PAJ_0881 PAJ_RS04830 1045884 1047170 + MFS transporter gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04830 PAJ_RS04835 PAJ_RS04835 PAJ_RS04835 1047206 1047454 - hypothetical protein gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04835 PAJ_RS04840 PAJ_0882 PAJ_RS04840 1047682 1048248 - hypothetical protein gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04840 PAJ_RS04845 PAJ_RS04845 PAJ_RS04845 1048314 1048643 - hypothetical protein gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04845 PAJ_RS04850 PAJ_RS04850 PAJ_RS04850 1048852 1049031 + hypothetical protein gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04850 PAJ_RS04855 PAJ_RS04855 PAJ_RS04855 1049220 1049603 + hypothetical protein gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04855 PAJ_RS04860 PAJ_0883 PAJ_RS04860 1049626 1050039 + biphenyl 2%2C3-dioxygenase gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04860 PAJ_RS04865 PAJ_0884 PAJ_RS04865 1050040 1050699 - hypothetical protein gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04865 PAJ_RS04870 PAJ_0885 PAJ_RS04870 1050722 1051645 - muramoyltetrapeptide carboxypeptidase gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04870 PAJ_RS04875 PAJ_0886 PAJ_RS04875 1051801 1052433 + lytic transglycosylase gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04875 PAJ_RS04880 PAJ_0887 PAJ_RS04880 1052484 1053431 - DNA-binding transcriptional regulator gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04880 PAJ_RS04885 PAJ_0888 PAJ_RS04885 1053732 1054562 + transketolase gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04885 PAJ_RS04890 PAJ_0889 PAJ_RS04890 1054555 1055499 + transketolase gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04890 PAJ_RS04895 PAJ_0890 PAJ_RS04895 1055502 1056989 + glycerol kinase gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04895 PAJ_RS04900 PAJ_0891 PAJ_RS04900 1057042 1058175 - mechanosensitive ion channel protein MscS gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04900 PAJ_RS04905 PAJ_0892 PAJ_RS04905 1058273 1059008 - flagellar brake protein frameshifted gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04905 PAJ_RS04910 PAJ_0893 PAJ_RS04910 1059220 1059468 + membrane protein gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04910 PAJ_RS04915 PAJ_0894 treA treA 1059541 1061226 - trehalase periplasmic%3B catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04915 PAJ_RS04920 PAJ_0895 ghrA ghrA 1061438 1062379 + glyoxylate/hydroxypyruvate reductase A catalyzes the formation of glycolate and glycerate from glyoxylate and hydroxypyruvate%2C respectively gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04920 PAJ_RS04925 PAJ_0896 PAJ_RS04925 1062417 1063154 + phosphatase gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04925 PAJ_RS04930 PAJ_0897 PAJ_RS04930 1063182 1063751 + molecular chaperone gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04930 PAJ_RS04935 PAJ_0898 PAJ_RS04935 1063753 1065114 - CoA transferase gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04935 PAJ_RS04940 PAJ_0899 PAJ_RS04940 1065162 1066046 - DMT family permease gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04940 PAJ_RS04945 PAJ_0900 PAJ_RS04945 1066236 1066958 + GMP synthase gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04945 PAJ_RS04950 PAJ_0901 PAJ_RS04950 1066946 1067509 - methyltransferase gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04950 PAJ_RS04955 PAJ_0902 PAJ_RS04955 1067745 1069265 + aldehyde dehydrogenase gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04955 PAJ_RS04960 PAJ_RS04960 PAJ_RS04960 1069442 1069633 + hypothetical protein gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04960 PAJ_RS04965 PAJ_0903 PAJ_RS04965 1070101 1071309 + oxalate decarboxylase gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04965 PAJ_RS04970 PAJ_0904 PAJ_RS04970 1071431 1072120 - hypothetical protein gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04970 PAJ_RS04975 PAJ_0905 PAJ_RS04975 1072178 1073140 - hypothetical protein gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04975 PAJ_RS04980 PAJ_0906 PAJ_RS04980 1073265 1074737 - 6-phospho-beta-glucosidase gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04980 PAJ_RS04985 PAJ_0907 PAJ_RS04985 1074748 1076595 - PTS beta-glucoside transporter subunit EIIBCA gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04985 PAJ_RS04990 PAJ_0908 PAJ_RS04990 1076718 1077572 - transcription antiterminator LicT gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04990 PAJ_RS04995 PAJ_0909 PAJ_RS04995 1077927 1078826 - LysR family transcriptional regulator gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS04995 PAJ_RS05000 PAJ_0910 PAJ_RS05000 1078926 1080491 + NADH dehydrogenase Catalyzes the transfer of electrons from NADH to ubiquinone gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05000 PAJ_RS05005 PAJ_0911 PAJ_RS05005 1080521 1083058 + hypothetical protein gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05005 PAJ_RS05010 PAJ_0912 PAJ_RS05010 1083668 1084786 + alkene reductase gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05010 PAJ_RS05015 PAJ_RS05015 PAJ_RS05015 1084801 1085115 + transcriptional regulator gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05015 PAJ_RS05020 PAJ_0913 PAJ_RS05020 1085346 1085825 - GNAT family N-acetyltransferase gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05020 PAJ_RS05025 PAJ_RS05025 PAJ_RS05025 1086134 1086667 - GNAT family N-acetyltransferase gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05025 PAJ_RS05030 PAJ_0914 PAJ_RS05030 1086867 1087469 - hypothetical protein gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05030 PAJ_RS05035 PAJ_0915 PAJ_RS05035 1087929 1089581 + methyl-accepting chemotaxis protein II Tar gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05035 PAJ_RS05040 PAJ_0916 PAJ_RS05040 1090135 1090602 + N-acetyltransferase GCN5 gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05040 PAJ_RS05045 PAJ_0917 PAJ_RS05045 1090758 1091393 - peptidase gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05045 PAJ_RS05050 PAJ_0918 PAJ_RS05050 1091738 1093012 - MFS transporter gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05050 PAJ_RS05055 PAJ_0919 PAJ_RS05055 1092987 1094057 - amidohydrolase gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05055 PAJ_RS05060 PAJ_0920 PAJ_RS05060 1094789 1095484 + dimethylglycine dehydrogenase gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05060 PAJ_RS05065 PAJ_0921 PAJ_RS05065 1095724 1096617 - dihydrodipicolinate synthase family protein gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05065 PAJ_RS05070 PAJ_0922 PAJ_RS05070 1097395 1099569 - ferrichrome porin FhuA involved with the transport of ferrichrome across the outer membrane%3B binds the ferrichrome-iron ligand and interacts with the TonB protein gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05070 PAJ_RS05075 PAJ_0923 PAJ_RS05075 1100420 1101268 - AraC family transcriptional regulator gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05075 PAJ_RS05080 PAJ_RS05080 PAJ_RS05080 1101376 1101864 + hypothetical protein gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05080 PAJ_RS05085 PAJ_0924 PAJ_RS05085 1102003 1102683 - dihydroxy-acid dehydratase catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05085 PAJ_RS05090 PAJ_0925 PAJ_RS05090 1102978 1104387 - hypothetical protein gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05090 PAJ_RS05095 PAJ_0926 PAJ_RS05095 1104516 1105088 + transcriptional regulator gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05095 PAJ_RS05100 PAJ_RS05100 PAJ_RS05100 1105479 1105751 - hypothetical protein gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05100 PAJ_RS05105 PAJ_RS05105 PAJ_RS05105 1106139 1106351 + hypothetical protein gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05105 PAJ_RS05110 PAJ_0927 PAJ_RS05110 1106378 1106962 + transcriptional regulator gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05110 PAJ_RS05115 PAJ_RS05115 PAJ_RS05115 1106982 1107425 - acetyltransferase gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05115 PAJ_RS05120 PAJ_0928 PAJ_RS05120 1107834 1108565 + hypothetical protein gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05120 PAJ_RS05125 PAJ_0929 PAJ_RS05125 1108647 1109264 + hypothetical protein gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05125 PAJ_RS05130 PAJ_RS05130 PAJ_RS05130 1109699 1110208 + hypothetical protein gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05130 PAJ_RS05135 PAJ_0930 PAJ_RS05135 1110166 1111179 - transposase gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05135 PAJ_RS05140 PAJ_0931 PAJ_RS05140 1111601 1112602 + vegetative incompatibility protein HET-E-1 gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05140 PAJ_RS05145 PAJ_0932 PAJ_RS05145 1112754 1113914 + C4-dicarboxylate ABC transporter gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05145 PAJ_RS05150 PAJ_0933 PAJ_RS05150 1113911 1114510 + uracil-DNA glycosylase gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05150 PAJ_RS05155 PAJ_RS05155 PAJ_RS05155 1114890 1115126 + hypothetical protein incomplete%3B partial in the middle of a contig%3B missing start gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05155 PAJ_RS05160 PAJ_0934 PAJ_RS05160 1115400 1119215 - hypothetical protein gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05160 PAJ_RS05165 PAJ_0935 PAJ_RS05165 1119632 1120795 - alpha-hydroxy-acid oxidizing enzyme gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05165 PAJ_RS05170 PAJ_RS05170 PAJ_RS05170 1120808 1121026 - hypothetical protein gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05170 PAJ_RS05175 PAJ_0936 PAJ_RS05175 1121292 1121813 + GNAT family acetyltransferase gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05175 PAJ_RS05180 PAJ_0937 PAJ_RS05180 1121894 1122790 - phenazine biosynthesis protein PhzF family gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05180 PAJ_RS05185 PAJ_0938 PAJ_RS05185 1123032 1123487 + N-acetyltransferase GCN5 gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05185 PAJ_RS05190 PAJ_0939 PAJ_RS05190 1123847 1124425 - transcriptional regulator gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05190 PAJ_RS05195 PAJ_0940 PAJ_RS05195 1124489 1124998 + acetyltransferase gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05195 PAJ_RS05200 PAJ_0941 PAJ_RS05200 1125348 1126298 - FimH mannose-binding domain protein gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05200 PAJ_RS05205 PAJ_0942 PAJ_RS05205 1126359 1126871 - type 1 fimbrial adaptor subunit FimG gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05205 PAJ_RS05210 PAJ_0943 PAJ_RS05210 1126888 1127379 - fimbrial protein gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05210 PAJ_RS05215 PAJ_0944 PAJ_RS05215 1127426 1130011 - fimbrial protein gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05215 PAJ_RS05220 PAJ_0945 PAJ_RS05220 1130030 1130731 - molecular chaperone FimC involved in type 1 fimbriae biosynthesis%2C interacts with FimH gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05220 PAJ_RS05225 PAJ_0946 PAJ_RS05225 1130784 1131305 - hypothetical protein gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05225 PAJ_RS05230 PAJ_0947 fimA fimA 1131337 1131894 - type-1 fimbrial protein subunit A gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05230 PAJ_RS05235 PAJ_0948 PAJ_RS05235 1132831 1133610 + putative cyclic diguanylate phosphodiesterase gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05235 PAJ_RS05240 PAJ_0949 PAJ_RS05240 1133649 1134341 + hypothetical protein gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05240 PAJ_RS05245 PAJ_0950 PAJ_RS05245 1134562 1135692 + autotransporter strand-loop-strand O-heptosyltransferase gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05245 PAJ_RS05250 PAJ_0951 PAJ_RS05250 1135771 1140252 + transporter gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05250 PAJ_RS05255 PAJ_0952 PAJ_RS05255 1140350 1141246 - LysR family transcriptional regulator gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05255 PAJ_RS05260 PAJ_0953 PAJ_RS05260 1141395 1142234 + membrane protein gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05260 PAJ_RS05265 PAJ_0954 PAJ_RS05265 1143110 1143811 + cell wall-associated hydrolases (invasion-associated proteins) gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05265 PAJ_RS05270 PAJ_0955 PAJ_RS05270 1144172 1144609 - hypothetical protein gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05270 PAJ_RS05275 PAJ_0956 PAJ_RS05275 1145159 1145734 + hypothetical protein gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05275 PAJ_RS05280 PAJ_0957 PAJ_RS05280 1145750 1146568 - membrane protein gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05280 PAJ_RS05285 PAJ_0958 PAJ_RS05285 1146565 1147122 - RNA polymerase subunit sigma-24 gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05285 PAJ_RS05290 PAJ_0959 PAJ_RS05290 1147103 1147654 - hypothetical protein gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05290 PAJ_RS05295 PAJ_0960 PAJ_RS05295 1147668 1148246 - cytochrome b gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05295 PAJ_RS05300 PAJ_0961 PAJ_RS05300 1148542 1149522 + 3-phosphoglycerate dehydrogenase gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05300 PAJ_RS05305 PAJ_RS05305 PAJ_RS05305 1149519 1149848 + hypothetical protein gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05305 PAJ_RS05310 PAJ_0962 PAJ_RS05310 1150567 1152150 + aspartate:proton symporter gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05310 PAJ_RS05315 PAJ_0963 PAJ_RS05315 1152210 1152458 - hypothetical protein gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05315 PAJ_RS05320 PAJ_0964 PAJ_RS05320 1152768 1153243 - diaminohydroxyphosphoribosylaminopyrimidine deaminase frameshifted gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05320 PAJ_RS05325 PAJ_RS05325 PAJ_RS05325 1153404 1153613 + hypothetical protein gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05325 PAJ_RS05330 PAJ_0965 PAJ_RS05330 1153804 1154151 + HNH endonuclease gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05330 PAJ_RS05335 PAJ_0966 PAJ_RS05335 1154539 1155522 + hypothetical protein gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05335 PAJ_RS05340 PAJ_0967 PAJ_RS05340 1155548 1156579 + 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05340 PAJ_RS05345 PAJ_RS05345 PAJ_RS05345 1156807 1157016 - hypothetical protein gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05345 PAJ_RS05350 PAJ_RS05350 PAJ_RS05350 1157102 1157281 + hypothetical protein gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05350 PAJ_RS05355 PAJ_0968 PAJ_RS05355 1157348 1157830 - glutathione peroxidase gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05355 PAJ_RS05360 PAJ_0969 PAJ_RS05360 1158032 1158454 - transcriptional regulator gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05360 PAJ_RS05365 PAJ_0970 PAJ_RS05365 1158650 1159246 + phenolic acid decarboxylase gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05365 PAJ_RS05370 PAJ_0971 PAJ_RS05370 1159246 1160673 + phenolic acid decarboxylase subunit C gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05370 PAJ_RS05375 PAJ_0973 PAJ_RS05375 1161111 1162289 - membrane protein gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05375 PAJ_RS05380 PAJ_RS05380 PAJ_RS05380 1163036 1163266 + hypothetical protein gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05380 PAJ_RS05385 PAJ_RS05385 PAJ_RS05385 1163291 1163584 + hypothetical protein gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05385 PAJ_RS05390 PAJ_0974 PAJ_RS05390 1163922 1165367 + D-xylose-proton symporter XylE gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05390 PAJ_RS05395 PAJ_0975 PAJ_RS05395 1165386 1166309 + AP endonuclease gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05395 PAJ_RS05400 PAJ_0976 PAJ_RS05400 1166324 1167502 + oxidoreductase gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05400 PAJ_RS05405 PAJ_RS05405 PAJ_RS05405 1168118 1168414 - hypothetical protein gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05405 PAJ_RS05410 PAJ_0977 PAJ_RS05410 1168773 1170737 + chemoreceptor gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05410 PAJ_RS05415 PAJ_0978 PAJ_RS05415 1170911 1172335 - trehalose-6-phosphate synthase gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05415 PAJ_RS05420 PAJ_0979 PAJ_RS05420 1172447 1172998 - GCN5-related N-acetyltransferase gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05420 PAJ_RS05425 PAJ_0980 PAJ_RS05425 1173815 1174834 + hypothetical protein gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05425 PAJ_RS05430 PAJ_RS05430 PAJ_RS05430 1174964 1175353 + hypothetical protein gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05430 PAJ_RS05435 PAJ_0981 PAJ_RS05435 1176784 1177593 + hypothetical protein gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05435 PAJ_RS05440 PAJ_RS05440 PAJ_RS05440 1177725 1177976 + hypothetical protein gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05440 PAJ_RS05445 PAJ_0982 PAJ_RS05445 1178821 1181415 + hypothetical protein gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05445 PAJ_RS05450 PAJ_0983 PAJ_RS05450 1181924 1182718 - transposase gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05450 PAJ_RS05455 PAJ_RS05455 PAJ_RS05455 1182769 1183035 - transposase gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05455 PAJ_RS05460 PAJ_0984 ychF ychF 1183381 1184472 - GTP-binding protein YchF EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1 gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05460 PAJ_RS05465 PAJ_0985 PAJ_RS05465 1184579 1185166 - aminoacyl-tRNA hydrolase gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05465 PAJ_RS05470 PAJ_0986 PAJ_RS05470 1185427 1185705 + membrane protein gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05470 PAJ_RS05475 PAJ_0987 PAJ_RS05475 1185697 1186851 - cellulose synthase gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05475 PAJ_RS05480 PAJ_0988 PAJ_RS05480 1187072 1188010 - ribose-phosphate pyrophosphokinase catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05480 PAJ_RS05485 PAJ_0989 PAJ_RS05485 1188156 1189013 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05485 PAJ_RS05490 PAJ_0990 PAJ_RS05490 1189010 1189633 - outer membrane lipoprotein LolB gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05490 PAJ_RS05495 PAJ_0991 hemA hemA 1189851 1191107 + glutamyl-tRNA reductase catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05495 PAJ_RS05500 PAJ_0992 prfA prfA 1191150 1192232 + peptide chain release factor 1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2 gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05500 PAJ_RS05505 PAJ_0993 PAJ_RS05505 1192232 1193074 + N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05505 PAJ_RS05510 PAJ_0994 PAJ_RS05510 1193116 1193514 + siroheme synthase gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05510 PAJ_RS05515 PAJ_0995 PAJ_RS05515 1193511 1194320 + hypothetical protein gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05515 PAJ_RS05520 PAJ_0996 PAJ_RS05520 1194346 1195200 + 3-deoxy-8-phosphooctulonate synthase catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05520 PAJ_RS05525 PAJ_0998 PAJ_RS05525 1195267 1196358 - sodium:proton antiporter gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05525 PAJ_RS05530 PAJ_0999 chaB chaB 1196724 1196954 + cation transport regulator in Escherichia coli this protein putatively regulates the sodium/proton (also pH-independent calcium/proton) antiporter chaA%3B has weak affinity for calcium and magnesium ions gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05530 PAJ_RS05535 PAJ_1000 PAJ_RS05535 1197383 1198081 + transporter gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05535 PAJ_RS05540 PAJ_1001 PAJ_RS05540 1198142 1199554 - nuclease PIN gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05540 PAJ_RS05545 PAJ_1002 PAJ_RS05545 1199599 1200546 - hypothetical protein gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05545 PAJ_RS05550 PAJ_1003 PAJ_RS05550 1200560 1201336 - serine/threonine phosphatase gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05550 PAJ_RS05555 PAJ_1004 PAJ_RS05555 1201333 1202460 - hypothetical protein gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05555 PAJ_RS05560 PAJ_1005 PAJ_RS05560 1202495 1203193 - type VI secretion-associated protein gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05560 PAJ_RS05565 PAJ_1006 PAJ_RS05565 1203207 1205315 - type VI secretion system protein ImpL gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05565 PAJ_RS05570 PAJ_1007 PAJ_RS05570 1205315 1206532 - membrane protein gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05570 PAJ_RS05575 PAJ_RS05575 PAJ_RS05575 1206603 1207091 - hypothetical protein gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05575 PAJ_RS05580 PAJ_1008 PAJ_RS05580 1207578 1208801 + nitrate regulatory protein NasR gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05580 PAJ_RS05585 PAJ_1009 PAJ_RS05585 1209059 1210309 + nitrate transporter NrtA gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05585 PAJ_RS05590 PAJ_1010 PAJ_RS05590 1210321 1211193 + nitrate ABC transporter%2C permease protein gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05590 PAJ_RS05595 PAJ_1011 PAJ_RS05595 1211204 1211992 + nitrate ABC transporter ATP-binding protein gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05595 PAJ_RS05600 PAJ_1012 PAJ_RS05600 1213194 1216076 + nitrite reductase gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05600 PAJ_RS05605 PAJ_1013 PAJ_RS05605 1216073 1218694 + nitrate reductase gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05605 PAJ_RS05610 PAJ_1014 PAJ_RS05610 1218691 1219512 + uroporphyrinogen III methyltransferase gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05610 PAJ_RS05615 PAJ_1015 PAJ_RS05615 1219543 1220355 - DeoR family transcriptional regulator gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05615 PAJ_RS05620 PAJ_1016 PAJ_RS05620 1220698 1221492 + D-threitol dehydrogenase gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05620 PAJ_RS05625 PAJ_1017 PAJ_RS05625 1221547 1222482 + ABC transporter substrate-binding protein gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05625 PAJ_RS05630 PAJ_1018 PAJ_RS05630 1222528 1223139 + hypothetical protein gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05630 PAJ_RS05635 PAJ_1019 PAJ_RS05635 1223150 1224676 + sugar ABC transporter ATP-binding protein gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05635 PAJ_RS05640 PAJ_1020 PAJ_RS05640 1224694 1225761 + ABC transporter permease gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05640 PAJ_RS05645 PAJ_1021 PAJ_RS05645 1225774 1226568 + SDR family oxidoreductase gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05645 PAJ_RS05650 PAJ_1022 PAJ_RS05650 1226707 1228179 + YchO family inverse autotransporter domain-containing protein gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05650 PAJ_RS05655 PAJ_1023 PAJ_RS05655 1228603 1229682 - porin OmpC gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05655 PAJ_RS05660 PAJ_1024 PAJ_RS05660 1230570 1231790 + acetylornithine aminotransferase catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate%3B also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05660 PAJ_RS05665 PAJ_1025 PAJ_RS05665 1231787 1232818 + arginine N-succinyltransferase gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05665 PAJ_RS05670 PAJ_1026 astD astD 1232815 1234281 + N-succinylglutamate 5-semialdehyde dehydrogenase a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity%3B converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05670 PAJ_RS05675 PAJ_1027 PAJ_RS05675 1234281 1235606 + succinylarginine dihydrolase catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine%2C ammonia and carbon dioxide in arginine degradation gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05675 PAJ_RS05680 PAJ_1028 PAJ_RS05680 1235656 1236651 + succinylglutamate desuccinylase catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05680 PAJ_RS05685 PAJ_1029 PAJ_RS05685 1236934 1237425 + ATP-independent periplasmic protein-refolding chaperone periplasmic protein induced by stress response via Cpx and BaeSR system%3B similar to CpxP gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05685 PAJ_RS05690 PAJ_1030 PAJ_RS05690 1237507 1238370 - nucleotide excision repair endonuclease 3' incision activity%3B acts with UvrC gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05690 PAJ_RS05695 PAJ_1031 PAJ_RS05695 1238437 1239327 - aromatic amino acid exporter gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05695 PAJ_RS05700 PAJ_1032 PAJ_RS05700 1239864 1241519 + methyl-accepting chemotaxis protein II Tar gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05700 PAJ_RS05705 PAJ_1033 nadE nadE 1241597 1242421 - NAD(+) synthetase catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05705 PAJ_RS05710 PAJ_1034 PAJ_RS05710 1242539 1243741 - Bcr/CflA family drug resistance efflux transporter gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05710 PAJ_RS05715 PAJ_1035 PAJ_RS05715 1243967 1244302 + transcriptional regulator osmotically-inducible lipoprotein E%3B activator of ntr-like gene protein gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05715 PAJ_RS05720 PAJ_RS05720 PAJ_RS05720 1244358 1244756 - hypothetical protein gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05720 PAJ_RS05725 PAJ_1036 PAJ_RS05725 1244952 1246343 - L-cystine transporter tcyP gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05725 PAJ_RS05730 PAJ_1037 PAJ_RS05730 1246495 1247085 - membrane protein gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05730 PAJ_RS05735 PAJ_1038 PAJ_RS05735 1247215 1247883 - 2-deoxyglucose-6-phosphatase YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05735 PAJ_RS05740 PAJ_1039 PAJ_RS05740 1248040 1248576 + yfeABCD regulator yfeE gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05740 PAJ_RS05745 PAJ_RS05745 PAJ_RS05745 1248581 1249473 - hypothetical protein frameshifted gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05745 PAJ_RS05750 PAJ_1041 PAJ_RS05750 1249552 1249854 - hypothetical protein gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05750 PAJ_RS05755 PAJ_1042 PAJ_RS05755 1250206 1250967 + membrane protein gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05755 PAJ_RS05760 PAJ_1043 thrS thrS 1251214 1253142 + threonine--tRNA ligase catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05760 PAJ_RS05765 PAJ_1044 PAJ_RS05765 1253146 1253697 + translation initiation factor IF-3 gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05765 PAJ_RS05770 PAJ_1045 PAJ_RS05770 1253798 1253995 + 50S ribosomal protein L35 gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05770 PAJ_RS05775 PAJ_1046 rplT rplT 1254040 1254396 + 50S ribosomal protein L20 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05775 PAJ_RS05780 PAJ_1047 PAJ_RS05780 1254711 1255694 + phenylalanine--tRNA ligase subunit alpha gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05780 PAJ_RS05785 PAJ_1048 pheT pheT 1255709 1258096 + phenylalanine--tRNA ligase subunit beta catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05785 PAJ_RS05790 PAJ_1049 ihfA ihfA 1258101 1258403 + integration host factor subunit alpha This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05790 PAJ_RS05795 PAJ_1050 PAJ_RS05795 1258503 1259492 + vitamin B12 ABC transporter permease BtuC gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05795 PAJ_RS05800 PAJ_1051 btuE btuE 1259526 1260071 + glutathione peroxidase similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05800 PAJ_RS05805 PAJ_1052 PAJ_RS05805 1260072 1260821 + vitamin B12 ABC transporter ATP-binding protein BtuD ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05805 PAJ_RS05810 PAJ_RS05810 PAJ_RS05810 1260888 1261347 + endopeptidase frameshifted gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05810 PAJ_RS05815 PAJ_1054 PAJ_RS05815 1261638 1262372 + diguanylate phosphodiesterase gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05815 PAJ_RS05820 PAJ_1055 PAJ_RS05820 1262463 1263899 + hypothetical protein gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05820 PAJ_RS05825 PAJ_1056 PAJ_RS05825 1263901 1264947 - 3-deoxy-7-phosphoheptulonate synthase gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05825 PAJ_RS05830 PAJ_1057 PAJ_RS05830 1265100 1265927 - phosphoenolpyruvate synthase regulatory protein gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05830 PAJ_RS05835 PAJ_1058 PAJ_RS05835 1266345 1268729 + phosphoenolpyruvate synthase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05835 PAJ_RS05840 PAJ_RS05840 rprA rprA 1268795 1268903 - antisense sRNA RprA ncRNA gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05840 PAJ_RS05845 PAJ_1059 PAJ_RS05845 1269158 1270258 - hypothetical protein YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05845 PAJ_RS05850 PAJ_1060 PAJ_RS05850 1270467 1273520 + membrane protein gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05850 PAJ_RS05855 PAJ_RS05855 PAJ_RS05855 1273552 1273956 - hypothetical protein gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05855 PAJ_RS05860 PAJ_1061 sufA sufA 1274345 1274719 + Fe-S cluster assembly scaffold SufA functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05860 PAJ_RS05865 PAJ_1062 PAJ_RS05865 1274727 1276220 + Fe-S cluster assembly protein SufB with SufCD activates cysteine desulfurase SufS gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05865 PAJ_RS05870 PAJ_1063 sufC sufC 1276267 1277013 + ABC transporter ATP-binding protein part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05870 PAJ_RS05875 PAJ_1064 PAJ_RS05875 1276988 1278265 + FeS cluster assembly protein SufD gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05875 PAJ_RS05880 PAJ_1065 PAJ_RS05880 1278265 1279488 + bifunctional cysteine desulfurase/selenocysteine lyase gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05880 PAJ_RS05885 PAJ_1066 PAJ_RS05885 1279510 1279926 + cysteine desulfuration protein SufE Acts with SufS to catalyze the formation of L-alanine from L-cysteine gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05885 PAJ_RS05890 PAJ_1067 PAJ_RS05890 1279983 1280963 + murein transpeptidase gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05890 PAJ_RS05895 PAJ_1068 PAJ_RS05895 1281038 1281274 - murein lipoprotein major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05895 PAJ_RS05900 PAJ_1069 PAJ_RS05900 1281581 1282993 - pyruvate kinase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05900 PAJ_RS05905 PAJ_t0020 PAJ_RS05905 1283340 1283416 - tRNA-Val tRNA gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05905 PAJ_RS05910 PAJ_t0021 PAJ_RS05910 1283427 1283503 - tRNA-Val tRNA gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05910 PAJ_RS05915 PAJ_t0022 PAJ_RS05915 1283507 1283583 - tRNA-Val tRNA gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05915 PAJ_RS05920 PAJ_1070 PAJ_RS05920 1283737 1285110 - MATE family efflux transporter NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05920 PAJ_RS05925 PAJ_1071 PAJ_RS05925 1285315 1285986 + riboflavin synthase subunit alpha catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05925 PAJ_RS05930 PAJ_1073 PAJ_RS05930 1286278 1287426 - cyclopropane-fatty-acyl-phospholipid synthase catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05930 PAJ_RS05935 PAJ_1075 PAJ_RS05935 1287713 1288915 - Bcr/CflA family drug resistance efflux transporter uncharacterized member of the major facilitator superfamily (MFS) gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05935 PAJ_RS05940 PAJ_1076 PAJ_RS05940 1289024 1289929 + LysR family transcriptional regulator gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05940 PAJ_RS05945 PAJ_1077 PAJ_RS05945 1289926 1290953 - transcriptional regulator binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers%3B frameshifted gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05945 PAJ_RS05950 PAJ_1078 PAJ_RS05950 1291389 1292210 - endopeptidase gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05950 PAJ_RS05955 PAJ_1079 PAJ_RS05955 1292578 1292910 + glutaredoxin gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05955 PAJ_RS05960 PAJ_1080 PAJ_RS05960 1292956 1293627 - ribonuclease T Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A) gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05960 PAJ_RS05965 PAJ_1081 PAJ_RS05965 1293747 1294154 - lactoylglutathione lyase Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05965 PAJ_RS05970 PAJ_1082 PAJ_RS05970 1294265 1295362 - alkene reductase FMN-linked%3B catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05970 PAJ_RS05975 PAJ_1083 PAJ_RS05975 1295408 1296010 - TetR family transcriptional regulator gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05975 PAJ_RS05980 PAJ_1084 PAJ_RS05980 1296494 1297390 + oxidoreductase gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05980 PAJ_RS05985 PAJ_1085 PAJ_RS05985 1297472 1297990 + superoxide dismutase gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05985 PAJ_RS05990 PAJ_1086 PAJ_RS05990 1298127 1298594 + hypothetical protein gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05990 PAJ_RS05995 PAJ_1087 PAJ_RS05995 1298595 1300595 - fusaric acid resistance protein gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS05995 PAJ_RS06000 PAJ_1088 PAJ_RS06000 1300592 1301458 - membrane protein gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06000 PAJ_RS06005 PAJ_1089 PAJ_RS06005 1301455 1301697 - membrane protein gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06005 PAJ_RS06010 PAJ_1090 PAJ_RS06010 1301839 1302276 + MarR family transcriptional regulator Transcription regulator that can both activate or repress expression gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06010 PAJ_RS06015 PAJ_1091 PAJ_RS06015 1302321 1302788 - hypothetical protein gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06015 PAJ_RS06020 PAJ_1092 anmK anmK 1303073 1304209 + anhydro-N-acetylmuramic acid kinase catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06020 PAJ_RS06025 PAJ_RS06025 PAJ_RS06025 1304242 1304475 - hypothetical protein gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06025 PAJ_RS06030 PAJ_1093 PAJ_RS06030 1304705 1305916 - diguanylate phosphodiesterase gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06030 PAJ_RS06035 PAJ_1094 PAJ_RS06035 1307134 1307898 - 3-oxoacyl-ACP reductase gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06035 PAJ_RS06040 PAJ_1095 PAJ_RS06040 1308035 1310107 - glycogen debranching enzyme gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06040 PAJ_RS06045 PAJ_1096 PAJ_RS06045 1310167 1312698 - malto-oligosyltrehalose synthase gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06045 PAJ_RS06050 PAJ_1097 PAJ_RS06050 1312695 1314482 - malto-oligosyltrehalose trehalohydrolase gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06050 PAJ_RS06055 PAJ_1098 katE katE 1314956 1317220 - catalase HPII Catalase HPII%3B monofunctional catalase that decomposes hydrogen peroxide into water and oxygen%3B serves to protect cells from the toxic effects of hydrogen peroxide gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06055 PAJ_RS06060 PAJ_1099 PAJ_RS06060 1317741 1317917 - stress-induced protein gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06060 PAJ_RS06065 PAJ_1100 PAJ_RS06065 1318247 1319215 + UV damage repair endonuclease gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06065 PAJ_RS06070 PAJ_RS06070 PAJ_RS06070 1319263 1319451 - hypothetical protein gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06070 PAJ_RS06075 PAJ_1101 PAJ_RS06075 1319815 1320072 - hypothetical protein gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06075 PAJ_RS06080 PAJ_RS06080 PAJ_RS06080 1320748 1320972 + hypothetical protein gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06080 PAJ_RS06085 PAJ_1102 PAJ_RS06085 1321079 1321870 - hypothetical protein gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06085 PAJ_RS06090 PAJ_1103 PAJ_RS06090 1322111 1322992 - class A beta-lactamase gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06090 PAJ_RS06095 PAJ_1104 PAJ_RS06095 1323283 1324158 + LysR family transcriptional regulator gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06095 PAJ_RS06100 PAJ_RS06100 PAJ_RS06100 1324305 1324583 - hypothetical protein gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06100 PAJ_RS06105 PAJ_RS06105 PAJ_RS06105 1325153 1325377 - hypothetical protein gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06105 PAJ_RS06110 PAJ_1105 PAJ_RS06110 1325529 1325894 + DNA polymerase V subunit UmuD binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06110 PAJ_RS06115 PAJ_1106 PAJ_RS06115 1325897 1327159 + DNA polymerase V subunit UmuC binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06115 PAJ_RS06120 PAJ_1107 PAJ_RS06120 1327308 1328153 + heat-shock protein Hsp31 Hsp31 stabilizes early unfolding protein intermediates under severe heat stress gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06120 PAJ_RS06125 PAJ_1108 PAJ_RS06125 1328294 1328935 + transcriptional regulator gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06125 PAJ_RS06130 PAJ_RS06130 PAJ_RS06130 1329089 1329292 + hypothetical protein gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06130 PAJ_RS06135 PAJ_RS06135 PAJ_RS06135 1329465 1329704 - hypothetical protein gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06135 PAJ_RS06140 PAJ_RS06140 PAJ_RS06140 1329939 1330208 - hypothetical protein gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06140 PAJ_RS06145 PAJ_1110 PAJ_RS06145 1330850 1331077 - hypothetical protein gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06145 PAJ_RS06150 PAJ_RS06150 PAJ_RS06150 1331109 1331342 - lipoprotein gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06150 PAJ_RS06155 PAJ_1112 PAJ_RS06155 1331573 1331992 + 5-hydroxyisourate hydrolase catalyzes the formation of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline from 5-hydroxyisourate gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06155 PAJ_RS06160 PAJ_1113 PAJ_RS06160 1332296 1332610 + hypothetical protein gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06160 PAJ_RS06165 PAJ_1114 PAJ_RS06165 1332634 1333290 + pyridoxamine 5'-phosphate oxidase catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06165 PAJ_RS06170 PAJ_1115 PAJ_RS06170 1333428 1334702 + tyrosine--tRNA ligase gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06170 PAJ_RS06175 PAJ_1116 PAJ_RS06175 1334759 1335619 + pyridoxal kinase catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06175 PAJ_RS06180 PAJ_1117 PAJ_RS06180 1335648 1336253 - glutathione S-transferase gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06180 PAJ_RS06185 PAJ_1118 tppB tppB 1336406 1337890 - dipeptide/tripeptide permease A mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06185 PAJ_RS06190 PAJ_1119 PAJ_RS06190 1338490 1339188 + hypothetical protein gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06190 PAJ_RS06195 PAJ_1120 PAJ_RS06195 1339244 1339876 - endonuclease III DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06195 PAJ_RS06200 PAJ_1121 PAJ_RS06200 1339873 1340577 - electron transport complex subunit RsxE gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06200 PAJ_RS06205 PAJ_1122 PAJ_RS06205 1340570 1341205 - electron transport complex subunit G part of membrane-bound complex hought to be involved in electron transport to nitrogen gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06205 PAJ_RS06210 PAJ_1123 PAJ_RS06210 1341206 1342264 - electron transport complex subunit D gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06210 PAJ_RS06215 PAJ_1124 PAJ_RS06215 1342265 1344709 - electron transport complex subunit RsxC part of membrane-bound complex thought to be involved in electron transport to nitrogen gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06215 PAJ_RS06220 PAJ_1125 PAJ_RS06220 1344702 1345280 - electron transport complex subunit RsxB part of membrane-bound complex thought to be involved in electron transport to nitrogen gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06220 PAJ_RS06225 PAJ_1126 PAJ_RS06225 1345280 1345861 - electron transport complex subunit A gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06225 PAJ_RS06230 PAJ_1127 PAJ_RS06230 1345985 1346428 - membrane protein gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06230 PAJ_RS06235 PAJ_1128 PAJ_RS06235 1346535 1346750 - nucleoid-associated protein YdgT%3B in E. coli%2C when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC%3B seems to play a role in optimizing the activity of oriC%3B non-essential%3B Hha protein paralog%3B in an hha mutant background%2C cnu is overexpressed and can compensate hha-induced phenotypes gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06235 PAJ_RS06240 PAJ_1129 PAJ_RS06240 1347417 1348373 + sugar ABC transporter substrate-binding protein gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06240 PAJ_RS06245 PAJ_1130 PAJ_RS06245 1348428 1349948 + sugar ABC transporter ATP-binding protein gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06245 PAJ_RS06250 PAJ_1131 PAJ_RS06250 1349941 1350957 + sugar ABC transporter permease gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06250 PAJ_RS06255 PAJ_1132 PAJ_RS06255 1350954 1351940 + sugar ABC transporter permease YjfF membrane component of a putative sugar ABC transporter system gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06255 PAJ_RS06260 PAJ_1133 PAJ_RS06260 1352467 1354047 + diguanylate cyclase gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06260 PAJ_RS06265 PAJ_1134 PAJ_RS06265 1354132 1354591 - hypothetical protein frameshifted gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06265 PAJ_RS06270 PAJ_1135 PAJ_RS06270 1354584 1355477 - transcriptional regulator gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06270 PAJ_RS06275 PAJ_1136 PAJ_RS06275 1357161 1357940 + membrane protein gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06275 PAJ_RS06280 PAJ_1137 PAJ_RS06280 1357996 1360356 + membrane protein gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06280 PAJ_RS06285 PAJ_1138 PAJ_RS06285 1360328 1361032 + hypothetical protein gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06285 PAJ_RS06290 PAJ_RS06290 PAJ_RS06290 1361084 1361332 + hypothetical protein gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06290 PAJ_RS06295 PAJ_RS06295 PAJ_RS06295 1362019 1362294 + helix-turn-helix transcriptional regulator gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06295 PAJ_RS06300 PAJ_1139 PAJ_RS06300 1362295 1363188 + N-acetylmuramoyl-L-alanine amidase gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06300 PAJ_RS06305 PAJ_1140 PAJ_RS06305 1363701 1365131 + sulfonate ABC transporter substrate-binding protein gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06305 PAJ_RS06310 PAJ_1141 PAJ_RS06310 1365221 1366168 - AraC family transcriptional regulator gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06310 PAJ_RS06315 PAJ_1142 PAJ_RS06315 1366248 1367135 + NAD-dependent dehydratase gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06315 PAJ_RS06320 PAJ_1143 PAJ_RS06320 1367714 1368820 + mechanosensitive ion channel protein MscS gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06320 PAJ_RS06325 PAJ_1144 PAJ_RS06325 1368993 1369574 + hypothetical protein gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06325 PAJ_RS06330 PAJ_1145 PAJ_RS06330 1369679 1370386 + hypothetical protein gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06330 PAJ_RS06335 PAJ_1146 PAJ_RS06335 1370493 1371320 + MBL fold metallo-hydrolase gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06335 PAJ_RS06340 PAJ_RS06340 PAJ_RS06340 1371761 1372156 - hypothetical protein gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06340 PAJ_RS06345 PAJ_1147 PAJ_RS06345 1372807 1373310 - AsnC family transcriptional regulator gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06345 PAJ_RS06350 PAJ_1148 PAJ_RS06350 1373321 1374688 - aspartate aminotransferase family protein gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06350 PAJ_RS06355 PAJ_1149 PAJ_RS06355 1374703 1375749 - hypothetical protein gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06355 PAJ_RS06360 PAJ_1150 PAJ_RS06360 1375784 1376449 - dehalogenase gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06360 PAJ_RS06365 PAJ_1151 PAJ_RS06365 1376742 1377224 + cold-shock protein gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06365 PAJ_RS06370 PAJ_1152 PAJ_RS06370 1377617 1378156 + hypothetical protein gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06370 PAJ_RS06375 PAJ_1153 PAJ_RS06375 1378245 1378835 - hypothetical protein gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06375 PAJ_RS06380 PAJ_1154 PAJ_RS06380 1378933 1379868 + hydrolase gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06380 PAJ_RS06385 PAJ_1155 PAJ_RS06385 1379970 1380668 - RNA pseudouridine synthase gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06385 PAJ_RS06390 PAJ_1156 PAJ_RS06390 1380825 1381760 - LysR family transcriptional regulator gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06390 PAJ_RS06395 PAJ_1157 PAJ_RS06395 1381854 1382576 + short-chain dehydrogenase/reductase gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06395 PAJ_RS06400 PAJ_1158 PAJ_RS06400 1382850 1383524 + hypothetical protein gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06400 PAJ_RS06405 PAJ_1159 PAJ_RS06405 1383858 1385348 - L-arabinose isomerase gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06405 PAJ_RS06410 PAJ_1160 PAJ_RS06410 1385360 1387045 - ribulokinase catalyzes the phosphorylation of ribulose to ribulose 5-phosphate gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06410 PAJ_RS06415 PAJ_1161 PAJ_RS06415 1387411 1388394 + arabinose ABC transporter substrate-binding protein with AraGH is involved in the transport of arabinose into the cell gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06415 PAJ_RS06420 PAJ_1162 araG araG 1388539 1390059 + arabinose ABC transporter ATP-binding protein Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06420 PAJ_RS06425 PAJ_1163 araH araH 1390072 1391058 + L-arabinose ABC transporter permease AraH Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06425 PAJ_RS06430 PAJ_1164 PAJ_RS06430 1391131 1392048 + DNA-binding transcriptional regulator AraC positive and negative regulator%3B regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06430 PAJ_RS06435 PAJ_1165 PAJ_RS06435 1392127 1393167 + oxidoreductase gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06435 PAJ_RS06440 PAJ_1166 PAJ_RS06440 1393211 1394206 - adenosine deaminase gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06440 PAJ_RS06445 PAJ_1167 PAJ_RS06445 1394421 1395912 - hypothetical protein frameshifted gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06445 PAJ_RS06450 PAJ_1168 PAJ_RS06450 1396045 1397220 - mannose-6-phosphate isomerase catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06450 PAJ_RS06455 PAJ_1169 fumC fumC 1397419 1398816 + class II fumarate hydratase class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06455 PAJ_RS06460 PAJ_1170 PAJ_RS06460 1398850 1399779 - DNA replication terminus site-binding protein binds to DNA replication terminator sequences to prevent passage of replication forks gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06460 PAJ_RS06465 PAJ_1171 PAJ_RS06465 1399978 1401162 + MFS transporter gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06465 PAJ_RS06470 PAJ_RS06470 PAJ_RS06470 1401350 1401843 + BadM/Rrf2 family transcriptional regulator frameshifted gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06470 PAJ_RS06475 PAJ_1172 PAJ_RS06475 1401986 1403275 - dienelactone hydrolase gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06475 PAJ_RS06480 PAJ_1173 PAJ_RS06480 1403384 1406539 - multidrug efflux RND transporter permease subunit OqxB gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06480 PAJ_RS06485 PAJ_1174 PAJ_RS06485 1406552 1407706 - MexE family multidrug efflux RND transporter periplasmic adaptor subunit gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06485 PAJ_RS06490 PAJ_1175 PAJ_RS06490 1408009 1408356 + AraC family transcriptional regulator gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06490 PAJ_RS06495 PAJ_RS06495 PAJ_RS06495 1408453 1408890 + hypothetical protein gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06495 PAJ_RS06500 PAJ_RS06500 PAJ_RS06500 1408893 1409156 + hypothetical protein gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06500 PAJ_RS06505 PAJ_1176 PAJ_RS06505 1409153 1411528 - virulence factor SrfC gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06505 PAJ_RS06510 PAJ_1177 PAJ_RS06510 1411525 1414488 - virulence factor SrfB gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06510 PAJ_RS06515 PAJ_1178 PAJ_RS06515 1414491 1415840 - hypothetical protein gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06515 PAJ_RS06520 PAJ_1179 PAJ_RS06520 1416003 1417178 - membrane protein gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06520 PAJ_RS06525 PAJ_1180 PAJ_RS06525 1417271 1417816 + XRE family transcriptional regulator gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06525 PAJ_RS06530 PAJ_1181 PAJ_RS06530 1417969 1418526 + hydrolase gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06530 PAJ_RS06535 PAJ_1182 PAJ_RS06535 1419443 1421527 - TonB-dependent receptor gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06535 PAJ_RS06540 PAJ_1183 PAJ_RS06540 1421955 1422815 + 6-phosphogluconate dehydrogenase gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06540 PAJ_RS06545 PAJ_1184 PAJ_RS06545 1422812 1423591 + AraC family transcriptional regulator internal stop gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06545 PAJ_RS06550 PAJ_1185 PAJ_RS06550 1423512 1425227 - 2-isopropylmalate synthase gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06550 PAJ_RS06555 PAJ_1186 PAJ_RS06555 1425414 1426436 + dipeptidase gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06555 PAJ_RS06560 PAJ_1187 PAJ_RS06560 1426706 1427623 + pyrroloquinoline quinone biosynthesis protein B possibly involved in transport of pyrroloquinoline quinone transport gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06560 PAJ_RS06565 PAJ_1188 PAJ_RS06565 1427627 1428382 + pyrroloquinoline quinone biosynthesis protein C Required in the synthesis of PPQ%2C but its exact function is unknown gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06565 PAJ_RS06570 PAJ_1189 PAJ_RS06570 1428385 1428663 + pyrroloquinoline quinone biosynthesis protein PqqD with PqqC converts a biosynthetic intermediate to pyrroloquinoline quinone gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06570 PAJ_RS06575 PAJ_1190 PAJ_RS06575 1428650 1429792 + pyrroloquinoline quinone biosynthesis protein PqqE gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06575 PAJ_RS06580 PAJ_1191 PAJ_RS06580 1429792 1432053 + coenzyme PQQ biosynthesis protein PqqF gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06580 PAJ_RS06585 PAJ_1192 PAJ_RS06585 1432172 1432756 + polyisoprenoid-binding protein gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06585 PAJ_RS06590 PAJ_1193 PAJ_RS06590 1433278 1434258 + permease gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06590 PAJ_RS06595 PAJ_RS06595 PAJ_RS06595 1434268 1434582 + PTS lactose transporter subunit IIB gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06595 PAJ_RS06600 PAJ_1194 PAJ_RS06600 1434575 1435942 + PTS beta-glucoside transporter subunit IIBC gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06600 PAJ_RS06605 PAJ_1195 PAJ_RS06605 1435929 1436771 + iron ABC transporter substrate-binding protein gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06605 PAJ_RS06610 PAJ_RS06610 PAJ_RS06610 1436838 1437107 + hypothetical protein gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06610 PAJ_RS06615 PAJ_1196 PAJ_RS06615 1437117 1437554 + PTS fructose transporter subunit IIA gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06615 PAJ_RS06620 PAJ_1197 PAJ_RS06620 1437551 1438192 + hypothetical protein gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06620 PAJ_RS06625 PAJ_1198 PAJ_RS06625 1438143 1438610 + thiol-disulfide oxidoreductase gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06625 PAJ_RS06630 PAJ_RS06630 PAJ_RS06630 1438726 1439133 + hypothetical protein gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06630 PAJ_RS06635 PAJ_1199 PAJ_RS06635 1439146 1440447 + sorbosone dehydrogenase gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06635 PAJ_RS06640 PAJ_1200 PAJ_RS06640 1441075 1441704 + acetyltransferase gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06640 PAJ_RS06645 PAJ_1201 PAJ_RS06645 1441758 1443224 - catalase gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06645 PAJ_RS06650 PAJ_RS06650 PAJ_RS06650 1443216 1443401 + hypothetical protein gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06650 PAJ_RS06655 PAJ_1202 PAJ_RS06655 1443546 1444526 + hypothetical protein gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06655 PAJ_RS06660 PAJ_1203 PAJ_RS06660 1444592 1445632 + ribose-binding periplasmic protein precursor RbsB gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06660 PAJ_RS06665 PAJ_1204 PAJ_RS06665 1445649 1447148 + ribose transport ATP-binding protein RbsA gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06665 PAJ_RS06670 PAJ_1205 PAJ_RS06670 1447178 1448149 + ribose ABC transporter permease gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06670 PAJ_RS06675 PAJ_1206 PAJ_RS06675 1448149 1449006 + RpiR family transcriptional regulator gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06675 PAJ_RS06680 PAJ_1207 PAJ_RS06680 1449009 1449866 + ribokinase RbsK gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06680 PAJ_RS06685 PAJ_1208 PAJ_RS06685 1449916 1450947 - NADP-dependent oxidoreductase gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06685 PAJ_RS06690 PAJ_1209 PAJ_RS06690 1451314 1451928 - undecaprenyl-diphosphatase gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06690 PAJ_RS06695 PAJ_1210 PAJ_RS06695 1452656 1454200 + methyl-accepting chemotaxis protein II Tar gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06695 PAJ_RS06700 PAJ_1211 PAJ_RS06700 1454390 1455061 - transcriptional regulator gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06700 PAJ_RS06705 PAJ_1212 PAJ_RS06705 1455284 1456054 - iron export ABC transporter permease subunit FetB gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06705 PAJ_RS06710 PAJ_1213 PAJ_RS06710 1456038 1456706 - iron ABC transporter ATP-binding protein FetA gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06710 PAJ_RS06715 PAJ_1214 PAJ_RS06715 1457349 1457954 - acetyltransferase gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06715 PAJ_RS06720 PAJ_1215 PAJ_RS06720 1458441 1458827 + hypothetical protein gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06720 PAJ_RS06725 PAJ_1216 PAJ_RS06725 1458965 1459438 - hypothetical protein gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06725 PAJ_RS06730 PAJ_1217 PAJ_RS06730 1459635 1460534 - LysR family transcriptional regulator gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06730 PAJ_RS06735 PAJ_1218 PAJ_RS06735 1460633 1461355 + oxidoreductase gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06735 PAJ_RS06740 PAJ_1219 PAJ_RS06740 1461546 1462442 - transcriptional regulator gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06740 PAJ_RS06745 PAJ_1220 PAJ_RS06745 1462817 1463500 + hypothetical protein gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06745 PAJ_RS06750 PAJ_1221 PAJ_RS06750 1463493 1463960 + membrane protein gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06750 PAJ_RS06755 PAJ_1222 PAJ_RS06755 1463978 1465081 + peptidase M20 gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06755 PAJ_RS06760 PAJ_1223 PAJ_RS06760 1465492 1465920 - arsenate reductase (glutaredoxin) gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06760 PAJ_RS06765 PAJ_1224 PAJ_RS06765 1465970 1467253 - arylsulfatase gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06765 PAJ_RS06770 PAJ_1226 PAJ_RS06770 1467344 1467697 - transcriptional regulator regulates the expression of of the arsRBC involved in resistance to arsenic gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06770 PAJ_RS06775 PAJ_1227 PAJ_RS06775 1468008 1468259 + hypothetical protein gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06775 PAJ_RS06780 PAJ_1228 PAJ_RS06780 1468544 1469353 - hypothetical protein gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06780 PAJ_RS06785 PAJ_1229 PAJ_RS06785 1469350 1470063 - hypothetical protein gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06785 PAJ_RS06790 PAJ_1230 PAJ_RS06790 1470786 1471241 - hypothetical protein gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06790 PAJ_RS06795 PAJ_1231 PAJ_RS06795 1471717 1472313 - GNAT family acetyltransferase gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06795 PAJ_RS06800 PAJ_1232 PAJ_RS06800 1472381 1472773 + glyoxalase gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06800 PAJ_RS06805 PAJ_1233 PAJ_RS06805 1472916 1473590 + hypothetical protein gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06805 PAJ_RS06810 PAJ_1234 PAJ_RS06810 1473620 1474720 - oxidoreductase gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06810 PAJ_RS06815 PAJ_RS06815 PAJ_RS06815 1475007 1475315 - hypothetical protein gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06815 PAJ_RS06820 PAJ_1235 PAJ_RS06820 1475898 1477511 + alkaline phosphatase gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06820 PAJ_RS06825 PAJ_RS06825 PAJ_RS06825 1477731 1478150 + hypothetical protein gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06825 PAJ_RS06830 PAJ_1236 PAJ_RS06830 1478154 1478714 + RNA polymerase subunit sigma-24 gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06830 PAJ_RS06835 PAJ_1237 malG malG 1478781 1479671 - maltose transporter permease with MalKFE is involved in the transport of maltose into the cell gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06835 PAJ_RS06840 PAJ_1238 malF malF 1479681 1481219 - maltose transporter membrane protein with MalKGE is involved in maltose transport into the cell gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06840 PAJ_RS06845 PAJ_1239 malE malE 1481278 1482462 - maltose ABC transporter substrate-binding protein MalE functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06845 PAJ_RS06850 PAJ_1240 PAJ_RS06850 1482830 1483939 + sugar ABC transporter ATP-binding protein with malEFG is involved in import of maltose/maltodextrin gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06850 PAJ_RS06855 PAJ_1241 lamB lamB 1483981 1485282 + maltoporin porin involved in the transport of maltose and maltodextrins gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06855 PAJ_RS06860 PAJ_1242 PAJ_RS06860 1485386 1486306 + maltose operon protein MalM gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06860 PAJ_RS06865 PAJ_1243 PAJ_RS06865 1486571 1487599 + hypothetical protein gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06865 PAJ_RS06870 PAJ_1244 PAJ_RS06870 1487571 1488584 - hypothetical protein gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06870 PAJ_RS06875 PAJ_1245 malQ malQ 1488798 1490849 - 4-alpha-glucanotransferase amylomaltase%3B acts to release glucose from maltodextrins gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06875 PAJ_RS06880 PAJ_1246 PAJ_RS06880 1490858 1493260 - maltodextrin phosphorylase gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06880 PAJ_RS06885 PAJ_1247 PAJ_RS06885 1493539 1496241 + transcriptional regulator MalT Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06885 PAJ_RS06890 PAJ_1248 PAJ_RS06890 1496282 1497511 - fosmidomycin resistance protein gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06890 PAJ_RS06895 PAJ_RS06895 PAJ_RS06895 1497623 1498060 - acetyltransferase gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06895 PAJ_RS06900 PAJ_1249 PAJ_RS06900 1498057 1499217 - hypothetical protein gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06900 PAJ_RS06905 PAJ_1250 PAJ_RS06905 1499864 1502191 + oxidoreductase gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06905 PAJ_RS06910 PAJ_1251 PAJ_RS06910 1502501 1503214 + magnesium transporter gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06910 PAJ_RS06915 PAJ_RS06915 PAJ_RS06915 1504243 1504455 + hypothetical protein gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06915 PAJ_RS06920 PAJ_RS06920 PAJ_RS06920 1504548 1504892 + hypothetical protein gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06920 PAJ_RS06925 PAJ_RS06925 PAJ_RS06925 1505435 1505698 + transposase gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06925 PAJ_RS06930 PAJ_1253 PAJ_RS06930 1505722 1506555 + transposase gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06930 PAJ_RS06935 PAJ_RS06935 PAJ_RS06935 1507027 1507877 - integrase frameshifted gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06935 PAJ_RS06940 PAJ_1255 PAJ_RS06940 1509214 1509819 + hypothetical protein gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06940 PAJ_RS06945 PAJ_RS06945 PAJ_RS06945 1509851 1510129 + hypothetical protein gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06945 PAJ_RS06950 PAJ_1256 PAJ_RS06950 1510178 1510993 + hypothetical protein gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06950 PAJ_RS06955 PAJ_RS06955 PAJ_RS06955 1511647 1511928 + hypothetical protein gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06955 PAJ_RS06960 PAJ_RS06960 PAJ_RS06960 1511932 1512213 + hypothetical protein gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06960 PAJ_RS06965 PAJ_1257 PAJ_RS06965 1512399 1517381 + hypothetical protein gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06965 PAJ_RS06970 PAJ_1258 PAJ_RS06970 1517491 1519623 + peptidase C39 gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06970 PAJ_RS06975 PAJ_1259 PAJ_RS06975 1519636 1521051 + HlyD family type I secretion periplasmic adaptor subunit gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06975 PAJ_RS06980 PAJ_1260 PAJ_RS06980 1521041 1522465 + hypothetical protein gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06980 PAJ_RS06985 PAJ_1261 PAJ_RS06985 1522764 1523300 + lipoprotein NlpC precursor gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06985 PAJ_RS06990 PAJ_RS06990 PAJ_RS06990 1524362 1524772 - hypothetical protein gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06990 PAJ_RS06995 PAJ_1262 PAJ_RS06995 1525188 1525649 - DNA mismatch repair protein MutT gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS06995 PAJ_RS07000 PAJ_1263 PAJ_RS07000 1525701 1526897 - hypothetical protein gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07000 PAJ_RS07005 PAJ_1264 PAJ_RS07005 1526902 1527921 - cobalamin biosynthesis protein CobW gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07005 PAJ_RS07010 PAJ_RS07010 PAJ_RS07010 1527945 1528229 - hypothetical protein gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07010 PAJ_RS07015 PAJ_1265 PAJ_RS07015 1528240 1528986 - 3-oxoacyl-ACP reductase gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07015 PAJ_RS07020 PAJ_1266 PAJ_RS07020 1528996 1529769 - short-chain dehydrogenase gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07020 PAJ_RS07025 PAJ_1267 PAJ_RS07025 1529779 1531149 - MFS transporter gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07025 PAJ_RS07030 PAJ_1268 PAJ_RS07030 1531184 1532059 - hypothetical protein gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07030 PAJ_RS07035 PAJ_1269 PAJ_RS07035 1532079 1533455 - amidase gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07035 PAJ_RS07040 PAJ_1270 PAJ_RS07040 1533782 1534786 + GntR family transcriptional regulator gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07040 PAJ_RS07045 PAJ_1271 PAJ_RS07045 1535151 1537031 + hypothetical protein gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07045 PAJ_RS07050 PAJ_1272 PAJ_RS07050 1537112 1537501 - enamine deaminase RidA gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07050 PAJ_RS07055 PAJ_1273 PAJ_RS07055 1537512 1538843 - D-amino-acid oxidase gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07055 PAJ_RS07060 PAJ_1274 PAJ_RS07060 1538868 1540340 - aldehyde dehydrogenase gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07060 PAJ_RS07065 PAJ_1275 PAJ_RS07065 1540371 1541501 - metal activated pyridoxal enzyme gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07065 PAJ_RS07070 PAJ_1276 PAJ_RS07070 1541594 1542502 + LysR family transcriptional regulator gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07070 PAJ_RS07075 PAJ_RS07075 PAJ_RS07075 1542539 1542937 - germin gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07075 PAJ_RS07080 PAJ_1277 PAJ_RS07080 1543161 1543724 + fasciclin gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07080 PAJ_RS07085 PAJ_1278 PAJ_RS07085 1543765 1544319 + hypothetical protein gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07085 PAJ_RS07090 PAJ_1279 PAJ_RS07090 1544316 1544963 + hypothetical protein gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07090 PAJ_RS07095 PAJ_1280 PAJ_RS07095 1545044 1546684 - methyl-accepting chemotaxis citrate transducer Tcp gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07095 PAJ_RS07100 PAJ_1281 trkD trkD 1547557 1549425 + potassium transporter Kup Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07100 PAJ_RS07105 PAJ_RS07105 PAJ_RS07105 1549867 1550262 + aldehyde-activating protein gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07105 PAJ_RS07110 PAJ_1282 PAJ_RS07110 1550325 1551440 - toxin HipA gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07110 PAJ_RS07115 PAJ_1283 PAJ_RS07115 1551440 1551679 - transcriptional regulator gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07115 PAJ_RS07120 PAJ_1284 PAJ_RS07120 1551794 1552237 + blasticidin S-acetyltransferase gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07120 PAJ_RS07125 PAJ_1285 PAJ_RS07125 1552301 1554677 - glycosyl hydrolase frameshifted gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07125 PAJ_RS07130 PAJ_1286 PAJ_RS07130 1554700 1556088 - symporter uncharacterized member of the GPH family of galactose-pentose-hexuronide transporters gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07130 PAJ_RS07135 PAJ_1287 PAJ_RS07135 1556614 1557246 + acyl-homoserine-lactone synthase gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07135 PAJ_RS07140 PAJ_1288 PAJ_RS07140 1557218 1557967 - LuxR family transcriptional regulator gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07140 PAJ_RS07145 PAJ_1289 PAJ_RS07145 1558579 1559472 + NAD(P)-dependent oxidoreductase gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07145 PAJ_RS07150 PAJ_1290 PAJ_RS07150 1559531 1560667 - class C beta-lactamase gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07150 PAJ_RS07155 PAJ_RS07155 PAJ_RS07155 1560892 1561137 - hypothetical protein gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07155 PAJ_RS07160 PAJ_1291 PAJ_RS07160 1561206 1562387 - glycosyl transferase gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07160 PAJ_RS07165 PAJ_1292 PAJ_RS07165 1562647 1563804 + monooxygenase gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07165 PAJ_RS07170 PAJ_1293 PAJ_RS07170 1563835 1565877 - dipeptidyl carboxypeptidase II gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07170 PAJ_RS07175 PAJ_1294 PAJ_RS07175 1565926 1566714 - xanthine dehydrogenase accessory protein XdhC gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07175 PAJ_RS07180 PAJ_RS07180 PAJ_RS07180 1566701 1569067 - xanthine dehydrogenase molybdopterin binding subunit gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07180 PAJ_RS07185 PAJ_1295 PAJ_RS07185 1569057 1570496 - xanthine dehydrogenase small subunit gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07185 PAJ_RS07190 PAJ_1296 PAJ_RS07190 1570493 1571821 - guanine deaminase Catalyzes the deamination of guanine gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07190 PAJ_RS07195 PAJ_1297 PAJ_RS07195 1572194 1572940 + NAD(P)-dependent oxidoreductase NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07195 PAJ_RS07200 PAJ_1298 PAJ_RS07200 1572969 1573295 - hypothetical protein gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07200 PAJ_RS07205 PAJ_1299 PAJ_RS07205 1573428 1573751 + hypothetical protein gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07205 PAJ_RS07210 PAJ_1300 PAJ_RS07210 1573797 1574093 + hypothetical protein gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07210 PAJ_RS07215 PAJ_1301 PAJ_RS07215 1574179 1575642 - transporter gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07215 PAJ_RS07220 PAJ_1302 PAJ_RS07220 1576020 1576736 + glycine/betaine ABC transporter permease gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07220 PAJ_RS07225 PAJ_RS07225 PAJ_RS07225 1576753 1577665 + glycine/betaine ABC transporter substrate-binding protein frameshifted gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07225 PAJ_RS07230 PAJ_1304 PAJ_RS07230 1577675 1578322 + choline ABC transporter permease gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07230 PAJ_RS07235 PAJ_1306 PAJ_RS07235 1578322 1579458 + glycine/betaine ABC transporter ATP-binding protein gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07235 PAJ_RS07240 PAJ_1307 PAJ_RS07240 1579583 1580281 - dethiobiotin synthase DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07240 PAJ_RS07245 PAJ_1308 PAJ_RS07245 1580397 1581614 - transcriptional regulator mlc%2C controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems%2C regulates genes involved in the uptake of sugars gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07245 PAJ_RS07250 PAJ_1309 PAJ_RS07250 1581748 1582635 - LysR family transcriptional regulator gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07250 PAJ_RS07255 PAJ_1310 PAJ_RS07255 1582730 1583977 + membrane protein gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07255 PAJ_RS07260 PAJ_RS07260 PAJ_RS07260 1584143 1584400 + hypothetical protein gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07260 PAJ_RS07265 PAJ_1311 PAJ_RS07265 1584603 1585148 + cytochrome b561 CybB B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07265 PAJ_RS07270 PAJ_1312 PAJ_RS07270 1585314 1586498 + sugar transporter gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07270 PAJ_RS07275 PAJ_RS07275 PAJ_RS07275 1586955 1587278 + hypothetical protein gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07275 PAJ_RS07280 PAJ_1313 PAJ_RS07280 1587405 1587671 - hypothetical protein gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07280 PAJ_RS07285 PAJ_1314 PAJ_RS07285 1587774 1589369 - peptide ABC transporter substrate-binding protein DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07285 PAJ_RS07290 PAJ_1315 PAJ_RS07290 1589497 1590723 + peptidase T catalyzes the release of the N-terminal amino acid from a tripeptide gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07290 PAJ_RS07295 PAJ_1316 PAJ_RS07295 1590780 1592450 - methyl-accepting chemotaxis protein gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07295 PAJ_RS07300 PAJ_1317 PAJ_RS07300 1592640 1594160 - carboxylesterase gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07300 PAJ_RS07305 PAJ_RS07305 PAJ_RS07305 1594333 1594767 + hypothetical protein gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07305 PAJ_RS07310 PAJ_1318 PAJ_RS07310 1594801 1596141 - DUF1338 domain-containing protein gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07310 PAJ_RS07315 PAJ_1319 PAJ_RS07315 1596209 1597549 - 4-hydroxybenzoate transporter gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07315 PAJ_RS07320 PAJ_1320 PAJ_RS07320 1597868 1598788 + LysR family transcriptional regulator gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07320 PAJ_RS07325 PAJ_1321 PAJ_RS07325 1598785 1599351 - DNA endonuclease SmrA gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07325 PAJ_RS07330 PAJ_1322 PAJ_RS07330 1599670 1600410 + fumarate/nitrate reduction transcriptional regulator Global transcription factor that controls the expression of over 100 target genes in response to anoxia gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07330 PAJ_RS07335 PAJ_1323 PAJ_RS07335 1600530 1601483 + universal stress protein E with UspC and UspD is involved in resistance to UV irradiation gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07335 PAJ_RS07340 PAJ_1324 pntB pntB 1601532 1602920 - NAD(P) transhydrogenase subunit beta catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07340 PAJ_RS07345 PAJ_1325 pntA pntA 1602924 1604456 - NAD(P) transhydrogenase subunit alpha forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07345 PAJ_RS07350 PAJ_1326 PAJ_RS07350 1604990 1605943 + hypothetical protein gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07350 PAJ_RS07355 PAJ_1327 PAJ_RS07355 1606154 1607542 + arginine:ornithine antiporter gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07355 PAJ_RS07360 PAJ_RS07360 PAJ_RS07360 1607539 1607949 - hypothetical protein gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07360 PAJ_RS07365 PAJ_1328 PAJ_RS07365 1608124 1608849 + DNA-binding response regulator response regulator in two-component regulatory system with RstB gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07365 PAJ_RS07370 PAJ_1329 PAJ_RS07370 1608846 1610147 + two-component sensor histidine kinase gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07370 PAJ_RS07375 PAJ_1330 PAJ_RS07375 1610166 1611653 + peptidase M32 gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07375 PAJ_RS07380 PAJ_1331 PAJ_RS07380 1611821 1612318 + acid-shock protein gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07380 PAJ_RS07385 PAJ_1332 PAJ_RS07385 1612597 1613406 + serine protease gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07385 PAJ_RS07390 PAJ_1333 PAJ_RS07390 1613496 1617395 - ATP-dependent helicase involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07390 PAJ_RS07395 PAJ_1334 PAJ_RS07395 1617643 1618242 + azoreductase FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07395 PAJ_RS07400 PAJ_1335 PAJ_RS07400 1618314 1618634 - hypothetical protein gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07400 PAJ_RS07405 PAJ_RS07405 PAJ_RS07405 1618646 1618834 - YnbE family lipoprotein gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07405 PAJ_RS07410 PAJ_1336 PAJ_RS07410 1618831 1621464 - hypothetical protein gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07410 PAJ_RS07415 PAJ_1337 PAJ_RS07415 1621607 1622599 + lactate dehydrogenase fermentative%3B catalyzes the formationof pyruvate from lactate gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07415 PAJ_RS07420 PAJ_1338 PAJ_RS07420 1622633 1622908 - hypothetical protein gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07420 PAJ_RS07425 PAJ_1339 PAJ_RS07425 1623091 1623747 + methyltransferase gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07425 PAJ_RS07430 PAJ_1340 PAJ_RS07430 1624188 1625123 + tRNA 2-thiocytidine(32) synthetase TtcA TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs%3B forms 2-thiocytidine (s(2)C) gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07430 PAJ_RS07435 PAJ_1341 zntB zntB 1625597 1626580 - zinc transporter gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07435 PAJ_RS07440 PAJ_1342 PAJ_RS07440 1626698 1628317 - peptide ABC transporter substrate-binding protein is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07440 PAJ_RS07445 PAJ_1343 PAJ_RS07445 1628470 1629201 + murein peptide amidase A gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07445 PAJ_RS07450 PAJ_1344 PAJ_RS07450 1629152 1630135 - dipeptide epimerase catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07450 PAJ_RS07455 PAJ_1345 tpx tpx 1630286 1630789 + 2-Cys peroxiredoxin antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07455 PAJ_RS07460 PAJ_1346 PAJ_RS07460 1630827 1632392 - DNA-binding transcriptional regulator TyrR regulates genes involved in the biosynthesis and transport of aromatic amino acids gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07460 PAJ_RS07465 PAJ_1347 PAJ_RS07465 1632645 1633712 - hypothetical protein gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07465 PAJ_RS07470 PAJ_1348 PAJ_RS07470 1633709 1635106 - hypothetical protein gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07470 PAJ_RS07475 PAJ_1349 PAJ_RS07475 1635087 1635335 - PspD gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07475 PAJ_RS07480 PAJ_1350 PAJ_RS07480 1635393 1635743 - DNA-binding transcriptional activator PspC with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07480 PAJ_RS07485 PAJ_1351 pspB pspB 1635740 1635967 - phage shock protein B DNA-binding transcriptional regulator%3B acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07485 PAJ_RS07490 PAJ_1352 PAJ_RS07490 1636005 1636670 - phage shock protein PspA involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07490 PAJ_RS07495 PAJ_1353 pspF pspF 1636833 1637846 + phage shock protein operon transcriptional activator transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07495 PAJ_RS07500 PAJ_RS07500 PAJ_RS07500 1638150 1638602 - hypothetical protein gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07500 PAJ_RS07505 PAJ_1354 PAJ_RS07505 1638794 1640422 + peptide ABC transporter substrate-binding protein SapA gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07505 PAJ_RS07510 PAJ_1355 PAJ_RS07510 1640423 1641388 + peptide ABC transporter permease gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07510 PAJ_RS07515 PAJ_1356 PAJ_RS07515 1641375 1642265 + peptide ABC transporter permease gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07515 PAJ_RS07520 PAJ_1357 PAJ_RS07520 1642265 1643260 + peptide ABC transporter ATP-binding protein involved in resistance to antimibial peptides gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07520 PAJ_RS07525 PAJ_1358 PAJ_RS07525 1643262 1644065 + peptide ABC transporter ATP-binding protein gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07525 PAJ_RS07530 PAJ_1359 PAJ_RS07530 1644207 1644995 + enoyl-[acyl-carrier-protein] reductase Catalyzes a key regulatory step in fatty acid biosynthesis gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07530 PAJ_RS07535 PAJ_1360 PAJ_RS07535 1645185 1646306 + oxidoreductase gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07535 PAJ_RS07540 PAJ_1361 PAJ_RS07540 1646303 1647199 - LysR family transcriptional regulator gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07540 PAJ_RS07545 PAJ_1362 PAJ_RS07545 1647865 1649451 - MalX gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07545 PAJ_RS07550 PAJ_1363 PAJ_RS07550 1649702 1652005 + hypothetical protein gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07550 PAJ_RS07555 PAJ_1364 PAJ_RS07555 1652117 1654051 + exoribonuclease II Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07555 PAJ_RS07560 PAJ_1365 PAJ_RS07560 1654242 1656308 + carbon starvation protein A gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07560 PAJ_RS07565 PAJ_1366 PAJ_RS07565 1656301 1656591 + hypothetical protein gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07565 PAJ_RS07570 PAJ_1367 PAJ_RS07570 1656748 1658733 + GGDEF domain-containing protein c-di-GMP phosphodiesterase%3B probably degrades signalling molecule c-di-GMP gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07570 PAJ_RS07575 PAJ_1368 PAJ_RS07575 1658738 1659604 - enoyl-CoA hydratase regulator of pathogenicity factor RpfF%3B involved in synthesis of a diffusible signal factor involved in the regulation of extracellular enzymes gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07575 PAJ_RS07580 PAJ_1369 araD araD 1659876 1660574 - L-ribulose-5-phosphate 4-epimerase catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07580 PAJ_RS07585 PAJ_RS07585 PAJ_RS07585 1660632 1660838 + hypothetical protein gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07585 PAJ_RS07590 PAJ_1370 PAJ_RS07590 1660920 1661135 + lipoprotein gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07590 PAJ_RS07595 PAJ_1371 PAJ_RS07595 1661218 1661541 - translation initiation factor Sui1 involved in start site selection during the initiation of translation gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07595 PAJ_RS07600 PAJ_1372 PAJ_RS07600 1661538 1662251 - orotidine 5'-phosphate decarboxylase gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07600 PAJ_RS07605 PAJ_1373 PAJ_RS07605 1662446 1663615 - lipopolysaccharide assembly protein LapB gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07605 PAJ_RS07610 PAJ_1374 PAJ_RS07610 1663622 1663933 - membrane protein gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07610 PAJ_RS07615 PAJ_1375 PAJ_RS07615 1664063 1664827 - phosphatidylglycerophosphatase B gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07615 PAJ_RS07620 PAJ_1376 ribA ribA 1665056 1665649 + GTP cyclohydrolase II catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07620 PAJ_RS07625 PAJ_1377 PAJ_RS07625 1665681 1668362 - aconitate hydratase Catalyzes the conversion of citrate to isocitrate gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07625 PAJ_RS07630 PAJ_RS07630 PAJ_RS07630 1668763 1668942 - hypothetical protein gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07630 PAJ_RS07635 PAJ_1378 cysB cysB 1669600 1670574 - LysR family transcriptional regulator CysB LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07635 PAJ_RS07640 PAJ_1379 PAJ_RS07640 1670765 1673362 - DNA topoisomerase I catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07640 PAJ_RS07645 PAJ_1380 PAJ_RS07645 1673731 1673979 + hypothetical protein gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07645 PAJ_RS07650 PAJ_1381 PAJ_RS07650 1674010 1675056 - protease SohB multicopy suppressor of htrA(degP) gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07650 PAJ_RS07655 PAJ_1382 PAJ_RS07655 1675230 1675991 + YciK family oxidoreductase gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07655 PAJ_RS07660 PAJ_1383 PAJ_RS07660 1675991 1676581 + cob(I)yrinic acid a%2Cc-diamide adenosyltransferase catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07660 PAJ_RS07665 PAJ_1384 PAJ_RS07665 1677111 1678424 + citrate transporter gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07665 PAJ_RS07670 PAJ_1385 PAJ_RS07670 1678517 1679401 - 23S rRNA pseudouridylate synthase B catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07670 PAJ_RS07675 PAJ_RS07675 PAJ_RS07675 1679898 1680098 - hypothetical protein gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07675 PAJ_RS07680 PAJ_1386 PAJ_RS07680 1680565 1681206 + hypothetical protein gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07680 PAJ_RS07685 PAJ_1387 PAJ_RS07685 1681212 1681832 - hypothetical protein gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07685 PAJ_RS07690 PAJ_1388 PAJ_RS07690 1681842 1682729 - phosphatase gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07690 PAJ_RS07695 PAJ_1389 PAJ_RS07695 1683012 1684574 + anthranilate synthase component I with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07695 PAJ_RS07700 PAJ_RS07700 PAJ_RS07700 1684574 1685155 + glutamine amidotransferase gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07700 PAJ_RS07705 PAJ_1390 PAJ_RS07705 1685169 1686167 + anthranilate phosphoribosyltransferase gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07705 PAJ_RS07710 PAJ_1391 PAJ_RS07710 1686170 1687531 + bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07710 PAJ_RS07715 PAJ_1392 PAJ_RS07715 1687579 1688769 + tryptophan synthase subunit beta catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07715 PAJ_RS07720 PAJ_1393 PAJ_RS07720 1688769 1689572 + tryptophan synthase subunit alpha gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07720 PAJ_RS07725 PAJ_1394 PAJ_RS07725 1689717 1690031 + osmotically inducible protein Y OsmY gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07725 PAJ_RS07730 PAJ_1395 PAJ_RS07730 1690078 1690710 - outer membrane protein OmpW receptor for colicin S4 gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07730 PAJ_RS07735 PAJ_1396 PAJ_RS07735 1690962 1691378 + hypothetical protein gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07735 PAJ_RS07740 PAJ_1397 PAJ_RS07740 1691406 1692140 + hypothetical protein gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07740 PAJ_RS07745 PAJ_1398 PAJ_RS07745 1692197 1692736 + intracellular septation protein A Involved in cell division%3B probably involved in intracellular septation gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07745 PAJ_RS07750 PAJ_1399 PAJ_RS07750 1692792 1693214 + acyl-CoA thioesterase gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07750 PAJ_RS07755 PAJ_1400 PAJ_RS07755 1693330 1694088 - TonB system transport protein TonB membrane spanning protein in TonB-ExbB-ExbD complex%3B transduces proton motive force of the cytoplasmic membrane to outer membrane transporters%3B involved in the transport of ron-siderophore complexes%2C vitamin B12 and colicins gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07755 PAJ_RS07760 PAJ_1401 PAJ_RS07760 1694286 1694582 + hypothetical protein unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07760 PAJ_RS07765 PAJ_RS07765 PAJ_RS07765 1694856 1695065 - hypothetical protein gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07765 PAJ_RS07770 PAJ_1402 cls cls 1695192 1696652 + cardiolipin synthase A catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol) gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07770 PAJ_RS07775 PAJ_1403 PAJ_RS07775 1696697 1697020 + dsDNA-mimic protein highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07775 PAJ_RS07780 PAJ_1404 PAJ_RS07780 1697067 1698068 - oligopeptide ABC transporter ATP-binding protein OppF with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07780 PAJ_RS07785 PAJ_1405 oppD oppD 1698065 1699078 - oligopeptide ABC transporter ATP-binding protein OppD gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07785 PAJ_RS07790 PAJ_1406 PAJ_RS07790 1699090 1699998 - peptide ABC transporter permease with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07790 PAJ_RS07795 PAJ_1407 oppB oppB 1700013 1700933 - peptide ABC transporter permease gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07795 PAJ_RS07800 PAJ_1408 PAJ_RS07800 1701021 1702661 - oligopeptide ABC transporter substrate-binding protein OppA is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07800 PAJ_RS07805 PAJ_1409 PAJ_RS07805 1702819 1704435 - peptide ABC transporter substrate-binding protein is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07805 PAJ_RS07810 PAJ_1410 PAJ_RS07810 1705018 1705665 - membrane protein gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07810 PAJ_RS07815 PAJ_1411 PAJ_RS07815 1706103 1708790 + bifunctional acetaldehyde-CoA/alcohol dehydrogenase gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07815 PAJ_RS07820 PAJ_1412 PAJ_RS07820 1709023 1709694 - thymidine kinase catalyzes the formation of thymidine 5'-phosphate from thymidine gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07820 PAJ_RS07825 PAJ_1413 PAJ_RS07825 1710063 1710470 + DNA-binding protein gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07825 PAJ_RS07830 PAJ_1414 PAJ_RS07830 1710566 1711573 - hypothetical protein gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07830 PAJ_RS07835 PAJ_1415 PAJ_RS07835 1711588 1712928 - UDP-glucose 6-dehydrogenase gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07835 PAJ_RS07840 PAJ_1416 PAJ_RS07840 1712950 1713858 - UTP--glucose-1-phosphate uridylyltransferase together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07840 PAJ_RS07845 PAJ_1417 PAJ_RS07845 1714054 1715070 - transcriptional regulator gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07845 PAJ_RS07850 PAJ_1418 PAJ_RS07850 1715170 1716081 - patatin family protein gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07850 PAJ_RS07855 PAJ_1419 PAJ_RS07855 1716179 1716634 + hypothetical protein gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07855 PAJ_RS07860 PAJ_1420 PAJ_RS07860 1716691 1717539 + formyltetrahydrofolate deformylase gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07860 PAJ_RS07865 PAJ_t0023 PAJ_RS07865 1717684 1717768 + tRNA-Tyr tRNA gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07865 PAJ_RS07870 PAJ_t0024 PAJ_RS07870 1717804 1717888 + tRNA-Tyr tRNA gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07870 PAJ_RS07875 PAJ_RS07875 PAJ_RS07875 1717930 1718057 + RtT sRNA rtT sRNA%2C processed from tyrT transcript ncRNA gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07875 PAJ_RS07880 PAJ_RS07880 PAJ_RS07880 1718099 1718226 + RtT sRNA rtT sRNA%2C processed from tyrT transcript ncRNA gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07880 PAJ_RS07885 PAJ_RS07885 PAJ_RS07885 1718268 1718380 + RtT sRNA rtT sRNA%2C processed from tyrT transcript ncRNA gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07885 PAJ_RS07890 PAJ_1422 PAJ_RS07890 1718493 1719299 + exodeoxyribonuclease III gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07890 PAJ_RS07895 PAJ_1423 PAJ_RS07895 1719335 1719631 - hypothetical protein gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07895 PAJ_RS07900 PAJ_1424 PAJ_RS07900 1719631 1721547 - DNA topoisomerase III decatenates replicating daughter chromosomes gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07900 PAJ_RS07905 PAJ_1425 PAJ_RS07905 1721797 1722348 - NAD(P)H nitroreductase gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07905 PAJ_RS07910 PAJ_1426 PAJ_RS07910 1722522 1724384 + signal peptide peptidase SppA SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07910 PAJ_RS07915 PAJ_1427 ansA ansA 1724470 1725483 + L-asparaginase 1 converts asparagine to aspartate and ammonia gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07915 PAJ_RS07920 PAJ_1428 PAJ_RS07920 1725500 1726108 + nicotinamidase/pyrazinamidase gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07920 PAJ_RS07925 PAJ_1429 PAJ_RS07925 1726192 1726473 - transcriptional regulator gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07925 PAJ_RS07930 PAJ_1430 PAJ_RS07930 1726476 1726886 - peptide-methionine (R)-S-oxide reductase gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07930 PAJ_RS07935 PAJ_1431 PAJ_RS07935 1727227 1728225 + glyceraldehyde-3-phosphate dehydrogenase gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07935 PAJ_RS07940 PAJ_1432 PAJ_RS07940 1728298 1729176 + D-hexose-6-phosphate mutarotase gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07940 PAJ_RS07945 PAJ_1433 PAJ_RS07945 1729185 1730036 - hypothetical protein gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07945 PAJ_RS07950 PAJ_1434 PAJ_RS07950 1730107 1730856 - MltA-interacting protein MipA scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07950 PAJ_RS07955 PAJ_1435 PAJ_RS07955 1731277 1733211 + serine protein kinase PrkA gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07955 PAJ_RS07960 PAJ_1436 PAJ_RS07960 1733304 1734578 + hypothetical protein gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07960 PAJ_RS07965 PAJ_1437 cvrA cvrA 1734824 1736551 + K+/H+ antiporter the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07965 PAJ_RS07970 PAJ_1438 PAJ_RS07970 1736628 1736861 + hypothetical protein gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07970 PAJ_RS07975 PAJ_1439 PAJ_RS07975 1737238 1738704 + undecaprenyl-phosphate galactose phosphotransferase WbaP gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07975 PAJ_RS07980 PAJ_1440 PAJ_RS07980 1738826 1740019 + Bcr/CflA family drug resistance efflux transporter gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07980 PAJ_RS07985 PAJ_1441 PAJ_RS07985 1740012 1741082 - alanine racemase converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07985 PAJ_RS07990 PAJ_1442 PAJ_RS07990 1741101 1742402 - D-amino acid dehydrogenase small subunit catalyzes the oxidative deamination of D-amino acids gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07990 PAJ_RS07995 PAJ_1443 PAJ_RS07995 1742906 1744441 + SpoVR family protein gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS07995 PAJ_RS08000 PAJ_1444 PAJ_RS08000 1744481 1745200 - fatty acid metabolism regulator Multifunctional regulator of fatty acid metabolism gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08000 PAJ_RS08005 PAJ_1445 PAJ_RS08005 1745581 1746111 + disulfide bond formation protein B disulfide oxidoreductase%3B integral membrane protein%3B required for perioplasmic disulfide bond formation%3B oxidizes DsbA protein gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08005 PAJ_RS08010 PAJ_1446 PAJ_RS08010 1746153 1746599 - hypothetical protein gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08010 PAJ_RS08015 PAJ_1447 PAJ_RS08015 1746663 1747322 - isomerase/hydrolase gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08015 PAJ_RS08020 PAJ_1448 PAJ_RS08020 1747618 1747893 - hypothetical protein gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08020 PAJ_RS08025 PAJ_1449 minC minC 1748048 1748746 + septum formation inhibitor blocks the formation of polar Z-ring septums gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08025 PAJ_RS08030 PAJ_1450 PAJ_RS08030 1748780 1749592 + septum site-determining protein MinD ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08030 PAJ_RS08035 PAJ_1451 minE minE 1749596 1749865 + cell division topological specificity factor MinE works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08035 PAJ_RS08040 PAJ_1452 PAJ_RS08040 1749917 1751038 - ribonuclease D gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08040 PAJ_RS08045 PAJ_1453 PAJ_RS08045 1751138 1752847 - long-chain-fatty-acid--CoA ligase Activates fatty acids by binding to coenzyme A gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08045 PAJ_RS08050 PAJ_1454 PAJ_RS08050 1753019 1753612 - membrane protein gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08050 PAJ_RS08055 PAJ_1455 PAJ_RS08055 1753673 1754371 - tRNA N6-adenosine(37)-N6-threonylcarbamoyltransferase complex dimerization subunit TsaB gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08055 PAJ_RS08060 PAJ_1456 PAJ_RS08060 1754417 1756327 - ATP-dependent helicase gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08060 PAJ_RS08065 PAJ_1457 PAJ_RS08065 1756759 1757103 + hypothetical protein gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08065 PAJ_RS08070 PAJ_1458 PAJ_RS08070 1757119 1757304 - hypothetical protein gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08070 PAJ_RS08075 PAJ_1459 pabB pabB 1757414 1758772 + aminodeoxychorismate synthase component I para-aminobenzoate synthase component 1%3B catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08075 PAJ_RS08080 PAJ_1460 PAJ_RS08080 1758773 1759336 + coenzyme A pyrophosphatase gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08080 PAJ_RS08085 PAJ_1461 PAJ_RS08085 1759523 1760887 + L-serine ammonia-lyase catalyzes the formation of pyruvate from serine gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08085 PAJ_RS08090 PAJ_1462 PAJ_RS08090 1761101 1762663 + diguanylate phosphodiesterase gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08090 PAJ_RS08095 PAJ_1463 PAJ_RS08095 1762745 1764313 - hypothetical protein gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08095 PAJ_RS08100 PAJ_1464 PAJ_RS08100 1764815 1765789 + PTS mannose transporter subunit EIIAB catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08100 PAJ_RS08105 PAJ_1465 PAJ_RS08105 1765834 1766634 + PTS mannose/fructose/sorbose transporter subunit IIC catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08105 PAJ_RS08110 PAJ_1466 PAJ_RS08110 1766650 1767495 + PTS mannose transporter subunit IID hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08110 PAJ_RS08115 PAJ_1467 PAJ_RS08115 1767585 1768043 + hypothetical protein gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08115 PAJ_RS08120 PAJ_1468 rrmA rrmA 1768040 1768849 - 23S rRNA (guanine(745)-N(1))-methyltransferase methylates the guanosine in position 745 of 23S rRNA%3B required for translation and cell growth gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08120 PAJ_RS08125 PAJ_RS08125 PAJ_RS08125 1768987 1769196 - cold-shock protein CspC gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08125 PAJ_RS08130 PAJ_RS08130 PAJ_RS08130 1769881 1770886 - MBL fold metallo-hydrolase frameshifted gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08130 PAJ_RS08135 PAJ_1470 PAJ_RS08135 1770905 1771177 - hypothetical protein gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08135 PAJ_RS08140 PAJ_RS08140 PAJ_RS08140 1771399 1771635 + membrane protein gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08140 PAJ_RS08145 PAJ_1471 PAJ_RS08145 1771666 1772460 - DNA-binding transcriptional regulator KdgR regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08145 PAJ_RS08150 PAJ_1472 PAJ_RS08150 1772646 1774007 + multidrug MFS transporter gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08150 PAJ_RS08155 PAJ_1473 PAJ_RS08155 1774055 1774936 - zinc metalloprotease HtpX metalloprotease gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08155 PAJ_RS08160 PAJ_1474 PAJ_RS08160 1775187 1777232 - tail-specific protease Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3 gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08160 PAJ_RS08165 PAJ_1475 PAJ_RS08165 1777252 1777953 - RNA chaperone ProQ affects solute and DNA transport through an unknown mechanism gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08165 PAJ_RS08170 PAJ_1476 PAJ_RS08170 1778050 1778550 - hypothetical protein gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08170 PAJ_RS08175 PAJ_1477 PAJ_RS08175 1778762 1780006 + membrane protein gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08175 PAJ_RS08180 PAJ_1478 PAJ_RS08180 1779975 1782614 + hypothetical protein gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08180 PAJ_RS08185 PAJ_1479 yebU yebU 1782653 1784119 + 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08185 PAJ_RS08190 PAJ_RS08190 PAJ_RS08190 1784267 1784485 - hypothetical protein gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08190 PAJ_RS08195 PAJ_1480 PAJ_RS08195 1784582 1785949 - MFS transporter gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08195 PAJ_RS08200 PAJ_1481 PAJ_RS08200 1786081 1788111 - high-affinity choline transporter BetT proton-motive-force-driven choline transporter gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08200 PAJ_RS08205 PAJ_1482 PAJ_RS08205 1788368 1788961 + transcriptional regulator BetI HTH-type%3B bet1%3B Repressor involved in choline regulation of the bet genes gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08205 PAJ_RS08210 PAJ_1483 PAJ_RS08210 1788979 1790451 + betaine-aldehyde dehydrogenase gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08210 PAJ_RS08215 PAJ_1484 PAJ_RS08215 1790475 1792157 + choline dehydrogenase catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08215 PAJ_RS08220 PAJ_1485 PAJ_RS08220 1792556 1792906 + multidrug transporter with MdtI is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08220 PAJ_RS08225 PAJ_1486 PAJ_RS08225 1792893 1793222 + multidrug transporter with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08225 PAJ_RS08230 PAJ_RS08230 PAJ_RS08230 1793257 1793670 - GNAT family N-acetyltransferase gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08230 PAJ_RS08235 PAJ_1487 PAJ_RS08235 1793753 1794670 + LysR family transcriptional regulator gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08235 PAJ_RS08240 PAJ_1488 PAJ_RS08240 1794708 1795454 - short-chain dehydrogenase DltE gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08240 PAJ_RS08245 PAJ_1489 PAJ_RS08245 1795636 1796771 + acyltransferase frameshifted gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08245 PAJ_RS08250 PAJ_RS08250 PAJ_RS08250 1796810 1797004 - hypothetical protein gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08250 PAJ_RS08255 PAJ_1490 PAJ_RS08255 1797555 1799099 + methyl-accepting chemotaxis protein gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08255 PAJ_RS08260 PAJ_1491 PAJ_RS08260 1799138 1799611 - MEKHLA domain-containing protein gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08260 PAJ_RS08265 PAJ_1492 PAJ_RS08265 1799884 1801206 - 6-phospho-alpha-glucosidase gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08265 PAJ_RS08270 PAJ_1493 PAJ_RS08270 1801203 1802825 - PTS alpha-glucoside transporter subunit IIBC involved in the phosphorylation and transport of sugars across the cell membrane%3B protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel for the sugar uptake gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08270 PAJ_RS08275 PAJ_1494 PAJ_RS08275 1803105 1803809 + GntR family transcriptional regulator gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08275 PAJ_RS08280 PAJ_1495 PAJ_RS08280 1804299 1805843 + methyl-accepting chemotaxis citrate transducer Tcp gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08280 PAJ_RS08285 PAJ_1496 PAJ_RS08285 1806196 1806543 - hypothetical protein gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08285 PAJ_RS08290 PAJ_1497 PAJ_RS08290 1806571 1807398 - copper resistance protein CopD gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08290 PAJ_RS08295 PAJ_1498 PAJ_RS08295 1807451 1807825 - hypothetical protein gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08295 PAJ_RS08300 PAJ_1499 PAJ_RS08300 1807976 1808206 + DNA polymerase III subunit theta gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08300 PAJ_RS08305 PAJ_1500 PAJ_RS08305 1808209 1808877 + DNA polymerase III subunit epsilon 3'-5' exonuclease activity on single or double-strand DNA gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08305 PAJ_RS08310 PAJ_1501 PAJ_RS08310 1808861 1810933 - oligopeptidase B PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08310 PAJ_RS08315 PAJ_1502 PAJ_RS08315 1811050 1811694 - membrane protein gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08315 PAJ_RS08320 PAJ_1503 PAJ_RS08320 1811865 1813043 + phosphoribosylglycinamide formyltransferase 2 gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08320 PAJ_RS08325 PAJ_1504 PAJ_RS08325 1813098 1813736 - keto-deoxy-phosphogluconate aldolase catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08325 PAJ_RS08330 PAJ_1505 PAJ_RS08330 1813923 1815398 - glucose-6-phosphate dehydrogenase catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08330 PAJ_RS08335 PAJ_1506 PAJ_RS08335 1815769 1816632 + transcriptional regulator HexR Represses the expression of the zwf%2C eda%2C glp and gap gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08335 PAJ_RS08340 PAJ_1507 PAJ_RS08340 1816927 1818369 + pyruvate kinase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08340 PAJ_RS08345 PAJ_1508 PAJ_RS08345 1818455 1819687 + multidrug transporter MdfA gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08345 PAJ_RS08350 PAJ_1509 PAJ_RS08350 1819717 1820691 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase Transfers myristate or laurate%2C activated on ACP%2C to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08350 PAJ_RS08355 PAJ_1510 PAJ_RS08355 1820805 1822136 - murein DD-endopeptidase MepM gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08355 PAJ_RS08360 PAJ_1511 znuA znuA 1822151 1823098 - zinc ABC transporter substrate-binding protein involved in transport of zinc(II) with ZnuA and C gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08360 PAJ_RS08365 PAJ_1512 znuC znuC 1823176 1823931 + zinc ABC transporter ATP-binding protein ZnuC involved in transport of zinc(II) with ZnuA and C gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08365 PAJ_RS08370 PAJ_1513 znuB znuB 1823928 1824713 + zinc ABC transporter permease involved in transport of zinc(II) with ZnuA and C gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08370 PAJ_RS08375 PAJ_1514 ruvB ruvB 1824714 1825719 - ATP-dependent DNA helicase RuvB promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration%3B frameshifted gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08375 PAJ_RS08380 PAJ_1515 ruvA ruvA 1825728 1826342 - Holliday junction ATP-dependent DNA helicase RuvA plays an essential role in ATP-dependent branch migration of the Holliday junction gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08380 PAJ_RS08385 PAJ_1516 ruvC ruvC 1826439 1826966 - crossover junction endodeoxyribonuclease RuvC endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08385 PAJ_RS08390 PAJ_1517 PAJ_RS08390 1827003 1827746 - hypothetical protein gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08390 PAJ_RS08395 PAJ_1519 nudB nudB 1827986 1828417 - NUDIX pyrophosphatase catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08395 PAJ_RS08400 PAJ_1520 PAJ_RS08400 1828417 1830195 - aspartate--tRNA ligase gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08400 PAJ_RS08405 PAJ_1521 PAJ_RS08405 1830416 1831237 + hypothetical protein gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08405 PAJ_RS08410 PAJ_1522 PAJ_RS08410 1831292 1831687 + membrane protein gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08410 PAJ_RS08415 PAJ_1523 PAJ_RS08415 1831767 1832495 + tRNA (uridine-5-oxyacetic acid methyl ester)(34) synthase TrmP catalyzes the conversion of 5-methoxyuridine to uridine-5-oxyacetic acid in tRNA gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08415 PAJ_RS08420 PAJ_1524 PAJ_RS08420 1832492 1833460 + tRNA 5-methoxyuridine(34) synthase CmoB catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08420 PAJ_RS08425 PAJ_1525 PAJ_RS08425 1833464 1834087 - threonine transporter RhtB gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08425 PAJ_RS08430 PAJ_1526 PAJ_RS08430 1834234 1835328 + glycerol dehydrogenase gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08430 PAJ_RS08435 PAJ_1527 PAJ_RS08435 1835332 1836177 - hypothetical protein gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08435 PAJ_RS08440 PAJ_1528 PAJ_RS08440 1836420 1837172 - copper homeostasis protein CutC gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08440 PAJ_RS08445 PAJ_1529 PAJ_RS08445 1837259 1838401 + aspartate aminotransferase gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08445 PAJ_RS08450 PAJ_1530 PAJ_RS08450 1838398 1838958 - hypothetical protein gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08450 PAJ_RS08455 PAJ_1531 PAJ_RS08455 1839588 1841318 + arginine--tRNA ligase gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08455 PAJ_RS08460 PAJ_RS08460 PAJ_RS08460 1841324 1841506 - hypothetical protein gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08460 PAJ_RS08465 PAJ_1532 PAJ_RS08465 1841623 1842318 + aquaporin porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08465 PAJ_RS08470 PAJ_1533 PAJ_RS08470 1842414 1842806 - flagellar protein flhE gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08470 PAJ_RS08475 PAJ_1534 PAJ_RS08475 1842803 1844896 - flagellar biosynthesis protein FlhA gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08475 PAJ_RS08480 PAJ_1535 flhB flhB 1844889 1846040 - flagellar biosynthesis protein FlhB membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08480 PAJ_RS08485 PAJ_1536 PAJ_RS08485 1846243 1846884 - protein phosphatase CheZ cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08485 PAJ_RS08490 PAJ_1537 PAJ_RS08490 1846894 1847283 - two-component system response regulator chemotaxis regulator that%2C when phosphorylated%2C interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08490 PAJ_RS08495 PAJ_1538 PAJ_RS08495 1847324 1848373 - chemotaxis response regulator protein-glutamate methylesterase regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08495 PAJ_RS08500 PAJ_1539 PAJ_RS08500 1848373 1849245 - chemotaxis protein-glutamate O-methyltransferase methylates the MCP gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08500 PAJ_RS08505 PAJ_1540 PAJ_RS08505 1849328 1851004 - methyl-accepting chemotaxis protein serine sensor receptor gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08505 PAJ_RS08510 PAJ_1541 PAJ_RS08510 1851116 1852678 - methyl-accepting chemotaxis protein serine sensor receptor gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08510 PAJ_RS08515 PAJ_1542 PAJ_RS08515 1852947 1853444 - chemotaxis protein CheW gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08515 PAJ_RS08520 PAJ_1543 PAJ_RS08520 1853468 1855468 - chemotaxis protein CheA gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08520 PAJ_RS08525 PAJ_1544 PAJ_RS08525 1855474 1856748 - flagellar motor protein MotB gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08525 PAJ_RS08530 PAJ_1545 PAJ_RS08530 1856745 1857632 - flagellar motor protein MotA With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08530 PAJ_RS08535 PAJ_1546 PAJ_RS08535 1857763 1858341 - transcriptional activator FlhC With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08535 PAJ_RS08540 PAJ_1547 PAJ_RS08540 1858341 1858691 - flagellar transcriptional activator FlhD with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08540 PAJ_RS08545 PAJ_1548 PAJ_RS08545 1859684 1861120 - trehalose-6-phosphate synthase gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08545 PAJ_RS08550 PAJ_1549 PAJ_RS08550 1861117 1861905 - trehalose-phosphatase biosynthetic%3B catalyzes the formation of trehalose and phosphate from trehalose-6-phosphate%3B expression is increased under osmotic stress and induced during the transition to stationary phase and by decreased temperature gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08550 PAJ_RS08555 PAJ_1550 PAJ_RS08555 1862791 1863477 + DNA-binding response regulator response regulator in two-component regulatory system with BasS gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08555 PAJ_RS08560 PAJ_1551 PAJ_RS08560 1863474 1864541 + two-component sensor histidine kinase gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08560 PAJ_RS08565 PAJ_1552 PAJ_RS08565 1864904 1865443 + peptide-methionine (S)-S-oxide reductase gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08565 PAJ_RS08570 PAJ_t0025 PAJ_RS08570 1865650 1865737 + tRNA-Ser tRNA gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08570 PAJ_RS08575 PAJ_RS08575 PAJ_RS08575 1865781 1865905 + RtT sRNA rtT sRNA%2C processed from tyrT transcript ncRNA gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08575 PAJ_RS08580 PAJ_RS08580 PAJ_RS08580 1865947 1866071 + RtT sRNA rtT sRNA%2C processed from tyrT transcript ncRNA gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08580 PAJ_RS08585 PAJ_RS08585 PAJ_RS08585 1866162 1866515 - transcriptional regulator gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08585 PAJ_RS08590 PAJ_RS08590 PAJ_RS08590 1866505 1866897 - hypothetical protein gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08590 PAJ_RS08595 PAJ_1553 PAJ_RS08595 1867222 1868169 - aliphatic sulfonate ABC transporter substrate-binding protein gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08595 PAJ_RS08600 PAJ_1554 PAJ_RS08600 1868264 1870150 - ATPase AAA gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08600 PAJ_RS08605 PAJ_1555 PAJ_RS08605 1870429 1871601 + alkanesulfonate monooxygenase catalyzes the release of sulfite from alkanesulfonates gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08605 PAJ_RS08610 PAJ_1556 PAJ_RS08610 1871617 1873029 + FAD-dependent oxidoreductase gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08610 PAJ_RS08615 PAJ_1557 PAJ_RS08615 1873098 1874507 + N5%2CN10-methylene tetrahydromethanopterin reductase gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08615 PAJ_RS08620 PAJ_1559 PAJ_RS08620 1874741 1876201 + MFS transporter gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08620 PAJ_RS08625 PAJ_1560 PAJ_RS08625 1876194 1877396 + monooxygenase gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08625 PAJ_RS08630 PAJ_1561 PAJ_RS08630 1877465 1878253 - hypothetical protein gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08630 PAJ_RS08635 PAJ_1562 PAJ_RS08635 1878831 1880117 - peroxidase gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08635 PAJ_RS08640 PAJ_1563 PAJ_RS08640 1880120 1881241 - iron uptake system protein EfeO with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08640 PAJ_RS08645 PAJ_1564 PAJ_RS08645 1881291 1882118 - iron permease gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08645 PAJ_RS08650 PAJ_1565 PAJ_RS08650 1882309 1883793 - sodium:proline symporter involved in the sodium dependent uptake of proline gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08650 PAJ_RS08655 PAJ_1566 putA putA 1884237 1888181 + trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase proline utilization protein A%3B multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate%3B in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus%3B forms dimers and is a peripherally membrane-associated protein gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08655 PAJ_RS08660 PAJ_1567 PAJ_RS08660 1888278 1888490 + hypothetical protein gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08660 PAJ_RS08665 PAJ_1568 PAJ_RS08665 1888588 1889667 - acyltransferase gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08665 PAJ_RS08670 PAJ_1569 PAJ_RS08670 1890652 1891260 + hypothetical protein gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08670 PAJ_RS08675 PAJ_1570 PAJ_RS08675 1891440 1892525 - acyltransferase gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08675 PAJ_RS08680 PAJ_1571 PAJ_RS08680 1892762 1893514 - L-cystine ABC transporter ATP-binding protein YecC gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08680 PAJ_RS08685 PAJ_1572 PAJ_RS08685 1893511 1894179 - amino acid ABC transporter permease gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08685 PAJ_RS08690 PAJ_1573 PAJ_RS08690 1894179 1894979 - cystine transporter subunit gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08690 PAJ_RS08695 PAJ_1574 PAJ_RS08695 1895113 1896099 - D-cysteine desulfhydrase gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08695 PAJ_RS08700 PAJ_1575 PAJ_RS08700 1896303 1896806 - flagellar regulatory protein FliZ gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08700 PAJ_RS08705 PAJ_1576 fliA fliA 1896858 1897580 - RNA polymerase sigma factor FliA sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08705 PAJ_RS08710 PAJ_1577 PAJ_RS08710 1897724 1898692 - hypothetical protein gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08710 PAJ_RS08715 PAJ_1578 PAJ_RS08715 1899027 1899893 + glucose-1-phosphate thymidylyltransferase gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08715 PAJ_RS08720 PAJ_1579 PAJ_RS08720 1899895 1900428 + dTDP-4-dehydrorhamnose 3%2C5-epimerase gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08720 PAJ_RS08725 PAJ_1580 PAJ_RS08725 1900428 1901294 + NAD(P)-dependent oxidoreductase gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08725 PAJ_RS08730 PAJ_1581 PAJ_RS08730 1901307 1902149 + hypothetical protein gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08730 PAJ_RS08735 PAJ_1582 PAJ_RS08735 1902409 1903641 - hypothetical protein gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08735 PAJ_RS08740 PAJ_1583 PAJ_RS08740 1903601 1904680 - acyl-protein synthetase gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08740 PAJ_RS08745 PAJ_1584 PAJ_RS08745 1904664 1906073 - acyl--CoA ligase gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08745 PAJ_RS08750 PAJ_1585 PAJ_RS08750 1906078 1907043 - transketolase gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08750 PAJ_RS08755 PAJ_1586 PAJ_RS08755 1907037 1907864 - transketolase gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08755 PAJ_RS08760 PAJ_1587 PAJ_RS08760 1907861 1908604 - 3-oxoacyl-ACP reductase gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08760 PAJ_RS08765 PAJ_1588 PAJ_RS08765 1908615 1909358 - 3-oxoacyl-ACP reductase gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08765 PAJ_RS08770 PAJ_RS08770 PAJ_RS08770 1909367 1909603 - hypothetical protein gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08770 PAJ_RS08775 PAJ_1589 PAJ_RS08775 1909638 1910741 - hypothetical protein gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08775 PAJ_RS08780 PAJ_1590 PAJ_RS08780 1910768 1911235 - Maa gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08780 PAJ_RS08785 PAJ_1591 PAJ_RS08785 1911823 1912968 - aminotransferase gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08785 PAJ_RS08790 PAJ_1592 PAJ_RS08790 1913054 1916509 - RfbC frameshifted gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08790 PAJ_RS08795 PAJ_1593 PAJ_RS08795 1916635 1920327 - hypothetical protein gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08795 PAJ_RS08800 PAJ_1594 PAJ_RS08800 1920517 1921422 - flagellin gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08800 PAJ_RS08805 PAJ_1595 PAJ_RS08805 1922287 1923219 - flagellin gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08805 PAJ_RS08810 PAJ_1596 PAJ_RS08810 1923573 1924505 - flagellin gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08810 PAJ_RS08815 PAJ_1597 PAJ_RS08815 1924813 1925742 - flagellin gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08815 PAJ_RS08820 PAJ_1598 PAJ_RS08820 1925996 1927393 + flagellar filament capping protein FliD gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08820 PAJ_RS08825 PAJ_1599 fliS fliS 1927408 1927818 + flagellar protein FliS flagellin specific chaperone gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08825 PAJ_RS08830 PAJ_1600 PAJ_RS08830 1927818 1928177 + flagellar assembly protein FliT binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway%3B acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription%3B member of the type III cytoplasmic chaperone family gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08830 PAJ_RS08835 PAJ_1601 PAJ_RS08835 1928282 1929763 + alpha-amylase converts 1%2C4-alpha-D-glucans to maltodextrin gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08835 PAJ_RS08840 PAJ_1602 PAJ_RS08840 1929846 1930304 - hypothetical protein gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08840 PAJ_RS08845 PAJ_RS08845 PAJ_RS08845 1930548 1930871 + hypothetical protein gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08845 PAJ_RS08850 PAJ_1603 PAJ_RS08850 1931007 1931303 - hypothetical protein gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08850 PAJ_RS08855 PAJ_1604 PAJ_RS08855 1931479 1931718 + virulence protein MsgA gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08855 PAJ_RS08860 PAJ_RS08860 PAJ_RS08860 1931757 1932023 - hypothetical protein gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08860 PAJ_RS08865 PAJ_RS08865 PAJ_RS08865 1932308 1932508 + hypothetical protein gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08865 PAJ_RS08870 PAJ_1605 PAJ_RS08870 1933931 1934242 - flagellar hook-basal body complex protein FliE gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08870 PAJ_RS08875 PAJ_1606 PAJ_RS08875 1934477 1936195 + flagellar M-ring protein FliF gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08875 PAJ_RS08880 PAJ_1607 fliG fliG 1936192 1937184 + flagellar motor switch protein FliG One of three proteins involved in switching the direction of the flagellar rotation gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08880 PAJ_RS08885 PAJ_1609 fliH fliH 1937177 1937875 + flagellar assembly protein H binds to and inhibits the function of flagella specific ATPase FliI gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08885 PAJ_RS08890 PAJ_1610 fliI fliI 1937875 1939236 + flagellum-specific ATP synthase FliI involved in type III protein export during flagellum assembly gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08890 PAJ_RS08895 PAJ_1611 fliJ fliJ 1939265 1939708 + flagellar protein FliJ rod/hook and filament chaperone gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08895 PAJ_RS08900 PAJ_1612 PAJ_RS08900 1939705 1940973 + flagellar hook-length control protein gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08900 PAJ_RS08905 PAJ_1613 fliL fliL 1941103 1941588 + flagellar basal body-associated protein FliL interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08905 PAJ_RS08910 PAJ_1614 fliM fliM 1941593 1942600 + flagellar motor switch protein FliM with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08910 PAJ_RS08915 PAJ_1615 fliN fliN 1942593 1943006 + flagellar motor switch protein FliN One of three proteins involved in switching the direction of the flagellar rotation gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08915 PAJ_RS08920 PAJ_1616 PAJ_RS08920 1943008 1943406 + flagellar biosynthesis protein FliO gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08920 PAJ_RS08925 PAJ_1617 fliP fliP 1943406 1944137 + flagellar biosynthetic protein FliP FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08925 PAJ_RS08930 PAJ_1618 fliQ fliQ 1944163 1944432 + flagellar export apparatus protein FliQ with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08930 PAJ_RS08935 PAJ_1619 fliR fliR 1944432 1945217 + flagellar biosynthesis protein FliR FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08935 PAJ_RS08940 PAJ_1620 PAJ_RS08940 1945846 1946481 + helix-turn-helix transcriptional regulator gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08940 PAJ_RS08945 PAJ_1621 PAJ_RS08945 1946621 1948327 + methyl-accepting chemotaxis protein gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08945 PAJ_RS08950 PAJ_1622 PAJ_RS08950 1948458 1948652 - hypothetical protein gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08950 PAJ_RS08955 PAJ_RS08955 PAJ_RS08955 1948913 1949131 - hypothetical protein gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08955 PAJ_RS08960 PAJ_RS08960 PAJ_RS08960 1949183 1949407 + hypothetical protein gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08960 PAJ_RS08965 PAJ_1623 PAJ_RS08965 1949761 1950549 + mannosyl-3-phosphoglycerate phosphatase gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08965 PAJ_RS08970 PAJ_1624 PAJ_RS08970 1950590 1951810 + glycosyl transferase gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08970 PAJ_RS08975 PAJ_1625 PAJ_RS08975 1951894 1952076 - hypothetical protein gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08975 PAJ_RS08980 PAJ_1626 PAJ_RS08980 1952424 1953326 - membrane protein gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08980 PAJ_RS08985 PAJ_RS08985 PAJ_RS08985 1953424 1953699 - hypothetical protein gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08985 PAJ_RS08990 PAJ_1627 PAJ_RS08990 1953765 1954244 - very short patch repair endonuclease DNA mismatch endonuclease%3B recognizes and repairs T:G mismatches gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08990 PAJ_RS08995 PAJ_1628 PAJ_RS08995 1954482 1955861 + DNA (cytosine-5-)-methyltransferase gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS08995 PAJ_RS09000 PAJ_1629 PAJ_RS09000 1955973 1957589 + methyl-accepting chemotaxis protein I Tsr gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09000 PAJ_RS09005 PAJ_RS09005 PAJ_RS09005 1957668 1957922 - hypothetical protein gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09005 PAJ_RS09010 PAJ_1630 PAJ_RS09010 1957996 1958700 - phosphohydrolase gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09010 PAJ_RS09015 PAJ_1631 PAJ_RS09015 1959312 1959989 + hypothetical protein gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09015 PAJ_RS09020 PAJ_1632 PAJ_RS09020 1960095 1960928 + DgsA anti-repressor MtfA Mlc anti-repressor%3B regulates ptsG by binding and inactivating Mlc gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09020 PAJ_RS09025 PAJ_t0026 PAJ_RS09025 1961041 1961116 + tRNA-Asn tRNA gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09025 PAJ_RS09030 PAJ_RS09030 PAJ_RS09030 1961189 1961521 - toxin B gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09030 PAJ_RS09035 PAJ_1633 PAJ_RS09035 1961522 1961779 - antitoxin gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09035 PAJ_RS09040 PAJ_1634 PAJ_RS09040 1962832 1963794 - ferrochelatase gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09040 PAJ_RS09045 PAJ_1635 PAJ_RS09045 1964542 1965780 + MFS transporter gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09045 PAJ_RS09050 PAJ_RS09050 PAJ_RS09050 1966056 1966493 - hypothetical protein gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09050 PAJ_RS09055 PAJ_1636 PAJ_RS09055 1966656 1967666 - ABC transporter permease gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09055 PAJ_RS09060 PAJ_1637 PAJ_RS09060 1967663 1968634 - ABC transporter substrate-binding protein gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09060 PAJ_RS09065 PAJ_1638 PAJ_RS09065 1968627 1969430 - ferric enterobactin transport ATP-binding protein FepC gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09065 PAJ_RS09070 PAJ_RS09070 PAJ_RS09070 1969683 1969979 - hypothetical protein gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09070 PAJ_RS09075 PAJ_1639 PAJ_RS09075 1970059 1970547 - heat-shock protein IbpA gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09075 PAJ_RS09080 PAJ_1640 PAJ_RS09080 1970777 1971949 - glycoporin gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09080 PAJ_RS09085 PAJ_1641 PAJ_RS09085 1971992 1973899 - transcriptional regulator gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09085 PAJ_RS09090 PAJ_1642 PAJ_RS09090 1973902 1976536 - alpha-mannosidase frameshifted gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09090 PAJ_RS09095 PAJ_1643 PAJ_RS09095 1976562 1977665 - PTS fructose transporter subunit IIC gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09095 PAJ_RS09100 PAJ_1644 PAJ_RS09100 1977679 1978002 - PTS fructose transporter subunit IIB gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09100 PAJ_RS09105 PAJ_1645 PAJ_RS09105 1977999 1978460 - PTS fructose transporter subunit IIA gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09105 PAJ_RS09110 PAJ_RS09110 PAJ_RS09110 1979096 1979416 - hypothetical protein gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09110 PAJ_RS09115 PAJ_RS09115 PAJ_RS09115 1979460 1979723 - hypothetical protein gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09115 PAJ_RS09120 PAJ_RS09120 PAJ_RS09120 1980268 1980516 - hypothetical protein gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09120 PAJ_RS09125 PAJ_RS09125 PAJ_RS09125 1980844 1981086 - type IV secretion protein Rhs gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09125 PAJ_RS09130 PAJ_RS09130 PAJ_RS09130 1981643 1981849 - hypothetical protein gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09130 PAJ_RS09135 PAJ_1646 PAJ_RS09135 1981865 1986367 - type IV secretion protein Rhs gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09135 PAJ_RS09140 PAJ_RS09140 PAJ_RS09140 1986371 1986811 - hypothetical protein gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09140 PAJ_RS09145 PAJ_1647 PAJ_RS09145 1986824 1987672 - hypothetical protein gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09145 PAJ_RS09150 PAJ_1648 PAJ_RS09150 1987683 1988426 - hypothetical protein gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09150 PAJ_RS09155 PAJ_RS09155 PAJ_RS09155 1988679 1989059 - hypothetical protein gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09155 PAJ_RS09160 PAJ_1649 PAJ_RS09160 1989056 1991559 - type IV secretion protein Rhs frameshifted gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09160 PAJ_RS09165 PAJ_RS09165 PAJ_RS09165 1991607 1991999 - type VI secretion protein gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09165 PAJ_RS09170 PAJ_1651 PAJ_RS09170 1992009 1992614 - hypothetical protein gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09170 PAJ_RS09175 PAJ_1652 PAJ_RS09175 1992627 1993697 - hypothetical protein gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09175 PAJ_RS09180 PAJ_1653 PAJ_RS09180 1993694 1996234 - hypothetical protein gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09180 PAJ_RS09185 PAJ_RS09185 PAJ_RS09185 1996600 1996962 - hypothetical protein gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09185 PAJ_RS09190 PAJ_RS09190 PAJ_RS09190 1997077 1997451 - hypothetical protein gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09190 PAJ_RS09195 PAJ_RS09195 PAJ_RS09195 1997653 1998033 - hypothetical protein gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09195 PAJ_RS09200 PAJ_RS09200 PAJ_RS09200 1998138 1998515 - hypothetical protein gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09200 PAJ_RS09205 PAJ_1654 PAJ_RS09205 1998532 2000758 - ImpA family type VI secretion-associated protein frameshifted gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09205 PAJ_RS09210 PAJ_1655 PAJ_RS09210 2000770 2002233 - nuclease PIN gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09210 PAJ_RS09215 PAJ_1656 PAJ_RS09215 2002263 2004872 - ClpV1 family T6SS ATPase gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09215 PAJ_RS09220 PAJ_1657 PAJ_RS09220 2004926 2005975 - hypothetical protein gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09220 PAJ_RS09225 PAJ_1658 PAJ_RS09225 2005972 2007849 - type VI secretion system protein ImpG gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09225 PAJ_RS09230 PAJ_1659 PAJ_RS09230 2007852 2008427 - hypothetical protein gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09230 PAJ_RS09235 PAJ_1660 PAJ_RS09235 2008417 2009244 - hypothetical protein gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09235 PAJ_RS09240 PAJ_1661 PAJ_RS09240 2009261 2010316 - hypothetical protein gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09240 PAJ_RS09245 PAJ_1662 PAJ_RS09245 2010285 2011076 - serine/threonine phosphatase gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09245 PAJ_RS09250 PAJ_1663 PAJ_RS09250 2011073 2012968 - hypothetical protein gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09250 PAJ_RS09255 PAJ_RS09255 PAJ_RS09255 2013585 2013986 - hypothetical protein gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09255 PAJ_RS09260 PAJ_1664 PAJ_RS09260 2013999 2014874 - hypothetical protein gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09260 PAJ_RS09265 PAJ_1665 PAJ_RS09265 2014998 2015480 - hypothetical protein gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09265 PAJ_RS09270 PAJ_1666 PAJ_RS09270 2016061 2017560 - type VI secretion protein EvpB gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09270 PAJ_RS09275 PAJ_1667 PAJ_RS09275 2017560 2018090 - type VI secretion system-associated protein gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09275 PAJ_RS09280 PAJ_1668 PAJ_RS09280 2018171 2019193 - hypothetical protein gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09280 PAJ_RS09285 PAJ_1669 PAJ_RS09285 2019204 2019917 - type VI secretion-associated protein gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09285 PAJ_RS09290 PAJ_1670 PAJ_RS09290 2019932 2023559 - type VI secretion system protein ImpL frameshifted gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09290 PAJ_RS09295 PAJ_1671 PAJ_RS09295 2023563 2024804 - hypothetical protein gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09295 PAJ_RS09300 PAJ_1672 PAJ_RS09300 2024821 2026161 - type VI secretion system-associated protein gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09300 PAJ_RS09305 PAJ_1673 PAJ_RS09305 2026183 2026686 - type VI secretion system-associated lipoprotein gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09305 PAJ_RS09310 PAJ_1674 PAJ_RS09310 2026710 2027309 - hypothetical protein gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09310 PAJ_RS09315 PAJ_1675 PAJ_RS09315 2028419 2029834 - MATE family efflux transporter gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09315 PAJ_RS09320 PAJ_1676 PAJ_RS09320 2030229 2031683 + AMP nucleosidase Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09320 PAJ_RS09325 PAJ_1677 PAJ_RS09325 2031766 2032572 - hypothetical protein gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09325 PAJ_RS09330 PAJ_1678 PAJ_RS09330 2032897 2034192 - guanine permease gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09330 PAJ_RS09335 PAJ_1679 PAJ_RS09335 2034643 2035386 + DNA-binding response regulator gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09335 PAJ_RS09340 PAJ_1680 PAJ_RS09340 2035323 2036375 - sugar kinase gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09340 PAJ_RS09345 PAJ_1681 PAJ_RS09345 2036376 2037236 - hypothetical protein gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09345 PAJ_RS09350 PAJ_1682 PAJ_RS09350 2037236 2037928 - hypothetical protein gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09350 PAJ_RS09355 PAJ_1683 PAJ_RS09355 2037977 2038915 - ribose ABC transporter substrate-binding protein RbsB gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09355 PAJ_RS09360 PAJ_1684 PAJ_RS09360 2038987 2039967 - ribose ABC transporter permease gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09360 PAJ_RS09365 PAJ_1685 PAJ_RS09365 2039978 2041492 - D-ribose transporter ATP-binding protein with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09365 PAJ_RS09370 PAJ_1686 PAJ_RS09370 2041637 2044237 + wide host range VirA protein gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09370 PAJ_RS09375 PAJ_1687 PAJ_RS09375 2044191 2045075 - phosphonate ABC transporter%2C permease protein PhnE gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09375 PAJ_RS09380 PAJ_1688 PAJ_RS09380 2045078 2045932 - phosphonate ABC transporter%2C permease protein PhnE gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09380 PAJ_RS09385 PAJ_1689 PAJ_RS09385 2046062 2046985 - phosphonate ABC transporter substrate-binding protein gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09385 PAJ_RS09390 PAJ_1690 PAJ_RS09390 2047017 2047847 - phosphonate ABC transporter ATP-binding protein gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09390 PAJ_RS09395 PAJ_1691 phnP phnP 2048021 2048791 - phosphonate metabolism protein PhnP required for the use of phosphonates and phosphite as phosphorus sources gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09395 PAJ_RS09400 PAJ_1692 PAJ_RS09400 2048788 2049324 - ribose 1%2C5-bisphosphate phosphokinase PhnN gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09400 PAJ_RS09405 PAJ_1693 PAJ_RS09405 2049324 2050460 - phosphonate metabolism protein PhnM gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09405 PAJ_RS09410 PAJ_1694 PAJ_RS09410 2050457 2051176 - phosphonate C-P lyase system protein PhnL gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09410 PAJ_RS09415 PAJ_1695 phnK phnK 2051176 2051937 - phosphonate C-P lyase system protein PhnK gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09415 PAJ_RS09420 PAJ_1696 PAJ_RS09420 2051927 2052775 - carbon-phosphorus lyase complex subunit PhnJ required for use of phosphonate and phosphite gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09420 PAJ_RS09425 PAJ_1698 PAJ_RS09425 2052768 2053843 - carbon-phosphorus lyase complex subunit PhnI required for the use of phosphonate and phosphite%3B frameshifted gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09425 PAJ_RS09430 PAJ_1699 phnH phnH 2053834 2054418 - carbon-phosphorus lyase subunit PhnH gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09430 PAJ_RS09435 PAJ_1700 PAJ_RS09435 2054415 2054864 - alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09435 PAJ_RS09440 PAJ_1701 PAJ_RS09440 2054864 2055578 - phosphonate metabolism transcriptional regulator PhnF may be involved in phosphonate uptake and biodegradation%3B frameshifted gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09440 PAJ_RS09445 PAJ_1702 PAJ_RS09445 2055743 2056432 - cysteine hydrolase gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09445 PAJ_RS09450 PAJ_1703 PAJ_RS09450 2056425 2057729 - cobalamin biosynthesis protein gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09450 PAJ_RS09455 PAJ_1704 PAJ_RS09455 2058222 2060147 + hypothetical protein gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09455 PAJ_RS09460 PAJ_1705 PAJ_RS09460 2060217 2060729 - AsnC family transcriptional regulator gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09460 PAJ_RS09465 PAJ_1706 PAJ_RS09465 2060981 2062297 - 4-aminobutyrate transaminase catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09465 PAJ_RS09470 PAJ_1707 PAJ_RS09470 2062411 2063544 - peptidase M20 gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09470 PAJ_RS09475 PAJ_1708 PAJ_RS09475 2063546 2064472 - glyoxylate/hydroxypyruvate reductase A gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09475 PAJ_RS09480 PAJ_1709 PAJ_RS09480 2064472 2065314 - histone acetyltransferase gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09480 PAJ_RS09485 PAJ_1710 PAJ_RS09485 2065325 2066656 - D-amino-acid oxidase gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09485 PAJ_RS09490 PAJ_1711 PAJ_RS09490 2066746 2068410 - ABC transporter gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09490 PAJ_RS09495 PAJ_1712 PAJ_RS09495 2068407 2069255 - DNA-directed RNA polymerase subunit alpha gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09495 PAJ_RS09500 PAJ_1713 PAJ_RS09500 2069255 2070208 - ABC transporter permease gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09500 PAJ_RS09505 PAJ_1714 PAJ_RS09505 2070235 2071842 - ABC transporter substrate-binding protein gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09505 PAJ_RS09510 PAJ_1715 PAJ_RS09510 2071988 2073265 - FAD-dependent oxidoreductase gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09510 PAJ_RS09515 PAJ_1716 PAJ_RS09515 2073276 2073944 - dehalogenase gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09515 PAJ_RS09520 PAJ_1717 PAJ_RS09520 2073977 2075446 - aldehyde dehydrogenase gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09520 PAJ_RS09525 PAJ_1718 gabD gabD 2075801 2077258 - NAD-dependent succinate-semialdehyde dehydrogenase catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09525 PAJ_RS09530 PAJ_1719 cbl cbl 2077410 2078369 - CysB family transcriptional regulator LysR-type transcriptional regulator similar to CysB%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon%3B regulated by CysB%3B DNA-binding transcriptional activator for the ssuEADCB and tauABCD operons gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09530 PAJ_RS09535 PAJ_1720 PAJ_RS09535 2078580 2079497 - LysR family transcriptional regulator Transcriptional activator for the hut%2C put and ure operons and repressor for the gdh and gltB operons in response to nitrogen limitation gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09535 PAJ_RS09540 PAJ_1721 PAJ_RS09540 2080270 2081304 - ABC transporter gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09540 PAJ_RS09545 PAJ_1722 PAJ_RS09545 2081319 2082803 - D-ribose transporter ATP-binding protein with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09545 PAJ_RS09550 PAJ_1723 PAJ_RS09550 2082834 2083757 - sugar ABC transporter substrate-binding protein gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09550 PAJ_RS09555 PAJ_t0027 PAJ_RS09555 2084261 2084336 + tRNA-Asn tRNA gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09555 PAJ_RS09560 PAJ_1724 PAJ_RS09560 2085134 2086678 + chemotaxis protein gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09560 PAJ_RS09565 PAJ_1725 PAJ_RS09565 2086988 2087137 - ferredoxin PaaE gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09565 PAJ_RS09570 PAJ_1726 PAJ_RS09570 2087202 2089001 - hypothetical protein gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09570 PAJ_RS09575 PAJ_t0028 PAJ_RS09575 2089292 2089367 + tRNA-Asn tRNA gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09575 PAJ_RS09580 PAJ_RS09580 PAJ_RS09580 2089517 2089774 - hypothetical protein gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09580 PAJ_RS09585 PAJ_RS09585 PAJ_RS09585 2089793 2089978 + hypothetical protein gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09585 PAJ_RS09590 PAJ_1727 PAJ_RS09590 2090347 2090817 - AsnC family transcriptional regulator gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09590 PAJ_RS09595 PAJ_1728 PAJ_RS09595 2091099 2091725 + lysine transporter LysE gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09595 PAJ_RS09600 PAJ_1729 PAJ_RS09600 2091904 2092542 + TetR family transcriptional regulator gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09600 PAJ_RS09605 PAJ_1730 PAJ_RS09605 2092616 2094013 + hypothetical protein gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09605 PAJ_RS09610 PAJ_1731 PAJ_RS09610 2094015 2094842 + glycosyl transferase gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09610 PAJ_RS09615 PAJ_1732 PAJ_RS09615 2094922 2096043 - myo-inositol 2-dehydrogenase gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09615 PAJ_RS09620 PAJ_t0029 PAJ_RS09620 2096365 2096440 + tRNA-Asn tRNA gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09620 PAJ_RS09625 PAJ_RS09625 PAJ_RS09625 2096963 2097265 - transcriptional regulator gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09625 PAJ_RS09630 PAJ_1733 PAJ_RS09630 2097906 2098220 - L-rhamnose mutarotase gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09630 PAJ_RS09635 PAJ_1734 PAJ_RS09635 2098210 2099052 - rhamnulose-1-phosphate aldolase gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09635 PAJ_RS09640 PAJ_1735 PAJ_RS09640 2099063 2100319 - L-rhamnose isomerase catalyzes the formation of L-rhamnulose from L-rhamnose gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09640 PAJ_RS09645 PAJ_1736 PAJ_RS09645 2100303 2101784 - rhamnulokinase gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09645 PAJ_RS09650 PAJ_1737 PAJ_RS09650 2102073 2102894 + AraC family transcriptional regulator gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09650 PAJ_RS09655 PAJ_1738 PAJ_RS09655 2102909 2103775 + transcriptional regulator activates the expression of rhaRS in response to L-rhamnose gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09655 PAJ_RS09660 PAJ_1739 PAJ_RS09660 2103812 2104846 - sugar:proton symporter transports L-rhamnose and L-lyxose into the cell gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09660 PAJ_RS09665 PAJ_1740 PAJ_RS09665 2105677 2107110 + aldehyde dehydrogenase NAD-linked gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09665 PAJ_RS09670 PAJ_1741 PAJ_RS09670 2107330 2107551 - hypothetical protein gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09670 PAJ_RS09675 PAJ_1742 PAJ_RS09675 2107854 2108684 - hypothetical protein gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09675 PAJ_RS09680 PAJ_1743 PAJ_RS09680 2108720 2109202 - hypothetical protein gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09680 PAJ_RS09685 PAJ_1744 PAJ_RS09685 2109233 2109715 - hypothetical protein gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09685 PAJ_RS09690 PAJ_1745 PAJ_RS09690 2110196 2111218 - alkanal monooxygenase gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09690 PAJ_RS09695 PAJ_1746 PAJ_RS09695 2111488 2112402 + 2-dehydropantoate 2-reductase gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09695 PAJ_RS09700 PAJ_1747 lacI lacI 2112495 2113553 + lac repressor transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09700 PAJ_RS09705 PAJ_1748 PAJ_RS09705 2113652 2113978 - hypothetical protein gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09705 PAJ_RS09710 PAJ_1749 PAJ_RS09710 2114139 2115197 - membrane protein gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09710 PAJ_RS09715 PAJ_1750 PAJ_RS09715 2115408 2116568 - D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09715 PAJ_RS09720 PAJ_1751 sbcB sbcB 2116764 2118185 + exodeoxyribonuclease I Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09720 PAJ_RS09725 PAJ_1752 PAJ_RS09725 2118233 2119588 - GntP family transporter member of the Gnt family of gluconate transporters%3B not involved in gluconate transport%3B unknown function gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09725 PAJ_RS09730 PAJ_1753 PAJ_RS09730 2119717 2120502 - hypothetical protein gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09730 PAJ_RS09735 PAJ_1754 PAJ_RS09735 2120502 2121128 - class II aldolase gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09735 PAJ_RS09740 PAJ_1755 PAJ_RS09740 2121121 2122383 - membrane protein gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09740 PAJ_RS09745 PAJ_1756 PAJ_RS09745 2122383 2123288 - oxidoreductase gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09745 PAJ_RS09750 PAJ_1757 PAJ_RS09750 2123553 2124323 + DeoR family transcriptional regulator gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09750 PAJ_RS09755 PAJ_1758 PAJ_RS09755 2124374 2125732 - putrescine/spermidine ABC transporter gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09755 PAJ_RS09760 PAJ_1759 PAJ_RS09760 2126105 2127520 - gamma-glutamylputrescine synthetase gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09760 PAJ_RS09765 PAJ_1760 PAJ_RS09765 2127733 2128494 + gamma-glutamyl-gamma-aminobutyrate hydrolase gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09765 PAJ_RS09770 PAJ_1761 PAJ_RS09770 2128491 2129049 + transcriptional regulator regulates genes involved in putrescine degradation%3B frameshifted gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09770 PAJ_RS09775 PAJ_1762 PAJ_RS09775 2129077 2130354 + gamma-glutamylputrescine oxidoreductase catalyzes the formation of gamma-glutamyl-gamma-aminobutyraldehyde from gamma-glutamylputrescine gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09775 PAJ_RS09780 PAJ_1763 PAJ_RS09780 2130388 2131215 - NAD(P)-dependent oxidoreductase gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09780 PAJ_RS09785 PAJ_1764 hisG hisG 2131591 2132490 + ATP phosphoribosyltransferase long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09785 PAJ_RS09790 PAJ_1765 hisD hisD 2132494 2133801 + histidinol dehydrogenase catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09790 PAJ_RS09795 PAJ_1766 PAJ_RS09795 2133798 2134868 + histidinol-phosphate transaminase catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09795 PAJ_RS09800 PAJ_1767 PAJ_RS09800 2134871 2135938 + bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09800 PAJ_RS09805 PAJ_1769 hisH hisH 2135938 2136528 + imidazole glycerol phosphate synthase subunit HisH with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09805 PAJ_RS09810 PAJ_1770 PAJ_RS09810 2136528 2137265 + 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09810 PAJ_RS09815 PAJ_1771 PAJ_RS09815 2137247 2138023 + imidazole glycerol phosphate synthase cyclase subunit gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09815 PAJ_RS09820 PAJ_1772 PAJ_RS09820 2138017 2138628 + bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09820 PAJ_RS09825 PAJ_1773 PAJ_RS09825 2138742 2140058 + toxin HipA gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09825 PAJ_RS09830 PAJ_1774 PAJ_RS09830 2140055 2140390 + transcriptional regulator gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09830 PAJ_RS09835 PAJ_1775 PAJ_RS09835 2140359 2140853 + hypothetical protein gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09835 PAJ_RS09840 PAJ_1776 PAJ_RS09840 2140920 2141717 + ABC transporter substrate-binding protein gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09840 PAJ_RS09845 PAJ_1777 PAJ_RS09845 2141822 2143120 + hypothetical protein gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09845 PAJ_RS09850 PAJ_1778 PAJ_RS09850 2143168 2144577 - phosphogluconate dehydrogenase (NADP(+)-dependent%2C decarboxylating) catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09850 PAJ_RS09855 PAJ_1779 PAJ_RS09855 2145256 2146044 + hypothetical protein gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09855 PAJ_RS09860 PAJ_RS09860 PAJ_RS09860 2146041 2146415 + capsular biosynthesis protein gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09860 PAJ_RS09865 PAJ_1780 PAJ_RS09865 2146412 2147953 + capsular polysaccharide biosynthesis protein BcbG gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09865 PAJ_RS09870 PAJ_1781 PAJ_RS09870 2147950 2148654 + capsular polysaccharide biosynthesis protein%2C BcbE gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09870 PAJ_RS09875 PAJ_1782 PAJ_RS09875 2148647 2149447 + hypothetical protein gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09875 PAJ_RS09880 PAJ_1783 PAJ_RS09880 2149450 2150205 + sugar ABC transporter ATP-binding protein gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09880 PAJ_RS09885 PAJ_1784 PAJ_RS09885 2150225 2151061 + hypothetical protein gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09885 PAJ_RS09890 PAJ_1785 PAJ_RS09890 2151058 2152086 - hypothetical protein gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09890 PAJ_RS09895 PAJ_1786 PAJ_RS09895 2152411 2153403 + hypothetical protein gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09895 PAJ_RS09900 PAJ_1787 PAJ_RS09900 2153649 2154662 - UDP-glucose 4-epimerase GalE gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09900 PAJ_RS09905 PAJ_1788 PAJ_RS09905 2154708 2155604 - GalU regulator GalF gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09905 PAJ_RS09910 PAJ_1789 PAJ_RS09910 2155872 2157212 - lipopolysaccharide biosynthesis protein gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09910 PAJ_RS09915 PAJ_1790 PAJ_RS09915 2157209 2158432 - colanic acid biosynthesis glycosyltransferase WcaL gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09915 PAJ_RS09920 PAJ_1791 PAJ_RS09920 2158437 2159699 - colanic acid biosynthesis pyruvyl transferase WcaK gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09920 PAJ_RS09925 PAJ_1792 PAJ_RS09925 2159850 2162060 - amylovoran biosynthesis protein AmsF gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09925 PAJ_RS09930 PAJ_1793 PAJ_RS09930 2162147 2163181 - amylovoran biosynthesis glycosyl transferase AmsD gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09930 PAJ_RS09935 PAJ_1794 PAJ_RS09935 2163227 2163979 - glycosyl transferase WcaA gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09935 PAJ_RS09940 PAJ_1795 PAJ_RS09940 2164061 2164978 - amylovoran biosynthesis protein AmsB gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09940 PAJ_RS09945 PAJ_1796 PAJ_RS09945 2165108 2166244 - amylovoran biosynthesis protein AmsC gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09945 PAJ_RS09950 PAJ_1797 PAJ_RS09950 2166500 2168677 - tyrosine kinase Wzc%3B catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide) gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09950 PAJ_RS09955 PAJ_1798 PAJ_RS09955 2168690 2169124 - protein-tyrosine-phosphatase Wzb shows phosphatase activity towards the autophosphorylated Wzc protein%2C which induces colanic acid biosynthesis%3B catalyzes the phosphorylation of UDP-glucose dehydrogenase%2C an enzyme involved in colanic acid biosynthesis gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09955 PAJ_RS09960 PAJ_1799 PAJ_RS09960 2169134 2170273 - polysaccharide export protein Wza required for the translocation of capsular polysaccharide through the outer membrane gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09960 PAJ_RS09965 PAJ_1800 PAJ_RS09965 2170547 2171980 - undecaprenyl-phosphate galactose phosphotransferase WbaP gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09965 PAJ_RS09970 PAJ_1801 PAJ_RS09970 2172758 2174335 + membrane protein gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09970 PAJ_RS09975 PAJ_1802 PAJ_RS09975 2174332 2176155 - outer membrane assembly protein AsmA gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09975 PAJ_RS09980 PAJ_1803 PAJ_RS09980 2176170 2176751 - dCTP deaminase gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09980 PAJ_RS09985 PAJ_1804 PAJ_RS09985 2176836 2177477 - uridine kinase gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09985 PAJ_RS09990 PAJ_1805 PAJ_RS09990 2177755 2178369 + hypothetical protein gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09990 PAJ_RS09995 PAJ_1806 PAJ_RS09995 2178533 2181409 + diguanylate cyclase gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS09995 PAJ_RS10000 PAJ_RS10000 PAJ_RS10000 2181390 2181872 + hypothetical protein gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10000 PAJ_RS10005 PAJ_1807 PAJ_RS10005 2181949 2183301 + molecular chaperone gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10005 PAJ_RS10010 PAJ_RS10010 PAJ_RS10010 2183337 2183660 + hypothetical protein gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10010 PAJ_RS10015 PAJ_1808 PAJ_RS10015 2183703 2184935 + multidrug resistance protein MdtA gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10015 PAJ_RS10020 PAJ_1809 PAJ_RS10020 2184935 2188057 + multidrug transporter subunit MdtB Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10020 PAJ_RS10025 PAJ_1810 PAJ_RS10025 2188054 2191131 + multidrug resistance protein MdtC Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10025 PAJ_RS10030 PAJ_1811 PAJ_RS10030 2191144 2192544 + multidrug transporter subunit MdtD gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10030 PAJ_RS10035 PAJ_1812 PAJ_RS10035 2192541 2193929 + two-component sensor histidine kinase gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10035 PAJ_RS10040 PAJ_1813 PAJ_RS10040 2193936 2194643 + DNA-binding response regulator response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10040 PAJ_RS10045 PAJ_1814 PAJ_RS10045 2194760 2196136 + U32 family peptidase gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10045 PAJ_RS10050 PAJ_1815 PAJ_RS10050 2196367 2197269 + lipid kinase YegS cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10050 PAJ_RS10055 PAJ_1816 PAJ_RS10055 2197426 2198892 + D-mannonate oxidoreductase gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10055 PAJ_RS10060 PAJ_1817 PAJ_RS10060 2198936 2199622 + GntR family transcriptional regulator gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10060 PAJ_RS10065 PAJ_1818 PAJ_RS10065 2199657 2200457 - hydroxymethylpyrimidine/phosphomethylpyrimidine kinase catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10065 PAJ_RS10070 PAJ_1819 PAJ_RS10070 2200444 2201286 - hydroxyethylthiazole kinase gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10070 PAJ_RS10075 PAJ_1820 PAJ_RS10075 2201524 2202594 + hypothetical protein gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10075 PAJ_RS10080 PAJ_1821 PAJ_RS10080 2202601 2203140 + hypothetical protein gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10080 PAJ_RS10085 PAJ_RS10085 PAJ_RS10085 2203453 2203650 + hypothetical protein gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10085 PAJ_RS10090 PAJ_1822 PAJ_RS10090 2203743 2204702 + membrane protein gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10090 PAJ_RS10095 PAJ_1823 PAJ_RS10095 2204750 2206318 - alkyl hydroperoxide reductase subunit F gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10095 PAJ_RS10100 PAJ_1824 PAJ_RS10100 2206390 2206953 - alkyl hydroperoxide reductase subunit C with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols%3B AhpC reduced the hydroperoxide substrate gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10100 PAJ_RS10105 PAJ_1825 PAJ_RS10105 2207289 2207744 + GCN5 family acetyltransferase gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10105 PAJ_RS10110 PAJ_1826 PAJ_RS10110 2207741 2208853 - Fe-S-binding ATPase gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10110 PAJ_RS10115 PAJ_1827 metG metG 2209030 2211063 + methionine--tRNA ligase methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10115 PAJ_RS10120 PAJ_1828 PAJ_RS10120 2211182 2211574 + murein hydrolase regulator LrgA gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10120 PAJ_RS10125 PAJ_1829 PAJ_RS10125 2211567 2212259 + CidB/LrgB family autolysis modulator gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10125 PAJ_RS10130 PAJ_1830 PAJ_RS10130 2212379 2213269 + cytidine deaminase Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10130 PAJ_RS10135 PAJ_1831 PAJ_RS10135 2213438 2215135 + NAD-dependent malic enzyme malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10135 PAJ_RS10140 PAJ_1832 PAJ_RS10140 2215269 2215988 + vancomycin high temperature exclusion protein involved in vancomycin sensitivity and other barrier functions of the cell envelope gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10140 PAJ_RS10145 PAJ_1833 mglC mglC 2216251 2217261 - galactoside ABC transporter permease MglC ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10145 PAJ_RS10150 PAJ_1834 PAJ_RS10150 2217281 2218801 - galactose/methyl galactoside ABC transporter ATP-binding protein MglA gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10150 PAJ_RS10155 PAJ_1835 PAJ_RS10155 2218872 2219868 - sugar ABC transporter substrate-binding protein wtih MglAC is involved in the transport of beta-methylgalactoside%3B frameshifted gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10155 PAJ_RS10160 PAJ_1836 PAJ_RS10160 2220190 2221230 - DNA-binding transcriptional regulator GalS controls transcription of galETKM gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10160 PAJ_RS10165 PAJ_1837 PAJ_RS10165 2221373 2222533 - membrane protein gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10165 PAJ_RS10170 PAJ_1838 folE folE 2222584 2223249 - GTP cyclohydrolase I FolE involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10170 PAJ_RS10175 PAJ_1839 PAJ_RS10175 2223375 2224502 - MFS transporter gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10175 PAJ_RS10180 PAJ_1840 PAJ_RS10180 2224609 2225520 + LysR family transcriptional regulator gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10180 PAJ_RS10185 PAJ_1841 PAJ_RS10185 2225599 2226723 + S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10185 PAJ_RS10190 PAJ_1842 PAJ_RS10190 2226739 2227584 + S-formylglutathione hydrolase gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10190 PAJ_RS10195 PAJ_1843 PAJ_RS10195 2227621 2228412 - iron ABC transporter ATP-binding protein gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10195 PAJ_RS10200 PAJ_1844 PAJ_RS10200 2228409 2229485 - iron-siderophore ABC transporter permease gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10200 PAJ_RS10205 PAJ_1845 PAJ_RS10205 2229627 2231093 - lysine transporter gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10205 PAJ_RS10210 PAJ_1846 PAJ_RS10210 2231277 2232143 - LysR family transcriptional regulator gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10210 PAJ_RS10215 PAJ_RS10215 PAJ_RS10215 2232158 2232523 - hypothetical protein gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10215 PAJ_RS10220 PAJ_1847 PAJ_RS10220 2232626 2233678 + membrane protein gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10220 PAJ_RS10225 PAJ_1848 PAJ_RS10225 2233857 2234750 + hypothetical protein gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10225 PAJ_RS10230 PAJ_1849 PAJ_RS10230 2234998 2235840 + deoxyribonuclease IV Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10230 PAJ_RS10235 PAJ_1850 PAJ_RS10235 2235886 2237580 - PTS fructose transporter subunit IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10235 PAJ_RS10240 PAJ_1851 fruK fruK 2237597 2238535 - 1-phosphofructokinase converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10240 PAJ_RS10245 PAJ_1852 PAJ_RS10245 2238532 2239662 - bifunctional PTS fructose transporter subunit IIA/HPr protein phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10245 PAJ_RS10250 PAJ_1853 PAJ_RS10250 2240057 2241343 - C4-dicarboxylate ABC transporter gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10250 PAJ_RS10255 PAJ_1854 PAJ_RS10255 2241659 2242588 - dihydrodipicolinate synthase family protein gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10255 PAJ_RS10260 PAJ_1855 PAJ_RS10260 2242836 2243867 - LacI family transcriptional regulator gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10260 PAJ_RS10265 PAJ_1856 PAJ_RS10265 2244343 2245725 + membrane protein gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10265 PAJ_RS10270 PAJ_1857 PAJ_RS10270 2246038 2246679 - hypothetical protein gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10270 PAJ_RS10275 PAJ_1859 PAJ_RS10275 2247513 2248085 + elongation factor P-like protein YeiP Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10275 PAJ_RS10280 PAJ_1860 PAJ_RS10280 2248163 2249140 + hypothetical protein gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10280 PAJ_RS10285 PAJ_1861 PAJ_RS10285 2249182 2249883 + membrane protein gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10285 PAJ_RS10290 PAJ_1862 spr spr 2250400 2250969 + membrane protein mutational suppressor of prc thermosensitivity gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10290 PAJ_RS10295 PAJ_1863 PAJ_RS10295 2251176 2252738 + protein Rtn gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10295 PAJ_RS10300 PAJ_1864 PAJ_RS10300 2252804 2254618 + peptide ABC transporter substrate-binding protein with YejBEF is involved in resistance to microcin C gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10300 PAJ_RS10305 PAJ_1865 PAJ_RS10305 2254630 2255724 + microcin C ABC transporter permease YejB with YejAEF is involved in resistance to microcin C gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10305 PAJ_RS10310 PAJ_1866 PAJ_RS10310 2255724 2256746 + microcin C ABC transporter permease part of the microcin C transport system gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10310 PAJ_RS10315 PAJ_1867 PAJ_RS10315 2256747 2258351 + microcin C ABC transporter ATP-binding protein YejF with YejAEF is involved in resistance to microcin C gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10315 PAJ_RS10320 PAJ_1868 PAJ_RS10320 2258338 2258658 - hypothetical protein gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10320 PAJ_RS10325 PAJ_1869 PAJ_RS10325 2258924 2260120 - Bcr/CflA family multidrug efflux MFS transporter Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10325 PAJ_RS10330 PAJ_1870 PAJ_RS10330 2260132 2260851 - 16S rRNA pseudouridine(516) synthase catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10330 PAJ_RS10335 PAJ_1871 PAJ_RS10335 2261007 2262761 + hypothetical protein gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10335 PAJ_RS10340 PAJ_1872 PAJ_RS10340 2262893 2263177 + 50S ribosomal protein L25 the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10340 PAJ_RS10345 PAJ_1873 PAJ_RS10345 2263270 2264274 - nucleoid-associated protein YejK gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10345 PAJ_RS10350 PAJ_1874 PAJ_RS10350 2264433 2264657 + hypothetical protein gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10350 PAJ_RS10355 PAJ_1875 PAJ_RS10355 2264680 2266434 + membrane protein gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10355 PAJ_RS10360 PAJ_t0030 PAJ_RS10360 2266508 2266584 + tRNA-Pro tRNA gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10360 PAJ_RS10365 PAJ_RS10365 PAJ_RS10365 2266690 2266875 - hypothetical protein gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10365 PAJ_RS10370 PAJ_1876 PAJ_RS10370 2266972 2268000 - hypothetical protein gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10370 PAJ_RS10375 PAJ_RS10375 PAJ_RS10375 2268003 2268197 - hypothetical protein gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10375 PAJ_RS10380 PAJ_1877 tldD tldD 2268223 2269680 - peptidase C69 responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10380 PAJ_RS10385 PAJ_1878 PAJ_RS10385 2269698 2271071 - protein PmbA gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10385 PAJ_RS10390 PAJ_1879 PAJ_RS10390 2271074 2272330 - thiol reductase thioredoxin gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10390 PAJ_RS10395 PAJ_1880 PAJ_RS10395 2272360 2274051 - ABC transporter ATP-binding protein gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10395 PAJ_RS10400 PAJ_1881 PAJ_RS10400 2274080 2276524 - TonB-dependent siderophore receptor gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10400 PAJ_RS10405 PAJ_1882 PAJ_RS10405 2277222 2277761 + RNA polymerase sigma factor Bacteria have multiple sigma factors which are active under specific conditions%3B the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10405 PAJ_RS10410 PAJ_1883 PAJ_RS10410 2277758 2278714 + sugar ABC transporter substrate-binding protein gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10410 PAJ_RS10415 PAJ_1884 PAJ_RS10415 2278838 2279665 + cell envelope biogenesis protein TonB gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10415 PAJ_RS10420 PAJ_1885 PAJ_RS10420 2279715 2280467 + biopolymer transport protein ExbB gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10420 PAJ_RS10425 PAJ_1886 PAJ_RS10425 2280500 2280925 + biopolymer transporter ExbD gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10425 PAJ_RS10430 PAJ_1887 PAJ_RS10430 2281446 2282960 - alpha-N-arabinofuranosidase gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10430 PAJ_RS10435 PAJ_1888 PAJ_RS10435 2283002 2284405 - symporter gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10435 PAJ_RS10440 PAJ_1889 PAJ_RS10440 2285136 2286389 + membrane protein gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10440 PAJ_RS10445 PAJ_RS10445 PAJ_RS10445 2286672 2286875 + hypothetical protein gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10445 PAJ_RS10450 PAJ_1890 PAJ_RS10450 2287060 2288712 - multidrug ABC transporter permease/ATP-binding protein efflux pump for the antibacterial peptide microcin J25 gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10450 PAJ_RS10455 PAJ_1891 PAJ_RS10455 2288797 2289438 - alpha-ketoglutarate-dependent dioxygenase AlkB gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10455 PAJ_RS10460 PAJ_1892 PAJ_RS10460 2289453 2290493 - FAD:protein FMN transferase gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10460 PAJ_RS10465 PAJ_RS10465 PAJ_RS10465 2290639 2290752 + hypothetical protein gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10465 PAJ_RS10470 PAJ_1893 PAJ_RS10470 2291083 2292210 - porin OmpC gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10470 PAJ_RS10475 PAJ_1894 PAJ_RS10475 2292797 2293963 - secretion protein HlyD gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10475 PAJ_RS10480 PAJ_1895 PAJ_RS10480 2293960 2296107 - cyclolysin secretion/processing ATP-binding protein CyaB gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10480 PAJ_RS10485 PAJ_1896 PAJ_RS10485 2296134 2297489 - type I secretion system outer membrane protein gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10485 PAJ_RS10490 PAJ_1897 PAJ_RS10490 2298151 2311308 - large repetitive protein YeeJ gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10490 PAJ_RS10495 PAJ_RS10495 PAJ_RS10495 2311785 2312006 + hypothetical protein gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10495 PAJ_RS10500 PAJ_1898 PAJ_RS10500 2312003 2313157 + MFS transporter gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10500 PAJ_RS10505 PAJ_1899 PAJ_RS10505 2313177 2315831 + phosphotransferase RcsD gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10505 PAJ_RS10510 PAJ_1900 PAJ_RS10510 2315833 2316483 + DNA-binding response regulator two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10510 PAJ_RS10515 PAJ_1901 PAJ_RS10515 2316523 2319372 - hybrid sensor histidine kinase/response regulator gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10515 PAJ_RS10520 PAJ_1902 PAJ_RS10520 2319590 2322232 - DNA gyrase subunit A gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10520 PAJ_RS10525 PAJ_1903 PAJ_RS10525 2322409 2323137 + bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase Involved in ubiquinone biosynthesis gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10525 PAJ_RS10530 PAJ_1904 PAJ_RS10530 2323597 2325882 + ribonucleotide-diphosphate reductase subunit alpha Catalyzes the rate-limiting step in dNTP synthesis gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10530 PAJ_RS10535 PAJ_1905 PAJ_RS10535 2325961 2327091 + ribonucleotide-diphosphate reductase subunit beta B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10535 PAJ_RS10540 PAJ_1906 PAJ_RS10540 2327094 2327354 + (2Fe-2S) ferredoxin plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor%2C essential for nucleotide reduction catalyzed by ribonucleotide reductases gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10540 PAJ_RS10545 PAJ_1907 PAJ_RS10545 2327592 2328788 - hypothetical protein gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10545 PAJ_RS10550 PAJ_1908 PAJ_RS10550 2329004 2329327 - membrane protein gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10550 PAJ_RS10555 PAJ_1909 mdoD mdoD 2329659 2331317 + glucan biosynthesis protein D involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10555 PAJ_RS10560 PAJ_1910 PAJ_RS10560 2331407 2331862 - acyltransferase gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10560 PAJ_RS10565 PAJ_1911 PAJ_RS10565 2331903 2332826 - hypothetical protein gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10565 PAJ_RS10570 PAJ_1912 PAJ_RS10570 2333027 2334484 - NADH:ubiquinone oxidoreductase subunit N Catalyzes the transfer of electrons from NADH to quinone gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10570 PAJ_RS10575 PAJ_1913 PAJ_RS10575 2334491 2336011 - NADH-quinone oxidoreductase subunit M gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10575 PAJ_RS10580 PAJ_1914 PAJ_RS10580 2336216 2338051 - NADH-quinone oxidoreductase subunit L Catalyzes the transfer of electrons from NADH to ubiquinone gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10580 PAJ_RS10585 PAJ_1915 PAJ_RS10585 2338048 2338350 - NADH-quinone oxidoreductase subunit K gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10585 PAJ_RS10590 PAJ_1916 PAJ_RS10590 2338347 2338898 - NADH:ubiquinone oxidoreductase subunit J Catalyzes the transfer of electrons from NADH to quinone gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10590 PAJ_RS10595 PAJ_1917 PAJ_RS10595 2338909 2339451 - NADH-quinone oxidoreductase subunit I gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10595 PAJ_RS10600 PAJ_1918 PAJ_RS10600 2339463 2340440 - NADH-quinone oxidoreductase subunit H gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10600 PAJ_RS10605 PAJ_1919 PAJ_RS10605 2340437 2343160 - NADH-quinone oxidoreductase subunit G Catalyzes the transfer of electrons from NADH to quinone gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10605 PAJ_RS10610 PAJ_1920 PAJ_RS10610 2343272 2344618 - NADH-quinone oxidoreductase subunit F part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10610 PAJ_RS10615 PAJ_1921 PAJ_RS10615 2344615 2345130 - NADH-quinone oxidoreductase subunit E Catalyzes the transfer of electrons from NADH to quinone gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10615 PAJ_RS10620 PAJ_1922 PAJ_RS10620 2345133 2346932 - NADH-quinone oxidoreductase subunit C/D NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10620 PAJ_RS10625 PAJ_1923 PAJ_RS10625 2347050 2347727 - NADH dehydrogenase subunit B gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10625 PAJ_RS10630 PAJ_1924 PAJ_RS10630 2347743 2348186 - NADH-quinone oxidoreductase subunit A gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10630 PAJ_RS10635 PAJ_1925 PAJ_RS10635 2348825 2349748 - transcriptional regulator LrhA involved in the regulation of genes involved in flagella synthesis%2C motility and chemotaxis gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10635 PAJ_RS10640 PAJ_1926 PAJ_RS10640 2350708 2351925 + aminotransferase AlaT broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10640 PAJ_RS10645 PAJ_1927 PAJ_RS10645 2351996 2352595 + 5'-deoxynucleotidase gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10645 PAJ_RS10650 PAJ_1928 PAJ_RS10650 2352624 2353283 - sugar phosphatase gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10650 PAJ_RS10655 PAJ_1929 PAJ_RS10655 2353297 2353791 - hypothetical protein gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10655 PAJ_RS10660 PAJ_1930 PAJ_RS10660 2353935 2354384 - hypothetical protein gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10660 PAJ_RS10665 PAJ_1931 PAJ_RS10665 2354718 2355920 + acetate kinase AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10665 PAJ_RS10670 PAJ_1932 PAJ_RS10670 2356005 2358134 + phosphate acetyltransferase catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10670 PAJ_RS10675 PAJ_1933 PAJ_RS10675 2358185 2359270 - spermidine/putrescine ABC transporter ATP-binding protein gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10675 PAJ_RS10680 PAJ_1934 PAJ_RS10680 2359536 2361029 - decarboxylase gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10680 PAJ_RS10685 PAJ_1935 PAJ_RS10685 2361148 2362410 + 4-aminobutyrate transaminase catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10685 PAJ_RS10690 PAJ_1936 PAJ_RS10690 2362527 2363552 + spermidine/putrescine ABC transporter substrate-binding protein gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10690 PAJ_RS10695 PAJ_1937 PAJ_RS10695 2363598 2364863 + polyamine ABC transporter substrate-binding protein gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10695 PAJ_RS10700 PAJ_1938 PAJ_RS10700 2364874 2365698 + polyamine ABC transporter permease gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10700 PAJ_RS10705 PAJ_1939 PAJ_RS10705 2365814 2366908 - alcohol dehydrogenase gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10705 PAJ_RS10710 PAJ_1940 PAJ_RS10710 2367016 2367816 + transcriptional regulator gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10710 PAJ_RS10715 PAJ_1941 PAJ_RS10715 2368014 2368538 - NUDIX hydrolase gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10715 PAJ_RS10720 PAJ_1942 PAJ_RS10720 2368649 2369290 - glutathione S-transferase catalyzes the formation of 2%2C4-dinitrophenyl-S-glutathione from 1-chloro-2%2C4-dinitrobenzene and glutathione gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10720 PAJ_RS10725 PAJ_1943 PAJ_RS10725 2369473 2370372 + epimerase gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10725 PAJ_RS10730 PAJ_1944 PAJ_RS10730 2370406 2371686 - cytochrome c biogenesis protein CcdA gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10730 PAJ_RS10735 PAJ_1945 PAJ_RS10735 2371721 2373184 - xylulokinase catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10735 PAJ_RS10740 PAJ_1946 PAJ_RS10740 2373194 2374585 - D-arabinitol 4-dehydrogenase gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10740 PAJ_RS10745 PAJ_1947 PAJ_RS10745 2374778 2375728 + DeoR family transcriptional regulator gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10745 PAJ_RS10750 PAJ_1948 PAJ_RS10750 2375734 2376507 - histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10750 PAJ_RS10755 PAJ_1949 PAJ_RS10755 2376516 2377232 - histidine/lysine/arginine/ornithine ABC transporter permease HisM with HisJPQ is involved in transport of histidine%2C lysine%2C arginine and ornithine gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10755 PAJ_RS10760 PAJ_1950 PAJ_RS10760 2377229 2377915 - histidine/lysine/arginine/ornithine ABC transporter permease HisQ with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10760 PAJ_RS10765 PAJ_1951 PAJ_RS10765 2378082 2378864 - amino acid ABC transporter substrate-binding protein with HisPMQ is involved in the transport of histidine gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10765 PAJ_RS10770 PAJ_1952 PAJ_RS10770 2379135 2379704 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10770 PAJ_RS10775 PAJ_1953 PAJ_RS10775 2379806 2381323 - amidophosphoribosyltransferase Catalyzes first step of the de novo purine nucleotide biosynthetic pathway gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10775 PAJ_RS10780 PAJ_1954 PAJ_RS10780 2381361 2381846 - colicin V production protein membrane protein required for colicin V production gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10780 PAJ_RS10785 PAJ_1955 PAJ_RS10785 2382112 2382903 - cell division protein DedD gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10785 PAJ_RS10790 PAJ_1956 PAJ_RS10790 2382893 2384161 - bifunctional tetrahydrofolate synthase/dihydrofolate synthase gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10790 PAJ_RS10795 PAJ_1957 PAJ_RS10795 2384253 2385167 - acetyl-CoA carboxylase subunit beta catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10795 PAJ_RS10800 PAJ_1958 PAJ_RS10800 2385329 2385979 - membrane protein gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10800 PAJ_RS10805 PAJ_1959 truA truA 2386005 2386808 - tRNA pseudouridine(38%2C39%2C40) synthase TruA mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10805 PAJ_RS10810 PAJ_1960 PAJ_RS10810 2386808 2387818 - aspartate-semialdehyde dehydrogenase gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10810 PAJ_RS10815 PAJ_1961 PAJ_RS10815 2387925 2389058 - erythronate-4-phosphate dehydrogenase catalyzes the formation of 3-hydroxy-2-oxo-4-phosphonooxybutanoate from erythronate-4-phosphate gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10815 PAJ_RS10820 PAJ_1962 PAJ_RS10820 2389208 2390107 + multidrug DMT transporter gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10820 PAJ_RS10825 PAJ_1963 PAJ_RS10825 2390088 2391476 - signal transduction histidine kinase gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10825 PAJ_RS10830 PAJ_1964 PAJ_RS10830 2391467 2392138 - transcriptional regulator transcriptional activator of tricarboxylate transport system genes gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10830 PAJ_RS10835 PAJ_1965 PAJ_RS10835 2392246 2393238 + tricarboxylic transport membrane protein gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10835 PAJ_RS10840 PAJ_RS10840 PAJ_RS10840 2393251 2393682 + membrane protein gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10840 PAJ_RS10845 PAJ_1967 PAJ_RS10845 2393694 2395196 + tripartite tricarboxylate transporter TctA gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10845 PAJ_RS10850 PAJ_1968 PAJ_RS10850 2395311 2396351 + flagella biosynthesis regulator gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10850 PAJ_RS10855 PAJ_RS10855 PAJ_RS10855 2396353 2396796 - rhodanese gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10855 PAJ_RS10860 PAJ_1969 PAJ_RS10860 2396885 2398324 + GntR family transcriptional regulator gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10860 PAJ_RS10865 PAJ_1970 PAJ_RS10865 2398417 2399637 - beta-ketoacyl-[acyl-carrier-protein] synthase I FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10865 PAJ_RS10870 PAJ_1971 mnmC mnmC 2399790 2401802 + bifunctional tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmD/FAD-dependent cmnm(5)s(2)U34 oxidoreductase MnmC 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10870 PAJ_RS10875 PAJ_1972 PAJ_RS10875 2401830 2402111 - hypothetical protein gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10875 PAJ_RS10880 PAJ_RS10880 PAJ_RS10880 2402146 2402691 - elongation factor P hydroxylase gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10880 PAJ_RS10885 PAJ_1974 PAJ_RS10885 2402712 2403515 - membrane protein gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10885 PAJ_RS10890 PAJ_1975 mepA mepA 2403524 2404342 - penicillin-insensitive murein endopeptidase D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10890 PAJ_RS10895 PAJ_1976 PAJ_RS10895 2404347 2405432 - chorismate synthase catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10895 PAJ_RS10900 PAJ_1977 PAJ_RS10900 2405479 2406411 - ribosomal protein L3 N(5)-glutamine methyltransferase involved in methylation of ribosomal protein L3 gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10900 PAJ_RS10905 PAJ_1979 PAJ_RS10905 2406572 2407120 + hypothetical protein gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10905 PAJ_RS10910 PAJ_1980 PAJ_RS10910 2407395 2409215 + methyl-accepting chemotaxis protein II Tar gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10910 PAJ_RS10915 PAJ_1981 PAJ_RS10915 2409293 2409775 - SixA gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10915 PAJ_RS10920 PAJ_1982 fadJ fadJ 2409977 2412097 - multifunctional fatty acid oxidation complex subunit alpha multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10920 PAJ_RS10925 PAJ_1984 PAJ_RS10925 2412097 2413407 - acetyl-CoA C-acyltransferase FadI gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10925 PAJ_RS10930 PAJ_1985 PAJ_RS10930 2413570 2413866 - hypothetical protein gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10930 PAJ_RS10935 PAJ_1986 PAJ_RS10935 2414225 2415502 + long-chain fatty acid transporter gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10935 PAJ_RS10940 PAJ_1987 PAJ_RS10940 2415669 2416433 - membrane protein involved in maintaining OM lipid asymmetry gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10940 PAJ_RS10945 PAJ_1988 PAJ_RS10945 2416565 2417776 - c-type cytochrome biogenesis protein CcmI gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10945 PAJ_RS10950 PAJ_1989 PAJ_RS10950 2417776 2418231 - cytochrome c gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10950 PAJ_RS10955 PAJ_1990 PAJ_RS10955 2418228 2418782 - thiol:disulfide interchange protein cytochrome c-type biogenesis thioredoxin%3B involved in the reduction of disulfide bonds to allow heme bonding gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10955 PAJ_RS10960 PAJ_1991 PAJ_RS10960 2418779 2420737 - c-type cytochrome biogenesis protein CcmF cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10960 PAJ_RS10965 PAJ_1992 PAJ_RS10965 2420734 2421219 - cytochrome c biogenesis protein CcmE CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10965 PAJ_RS10970 PAJ_1993 PAJ_RS10970 2421216 2421449 - heme exporter protein CcmD gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10970 PAJ_RS10975 PAJ_1994 PAJ_RS10975 2421446 2422186 - heme ABC transporter permease with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10975 PAJ_RS10980 PAJ_1995 PAJ_RS10980 2422241 2422900 - heme exporter protein CcmB with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10980 PAJ_RS10985 PAJ_1996 PAJ_RS10985 2422900 2423517 - heme ABC exporter ATP-binding protein CcmA gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10985 PAJ_RS10990 PAJ_1997 PAJ_RS10990 2423760 2424692 + membrane protein gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10990 PAJ_RS10995 PAJ_t0031 PAJ_RS10995 2424766 2424840 + tRNA-Arg tRNA gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS10995 PAJ_RS11000 PAJ_1998 PAJ_RS11000 2425124 2425942 + hypothetical protein gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11000 PAJ_RS11005 PAJ_RS11005 PAJ_RS11005 2425939 2426262 - hypothetical protein gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11005 PAJ_RS11010 PAJ_1999 PAJ_RS11010 2427020 2427733 - glycerophosphoryl diester phosphodiesterase gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11010 PAJ_RS11015 PAJ_2000 PAJ_RS11015 2427749 2428858 - ABC transporter ATP-binding protein gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11015 PAJ_RS11020 PAJ_2001 PAJ_RS11020 2428864 2429928 - ABC transporter permease gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11020 PAJ_RS11025 PAJ_2002 PAJ_RS11025 2429928 2430839 - ABC transporter permease gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11025 PAJ_RS11030 PAJ_2003 PAJ_RS11030 2430887 2432263 - hypothetical protein gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11030 PAJ_RS11035 PAJ_2004 PAJ_RS11035 2432324 2433514 + NagC family transcriptional regulator gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11035 PAJ_RS11040 PAJ_2005 PAJ_RS11040 2433716 2434573 - hypothetical protein gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11040 PAJ_RS11045 PAJ_2006 PAJ_RS11045 2434710 2435243 - minor fimbrial subunit YfcQ gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11045 PAJ_RS11050 PAJ_2007 PAJ_RS11050 2435277 2435780 - exotoxin gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11050 PAJ_RS11055 PAJ_2008 PAJ_RS11055 2435790 2436302 - exotoxin gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11055 PAJ_RS11060 PAJ_2009 PAJ_RS11060 2436292 2437086 - fimbrial protein StfD gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11060 PAJ_RS11065 PAJ_RS11065 PAJ_RS11065 2437065 2437739 - hypothetical protein gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11065 PAJ_RS11070 PAJ_RS11070 PAJ_RS11070 2437739 2437957 - hypothetical protein gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11070 PAJ_RS11075 PAJ_2010 PAJ_RS11075 2438119 2438673 - major fimbrial subunit protein precursor SmfA gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11075 PAJ_RS11080 PAJ_2011 PAJ_RS11080 2438673 2439293 - hypothetical protein gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11080 PAJ_RS11085 PAJ_2012 PAJ_RS11085 2439310 2440059 - fimbrial protein StfD gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11085 PAJ_RS11090 PAJ_2013 PAJ_RS11090 2440117 2442534 - fimbrial assembly protein gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11090 PAJ_RS11095 PAJ_2014 PAJ_RS11095 2442634 2443170 - PRS fimbrial minor pilin protein precursor PrsH gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11095 PAJ_RS11100 PAJ_2015 PAJ_RS11100 2443246 2443821 - SmfA gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11100 PAJ_RS11105 PAJ_2016 PAJ_RS11105 2444843 2445280 - hypothetical protein gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11105 PAJ_RS11110 PAJ_2017 PAJ_RS11110 2445268 2445801 - hypothetical protein gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11110 PAJ_RS11115 PAJ_RS11115 PAJ_RS11115 2446125 2446454 - hypothetical protein gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11115 PAJ_RS11120 PAJ_RS11120 PAJ_RS11120 2446838 2447077 - hypothetical protein gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11120 PAJ_RS11125 PAJ_2018 PAJ_RS11125 2447343 2448563 + membrane protein gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11125 PAJ_RS11130 PAJ_2019 PAJ_RS11130 2448596 2449471 - gluconolactonase gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11130 PAJ_RS11135 PAJ_RS11135 PAJ_RS11135 2449939 2450220 - hypothetical protein gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11135 PAJ_RS11140 PAJ_2020 PAJ_RS11140 2450478 2451287 - hypothetical protein gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11140 PAJ_RS11145 PAJ_RS11145 PAJ_RS11145 2451297 2451749 - hypothetical protein gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11145 PAJ_RS11150 PAJ_2021 PAJ_RS11150 2451757 2452542 - TtgV gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11150 PAJ_RS11155 PAJ_2022 PAJ_RS11155 2452693 2454264 + DSBA oxidoreductase gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11155 PAJ_RS11160 PAJ_2023 PAJ_RS11160 2454271 2455299 + DSBA oxidoreductase gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11160 PAJ_RS11165 PAJ_2024 PAJ_RS11165 2455620 2456855 - alanine transaminase gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11165 PAJ_RS11170 PAJ_2025 PAJ_RS11170 2456973 2457497 - N-acetyltransferase GCN5 gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11170 PAJ_RS11175 PAJ_2026 PAJ_RS11175 2457763 2459433 + membrane protein gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11175 PAJ_RS11180 PAJ_2027 PAJ_RS11180 2459430 2460158 + DNA-binding response regulator gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11180 PAJ_RS11185 PAJ_2028 glk glk 2460212 2461177 - glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11185 PAJ_RS11190 PAJ_2029 PAJ_RS11190 2461340 2462992 - indolepyruvate decarboxylase thiamindiphosphate-dependent%3B catalyzes the formation of indoleacetaldehyde from indolepyruvate gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11190 PAJ_RS11195 PAJ_2030 PAJ_RS11195 2463213 2464202 + glyceraldehyde 3-phosphate reductase gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11195 PAJ_RS11200 PAJ_2031 PAJ_RS11200 2464355 2464717 + hypothetical protein gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11200 PAJ_RS11205 PAJ_2032 PAJ_RS11205 2464773 2465450 - O-methyltransferase gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11205 PAJ_RS11210 PAJ_2033 PAJ_RS11210 2465568 2466809 - manganese transporter gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11210 PAJ_RS11215 PAJ_2034 PAJ_RS11215 2467171 2468361 + nucleoside permease gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11215 PAJ_RS11220 PAJ_RS11220 PAJ_RS11220 2468602 2468865 + transposase gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11220 PAJ_RS11225 PAJ_2035 PAJ_RS11225 2468898 2469722 + transposase gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11225 PAJ_RS11230 PAJ_2036 PAJ_RS11230 2469812 2470573 + hypothetical protein gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11230 PAJ_RS11235 PAJ_t0032 PAJ_RS11235 2470717 2470792 - tRNA-Ala tRNA gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11235 PAJ_RS11240 PAJ_t0033 PAJ_RS11240 2470839 2470914 - tRNA-Ala tRNA gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11240 PAJ_RS11245 PAJ_2037 PAJ_RS11245 2471275 2472036 + formate/nitrite transporter incomplete%3B partial in the middle of a contig%3B missing stop gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11245 PAJ_RS11250 PAJ_2038 PAJ_RS11250 2472177 2472530 + hypothetical protein gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11250 PAJ_RS11255 PAJ_2039 gltX gltX 2472652 2474070 - glutamate--tRNA ligase catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11255 PAJ_RS11260 PAJ_t0034 PAJ_RS11260 2474341 2474416 + tRNA-Val tRNA gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11260 PAJ_RS11265 PAJ_t0035 PAJ_RS11265 2474464 2474539 + tRNA-Val tRNA gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11265 PAJ_RS11270 PAJ_t0036 PAJ_RS11270 2474581 2474656 + tRNA-Val tRNA gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11270 PAJ_RS11275 PAJ_t0037 PAJ_RS11275 2474661 2474736 + tRNA-Lys tRNA gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11275 PAJ_RS11280 PAJ_RS11280 PAJ_RS11280 2474768 2474899 + RtT sRNA rtT sRNA%2C processed from tyrT transcript ncRNA gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11280 PAJ_RS11285 PAJ_2040 PAJ_RS11285 2475019 2475369 + hypothetical protein gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11285 PAJ_RS11290 PAJ_2041 PAJ_RS11290 2475366 2476286 - LysR family transcriptional regulator gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11290 PAJ_RS11295 PAJ_2042 PAJ_RS11295 2476382 2477389 + hypothetical protein gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11295 PAJ_RS11300 PAJ_2043 PAJ_RS11300 2477445 2477663 - hypothetical protein gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11300 PAJ_RS11305 PAJ_2044 ligA ligA 2477665 2479683 - DNA ligase (NAD(+)) LigA this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11305 PAJ_RS11310 PAJ_2045 PAJ_RS11310 2479751 2480749 - cell division protein ZipA gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11310 PAJ_RS11315 PAJ_2046 PAJ_RS11315 2480968 2481729 + sulfate transporter CysZ gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11315 PAJ_RS11320 PAJ_2047 PAJ_RS11320 2481875 2482843 + cysteine synthase A gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11320 PAJ_RS11325 PAJ_2048 PAJ_RS11325 2483232 2483489 + PTS sugar transporter gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11325 PAJ_RS11330 PAJ_2049 PAJ_RS11330 2483650 2485377 + phosphoenolpyruvate--protein phosphotransferase Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11330 PAJ_RS11335 PAJ_2050 PAJ_RS11335 2485420 2485920 + PTS glucose transporter subunit IIA phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11335 PAJ_RS11340 PAJ_2051 PAJ_RS11340 2485970 2487322 - two-component sensor histidine kinase gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11340 PAJ_RS11345 PAJ_2052 PAJ_RS11345 2487319 2487999 - DNA-binding response regulator gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11345 PAJ_RS11350 PAJ_2053 cysM cysM 2488179 2489060 - cysteine synthase B catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11350 PAJ_RS11355 PAJ_2054 PAJ_RS11355 2489179 2490267 - sulfate ABC transporter ATP-binding protein gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11355 PAJ_RS11360 PAJ_2055 cysW cysW 2490257 2491132 - sulfate/thiosulfate transporter permease subunit Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11360 PAJ_RS11365 PAJ_2056 PAJ_RS11365 2491132 2491965 - sulfate/thiosulfate transporter subunit gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11365 PAJ_RS11370 PAJ_2057 PAJ_RS11370 2491968 2492981 - thiosulfate transporter subunit gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11370 PAJ_RS11375 PAJ_2058 PAJ_RS11375 2493189 2493809 - DUF1131 domain-containing protein gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11375 PAJ_RS11380 PAJ_2059 PAJ_RS11380 2493875 2494336 - membrane protein gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11380 PAJ_RS11385 PAJ_2060 PAJ_RS11385 2494326 2494751 - GNAT family acetyltransferase gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11385 PAJ_RS11390 PAJ_2061 PAJ_RS11390 2494949 2495806 + N-acetylmuramoyl-L-alanine amidase gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11390 PAJ_RS11395 PAJ_2063 PAJ_RS11395 2495855 2496769 + coproporphyrinogen III oxidase catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11395 PAJ_RS11400 PAJ_2064 PAJ_RS11400 2496868 2499147 - MaeB NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11400 PAJ_RS11405 PAJ_2065 PAJ_RS11405 2499508 2500458 + transaldolase gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11405 PAJ_RS11410 PAJ_2066 PAJ_RS11410 2500522 2502522 + transketolase catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11410 PAJ_RS11415 PAJ_2067 PAJ_RS11415 2502745 2504106 - citrate/malate transporter CimH gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11415 PAJ_RS11420 PAJ_RS11420 PAJ_RS11420 2504072 2504317 + hypothetical protein gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11420 PAJ_RS11425 PAJ_2069 PAJ_RS11425 2504412 2506049 + histidine kinase gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11425 PAJ_RS11430 PAJ_2070 dpiA dpiA 2506039 2506725 + two-component system response regulator regulates the expression of citrate fermentation genes gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11430 PAJ_RS11435 PAJ_2071 PAJ_RS11435 2506932 2508101 + D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH this protein has no known enzymatic function gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11435 PAJ_RS11440 PAJ_2072 PAJ_RS11440 2508098 2509167 - hypothetical protein frameshifted gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11440 PAJ_RS11445 PAJ_RS11445 PAJ_RS11445 2509458 2509658 - hypothetical protein gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11445 PAJ_RS11450 PAJ_2073 PAJ_RS11450 2509657 2510487 + DeoR family transcriptional regulator gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11450 PAJ_RS11455 PAJ_2074 PAJ_RS11455 2510499 2511479 + ABC transporter substrate-binding protein gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11455 PAJ_RS11460 PAJ_2075 PAJ_RS11460 2511482 2512987 + sugar ABC transporter ATP-binding protein gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11460 PAJ_RS11465 PAJ_2076 PAJ_RS11465 2512980 2513969 + sugar ABC transporter permease gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11465 PAJ_RS11470 PAJ_2077 PAJ_RS11470 2513984 2515036 + sugar ABC transporter permease gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11470 PAJ_RS11475 PAJ_2078 PAJ_RS11475 2515036 2515728 + allulose-6-phosphate 3-epimerase gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11475 PAJ_RS11480 PAJ_2079 PAJ_RS11480 2515725 2516621 + D-allose kinase gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11480 PAJ_RS11485 PAJ_2080 PAJ_RS11485 2516618 2517577 + ribokinase RbsK gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11485 PAJ_RS11490 PAJ_2081 PAJ_RS11490 2517622 2518200 - GDP-mannose pyrophosphatase NudK gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11490 PAJ_RS11495 PAJ_2082 PAJ_RS11495 2518356 2519828 - amino acid permease involved in the transporte of L-asparagine gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11495 PAJ_RS11500 PAJ_2083 PAJ_RS11500 2520101 2520373 - hypothetical protein gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11500 PAJ_RS11505 PAJ_2084 PAJ_RS11505 2520627 2522315 + two-component system sensor histidine kinase NarQ gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11505 PAJ_RS11510 PAJ_2085 PAJ_RS11510 2522505 2523137 + DNA-binding response regulator nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11510 PAJ_RS11515 PAJ_2086 PAJ_RS11515 2523303 2526419 + multidrug efflux RND transporter permease subunit gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11515 PAJ_RS11520 PAJ_2087 PAJ_RS11520 2526996 2527364 + arsenate reductase gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11520 PAJ_RS11525 PAJ_2088 PAJ_RS11525 2527366 2528493 + succinyl-diaminopimelate desuccinylase gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11525 PAJ_RS11530 PAJ_RS11530 PAJ_RS11530 2528516 2528704 + membrane protein gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11530 PAJ_RS11535 PAJ_2089 PAJ_RS11535 2528740 2529420 - esterase gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11535 PAJ_RS11540 PAJ_2090 PAJ_RS11540 2529494 2531461 - methionine tRNA cytidine acetyltransferase cetylates the wobble base C34 of the elongation-specific methionine tRNA gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11540 PAJ_RS11545 PAJ_2091 PAJ_RS11545 2531458 2532321 - hypothetical protein gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11545 PAJ_RS11550 PAJ_2092 PAJ_RS11550 2532453 2533166 - phosphoribosylaminoimidazolesuccinocarboxamide synthase catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11550 PAJ_RS11555 PAJ_2094 PAJ_RS11555 2533313 2534344 - outer membrane protein assembly factor BamC gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11555 PAJ_RS11560 PAJ_2095 PAJ_RS11560 2534359 2535237 - 4-hydroxy-tetrahydrodipicolinate synthase gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11560 PAJ_RS11565 PAJ_2096 PAJ_RS11565 2535267 2535962 + glycine cleavage system transcriptional repressor gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11565 PAJ_RS11570 PAJ_2097 bcp bcp 2536105 2536572 + peroxiredoxin bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11570 PAJ_RS11575 PAJ_2098 PAJ_RS11575 2536610 2537680 - AI-2E family transporter gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11575 PAJ_RS11580 PAJ_2099 PAJ_RS11580 2537925 2539880 - hypothetical protein gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11580 PAJ_RS11585 PAJ_2100 PAJ_RS11585 2539891 2541291 - permease gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11585 PAJ_RS11590 PAJ_2101 PAJ_RS11590 2541539 2542357 + transcriptional regulator gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11590 PAJ_RS11595 PAJ_2102 PAJ_RS11595 2542410 2543990 - histidine kinase gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11595 PAJ_RS11600 PAJ_2103 PAJ_RS11600 2544146 2544976 - phosphodiesterase gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11600 PAJ_RS11605 PAJ_2104 PAJ_RS11605 2544988 2545974 - iron ABC transporter substrate-binding protein gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11605 PAJ_RS11610 PAJ_2105 PAJ_RS11610 2545971 2546786 - ABC transporter permease gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11610 PAJ_RS11615 PAJ_2106 PAJ_RS11615 2546783 2547664 - ABC transporter permease gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11615 PAJ_RS11620 PAJ_2107 PAJ_RS11620 2547664 2548686 - ABC transporter substrate-binding protein gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11620 PAJ_RS11625 PAJ_2108 PAJ_RS11625 2548670 2549695 - GntR family transcriptional regulator gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11625 PAJ_RS11630 PAJ_2109 PAJ_RS11630 2550048 2551511 + hypothetical protein gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11630 PAJ_RS11635 PAJ_2110 PAJ_RS11635 2551517 2551864 + arsenate reductase (glutaredoxin) gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11635 PAJ_RS11640 PAJ_2111 PAJ_RS11640 2551861 2552568 - DnaA regulatory inactivator Hda controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11640 PAJ_RS11645 PAJ_2112 PAJ_RS11645 2552670 2553953 - uracil/xanthine transporter gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11645 PAJ_RS11650 PAJ_2113 upp upp 2554113 2554739 - uracil phosphoribosyltransferase Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11650 PAJ_RS11655 PAJ_2114 PAJ_RS11655 2554969 2556009 + phosphoribosylformylglycinamidine cyclo-ligase catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11655 PAJ_RS11660 PAJ_2115 purN purN 2556006 2556644 + phosphoribosylglycinamide formyltransferase glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11660 PAJ_RS11665 PAJ_2116 pstB pstB 2556674 2557447 - phosphate ABC transporter ATP-binding protein ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11665 PAJ_RS11670 PAJ_2117 PAJ_RS11670 2557454 2559088 - phosphate ABC transporter%2C permease protein PstA gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11670 PAJ_RS11675 PAJ_2118 PAJ_RS11675 2559085 2561181 - phosphate ABC transporter permease gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11675 PAJ_RS11680 PAJ_2119 PAJ_RS11680 2561336 2563396 + RNA degradosome polyphosphate kinase gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11680 PAJ_RS11685 PAJ_2120 PAJ_RS11685 2563402 2564925 + exopolyphosphatase gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11685 PAJ_RS11690 PAJ_2121 PAJ_RS11690 2564967 2565566 + tellurite resistance methyltransferase TehB gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11690 PAJ_RS11695 PAJ_RS11695 PAJ_RS11695 2565665 2565850 + hypothetical protein gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11695 PAJ_RS11700 PAJ_2122 PAJ_RS11700 2565975 2567408 + magnesium transporter gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11700 PAJ_RS11705 PAJ_2123 PAJ_RS11705 2567409 2567912 - DNA-binding protein gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11705 PAJ_RS11710 PAJ_RS11710 PAJ_RS11710 2567909 2568178 - hypothetical protein gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11710 PAJ_RS11715 PAJ_RS11715 PAJ_RS11715 2568368 2568547 + hypothetical protein gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11715 PAJ_RS11720 PAJ_2124 PAJ_RS11720 2568665 2569438 - hypothetical protein gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11720 PAJ_RS11725 PAJ_RS11725 PAJ_RS11725 2569594 2569887 + hypothetical protein gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11725 PAJ_RS11730 PAJ_2125 PAJ_RS11730 2569891 2571861 - hypothetical protein gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11730 PAJ_RS11735 PAJ_2126 PAJ_RS11735 2572220 2573238 + alpha/beta hydrolase frameshifted gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11735 PAJ_RS11740 PAJ_2127 PAJ_RS11740 2573734 2574612 + permease gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11740 PAJ_RS11745 PAJ_RS11745 PAJ_RS11745 2574917 2575099 - addiction module antidote protein gene gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11745 PAJ_RS11750 PAJ_2128 PAJ_RS11750 2575136 2577790 - hypothetical protein gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11750 PAJ_RS11755 PAJ_2129 PAJ_RS11755 2577940 2578935 - hypothetical protein gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11755 PAJ_RS11760 PAJ_RS11760 PAJ_RS11760 2579034 2579399 - CopG family transcriptional regulator gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11760 PAJ_RS11765 PAJ_RS11765 PAJ_RS11765 2580169 2580393 + hypothetical protein gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11765 PAJ_RS11770 PAJ_2130 PAJ_RS11770 2580664 2581458 + P-type conjugative transfer protein TrbJ gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11770 PAJ_RS11775 PAJ_RS11775 PAJ_RS11775 2581461 2581649 + hypothetical protein gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11775 PAJ_RS11780 PAJ_2131 PAJ_RS11780 2581652 2583232 + P-type conjugative transfer protein TrbL gene gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11780 PAJ_RS11785 PAJ_RS11785 PAJ_RS11785 2583238 2583558 + hypothetical protein gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11785 PAJ_RS11790 PAJ_2132 PAJ_RS11790 2583946 2584845 - replication protein C gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11790 PAJ_RS11795 PAJ_2133 PAJ_RS11795 2584832 2585698 - replication protein A gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11795 PAJ_RS11800 PAJ_RS11800 PAJ_RS11800 2585702 2585932 - DNA-binding protein gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11800 PAJ_RS11805 PAJ_2134 PAJ_RS11805 2586217 2587425 - integrase gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11805 PAJ_RS11810 PAJ_2135 guaA guaA 2587734 2589314 - GMP synthetase contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11810 PAJ_RS11815 PAJ_2137 PAJ_RS11815 2589384 2590850 - IMP dehydrogenase gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11815 PAJ_RS11820 PAJ_2138 xseA xseA 2591019 2592392 + exodeoxyribonuclease VII large subunit bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11820 PAJ_RS11825 PAJ_2139 PAJ_RS11825 2592433 2593446 + peptidase M4 gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11825 PAJ_RS11830 PAJ_RS11830 PAJ_RS11830 2593443 2593775 + hypothetical protein gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11830 PAJ_RS11835 PAJ_2140 PAJ_RS11835 2593826 2596267 - quinate dehydrogenase gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11835 PAJ_RS11840 PAJ_RS11840 PAJ_RS11840 2596647 2596838 + hypothetical protein gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11840 PAJ_RS11845 PAJ_2141 PAJ_RS11845 2596886 2598370 - ribosome biogenesis GTPase Der gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11845 PAJ_RS11850 PAJ_2142 PAJ_RS11850 2598544 2599725 - outer membrane protein assembly factor BamB gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11850 PAJ_RS11855 PAJ_2143 PAJ_RS11855 2599745 2600362 - membrane protein gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11855 PAJ_RS11860 PAJ_2144 hisS hisS 2600401 2601675 - histidine--tRNA ligase catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11860 PAJ_RS11865 PAJ_2145 PAJ_RS11865 2601781 2602902 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11865 PAJ_RS11870 PAJ_2146 PAJ_RS11870 2602942 2603943 - cytoskeleton protein RodZ gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11870 PAJ_RS11875 PAJ_2147 PAJ_RS11875 2603933 2604664 - type IV pilus biogenesis/stability protein PilW gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11875 PAJ_RS11880 PAJ_2148 PAJ_RS11880 2604746 2605915 - bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11880 PAJ_RS11885 PAJ_2149 PAJ_RS11885 2606099 2606530 - nucleoside-diphosphate kinase catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11885 PAJ_RS11890 PAJ_2150 PAJ_RS11890 2606707 2609034 - penicillin-binding protein 1C penicillin-insensitive transglycosylase/transpeptidase gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11890 PAJ_RS11895 PAJ_2151 PAJ_RS11895 2609047 2613945 - hypothetical protein gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11895 PAJ_RS11900 PAJ_2152 sseA sseA 2614091 2614934 + 3-mercaptopyruvate sulfurtransferase catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds%3B frameshifted gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11900 PAJ_RS11905 PAJ_2153 PAJ_RS11905 2614968 2615732 - protein SseB enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11905 PAJ_RS11910 PAJ_2154 PAJ_RS11910 2615784 2617070 - aminopeptidase PepB catalyzes the removal of an N-terminal amino acid from a peptide or arylamide gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11910 PAJ_RS11915 PAJ_2155 PAJ_RS11915 2617198 2618358 - cysteine desulfurase IscS catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11915 PAJ_RS11920 PAJ_2157 PAJ_RS11920 2618448 2618945 - Fe-S cluster assembly transcriptional regulator IscR gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11920 PAJ_RS11925 PAJ_2158 PAJ_RS11925 2619082 2619828 - tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11925 PAJ_RS11930 PAJ_2159 PAJ_RS11930 2619951 2620754 + inositol monophosphatase gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11930 PAJ_RS11935 PAJ_2161 PAJ_RS11935 2620802 2621815 - hypothetical protein gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11935 PAJ_RS11940 PAJ_2162 PAJ_RS11940 2622011 2622991 - nickel transporter gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11940 PAJ_RS11945 PAJ_2163 PAJ_RS11945 2622982 2623608 - membrane protein gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11945 PAJ_RS11950 PAJ_2164 PAJ_RS11950 2623764 2625032 + stationary phase inducible protein CsiE gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11950 PAJ_RS11955 PAJ_2165 PAJ_RS11955 2625014 2626162 - 3-phenylpropionic acid transporter transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11955 PAJ_RS11960 PAJ_2166 PAJ_RS11960 2626293 2627546 - serine hydroxymethyltransferase gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11960 PAJ_RS11965 PAJ_2167 PAJ_RS11965 2627872 2629056 + nitric oxide dioxygenase flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11965 PAJ_RS11970 PAJ_2168 PAJ_RS11970 2629261 2629599 - nitrogen regulatory protein P-II indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11970 PAJ_RS11975 PAJ_2169 PAJ_RS11975 2629689 2631023 - two-component system response regulator GlrR with GlrK is part of a two-component signal transduction system regulating glmY gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11975 PAJ_RS11980 PAJ_2170 PAJ_RS11980 2631023 2631694 - hypothetical protein gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11980 PAJ_RS11985 PAJ_2171 PAJ_RS11985 2631698 2633125 - two-component sensor histidine kinase part of the GlrKR two-component signal transduction system involved in the regulation of glmY gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11985 PAJ_RS11990 PAJ_2172 PAJ_RS11990 2633692 2637582 - phosphoribosylformylglycinamidine synthase catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11990 PAJ_RS11995 PAJ_2174 PAJ_RS11995 2637850 2639307 + lytic transglycosylase F gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS11995 PAJ_RS12000 PAJ_RS12000 PAJ_RS12000 2639304 2639773 - tRNA adenosine(34) deaminase TadA frameshifted gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12000 PAJ_RS12005 PAJ_2176 PAJ_RS12005 2639874 2640512 - phosphatidylglycerophosphatase C gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12005 PAJ_RS12010 PAJ_2177 PAJ_RS12010 2640668 2641507 + transcriptional regulator gene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12010 PAJ_RS12015 PAJ_2178 PAJ_RS12015 2641838 2642086 + ferredoxin gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12015 PAJ_RS12020 PAJ_2179 acpS acpS 2642083 2642463 - holo-ACP synthase Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12020 PAJ_RS12025 PAJ_2180 PAJ_RS12025 2642463 2643194 - pyridoxine 5'-phosphate synthase involved in the de novo synthesis of pyridoxine (Vitamin B6) gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12025 PAJ_RS12030 PAJ_2182 recO recO 2643261 2643998 - DNA repair protein RecO involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA gene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12030 PAJ_RS12035 PAJ_2183 PAJ_RS12035 2644003 2644908 - GTPase Era gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12035 PAJ_RS12040 PAJ_2184 rnc rnc 2644953 2645633 - ribonuclease 3 cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12040 PAJ_RS12045 PAJ_2185 PAJ_RS12045 2645765 2646739 - S26 family signal peptidase catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12045 PAJ_RS12050 PAJ_2186 PAJ_RS12050 2646749 2648548 - elongation factor 4 gene gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12050 PAJ_RS12055 PAJ_2187 PAJ_RS12055 2648768 2649232 - SoxR reducing system protein RseC involved in the reduction of the SoxR iron-sulfur cluster gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12055 PAJ_RS12060 PAJ_2188 rseB rseB 2649229 2650185 - sigma-E factor regulatory protein RseB periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12060 PAJ_RS12065 PAJ_2189 PAJ_RS12065 2650185 2650838 - anti-RNA polymerase sigma factor SigE gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12065 PAJ_RS12070 PAJ_2190 PAJ_RS12070 2650865 2651443 - RNA polymerase sigma factor RpoE Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12070 PAJ_RS12075 PAJ_2191 PAJ_RS12075 2651815 2653476 + L-aspartate oxidase catalyzes the formation of oxaloacetate from L-aspartate gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12075 PAJ_RS12080 PAJ_2192 PAJ_RS12080 2653458 2654210 - SAM-dependent methyltransferase gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12080 PAJ_RS12085 PAJ_2193 PAJ_RS12085 2654378 2655706 + RNA helicase facilitates an early step in the assembly of the 50S subunit of the ribosome gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12085 PAJ_RS12090 PAJ_2194 PAJ_RS12090 2655915 2656298 - autonomous glycyl radical cofactor GrcA stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12090 PAJ_RS12095 PAJ_2195 PAJ_RS12095 2656555 2657235 + uracil-DNA glycosylase Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12095 PAJ_RS12100 PAJ_2196 PAJ_RS12100 2657294 2657875 - nucleotide exchange factor GrpE with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12100 PAJ_RS12105 PAJ_2197 ppnK ppnK 2657998 2658876 + NAD(+) kinase catalyzes the phosphorylation of NAD to NADP gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12105 PAJ_RS12110 PAJ_2198 PAJ_RS12110 2658961 2660622 + DNA repair protein RecN gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12110 PAJ_RS12115 PAJ_2199 PAJ_RS12115 2660809 2661159 + outer membrane biogenesis protein BamE gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12115 PAJ_RS12120 PAJ_2200 PAJ_RS12120 2661291 2661584 - RnfH family protein gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12120 PAJ_RS12125 PAJ_2201 PAJ_RS12125 2661577 2662011 - ubiquinone-binding protein gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12125 PAJ_RS12130 PAJ_2202 smpB smpB 2662170 2662652 + SsrA-binding protein binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12130 PAJ_RS12135 PAJ_RS12135 ssrA ssrA 2662696 2663058 + transfer-messenger RNA tmRNA gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12135 PAJ_RS12140 PAJ_2203 PAJ_RS12140 2663182 2664453 + integrase gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12140 PAJ_RS12145 PAJ_2204 PAJ_RS12145 2664596 2665621 - hypothetical protein gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12145 PAJ_RS12150 PAJ_2205 PAJ_RS12150 2665623 2666555 - ATP-binding protein gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12150 PAJ_RS12155 PAJ_2206 PAJ_RS12155 2666562 2667464 - hypothetical protein gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12155 PAJ_RS12160 PAJ_RS12160 PAJ_RS12160 2667951 2668247 + hypothetical protein gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12160 PAJ_RS12165 PAJ_2207 PAJ_RS12165 2668295 2669218 + hypothetical protein gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12165 PAJ_RS12170 PAJ_RS12170 PAJ_RS12170 2669464 2669730 + transposase gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12170 PAJ_RS12175 PAJ_2208 PAJ_RS12175 2669781 2670575 + transposase gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12175 PAJ_RS12180 PAJ_2209 PAJ_RS12180 2670825 2672993 - hypothetical protein gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12180 PAJ_RS12185 PAJ_RS12185 PAJ_RS12185 2674135 2675132 + glycosyl transferase frameshifted gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12185 PAJ_RS12190 PAJ_RS12190 PAJ_RS12190 2675134 2675388 + hypothetical protein gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12190 PAJ_RS12195 PAJ_2211 PAJ_RS12195 2675410 2676096 - hypothetical protein gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12195 PAJ_RS12200 PAJ_2212 PAJ_RS12200 2676108 2678858 - hypothetical protein gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12200 PAJ_RS12205 PAJ_2213 PAJ_RS12205 2678858 2681518 - hypothetical protein gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12205 PAJ_RS12210 PAJ_RS12210 PAJ_RS12210 2681698 2681970 - hypothetical protein gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12210 PAJ_RS12215 PAJ_RS12215 PAJ_RS12215 2682017 2682436 + hypothetical protein gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12215 PAJ_RS12220 PAJ_RS12220 PAJ_RS12220 2682451 2682910 + hypothetical protein frameshifted gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12220 PAJ_RS12225 PAJ_RS12225 PAJ_RS12225 2682927 2683217 + hypothetical protein internal stop gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12225 PAJ_RS12230 PAJ_RS12230 PAJ_RS12230 2683284 2683661 + toxin CbtA gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12230 PAJ_RS12235 PAJ_2215 PAJ_RS12235 2684109 2684726 + transcriptional regulator gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12235 PAJ_RS12240 PAJ_2216 PAJ_RS12240 2684891 2685787 + soluble epoxide hydrolase MhpC gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12240 PAJ_RS12245 PAJ_2217 PAJ_RS12245 2686462 2688669 + colicin I receptor gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12245 PAJ_RS12250 PAJ_2218 PAJ_RS12250 2688899 2689843 + iron ABC transporter substrate-binding protein gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12250 PAJ_RS12255 PAJ_2219 PAJ_RS12255 2689840 2690799 + iron ABC transporter permease gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12255 PAJ_RS12260 PAJ_2220 PAJ_RS12260 2690789 2691781 + enterobactin ABC transporter permease gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12260 PAJ_RS12265 PAJ_2221 PAJ_RS12265 2691778 2692536 + iron ABC transporter ATP-binding protein gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12265 PAJ_RS12270 PAJ_2222 PAJ_RS12270 2692657 2693373 - IclR family transcriptional regulator gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12270 PAJ_RS12275 PAJ_2223 PAJ_RS12275 2693549 2694241 + diguanylate cyclase gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12275 PAJ_RS12280 PAJ_2224 PAJ_RS12280 2694241 2695179 + 3-phosphoglycerate dehydrogenase gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12280 PAJ_RS12285 PAJ_2225 PAJ_RS12285 2695176 2696108 + gluconolactonase gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12285 PAJ_RS12290 PAJ_2226 PAJ_RS12290 2696147 2697499 + MFS transporter gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12290 PAJ_RS12295 PAJ_2227 PAJ_RS12295 2697623 2698963 - membrane protein gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12295 PAJ_RS12300 PAJ_RS12300 PAJ_RS12300 2698985 2699254 + hypothetical protein gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12300 PAJ_RS12305 PAJ_2228 PAJ_RS12305 2699686 2700519 - beta-1%2C4-xylanase gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12305 PAJ_RS12310 PAJ_2229 PAJ_RS12310 2701148 2701816 + hypothetical protein gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12310 PAJ_RS12315 PAJ_2230 PAJ_RS12315 2702009 2703022 - NADPH:quinone oxidoreductase gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12315 PAJ_RS12320 PAJ_2231 PAJ_RS12320 2703125 2703523 + HxlR family transcriptional regulator gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12320 PAJ_RS12325 PAJ_2232 PAJ_RS12325 2703711 2704826 - hypothetical protein gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12325 PAJ_RS12330 PAJ_2233 PAJ_RS12330 2704901 2705500 - NAD(P)H oxidoreductase YcaK gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12330 PAJ_RS12335 PAJ_2234 PAJ_RS12335 2705598 2706503 + LysR family transcriptional regulator gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12335 PAJ_RS12340 PAJ_2235 PAJ_RS12340 2706493 2708376 - sigma-54-dependent Fis family transcriptional regulator gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12340 PAJ_RS12345 PAJ_2236 PAJ_RS12345 2708520 2709683 - hydrolase gene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12345 PAJ_RS12350 PAJ_2237 PAJ_RS12350 2709697 2711091 - anion transporter gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12350 PAJ_RS12355 PAJ_2238 PAJ_RS12355 2711167 2711865 - dimethylmenaquinone methyltransferase gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12355 PAJ_RS12360 PAJ_2239 PAJ_RS12360 2711867 2712826 - hydroxyacid dehydrogenase gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12360 PAJ_RS12365 PAJ_2240 PAJ_RS12365 2713650 2714753 + porin gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12365 PAJ_RS12370 PAJ_2241 PAJ_RS12370 2714839 2715267 + aldehyde-activating protein gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12370 PAJ_RS12375 PAJ_2242 PAJ_RS12375 2715435 2718536 - multidrug efflux RND transporter permease subunit gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12375 PAJ_RS12380 PAJ_RS12380 PAJ_RS12380 2718683 2718970 - hypothetical protein gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12380 PAJ_RS12385 PAJ_2243 PAJ_RS12385 2719219 2719758 + N-acetyltransferase GCN5 gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12385 PAJ_RS12390 PAJ_2244 PAJ_RS12390 2719959 2720657 + DNA-binding response regulator gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12390 PAJ_RS12395 PAJ_2245 PAJ_RS12395 2720654 2721721 + histidine kinase gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12395 PAJ_RS12400 PAJ_2246 PAJ_RS12400 2721718 2722662 - glycosyl transferase gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12400 PAJ_RS12405 PAJ_RS12405 PAJ_RS12405 2722736 2723089 + hypothetical protein gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12405 PAJ_RS12410 PAJ_2247 PAJ_RS12410 2723236 2724234 + ABC transporter substrate-binding protein gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12410 PAJ_RS12415 PAJ_2248 PAJ_RS12415 2724234 2725271 + ABC transporter permease gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12415 PAJ_RS12420 PAJ_2249 PAJ_RS12420 2725271 2726032 + sugar ABC transporter substrate-binding protein gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12420 PAJ_RS12425 PAJ_RS12425 PAJ_RS12425 2726429 2726800 - hypothetical protein gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12425 PAJ_RS12430 PAJ_2250 PAJ_RS12430 2726976 2727449 - hypothetical protein gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12430 PAJ_RS12435 PAJ_2251 PAJ_RS12435 2727436 2728221 - transcriptional regulator gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12435 PAJ_RS12440 PAJ_2252 PAJ_RS12440 2728694 2731396 - magnesium-translocating P-type ATPase P-type%3B involved in magnesium transport into the cytoplasm gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12440 PAJ_RS12445 PAJ_2253 PAJ_RS12445 2732045 2733619 + ABC transporter substrate-binding protein gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12445 PAJ_RS12450 PAJ_2254 PAJ_RS12450 2733619 2734671 + peptide ABC transporter permease gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12450 PAJ_RS12455 PAJ_2255 PAJ_RS12455 2734668 2735525 + peptide ABC transporter permease gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12455 PAJ_RS12460 PAJ_2256 PAJ_RS12460 2735515 2736345 + peptide ABC transporter ATP-binding protein gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12460 PAJ_RS12465 PAJ_2257 PAJ_RS12465 2736338 2737021 + ABC transporter ATP-binding protein gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12465 PAJ_RS12470 PAJ_2258 PAJ_RS12470 2737035 2737580 + spermidine N1-acetyltransferase catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12470 PAJ_RS12475 PAJ_RS12475 PAJ_RS12475 2737581 2738000 - hypothetical protein gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12475 PAJ_RS12480 PAJ_2259 PAJ_RS12480 2738097 2739032 - homocysteine S-methyltransferase gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12480 PAJ_RS12485 PAJ_2260 PAJ_RS12485 2739022 2740428 - amino acid transporter gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12485 PAJ_RS12490 PAJ_2261 PAJ_RS12490 2740565 2740900 - hypothetical protein gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12490 PAJ_RS12495 PAJ_2262 PAJ_RS12495 2741052 2741369 + membrane protein gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12495 PAJ_RS12500 PAJ_2263 PAJ_RS12500 2741662 2741904 + NrdH-redoxin gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12500 PAJ_RS12505 PAJ_2264 nrdI nrdI 2741909 2742322 + ribonucleotide reductase assembly protein NrdI in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12505 PAJ_RS12510 PAJ_2265 PAJ_RS12510 2742349 2744430 + ribonucleoside-diphosphate reductase subunit alpha Catalyzes the rate-limiting step in dNTP synthesis gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12510 PAJ_RS12515 PAJ_2266 PAJ_RS12515 2744440 2745399 + ribonucleotide-diphosphate reductase subunit beta B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12515 PAJ_RS12520 PAJ_2267 PAJ_RS12520 2745768 2746967 + glycine betaine/L-proline ABC transporter ATP-binding protein with ProWX is involved in the high-affinity uptake of glycine betaine gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12520 PAJ_RS12525 PAJ_2268 PAJ_RS12525 2746960 2748111 + proline/betaine ABC transporter permease ProW with ProVX is involved in the high-affinity uptake of glycine betaine gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12525 PAJ_RS12530 PAJ_2269 proX proX 2748171 2749169 + glycine betaine ABC transporter substrate-binding protein with ProVW%2C part of the high-affinity transport system for the osmoprotectant glycine betaine gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12530 PAJ_RS12535 PAJ_2270 PAJ_RS12535 2749316 2750515 + transporter gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12535 PAJ_RS12540 PAJ_2272 PAJ_RS12540 2750786 2751316 + transcriptional regulator DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12540 PAJ_RS12545 PAJ_2273 PAJ_RS12545 2751465 2752637 + multidrug export protein EmrA with ErmA and TolC forms a multidrug efflux system gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12545 PAJ_RS12550 PAJ_2274 emrB emrB 2752654 2754190 + multidrug resistance protein B multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid%3B frameshifted gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12550 PAJ_RS12555 PAJ_2275 PAJ_RS12555 2754242 2755294 - zinc-binding dehydrogenase gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12555 PAJ_RS12560 PAJ_2276 PAJ_RS12560 2755407 2755814 + transcriptional regulator gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12560 PAJ_RS12565 PAJ_2277 PAJ_RS12565 2755898 2757016 - tRNA/rRNA methyltransferase gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12565 PAJ_RS12570 PAJ_2278 PAJ_RS12570 2757176 2757595 + thiol disulfide reductase thioredoxin gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12570 PAJ_RS12575 PAJ_2279 PAJ_RS12575 2757678 2758358 + DTW domain-containing protein gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12575 PAJ_RS12580 PAJ_2280 PAJ_RS12580 2758467 2761142 + protein acetyltransferase catalyzes the acetylation of lysine gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12580 PAJ_RS12585 PAJ_2281 pssA pssA 2761242 2762597 + phosphatidylserine synthase catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12585 PAJ_RS12590 PAJ_2282 PAJ_RS12590 2762642 2763937 - alpha-ketoglutarate transporter gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12590 PAJ_RS12595 PAJ_2283 PAJ_RS12595 2764174 2765214 - alcohol dehydrogenase gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12595 PAJ_RS12600 PAJ_2284 PAJ_RS12600 2765336 2765809 + AsnC family transcriptional regulator gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12600 PAJ_RS12605 PAJ_r0004 rrf rrf 2766392 2766507 - 5S ribosomal RNA rRNA gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12605 PAJ_RS12610 PAJ_r0005 PAJ_RS12610 2766696 2769632 - 23S ribosomal RNA rRNA gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12610 PAJ_RS12615 PAJ_t0038 PAJ_RS12615 2769830 2769905 - tRNA-Ala tRNA gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12615 PAJ_RS12620 PAJ_t0039 PAJ_RS12620 2770048 2770124 - tRNA-Ile tRNA gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12620 PAJ_RS12625 PAJ_r0006 PAJ_RS12625 2770192 2771741 - 16S ribosomal RNA rRNA gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12625 PAJ_RS12630 PAJ_2285 PAJ_RS12630 2772216 2774789 - protein disaggregation chaperone gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12630 PAJ_RS12635 PAJ_2287 PAJ_RS12635 2774915 2775643 - membrane protein gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12635 PAJ_RS12640 PAJ_2288 rluD rluD 2775640 2776620 - 23S rRNA pseudouridine(1911/1915/1917) synthase responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12640 PAJ_RS12645 PAJ_2289 PAJ_RS12645 2776750 2777481 + outer membrane biogenesis protein BamD gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12645 PAJ_RS12650 PAJ_2290 PAJ_RS12650 2777759 2778091 + ribosomal subunit interface protein associated with 30S ribosomal subunit%3B interferes with translation elongation gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12650 PAJ_RS12655 PAJ_2291 pheA pheA 2778338 2779501 + bifunctional chorismate mutase/prephenate dehydratase catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12655 PAJ_RS12660 PAJ_2292 tyrA tyrA 2779538 2780659 - bifunctional chorismate mutase/prephenate dehydrogenase catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12660 PAJ_RS12665 PAJ_2293 PAJ_RS12665 2780666 2781745 - phospho-2-dehydro-3-deoxyheptonate aldolase catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12665 PAJ_RS12670 PAJ_2294 PAJ_RS12670 2782031 2782561 + hypothetical protein gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12670 PAJ_RS12675 PAJ_RS12675 PAJ_RS12675 2782580 2783134 - hypothetical protein gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12675 PAJ_RS12680 PAJ_2295 PAJ_RS12680 2783430 2783777 - 50S ribosomal protein L19 gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12680 PAJ_RS12685 PAJ_2296 trmD trmD 2783820 2784581 - tRNA (guanosine(37)-N1)-methyltransferase TrmD methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12685 PAJ_RS12690 PAJ_2297 rimM rimM 2784617 2785165 - ribosome maturation factor RimM Essential for efficient processing of 16S rRNA gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12690 PAJ_RS12695 PAJ_2298 PAJ_RS12695 2785184 2785432 - 30S ribosomal protein S16 gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12695 PAJ_RS12700 PAJ_2299 PAJ_RS12700 2785575 2786936 - signal recognition particle protein gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12700 PAJ_RS12705 PAJ_2300 PAJ_RS12705 2787126 2787923 + membrane protein gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12705 PAJ_RS12710 PAJ_2301 PAJ_RS12710 2787941 2789227 + membrane protein gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12710 PAJ_RS12715 PAJ_2302 PAJ_RS12715 2789410 2789925 - S-ribosylhomocysteinase catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2 gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12715 PAJ_RS12720 PAJ_2303 PAJ_RS12720 2790077 2791681 - glutamate--cysteine ligase involved in the first step of glutathione biosynthesis gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12720 PAJ_RS12725 PAJ_2304 PAJ_RS12725 2791713 2792141 - membrane protein gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12725 PAJ_RS12730 PAJ_2305 PAJ_RS12730 2792138 2792704 - 6-phosphogluconate phosphatase YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate (pNPP)%3B presents beta-phosphoglucomutase activity at a lower extent gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12730 PAJ_RS12735 PAJ_t0040 PAJ_RS12735 2793305 2793381 - tRNA-Arg tRNA gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12735 PAJ_RS12740 PAJ_t0041 PAJ_RS12740 2793703 2793779 - tRNA-Arg tRNA gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12740 PAJ_RS12745 PAJ_t0042 PAJ_RS12745 2793969 2794045 - tRNA-Arg tRNA gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12745 PAJ_RS12750 PAJ_t0043 PAJ_RS12750 2794180 2794256 - tRNA-Arg tRNA gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12750 PAJ_RS12755 PAJ_t0044 PAJ_RS12755 2794265 2794357 - tRNA-Ser tRNA gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12755 PAJ_RS12760 PAJ_2306 PAJ_RS12760 2794641 2794826 - carbon storage regulator affects carbohydrate metabolism%3B has regulatory role in many processes gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12760 PAJ_RS12765 PAJ_2307 PAJ_RS12765 2795077 2797704 - alanine--tRNA ligase gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12765 PAJ_RS12770 PAJ_2308 PAJ_RS12770 2797836 2798291 - RecX family transcriptional regulator gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12770 PAJ_RS12775 PAJ_2309 recA recA 2798462 2799532 - DNA recombination/repair protein RecA catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12775 PAJ_RS12780 PAJ_2310 PAJ_RS12780 2799628 2800122 - hypothetical protein gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12780 PAJ_RS12785 PAJ_2311 PAJ_RS12785 2800223 2800999 - trans-aconitate 2-methyltransferase catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12785 PAJ_RS12790 PAJ_2312 PAJ_RS12790 2801183 2801518 - hypothetical protein gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12790 PAJ_RS12795 PAJ_2313 PAJ_RS12795 2801594 2802676 - murein transglycosylase B membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12795 PAJ_RS12800 PAJ_2314 PAJ_RS12800 2803018 2805579 + DNA mismatch repair protein MutS This protein performs the mismatch recognition step during the DNA repair process gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12800 PAJ_RS12805 PAJ_2315 PAJ_RS12805 2805805 2806281 + DNA-binding protein gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12805 PAJ_RS12810 PAJ_2316 PAJ_RS12810 2806330 2807067 + hypothetical protein gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12810 PAJ_RS12815 PAJ_2317 PAJ_RS12815 2807131 2808123 - RNA polymerase sigma factor RpoS sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12815 PAJ_RS12820 PAJ_2318 PAJ_RS12820 2808175 2809290 - lipoprotein NlpD gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12820 PAJ_RS12825 PAJ_2319 pcm pcm 2809456 2810082 - protein-L-isoaspartate O-methyltransferase catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12825 PAJ_RS12830 PAJ_2320 surE surE 2810076 2810837 - 5'/3'-nucleotidase SurE broad specificity 5'(3')-nucleotidase and polyphosphatase gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12830 PAJ_RS12835 PAJ_2321 truD truD 2811120 2812160 - tRNA pseudouridine synthase TruD catalyzes the modification of U13 in tRNA(Glu) gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12835 PAJ_RS12840 PAJ_2322 ispF ispF 2812157 2812639 - 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12840 PAJ_RS12845 PAJ_2323 PAJ_RS12845 2812639 2813355 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12845 PAJ_RS12850 PAJ_2324 ftsB ftsB 2813359 2813676 - cell division protein FtsB forms a complex with FtsL and FtsQ%3B colocalizes to the septal region of the dividing cell%3B membrane protein gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12850 PAJ_RS12855 PAJ_2325 PAJ_RS12855 2813845 2814165 - membrane protein gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12855 PAJ_RS12860 PAJ_2326 PAJ_RS12860 2814221 2814826 - adenylyl-sulfate kinase converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12860 PAJ_RS12865 PAJ_2327 cysN cysN 2814826 2816253 - sulfate adenylyltransferase may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12865 PAJ_RS12870 PAJ_2328 PAJ_RS12870 2816265 2817176 - sulfate adenylyltransferase subunit 2 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP gene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12870 PAJ_RS12875 PAJ_2329 PAJ_RS12875 2817188 2818603 - siroheme synthase gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12875 PAJ_RS12880 PAJ_2331 PAJ_RS12880 2818857 2819867 + Zn-dependent exopeptidase M28 catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3 gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12880 PAJ_RS12885 PAJ_RS12885 PAJ_RS12885 2819877 2820161 + hypothetical protein gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12885 PAJ_RS12890 PAJ_2332 PAJ_RS12890 2820229 2820981 - transcriptional regulator KipR gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12890 PAJ_RS12895 PAJ_2333 PAJ_RS12895 2821344 2821736 + reactive intermediate/imine deaminase gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12895 PAJ_RS12900 PAJ_2334 PAJ_RS12900 2821860 2822702 + glutamine-binding protein precursor GlnH gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12900 PAJ_RS12905 PAJ_2335 PAJ_RS12905 2822750 2823487 + membrane protein gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12905 PAJ_RS12910 PAJ_2336 PAJ_RS12910 2823484 2824128 + membrane protein gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12910 PAJ_RS12915 PAJ_2337 PAJ_RS12915 2824125 2824862 + glutamine ABC transporter ATP-binding protein gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12915 PAJ_RS12920 PAJ_2338 PAJ_RS12920 2824872 2826143 + hypothetical protein gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12920 PAJ_RS12925 PAJ_2339 PAJ_RS12925 2826239 2826970 - phosphoadenosine phosphosulfate reductase catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite gene gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12925 PAJ_RS12930 PAJ_2340 PAJ_RS12930 2826967 2828688 - sulfite reductase subunit beta hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide gene gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12930 PAJ_RS12935 PAJ_2341 cysJ cysJ 2828688 2830490 - sulfite reductase subunit alpha catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12935 PAJ_RS12940 PAJ_2342 PAJ_RS12940 2830764 2831591 + hypothetical protein gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12940 PAJ_RS12945 PAJ_2343 PAJ_RS12945 2831721 2832080 + 6-carboxytetrahydropterin synthase QueD gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12945 PAJ_RS12950 PAJ_2344 PAJ_RS12950 2832257 2832856 + pyrophosphatase gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12950 PAJ_RS12955 PAJ_2345 PAJ_RS12955 2832889 2833560 - 7-carboxy-7-deazaguanine synthase QueE gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12955 PAJ_RS12960 PAJ_2346 PAJ_RS12960 2833828 2834301 + hypothetical protein incomplete%3B partial in the middle of a contig%3B missing stop gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12960 PAJ_RS12965 PAJ_2347 PAJ_RS12965 2834291 2834890 + peptidase M20 incomplete%3B partial in the middle of a contig%3B missing start gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12965 PAJ_RS12970 PAJ_2348 PAJ_RS12970 2834948 2836063 - hypothetical protein gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12970 PAJ_RS12975 PAJ_2349 eno eno 2836303 2837598 - phosphopyruvate hydratase catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12975 PAJ_RS12980 PAJ_2350 pyrG pyrG 2837675 2839312 - CTP synthetase CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12980 PAJ_RS12985 PAJ_2351 mazG mazG 2839542 2840330 - nucleoside triphosphate pyrophosphohydrolase functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12985 PAJ_RS12990 PAJ_2352 relA relA 2840423 2842654 - GTP diphosphokinase (p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12990 PAJ_RS12995 PAJ_2353 rumA rumA 2842687 2844006 - 23S rRNA (uracil(1939)-C(5))-methyltransferase in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA%3B binds an iron-sulfur cluster [4Fe-4S] gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS12995 PAJ_RS13000 PAJ_2354 PAJ_RS13000 2844093 2846822 + hybrid sensor histidine kinase/response regulator part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13000 PAJ_RS13005 PAJ_2355 PAJ_RS13005 2846879 2848018 - glycerate kinase gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13005 PAJ_RS13010 PAJ_2356 garR garR 2848093 2848977 - 2-hydroxy-3-oxopropionate reductase catalyzes the reduction of tartronate semialdehyde to glycerate gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13010 PAJ_RS13015 PAJ_2357 PAJ_RS13015 2848996 2849766 - 5-keto-4-deoxy-D-glucarate aldolase cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13015 PAJ_RS13020 PAJ_2358 gudD gudD 2849813 2851144 - glucarate dehydratase catalyzes the formation of 5-keto-4-deoxy-D-glucarate from glucarate gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13020 PAJ_RS13025 PAJ_2359 PAJ_RS13025 2851155 2852499 - glucarate dehydratase frameshifted gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13025 PAJ_RS13030 PAJ_2360 PAJ_RS13030 2852509 2853852 - glucarate transporter gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13030 PAJ_RS13035 PAJ_2361 garD garD 2854364 2855923 + galactarate dehydratase catalyzes the formation of 5-dehydro-4-deoxy-D-glucarate from D-galactarate gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13035 PAJ_RS13040 PAJ_2363 PAJ_RS13040 2856043 2856489 - flavodoxin An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13040 PAJ_RS13045 PAJ_2364 PAJ_RS13045 2856502 2857281 - tRNA pseudouridine(65) synthase TruC catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp gene gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13045 PAJ_RS13050 PAJ_2365 PAJ_RS13050 2857281 2857610 - hypothetical protein gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13050 PAJ_RS13055 PAJ_2366 PAJ_RS13055 2858190 2858738 - SecY-interacting protein gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13055 PAJ_RS13060 PAJ_2367 queF queF 2858800 2859645 + preQ(1) synthase catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13060 PAJ_RS13065 PAJ_2368 PAJ_RS13065 2859815 2861179 + LOG family protein gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13065 PAJ_RS13070 PAJ_2369 PAJ_RS13070 2861213 2861971 + flap endonuclease Xni similar to flap endonuclease%3B FEN family%3B protein from E. coli does not have exonuclease activity gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13070 PAJ_RS13075 PAJ_2370 PAJ_RS13075 2862014 2863114 - 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13075 PAJ_RS13080 PAJ_2371 PAJ_RS13080 2863107 2863502 - membrane protein gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13080 PAJ_RS13085 PAJ_2372 PAJ_RS13085 2863553 2864470 - transcriptional regulator GcvA Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13085 PAJ_RS13090 PAJ_2373 PAJ_RS13090 2864807 2865028 - hypothetical protein gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13090 PAJ_RS13095 PAJ_2374 PAJ_RS13095 2865240 2866448 + cysteine sulfinate desulfinase gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13095 PAJ_RS13100 PAJ_2375 PAJ_RS13100 2866451 2866900 + cysteine desulfurase%2C sulfur acceptor subunit CsdE gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13100 PAJ_RS13105 PAJ_2376 PAJ_RS13105 2866897 2867697 - tRNA threonylcarbamoyladenosine dehydratase accepts sulfur from CsdA gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13105 PAJ_RS13110 PAJ_2377 mltA mltA 2867747 2868895 - murein transglycosylase A membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13110 PAJ_RS13115 PAJ_t0045 PAJ_RS13115 2869100 2869176 + tRNA-Met tRNA gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13115 PAJ_RS13120 PAJ_t0046 PAJ_RS13120 2869238 2869314 + tRNA-Met tRNA gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13120 PAJ_RS13125 PAJ_t0047 PAJ_RS13125 2869375 2869451 + tRNA-Met tRNA gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13125 PAJ_RS13130 PAJ_2378 PAJ_RS13130 2869647 2870975 + D-serine dehydratase catalyzes the formation of pyruvate from serine gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13130 PAJ_RS13135 PAJ_2379 amiC amiC 2871106 2872352 - N-acetylmuramoyl-L-alanine amidase hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan%3B frameshifted gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13135 PAJ_RS13140 PAJ_2380 PAJ_RS13140 2872586 2873914 + amino-acid N-acetyltransferase catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis gene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13140 PAJ_RS13145 PAJ_2381 recD recD 2873949 2875796 - exonuclease V subunit alpha helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity gene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13145 PAJ_RS13150 PAJ_2382 recB recB 2875793 2879332 - exodeoxyribonuclease V subunit beta helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13150 PAJ_RS13155 PAJ_2383 PAJ_RS13155 2879329 2882220 - pitrilysin degrades small peptides gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13155 PAJ_RS13160 PAJ_2384 recC recC 2882322 2885699 - exonuclease V subunit gamma catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13160 PAJ_RS13165 PAJ_RS13165 PAJ_RS13165 2885812 2886051 - hypothetical protein gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13165 PAJ_RS13170 PAJ_2386 PAJ_RS13170 2886098 2886502 - hypothetical protein gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13170 PAJ_RS13175 PAJ_2387 PAJ_RS13175 2886499 2887032 - prepilin-type N-terminal cleavage/methylation domain-containing protein gene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13175 PAJ_RS13180 PAJ_2388 PAJ_RS13180 2887023 2887493 - prepilin-type N-terminal cleavage/methylation domain-containing protein gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13180 PAJ_RS13185 PAJ_2389 PAJ_RS13185 2887686 2888480 - thymidylate synthase gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13185 PAJ_RS13190 PAJ_2390 PAJ_RS13190 2888477 2889358 - prolipoprotein diacylglyceryl transferase gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13190 PAJ_RS13195 PAJ_2391 PAJ_RS13195 2889468 2891714 - phosphoenolpyruvate--protein phosphotransferase PtsP member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr gene gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13195 PAJ_RS13200 PAJ_2392 PAJ_RS13200 2891727 2892254 - RNA pyrophosphohydrolase hydrolyzes diadenosine polyphosphate gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13200 PAJ_RS13205 PAJ_2393 PAJ_RS13205 2892941 2893618 + DNA mismatch repair protein MutH gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13205 PAJ_RS13210 PAJ_2394 PAJ_RS13210 2893719 2894429 + membrane protein gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13210 PAJ_RS13215 PAJ_2395 PAJ_RS13215 2894548 2894766 + hypothetical protein gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13215 PAJ_RS13220 PAJ_2396 tas tas 2894907 2895947 + NADP(H)-dependent aldo-keto reductase complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13220 PAJ_RS13225 PAJ_2397 PAJ_RS13225 2896017 2897267 - diaminopimelate decarboxylase catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13225 PAJ_RS13230 PAJ_2398 PAJ_RS13230 2897368 2898288 + LysR family transcriptional regulator activates the transcription of the lysA gene encoding diaminopimelate decarboxylase gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13230 PAJ_RS13235 PAJ_2399 PAJ_RS13235 2898285 2899448 - MFS transporter gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13235 PAJ_RS13240 PAJ_2400 PAJ_RS13240 2899816 2900442 + hypothetical protein gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13240 PAJ_RS13245 PAJ_2401 PAJ_RS13245 2900439 2900933 - cupin gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13245 PAJ_RS13250 PAJ_2402 lysS lysS 2901066 2902586 - lysine--tRNA ligase class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 gene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13250 PAJ_RS13255 PAJ_2404 PAJ_RS13255 2903895 2905634 - ssDNA exonuclease RecJ 5'-3' single-stranded-DNA-specific exonuclease gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13255 PAJ_RS13260 PAJ_2405 PAJ_RS13260 2905638 2906351 - bifunctional protein-disulfide isomerase/oxidoreductase DsbC gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13260 PAJ_RS13265 PAJ_2406 xerD xerD 2906374 2907267 - site-specific tyrosine recombinase XerD site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13265 PAJ_RS13270 PAJ_2407 PAJ_RS13270 2907370 2907888 + flavodoxin FldB An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13270 PAJ_RS13275 PAJ_2408 PAJ_RS13275 2908027 2908440 - hypothetical protein gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13275 PAJ_RS13280 PAJ_2409 PAJ_RS13280 2908415 2908681 - hypothetical protein gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13280 PAJ_RS13285 PAJ_2410 ygfZ ygfZ 2908906 2909892 + folate-binding protein physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulato%3B Hda supressor gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13285 PAJ_RS13290 PAJ_2411 PAJ_RS13290 2909927 2910580 - hemolysin III family protein gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13290 PAJ_RS13295 PAJ_2412 PAJ_RS13295 2910744 2911463 + transcriptional regulator gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13295 PAJ_RS13300 PAJ_2413 PAJ_RS13300 2911578 2913005 + 6-phospho-beta-glucosidase gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13300 PAJ_RS13305 PAJ_2414 PAJ_RS13305 2913040 2913783 - NAD(P)-dependent oxidoreductase gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13305 PAJ_RS13310 PAJ_2415 PAJ_RS13310 2913845 2916718 - glycine dehydrogenase (aminomethyl-transferring) acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine gene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13310 PAJ_RS13315 PAJ_2416 PAJ_RS13315 2916800 2917186 - glycine cleavage system protein H part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13315 PAJ_RS13320 PAJ_2417 gcvT gcvT 2917211 2918308 - glycine cleavage system protein T catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein gene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13320 PAJ_RS13325 PAJ_2418 PAJ_RS13325 2918741 2919943 - 2-octaprenylphenol hydroxylase gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13325 PAJ_RS13330 PAJ_2419 PAJ_RS13330 2919957 2921135 - 2-octaprenyl-6-methoxyphenyl hydroxylase Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13330 PAJ_RS13335 PAJ_2420 PAJ_RS13335 2921132 2922451 - Xaa-Pro aminopeptidase exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13335 PAJ_RS13340 PAJ_2421 PAJ_RS13340 2922488 2923066 - hypothetical protein the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13340 PAJ_RS13345 PAJ_2422 PAJ_RS13345 2923238 2923567 + Z-ring-associated protein gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13345 PAJ_RS13350 PAJ_RS13350 ssrS ssrS 2923607 2923790 + 6S RNA ncRNA gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13350 PAJ_RS13355 PAJ_2423 PAJ_RS13355 2923868 2924464 + 5-formyltetrahydrofolate cyclo-ligase ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13355 PAJ_RS13360 PAJ_2424 PAJ_RS13360 2924507 2925745 - D-3-phosphoglycerate dehydrogenase catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13360 PAJ_RS13365 PAJ_2425 PAJ_RS13365 2926025 2926684 - ribose 5-phosphate isomerase A catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13365 PAJ_RS13370 PAJ_2426 PAJ_RS13370 2926866 2927768 + transcriptional regulator ArgP specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13370 PAJ_RS13375 PAJ_2427 PAJ_RS13375 2928065 2928793 - oxidative stress defense protein gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13375 PAJ_RS13380 PAJ_2428 PAJ_RS13380 2928938 2929561 - arginine exporter protein Involved in the export of arginine gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13380 PAJ_RS13385 PAJ_2429 PAJ_RS13385 2929685 2930560 - mechanosensitive ion channel protein MscS participates in the regulation of osmotic pressure changes within the cel gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13385 PAJ_RS13390 PAJ_RS13390 PAJ_RS13390 2930737 2931079 - glyoxalase frameshifted gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13390 PAJ_RS13395 PAJ_2430 PAJ_RS13395 2931283 2932362 - class II fructose-bisphosphate aldolase catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13395 PAJ_RS13400 PAJ_2431 PAJ_RS13400 2932472 2933635 - phosphoglycerate kinase gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13400 PAJ_RS13405 PAJ_2432 gapA gapA 2933687 2934706 - erythrose-4-phosphate dehydrogenase required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13405 PAJ_RS13410 PAJ_2433 PAJ_RS13410 2935014 2937008 - transketolase catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13410 PAJ_RS13415 PAJ_2434 PAJ_RS13415 2937279 2938034 + hypothetical protein gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13415 PAJ_RS13420 PAJ_2435 PAJ_RS13420 2938078 2938998 - agmatinase catalyzes the formation of putrescine from agmatine gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13420 PAJ_RS13425 PAJ_2436 PAJ_RS13425 2939158 2941074 - arginine decarboxylase catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13425 PAJ_RS13430 PAJ_2437 PAJ_RS13430 2941942 2943093 + methionine adenosyltransferase catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13430 PAJ_RS13435 PAJ_2438 PAJ_RS13435 2943532 2944923 + D-galactose transporter gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13435 PAJ_RS13440 PAJ_2439 PAJ_RS13440 2945169 2947103 + chemotaxis protein gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13440 PAJ_RS13445 PAJ_2440 PAJ_RS13445 2947113 2947721 + SprT family protein gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13445 PAJ_RS13450 PAJ_2441 PAJ_RS13450 2947797 2948504 + deoxyribonuclease I gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13450 PAJ_RS13455 PAJ_2443 PAJ_RS13455 2948578 2949309 + 16S rRNA (uracil(1498)-N(3))-methyltransferase in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m(3)U1498 methyltransferase gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13455 PAJ_RS13460 PAJ_2444 PAJ_RS13460 2949425 2950369 + glutathione synthase catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13460 PAJ_RS13465 PAJ_2445 PAJ_RS13465 2950455 2951018 + hypothetical protein gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13465 PAJ_RS13470 PAJ_2446 PAJ_RS13470 2951018 2951434 + crossover junction endodeoxyribonuclease RuvA similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13470 PAJ_RS13475 PAJ_2447 PAJ_RS13475 2951431 2952426 - twitching motility protein PilT gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13475 PAJ_RS13480 PAJ_2448 PAJ_RS13480 2952442 2953149 + YggS family pyridoxal phosphate enzyme gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13480 PAJ_RS13485 PAJ_2449 PAJ_RS13485 2953162 2953716 + hypothetical protein gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13485 PAJ_RS13490 PAJ_2450 PAJ_RS13490 2953738 2954331 + non-canonical purine NTP pyrophosphatase HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13490 PAJ_RS13495 PAJ_2451 PAJ_RS13495 2954324 2955463 + YggW family oxidoreductase gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13495 PAJ_RS13500 PAJ_2452 PAJ_RS13500 2955516 2956250 - GntR family transcriptional regulator gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13500 PAJ_RS13505 PAJ_2453 cmtB cmtB 2956717 2957178 + phosphotransferase IIA component SgcA TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13505 PAJ_RS13510 PAJ_RS13510 PAJ_RS13510 2957204 2957473 + PTS mannitol transporter subunit IIB gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13510 PAJ_RS13515 PAJ_2454 PAJ_RS13515 2957518 2958894 + PTS ascorbate transporter subunit IIC gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13515 PAJ_RS13520 PAJ_2455 PAJ_RS13520 2959024 2959740 - hypothetical protein gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13520 PAJ_RS13525 PAJ_2456 PAJ_RS13525 2959783 2960109 - hypothetical protein gene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13525 PAJ_RS13530 PAJ_2457 trmB trmB 2960109 2960828 - tRNA (guanosine(46)-N7)-methyltransferase TrmB tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13530 PAJ_RS13535 PAJ_2458 PAJ_RS13535 2961027 2961959 - transcriptional regulator gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13535 PAJ_RS13540 PAJ_2459 PAJ_RS13540 2962228 2963580 + alpha-glucosidase/alpha-galactosidase catalyses the hydrolysis of terminal non-reducing alpha-D-galactose residues in alpha-D-galactosides gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13540 PAJ_RS13545 PAJ_2460 PAJ_RS13545 2963665 2965077 + melibiose/sodium symporter gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13545 PAJ_RS13550 PAJ_2461 PAJ_RS13550 2965312 2966397 + A/G-specific adenine glycosylase gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13550 PAJ_RS13555 PAJ_2462 PAJ_RS13555 2966397 2966669 + Fe(2+)-trafficking protein protects iron-sulfur proteins against oxidative damage gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13555 PAJ_RS13560 PAJ_2463 mltC mltC 2966723 2967802 + lytic murein transglycosylase Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13560 PAJ_RS13565 PAJ_RS13565 PAJ_RS13565 2967956 2968177 + hypothetical protein gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13565 PAJ_RS13570 PAJ_2464 PAJ_RS13570 2968693 2970843 - ornithine decarboxylase gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13570 PAJ_RS13575 PAJ_2465 PAJ_RS13575 2971456 2972439 + alcohol dehydrogenase gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13575 PAJ_RS13580 PAJ_RS13580 PAJ_RS13580 2973017 2973310 + hypothetical protein gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13580 PAJ_RS13585 PAJ_2466 PAJ_RS13585 2973325 2973855 - transcriptional regulator gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13585 PAJ_RS13590 PAJ_2467 PAJ_RS13590 2973939 2974736 - NADPH-dependent ferric siderophore reductase gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13590 PAJ_RS13595 PAJ_RS13595 PAJ_RS13595 2974963 2975157 - hypothetical protein gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13595 PAJ_RS13600 PAJ_2468 PAJ_RS13600 2975326 2976192 - AraC family transcriptional regulator gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13600 PAJ_RS13605 PAJ_2469 PAJ_RS13605 2976593 2977598 - ubiquinol oxidase subunit II frameshifted gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13605 PAJ_RS13610 PAJ_2470 PAJ_RS13610 2977600 2979012 - cytochrome d ubiquinol oxidase subunit I gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13610 PAJ_RS13615 PAJ_2471 PAJ_RS13615 2979797 2980180 - transcriptional regulator gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13615 PAJ_RS13620 PAJ_2472 PAJ_RS13620 2980283 2981140 + NAD(P)-dependent oxidoreductase gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13620 PAJ_RS13625 PAJ_RS13625 PAJ_RS13625 2981378 2981698 + antibiotic biosynthesis monooxygenase gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13625 PAJ_RS13630 PAJ_RS13630 PAJ_RS13630 2981691 2982083 + amino acid-binding protein gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13630 PAJ_RS13635 PAJ_2473 PAJ_RS13635 2982062 2982790 + transcriptional regulator gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13635 PAJ_RS13640 PAJ_2474 PAJ_RS13640 2982849 2983355 - GNAT family N-acetyltransferase gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13640 PAJ_RS13645 PAJ_2475 treF treF 2983771 2985330 + alpha%2Calpha-trehalase cytoplasmic%3B catalyzes the hydrolysis of trehalose to glucose gene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13645 PAJ_RS13650 PAJ_2476 PAJ_RS13650 2985402 2985911 - hypothetical protein gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13650 PAJ_RS13655 PAJ_2477 PAJ_RS13655 2985908 2986405 - hypothetical protein gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13655 PAJ_RS13660 PAJ_2478 PAJ_RS13660 2986908 2987072 - stress-induced protein gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13660 PAJ_RS13665 PAJ_RS13665 PAJ_RS13665 2987423 2987638 + hypothetical protein gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13665 PAJ_RS13670 PAJ_2479 PAJ_RS13670 2987684 2988502 - arylesterase gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13670 PAJ_RS13675 PAJ_2480 PAJ_RS13675 2988638 2989597 - diguanylate cyclase gene gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13675 PAJ_RS13680 PAJ_RS13680 PAJ_RS13680 2990038 2990281 + hypothetical protein frameshifted gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13680 PAJ_RS13685 PAJ_2481 PAJ_RS13685 2990394 2991056 + hypothetical protein gene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13685 PAJ_RS13690 PAJ_2482 PAJ_RS13690 2991473 2993056 + methyl-accepting chemotaxis protein gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13690 PAJ_RS13695 PAJ_RS13695 PAJ_RS13695 2993243 2993638 + hypothetical protein gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13695 PAJ_RS13700 PAJ_2483 PAJ_RS13700 2993934 2995220 + chemotaxis protein gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13700 PAJ_RS13705 PAJ_RS13705 PAJ_RS13705 2995716 2996031 + hypothetical protein frameshifted gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13705 PAJ_RS13710 PAJ_2484 PAJ_RS13710 2996131 2997417 + chemotaxis protein gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13710 PAJ_RS13715 PAJ_2485 PAJ_RS13715 2997849 2998622 + hypothetical protein gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13715 PAJ_RS13720 PAJ_2486 PAJ_RS13720 2998919 3000126 + DUF4432 domain-containing protein frameshifted gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13720 PAJ_RS13725 PAJ_2487 PAJ_RS13725 3000345 3001166 - hypothetical protein gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13725 PAJ_RS13730 PAJ_2488 PAJ_RS13730 3001530 3002192 + MFS transporter internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13730 PAJ_RS13735 PAJ_RS13735 PAJ_RS13735 3002266 3002454 - hypothetical protein gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13735 PAJ_RS13740 PAJ_RS13740 PAJ_RS13740 3002492 3002854 - hypothetical protein gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13740 PAJ_RS13745 PAJ_2489 PAJ_RS13745 3003145 3003609 - HxlR family transcriptional regulator gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13745 PAJ_RS13750 PAJ_2490 PAJ_RS13750 3003741 3004946 + MFS transporter gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13750 PAJ_RS13755 PAJ_2491 PAJ_RS13755 3004949 3005839 + membrane protein gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13755 PAJ_RS13760 PAJ_2492 PAJ_RS13760 3005774 3006700 - LysR family transcriptional regulator gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13760 PAJ_RS13765 PAJ_2493 PAJ_RS13765 3006848 3008269 + hypothetical protein gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13765 PAJ_RS13770 PAJ_2494 PAJ_RS13770 3008266 3009540 + membrane protein gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13770 PAJ_RS13775 PAJ_2495 PAJ_RS13775 3009726 3010390 + hypothetical protein frameshifted gene gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13775 PAJ_RS13780 PAJ_2496 PAJ_RS13780 3010641 3011654 - transposase gene gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13780 PAJ_RS13785 PAJ_2497 PAJ_RS13785 3012076 3013077 + vegetative incompatibility protein HET-E-1 gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13785 PAJ_RS13790 PAJ_2498 PAJ_RS13790 3013229 3014389 + C4-dicarboxylate ABC transporter gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13790 PAJ_RS13795 PAJ_2499 PAJ_RS13795 3014386 3014985 + uracil-DNA glycosylase gene gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13795 PAJ_RS13800 PAJ_2500 PAJ_RS13800 3015449 3015961 - GNAT family acetyltransferase gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13800 PAJ_RS13805 PAJ_RS13805 PAJ_RS13805 3015997 3016311 - hypothetical protein gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13805 PAJ_RS13810 PAJ_RS13810 PAJ_RS13810 3016316 3016759 - hypothetical protein gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13810 PAJ_RS13815 PAJ_RS13815 PAJ_RS13815 3016933 3017250 + integrative conjugative element protein%2C RAQPRD family gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13815 PAJ_RS13820 PAJ_RS13820 PAJ_RS13820 3017241 3017486 + integrating conjugative element protein gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13820 PAJ_RS13825 PAJ_RS13825 PAJ_RS13825 3017499 3017858 + integrating conjugative element membrane protein gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13825 PAJ_RS13830 PAJ_RS13830 PAJ_RS13830 3017868 3018242 + membrane protein gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13830 PAJ_RS13835 PAJ_2501 PAJ_RS13835 3018239 3018898 + integrating conjugative element protein gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13835 PAJ_RS13840 PAJ_2502 PAJ_RS13840 3018898 3019785 + integrating conjugative element protein gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13840 PAJ_RS13845 PAJ_2503 PAJ_RS13845 3019782 3021578 + integrating conjugative element protein gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13845 PAJ_RS13850 PAJ_RS13850 PAJ_RS13850 3021568 3021981 + conjugal transfer protein gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13850 PAJ_RS13855 PAJ_2504 PAJ_RS13855 3021982 3024801 + conjugative transfer ATPase%2C PFL_4706 family gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13855 PAJ_RS13860 PAJ_RS13860 PAJ_RS13860 3024798 3025202 + hypothetical protein gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13860 PAJ_RS13865 PAJ_2505 PAJ_RS13865 3025360 3027501 - hypothetical protein gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13865 PAJ_RS13870 PAJ_2506 PAJ_RS13870 3028110 3030560 + DNA mismatch repair protein MutL gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13870 PAJ_RS13875 PAJ_RS13875 PAJ_RS13875 3030816 3031223 + integrating conjugative element protein gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13875 PAJ_RS13880 PAJ_2507 PAJ_RS13880 3031220 3032194 + integrating conjugative element protein gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13880 PAJ_RS13885 PAJ_2508 PAJ_RS13885 3032206 3033621 + integrating conjugative element protein gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13885 PAJ_RS13890 PAJ_RS13890 PAJ_RS13890 3033623 3033970 + membrane protein gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13890 PAJ_RS13895 PAJ_2509 PAJ_RS13895 3033972 3035498 + conjugal transfer protein TraG gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13895 PAJ_RS13900 PAJ_RS13900 PAJ_RS13900 3035545 3035778 - hypothetical protein gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13900 PAJ_RS13905 PAJ_RS13905 PAJ_RS13905 3035985 3036428 + hypothetical protein gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13905 PAJ_RS13910 PAJ_2510 PAJ_RS13910 3037523 3038410 + hypothetical protein gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13910 PAJ_RS13915 PAJ_2511 PAJ_RS13915 3038667 3040025 + P-loop ATPase gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13915 PAJ_RS13920 PAJ_RS13920 PAJ_RS13920 3040422 3040838 + hypothetical protein gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13920 PAJ_RS13925 PAJ_RS13925 PAJ_RS13925 3040927 3041298 + hypothetical protein gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13925 PAJ_RS13930 PAJ_RS13930 PAJ_RS13930 3041343 3041525 + hypothetical protein gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13930 PAJ_RS13935 PAJ_RS13935 PAJ_RS13935 3041622 3041936 + hypothetical protein gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13935 PAJ_RS13940 PAJ_RS13940 PAJ_RS13940 3042047 3042355 + hypothetical protein gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13940 PAJ_RS13945 PAJ_2513 PAJ_RS13945 3042428 3043039 + hypothetical protein gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13945 PAJ_RS13950 PAJ_2514 PAJ_RS13950 3043112 3044092 + antirestriction protein gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13950 PAJ_RS13955 PAJ_2515 PAJ_RS13955 3044186 3045130 + hypothetical protein gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13955 PAJ_RS13960 PAJ_2516 PAJ_RS13960 3045269 3045976 + type I restriction-modification system methyltransferase subunit gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13960 PAJ_RS13965 PAJ_2517 PAJ_RS13965 3046322 3047620 - homoserine dehydrogenase gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13965 PAJ_RS13970 PAJ_2518 PAJ_RS13970 3047757 3048887 + MFS transporter permease gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13970 PAJ_RS13975 PAJ_2519 PAJ_RS13975 3048916 3050754 - asparagine synthetase B gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13975 PAJ_RS13980 PAJ_RS13980 PAJ_RS13980 3050758 3051027 - acyl carrier protein gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13980 PAJ_RS13985 PAJ_2520 PAJ_RS13985 3051005 3052015 - gamma-butyrolactone biosynthesis protein gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13985 PAJ_RS13990 PAJ_2521 PAJ_RS13990 3052008 3053153 - phosphonopyruvate decarboxylase gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13990 PAJ_RS13995 PAJ_2522 PAJ_RS13995 3053171 3053980 - phosphoenolpyruvate mutase gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS13995 PAJ_RS14000 PAJ_2523 PAJ_RS14000 3054779 3055200 + UV protection protein frameshifted gene gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14000 PAJ_RS14005 PAJ_RS14005 PAJ_RS14005 3055200 3055334 + DNA repair protein gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14005 PAJ_RS14010 PAJ_2524 PAJ_RS14010 3055499 3056482 + integrase gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14010 PAJ_RS14015 PAJ_RS14015 PAJ_RS14015 3056484 3058601 + integrase internal stop gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14015 PAJ_RS14020 PAJ_RS14020 PAJ_RS14020 3058727 3059128 + hypothetical protein gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14020 PAJ_RS14025 PAJ_RS14025 PAJ_RS14025 3059295 3059675 - fluoride ion transporter CrcB camphor resistance protein CrcB%3B may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14025 PAJ_RS14030 PAJ_2525 gpmA gpmA 3059672 3060379 - phosphoglyceromutase 2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14030 PAJ_RS14035 PAJ_2526 PAJ_RS14035 3060423 3061712 - phosphopyruvate hydratase gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14035 PAJ_RS14040 PAJ_RS14040 PAJ_RS14040 3061728 3062153 - universal stress protein gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14040 PAJ_RS14045 PAJ_2527 PAJ_RS14045 3062150 3062971 - inorganic pyrophosphatase gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14045 PAJ_RS14050 PAJ_RS14050 PAJ_RS14050 3063256 3063844 - uracil-DNA glycosylase frameshifted gene gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14050 PAJ_RS14055 PAJ_2528 PAJ_RS14055 3063841 3065001 - C4-dicarboxylate ABC transporter gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14055 PAJ_RS14060 PAJ_2529 PAJ_RS14060 3065153 3066154 - PQQ-dependent catabolism protein gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14060 PAJ_RS14065 PAJ_2530 PAJ_RS14065 3066347 3067432 + DNA polymerase V subunit UmuC binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14065 PAJ_RS14070 PAJ_RS14070 PAJ_RS14070 3067611 3067853 - DNA polymerase III subunit theta internal stop gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14070 PAJ_RS14075 PAJ_RS14075 PAJ_RS14075 3067895 3068146 - hypothetical protein gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14075 PAJ_RS14080 PAJ_RS14080 PAJ_RS14080 3068375 3068776 + hypothetical protein gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14080 PAJ_RS14085 PAJ_2531 PAJ_RS14085 3068889 3069305 - GCN5 family acetyltransferase gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14085 PAJ_RS14090 PAJ_2532 PAJ_RS14090 3069537 3070433 - permease gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14090 PAJ_RS14095 PAJ_2533 PAJ_RS14095 3070488 3071102 + TetR family transcriptional regulator gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14095 PAJ_RS14100 PAJ_2534 PAJ_RS14100 3071635 3072186 - hypothetical protein gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14100 PAJ_RS14105 PAJ_2535 PAJ_RS14105 3072240 3073445 - conjugal transfer protein TraF gene gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14105 PAJ_RS14110 PAJ_2536 PAJ_RS14110 3073541 3074530 - conjugal transfer protein TraE gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14110 PAJ_RS14115 PAJ_2537 PAJ_RS14115 3074703 3075296 - pili assembly chaperone gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14115 PAJ_RS14120 PAJ_2538 PAJ_RS14120 3075447 3077000 + helicase gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14120 PAJ_RS14125 PAJ_2539 PAJ_RS14125 3077031 3077990 + tyrosine recombinase XerD gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14125 PAJ_RS14130 PAJ_t0048 PAJ_RS14130 3078276 3078351 - tRNA-Phe tRNA gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14130 PAJ_RS14135 PAJ_2540 PAJ_RS14135 3078646 3079875 + hypothetical protein gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14135 PAJ_RS14140 PAJ_2541 PAJ_RS14140 3079892 3080458 + hypothetical protein gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14140 PAJ_RS14145 PAJ_2542 PAJ_RS14145 3080451 3080855 + Fe-S oxidoreductase gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14145 PAJ_RS14150 PAJ_2543 PAJ_RS14150 3080852 3081562 + diguanylate cyclase gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14150 PAJ_RS14155 PAJ_2544 PAJ_RS14155 3081559 3083442 - penicillin-binding protein 2 gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14155 PAJ_RS14160 PAJ_2545 deoD deoD 3083660 3084373 - purine-nucleoside phosphorylase catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14160 PAJ_RS14165 PAJ_2546 PAJ_RS14165 3084407 3085630 - phosphopentomutase gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14165 PAJ_RS14170 PAJ_2547 PAJ_RS14170 3085725 3087053 - thymidine phosphorylase gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14170 PAJ_RS14175 PAJ_2548 PAJ_RS14175 3087113 3087892 - 2-deoxyribose-5-phosphate aldolase catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate gene gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14175 PAJ_RS14180 PAJ_2549 PAJ_RS14180 3088122 3088895 - deoxyribonuclease gene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14180 PAJ_RS14185 PAJ_2550 PAJ_RS14185 3088892 3089941 - patatin family protein gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14185 PAJ_RS14190 PAJ_2551 PAJ_RS14190 3090442 3091056 - BON domain-containing protein gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14190 PAJ_RS14195 PAJ_2552 prfC prfC 3091312 3092898 - peptide chain release factor 3 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14195 PAJ_RS14200 PAJ_2553 PAJ_RS14200 3093244 3093843 - hypothetical protein gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14200 PAJ_RS14205 PAJ_2554 PAJ_RS14205 3094258 3094764 + ferritin cytoplasmic iron storage protein gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14205 PAJ_RS14210 PAJ_2555 PAJ_RS14210 3094814 3097177 - alpha-glucosidase gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14210 PAJ_RS14215 PAJ_2556 PAJ_RS14215 3097188 3098498 - hexuronate transporter ExuT involved in the transport of aldohexuronates gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14215 PAJ_RS14220 PAJ_2557 PAJ_RS14220 3098719 3099783 + cytochrome-c peroxidase gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14220 PAJ_RS14225 PAJ_2558 PAJ_RS14225 3099789 3100877 - hypothetical protein gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14225 PAJ_RS14230 PAJ_2559 PAJ_RS14230 3100865 3102607 - ABC transporter permease gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14230 PAJ_RS14235 PAJ_2560 PAJ_RS14235 3102610 3103599 - ABC transporter substrate-binding protein gene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14235 PAJ_RS14240 PAJ_2561 PAJ_RS14240 3103627 3104694 - spermidine/putrescine ABC transporter ATP-binding protein gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14240 PAJ_RS14245 PAJ_2562 PAJ_RS14245 3104769 3106475 - acyltransferase gene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14245 PAJ_RS14250 PAJ_RS14250 PAJ_RS14250 3106543 3106773 - hypothetical protein gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14250 PAJ_RS14255 PAJ_2563 PAJ_RS14255 3106811 3107413 - hypothetical protein gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14255 PAJ_RS14260 PAJ_RS14260 PAJ_RS14260 3107572 3107757 - hypothetical protein gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14260 PAJ_RS14265 PAJ_2564 PAJ_RS14265 3107798 3108697 - ABC transporter substrate-binding protein gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14265 PAJ_RS14270 PAJ_2565 PAJ_RS14270 3108707 3109501 - arginine ABC transporter ATP-binding protein gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14270 PAJ_RS14275 PAJ_2566 PAJ_RS14275 3109485 3110411 - amino acid ABC transporter permease gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14275 PAJ_RS14280 PAJ_2567 PAJ_RS14280 3110421 3110933 - N-acetyltransferase gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14280 PAJ_RS14285 PAJ_2568 PAJ_RS14285 3110944 3111882 - ABC transporter substrate-binding protein gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14285 PAJ_RS14290 PAJ_2569 PAJ_RS14290 3111894 3113207 - monooxygenase gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14290 PAJ_RS14295 PAJ_2570 PAJ_RS14295 3113284 3114437 - hydrolase frameshifted gene gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14295 PAJ_RS14300 PAJ_2571 PAJ_RS14300 3114464 3115465 - alkane 1-monooxygenase gene gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14300 PAJ_RS14305 PAJ_RS14305 PAJ_RS14305 3115680 3116000 + hypothetical protein gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14305 PAJ_RS14310 PAJ_2572 PAJ_RS14310 3116054 3117220 + hydrolase gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14310 PAJ_RS14315 PAJ_2573 PAJ_RS14315 3117297 3117779 + membrane protein gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14315 PAJ_RS14320 PAJ_RS14320 PAJ_RS14320 3117776 3119179 - GntR family transcriptional regulator gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14320 PAJ_RS14325 PAJ_2574 PAJ_RS14325 3119250 3121346 - membrane protein gene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14325 PAJ_RS14330 PAJ_2575 PAJ_RS14330 3122042 3122608 + ferrous iron transporter A gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14330 PAJ_RS14335 PAJ_2576 PAJ_RS14335 3122633 3123154 + fimbrial protein gene gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14335 PAJ_RS14340 PAJ_2577 PAJ_RS14340 3123178 3123876 + pili assembly chaperone SfmC gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14340 PAJ_RS14345 PAJ_2578 PAJ_RS14345 3123886 3126327 + fimbrial assembly protein gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14345 PAJ_RS14350 PAJ_2579 PAJ_RS14350 3126324 3127295 + fimbrial protein gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14350 PAJ_RS14355 PAJ_2580 PAJ_RS14355 3127292 3128614 - MFS transporter is involved in the uptake of citrate and the transport of protons into the cell gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14355 PAJ_RS14360 PAJ_2581 PAJ_RS14360 3128934 3129356 - biopolymer transport protein ExbD membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14360 PAJ_RS14365 PAJ_2582 PAJ_RS14365 3129362 3130105 - tonB-system energizer ExbB membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14365 PAJ_RS14370 PAJ_2583 PAJ_RS14370 3130503 3131999 + PTS sugar transporter phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14370 PAJ_RS14375 PAJ_2584 PAJ_RS14375 3132072 3133088 + LacI family transcriptional regulator gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14375 PAJ_RS14380 PAJ_2585 PAJ_RS14380 3133195 3133950 + hypothetical protein gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14380 PAJ_RS14385 PAJ_2586 PAJ_RS14385 3133992 3135368 - 4-hydroxybenzoate transporter gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14385 PAJ_RS14390 PAJ_2587 PAJ_RS14390 3135653 3137545 - 4-hydroxyphenylpyruvate dioxygenase gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14390 PAJ_RS14395 PAJ_2588 PAJ_RS14395 3137774 3138514 + protocatechuate 3%2C4-dioxygenase subunit beta gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14395 PAJ_RS14400 PAJ_2589 PAJ_RS14400 3138511 3139131 + protocatechuate 3%2C4-dioxygenase subunit alpha gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14400 PAJ_RS14405 PAJ_2590 PAJ_RS14405 3139192 3140124 + LysR family transcriptional regulator gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14405 PAJ_RS14410 PAJ_2591 PAJ_RS14410 3140134 3141276 - 3-oxoadipate enol-lactonase II CatD gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14410 PAJ_RS14415 PAJ_2592 PAJ_RS14415 3141273 3142613 - 3-carboxy-cis%2Ccis-muconate cycloisomerase Catalyzes the cycloisomerization of cis%2Ccis-muconate gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14415 PAJ_RS14420 PAJ_2593 PAJ_RS14420 3142617 3143819 - acetyl-CoA acetyltransferase catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14420 PAJ_RS14425 PAJ_2594 PAJ_RS14425 3143830 3144483 - 3-oxoadipate CoA-transferase subunit B gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14425 PAJ_RS14430 PAJ_2595 PAJ_RS14430 3144494 3145183 - 3-oxoadipate CoA-transferase subunit A gene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14430 PAJ_RS14435 PAJ_2596 PAJ_RS14435 3145370 3146176 + IclR family transcriptional regulator gene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14435 PAJ_RS14440 PAJ_2597 PAJ_RS14440 3146254 3147444 + cystathionine beta-lyase catalyzes the formation of L-homocysteine from cystathionine gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14440 PAJ_RS14445 PAJ_2598 PAJ_RS14445 3147662 3148324 + membrane protein gene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14445 PAJ_RS14450 PAJ_2599 PAJ_RS14450 3148337 3149245 - AraC family transcriptional regulator gene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14450 PAJ_RS14455 PAJ_2600 dkgA dkgA 3149438 3150265 + 2%2C5-didehydrogluconate reductase A methylglyoxal reductase/beta-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14455 PAJ_RS14460 PAJ_2601 PAJ_RS14460 3150769 3151704 + flagellin gene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14460 PAJ_RS14465 PAJ_2602 PAJ_RS14465 3151761 3153191 - cell division protein FtsP septal ring component that protects the divisome from stress gene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14465 PAJ_RS14470 PAJ_2603 PAJ_RS14470 3153337 3154074 - 1-acyl-sn-glycerol-3-phosphate acyltransferase catalyzes the formation of 1%2C2-diacyl-sn-glycerol 3-phosphate from 1-acyl-sn-glycerol 3-phosphate using either acyl-CoA or acyl-ACP gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14470 PAJ_RS14475 PAJ_2604 PAJ_RS14475 3154119 3156392 - DNA topoisomerase IV subunit A decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14475 PAJ_RS14480 PAJ_2605 PAJ_RS14480 3156785 3158347 + transcriptional regulator gene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14480 PAJ_RS14485 PAJ_2606 PAJ_RS14485 3158366 3158836 + PTS fructose transporter subunit IIA gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14485 PAJ_RS14490 PAJ_2607 PAJ_RS14490 3158859 3159173 + PTS fructose transporter subunit IIB gene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14490 PAJ_RS14495 PAJ_2608 PAJ_RS14495 3159185 3160276 + PTS fructose transporter subunit IIC gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14495 PAJ_RS14500 PAJ_RS14500 PAJ_RS14500 3160286 3161137 + aldolase gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14500 PAJ_RS14505 PAJ_2609 PAJ_RS14505 3161225 3162085 + hypothetical protein gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14505 PAJ_RS14510 PAJ_2610 PAJ_RS14510 3162413 3163225 - cyclohexadienyl dehydratase gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14510 PAJ_RS14515 PAJ_2611 PAJ_RS14515 3163339 3163920 + NADPH quinone reductase MdaB involved in drug resistance gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14515 PAJ_RS14520 PAJ_2612 PAJ_RS14520 3163952 3164260 + quinol monooxygenase catalyzes the oxidation of menadiol to menadione gene gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14520 PAJ_RS14525 PAJ_2613 PAJ_RS14525 3164321 3166216 - DNA topoisomerase IV subunit B decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14525 PAJ_RS14530 PAJ_2614 PAJ_RS14530 3166265 3166846 - esterase YqiA Displays esterase activity toward palmitoyl-CoA and pNP-butyrate gene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14530 PAJ_RS14535 PAJ_RS14535 PAJ_RS14535 3166850 3167677 - phosphodiesterase gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14535 PAJ_RS14540 PAJ_2616 PAJ_RS14540 3167720 3168145 - dehydrogenase gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14540 PAJ_RS14545 PAJ_2617 nudF nudF 3168142 3168777 - ADP-ribose diphosphatase ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14545 PAJ_RS14550 PAJ_2618 PAJ_RS14550 3168989 3170458 + outer membrane channel protein TolC gene gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14550 PAJ_RS14555 PAJ_2619 PAJ_RS14555 3170601 3171272 + membrane protein gene gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14555 PAJ_RS14560 PAJ_2620 PAJ_RS14560 3171281 3172441 + hypothetical protein gene gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14560 PAJ_RS14565 PAJ_2621 PAJ_RS14565 3172480 3173262 - dioxygenase seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine gene gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14565 PAJ_RS14570 PAJ_2622 ribB ribB 3173446 3174102 - 3%2C4-dihydroxy-2-butanone-4-phosphate synthase DHBP synthase%3B functions during riboflavin biosynthesis gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14570 PAJ_RS14575 PAJ_2623 PAJ_RS14575 3174533 3174865 + hypothetical protein gene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14575 PAJ_RS14580 PAJ_2624 PAJ_RS14580 3174902 3176326 - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14580 PAJ_RS14585 PAJ_2625 PAJ_RS14585 3176397 3179249 - glutamine-synthetase adenylyltransferase catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14585 PAJ_RS14590 PAJ_2626 PAJ_RS14590 3179279 3180589 - CYTH domain-containing protein gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14590 PAJ_RS14595 PAJ_2627 PAJ_RS14595 3180856 3181476 + hypothetical protein gene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14595 PAJ_RS14600 PAJ_2628 PAJ_RS14600 3181633 3182850 + multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14600 PAJ_RS14605 PAJ_2629 PAJ_RS14605 3182885 3183703 - undecaprenyl-diphosphatase BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14605 PAJ_RS14610 PAJ_2630 folB folB 3183898 3184257 - dihydroneopterin aldolase catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14610 PAJ_RS14615 PAJ_2631 PAJ_RS14615 3184366 3184965 + glycerol-3-phosphate acyltransferase involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14615 PAJ_RS14620 PAJ_2632 PAJ_RS14620 3185001 3186014 - tRNA N6-adenosine(37)-threonylcarbamoyltransferase complex transferase subunit TsaD universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis gene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14620 PAJ_RS14625 PAJ_2633 rpsU rpsU 3186293 3186508 + 30S ribosomal protein S21 a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14625 PAJ_RS14630 PAJ_2634 dnaG dnaG 3186625 3188370 + DNA primase synthesizes RNA primers at the replication forks gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14630 PAJ_RS14635 PAJ_2635 PAJ_RS14635 3189184 3191028 + RNA polymerase sigma factor RpoD sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria gene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14635 PAJ_RS14640 PAJ_2636 PAJ_RS14640 3191099 3191614 - mismatch-specific DNA-glycosylase gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14640 PAJ_RS14645 PAJ_t0049 PAJ_RS14645 3191914 3191989 + tRNA-Met tRNA gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14645 PAJ_RS14650 PAJ_RS14650 PAJ_RS14650 3192084 3192979 + integrase frameshifted%3B internal stop gene gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14650 PAJ_RS14655 PAJ_2637 PAJ_RS14655 3192985 3193605 + hypothetical protein gene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14655 PAJ_RS14660 PAJ_RS14660 PAJ_RS14660 3193605 3193931 + hypothetical protein incomplete%3B partial in the middle of a contig%3B missing stop gene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14660 PAJ_RS14665 PAJ_RS14665 PAJ_RS14665 3194578 3194769 - repressor gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14665 PAJ_RS14670 PAJ_2638 PAJ_RS14670 3194907 3195437 + hypothetical protein gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14670 PAJ_RS14675 PAJ_2639 PAJ_RS14675 3195859 3196080 - late control protein ogr/delta gene gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14675 PAJ_RS14680 PAJ_2640 PAJ_RS14680 3196154 3197311 - cytochrome c1 gene gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14680 PAJ_RS14685 PAJ_2641 PAJ_RS14685 3197313 3197816 - tail assembly protein gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14685 PAJ_RS14690 PAJ_2642 PAJ_RS14690 3197823 3200069 - phage tail tape measure protein gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14690 PAJ_RS14695 PAJ_RS14695 PAJ_RS14695 3200217 3200513 - hypothetical protein gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14695 PAJ_RS14700 PAJ_2643 PAJ_RS14700 3200568 3201080 - major tail tube protein gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14700 PAJ_RS14705 PAJ_2644 PAJ_RS14705 3201093 3202262 - tail sheath protein gene gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14705 PAJ_RS14710 PAJ_2645 PAJ_RS14710 3202343 3202921 - DNA invertase gene gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14710 PAJ_RS14715 PAJ_RS14715 PAJ_RS14715 3203004 3203516 + phage tail protein gene gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14715 PAJ_RS14720 PAJ_2646 PAJ_RS14720 3204162 3204758 - tail assembly protein gene gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14720 PAJ_RS14725 PAJ_2647 PAJ_RS14725 3204758 3205837 - phage tail protein gene gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14725 PAJ_RS14730 PAJ_2648 PAJ_RS14730 3205834 3206442 - phage tail protein I gene gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14730 PAJ_RS14735 PAJ_2649 PAJ_RS14735 3206435 3207343 - baseplate assembly protein gene gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14735 PAJ_RS14740 PAJ_2650 PAJ_RS14740 3207347 3207697 - baseplate assembly protein gene gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14740 PAJ_RS14745 PAJ_2651 PAJ_RS14745 3207694 3208278 - baseplate assembly protein gene gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14745 PAJ_RS14750 PAJ_2652 PAJ_RS14750 3208371 3208838 - tail fiber protein gene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14750 PAJ_RS14755 PAJ_RS14755 PAJ_RS14755 3208928 3209362 - phage lysis regulatory protein%2C LysB family gene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14755 PAJ_RS14760 PAJ_2653 PAJ_RS14760 3209359 3209868 - glycoside hydrolase gene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14760 PAJ_RS14765 PAJ_RS14765 PAJ_RS14765 3209852 3210076 - hypothetical protein gene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14765 PAJ_RS14770 PAJ_RS14770 PAJ_RS14770 3210082 3210285 - tail protein X gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14770 PAJ_RS14775 PAJ_2655 PAJ_RS14775 3210978 3211202 - hypothetical protein gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14775 PAJ_RS14780 PAJ_2656 PAJ_RS14780 3211410 3213473 - replication protein gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14780 PAJ_RS14785 PAJ_2657 PAJ_RS14785 3213470 3213697 - hypothetical protein gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14785 PAJ_RS14790 PAJ_2658 PAJ_RS14790 3213697 3213915 - hypothetical protein gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14790 PAJ_RS14795 PAJ_2659 PAJ_RS14795 3213982 3214350 - hypothetical protein gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14795 PAJ_RS14800 PAJ_2660 PAJ_RS14800 3214775 3215359 + hypothetical protein gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14800 PAJ_RS14805 PAJ_2661 PAJ_RS14805 3215566 3216423 - hypothetical protein gene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14805 PAJ_RS14810 PAJ_2662 PAJ_RS14810 3216427 3217836 - PTS fructose transporter subunit IIBC gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14810 PAJ_RS14815 PAJ_2663 PAJ_RS14815 3217857 3218330 - DNA-binding protein gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14815 PAJ_RS14820 PAJ_2664 PAJ_RS14820 3218323 3220026 - transcriptional regulator gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14820 PAJ_RS14825 PAJ_2665 PAJ_RS14825 3220041 3221519 - sodium-independent anion transporter gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14825 PAJ_RS14830 PAJ_2666 PAJ_RS14830 3221975 3223519 - methyl-accepting chemotaxis protein gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14830 PAJ_RS14835 PAJ_RS14835 PAJ_RS14835 3223718 3223912 - hypothetical protein gene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14835 PAJ_RS14840 PAJ_2668 PAJ_RS14840 3224716 3226644 + chemotaxis protein gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14840 PAJ_RS14845 PAJ_RS14845 PAJ_RS14845 3226959 3227216 + hypothetical protein gene gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14845 PAJ_RS14850 PAJ_RS14850 PAJ_RS14850 3227283 3227540 - hypothetical protein gene gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14850 PAJ_RS14855 PAJ_RS14855 PAJ_RS14855 3227629 3227904 - regulatory protein AriR gene gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14855 PAJ_RS14860 PAJ_RS14860 PAJ_RS14860 3228047 3228316 - hypothetical protein gene gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14860 PAJ_RS14865 PAJ_2669 PAJ_RS14865 3228458 3228696 - two-component-system connector protein YcgZ frameshifted gene gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14865 PAJ_RS14870 PAJ_RS14870 PAJ_RS14870 3228966 3229274 - hypothetical protein gene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14870 PAJ_RS14875 PAJ_2670 PAJ_RS14875 3230011 3230253 + hypothetical protein gene gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14875 PAJ_RS14880 PAJ_2671 PAJ_RS14880 3230871 3233045 - bifunctional diguanylate cyclase/phosphodiesterase gene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14880 PAJ_RS14885 PAJ_RS14885 PAJ_RS14885 3233291 3233530 - hypothetical protein gene gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14885 PAJ_RS14890 PAJ_2672 PAJ_RS14890 3233953 3235416 - methyl-accepting chemotaxis citrate transducer Tcp gene gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14890 PAJ_RS14895 PAJ_2673 PAJ_RS14895 3235757 3237538 + histidine kinase gene gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14895 PAJ_RS14900 PAJ_2674 PAJ_RS14900 3237555 3239132 - hypothetical protein gene gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14900 PAJ_RS14905 PAJ_RS14905 PAJ_RS14905 3239159 3239359 - hypothetical protein gene gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14905 PAJ_RS14910 PAJ_RS14910 PAJ_RS14910 3239497 3239850 + hypothetical protein gene gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14910 PAJ_RS14915 PAJ_2675 PAJ_RS14915 3239949 3241046 + D-alanine--D-alanine ligase A gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14915 PAJ_RS14920 PAJ_2676 PAJ_RS14920 3241065 3242489 - diguanylate cyclase gene gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14920 PAJ_RS14925 PAJ_2677 PAJ_RS14925 3242751 3244229 - sulfate transporter YchM gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14925 PAJ_RS14930 PAJ_2678 PAJ_RS14930 3244226 3244858 - carbonic anhydrase gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14930 PAJ_RS14935 PAJ_2679 PAJ_RS14935 3245431 3246240 - 5'-nucleotidase%2C lipoprotein e(P4) family gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14935 PAJ_RS14940 PAJ_2680 PAJ_RS14940 3246349 3247056 + hypothetical protein gene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14940 PAJ_RS14945 PAJ_2681 fadH fadH 3247219 3249240 + NADPH-dependent 2%2C4-dienoyl-CoA reductase catalyzes the formation of trans-2- enoyl-CoA from 2%2C4-dienoyl-CoA gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14945 PAJ_RS14950 PAJ_2682 PAJ_RS14950 3249241 3250359 - 23S rRNA methyltransferase gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14950 PAJ_RS14955 PAJ_2683 PAJ_RS14955 3250442 3250945 + metal-dependent hydrolase gene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14955 PAJ_RS14960 PAJ_2684 PAJ_RS14960 3250942 3252630 - hypothetical protein gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14960 PAJ_RS14965 PAJ_2685 PAJ_RS14965 3252766 3253746 + oxidoreductase gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14965 PAJ_RS14970 PAJ_2686 PAJ_RS14970 3254007 3254977 + hypothetical protein frameshifted gene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14970 PAJ_RS14975 PAJ_2687 PAJ_RS14975 3255032 3256522 - altronate hydrolase gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14975 PAJ_RS14980 PAJ_2688 PAJ_RS14980 3256525 3257973 - altronate oxidoreductase catalyzes the formation of D-tagaturonate from D-altronate gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14980 PAJ_RS14985 PAJ_2689 PAJ_RS14985 3257976 3259391 - uronate isomerase catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate%3B functions in glucuronic and galacturonic metabolism gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14985 PAJ_RS14990 PAJ_2690 PAJ_RS14990 3259790 3261094 + hexuronate transporter ExuT involved in the transport of aldohexuronates gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14990 PAJ_RS14995 PAJ_2691 PAJ_RS14995 3261182 3261958 + GntR family transcriptional regulator regulates the expression of uxuBA gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS14995 PAJ_RS15000 PAJ_2692 PAJ_RS15000 3262271 3262945 + membrane protein gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15000 PAJ_RS15005 PAJ_2693 PAJ_RS15005 3262942 3263289 + modulator protein MzrA gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15005 PAJ_RS15010 PAJ_2694 PAJ_RS15010 3263477 3263851 + hypothetical protein gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15010 PAJ_RS15015 PAJ_2695 PAJ_RS15015 3263887 3264192 + membrane protein gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15015 PAJ_RS15020 PAJ_2696 PAJ_RS15020 3264192 3264590 + membrane protein gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15020 PAJ_RS15025 PAJ_2697 PAJ_RS15025 3264590 3264874 + membrane protein gene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15025 PAJ_RS15030 PAJ_2698 PAJ_RS15030 3265077 3265487 + membrane protein gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15030 PAJ_RS15035 PAJ_2699 PAJ_RS15035 3265693 3266253 + hypothetical protein gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15035 PAJ_RS15040 PAJ_2700 PAJ_RS15040 3266319 3267011 + membrane protein gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15040 PAJ_RS15045 PAJ_2701 PAJ_RS15045 3267045 3268052 - ArnA gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15045 PAJ_RS15050 PAJ_2702 PAJ_RS15050 3268223 3269197 + glutathione-dependent reductase gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15050 PAJ_RS15055 PAJ_2703 PAJ_RS15055 3269287 3270615 - threonine/serine transporter TdcC gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15055 PAJ_RS15060 PAJ_2704 PAJ_RS15060 3270626 3271615 - serine/threonine dehydratase catalyzes the formation of 2-oxobutanoate from L-threonine%3B catabolic gene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15060 PAJ_RS15065 PAJ_2705 PAJ_RS15065 3272347 3273957 - glucan biosynthesis protein D gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15065 PAJ_RS15070 PAJ_RS15070 rnpB rnpB 3274431 3274806 - RNase P RNA component class A ncRNA gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15070 PAJ_RS15075 PAJ_2706 PAJ_RS15075 3274870 3275730 - rRNA (cytidine-2'-O-)-methyltransferase gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15075 PAJ_RS15080 PAJ_2707 PAJ_RS15080 3275793 3277826 + penicillin-binding protein activator LpoA gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15080 PAJ_RS15085 PAJ_RS15085 PAJ_RS15085 3277784 3278179 + hypothetical protein gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15085 PAJ_RS15090 PAJ_2709 PAJ_RS15090 3278194 3278781 + DnaA initiator-associating protein DiaA Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15090 PAJ_RS15095 PAJ_2710 PAJ_RS15095 3278796 3279368 + osmotically-inducible protein OsmY gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15095 PAJ_RS15100 PAJ_2711 PAJ_RS15100 3279568 3280272 - hypothetical protein gene gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15100 PAJ_RS15105 PAJ_2712 PAJ_RS15105 3280402 3281325 + LysR family transcriptional regulator gene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15105 PAJ_RS15110 PAJ_2713 PAJ_RS15110 3281329 3283239 - transcription antiterminator BglG gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15110 PAJ_RS15115 PAJ_2714 PAJ_RS15115 3283366 3284106 - 2-dehydro-3-deoxyphosphooctonate aldolase gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15115 PAJ_RS15120 PAJ_2715 PAJ_RS15120 3284108 3285223 - L-seryl-tRNA selenium transferase gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15120 PAJ_RS15125 PAJ_2716 PAJ_RS15125 3285207 3286340 - dihydroorotase Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides gene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15125 PAJ_RS15130 PAJ_2717 PAJ_RS15130 3286395 3287039 - membrane protein gene gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15130 PAJ_RS15135 PAJ_2718 PAJ_RS15135 3287053 3287829 - membrane protein gene gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15135 PAJ_RS15140 PAJ_RS15140 PAJ_RS15140 3287863 3288159 - hypothetical protein gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15140 PAJ_RS15145 PAJ_RS15145 PAJ_RS15145 3288163 3288519 - hypothetical protein gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15145 PAJ_RS15150 PAJ_RS15150 PAJ_RS15150 3288547 3288891 - glycine dehydrogenase gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15150 PAJ_RS15155 PAJ_2719 PAJ_RS15155 3289186 3290622 - membrane protein gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15155 PAJ_RS15160 PAJ_2720 PAJ_RS15160 3290668 3292062 - membrane protein gene gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15160 PAJ_RS15165 PAJ_2721 PAJ_RS15165 3292109 3293002 - hypothetical protein gene gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15165 PAJ_RS15170 PAJ_2722 PAJ_RS15170 3293017 3295074 - alpha-glucosidase gene gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15170 PAJ_RS15175 PAJ_2723 PAJ_RS15175 3295109 3295957 - aldose 1-epimerase gene gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15175 PAJ_RS15180 PAJ_2724 PAJ_RS15180 3295991 3297232 - sugar isomerase gene gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15180 PAJ_RS15185 PAJ_2725 PAJ_RS15185 3297246 3298121 - aldolase gene gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15185 PAJ_RS15190 PAJ_2726 PAJ_RS15190 3298145 3299041 - NADH-dependent gamma-hydroxybutyrate dehydrogenase catalyzes the formation of gamma hydroxybutyrate from succinate semialdehyde gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15190 PAJ_RS15195 PAJ_2727 PAJ_RS15195 3299207 3300103 + ribokinase gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15195 PAJ_RS15200 PAJ_2728 PAJ_RS15200 3300096 3300935 + DeoR family transcriptional regulator gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15200 PAJ_RS15205 PAJ_2729 PAJ_RS15205 3300972 3301358 - cytochrome B562 gene gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15205 PAJ_RS15210 PAJ_2730 pmbA pmbA 3301454 3302794 - metalloprotease PmbA protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD gene gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15210 PAJ_RS15215 PAJ_2731 PAJ_RS15215 3302908 3303453 + hypothetical protein gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15215 PAJ_RS15220 PAJ_2732 PAJ_RS15220 3303539 3304894 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15220 PAJ_RS15225 PAJ_2733 PAJ_RS15225 3305062 3306069 + fructose-bisphosphatase catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15225 PAJ_RS15230 PAJ_2734 PAJ_RS15230 3306104 3307663 - methyl-accepting chemotaxis protein gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15230 PAJ_RS15235 PAJ_RS15235 PAJ_RS15235 3307843 3308253 + hypothetical protein gene gene3046 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15235 PAJ_RS15240 PAJ_2735 PAJ_RS15240 3308314 3308763 + membrane protein gene gene3047 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15240 PAJ_RS15245 PAJ_2736 PAJ_RS15245 3308864 3309394 + inorganic pyrophosphatase catalyzes the hydrolysis of pyrophosphate to phosphate gene gene3048 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15245 PAJ_RS15250 PAJ_2737 PAJ_RS15250 3309538 3311019 - hypothetical protein gene gene3049 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15250 PAJ_RS15255 PAJ_2738 PAJ_RS15255 3311368 3311724 - gamma-glutamylcyclotransferase gene gene3050 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15255 PAJ_RS15260 PAJ_2739 PAJ_RS15260 3311727 3315494 - hypothetical protein gene gene3051 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15260 PAJ_RS15265 PAJ_2740 PAJ_RS15265 3315491 3317230 - membrane protein gene gene3052 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15265 PAJ_RS15270 PAJ_2741 PAJ_RS15270 3317720 3319039 + membrane protein gene gene3053 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15270 PAJ_RS15275 PAJ_RS15275 PAJ_RS15275 3319072 3319278 - hypothetical protein gene gene3054 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15275 PAJ_RS15280 PAJ_2743 PAJ_RS15280 3319592 3320149 + hypothetical protein gene gene3055 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15280 PAJ_RS15285 PAJ_2744 PAJ_RS15285 3320187 3320930 - 3'(2')%2C5'-bisphosphate nucleotidase CysQ catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate gene gene3056 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15285 PAJ_RS15290 PAJ_2745 cpdB cpdB 3321225 3323165 + 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate gene gene3057 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15290 PAJ_RS15295 PAJ_2746 PAJ_RS15295 3323202 3323822 - peptidyl-prolyl cis-trans isomerase FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides gene gene3058 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15295 PAJ_RS15300 PAJ_2747 PAJ_RS15300 3324160 3324708 + hypothetical protein gene gene3059 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15300 PAJ_RS15305 PAJ_RS15305 PAJ_RS15305 3324724 3325706 - multidrug DMT transporter frameshifted%3B internal stop gene gene3060 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15305 PAJ_RS15310 PAJ_2748 rplI rplI 3325829 3326278 - 50S ribosomal protein L9 in Escherichia coli this protein is wrapped around the base of the L1 stalk gene gene3061 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15310 PAJ_RS15315 PAJ_2749 rpsR rpsR 3326317 3326544 - 30S ribosomal protein S18 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit gene gene3062 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15315 PAJ_RS15320 PAJ_2750 PAJ_RS15320 3326549 3326866 - primosomal replication protein N binds single-stranded DNA at the primosome assembly site gene gene3063 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15320 PAJ_RS15325 PAJ_2751 rpsF rpsF 3326873 3327268 - 30S ribosomal protein S6 binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21 gene gene3064 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15325 PAJ_RS15330 PAJ_2752 PAJ_RS15330 3327542 3328291 - esterase YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo gene gene3065 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15330 PAJ_RS15335 PAJ_2753 PAJ_RS15335 3328448 3330379 + methyl-accepting chemotaxis protein I Tsr gene gene3066 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15335 PAJ_RS15340 PAJ_2754 PAJ_RS15340 3330437 3330763 + bioflm peroxide resistance protein BsmA in Escherichia coli%2C mutation of this gene affects biofilm maturation%2C stress response%2C and motility gene gene3067 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15340 PAJ_RS15345 PAJ_2755 PAJ_RS15345 3330737 3332365 - isovaleryl-CoA dehydrogenase catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA gene gene3068 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15345 PAJ_RS15350 PAJ_2756 PAJ_RS15350 3332451 3333184 - 23S rRNA methyltransferase Specifically methylates the ribose of guanosine 2251 in 23S rRNA%3B frameshifted gene gene3069 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15350 PAJ_RS15355 PAJ_2757 PAJ_RS15355 3333253 3335688 - exoribonuclease R 3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs gene gene3070 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15355 PAJ_RS15360 PAJ_2758 PAJ_RS15360 3335705 3336148 - transcriptional regulator negatively regulates the transcription of genes upregulated by nitrosative stress gene gene3071 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15360 PAJ_RS15365 PAJ_2759 PAJ_RS15365 3336370 3337668 - adenylosuccinate synthase catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis gene gene3072 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15365 PAJ_RS15370 PAJ_2760 PAJ_RS15370 3337835 3338035 - membrane protein gene gene3073 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15370 PAJ_RS15375 PAJ_2761 PAJ_RS15375 3338091 3339095 - protease modulator HflC with HflK inhibits proteolysis of lambda cII protein by FtsH gene gene3074 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15375 PAJ_RS15380 PAJ_2762 PAJ_RS15380 3339099 3340331 - protease modulator HflK with HflC inhibits proteolysis of lambda cII protein by FtsH gene gene3075 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15380 PAJ_RS15385 PAJ_2763 PAJ_RS15385 3340498 3341778 - GTPase HflX involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein gene gene3076 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15385 PAJ_RS15390 PAJ_2764 hfq hfq 3341854 3342168 - RNA-binding protein Hfq HF-I%2C host factor for RNA phage Q beta replication gene gene3077 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15390 PAJ_RS15395 PAJ_2765 miaA miaA 3342273 3343223 - tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity gene gene3078 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15395 PAJ_RS15400 PAJ_2766 PAJ_RS15400 3343216 3345054 - DNA mismatch repair protein MutL gene gene3079 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15400 PAJ_RS15405 PAJ_2767 PAJ_RS15405 3345104 3346780 - N-acetylmuramoyl-L-alanine amidase gene gene3080 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15405 PAJ_RS15410 PAJ_2768 PAJ_RS15410 3346777 3347253 - tRNA (N6-adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase TsaE needed for nucleoid integrity%3B possibly involved in cell wall synthesis gene gene3081 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15410 PAJ_RS15415 PAJ_2769 PAJ_RS15415 3347250 3348704 - bifunctional ADP-dependent (S)-NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase gene gene3082 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15415 PAJ_RS15420 PAJ_2770 PAJ_RS15420 3348769 3349908 + tRNA epoxyqueuosine(34) reductase QueG gene gene3083 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15420 PAJ_RS15425 PAJ_t0050 PAJ_RS15425 3350248 3350323 - tRNA-Gly tRNA gene3084 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15425 PAJ_RS15430 PAJ_t0051 PAJ_RS15430 3350350 3350425 - tRNA-Gly tRNA gene3085 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15430 PAJ_RS15435 PAJ_t0052 PAJ_RS15435 3350451 3350526 - tRNA-Gly tRNA gene3086 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15435 PAJ_RS15440 PAJ_2771 PAJ_RS15440 3350680 3351228 - oligoribonuclease 3'-5' exoribonuclease specific for small oligoribonuclotides gene gene3087 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15440 PAJ_RS15445 PAJ_RS15445 PAJ_RS15445 3351328 3352378 + ribosome biogenesis GTPase RsgA EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity%3B frameshifted gene gene3088 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15445 PAJ_RS15450 PAJ_2773 PAJ_RS15450 3352471 3353367 + phosphatidylserine decarboxylase gene gene3089 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15450 PAJ_RS15455 PAJ_2774 PAJ_RS15455 3353379 3356708 + miniconductance mechanosensitive channel MscM gene gene3090 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15455 PAJ_RS15460 PAJ_2775 PAJ_RS15460 3356756 3357694 - malate dehydrogenase oxidizes malate to oxaloacetate gene gene3091 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15460 PAJ_RS15465 PAJ_2776 PAJ_RS15465 3358247 3358717 + arginine repressor regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes gene gene3092 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15465 PAJ_RS15470 PAJ_2777 PAJ_RS15470 3359212 3359475 + membrane protein gene gene3093 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15470 PAJ_RS15475 PAJ_RS15475 PAJ_RS15475 3359550 3359822 + membrane protein gene gene3094 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15475 PAJ_RS15480 PAJ_RS15480 PAJ_RS15480 3359914 3360177 + membrane protein gene gene3095 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15480 PAJ_RS15485 PAJ_2778 PAJ_RS15485 3360437 3361405 - hypothetical protein gene gene3096 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15485 PAJ_RS15490 PAJ_RS15490 PAJ_RS15490 3361549 3361824 - hypothetical protein gene gene3097 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15490 PAJ_RS15495 PAJ_2780 gabD gabD 3361880 3363334 - NAD-dependent succinate-semialdehyde dehydrogenase catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent gene gene3098 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15495 PAJ_RS15500 PAJ_2781 PAJ_RS15500 3363445 3365397 - p-hydroxybenzoic acid efflux pump subunit AaeB with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate gene gene3099 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15500 PAJ_RS15505 PAJ_RS15505 PAJ_RS15505 3365407 3366339 - hydroxybenzoic acid transporter with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate gene gene3100 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15505 PAJ_RS15510 PAJ_2783 PAJ_RS15510 3366347 3366550 - electron transfer flavoprotein FixA membrane protein AaeX%3B the gene is a member of the aaeXAB operon gene gene3101 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15510 PAJ_RS15515 PAJ_2784 PAJ_RS15515 3366781 3367698 + transcriptional regulator for aaeXAB operon gene gene3102 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15515 PAJ_RS15520 PAJ_2785 tldD tldD 3367731 3369176 - metalloprotease TldD responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA gene gene3103 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15520 PAJ_RS15525 PAJ_2786 PAJ_RS15525 3369242 3373075 - TIGR02099 family protein gene gene3104 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15525 PAJ_RS15530 PAJ_2787 PAJ_RS15530 3373208 3374677 - ribonuclease G involved in the processing of the 5'end of 16S rRNA gene gene3105 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15530 PAJ_RS15535 PAJ_2788 PAJ_RS15535 3374679 3375260 - septum formation protein Maf Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell gene gene3106 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15535 PAJ_RS15540 PAJ_2789 PAJ_RS15540 3375269 3375757 - rod shape-determining protein MreD part of cell wall structural complex MreBCD%3B transmembrane component gene gene3107 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15540 PAJ_RS15545 PAJ_2790 PAJ_RS15545 3375754 3376776 - rod shape-determining protein MreC in some organisms this protein is a transmembrane protein while in others it is periplasmic%3B involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall gene gene3108 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15545 PAJ_RS15550 PAJ_2791 PAJ_RS15550 3376924 3377967 - rod shape-determining protein gene gene3109 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15550 PAJ_RS15555 PAJ_2792 PAJ_RS15555 3378277 3380226 - RNase E specificity factor CsrD regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules gene gene3110 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15555 PAJ_RS15560 PAJ_2793 PAJ_RS15560 3380512 3381516 + mononuclear molybdenum enzyme YedY in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B requires inner membrane anchor protein YedZ gene gene3111 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15560 PAJ_RS15565 PAJ_2794 PAJ_RS15565 3381517 3382119 + sulfoxide reductase heme-binding subunit YedZ in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme gene gene3112 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15565 PAJ_RS15570 PAJ_2795 PAJ_RS15570 3382341 3382793 + 3-dehydroquinate dehydratase catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis gene gene3113 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15570 PAJ_RS15575 PAJ_2796 PAJ_RS15575 3382819 3383283 + acetyl-CoA carboxylase biotin carboxyl carrier protein subunit composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism gene gene3114 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15575 PAJ_RS15580 PAJ_2797 PAJ_RS15580 3383295 3384644 + acetyl-CoA carboxylase biotin carboxylase subunit an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism gene gene3115 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15580 PAJ_RS15585 PAJ_2798 PAJ_RS15585 3384717 3384959 + membrane protein gene gene3116 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15585 PAJ_RS15590 PAJ_2799 panF panF 3384949 3386394 + sodium/panthothenate symporter mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase gene gene3117 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15590 PAJ_RS15595 PAJ_2800 prmA prmA 3386410 3387294 + ribosomal protein L11 methyltransferase methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype gene gene3118 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15595 PAJ_RS15600 PAJ_2801 PAJ_RS15600 3387706 3388671 + tRNA dihydrouridine synthase DusB gene gene3119 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15600 PAJ_RS15605 PAJ_2802 fis fis 3388695 3388991 + Fis family transcriptional regulator Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription gene gene3120 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15605 PAJ_RS15610 PAJ_2803 PAJ_RS15610 3389536 3390561 + amino acid ABC transporter substrate-binding protein gene gene3121 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15610 PAJ_RS15615 PAJ_2804 PAJ_RS15615 3390632 3391810 + amino acid ABC transporter permease gene gene3122 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15615 PAJ_RS15620 PAJ_2805 PAJ_RS15620 3391826 3392926 + amino acid ABC transporter permease gene gene3123 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15620 PAJ_RS15625 PAJ_2806 PAJ_RS15625 3392934 3393692 + arginine ABC transporter ATP-binding protein gene gene3124 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15625 PAJ_RS15630 PAJ_r0007 rrf rrf 3394045 3394160 - 5S ribosomal RNA rRNA gene3125 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15630 PAJ_RS15635 PAJ_t0053 PAJ_RS15635 3394198 3394273 - tRNA-Thr tRNA gene3126 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15635 PAJ_RS15640 PAJ_r0008 rrf rrf 3394463 3394578 - 5S ribosomal RNA rRNA gene3127 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15640 PAJ_RS15645 PAJ_r0009 PAJ_RS15645 3394787 3397722 - 23S ribosomal RNA rRNA gene3128 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15645 PAJ_RS15650 PAJ_t0054 PAJ_RS15650 3397951 3398026 - tRNA-Glu tRNA gene3129 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15650 PAJ_RS15655 PAJ_r0010 PAJ_RS15655 3398184 3399731 - 16S ribosomal RNA rRNA gene3130 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15655 PAJ_RS15660 PAJ_2807 PAJ_RS15660 3400222 3400788 + gamma carbonic anhydrase family protein gene gene3131 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15660 PAJ_RS15665 PAJ_2808 PAJ_RS15665 3400997 3401815 - shikimate dehydrogenase gene gene3132 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15665 PAJ_RS15670 PAJ_2809 PAJ_RS15670 3401819 3402391 - L-threonylcarbamoyladenylate synthase TsaC involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs gene gene3133 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15670 PAJ_RS15675 PAJ_2810 PAJ_RS15675 3402401 3402946 - hypothetical protein gene gene3134 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15675 PAJ_RS15680 PAJ_2811 PAJ_RS15680 3402969 3403442 - hypothetical protein gene gene3135 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15680 PAJ_RS15685 PAJ_2812 PAJ_RS15685 3403414 3404538 - DNA processing protein DprA gene gene3136 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15685 PAJ_RS15690 PAJ_2813 PAJ_RS15690 3404656 3405168 + peptide deformylase gene gene3137 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15690 PAJ_RS15695 PAJ_2814 fmt fmt 3405189 3406133 + methionyl-tRNA formyltransferase modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth gene gene3138 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15695 PAJ_RS15700 PAJ_2815 PAJ_RS15700 3406181 3407482 + 16S rRNA m5C967 methyltransferase catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase gene gene3139 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15700 PAJ_RS15705 PAJ_2816 trkA trkA 3407500 3408876 + Trk system potassium transport protein TrkA involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain gene gene3140 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15705 PAJ_RS15710 PAJ_2817 mscL mscL 3408984 3409394 + large-conductance mechanosensitive channel forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock gene gene3141 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15710 PAJ_RS15715 PAJ_2818 PAJ_RS15715 3409369 3409629 - hypothetical protein gene gene3142 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15715 PAJ_RS15720 PAJ_2819 PAJ_RS15720 3409715 3410083 - hypothetical protein gene gene3143 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15720 PAJ_RS15725 PAJ_2820 rplQ rplQ 3410177 3410563 - 50S ribosomal protein L17 is a component of the macrolide binding site in the peptidyl transferase center gene gene3144 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15725 PAJ_RS15730 PAJ_2821 PAJ_RS15730 3410604 3411593 - DNA-directed RNA polymerase subunit alpha catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme gene gene3145 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15730 PAJ_RS15735 PAJ_2822 PAJ_RS15735 3411619 3412240 - 30S ribosomal protein S4 gene gene3146 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15735 PAJ_RS15740 PAJ_2823 PAJ_RS15740 3412274 3412663 - 30S ribosomal protein S11 gene gene3147 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15740 PAJ_RS15745 PAJ_2824 PAJ_RS15745 3412680 3413036 - 30S ribosomal protein S13 gene gene3148 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15745 PAJ_RS15750 PAJ_2825 PAJ_RS15750 3413181 3413297 - 50S ribosomal protein L36 gene gene3149 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15750 PAJ_RS15755 PAJ_2826 secY secY 3413330 3414661 - preprotein translocase subunit SecY forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase gene gene3150 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15755 PAJ_RS15760 PAJ_2827 PAJ_RS15760 3414669 3415103 - 50S ribosomal protein L15 gene gene3151 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15760 PAJ_RS15765 PAJ_2828 rpmD rpmD 3415107 3415286 - 50S ribosomal protein L30 L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7 gene gene3152 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15765 PAJ_RS15770 PAJ_2829 PAJ_RS15770 3415292 3415792 - 30S ribosomal protein S5 gene gene3153 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15770 PAJ_RS15775 PAJ_2830 PAJ_RS15775 3415807 3416160 - 50S ribosomal protein L18 gene gene3154 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15775 PAJ_RS15780 PAJ_2832 PAJ_RS15780 3416170 3416703 - 50S ribosomal protein L6 gene gene3155 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15780 PAJ_RS15785 PAJ_2833 PAJ_RS15785 3416717 3417109 - 30S ribosomal protein S8 gene gene3156 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15785 PAJ_RS15790 PAJ_2834 rpsN rpsN 3417142 3417447 - 30S ribosomal protein S14 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif gene gene3157 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15790 PAJ_RS15795 PAJ_2835 PAJ_RS15795 3417462 3418001 - 50S ribosomal protein L5 gene gene3158 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15795 PAJ_RS15800 PAJ_2836 rplX rplX 3418016 3418330 - 50S ribosomal protein L24 assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel gene gene3159 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15800 PAJ_RS15805 PAJ_2837 PAJ_RS15805 3418341 3418712 - 50S ribosomal protein L14 gene gene3160 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15805 PAJ_RS15810 PAJ_2838 PAJ_RS15810 3418881 3419135 - 30S ribosomal protein S17 gene gene3161 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15810 PAJ_RS15815 PAJ_2839 PAJ_RS15815 3419135 3419326 - 50S ribosomal protein L29 one of the stabilizing components for the large ribosomal subunit gene gene3162 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15815 PAJ_RS15820 PAJ_2840 PAJ_RS15820 3419326 3419736 - 50S ribosomal protein L16 gene gene3163 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15820 PAJ_RS15825 PAJ_2841 PAJ_RS15825 3419748 3420446 - 30S ribosomal protein S3 gene gene3164 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15825 PAJ_RS15830 PAJ_2842 rplV rplV 3420464 3420796 - 50S ribosomal protein L22 binds specifically to 23S rRNA during the early stages of 50S assembly%3B makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome%3B mutations in this gene result in erythromycin resistance%3B located near peptidyl-transferase center gene gene3165 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15830 PAJ_RS15835 PAJ_2843 PAJ_RS15835 3420810 3421088 - 30S ribosomal protein S19 gene gene3166 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15835 PAJ_RS15840 PAJ_2845 PAJ_RS15840 3421105 3421926 - 50S ribosomal protein L2 gene gene3167 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15840 PAJ_RS15845 PAJ_2846 rplW rplW 3421944 3422246 - 50S ribosomal protein L23 binds third domain of 23S rRNA and protein L29%3B part of exit tunnel gene gene3168 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15845 PAJ_RS15850 PAJ_2847 rplD rplD 3422243 3422848 - 50S ribosomal protein L4 L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA gene gene3169 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15850 PAJ_RS15855 PAJ_2848 PAJ_RS15855 3422859 3423488 - 50S ribosomal protein L3 gene gene3170 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15855 PAJ_RS15860 PAJ_2849 rpsJ rpsJ 3423521 3423832 - 30S ribosomal protein S10 NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex gene gene3171 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15860 PAJ_RS15865 PAJ_2850 PAJ_RS15865 3424233 3425006 + TapD gene gene3172 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15865 PAJ_RS15870 PAJ_2851 PAJ_RS15870 3424993 3425466 - bacterioferritin iron storage protein gene gene3173 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15870 PAJ_RS15875 PAJ_RS15875 PAJ_RS15875 3425531 3425842 + hypothetical protein gene gene3174 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15875 PAJ_RS15880 PAJ_2853 tuf tuf 3425947 3427131 - elongation factor Tu EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu gene gene3175 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15880 PAJ_RS15885 PAJ_2854 fusA fusA 3427200 3429314 - elongation factor G EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene gene gene3176 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15885 PAJ_RS15890 PAJ_2855 PAJ_RS15890 3429408 3429878 - 30S ribosomal protein S7 gene gene3177 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15890 PAJ_RS15895 PAJ_2856 PAJ_RS15895 3429975 3430349 - 30S ribosomal protein S12 gene gene3178 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15895 PAJ_RS15900 PAJ_2857 PAJ_RS15900 3430478 3430765 - tRNA 2-thiouridine(34) synthase TusB in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs gene gene3179 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15900 PAJ_RS15905 PAJ_2858 PAJ_RS15905 3430775 3431134 - sulfurtransferase in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur transfer that results in thiouridation to U34 position in some tRNAs gene gene3180 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15905 PAJ_RS15910 PAJ_2859 PAJ_RS15910 3431134 3431520 - sulfurtransferase in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs gene gene3181 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15910 PAJ_RS15915 PAJ_2860 PAJ_RS15915 3431520 3432242 - hypothetical protein gene gene3182 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15915 PAJ_RS15920 PAJ_2861 PAJ_RS15920 3432402 3433238 - peptidylprolyl isomerase rotamase gene gene3183 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15920 PAJ_RS15925 PAJ_2862 PAJ_RS15925 3433509 3433727 + lysis protein required for phi X174 lysis gene gene3184 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15925 PAJ_RS15930 PAJ_2863 PAJ_RS15930 3433812 3434372 - peptidyl-prolyl cis-trans isomerase rotamase gene gene3185 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15930 PAJ_RS15935 PAJ_2864 PAJ_RS15935 3434569 3434763 - hypothetical protein gene gene3186 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15935 PAJ_RS15940 PAJ_2865 PAJ_RS15940 3434787 3436592 - glutathione-regulated potassium-efflux system protein KefB involved in potassium efflux gene gene3187 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15940 PAJ_RS15945 PAJ_2866 PAJ_RS15945 3436593 3437144 - glutathione-regulated potassium-efflux system ancillary protein KefG required for KefB activity gene gene3188 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15945 PAJ_RS15950 PAJ_2867 PAJ_RS15950 3437256 3439160 + ABC transporter ATP-binding protein gene gene3189 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15950 PAJ_RS15955 PAJ_2868 tauD tauD 3439226 3440065 - taurine dioxygenase catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers gene gene3190 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15955 PAJ_RS15960 PAJ_2869 PAJ_RS15960 3440062 3440892 - taurine ABC transporter permease gene gene3191 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15960 PAJ_RS15965 PAJ_2870 tauB tauB 3440889 3441656 - taurine transporter ATP-binding subunit Part of the ABC transporter complex tauABC involved in taurine import gene gene3192 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15965 PAJ_RS15970 PAJ_2871 tauA tauA 3441667 3442644 - taurine ABC transporter substrate-binding protein with TauB and TauC is responsible for taurine uptake. gene gene3193 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15970 PAJ_RS15975 PAJ_2872 PAJ_RS15975 3442878 3443858 + cytochrome-c peroxidase gene gene3194 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15975 PAJ_RS15980 PAJ_2873 PAJ_RS15980 3443861 3444463 - alcohol dehydrogenase gene gene3195 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15980 PAJ_RS15985 PAJ_2874 PAJ_RS15985 3444518 3445534 + hydrolase gene gene3196 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15985 PAJ_RS15990 PAJ_2875 PAJ_RS15990 3445539 3445757 + hypothetical protein gene gene3197 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15990 PAJ_RS15995 PAJ_2876 PAJ_RS15995 3445973 3446689 + phosphoribulokinase gene gene3198 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS15995 PAJ_RS16000 PAJ_2877 PAJ_RS16000 3446719 3447123 - hypothetical protein gene gene3199 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16000 PAJ_RS16005 PAJ_2878 PAJ_RS16005 3447427 3448059 + cAMP-activated global transcriptional regulator CRP cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons gene gene3200 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16005 PAJ_RS16010 PAJ_2879 PAJ_RS16010 3448118 3450193 + membrane protein gene gene3201 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16010 PAJ_RS16015 PAJ_2880 argD argD 3450195 3451415 - acetylornithine aminotransferase DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate gene gene3202 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16015 PAJ_RS16020 PAJ_2881 PAJ_RS16020 3451504 3452079 - glutamine amidotransferase TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity gene gene3203 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16020 PAJ_RS16025 PAJ_2882 PAJ_RS16025 3452250 3452849 - cell filamentation protein Fic gene gene3204 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16025 PAJ_RS16030 PAJ_2884 PAJ_RS16030 3453088 3453660 - peptidylprolyl isomerase gene gene3205 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16030 PAJ_RS16035 PAJ_2885 PAJ_RS16035 3453921 3455099 + MFS transporter TsgA gene gene3206 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16035 PAJ_RS16040 PAJ_2886 PAJ_RS16040 3455134 3456417 - cytosine deaminase Catalyzes the deamination of cytosine to uracil and ammonia gene gene3207 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16040 PAJ_RS16045 PAJ_2887 PAJ_RS16045 3456693 3457697 - tryptophan--tRNA ligase gene gene3208 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16045 PAJ_RS16050 PAJ_2888 PAJ_RS16050 3457715 3458392 - phosphoglycolate phosphatase catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate gene gene3209 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16050 PAJ_RS16055 PAJ_2889 PAJ_RS16055 3458376 3459059 - ribulose-phosphate 3-epimerase gene gene3210 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16055 PAJ_RS16060 PAJ_2890 PAJ_RS16060 3459126 3459938 - DNA adenine methylase gene gene3211 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16060 PAJ_RS16065 PAJ_2891 PAJ_RS16065 3460035 3461087 - cell division protein DamX gene gene3212 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16065 PAJ_RS16070 PAJ_2892 aroB aroB 3461159 3462247 - 3-dehydroquinate synthase catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis gene gene3213 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16070 PAJ_RS16075 PAJ_2893 aroK aroK 3462286 3462807 - shikimate kinase I type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis gene gene3214 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16075 PAJ_RS16080 PAJ_2894 hofQ hofQ 3463151 3464365 - porin outer membrane porin probably involved in uptake of extracellular double-stranded DNA%3B similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa gene gene3215 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16080 PAJ_RS16085 PAJ_RS16085 PAJ_RS16085 3464376 3464768 - hypothetical protein gene gene3216 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16085 PAJ_RS16090 PAJ_2895 PAJ_RS16090 3464755 3465231 - hypothetical protein gene gene3217 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16090 PAJ_RS16095 PAJ_2896 PAJ_RS16095 3465236 3465778 - hypothetical protein gene gene3218 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16095 PAJ_RS16100 PAJ_2897 PAJ_RS16100 3465778 3466581 - pilus assembly protein HofM gene gene3219 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16100 PAJ_RS16105 PAJ_2898 mrcA mrcA 3466698 3469250 + carboxypeptidase/penicillin-binding protein 1A bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits gene gene3220 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16105 PAJ_RS16110 PAJ_2899 nudE nudE 3469306 3469872 - ADP compounds hydrolase NudE ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose gene gene3221 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16110 PAJ_RS16115 PAJ_2900 PAJ_RS16115 3470255 3472390 + intracellular growth attenuator protein IgaA gene gene3222 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16115 PAJ_RS16120 PAJ_2901 PAJ_RS16120 3472444 3473112 + GMP/IMP nucleotidase gene gene3223 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16120 PAJ_RS16125 PAJ_2902 PAJ_RS16125 3473109 3473510 + heat-shock protein Hsp15 gene gene3224 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16125 PAJ_RS16130 PAJ_2903 hslO hslO 3473556 3474422 + molecular chaperone Hsp33 becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers gene gene3225 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16130 PAJ_RS16135 PAJ_2904 PAJ_RS16135 3474703 3476322 + phosphoenolpyruvate carboxykinase (ATP) PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP gene gene3226 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16135 PAJ_RS16140 PAJ_2905 envZ envZ 3476361 3477725 - two-component sensor histidine kinase membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR gene gene3227 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16140 PAJ_RS16145 PAJ_2906 ompR ompR 3477722 3478441 - DNA-binding response regulator part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation gene gene3228 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16145 PAJ_RS16150 PAJ_2907 PAJ_RS16150 3478977 3479225 + membrane protein gene gene3229 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16150 PAJ_RS16155 PAJ_2908 greB greB 3479389 3479865 + transcription elongation factor GreB necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus gene gene3230 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16155 PAJ_RS16160 PAJ_2909 PAJ_RS16160 3479965 3482289 + transcription accessory protein gene gene3231 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16160 PAJ_RS16165 PAJ_2910 PAJ_RS16165 3482572 3484257 + sucrose phosphorylase gene gene3232 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16165 PAJ_RS16170 PAJ_2911 PAJ_RS16170 3484258 3484527 - hypothetical protein gene gene3233 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16170 PAJ_RS16175 PAJ_2912 PAJ_RS16175 3484697 3485473 - pimeloyl-[acyl-carrier protein] methyl ester esterase Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis gene gene3234 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16175 PAJ_RS16180 PAJ_2913 PAJ_RS16180 3485508 3486188 + DNA utilization protein GntX gene gene3235 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16180 PAJ_RS16185 PAJ_2914 PAJ_RS16185 3486247 3486822 + Fe-S biogenesis protein NfuA cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source gene gene3236 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16185 PAJ_RS16190 PAJ_2915 malQ malQ 3486860 3488932 - 4-alpha-glucanotransferase amylomaltase%3B acts to release glucose from maltodextrins gene gene3237 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16190 PAJ_RS16195 PAJ_2916 PAJ_RS16195 3488942 3491347 - maltodextrin phosphorylase gene gene3238 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16195 PAJ_RS16200 PAJ_2917 PAJ_RS16200 3491501 3492259 - transcriptional regulator represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism gene gene3239 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16200 PAJ_RS16205 PAJ_2918 PAJ_RS16205 3492299 3493117 - rhomboid family intramembrane serine protease GlpG protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity gene gene3240 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16205 PAJ_RS16210 PAJ_2919 PAJ_RS16210 3493147 3493473 - thiosulfate sulfurtransferase gene gene3241 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16210 PAJ_RS16215 PAJ_2920 glpD glpD 3493700 3495205 + glycerol-3-phosphate dehydrogenase in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane gene gene3242 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16215 PAJ_RS16220 PAJ_RS16220 PAJ_RS16220 3495523 3495705 - hypothetical protein gene gene3243 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16220 PAJ_RS16225 PAJ_2921 PAJ_RS16225 3496330 3498777 - glycogen phosphorylase gene gene3244 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16225 PAJ_RS16230 PAJ_2922 glgA glgA 3498796 3500229 - starch synthase catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose gene gene3245 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16230 PAJ_RS16235 PAJ_2923 glgC glgC 3500293 3501585 - glucose-1-phosphate adenylyltransferase catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate gene gene3246 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16235 PAJ_RS16240 PAJ_2924 PAJ_RS16240 3501599 3503575 - glycogen debranching enzyme catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen gene gene3247 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16240 PAJ_RS16245 PAJ_2925 PAJ_RS16245 3503575 3505758 - glycogen-branching enzyme gene gene3248 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16245 PAJ_RS16250 PAJ_2926 PAJ_RS16250 3506649 3507758 - aspartate-semialdehyde dehydrogenase catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde gene gene3249 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16250 PAJ_RS16255 PAJ_2927 PAJ_RS16255 3507978 3508571 + membrane protein gene gene3250 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16255 PAJ_RS16260 PAJ_2928 PAJ_RS16260 3508616 3509956 - gluconate transporter gene gene3251 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16260 PAJ_RS16265 PAJ_2929 gntK gntK 3509960 3510496 - gluconate kinase thermoresistant%3B catalyzes the formation of 6-phospho-D-gluconate from gluconate gene gene3252 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16265 PAJ_RS16270 PAJ_2930 PAJ_RS16270 3510638 3511633 - transcriptional regulator gene gene3253 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16270 PAJ_RS16275 PAJ_2931 PAJ_RS16275 3511733 3512428 - quercetin 2%2C3-dioxygenase gene gene3254 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16275 PAJ_RS16280 PAJ_2932 PAJ_RS16280 3512792 3513286 + acetyltransferase gene gene3255 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16280 PAJ_RS16285 PAJ_2933 ggt ggt 3513320 3515071 - gamma-glutamyltransferase periplasmic enzyme%3B post-translationally processed into two subunits which are required for wild-type enzyme activity%3B cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides gene gene3256 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16285 PAJ_RS16290 PAJ_2934 PAJ_RS16290 3515275 3515562 + hypothetical protein gene gene3257 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16290 PAJ_RS16295 PAJ_2935 ugpQ ugpQ 3515559 3516302 - glycerophosphoryl diester phosphodiesterase hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate gene gene3258 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16295 PAJ_RS16300 PAJ_2936 ugpC ugpC 3516299 3517372 - glycerol-3-phosphate ABC transporter ATP-binding protein part of the UgpABCE glycerol-3-phosphate uptake system gene gene3259 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16300 PAJ_RS16305 PAJ_2937 PAJ_RS16305 3517375 3518220 - glycerol-3-phosphate transporter membrane protein with UgpABC is involved in uptake of glycerol-3-phosphate gene gene3260 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16305 PAJ_RS16310 PAJ_2938 PAJ_RS16310 3518217 3519104 - glycerol-3-phosphate transporter permease with UgpEC is involved in the uptake of glycerol-3-phosphate gene gene3261 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16310 PAJ_RS16315 PAJ_2939 PAJ_RS16315 3519160 3520476 - sn-glycerol-3-phosphate ABC transporter substrate-binding protein with UgpACE is involved in the uptake of glycerol-3-phosphate gene gene3262 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16315 PAJ_RS16320 PAJ_2940 livF livF 3520750 3521457 - ABC transporter ATP-binding protein with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine gene gene3263 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16320 PAJ_RS16325 PAJ_2941 livG livG 3521459 3522226 - ABC transporter ATP-binding protein Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine gene gene3264 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16325 PAJ_RS16330 PAJ_2942 livM livM 3522223 3523494 - branched-chain amino acid ABC transporter permease Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine gene gene3265 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16330 PAJ_RS16335 PAJ_2943 PAJ_RS16335 3523491 3524417 - branched-chain amino acid ABC transporter permease LivH LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter gene gene3266 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16335 PAJ_RS16340 PAJ_2944 PAJ_RS16340 3524555 3525679 - branched chain amino acid ABC transporter substrate-binding protein with LivFGHM is involved in the high affinity leucine transport gene gene3267 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16340 PAJ_RS16345 PAJ_RS16345 PAJ_RS16345 3525861 3526085 + hypothetical protein gene gene3268 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16345 PAJ_RS16350 PAJ_2945 PAJ_RS16350 3526082 3526468 + hypothetical protein gene gene3269 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16350 PAJ_RS16355 PAJ_2946 PAJ_RS16355 3526513 3527370 - RNA polymerase factor sigma-32 binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters gene gene3270 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16355 PAJ_RS16360 PAJ_2947 ftsX ftsX 3527601 3528584 - cell division protein FtsX ABC transporter%2C membrane protein gene gene3271 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16360 PAJ_RS16365 PAJ_2948 PAJ_RS16365 3528574 3529242 - cell division protein FtsE ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions gene gene3272 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16365 PAJ_RS16370 PAJ_2949 PAJ_RS16370 3529248 3531011 - signal recognition particle-docking protein FtsY gene gene3273 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16370 PAJ_RS16375 PAJ_2950 rsmD rsmD 3531245 3531844 + 16S rRNA (guanine(966)-N(2))-methyltransferase catalyzes the methylation of 16S rRNA at position G966 gene gene3274 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16375 PAJ_RS16380 PAJ_2951 PAJ_RS16380 3531834 3532103 + membrane protein gene gene3275 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16380 PAJ_RS16385 PAJ_2952 PAJ_RS16385 3532132 3532491 - hypothetical protein gene gene3276 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16385 PAJ_RS16390 PAJ_2953 PAJ_RS16390 3532641 3533270 + membrane protein gene gene3277 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16390 PAJ_RS16395 PAJ_2954 zntA zntA 3533359 3535644 + zinc/cadmium/mercury/lead-transporting ATPase P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury gene gene3278 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16395 PAJ_RS16400 PAJ_2955 PAJ_RS16400 3535671 3535922 - sulfurtransferase TusA TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs gene gene3279 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16400 PAJ_RS16405 PAJ_2956 PAJ_RS16405 3536128 3536793 + hypothetical protein gene gene3280 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16405 PAJ_RS16410 PAJ_2957 PAJ_RS16410 3536911 3537465 + hypothetical protein gene gene3281 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16410 PAJ_RS16415 PAJ_2958 PAJ_RS16415 3537572 3539491 - 5-dehydro-2-deoxygluconokinase gene gene3282 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16415 PAJ_RS16420 PAJ_2959 PAJ_RS16420 3540005 3541894 + 3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing) gene gene3283 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16420 PAJ_RS16425 PAJ_2960 PAJ_RS16425 3541955 3542965 + inositol 2-dehydrogenase gene gene3284 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16425 PAJ_RS16430 PAJ_2961 PAJ_RS16430 3542991 3543887 + myo-inosose-2 dehydratase gene gene3285 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16430 PAJ_RS16435 PAJ_2962 PAJ_RS16435 3544127 3544978 + (Fe-S)-cluster assembly protein gene gene3286 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16435 PAJ_RS16440 PAJ_2963 PAJ_RS16440 3545524 3546342 - 5-deoxy-glucuronate isomerase gene gene3287 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16440 PAJ_RS16445 PAJ_2964 PAJ_RS16445 3546400 3547905 - methylmalonate-semialdehyde dehydrogenase (acylating) gene gene3288 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16445 PAJ_RS16450 PAJ_2965 PAJ_RS16450 3548591 3549970 + xanthine permease XanP high-affinity transporter for xanthine gene gene3289 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16450 PAJ_RS16455 PAJ_2966 PAJ_RS16455 3550236 3551291 + pheromone autoinducer 2 transporter gene gene3290 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16455 PAJ_RS16460 PAJ_2967 PAJ_RS16460 3551280 3551963 - GntR family transcriptional regulator gene gene3291 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16460 PAJ_RS16465 PAJ_2968 PAJ_RS16465 3552118 3553302 + mannonate dehydratase catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate gene gene3292 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16465 PAJ_RS16470 PAJ_2969 PAJ_RS16470 3553731 3555311 + c-di-GMP phosphodiesterase gene gene3293 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16470 PAJ_RS16475 PAJ_RS16475 PAJ_RS16475 3555362 3555682 - hypothetical protein gene gene3294 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16475 PAJ_RS16480 PAJ_2970 PAJ_RS16480 3556175 3557680 + proline/betaine transporter gene gene3295 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16480 PAJ_RS16485 PAJ_2971 PAJ_RS16485 3557810 3558787 + delta-aminolevulinic acid dehydratase gene gene3296 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16485 PAJ_RS16490 PAJ_2972 PAJ_RS16490 3559075 3559539 + TetD gene gene3297 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16490 PAJ_RS16495 PAJ_2973 PAJ_RS16495 3559556 3560215 - hypothetical protein gene gene3298 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16495 PAJ_RS16500 PAJ_2974 PAJ_RS16500 3560339 3561019 - short-chain dehydrogenase gene gene3299 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16500 PAJ_RS16505 PAJ_2975 PAJ_RS16505 3561153 3561974 - hypothetical protein gene gene3300 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16505 PAJ_RS16510 PAJ_RS16510 PAJ_RS16510 3562000 3562215 + hypothetical protein gene gene3301 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16510 PAJ_RS16515 PAJ_2976 PAJ_RS16515 3562806 3563672 + RpiR family transcriptional regulator gene gene3302 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16515 PAJ_RS16520 PAJ_2977 PAJ_RS16520 3563691 3564275 + D-alanyl-D-alanine dipeptidase catalyzes the hydrolysis of D-alanyl-D-alanine dipeptide: Zn dependent%3B involved in peptidoglycan synthesis gene gene3303 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16520 PAJ_RS16525 PAJ_2978 PAJ_RS16525 3564272 3565837 + peptide ABC transporter substrate-binding protein gene gene3304 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16525 PAJ_RS16530 PAJ_2979 PAJ_RS16530 3565892 3566908 + peptide ABC transporter permease gene gene3305 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16530 PAJ_RS16535 PAJ_2980 PAJ_RS16535 3566912 3567805 + cytochrome c550 gene gene3306 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16535 PAJ_RS16540 PAJ_2981 PAJ_RS16540 3567805 3568791 + peptide ABC transporter substrate-binding protein gene gene3307 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16540 PAJ_RS16545 PAJ_2982 PAJ_RS16545 3568784 3569734 + peptide ABC transporter ATP-binding protein gene gene3308 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16545 PAJ_RS16550 PAJ_2983 PAJ_RS16550 3569808 3571058 + D-amino acid dehydrogenase small subunit catalyzes the oxidative deamination of D-amino acids gene gene3309 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16550 PAJ_RS16555 PAJ_2984 PAJ_RS16555 3571080 3572264 - membrane protein gene gene3310 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16555 PAJ_RS16560 PAJ_2985 PAJ_RS16560 3572480 3574009 + anion permease involved in the transport of inorganic phosphate gene gene3311 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16560 PAJ_RS16565 PAJ_2986 PAJ_RS16565 3574046 3574381 - universal stress protein B ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress gene gene3312 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16565 PAJ_RS16570 PAJ_2987 PAJ_RS16570 3574805 3575242 + universal stress protein A involved in resistance to DNA-damaging agents gene gene3313 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16570 PAJ_RS16575 PAJ_2988 PAJ_RS16575 3575296 3576045 - 16S rRNA (guanine(1516)-N(2))-methyltransferase predicted SAM-dependent methyltransferase gene gene3314 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16575 PAJ_RS16580 PAJ_2989 PAJ_RS16580 3576053 3578095 - oligopeptidase A gene gene3315 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16580 PAJ_RS16585 PAJ_2990 PAJ_RS16585 3578467 3579309 + hypothetical protein gene gene3316 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16585 PAJ_RS16590 PAJ_2991 PAJ_RS16590 3579371 3580186 + CAAX amino protease gene gene3317 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16590 PAJ_RS16595 PAJ_2992 PAJ_RS16595 3580190 3581101 - ribonuclease Z RNase BN%3B member of metallo-beta-lactamase family%3B the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase%3B in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not%3B associates with two zinc ions gene gene3318 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16595 PAJ_RS16600 PAJ_2993 PAJ_RS16600 3581226 3582578 + glutathione-disulfide reductase catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense gene gene3319 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16600 PAJ_RS16605 PAJ_RS16605 PAJ_RS16605 3582638 3583768 - NagC family transcriptional regulator gene gene3320 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16605 PAJ_RS16610 PAJ_2995 PAJ_RS16610 3584068 3584841 + inositol monophosphatase SuhB gene gene3321 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16610 PAJ_RS16615 PAJ_2996 PAJ_RS16615 3585134 3586234 + ABC transporter ATP-binding protein gene gene3322 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16615 PAJ_RS16620 PAJ_2997 PAJ_RS16620 3586231 3587097 + spermidine/putrescine ABC transporter permease gene gene3323 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16620 PAJ_RS16625 PAJ_2998 PAJ_RS16625 3587097 3587933 + spermidine/putrescine ABC transporter permease gene gene3324 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16625 PAJ_RS16630 PAJ_2999 PAJ_RS16630 3587965 3589068 + ABC transporter substrate-binding protein gene gene3325 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16630 PAJ_RS16635 PAJ_3000 PAJ_RS16635 3589106 3589852 + glycerophosphoryl diester phosphodiesterase gene gene3326 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16635 PAJ_RS16640 PAJ_3001 PAJ_RS16640 3590052 3591131 + porin OmpC gene gene3327 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16640 PAJ_RS16645 PAJ_3002 PAJ_RS16645 3591238 3592173 - hypothetical protein gene gene3328 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16645 PAJ_RS16650 PAJ_RS16650 PAJ_RS16650 3592344 3592682 - hypothetical protein gene gene3329 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16650 PAJ_RS16655 PAJ_3003 PAJ_RS16655 3592713 3594056 - sodium:proton antiporter gene gene3330 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16655 PAJ_RS16660 PAJ_3004 PAJ_RS16660 3594118 3595326 - MFS transporter gene gene3331 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16660 PAJ_RS16665 PAJ_3005 PAJ_RS16665 3595420 3596352 + LysR family transcriptional regulator gene gene3332 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16665 PAJ_RS16670 PAJ_3006 PAJ_RS16670 3596414 3596917 - membrane protein gene gene3333 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16670 PAJ_RS16675 PAJ_RS16675 PAJ_RS16675 3596972 3599637 - sensor protein KdpD sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein%3B frameshifted gene gene3334 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16675 PAJ_RS16680 PAJ_3008 PAJ_RS16680 3599651 3600220 - potassium-transporting ATPase subunit C One of the components of the high-affinity ATP-driven potassium transport (or KDP)system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex gene gene3335 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16680 PAJ_RS16685 PAJ_3009 PAJ_RS16685 3600231 3602276 - potassium-transporting ATPase subunit B One of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions gene gene3336 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16685 PAJ_RS16690 PAJ_3010 PAJ_RS16690 3602279 3603961 - potassium-transporting ATPase subunit KdpA catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions gene gene3337 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16690 PAJ_RS16695 PAJ_RS16695 kdpF kdpF 3603961 3604050 - K+-transporting ATPase subunit F one of the components of the high-affinity ATP-driven potassium transport (or KDP) system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions gene gene3338 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16695 PAJ_RS16700 PAJ_3011 PAJ_RS16700 3604161 3605327 - HDIG domain-containing protein gene gene3339 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16700 PAJ_RS16705 PAJ_3012 PAJ_RS16705 3605475 3605978 - acetyltransferase gene gene3340 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16705 PAJ_RS16710 PAJ_3013 PAJ_RS16710 3606050 3607882 + multidrug ABC transporter ATP-binding protein gene gene3341 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16710 PAJ_RS16715 PAJ_3014 PAJ_RS16715 3607879 3609003 - hypothetical protein gene gene3342 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16715 PAJ_RS16720 PAJ_3015 PAJ_RS16720 3609185 3609790 + phospholipase gene gene3343 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16720 PAJ_RS16725 PAJ_RS16725 PAJ_RS16725 3609820 3610197 - fluoride ion transporter CrcB camphor resistance protein CrcB%3B may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling gene gene3344 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16725 PAJ_RS16730 PAJ_RS16730 PAJ_RS16730 3610294 3610536 + hypothetical protein gene gene3345 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16730 PAJ_RS16735 PAJ_3017 PAJ_RS16735 3610611 3611528 + hypothetical protein gene gene3346 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16735 PAJ_RS16740 PAJ_3018 PAJ_RS16740 3611562 3612590 - galactonate oxidoreductase gene gene3347 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16740 PAJ_RS16745 PAJ_3019 PAJ_RS16745 3612728 3613630 + GntR family transcriptional regulator gene gene3348 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16745 PAJ_RS16750 PAJ_3020 PAJ_RS16750 3613799 3615148 + MFS transporter gene gene3349 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16750 PAJ_RS16755 PAJ_3021 PAJ_RS16755 3615159 3616550 - hypothetical protein gene gene3350 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16755 PAJ_RS16760 PAJ_3022 PAJ_RS16760 3616543 3617490 - pimeloyl-ACP methyl ester esterase gene gene3351 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16760 PAJ_RS16765 PAJ_3023 PAJ_RS16765 3617537 3618373 - 5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase gene gene3352 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16765 PAJ_RS16770 PAJ_3024 PAJ_RS16770 3618827 3619399 - hypothetical protein membrane protein YebN gene gene3353 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16770 PAJ_RS16775 PAJ_RS16775 PAJ_RS16775 3619705 3619947 + membrane protein gene gene3354 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16775 PAJ_RS16780 PAJ_3025 PAJ_RS16780 3620570 3622183 + malate:quinone oxidoreductase gene gene3355 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16780 PAJ_RS16785 PAJ_3026 PAJ_RS16785 3622292 3622879 - membrane protein gene gene3356 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16785 PAJ_RS16790 PAJ_3027 PAJ_RS16790 3623014 3624504 + GntR family transcriptional regulator gene gene3357 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16790 PAJ_RS16795 PAJ_3028 PAJ_RS16795 3624471 3625094 - glutathione S-transferase gene gene3358 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16795 PAJ_RS16800 PAJ_3029 PAJ_RS16800 3625200 3626048 + hypothetical protein gene gene3359 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16800 PAJ_RS16805 PAJ_3030 PAJ_RS16805 3626088 3626846 - short-chain dehydrogenase gene gene3360 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16805 PAJ_RS16810 PAJ_3031 PAJ_RS16810 3626962 3627861 + LysR family transcriptional regulator gene gene3361 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16810 PAJ_RS16815 PAJ_3032 PAJ_RS16815 3627906 3628919 + inner membrane protein YhjD gene gene3362 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16815 PAJ_RS16820 PAJ_3033 PAJ_RS16820 3629197 3630528 + transporter gene gene3363 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16820 PAJ_RS16825 PAJ_3034 PAJ_RS16825 3630593 3631504 - LtrA gene gene3364 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16825 PAJ_RS16830 PAJ_3035 PAJ_RS16830 3631623 3632594 + general L-amino acid-binding periplasmic protein AapJ gene gene3365 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16830 PAJ_RS16835 PAJ_3036 PAJ_RS16835 3632624 3633514 + hypothetical protein gene gene3366 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16835 PAJ_RS16840 PAJ_3037 PAJ_RS16840 3633562 3634305 + hypothetical protein gene gene3367 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16840 PAJ_RS16845 PAJ_3038 PAJ_RS16845 3634293 3635027 + SDR family oxidoreductase gene gene3368 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16845 PAJ_RS16850 PAJ_3039 PAJ_RS16850 3635076 3636332 + hypothetical protein gene gene3369 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16850 PAJ_RS16855 PAJ_3040 PAJ_RS16855 3636379 3637620 + SetB gene gene3370 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16855 PAJ_RS16860 PAJ_3041 PAJ_RS16860 3637739 3639214 - ketol-acid reductoisomerase catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis gene gene3371 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16860 PAJ_RS16865 PAJ_3042 PAJ_RS16865 3639376 3640257 + transcriptional regulator IlvY participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate gene gene3372 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16865 PAJ_RS16870 PAJ_3043 PAJ_RS16870 3640258 3641805 - PLP-dependent threonine dehydratase threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway gene gene3373 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16870 PAJ_RS16875 PAJ_3044 PAJ_RS16875 3641807 3643657 - dihydroxy-acid dehydratase catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis gene gene3374 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16875 PAJ_RS16880 PAJ_3045 PAJ_RS16880 3643717 3644646 - branched chain amino acid aminotransferase gene gene3375 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16880 PAJ_RS16885 PAJ_3046 ilvM ilvM 3644665 3644922 - acetolactate synthase gene gene3376 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16885 PAJ_RS16890 PAJ_3047 PAJ_RS16890 3644919 3646565 - acetolactate synthase 2 catalytic subunit catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit gene gene3377 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16890 PAJ_RS16895 PAJ_3048 PAJ_RS16895 3647145 3648665 + ATPase among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function gene gene3378 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16895 PAJ_RS16900 PAJ_3049 PAJ_RS16900 3648689 3649027 - hypothetical protein gene gene3379 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16900 PAJ_RS16905 PAJ_3050 PAJ_RS16905 3649149 3649973 + transcriptional regulator HdfR Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon gene gene3380 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16905 PAJ_RS16910 PAJ_t0055 PAJ_RS16910 3650086 3650161 - tRNA-Trp tRNA gene3381 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16910 PAJ_RS16915 PAJ_t0056 PAJ_RS16915 3650170 3650246 - tRNA-Asp tRNA gene3382 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16915 PAJ_RS16920 PAJ_r0011 rrf rrf 3650482 3650597 - 5S ribosomal RNA rRNA gene3383 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16920 PAJ_RS16925 PAJ_r0012 PAJ_RS16925 3650807 3653741 - 23S ribosomal RNA rRNA gene3384 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16925 PAJ_RS16930 PAJ_t0057 PAJ_RS16930 3653938 3654013 - tRNA-Ala tRNA gene3385 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16930 PAJ_RS16935 PAJ_t0058 PAJ_RS16935 3654156 3654232 - tRNA-Ile tRNA gene3386 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16935 PAJ_RS16940 PAJ_r0013 PAJ_RS16940 3654300 3655847 - 16S ribosomal RNA rRNA gene3387 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16940 PAJ_RS16945 PAJ_RS16945 PAJ_RS16945 3656075 3656278 - hypothetical protein gene gene3388 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16945 PAJ_RS16950 PAJ_3051 PAJ_RS16950 3656244 3657097 - glutamate racemase converts L-glutamate to D-glutamate%2C a component of peptidoglycan%3B frameshifted gene gene3389 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16950 PAJ_RS16955 PAJ_3052 btuB btuB 3657042 3658898 - vitamin B12/cobalamin outer membrane transporter involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space gene gene3390 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16955 PAJ_RS16960 PAJ_3053 PAJ_RS16960 3659269 3660372 + tRNA (uridine(54)-C5)-methyltransferase TrmA catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs gene gene3391 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16960 PAJ_RS16965 PAJ_3054 PAJ_RS16965 3660412 3660765 - membrane protein gene gene3392 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16965 PAJ_RS16970 PAJ_3055 PAJ_RS16970 3660780 3661427 - DNA-binding transcriptional regulator FabR negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis gene gene3393 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16970 PAJ_RS16975 PAJ_3056 PAJ_RS16975 3661621 3663021 + NAD(P)(+) transhydrogenase catalyzes the conversion of NADPH to NADH gene gene3394 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16975 PAJ_RS16980 PAJ_3057 PAJ_RS16980 3663004 3663921 - DNA-binding transcriptional regulator OxyR Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA gene gene3395 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16980 PAJ_RS16985 PAJ_3058 PAJ_RS16985 3664278 3665651 - argininosuccinate lyase catalyzes the formation of arginine from (N-L-arginino)succinate gene gene3396 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16985 PAJ_RS16990 PAJ_3059 PAJ_RS16990 3665740 3666957 - argininosuccinate synthase gene gene3397 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16990 PAJ_RS16995 PAJ_3060 PAJ_RS16995 3666982 3667758 - acetylglutamate kinase gene gene3398 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS16995 PAJ_RS17000 PAJ_3061 PAJ_RS17000 3667773 3668777 - N-acetyl-gamma-glutamyl-phosphate reductase gene gene3399 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17000 PAJ_RS17005 PAJ_3062 PAJ_RS17005 3668946 3670094 + acetylornithine deacetylase catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis gene gene3400 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17005 PAJ_RS17010 PAJ_3063 PAJ_RS17010 3670445 3673093 + phosphoenolpyruvate carboxylase catalyzes the formation of oxaloacetate from phosphoenolpyruvate gene gene3401 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17010 PAJ_RS17015 PAJ_3064 PAJ_RS17015 3673456 3675090 + methyl-accepting chemotaxis protein I Tsr gene gene3402 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17015 PAJ_RS17020 PAJ_3065 metF metF 3675184 3676080 - 5%2C10-methylenetetrahydrofolate reductase MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor gene gene3403 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17020 PAJ_RS17025 PAJ_3066 metL metL 3676288 3678723 - bifunctional aspartokinase II/homoserine dehydrogenase II multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways gene gene3404 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17025 PAJ_RS17030 PAJ_3067 PAJ_RS17030 3678726 3679886 - cystathionine gamma-synthase catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine gene gene3405 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17030 PAJ_RS17035 PAJ_3068 PAJ_RS17035 3680158 3680475 + transcriptional regulator when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis gene gene3406 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17035 PAJ_RS17040 PAJ_3069 rpmE rpmE 3680548 3680763 - 50S ribosomal protein L31 RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome gene gene3407 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17040 PAJ_RS17045 PAJ_3070 PAJ_RS17045 3680989 3683184 + primosomal protein N' binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity gene gene3408 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17045 PAJ_RS17050 PAJ_3071 PAJ_RS17050 3683349 3684386 + DNA-binding transcriptional regulator CytR gene gene3409 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17050 PAJ_RS17055 PAJ_3072 PAJ_RS17055 3684540 3685484 + cell division protein FtsN gene gene3410 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17055 PAJ_RS17060 PAJ_3073 PAJ_RS17060 3685612 3686103 + ATP-dependent protease subunit HslV gene gene3411 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17060 PAJ_RS17065 PAJ_3074 hslU hslU 3686114 3687451 + ATP-dependent protease ATP-binding subunit HslU heat shock protein involved in degradation of misfolded proteins gene gene3412 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17065 PAJ_RS17070 PAJ_3075 PAJ_RS17070 3687613 3688098 + ribonuclease E activity regulator RraA regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity gene gene3413 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17070 PAJ_RS17075 PAJ_3076 PAJ_RS17075 3688152 3688391 - septal ring assembly protein ZapB interacts with FisZ and is necessary for Z-ring formation gene gene3414 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17075 PAJ_RS17080 PAJ_3077 PAJ_RS17080 3688809 3689657 + aquaporin involved in the transport of glycerol into the cell gene gene3415 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17080 PAJ_RS17085 PAJ_3078 glpK glpK 3689688 3691199 + glycerol kinase Converts glycerol and ADP to glycerol-3-phosphate and ADP gene gene3416 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17085 PAJ_RS17090 PAJ_3079 PAJ_RS17090 3691294 3692304 + fructose-1%2C6-bisphosphatase%2C class II gene gene3417 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17090 PAJ_RS17095 PAJ_3080 emrD emrD 3692294 3693487 - multidrug resistance protein D multidrug efflux protein involved in adaptation to low energy shock gene gene3418 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17095 PAJ_RS17100 PAJ_3081 PAJ_RS17100 3693759 3694505 + ferredoxin--NADP(+) reductase gene gene3419 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17100 PAJ_RS17105 PAJ_3082 PAJ_RS17105 3694496 3694930 - membrane protein gene gene3420 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17105 PAJ_RS17110 PAJ_3083 PAJ_RS17110 3695028 3695618 + hypothetical protein gene gene3421 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17110 PAJ_RS17115 PAJ_3084 PAJ_RS17115 3695739 3696506 + triose-phosphate isomerase Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate gene gene3422 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17115 PAJ_RS17120 PAJ_3085 PAJ_RS17120 3696538 3697311 - CDP-diacylglycerol diphosphatase gene gene3423 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17120 PAJ_RS17125 PAJ_3086 PAJ_RS17125 3697420 3698409 - sulfate transporter subunit gene gene3424 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17125 PAJ_RS17130 PAJ_3087 PAJ_RS17130 3698556 3699518 - ATP-dependent 6-phosphofructokinase catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis gene gene3425 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17130 PAJ_RS17135 PAJ_3088 fieF fieF 3699725 3700627 - cation-efflux pump FieF member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers gene gene3426 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17135 PAJ_RS17140 PAJ_3089 PAJ_RS17140 3700863 3701027 - stress-induced protein gene gene3427 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17140 PAJ_RS17145 PAJ_3090 cpxP cpxP 3701855 3702364 - repressor CpxP repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates gene gene3428 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17145 PAJ_RS17150 PAJ_3091 PAJ_RS17150 3702513 3703211 + DNA-binding response regulator response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system gene gene3429 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17150 PAJ_RS17155 PAJ_3092 cpxA cpxA 3703208 3704587 + two-component sensor histidine kinase part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors gene gene3430 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17155 PAJ_RS17160 PAJ_3093 PAJ_RS17160 3704623 3705096 + tRNA (cytosine(34)-2'-O)-methyltransferase TrmL member of the SPOUT superfamily of RNA methyltransferases gene gene3431 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17160 PAJ_RS17165 PAJ_3094 cysE cysE 3705093 3705914 - serine O-acetyltransferase catalyzes the O-acetylation of serine gene gene3432 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17165 PAJ_RS17170 PAJ_3095 PAJ_RS17170 3705981 3707000 - glycerol-3-phosphate dehydrogenase gene gene3433 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17170 PAJ_RS17175 PAJ_3096 PAJ_RS17175 3706997 3707467 - protein-export chaperone SecB molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA gene gene3434 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17175 PAJ_RS17180 PAJ_3098 PAJ_RS17180 3707504 3707758 - glutaredoxin 3 gene gene3435 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17180 PAJ_RS17185 PAJ_3099 PAJ_RS17185 3707775 3708206 - rhodanese-like domain-containing protein gene gene3436 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17185 PAJ_RS17190 PAJ_3100 PAJ_RS17190 3708459 3709760 + murein hydrolase activator EnvC gene gene3437 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17190 PAJ_RS17195 PAJ_3101 PAJ_RS17195 3709761 3710672 + hypothetical protein gene gene3438 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17195 PAJ_RS17200 PAJ_3102 tdh tdh 3710759 3711793 - L-threonine 3-dehydrogenase converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism gene gene3439 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17200 PAJ_RS17205 PAJ_3103 PAJ_RS17205 3711803 3712999 - glycine C-acetyltransferase catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine gene gene3440 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17205 PAJ_RS17210 PAJ_3104 rfaD rfaD 3713228 3714160 + ADP-glyceromanno-heptose 6-epimerase catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose gene gene3441 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17210 PAJ_RS17215 PAJ_3105 PAJ_RS17215 3714178 3715236 + ADP-heptose--LPS heptosyltransferase catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core gene gene3442 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17215 PAJ_RS17220 PAJ_3106 PAJ_RS17220 3715224 3716192 + ADP-heptose--LPS heptosyltransferase gene gene3443 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17220 PAJ_RS17225 PAJ_3107 PAJ_RS17225 3716189 3717358 + glycosyltransferase WcaL gene gene3444 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17225 PAJ_RS17230 PAJ_3108 PAJ_RS17230 3717355 3718611 + ligase gene gene3445 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17230 PAJ_RS17235 PAJ_3109 PAJ_RS17235 3718611 3719600 + glycosyl transferase gene gene3446 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17235 PAJ_RS17240 PAJ_3110 PAJ_RS17240 3719563 3720570 - deacetylase gene gene3447 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17240 PAJ_RS17245 PAJ_3111 PAJ_RS17245 3720897 3721994 + glycosyl transferase gene gene3448 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17245 PAJ_RS17250 PAJ_3112 PAJ_RS17250 3722154 3723176 - glycosyl transferase gene gene3449 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17250 PAJ_RS17255 PAJ_3113 PAJ_RS17255 3723391 3724341 + glycosyltransferase gene gene3450 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17255 PAJ_RS17260 PAJ_3114 PAJ_RS17260 3724415 3725491 + putative lipopolysaccharide heptosyltransferase III gene gene3451 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17260 PAJ_RS17265 PAJ_3115 PAJ_RS17265 3725484 3726620 + glycosyl transferase family 1 gene gene3452 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17265 PAJ_RS17270 PAJ_3116 PAJ_RS17270 3726711 3727985 + 3-deoxy-D-manno-octulosonic acid transferase catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A gene gene3453 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17270 PAJ_RS17275 PAJ_3117 PAJ_RS17275 3727985 3728764 + LPS biosynthesis protein gene gene3454 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17275 PAJ_RS17280 PAJ_3118 coaD coaD 3728761 3729240 + pantetheine-phosphate adenylyltransferase Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA gene gene3455 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17280 PAJ_RS17285 PAJ_3119 PAJ_RS17285 3729237 3730046 - DNA-formamidopyrimidine glycosylase Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases gene gene3456 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17285 PAJ_RS17290 PAJ_3120 rpmG rpmG 3730116 3730283 - 50S ribosomal protein L33 in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif gene gene3457 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17290 PAJ_RS17295 PAJ_3121 rpmB rpmB 3730304 3730540 - 50S ribosomal protein L28 required for 70S ribosome assembly gene gene3458 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17295 PAJ_RS17300 PAJ_3122 PAJ_RS17300 3730779 3731435 - hypothetical protein gene gene3459 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17300 PAJ_RS17305 PAJ_3123 PAJ_RS17305 3731616 3732836 + phosphopantothenoylcysteine decarboxylase catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine gene gene3460 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17305 PAJ_RS17310 PAJ_3124 PAJ_RS17310 3732814 3733272 + deoxyuridine 5'-triphosphate nucleotidohydrolase catalyzes the formation of dUMP from dUTP gene gene3461 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17310 PAJ_RS17315 PAJ_3125 slmA slmA 3733393 3733989 + nucleoid occlusion factor SlmA FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly gene gene3462 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17315 PAJ_RS17320 PAJ_3126 pyrE pyrE 3734018 3734659 - orotate phosphoribosyltransferase involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate gene gene3463 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17320 PAJ_RS17325 PAJ_3127 rph rph 3734708 3735424 - ribonuclease PH RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs gene gene3464 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17325 PAJ_RS17330 PAJ_3128 PAJ_RS17330 3735578 3736762 + nucleoside transporter gene gene3465 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17330 PAJ_RS17335 PAJ_3129 PAJ_RS17335 3736798 3737232 - hypothetical protein gene gene3466 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17335 PAJ_RS17340 PAJ_3130 PAJ_RS17340 3737390 3738253 + hypothetical protein gene gene3467 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17340 PAJ_RS17345 PAJ_3131 PAJ_RS17345 3738398 3738916 + hypothetical protein incomplete%3B partial in the middle of a contig%3B missing start gene gene3468 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17345 PAJ_RS17350 PAJ_3132 PAJ_RS17350 3739646 3740620 + serine/threonine phosphatase gene gene3469 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17350 PAJ_RS17355 PAJ_3133 PAJ_RS17355 3740613 3741680 + hypothetical protein gene gene3470 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17355 PAJ_RS17360 PAJ_3134 PAJ_RS17360 3741680 3742735 + protein kinase gene gene3471 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17360 PAJ_RS17365 PAJ_RS17365 PAJ_RS17365 3743903 3744178 + hypothetical protein gene gene3472 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17365 PAJ_RS17370 PAJ_3135 PAJ_RS17370 3744696 3745619 + lipid A biosynthesis palmitoleoyl acyltransferase Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock gene gene3473 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17370 PAJ_RS17375 PAJ_3136 PAJ_RS17375 3746381 3747043 + LPS biosynthesis protein gene gene3474 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17375 PAJ_RS17380 PAJ_3137 PAJ_RS17380 3747500 3748117 + membrane protein gene gene3475 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17380 PAJ_RS17385 PAJ_3138 ligB ligB 3748031 3749800 - DNA ligase B this ligase is similar to LigA but it lacks the C-terminal BRCT domain%3B catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+ gene gene3476 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17385 PAJ_RS17390 PAJ_3139 gmk gmk 3750041 3750664 + guanylate kinase Essential for recycling GMP and indirectly%2C cGMP gene gene3477 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17390 PAJ_RS17395 PAJ_3140 rpoZ rpoZ 3750719 3750994 + DNA-directed RNA polymerase subunit omega Promotes RNA polymerase assembly%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits gene gene3478 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17395 PAJ_RS17400 PAJ_3141 PAJ_RS17400 3751015 3753123 + bifunctional (p)ppGpp synthetase II/ guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase gene gene3479 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17400 PAJ_RS17405 PAJ_3143 PAJ_RS17405 3753127 3753828 + tRNA (guanosine(18)-2'-O)-methyltransferase TrmH specifically modifies tRNA at position G18 gene gene3480 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17405 PAJ_RS17410 PAJ_3144 PAJ_RS17410 3753825 3755903 + ATP-dependent DNA helicase RecG catalyzes branch migration in Holliday junction intermediates gene gene3481 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17410 PAJ_RS17415 PAJ_3145 PAJ_RS17415 3755988 3757367 + xanthine permease high-affinity transporter for xanthine gene gene3482 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17415 PAJ_RS17420 PAJ_3146 PAJ_RS17420 3757479 3759158 + hypothetical protein gene gene3483 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17420 PAJ_RS17425 PAJ_3147 PAJ_RS17425 3759191 3760138 - GNAT family N-acetyltransferase gene gene3484 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17425 PAJ_RS17430 PAJ_3148 PAJ_RS17430 3760198 3760635 - D-tyrosyl-tRNA(Tyr) deacylase hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine gene gene3485 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17430 PAJ_RS17435 PAJ_3149 PAJ_RS17435 3760632 3761501 - membrane protein gene gene3486 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17435 PAJ_RS17440 PAJ_3150 PAJ_RS17440 3761505 3762101 - glucose-1-phosphatase gene gene3487 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17440 PAJ_RS17445 PAJ_3151 PAJ_RS17445 3762326 3764149 - GTP-binding protein gene gene3488 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17445 PAJ_RS17450 PAJ_3152 glnA glnA 3764582 3765991 + glutamine synthetase forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme gene gene3489 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17450 PAJ_RS17455 PAJ_3153 glnL glnL 3766185 3767234 + two-component system sensor histidine kinase NtrB sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation gene gene3490 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17455 PAJ_RS17460 PAJ_3154 glnG glnG 3767242 3768651 + nitrogen regulation protein NR(I) response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54 gene gene3491 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17460 PAJ_RS17465 PAJ_3155 PAJ_RS17465 3768692 3770065 - oxygen-independent coproporphyrinogen III oxidase catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III gene gene3492 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17465 PAJ_RS17470 PAJ_3156 PAJ_RS17470 3770300 3770821 - GTPase-activating protein gene gene3493 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17470 PAJ_RS17475 PAJ_3157 PAJ_RS17475 3771371 3772006 + YihA family ribosome biogenesis GTP-binding protein gene gene3494 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17475 PAJ_RS17480 PAJ_3158 PAJ_RS17480 3772402 3775188 - DNA polymerase I has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair gene gene3495 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17480 PAJ_RS17485 PAJ_3159 PAJ_RS17485 3775569 3776198 - DSBA oxidoreductase gene gene3496 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17485 PAJ_RS17490 PAJ_3160 PAJ_RS17490 3776224 3777210 - stress response kinase A catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages gene gene3497 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17490 PAJ_RS17495 PAJ_3161 PAJ_RS17495 3777256 3777531 - hypothetical protein gene gene3498 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17495 PAJ_RS17500 PAJ_3162 mobA mobA 3777584 3778156 + molybdenum cofactor guanylyltransferase in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis gene gene3499 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17500 PAJ_RS17505 PAJ_3163 PAJ_RS17505 3778156 3778671 + molybdopterin-guanine dinucleotide biosynthesis protein MobB in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway gene gene3500 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17505 PAJ_RS17510 PAJ_r0014 rrf rrf 3778984 3779099 - 5S ribosomal RNA rRNA gene3501 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17510 PAJ_RS17515 PAJ_r0015 PAJ_RS17515 3779308 3782242 - 23S ribosomal RNA rRNA gene3502 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17515 PAJ_RS17520 PAJ_t0059 PAJ_RS17520 3782475 3782549 - tRNA-Glu tRNA gene3503 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17520 PAJ_RS17525 PAJ_r0016 PAJ_RS17525 3782634 3784185 - 16S ribosomal RNA rRNA gene3504 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17525 PAJ_RS17530 PAJ_3165 PAJ_RS17530 3784720 3786120 + MFS transporter gene gene3505 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17530 PAJ_RS17535 PAJ_3166 PAJ_RS17535 3786117 3787100 - transcriptional regulator RbsR binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers gene gene3506 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17535 PAJ_RS17540 PAJ_3167 PAJ_RS17540 3787114 3788043 - ribokinase catalyzes the formation of D-ribose 5-phosphate from ribose gene gene3507 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17540 PAJ_RS17545 PAJ_3168 PAJ_RS17545 3788105 3788980 - D-ribose ABC transporter substrate-binding protein periplasmic substrate-binding component of the ATP-dependent ribose transport system gene gene3508 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17545 PAJ_RS17550 PAJ_3169 rbsC rbsC 3789007 3789978 - ribose ABC transporter permease functions to transport ribose at high affinity%3B forms a complex with RbsA2C2B gene gene3509 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17550 PAJ_RS17555 PAJ_3170 PAJ_RS17555 3789975 3791483 - ribose ABC transporter ATP-binding protein RbsA gene gene3510 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17555 PAJ_RS17560 PAJ_3172 PAJ_RS17560 3791491 3791910 - D-ribose pyranase cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source gene gene3511 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17560 PAJ_RS17565 PAJ_3173 PAJ_RS17565 3792093 3792494 - TIGR00156 family protein gene gene3512 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17565 PAJ_RS17570 PAJ_3174 PAJ_RS17570 3792655 3793326 + DNA-binding response regulator response regulator in two-component regulatory system with QseC%3B regulates FlhCD which is the master regulator for flagella and motility genes gene gene3513 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17570 PAJ_RS17575 PAJ_3175 PAJ_RS17575 3793323 3794654 + two-component sensor histidine kinase gene gene3514 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17575 PAJ_RS17580 PAJ_3176 trkD trkD 3794686 3796554 - potassium transporter Kup Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH gene gene3515 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17580 PAJ_RS17585 PAJ_3177 PAJ_RS17585 3796825 3798321 + ATPase RavA interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase gene gene3516 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17585 PAJ_RS17590 PAJ_3178 PAJ_RS17590 3798318 3799778 + protoheme IX farnesyltransferase contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA gene gene3517 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17590 PAJ_RS17595 PAJ_3179 PAJ_RS17595 3799904 3801991 + SAM-dependent methyltransferase gene gene3518 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17595 PAJ_RS17600 PAJ_3180 PAJ_RS17600 3802096 3802557 + transcriptional regulator AsnC transcriptional repressor of asnA which codes for aspartate-ammonia ligase gene gene3519 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17600 PAJ_RS17605 PAJ_3181 PAJ_RS17605 3802713 3803153 + FMN-binding protein MioC An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene3520 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17605 PAJ_RS17610 PAJ_3182 gidA gidA 3803586 3805475 + tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs gene gene3521 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17610 PAJ_RS17615 PAJ_3183 gidB gidB 3805523 3806149 + 16S rRNA methyltransferase G glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA gene gene3522 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17615 PAJ_RS17620 PAJ_3184 PAJ_RS17620 3806838 3807218 + F0F1 ATP synthase subunit I Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation gene gene3523 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17620 PAJ_RS17625 PAJ_3185 PAJ_RS17625 3807227 3808045 + F0F1 ATP synthase subunit A Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 gene gene3524 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17625 PAJ_RS17630 PAJ_3186 PAJ_RS17630 3808094 3808333 + ATP synthase subunit C Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 gene gene3525 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17630 PAJ_RS17635 PAJ_3187 PAJ_RS17635 3808437 3808907 + F0F1 ATP synthase subunit B Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. gene gene3526 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17635 PAJ_RS17640 PAJ_3188 PAJ_RS17640 3808922 3809455 + F0F1 ATP synthase subunit delta Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex gene gene3527 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17640 PAJ_RS17645 PAJ_3189 PAJ_RS17645 3809470 3811011 + ATP synthase subunit alpha produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit gene gene3528 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17645 PAJ_RS17650 PAJ_3191 PAJ_RS17650 3811064 3811930 + F0F1 ATP synthase subunit gamma Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit gene gene3529 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17650 PAJ_RS17655 PAJ_3192 PAJ_RS17655 3811961 3813358 + ATP synthase subunit beta gene gene3530 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17655 PAJ_RS17660 PAJ_3193 atpC atpC 3813383 3813802 + F0F1 ATP synthase subunit epsilon part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane gene gene3531 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17660 PAJ_RS17665 PAJ_3194 glmU glmU 3813964 3815334 + bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis gene gene3532 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17665 PAJ_RS17670 PAJ_3195 PAJ_RS17670 3815478 3817307 + glutamine--fructose-6-phosphate aminotransferase Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source gene gene3533 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17670 PAJ_RS17675 PAJ_RS17675 PAJ_RS17675 3817351 3817734 - hypothetical protein gene gene3534 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17675 PAJ_RS17680 PAJ_3196 PAJ_RS17680 3817911 3818954 + phosphate ABC transporter substrate-binding protein gene gene3535 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17680 PAJ_RS17685 PAJ_3197 pstC pstC 3819041 3820003 + phosphate transporter permease subunit PstC part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions gene gene3536 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17685 PAJ_RS17690 PAJ_3198 pstA pstA 3820000 3820890 + phosphate transporter permease subunit PtsA Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions gene gene3537 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17690 PAJ_RS17695 PAJ_3199 PAJ_RS17695 3820935 3821642 + phosphate ABC transporter ATP-binding protein gene gene3538 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17695 PAJ_RS17700 PAJ_3200 PAJ_RS17700 3821660 3822394 + transcriptional regulator regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon gene gene3539 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17700 PAJ_RS17705 PAJ_3201 PAJ_RS17705 3822506 3823744 + MFS transporter gene gene3540 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17705 PAJ_RS17710 PAJ_3202 PAJ_RS17710 3824037 3825479 - xylulokinase catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose gene gene3541 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17710 PAJ_RS17715 PAJ_3203 PAJ_RS17715 3825497 3826819 - xylose isomerase catalyzes the interconversion of D-xylose to D-xylulose gene gene3542 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17715 PAJ_RS17720 PAJ_3204 xylF xylF 3827174 3828166 + xylose ABC transporter substrate-binding protein periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity gene gene3543 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17720 PAJ_RS17725 PAJ_3205 PAJ_RS17725 3828193 3829713 + xylose ABC transporter ATP-binding protein with XylFH is part of the high affinity xylose ABC transporter gene gene3544 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17725 PAJ_RS17730 PAJ_3206 PAJ_RS17730 3829706 3830887 + xylose ABC transporter permease gene gene3545 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17730 PAJ_RS17735 PAJ_3207 PAJ_RS17735 3830980 3832155 + XylR family transcriptional regulator gene gene3546 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17735 PAJ_RS17740 PAJ_3208 PAJ_RS17740 3832542 3832979 + GNAT family acetyltransferase gene gene3547 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17740 PAJ_RS17745 PAJ_3209 PAJ_RS17745 3833301 3834398 + DUF4432 domain-containing protein gene gene3548 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17745 PAJ_RS17750 PAJ_3210 PAJ_RS17750 3834712 3835722 + LacI family transcriptional regulator gene gene3549 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17750 PAJ_RS17755 PAJ_3211 PAJ_RS17755 3835806 3837290 + lipase gene gene3550 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17755 PAJ_RS17760 PAJ_RS17760 PAJ_RS17760 3837283 3838284 + sugar ABC transporter permease gene gene3551 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17760 PAJ_RS17765 PAJ_3212 PAJ_RS17765 3838281 3839324 + ABC transporter permease gene gene3552 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17765 PAJ_RS17770 PAJ_3213 PAJ_RS17770 3839393 3840292 + RpiR family transcriptional regulator gene gene3553 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17770 PAJ_RS17775 PAJ_3214 PAJ_RS17775 3840321 3840782 + peroxiredoxin gene gene3554 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17775 PAJ_RS17780 PAJ_3215 PAJ_RS17780 3840922 3842091 - hypothetical protein gene gene3555 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17780 PAJ_RS17785 PAJ_3216 PAJ_RS17785 3842136 3843122 - hypothetical protein gene gene3556 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17785 PAJ_RS17790 PAJ_RS17790 PAJ_RS17790 3843765 3843953 + putative motility protein gene gene3557 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17790 PAJ_RS17795 PAJ_RS17795 PAJ_RS17795 3844290 3844505 + hypothetical protein gene gene3558 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17795 PAJ_RS17800 PAJ_3217 PAJ_RS17800 3844813 3846135 + pili assembly chaperone gene gene3559 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17800 PAJ_RS17805 PAJ_3218 PAJ_RS17805 3846302 3847201 + LysR family transcriptional regulator gene gene3560 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17805 PAJ_RS17810 PAJ_3219 PAJ_RS17810 3847176 3847982 - molybdenum ABC transporter substrate-binding protein gene gene3561 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17810 PAJ_RS17815 PAJ_3220 PAJ_RS17815 3847998 3849299 - MFS transporter is involved in the uptake of citrate and the transport of protons into the cell gene gene3562 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17815 PAJ_RS17820 PAJ_3221 PAJ_RS17820 3849808 3851187 - maltoporin gene gene3563 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17820 PAJ_RS17825 PAJ_3222 PAJ_RS17825 3851371 3851673 - molecular chaperone TorD gene gene3564 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17825 PAJ_RS17830 PAJ_3223 PAJ_RS17830 3851684 3853066 - 6-phospho-beta-glucosidase gene gene3565 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17830 PAJ_RS17835 PAJ_3224 PAJ_RS17835 3853079 3854416 - PTS cellobiose transporter subunit IIC gene gene3566 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17835 PAJ_RS17840 PAJ_3225 PAJ_RS17840 3854429 3854743 - PTS sugar transporter subunit IIB gene gene3567 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17840 PAJ_RS17845 PAJ_3226 PAJ_RS17845 3855034 3855990 + LacI family transcriptional regulator gene gene3568 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17845 PAJ_RS17850 PAJ_3227 PAJ_RS17850 3855997 3857130 - XylR gene gene3569 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17850 PAJ_RS17855 PAJ_3228 PAJ_RS17855 3857346 3858086 - DNA replication protein DnaC acts to load the DnaB helicase onto the initiation site during DNA replication gene gene3570 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17855 PAJ_RS17860 PAJ_3229 PAJ_RS17860 3858086 3858622 - primosomal protein DnaI This protein is required for primosome-dependent normal DNA replication%3B it is also involved in inducing stable DNA replication during SOS response. It forms%2C in concert with dnaB protein and other prepriming proteins dnaC%2C N%2C N'%2C N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N' gene gene3571 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17860 PAJ_RS17865 PAJ_3230 PAJ_RS17865 3858795 3859400 - hypothetical protein gene gene3572 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17865 PAJ_RS17870 PAJ_3231 PAJ_RS17870 3859611 3860171 + DNA-3-methyladenine glycosidase gene gene3573 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17870 PAJ_RS17875 PAJ_3232 PAJ_RS17875 3860287 3860949 + membrane protein gene gene3574 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17875 PAJ_RS17880 PAJ_3233 PAJ_RS17880 3861110 3862093 + transcriptional regulator gene gene3575 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17880 PAJ_RS17885 PAJ_3234 PAJ_RS17885 3862162 3863187 + LacI family transcriptional regulator gene gene3576 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17885 PAJ_RS17890 PAJ_3235 PAJ_RS17890 3863325 3864074 + hypothetical protein gene gene3577 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17890 PAJ_RS17895 PAJ_3236 PAJ_RS17895 3864084 3865037 + 2-dehydro-3-deoxygluconokinase gene gene3578 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17895 PAJ_RS17900 PAJ_3237 PAJ_RS17900 3865071 3866351 + MFS transporter gene gene3579 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17900 PAJ_RS17905 PAJ_3238 PAJ_RS17905 3866423 3867397 + D-glycerate dehydrogenase catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate gene gene3580 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17905 PAJ_RS17910 PAJ_RS17910 avtA avtA 3867479 3868730 + valine--pyruvate aminotransferase transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis%3B frameshifted gene gene3581 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17910 PAJ_RS17915 PAJ_3240 PAJ_RS17915 3868898 3869809 + O-acetylserine/cysteine export protein gene gene3582 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17915 PAJ_RS17920 PAJ_3241 PAJ_RS17920 3869867 3870805 - 2-pyrone-4%2C6-dicarboxylate hydrolase gene gene3583 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17920 PAJ_RS17925 PAJ_3242 PAJ_RS17925 3871334 3872251 + transposase gene gene3584 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17925 PAJ_RS17930 PAJ_3243 PAJ_RS17930 3872438 3872854 - heat-shock protein IbpA with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress gene gene3585 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17930 PAJ_RS17935 PAJ_3244 PAJ_RS17935 3873137 3873499 + hypothetical protein gene gene3586 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17935 PAJ_RS17940 PAJ_3245 PAJ_RS17940 3873480 3874733 - biopolymer transporter Tol gene gene3587 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17940 PAJ_RS17945 PAJ_3247 PAJ_RS17945 3874843 3875652 - sugar-phosphatase YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate)%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins gene gene3588 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17945 PAJ_RS17950 PAJ_3248 gyrB gyrB 3875844 3878252 - DNA gyrase subunit B negatively supercoils closed circular double-stranded DNA gene gene3589 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17950 PAJ_RS17955 PAJ_3249 recF recF 3878270 3879355 - DNA replication/repair protein RecF Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA gene gene3590 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17955 PAJ_RS17960 PAJ_3250 PAJ_RS17960 3879501 3880601 - DNA polymerase III subunit beta binds the polymerase to DNA and acts as a sliding clamp gene gene3591 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17960 PAJ_RS17965 PAJ_3251 dnaA dnaA 3880606 3882012 - chromosomal replication initiation protein DnaA binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself. gene gene3592 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17965 PAJ_RS17970 PAJ_RS17970 PAJ_RS17970 3882229 3882417 + hypothetical protein gene gene3593 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17970 PAJ_RS17975 PAJ_3253 rnpA rnpA 3882765 3883124 + ribonuclease P protein component protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates gene gene3594 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17975 PAJ_RS17980 PAJ_3254 PAJ_RS17980 3883348 3884994 + membrane protein insertase YidC functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria gene gene3595 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17980 PAJ_RS17985 PAJ_3255 trmE trmE 3885084 3886448 + tRNA modification GTPase in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE gene gene3596 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17985 PAJ_RS17990 PAJ_3256 PAJ_RS17990 3886688 3887278 + nitroreductase family protein gene gene3597 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17990 PAJ_RS17995 PAJ_3257 PAJ_RS17995 3887452 3888195 + hypothetical protein gene gene3598 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS17995 PAJ_RS18000 PAJ_3258 PAJ_RS18000 3888235 3889548 - adenine permease involved in the transport or adenine gene gene3599 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18000 PAJ_RS18005 PAJ_3259 PAJ_RS18005 3889698 3890360 + 6-phosphogluconate phosphatase gene gene3600 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18005 PAJ_RS18010 PAJ_3260 PAJ_RS18010 3890363 3891358 - O-acetyltransferase gene gene3601 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18010 PAJ_RS18015 PAJ_3261 PAJ_RS18015 3891640 3892551 + glycine--tRNA ligase subunit alpha gene gene3602 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18015 PAJ_RS18020 PAJ_3262 glyS glyS 3892561 3894630 + glycine--tRNA ligase subunit beta glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA gene gene3603 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18020 PAJ_RS18025 PAJ_3264 PAJ_RS18025 3894860 3895600 - MltA-interacting protein precursor MipA gene gene3604 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18025 PAJ_RS18030 PAJ_3265 PAJ_RS18030 3896193 3896753 + virulence membrane protein PagC precursor gene gene3605 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18030 PAJ_RS18035 PAJ_3266 PAJ_RS18035 3896875 3897486 - glutathione S-transferase gene gene3606 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18035 PAJ_RS18040 PAJ_3267 PAJ_RS18040 3897523 3898446 - formate dehydrogenase accessory protein FdhE required for the formation of active formate dehydrogenase gene gene3607 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18040 PAJ_RS18045 PAJ_RS18045 PAJ_RS18045 3898439 3898714 + hypothetical protein gene gene3608 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18045 PAJ_RS18050 PAJ_3268 PAJ_RS18050 3898787 3899716 + formate dehydrogenase accessory protein FdhD gene gene3609 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18050 PAJ_RS18055 PAJ_3269 PAJ_RS18055 3899979 3900596 + superoxide dismutase SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals gene gene3610 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18055 PAJ_RS18060 PAJ_3270 PAJ_RS18060 3900941 3901903 + hypothetical protein gene gene3611 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18060 PAJ_RS18065 PAJ_RS18065 PAJ_RS18065 3901911 3902274 - hypothetical protein frameshifted gene gene3612 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18065 PAJ_RS18070 PAJ_3272 mtlR mtlR 3902377 3902910 - mannitol operon repressor Acts as a repressor of the mtlAD operon gene gene3613 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18070 PAJ_RS18075 PAJ_3273 PAJ_RS18075 3902987 3904135 - mannitol-1-phosphate 5-dehydrogenase gene gene3614 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18075 PAJ_RS18080 PAJ_3274 PAJ_RS18080 3904229 3906163 - PTS mannitol transporter subunit IICBA catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIC forms the translocation channel and contains the specific substrate-binding site%3B subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit%3B subunit IIB transfers the phosphoryl group to the substrate gene gene3615 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18080 PAJ_RS18085 PAJ_3275 PAJ_RS18085 3906600 3907316 - hypothetical protein gene gene3616 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18085 PAJ_RS18090 PAJ_RS18090 PAJ_RS18090 3907835 3908104 + hypothetical protein gene gene3617 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18090 PAJ_RS18095 PAJ_3276 PAJ_RS18095 3908334 3908627 + transcriptional regulator gene gene3618 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18095 PAJ_RS18100 PAJ_3277 PAJ_RS18100 3908742 3909989 - tryptophan permease tryptophan transporter of high affinity gene gene3619 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18100 PAJ_RS18105 PAJ_3278 tnaA tnaA 3910102 3911520 - tryptophanase tryptophan indole-lyase%3B catalyzes the formation of indole and pyruvate from tryptophan%3B also has xysteine desulfhydrase activity gene gene3620 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18105 PAJ_RS18110 PAJ_3279 PAJ_RS18110 3912389 3912982 - GTP pyrophosphokinase gene gene3621 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18110 PAJ_RS18115 PAJ_3280 PAJ_RS18115 3913042 3913506 + transcriptional regulator gene gene3622 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18115 PAJ_RS18120 PAJ_RS18120 PAJ_RS18120 3913600 3914028 + hypothetical protein gene gene3623 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18120 PAJ_RS18125 PAJ_3281 PAJ_RS18125 3914289 3915980 + phosphoethanolamine transferase catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide gene gene3624 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18125 PAJ_RS18130 PAJ_t0060 PAJ_RS18130 3916105 3916181 + tRNA-Pro tRNA gene3625 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18130 PAJ_RS18135 PAJ_RS18135 PAJ_RS18135 3916215 3916344 + RtT sRNA rtT sRNA%2C processed from tyrT transcript ncRNA gene3626 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18135 PAJ_RS18140 PAJ_3282 PAJ_RS18140 3917226 3918836 + peptide ABC transporter substrate-binding protein DppABCDF is involved in the transport of dipeptides%3B also binds heme and mediates chemotaxis to dipeptides gene gene3627 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18140 PAJ_RS18145 PAJ_3283 PAJ_RS18145 3919040 3920059 + peptide ABC transporter permease gene gene3628 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18145 PAJ_RS18150 PAJ_3284 PAJ_RS18150 3920069 3920971 + peptide ABC transporter gene gene3629 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18150 PAJ_RS18155 PAJ_3285 dppD dppD 3920984 3921970 + dipeptide ABC transporter ATP-binding protein DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF gene gene3630 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18155 PAJ_RS18160 PAJ_3286 dppF dppF 3921960 3922988 + dipeptide ABC transporter ATP-binding protein Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides gene gene3631 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18160 PAJ_RS18165 PAJ_RS18165 PAJ_RS18165 3923037 3923240 - hypothetical protein gene gene3632 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18165 PAJ_RS18170 PAJ_3287 PAJ_RS18170 3923828 3924415 + cellulose biosynthesis protein BcsO gene gene3633 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18170 PAJ_RS18175 PAJ_3288 PAJ_RS18175 3924406 3925209 + cellulose synthase operon protein YhjQ gene gene3634 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18175 PAJ_RS18180 PAJ_3289 PAJ_RS18180 3925264 3927369 + cellulose synthase catalytic subunit (UDP-forming) gene gene3635 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18180 PAJ_RS18185 PAJ_3290 PAJ_RS18185 3927366 3930173 + cellulose synthase regulator BcsB gene gene3636 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18185 PAJ_RS18190 PAJ_3291 PAJ_RS18190 3930185 3933991 + cellulose synthase operon protein C precursor BscS gene gene3637 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18190 PAJ_RS18195 PAJ_RS18195 PAJ_RS18195 3933991 3934437 + cellulose synthase gene gene3638 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18195 PAJ_RS18200 PAJ_3292 PAJ_RS18200 3934447 3935451 + endoglucanase gene gene3639 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18200 PAJ_RS18205 PAJ_3293 PAJ_RS18205 3935690 3937666 + biofilm formation regulator HmsP HmsP in Yersinia pestis plays a role in invasion of epithelial cells%3B the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation%3B inner membrane protein gene gene3640 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18205 PAJ_RS18210 PAJ_3294 PAJ_RS18210 3937891 3939174 + C4-dicarboxylate transporter DctA involved in the transport of C4-dicarboxylates across the membrane gene gene3641 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18210 PAJ_RS18215 PAJ_RS18215 PAJ_RS18215 3939198 3939419 - hypothetical protein gene gene3642 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18215 PAJ_RS18220 PAJ_3295 PAJ_RS18220 3939420 3940928 + hypothetical protein gene gene3643 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18220 PAJ_RS18225 PAJ_3296 PAJ_RS18225 3940933 3941805 - pectin acetylesterase XynB gene gene3644 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18225 PAJ_RS18230 PAJ_3297 PAJ_RS18230 3942227 3942670 - glyoxalase gene gene3645 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18230 PAJ_RS18235 PAJ_3298 PAJ_RS18235 3942737 3943669 - ketodeoxygluconokinase catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate gene gene3646 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18235 PAJ_RS18240 PAJ_3299 PAJ_RS18240 3943937 3944710 + cyclic-guanylate-specific phosphodiesterase in Escherichia coli this protein is involved in flagellar function gene gene3647 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18240 PAJ_RS18245 PAJ_3300 PAJ_RS18245 3944774 3946831 + hypothetical protein gene gene3648 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18245 PAJ_RS18250 PAJ_3301 PAJ_RS18250 3946832 3947113 - peptidyl-prolyl cis-trans isomerase rotamase C%3B accelerates isomerization of the peptidyl prolyl bond gene gene3649 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18250 PAJ_RS18255 PAJ_3302 PAJ_RS18255 3947261 3949282 + ATP-dependent DNA helicase Rep single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication gene gene3650 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18255 PAJ_RS18260 PAJ_3303 PAJ_RS18260 3949299 3950783 - guanosine-5'-triphosphate%2C3'-diphosphate pyrophosphatase catalyzes the conversion of guanosine 5'-triphosphate%2C3'-diphosphate (pppGpp) to guanosine 5'-diphosphate%2C3'-diphosphate (ppGpp)%3B pppGpp and ppGpp control the stringent response during amino acid starvation gene gene3651 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18260 PAJ_RS18265 PAJ_3304 PAJ_RS18265 3950791 3952083 - ATP-dependent RNA helicase RhlB enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation gene gene3652 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18265 PAJ_RS18270 PAJ_3305 trxA trxA 3952201 3952533 + thiol reductase thioredoxin gene gene3653 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18270 PAJ_RS18275 PAJ_3306 rho rho 3952875 3954134 + transcription termination factor Rho An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes gene gene3654 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18275 PAJ_RS18280 PAJ_3307 PAJ_RS18280 3954413 3955501 + undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate gene gene3655 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18280 PAJ_RS18285 PAJ_3308 PAJ_RS18285 3955525 3956574 + polysaccharide chain length modulation protein Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein gene gene3656 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18285 PAJ_RS18290 PAJ_3309 PAJ_RS18290 3956585 3957715 + UDP-N-acetyl glucosamine 2-epimerase gene gene3657 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18290 PAJ_RS18295 PAJ_3310 wecC wecC 3957712 3958971 + UDP-N-acetyl-D-mannosamine dehydrogenase catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid gene gene3658 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18295 PAJ_RS18300 PAJ_3311 PAJ_RS18300 3958968 3960038 + dTDP-glucose 4%2C6-dehydratase gene gene3659 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18300 PAJ_RS18305 PAJ_3312 PAJ_RS18305 3960057 3960938 + glucose-1-phosphate thymidylyltransferase gene gene3660 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18305 PAJ_RS18310 PAJ_3313 PAJ_RS18310 3960916 3961623 + TDP-fucosamine acetyltransferase gene gene3661 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18310 PAJ_RS18315 PAJ_3314 PAJ_RS18315 3961610 3962740 + dTDP-4-amino-4%2C6-dideoxy-D-glucose transaminase catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis gene gene3662 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18315 PAJ_RS18320 PAJ_3315 PAJ_RS18320 3962740 3963990 + translocase involved in the movement of lipid III across the membrane gene gene3663 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18320 PAJ_RS18325 PAJ_3316 PAJ_RS18325 3963987 3965054 + 4-alpha-L-fucosyltransferase catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis gene gene3664 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18325 PAJ_RS18330 PAJ_3317 PAJ_RS18330 3965051 3966394 + enterobacterial common antigen polymerase enterobacterial common antigen polymerase gene gene3665 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18330 PAJ_RS18335 PAJ_3318 PAJ_RS18335 3966431 3967171 + lipopolysaccharide N-acetylmannosaminouronosyltransferase gene gene3666 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18335 PAJ_RS18340 PAJ_t0061 PAJ_RS18340 3967330 3967406 + tRNA-Arg tRNA gene3667 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18340 PAJ_RS18345 PAJ_t0062 PAJ_RS18345 3967502 3967577 + tRNA-His tRNA gene3668 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18345 PAJ_RS18350 PAJ_t0063 PAJ_RS18350 3967594 3967680 + tRNA-Leu tRNA gene3669 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18350 PAJ_RS18355 PAJ_t0064 PAJ_RS18355 3967702 3967778 + tRNA-Pro tRNA gene3670 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18355 PAJ_RS18360 PAJ_RS18360 PAJ_RS18360 3967811 3967940 + RtT sRNA rtT sRNA%2C processed from tyrT transcript ncRNA gene3671 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18360 PAJ_RS18365 PAJ_3319 PAJ_RS18365 3968626 3969823 - protoheme IX biogenesis protein frameshifted gene gene3672 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18365 PAJ_RS18370 PAJ_3320 PAJ_RS18370 3969826 3970959 - uroporphyrinogen-III C-methyltransferase gene gene3673 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18370 PAJ_RS18375 PAJ_3321 hemD hemD 3970984 3971712 - uroporphyrinogen-III synthase catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis gene gene3674 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18375 PAJ_RS18380 PAJ_3322 hemC hemC 3971709 3972650 - hydroxymethylbilane synthase transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis gene gene3675 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18380 PAJ_RS18385 PAJ_3323 cyaA cyaA 3972964 3975522 + adenylate cyclase catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP gene gene3676 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18385 PAJ_RS18390 PAJ_3325 dapF dapF 3975904 3976728 + diaminopimelate epimerase involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate gene gene3677 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18390 PAJ_RS18395 PAJ_3326 PAJ_RS18395 3976725 3977429 + hypothetical protein gene gene3678 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18395 PAJ_RS18400 PAJ_3327 xerC xerC 3977426 3978331 + tyrosine recombinase XerC site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs gene gene3679 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18400 PAJ_RS18405 PAJ_3328 PAJ_RS18405 3978328 3979044 + flavin mononucleotide phosphatase YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function gene gene3680 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18405 PAJ_RS18410 PAJ_3329 uvrD uvrD 3979099 3981261 + DNA-dependent helicase II unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair. gene gene3681 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18410 PAJ_RS18415 PAJ_3330 PAJ_RS18415 3981553 3982506 + magnesium/nickel/cobalt transporter CorA responsible for the influx of magnesium ions gene gene3682 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18415 PAJ_RS18420 PAJ_3331 PAJ_RS18420 3982604 3983656 + AbrB family transcriptional regulator gene gene3683 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18420 PAJ_RS18425 PAJ_3332 PAJ_RS18425 3983627 3984526 - chloramphenicol resistance permease RarD gene gene3684 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18425 PAJ_RS18430 PAJ_3333 PAJ_RS18430 3984647 3985024 - transcriptional regulator gene gene3685 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18430 PAJ_RS18435 PAJ_3334 PAJ_RS18435 3985259 3985732 + hypothetical protein gene gene3686 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18435 PAJ_RS18440 PAJ_3335 PAJ_RS18440 3985790 3986260 - hypothetical protein gene gene3687 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18440 PAJ_RS18445 PAJ_3336 PAJ_RS18445 3986451 3987327 + phospholipase catalyzes the hydrolysis of phosphatidylcholine%3B frameshifted gene gene3688 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18445 PAJ_RS18450 PAJ_3337 PAJ_RS18450 3987351 3989177 + ATP-dependent DNA helicase RecQ functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway gene gene3689 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18450 PAJ_RS18455 PAJ_3338 PAJ_RS18455 3989190 3989813 + threonine export protein RhtC gene gene3690 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18455 PAJ_RS18460 PAJ_3339 rhtB rhtB 3989890 3990513 - homoserine/homoserine lactone efflux protein gene gene3691 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18460 PAJ_RS18465 PAJ_3340 PAJ_RS18465 3990628 3991620 + lysophospholipase L2 lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates gene gene3692 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18465 PAJ_RS18470 PAJ_3341 PAJ_RS18470 3991675 3992475 + sugar/pyridoxal phosphate phosphatase YigL gene gene3693 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18470 PAJ_RS18475 PAJ_3342 glpT glpT 3992516 3993856 - sn-glycerol-3-phosphate transporter catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell gene gene3694 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18475 PAJ_RS18480 PAJ_3343 PAJ_RS18480 3994208 3995068 + membrane protein gene gene3695 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18480 PAJ_RS18485 PAJ_3344 PAJ_RS18485 3995214 3995693 - hypothetical protein gene gene3696 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18485 PAJ_RS18490 PAJ_3345 PAJ_RS18490 3995766 3996695 - transcriptional regulator homocysteine-binding%3B positive regulator of metA%2C metE and metH gene gene3697 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18490 PAJ_RS18495 PAJ_3346 PAJ_RS18495 3996834 3999104 + 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase gene gene3698 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18495 PAJ_RS18500 PAJ_3347 PAJ_RS18500 3999168 4000004 - carboxymethylenebutenolidase gene gene3699 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18500 PAJ_RS18505 PAJ_3348 PAJ_RS18505 4000308 4001069 + uridine phosphorylase catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway gene gene3700 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18505 PAJ_RS18510 PAJ_3349 PAJ_RS18510 4001225 4002724 + DNA recombination protein RmuC YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner gene gene3701 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18510 PAJ_RS18515 PAJ_3350 ubiE ubiE 4002801 4003559 + bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone gene gene3702 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18515 PAJ_RS18520 PAJ_3351 PAJ_RS18520 4003571 4004176 + membrane protein gene gene3703 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18520 PAJ_RS18525 PAJ_3352 ubiB ubiB 4004173 4005810 + ubiquinone biosynthesis regulatory protein kinase UbiB an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions gene gene3704 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18525 PAJ_RS18530 PAJ_3353 PAJ_RS18530 4005920 4006174 + protein translocase TatA gene gene3705 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18530 PAJ_RS18535 PAJ_3354 PAJ_RS18535 4006178 4006810 + sec-independent translocase gene gene3706 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18535 PAJ_RS18540 PAJ_3355 PAJ_RS18540 4006810 4007568 + preprotein translocase subunit TatC with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane gene gene3707 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18540 PAJ_RS18545 PAJ_3356 PAJ_RS18545 4007668 4008450 + DNase TatD magnesium dependent%3B involved in quality control of mutated Tat exported substrates%3B not involved in the Sec-independent protein export system gene gene3708 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18545 PAJ_RS18550 PAJ_3357 rfaH rfaH 4008447 4008935 - transcriptional activator RfaH gene gene3709 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18550 PAJ_RS18555 PAJ_3358 PAJ_RS18555 4009237 4010721 + 3-polyprenyl-4-hydroxybenzoate decarboxylase catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol gene gene3710 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18555 PAJ_RS18560 PAJ_3359 fre fre 4010764 4011465 + NAD(P)H-flavin reductase NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin gene gene3711 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18560 PAJ_RS18565 PAJ_3360 fadA fadA 4011532 4012695 - acetyl-CoA C-acyltransferase FadA FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids gene gene3712 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18565 PAJ_RS18570 PAJ_3361 fadB fadB 4012707 4014890 - multifunctional fatty acid oxidation complex subunit alpha includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids gene gene3713 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18570 PAJ_RS18575 PAJ_3362 PAJ_RS18575 4015076 4016407 + Xaa-Pro dipeptidase catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters gene gene3714 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18575 PAJ_RS18580 PAJ_3363 PAJ_RS18580 4016407 4017024 + YigZ family protein gene gene3715 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18580 PAJ_RS18585 PAJ_3364 PAJ_RS18585 4017056 4018507 + potassium transporter gene gene3716 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18585 PAJ_RS18590 PAJ_3365 PAJ_RS18590 4018526 4019062 + protoporphyrinogen oxidase gene gene3717 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18590 PAJ_RS18595 PAJ_r0017 PAJ_RS18595 4019470 4021017 + 16S ribosomal RNA rRNA gene3718 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18595 PAJ_RS18600 PAJ_t0065 PAJ_RS18600 4021102 4021176 + tRNA-Glu tRNA gene3719 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18600 PAJ_RS18605 PAJ_r0018 PAJ_RS18605 4021380 4024314 + 23S ribosomal RNA rRNA gene3720 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18605 PAJ_RS18610 PAJ_r0019 rrf rrf 4024398 4024513 + 5S ribosomal RNA rRNA gene3721 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18610 PAJ_RS18615 PAJ_3366 murB murB 4024874 4025911 + UDP-N-acetylenolpyruvoylglucosamine reductase catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis gene gene3722 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18615 PAJ_RS18620 PAJ_3367 PAJ_RS18620 4025908 4026867 + bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon gene gene3723 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18620 PAJ_RS18625 PAJ_3368 PAJ_RS18625 4026913 4027860 - type I pantothenate kinase gene gene3724 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18625 PAJ_RS18630 PAJ_t0066 PAJ_RS18630 4029016 4029091 + tRNA-Thr tRNA gene3725 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18630 PAJ_RS18635 PAJ_t0067 PAJ_RS18635 4029099 4029183 + tRNA-Tyr tRNA gene3726 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18635 PAJ_RS18640 PAJ_t0068 PAJ_RS18640 4029377 4029451 + tRNA-Gly tRNA gene3727 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18640 PAJ_RS18645 PAJ_t0069 PAJ_RS18645 4029457 4029532 + tRNA-Thr tRNA gene3728 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18645 PAJ_RS18650 PAJ_3369 tuf tuf 4029640 4030824 + elongation factor Tu EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu gene gene3729 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18650 PAJ_RS18655 PAJ_3370 secE secE 4031054 4031437 + preprotein translocase subunit SecE forms a complex with SecY and SecG%3B SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force gene gene3730 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18655 PAJ_RS18660 PAJ_3371 nusG nusG 4031439 4031984 + transcription termination/antitermination protein NusG Modulates Rho-dependent transcription termination gene gene3731 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18660 PAJ_RS18665 PAJ_3372 PAJ_RS18665 4032133 4032561 + 50S ribosomal protein L11 gene gene3732 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18665 PAJ_RS18670 PAJ_3373 PAJ_RS18670 4032565 4033269 + 50S ribosomal protein L1 gene gene3733 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18670 PAJ_RS18675 PAJ_3374 rplJ rplJ 4033693 4034190 + 50S ribosomal protein L10 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit gene gene3734 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18675 PAJ_RS18680 PAJ_3375 rplL rplL 4034254 4034616 + 50S ribosomal protein L7/L12 present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors gene gene3735 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18680 PAJ_RS18685 PAJ_3376 rpoB rpoB 4034947 4038975 + DNA-directed RNA polymerase subunit beta DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme gene gene3736 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18685 PAJ_RS18690 PAJ_3377 PAJ_RS18690 4039094 4043317 + DNA-directed RNA polymerase subunit beta' DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter gene gene3737 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18690 PAJ_RS18695 PAJ_3378 PAJ_RS18695 4043731 4045254 + GntR family transcriptional regulator gene gene3738 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18695 PAJ_RS18700 PAJ_RS18700 PAJ_RS18700 4045369 4046002 - thiamine-phosphate diphosphorylase catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate%3B frameshifted gene gene3739 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18700 PAJ_RS18705 PAJ_3380 PAJ_RS18705 4046003 4047925 - phosphomethylpyrimidine synthase ThiC catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis gene gene3740 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18705 PAJ_RS18710 PAJ_3381 PAJ_RS18710 4048290 4048793 - anti-RNA polymerase sigma 70 factor binds specifically to the major sigma factor sigma 70%3B active in stationary phase gene gene3741 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18710 PAJ_RS18715 PAJ_3382 nudC nudC 4048991 4049761 + NADH pyrophosphatase can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates gene gene3742 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18715 PAJ_RS18720 PAJ_3383 hemE hemE 4049802 4050872 + uroporphyrinogen decarboxylase catalyzes the formation of coproporphyrinogen from uroporphyrinogen III gene gene3743 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18720 PAJ_RS18725 PAJ_3384 PAJ_RS18725 4050872 4051540 + endonuclease V Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion/deletion mismatches%2C flaps%2C and pseudo-Y structures gene gene3744 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18725 PAJ_RS18730 PAJ_3385 PAJ_RS18730 4051603 4052193 + D-fructose-6-phosphate amidotransferase gene gene3745 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18730 PAJ_RS18735 PAJ_3386 PAJ_RS18735 4052382 4052654 + DNA-binding protein HU-alpha gene gene3746 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18735 PAJ_RS18740 PAJ_3387 PAJ_RS18740 4052723 4053385 + membrane protein gene gene3747 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18740 PAJ_RS18745 PAJ_3388 PAJ_RS18745 4053422 4054702 - phosphoribosylamine--glycine ligase catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis gene gene3748 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18745 PAJ_RS18750 PAJ_3389 purH purH 4054719 4056308 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase involved in de novo purine biosynthesis gene gene3749 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18750 PAJ_RS18755 PAJ_r0020 PAJ_RS18755 4056942 4058489 + 16S ribosomal RNA rRNA gene3750 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18755 PAJ_RS18760 PAJ_t0070 PAJ_RS18760 4058557 4058633 + tRNA-Ile tRNA gene3751 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18760 PAJ_RS18765 PAJ_t0071 PAJ_RS18765 4058776 4058851 + tRNA-Ala tRNA gene3752 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18765 PAJ_RS18770 PAJ_r0021 PAJ_RS18770 4059077 4062011 + 23S ribosomal RNA rRNA gene3753 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18770 PAJ_RS18775 PAJ_r0022 rrf rrf 4062221 4062336 + 5S ribosomal RNA rRNA gene3754 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18775 PAJ_RS18780 PAJ_RS18780 PAJ_RS18780 4062710 4062925 - hypothetical protein gene gene3755 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18780 PAJ_RS18785 PAJ_3390 PAJ_RS18785 4063524 4064594 + hypothetical protein gene gene3756 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18785 PAJ_RS18790 PAJ_3391 PAJ_RS18790 4064563 4065288 + molybdenum ABC transporter substrate-binding protein gene gene3757 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18790 PAJ_RS18795 PAJ_3392 PAJ_RS18795 4065469 4066398 + homoserine O-succinyltransferase catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis gene gene3758 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18795 PAJ_RS18800 PAJ_3393 PAJ_RS18800 4066661 4068259 + malate synthase A Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle gene gene3759 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18800 PAJ_RS18805 PAJ_3394 PAJ_RS18805 4068277 4069578 + isocitrate lyase gene gene3760 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18805 PAJ_RS18810 PAJ_3395 aceK aceK 4069637 4071442 + bifunctional isocitrate dehydrogenase kinase/phosphatase catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol gene gene3761 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18810 PAJ_RS18815 PAJ_3396 PAJ_RS18815 4071400 4072170 - transcriptional regulator regulates the expression of uxuBA gene gene3762 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18815 PAJ_RS18820 PAJ_3397 PAJ_RS18820 4072379 4073641 - glucuronide uptake porin UidC gene gene3763 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18820 PAJ_RS18825 PAJ_3398 PAJ_RS18825 4073762 4075291 - MFS transporter gene gene3764 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18825 PAJ_RS18830 PAJ_3399 PAJ_RS18830 4075890 4077062 + serine hydrolase gene gene3765 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18830 PAJ_RS18835 PAJ_3400 PAJ_RS18835 4077199 4078029 - IclR family transcriptional regulator regulates the glyoxylate bypass operon (aceBAK)%2C which encodes isocitrate lyase%2C malate synthase and isocitrate dehydrogenase kinase/phosphorylase gene gene3766 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18835 PAJ_RS18840 PAJ_3401 metH metH 4078221 4081904 + methionine synthase one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity gene gene3767 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18840 PAJ_RS18845 PAJ_3402 PAJ_RS18845 4081937 4084027 - membrane protein gene gene3768 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18845 PAJ_RS18850 PAJ_3403 PAJ_RS18850 4084027 4084770 - hypothetical protein gene gene3769 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18850 PAJ_RS18855 PAJ_3404 PAJ_RS18855 4084767 4085414 - hypothetical protein gene gene3770 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18855 PAJ_RS18860 PAJ_3405 PAJ_RS18860 4085608 4085856 - membrane protein gene gene3771 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18860 PAJ_RS18865 PAJ_3406 pgi pgi 4086423 4088069 - glucose-6-phosphate isomerase functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family gene gene3772 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18865 PAJ_RS18870 PAJ_3407 PAJ_RS18870 4088772 4090124 + lysine-sensitive aspartokinase 3 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive gene gene3773 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18870 PAJ_RS18875 PAJ_3408 PAJ_RS18875 4090242 4091162 + sodium transporter gene gene3774 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18875 PAJ_RS18880 PAJ_3409 PAJ_RS18880 4091212 4092837 - membrane protein gene gene3775 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18880 PAJ_RS18885 PAJ_3410 PAJ_RS18885 4093235 4094047 - hypothetical protein gene gene3776 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18885 PAJ_RS18890 PAJ_3411 PAJ_RS18890 4094675 4095085 + phosphate-starvation-inducible protein PsiE gene gene3777 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18890 PAJ_RS18895 PAJ_3412 ubiC ubiC 4095170 4095682 + chorismate lyase catalyzes the formation of 4-hydroxybenzoate from chorismate gene gene3778 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18895 PAJ_RS18900 PAJ_3413 ubiA ubiA 4095694 4096578 + 4-hydroxybenzoate octaprenyltransferase catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway gene gene3779 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18900 PAJ_RS18905 PAJ_3414 PAJ_RS18905 4096708 4099134 - glycerol-3-phosphate 1-O-acyltransferase PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA gene gene3780 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18905 PAJ_RS18910 PAJ_3415 PAJ_RS18910 4099263 4099631 + diacylglycerol kinase catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate gene gene3781 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18910 PAJ_RS18915 PAJ_3416 PAJ_RS18915 4099738 4100352 + repressor LexA Represses a number of genes involved in the response to DNA damage gene gene3782 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18915 PAJ_RS18920 PAJ_3417 PAJ_RS18920 4100463 4101785 + MATE family efflux transporter gene gene3783 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18920 PAJ_RS18925 PAJ_3418 PAJ_RS18925 4101957 4102169 + CsbD family protein gene gene3784 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18925 PAJ_RS18930 PAJ_3419 PAJ_RS18930 4102240 4102761 - transcriptional regulator Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB gene gene3785 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18930 PAJ_RS18935 PAJ_3420 PAJ_RS18935 4103190 4104461 + conjugal transfer protein TraF gene gene3786 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18935 PAJ_RS18940 PAJ_3421 PAJ_RS18940 4104560 4105555 + tRNA dihydrouridine synthase DusA gene gene3787 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18940 PAJ_RS18945 PAJ_3422 PAJ_RS18945 4105718 4105984 + phage-shock protein gene gene3788 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18945 PAJ_RS18950 PAJ_3423 PAJ_RS18950 4106166 4107149 - quinone oxidoreductase gene gene3789 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18950 PAJ_RS18955 PAJ_3424 PAJ_RS18955 4107246 4108652 + replicative DNA helicase unwinds double stranded DNA gene gene3790 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18955 PAJ_RS18960 PAJ_3425 PAJ_RS18960 4108778 4109269 + AsnC family transcriptional regulator gene gene3791 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18960 PAJ_RS18965 PAJ_3426 PAJ_RS18965 4109465 4110079 + membrane protein gene gene3792 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18965 PAJ_RS18970 PAJ_3427 PAJ_RS18970 4110107 4111315 + aromatic amino acid aminotransferase catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate gene gene3793 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18970 PAJ_RS18975 PAJ_3428 PAJ_RS18975 4111441 4111857 + thiamin phosphate synthase gene gene3794 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18975 PAJ_RS18980 PAJ_3429 PAJ_RS18980 4111860 4112183 + hypothetical protein gene gene3795 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18980 PAJ_RS18985 PAJ_3430 PAJ_RS18985 4112222 4113286 - zinc-binding dehydrogenase gene gene3796 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18985 PAJ_RS18990 PAJ_RS18990 PAJ_RS18990 4114098 4114343 + hypothetical protein gene gene3797 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18990 PAJ_RS18995 PAJ_3431 PAJ_RS18995 4114566 4117394 - excinuclease ABC subunit A gene gene3798 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS18995 PAJ_RS19000 PAJ_3432 PAJ_RS19000 4117617 4118162 + ssDNA-binding protein binds to single stranded DNA and PriA helcase facilitate replication restart gene gene3799 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19000 PAJ_RS19005 PAJ_3433 PAJ_RS19005 4118258 4118851 - hypothetical protein gene gene3800 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19005 PAJ_RS19010 PAJ_RS19010 PAJ_RS19010 4118927 4119445 - isochorismatase gene gene3801 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19010 PAJ_RS19015 PAJ_3435 PAJ_RS19015 4119560 4120402 + AraC family transcriptional regulator gene gene3802 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19015 PAJ_RS19020 PAJ_RS19020 PAJ_RS19020 4122010 4122406 - transposase frameshifted gene gene3803 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19020 PAJ_RS19025 PAJ_3437 PAJ_RS19025 4122928 4124184 + hypothetical protein gene gene3804 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19025 PAJ_RS19030 PAJ_3438 PAJ_RS19030 4124193 4125143 + hypothetical protein gene gene3805 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19030 PAJ_RS19035 PAJ_3439 PAJ_RS19035 4125196 4125477 - membrane protein gene gene3806 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19035 PAJ_RS19040 PAJ_3440 PAJ_RS19040 4125723 4126148 - transcriptional regulator regulates genes involved in response to oxidative stress gene gene3807 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19040 PAJ_RS19045 PAJ_3441 PAJ_RS19045 4126313 4126798 + redox-sensitive transcriptional activator SoxR gene gene3808 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19045 PAJ_RS19050 PAJ_3442 PAJ_RS19050 4126838 4127503 + glutathione S-transferase gene gene3809 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19050 PAJ_RS19055 PAJ_3443 PAJ_RS19055 4127841 4129190 + permease gene gene3810 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19055 PAJ_RS19060 PAJ_3444 PAJ_RS19060 4129335 4130987 + Na+/H+ antiporter gene gene3811 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19060 PAJ_RS19065 PAJ_3445 PAJ_RS19065 4131052 4131954 - transcriptional regulator gene gene3812 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19065 PAJ_RS19070 PAJ_3446 PAJ_RS19070 4132052 4132483 + CidA/LrgA family protein gene gene3813 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19070 PAJ_RS19075 PAJ_3447 PAJ_RS19075 4132476 4133171 + murein hydrolase effector protein LrgB gene gene3814 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19075 PAJ_RS19080 PAJ_3449 PAJ_RS19080 4133355 4133900 + membrane protein gene gene3815 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19080 PAJ_RS19085 PAJ_3450 actP actP 4133968 4135620 - cation acetate symporter member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake gene gene3816 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19085 PAJ_RS19090 PAJ_3451 PAJ_RS19090 4135620 4135949 - membrane protein gene gene3817 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19090 PAJ_RS19095 PAJ_3452 PAJ_RS19095 4136079 4138034 - acetyl-coenzyme A synthetase Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA gene gene3818 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19095 PAJ_RS19100 PAJ_3453 PAJ_RS19100 4138620 4139921 + glutamate/aspartate:proton symporter GltP gene gene3819 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19100 PAJ_RS19105 PAJ_3454 murQ murQ 4140072 4140983 + N-acetylmuramic acid 6-phosphate etherase catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway gene gene3820 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19105 PAJ_RS19110 PAJ_3455 murP murP 4140983 4142416 + PTS N-acetylmuramic acid transporter subunits IIBC belongs to PEP-dependent PTS system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel%3B requires crr-encoded enzyme IIA-glucose component gene gene3821 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19110 PAJ_RS19115 PAJ_3456 PAJ_RS19115 4142739 4144283 + aerotaxis receptor gene gene3822 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19115 PAJ_RS19120 PAJ_3457 PAJ_RS19120 4144280 4145245 - AraC family transcriptional regulator gene gene3823 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19120 PAJ_RS19125 PAJ_3458 PAJ_RS19125 4145350 4146537 + MFS transporter gene gene3824 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19125 PAJ_RS19130 PAJ_3459 PAJ_RS19130 4146752 4146961 + hypothetical protein gene gene3825 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19130 PAJ_RS19135 PAJ_3460 PAJ_RS19135 4147503 4148750 - microcin B17 transporter in Escherichia coli SbmA is involved in uptake of microcin J25%3B functions along with FhuA%2C TonB%2C and ExbB/D in this capacity%3B in Sinorhizobium meliloti%2C BacA is essential and required for symbiosis%3B defects appear to affect the cell envelope gene gene3826 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19135 PAJ_RS19140 PAJ_3461 PAJ_RS19140 4149024 4149749 + gluconate 2-dehydrogenase gene gene3827 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19140 PAJ_RS19145 PAJ_3462 PAJ_RS19145 4149752 4151536 + GMC family oxidoreductase gene gene3828 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19145 PAJ_RS19150 PAJ_3463 PAJ_RS19150 4151548 4152858 + alcohol dehydrogenase gene gene3829 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19150 PAJ_RS19155 PAJ_3464 PAJ_RS19155 4152902 4154311 - MFS transporter gene gene3830 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19155 PAJ_RS19160 PAJ_3465 PAJ_RS19160 4154667 4156211 - methyl-accepting chemotaxis protein II Tar gene gene3831 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19160 PAJ_RS19165 PAJ_3466 PAJ_RS19165 4156783 4157220 + hypothetical protein gene gene3832 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19165 PAJ_RS19170 PAJ_3467 PAJ_RS19170 4157308 4158174 - nucleoside-specific channel-forming protein Tsx gene gene3833 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19170 PAJ_RS19175 PAJ_3468 PAJ_RS19175 4158449 4159799 - QseC frameshifted gene gene3834 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19175 PAJ_RS19180 PAJ_3469 PAJ_RS19180 4159796 4160455 - DNA-binding response regulator gene gene3835 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19180 PAJ_RS19185 PAJ_3470 PAJ_RS19185 4160680 4161048 + transcriptional regulator gene gene3836 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19185 PAJ_RS19190 PAJ_3471 PAJ_RS19190 4161234 4162130 + LysR family transcriptional regulator gene gene3837 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19190 PAJ_RS19195 PAJ_3472 PAJ_RS19195 4162240 4163463 + multidrug resistance protein MdtG gene gene3838 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19195 PAJ_RS19200 PAJ_3473 PAJ_RS19200 4163512 4165902 - glucose dehydrogenase quinoprotein glucose dehydrogenase%3B catalyzes the formation of D-glucono-1%2C5-lactone from D-glucose and ubiquinone gene gene3839 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19200 PAJ_RS19205 PAJ_3474 PAJ_RS19205 4166170 4166775 - hypothetical protein gene gene3840 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19205 PAJ_RS19210 PAJ_3475 PAJ_RS19210 4167336 4168496 - oxidoreductase gene gene3841 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19210 PAJ_RS19215 PAJ_3476 PAJ_RS19215 4168771 4169646 + hypothetical protein gene gene3842 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19215 PAJ_RS19220 PAJ_3477 PAJ_RS19220 4169643 4170761 + XylR gene gene3843 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19220 PAJ_RS19225 PAJ_3478 PAJ_RS19225 4170784 4171875 - sugar ABC transporter ATP-binding protein gene gene3844 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19225 PAJ_RS19230 PAJ_3479 PAJ_RS19230 4171888 4172487 - acetyltransferase gene gene3845 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19230 PAJ_RS19235 PAJ_3480 PAJ_RS19235 4173014 4174345 + ABC transporter substrate-binding protein gene gene3846 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19235 PAJ_RS19240 PAJ_3481 PAJ_RS19240 4174409 4175281 + membrane protein gene gene3847 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19240 PAJ_RS19245 PAJ_3482 PAJ_RS19245 4175281 4176096 + sugar ABC transporter permease gene gene3848 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19245 PAJ_RS19250 PAJ_3483 PAJ_RS19250 4176134 4177465 + hypothetical protein gene gene3849 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19250 PAJ_RS19255 PAJ_3484 PAJ_RS19255 4177467 4178537 - tartrate dehydrogenase gene gene3850 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19255 PAJ_RS19260 PAJ_3486 PAJ_RS19260 4178673 4179605 + LysR family transcriptional regulator gene gene3851 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19260 PAJ_RS19265 PAJ_3487 PAJ_RS19265 4179760 4181196 + methyl-accepting chemotaxis protein gene gene3852 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19265 PAJ_RS19270 PAJ_RS19270 PAJ_RS19270 4181355 4181645 - hypothetical protein gene gene3853 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19270 PAJ_RS19275 PAJ_3488 PAJ_RS19275 4181657 4182520 - thiol:disulfide oxidoreductase YghU%3B B2989%3B one of eight putative glutathione transferase proteins from E. coli gene gene3854 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19275 PAJ_RS19280 PAJ_3489 PAJ_RS19280 4182749 4183666 + aminoimidazole riboside kinase gene gene3855 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19280 PAJ_RS19285 PAJ_3490 lacZ lacZ 4184171 4187257 + beta-D-galactosidase forms a homotetramer%3B hydrolyzes lactose disaccharide to galactose and glucose%3B converts lactose to allolactose which is the natural inducer of the lac operon gene gene3856 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19285 PAJ_RS19290 PAJ_3491 lacY lacY 4187307 4188551 + galactoside permease lactose/proton symporter%3B mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides%3B member of major facilitator superfamily%3B functions as a monomer with 12 transmembrane segments gene gene3857 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19290 PAJ_RS19295 PAJ_3492 PAJ_RS19295 4188802 4190320 + porin frameshifted gene gene3858 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19295 PAJ_RS19300 PAJ_3493 PAJ_RS19300 4190387 4191757 + PTS sugar transporter phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene3859 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19300 PAJ_RS19305 PAJ_3494 PAJ_RS19305 4191757 4193166 + glycosyl hydrolase family 32 gene gene3860 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19305 PAJ_RS19310 PAJ_3495 PAJ_RS19310 4193196 4194212 + sucrose operon repressor gene gene3861 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19310 PAJ_RS19315 PAJ_3496 dsbG dsbG 4194219 4194971 - thiol:disulfide interchange protein DsbG Involved in disulfide bond formation gene gene3862 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19315 PAJ_RS19320 PAJ_RS19320 PAJ_RS19320 4194985 4195419 - membrane protein gene gene3863 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19320 PAJ_RS19325 PAJ_RS19325 PAJ_RS19325 4195435 4195860 - hypothetical protein gene gene3864 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19325 PAJ_RS19330 PAJ_3497 PAJ_RS19330 4195897 4197180 - hypothetical protein gene gene3865 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19330 PAJ_RS19335 PAJ_3498 PAJ_RS19335 4197198 4197989 - permease gene gene3866 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19335 PAJ_RS19340 PAJ_3499 PAJ_RS19340 4198175 4199410 + pyridine nucleotide-disulfide oxidoreductase gene gene3867 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19340 PAJ_RS19345 PAJ_RS19345 PAJ_RS19345 4199421 4199741 - hypothetical protein gene gene3868 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19345 PAJ_RS19350 PAJ_3500 PAJ_RS19350 4199946 4200455 - phenolic acid decarboxylase padC gene gene3869 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19350 PAJ_RS19355 PAJ_3501 PAJ_RS19355 4200554 4201423 + LysR family transcriptional regulator gene gene3870 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19355 PAJ_RS19360 PAJ_RS19360 PAJ_RS19360 4201459 4201890 - S-(hydroxymethyl)glutathione synthase gene gene3871 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19360 PAJ_RS19365 PAJ_3502 PAJ_RS19365 4201928 4202818 - NADPH-dependent ferric siderophore reductase gene gene3872 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19365 PAJ_RS19370 PAJ_3503 PAJ_RS19370 4202834 4204045 - MFS transporter gene gene3873 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19370 PAJ_RS19375 PAJ_3504 PAJ_RS19375 4204178 4205902 + aerobactin synthase IucA gene gene3874 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19375 PAJ_RS19380 PAJ_3505 PAJ_RS19380 4205903 4206850 + N(6)-hydroxylysine O-acetyltransferase gene gene3875 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19380 PAJ_RS19385 PAJ_3507 PAJ_RS19385 4206850 4208583 + aerobactin synthase IucC gene gene3876 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19385 PAJ_RS19390 PAJ_3508 PAJ_RS19390 4208587 4209921 + lysine 6-monooxygenase gene gene3877 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19390 PAJ_RS19395 PAJ_3509 PAJ_RS19395 4209949 4212144 + ligand-gated channel protein gene gene3878 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19395 PAJ_RS19400 PAJ_3510 PAJ_RS19400 4212354 4214015 + transcription factor gene gene3879 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19400 PAJ_RS19405 PAJ_3511 PAJ_RS19405 4214059 4215132 - acyltransferase gene gene3880 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19405 PAJ_RS19410 PAJ_3512 PAJ_RS19410 4215396 4215914 - hypothetical protein gene gene3881 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19410 PAJ_RS19415 PAJ_3513 araD araD 4215953 4216651 - L-ribulose-5-phosphate 4-epimerase catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source gene gene3882 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19415 PAJ_RS19420 PAJ_3514 PAJ_RS19420 4216648 4217508 - L-xylulose 5-phosphate 3-epimerase L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate gene gene3883 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19420 PAJ_RS19425 PAJ_3515 sgbH sgbH 4217505 4218161 - 3-keto-L-gulonate-6-phosphate decarboxylase catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate gene gene3884 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19425 PAJ_RS19430 PAJ_3517 PAJ_RS19430 4218158 4219639 - carbohydrate kinase catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate%2C respectively gene gene3885 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19430 PAJ_RS19435 PAJ_3518 PAJ_RS19435 4219636 4220931 - 2-ketogluconate transporter gene gene3886 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19435 PAJ_RS19440 PAJ_3519 PAJ_RS19440 4220947 4221414 - hypothetical protein gene gene3887 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19440 PAJ_RS19445 PAJ_3520 PAJ_RS19445 4221425 4222423 - 3-dehydro-L-gulonate 2-dehydrogenase NAD(P)H-dependent%3B catalyzes the reduction of 2%2C3-diketo-L-gulonate to 3-keto-L-gulonate gene gene3888 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19445 PAJ_RS19450 PAJ_RS19450 PAJ_RS19450 4222484 4222666 + hypothetical protein gene gene3889 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19450 PAJ_RS19455 PAJ_3521 PAJ_RS19455 4222676 4223506 - gluconolactonase gene gene3890 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19455 PAJ_RS19460 PAJ_3522 PAJ_RS19460 4223521 4224621 - hypothetical protein gene gene3891 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19460 PAJ_RS19465 PAJ_3523 PAJ_RS19465 4224618 4225718 - ABC transporter permease gene gene3892 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19465 PAJ_RS19470 PAJ_3524 PAJ_RS19470 4225741 4227267 - sugar ABC transporter ATP-binding protein gene gene3893 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19470 PAJ_RS19475 PAJ_3525 PAJ_RS19475 4227586 4228398 + transcriptional regulator gene gene3894 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19475 PAJ_RS19480 PAJ_3526 PAJ_RS19480 4228424 4228945 - phosphinothricin acetyltransferase gene gene3895 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19480 PAJ_RS19485 PAJ_3527 PAJ_RS19485 4229123 4229662 - ATPase AAA gene gene3896 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19485 PAJ_RS19490 PAJ_RS19490 PAJ_RS19490 4229733 4230044 - cupin gene gene3897 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19490 PAJ_RS19495 PAJ_3528 PAJ_RS19495 4230257 4231597 - porin gene gene3898 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19495 PAJ_RS19500 PAJ_3529 PAJ_RS19500 4231805 4232767 - NADP-dependent aryl-alcohol dehydrogenase gene gene3899 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19500 PAJ_RS19505 PAJ_3530 PAJ_RS19505 4233054 4234307 + exoglucanase/xylanase precursor Cex gene gene3900 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19505 PAJ_RS19510 PAJ_3531 PAJ_RS19510 4234290 4235294 - AraC family transcriptional regulator gene gene3901 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19510 PAJ_RS19515 PAJ_3532 PAJ_RS19515 4235414 4236193 + alpha/beta hydrolase gene gene3902 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19515 PAJ_RS19520 PAJ_3533 PAJ_RS19520 4236218 4236844 + azoreductase gene gene3903 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19520 PAJ_RS19525 PAJ_RS19525 PAJ_RS19525 4236863 4237186 + hypothetical protein gene gene3904 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19525 PAJ_RS19530 PAJ_3534 PAJ_RS19530 4237230 4238891 - methyl-accepting chemotaxis protein serine sensor receptor gene gene3905 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19530 PAJ_RS19535 PAJ_3535 PAJ_RS19535 4239454 4239666 - cold-shock protein gene gene3906 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19535 PAJ_RS19540 PAJ_3536 PAJ_RS19540 4240100 4240324 + iron transporter gene gene3907 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19540 PAJ_RS19545 PAJ_3537 feoB feoB 4240324 4242644 + ferrous iron transporter B cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake%3B frameshifted gene gene3908 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19545 PAJ_RS19550 PAJ_3538 PAJ_RS19550 4243507 4244505 + amino acid ABC transporter substrate-binding protein gene gene3909 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19550 PAJ_RS19555 PAJ_3539 PAJ_RS19555 4244502 4245806 + hypothetical protein gene gene3910 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19555 PAJ_RS19560 PAJ_3540 PAJ_RS19560 4246209 4247204 + glycosyl transferase gene gene3911 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19560 PAJ_RS19565 PAJ_RS19565 PAJ_RS19565 4247201 4247485 - hypothetical protein gene gene3912 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19565 PAJ_RS19570 PAJ_RS19570 PAJ_RS19570 4247800 4248068 + hypothetical protein frameshifted gene gene3913 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19570 PAJ_RS19575 PAJ_3541 PAJ_RS19575 4248775 4249629 + hypothetical protein gene gene3914 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19575 PAJ_RS19580 PAJ_RS19580 PAJ_RS19580 4249689 4250108 + hypothetical protein gene gene3915 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19580 PAJ_RS19585 PAJ_t0072 PAJ_RS19585 4251038 4251113 - tRNA-Phe tRNA gene3916 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19585 PAJ_RS19590 PAJ_3542 PAJ_RS19590 4251220 4251798 - transcriptional regulator gene gene3917 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19590 PAJ_RS19595 PAJ_3543 dipZ dipZ 4251863 4253557 - protein-disulfide reductase DsbD two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm gene gene3918 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19595 PAJ_RS19600 PAJ_3544 PAJ_RS19600 4253533 4253847 - divalent ion tolerance protein CutA copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals gene gene3919 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19600 PAJ_RS19605 PAJ_3545 PAJ_RS19605 4253905 4255206 - C4-dicarboxylate ABC transporter gene gene3920 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19605 PAJ_RS19610 PAJ_3546 aspA aspA 4255321 4256755 - class II fumarate hydratase catalyzes the formation of fumarate from aspartate%3B frameshifted gene gene3921 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19610 PAJ_RS19615 PAJ_3547 fxsA fxsA 4257077 4257538 + exclusion suppressor FxsA F exclusion of bacteriophage T7%3B overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7%3B interacts with the F plasmid-encoded PifA protein%3B inner membrane protein gene gene3922 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19615 PAJ_RS19620 PAJ_3548 groES groES 4257771 4258064 + molecular chaperone GroES 10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring gene gene3923 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19620 PAJ_RS19625 PAJ_3549 groEL groEL 4258113 4259762 + molecular chaperone GroEL 60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth gene gene3924 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19625 PAJ_RS19630 PAJ_3550 PAJ_RS19630 4259955 4260305 + membrane protein gene gene3925 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19630 PAJ_RS19635 PAJ_3551 PAJ_RS19635 4260467 4261495 - EF-P beta-lysylation protein EpmB gene gene3926 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19635 PAJ_RS19640 PAJ_3552 PAJ_RS19640 4261536 4262102 + elongation factor P gene gene3927 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19640 PAJ_RS19645 PAJ_3553 PAJ_RS19645 4262151 4262282 + entericidin A gene gene3928 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19645 PAJ_RS19650 PAJ_3554 PAJ_RS19650 4262387 4262521 + entericidin B EcnB gene gene3929 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19650 PAJ_RS19655 PAJ_3555 PAJ_RS19655 4262562 4263086 - hypothetical protein lipocalin%3B globomycin-sensitive outer membrane lipoprotein gene gene3930 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19655 PAJ_RS19660 PAJ_3556 PAJ_RS19660 4263221 4264198 + elongation factor P lysine(34) lysyltransferase poxA%3B regulates pyruvate oxidase poxB gene gene3931 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19660 PAJ_RS19665 PAJ_3557 PAJ_RS19665 4264283 4265344 - outer membrane-stress sensor serine endopeptidase DegS gene gene3932 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19665 PAJ_RS19670 PAJ_3558 PAJ_RS19670 4265434 4266816 - serine endoprotease gene gene3933 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19670 PAJ_RS19675 PAJ_3559 PAJ_RS19675 4266926 4267327 - cytochrome D ubiquinol oxidase subunit III gene gene3934 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19675 PAJ_RS19680 PAJ_3560 PAJ_RS19680 4267505 4268632 + AFG1 family ATPase gene gene3935 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19680 PAJ_RS19685 PAJ_3561 PAJ_RS19685 4268858 4269286 + 50S ribosomal protein L13 gene gene3936 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19685 PAJ_RS19690 PAJ_3562 PAJ_RS19690 4269302 4269694 + 30S ribosomal protein S9 gene gene3937 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19690 PAJ_RS19695 PAJ_3563 sspA sspA 4270011 4270652 + stringent starvation protein A transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation gene gene3938 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19695 PAJ_RS19700 PAJ_3564 PAJ_RS19700 4270656 4271141 + stringent starvation protein B gene gene3939 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19700 PAJ_RS19705 PAJ_3565 PAJ_RS19705 4271255 4273012 - sulfite reductase subunit alpha gene gene3940 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19705 PAJ_RS19710 PAJ_3566 PAJ_RS19710 4273190 4278721 - glutamate synthase gene gene3941 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19710 PAJ_RS19715 PAJ_3567 PAJ_RS19715 4279612 4281948 + aerobic respiration two-component sensor histidine kinase ArcB sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA gene gene3942 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19715 PAJ_RS19720 PAJ_3568 mtgA mtgA 4282828 4283547 + monofunctional biosynthetic peptidoglycan transglycosylase glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan gene gene3943 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19720 PAJ_RS19725 PAJ_3569 PAJ_RS19725 4283550 4283822 - phosphohistidinoprotein-hexose phosphotransferase gene gene3944 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19725 PAJ_RS19730 PAJ_3570 PAJ_RS19730 4283819 4284673 - RNase adaptor protein RapZ glucosamine-6-phosphate regulated%3B inactivates the glmS upregulator glmZ gene gene3945 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19730 PAJ_RS19735 PAJ_3571 PAJ_RS19735 4284723 4285202 - PTS sugar transporter subunit IIA involved in nitrogen metabolism%3B protein IIA is phosphorylated by enzyme I(Ntr) gene gene3946 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19735 PAJ_RS19740 PAJ_3572 PAJ_RS19740 4285355 4285642 - ribosome hibernation promoting factor HPF YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing gene gene3947 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19740 PAJ_RS19745 PAJ_3573 PAJ_RS19745 4285664 4287100 - RNA polymerase sigma-54 factor sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen gene gene3948 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19745 PAJ_RS19750 PAJ_3574 PAJ_RS19750 4287149 4287874 - ABC transporter ATP-binding protein gene gene3949 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19750 PAJ_RS19755 PAJ_3575 PAJ_RS19755 4287880 4288434 - sugar ABC transporter substrate-binding protein LptA%3B periplasmic binding protein part of a putative ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system gene gene3950 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19755 PAJ_RS19760 PAJ_3576 PAJ_RS19760 4288403 4288984 - LPS export ABC transporter periplasmic protein LptC gene gene3951 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19760 PAJ_RS19765 PAJ_3577 PAJ_RS19765 4288981 4289547 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis gene gene3952 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19765 PAJ_RS19770 PAJ_3578 PAJ_RS19770 4289561 4290547 - D-arabinose 5-phosphate isomerase gene gene3953 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19770 PAJ_RS19775 PAJ_3579 PAJ_RS19775 4290564 4291544 - calcium/sodium antiporter YrbG%3B inner membrane protein involved in cell envelope integrity%3B putative sodium ion/calcium ion exchanger%3B in E. coli it is non essential for cell viability%3B member of the YRBG family of cation/Ca2+ exchangers gene gene3954 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19775 PAJ_RS19780 PAJ_3580 PAJ_RS19780 4291757 4292572 + ABC transporter ATP-binding protein ABC transporter maintaining outer membrane lipid asymmetry gene gene3955 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19780 PAJ_RS19785 PAJ_3581 PAJ_RS19785 4292577 4293359 + ABC transporter permease gene gene3956 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19785 PAJ_RS19790 PAJ_3582 PAJ_RS19790 4293364 4293918 + outer membrane lipid asymmetry maintenance protein MlaD gene gene3957 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19790 PAJ_RS19795 PAJ_3583 PAJ_RS19795 4293935 4294567 + ABC transporter substrate-binding protein involved in maintaining outer membrane lipid asymmetry gene gene3958 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19795 PAJ_RS19800 PAJ_3584 PAJ_RS19800 4294567 4294863 + anti-sigma B factor antagonist gene gene3959 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19800 PAJ_RS19805 PAJ_3585 PAJ_RS19805 4294986 4295243 + hypothetical protein gene gene3960 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19805 PAJ_RS19810 PAJ_3586 PAJ_RS19810 4295308 4296567 + UDP-N-acetylglucosamine 1-carboxyvinyltransferase gene gene3961 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19810 PAJ_RS19815 PAJ_3587 PAJ_RS19815 4296641 4296923 - DNA-binding protein frameshifted gene gene3962 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19815 PAJ_RS19820 PAJ_3588 PAJ_RS19820 4297157 4298128 - octaprenyl diphosphate synthase gene gene3963 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19820 PAJ_RS19825 PAJ_3589 rplU rplU 4298384 4298695 + 50S ribosomal protein L21 gene gene3964 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19825 PAJ_RS19830 PAJ_3591 rpmA rpmA 4298711 4298968 + 50S ribosomal protein L27 involved in the peptidyltransferase reaction during translation gene gene3965 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19830 PAJ_RS19835 PAJ_3592 obgE obgE 4299210 4300382 + GTPase ObgE ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication gene gene3966 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19835 PAJ_RS19840 PAJ_3593 PAJ_RS19840 4300430 4300855 - acyl-CoA esterase required for efficient enterobactin production gene gene3967 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19840 PAJ_RS19845 PAJ_3594 PAJ_RS19845 4301331 4302764 - serine-type D-Ala-D-Ala carboxypeptidase penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains gene gene3968 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19845 PAJ_RS19850 PAJ_3595 greA greA 4303011 4303487 + transcription elongation factor GreA necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus gene gene3969 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19850 PAJ_RS19855 PAJ_3596 PAJ_RS19855 4303594 4303887 - RNA-binding protein RNA binding protein found associated to pre-50S subunit of the ribosome%3B putative role in ribosome assembly%3B necessary for optimal growth but not cell viability gene gene3970 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19855 PAJ_RS19860 PAJ_3597 rrmJ rrmJ 4304014 4304643 + 23S rRNA (uridine(2552)-2'-O)-methyltransferase Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit gene gene3971 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19860 PAJ_RS19865 PAJ_3598 hflB hflB 4304757 4306689 + ATP-dependent metalloprotease inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins%3B frameshifted gene gene3972 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19865 PAJ_RS19870 PAJ_3599 folP folP 4306770 4307603 + dihydropteroate synthase catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate gene gene3973 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19870 PAJ_RS19875 PAJ_3600 glmM glmM 4307610 4308944 + phosphoglucosamine mutase catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate gene gene3974 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19875 PAJ_RS19880 PAJ_3601 secG secG 4309163 4309498 + preprotein translocase subunit SecG gene gene3975 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19880 PAJ_RS19885 PAJ_t0073 PAJ_RS19885 4309555 4309641 + tRNA-Leu tRNA gene3976 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19885 PAJ_RS19890 PAJ_t0074 PAJ_RS19890 4309701 4309777 + tRNA-Met tRNA gene3977 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19890 PAJ_RS19895 PAJ_3602 PAJ_RS19895 4309989 4310441 + ribosome maturation factor required for the maturation of the 30S ribosomal subunits gene gene3978 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19895 PAJ_RS19900 PAJ_3603 nusA nusA 4310466 4311953 + transcription termination/antitermination protein NusA modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination gene gene3979 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19900 PAJ_RS19905 PAJ_3604 infB infB 4311971 4314655 + translation initiation factor IF-2 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex gene gene3980 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19905 PAJ_RS19910 PAJ_3605 rbfA rbfA 4314721 4315128 + ribosome-binding factor A associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock gene gene3981 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19910 PAJ_RS19915 PAJ_3606 truB truB 4315128 4316072 + tRNA pseudouridine(55) synthase TruB catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs gene gene3982 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19915 PAJ_RS19920 PAJ_3607 PAJ_RS19920 4316196 4316465 + 30S ribosomal protein S15 gene gene3983 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19920 PAJ_RS19925 PAJ_3608 PAJ_RS19925 4316772 4318901 + polyribonucleotide nucleotidyltransferase gene gene3984 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19925 PAJ_RS19930 PAJ_3610 PAJ_RS19930 4319031 4319915 + lipoprotein NlpI lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing gene gene3985 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19930 PAJ_RS19935 PAJ_3611 PAJ_RS19935 4320093 4321985 + DEAD/DEAH family ATP-dependent RNA helicase participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division gene gene3986 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19935 PAJ_RS19940 PAJ_3612 PAJ_RS19940 4322077 4323087 - hypothetical protein gene gene3987 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19940 PAJ_RS19945 PAJ_3613 PAJ_RS19945 4323200 4324084 - U32 family peptidase gene gene3988 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19945 PAJ_RS19950 PAJ_3614 PAJ_RS19950 4324094 4325089 - protease gene gene3989 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19950 PAJ_RS19955 PAJ_3615 PAJ_RS19955 4325244 4325819 + lipid carrier protein YhbT gene gene3990 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19955 PAJ_RS19960 PAJ_3616 PAJ_RS19960 4325813 4326319 + N-acetyltransferase gene gene3991 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19960 PAJ_RS19965 PAJ_3617 PAJ_RS19965 4326303 4326590 - hypothetical protein gene gene3992 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19965 PAJ_RS19970 PAJ_3618 PAJ_RS19970 4326673 4327101 + hypothetical protein gene gene3993 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19970 PAJ_RS19975 PAJ_3619 PAJ_RS19975 4327141 4327662 - glutamine amidotransferase gene gene3994 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19975 PAJ_RS19980 PAJ_3620 PAJ_RS19980 4327809 4328444 + hypothetical protein gene gene3995 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19980 PAJ_RS19985 PAJ_3621 PAJ_RS19985 4328436 4328903 - anaerobic ribonucleoside-triphosphate reductase activating protein activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions gene gene3996 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19985 PAJ_RS19990 PAJ_3622 PAJ_RS19990 4328900 4331038 - anaerobic ribonucleoside triphosphate reductase Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates gene gene3997 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19990 PAJ_RS19995 PAJ_3623 PAJ_RS19995 4331286 4333661 + beta-N-acetylhexosaminidase gene gene3998 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS19995 PAJ_RS20000 PAJ_RS20000 PAJ_RS20000 4333753 4333998 + hypothetical protein gene gene3999 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20000 PAJ_RS20005 PAJ_3624 PAJ_RS20005 4334024 4335034 - transcriptional regulator GalR controls transcription of galETKM gene gene4000 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20005 PAJ_RS20010 PAJ_3625 PAJ_RS20010 4335222 4337495 + biotin transporter BioY gene gene4001 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20010 PAJ_RS20015 PAJ_3626 PAJ_RS20015 4337772 4339511 + cell division protein FtsI gene gene4002 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20015 PAJ_RS20020 PAJ_3627 PAJ_RS20020 4339917 4341140 + multidrug resistance protein MdtA gene gene4003 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20020 PAJ_RS20025 PAJ_3628 PAJ_RS20025 4341137 4344340 + multidrug transporter Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate gene gene4004 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20025 PAJ_RS20030 PAJ_3629 PAJ_RS20030 4344337 4347438 + multidrug transporter Part of a tripartite efflux system composed of MdtA%2C MdtB and MdtC which confers resistance against novobiocin and deoxycholate gene gene4005 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20030 PAJ_RS20035 PAJ_3630 PAJ_RS20035 4347442 4348827 + RND transporter gene gene4006 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20035 PAJ_RS20040 PAJ_3631 PAJ_RS20040 4348924 4351074 + bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-ACP synthetase Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1 gene gene4007 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20040 PAJ_RS20045 PAJ_3632 PAJ_RS20045 4351071 4352264 + lysophospholipid transporter LplT gene gene4008 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20045 PAJ_RS20050 PAJ_3633 PAJ_RS20050 4352580 4354229 + methyl-accepting chemotaxis protein II Tar gene gene4009 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20050 PAJ_RS20055 PAJ_3634 PAJ_RS20055 4354318 4354704 - reactive intermediate/imine deaminase has endoribonuclease activity on mRNA gene gene4010 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20055 PAJ_RS20060 PAJ_3635 PAJ_RS20060 4354787 4355251 - aspartate carbamoyltransferase regulatory subunit involved in the allosteric regulation of aspartate carbamoyltransferase gene gene4011 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20060 PAJ_RS20065 PAJ_3636 PAJ_RS20065 4355263 4356198 - aspartate carbamoyltransferase gene gene4012 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20065 PAJ_RS20070 PAJ_3637 PAJ_RS20070 4356444 4357451 - ornithine carbamoyltransferase catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway gene gene4013 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20070 PAJ_RS20075 PAJ_3638 PAJ_RS20075 4357615 4358037 + regulator of ribonuclease activity B gene gene4014 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20075 PAJ_RS20080 PAJ_3639 PAJ_RS20080 4358094 4358855 + tRNA-(ms[2]io[6]A)-hydroxylase gene gene4015 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20080 PAJ_RS20085 PAJ_3640 PAJ_RS20085 4358861 4359397 - N-acetyltransferase gene gene4016 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20085 PAJ_RS20090 PAJ_3641 PAJ_RS20090 4359448 4360668 + hypothetical protein gene gene4017 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20090 PAJ_RS20095 PAJ_3642 PAJ_RS20095 4360717 4363572 - valine--tRNA ligase gene gene4018 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20095 PAJ_RS20100 PAJ_3643 PAJ_RS20100 4363578 4364036 - DNA polymerase III subunit chi binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB gene gene4019 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20100 PAJ_RS20105 PAJ_3644 PAJ_RS20105 4364106 4365617 - leucyl aminopeptidase catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor gene gene4020 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20105 PAJ_RS20110 PAJ_3645 PAJ_RS20110 4365885 4366985 + LPS export ABC transporter permease LptF with LptBGC is involved in lipopolysaccharide export gene gene4021 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20110 PAJ_RS20115 PAJ_3646 PAJ_RS20115 4366985 4368061 + LPS export ABC transporter permease LptG with LptABCF is involved in the transport of lipopolysaccharides gene gene4022 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20115 PAJ_RS20120 PAJ_RS20120 PAJ_RS20120 4368215 4368565 - variant SH3 domain protein gene gene4023 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20120 PAJ_RS20125 PAJ_3647 PAJ_RS20125 4368739 4369854 - peptidase M20 gene gene4024 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20125 PAJ_RS20130 PAJ_3648 PAJ_RS20130 4369854 4370609 - hypothetical protein gene gene4025 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20130 PAJ_RS20135 PAJ_3649 PAJ_RS20135 4370622 4371701 - aryldialkylphosphatase gene gene4026 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20135 PAJ_RS20140 PAJ_3650 PAJ_RS20140 4371705 4372715 - ribose ABC transporter permease gene gene4027 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20140 PAJ_RS20145 PAJ_3651 PAJ_RS20145 4372729 4373511 - ABC transporter ATP-binding protein gene gene4028 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20145 PAJ_RS20150 PAJ_3652 PAJ_RS20150 4373852 4374874 - cytochrome-c peroxidase gene gene4029 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20150 PAJ_RS20155 PAJ_3653 PAJ_RS20155 4375200 4376150 + sugar ABC transporter substrate-binding protein gene gene4030 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20155 PAJ_RS20160 PAJ_3654 PAJ_RS20160 4376143 4377024 - ribokinase RbsK gene gene4031 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20160 PAJ_RS20165 PAJ_3655 PAJ_RS20165 4377054 4377899 + photosystem I assembly BtpA gene gene4032 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20165 PAJ_RS20170 PAJ_3656 PAJ_RS20170 4378245 4379534 - membrane protein gene gene4033 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20170 PAJ_RS20175 PAJ_3657 PAJ_RS20175 4379902 4381152 - toxin HipA gene gene4034 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20175 PAJ_RS20180 PAJ_RS20180 PAJ_RS20180 4381149 4381454 - XRE family transcriptional regulator gene gene4035 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20180 PAJ_RS20185 PAJ_3658 PAJ_RS20185 4382059 4382553 + hypothetical protein gene gene4036 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20185 PAJ_RS20190 PAJ_3659 PAJ_RS20190 4382586 4384088 - hypothetical protein gene gene4037 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20190 PAJ_RS20195 PAJ_3660 PAJ_RS20195 4384180 4385748 - ABC transporter substrate-binding protein gene gene4038 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20195 PAJ_RS20200 PAJ_3661 PAJ_RS20200 4385893 4386561 - stress protection protein MarC gene gene4039 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20200 PAJ_RS20205 PAJ_3663 PAJ_RS20205 4386574 4387209 - hypothetical protein gene gene4040 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20205 PAJ_RS20210 PAJ_3664 PAJ_RS20210 4387392 4387883 - hypothetical protein gene gene4041 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20210 PAJ_RS20215 PAJ_t0075 PAJ_RS20215 4388115 4388199 + tRNA-Leu tRNA gene4042 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20215 PAJ_RS20220 PAJ_3665 PAJ_RS20220 4388508 4388981 + hypothetical protein gene gene4043 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20220 PAJ_RS20225 PAJ_3666 PAJ_RS20225 4388981 4389649 + hypothetical protein gene gene4044 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20225 PAJ_RS20230 PAJ_RS20230 PAJ_RS20230 4389708 4390922 - restriction endonuclease gene gene4045 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20230 PAJ_RS20235 PAJ_3667 PAJ_RS20235 4390926 4393097 - restriction endonuclease gene gene4046 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20235 PAJ_RS20240 PAJ_3668 PAJ_RS20240 4393137 4396265 - hypothetical protein gene gene4047 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20240 PAJ_RS20245 PAJ_3669 PAJ_RS20245 4396262 4397587 - hypothetical protein gene gene4048 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20245 PAJ_RS20250 PAJ_3670 PAJ_RS20250 4397584 4398447 - flagellar motor protein MotB gene gene4049 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20250 PAJ_RS20255 PAJ_3671 PAJ_RS20255 4398444 4400480 - hypothetical protein gene gene4050 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20255 PAJ_RS20260 PAJ_3672 PAJ_RS20260 4400851 4403211 + restriction endonuclease subunit M gene gene4051 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20260 PAJ_RS20265 PAJ_3673 PAJ_RS20265 4403211 4404566 + type I site-specific restriction-modificationsystem%2C S subunit gene gene4052 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20265 PAJ_RS20270 PAJ_3674 PAJ_RS20270 4404563 4407811 + type I site-specific restriction-modificationsystem%2C R (restriction) subunit gene gene4053 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20270 PAJ_RS20275 PAJ_3675 PAJ_RS20275 4408152 4408655 + type IV secretion protein Rhs gene gene4054 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20275 PAJ_RS20280 PAJ_3676 PAJ_RS20280 4408661 4409038 + hypothetical protein gene gene4055 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20280 PAJ_RS20285 PAJ_RS20285 PAJ_RS20285 4409472 4409801 + membrane protein gene gene4056 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20285 PAJ_RS20290 PAJ_RS20290 PAJ_RS20290 4409875 4410270 - hypothetical protein gene gene4057 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20290 PAJ_RS20295 PAJ_RS20295 PAJ_RS20295 4410267 4410497 - hypothetical protein gene gene4058 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20295 PAJ_RS20300 PAJ_3677 PAJ_RS20300 4410642 4411502 - aminoglycoside phosphotransferase gene gene4059 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20300 PAJ_RS20305 PAJ_3678 PAJ_RS20305 4411509 4411835 - endoribonuclease SymE gene gene4060 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20305 PAJ_RS20310 PAJ_RS20310 PAJ_RS20310 4412855 4413169 + hypothetical protein gene gene4061 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20310 PAJ_RS20315 PAJ_3679 PAJ_RS20315 4413157 4413984 - hypothetical protein gene gene4062 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20315 PAJ_RS20320 PAJ_3680 PAJ_RS20320 4414414 4414866 + hypothetical protein gene gene4063 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20320 PAJ_RS20325 PAJ_3681 PAJ_RS20325 4415131 4416516 + lysine decarboxylase gene gene4064 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20325 PAJ_RS20330 PAJ_3682 PAJ_RS20330 4416549 4418045 + AMP-binding protein gene gene4065 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20330 PAJ_RS20335 PAJ_RS20335 PAJ_RS20335 4418170 4419136 + transporter frameshifted gene gene4066 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20335 PAJ_RS20340 PAJ_3684 PAJ_RS20340 4419178 4420056 - LysR family transcriptional regulator gene gene4067 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20340 PAJ_RS20345 PAJ_3685 PAJ_RS20345 4420639 4421508 - HNH endonuclease gene gene4068 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20345 PAJ_RS20350 PAJ_3686 PAJ_RS20350 4422020 4423564 - methyl-accepting chemotaxis protein gene gene4069 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20350 PAJ_RS20355 PAJ_3687 PAJ_RS20355 4424113 4424739 - hypothetical protein gene gene4070 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20355 PAJ_RS20360 PAJ_3688 PAJ_RS20360 4424975 4426261 - hexuronate transporter ExuT gene gene4071 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20360 PAJ_RS20365 PAJ_RS20365 PAJ_RS20365 4427163 4427501 + hypothetical protein gene gene4072 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20365 PAJ_RS20370 PAJ_RS20370 PAJ_RS20370 4427498 4427713 + hypothetical protein gene gene4073 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20370 PAJ_RS20375 PAJ_3690 PAJ_RS20375 4428012 4429208 + carbohydrate kinase gene gene4074 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20375 PAJ_RS20380 PAJ_3691 PAJ_RS20380 4429255 4430175 + dihydrodipicolinate synthase family protein gene gene4075 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20380 PAJ_RS20385 PAJ_3692 PAJ_RS20385 4430228 4430719 + hypothetical protein gene gene4076 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20385 PAJ_RS20390 PAJ_3693 PAJ_RS20390 4430716 4432005 + MFS transporter gene gene4077 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20390 PAJ_RS20395 PAJ_RS20395 PAJ_RS20395 4432500 4432889 + hypothetical protein gene gene4078 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20395 PAJ_RS20400 PAJ_RS20400 PAJ_RS20400 4432931 4433460 + methyltransferase frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start gene gene4079 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20400 PAJ_RS20405 PAJ_3694 PAJ_RS20405 4433514 4434236 + hypothetical protein gene gene4080 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20405 PAJ_RS20410 PAJ_3695 PAJ_RS20410 4434215 4435048 + 1-acyl-sn-glycerol-3-phosphate acyltransferase gene gene4081 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20410 PAJ_RS20415 PAJ_RS20415 PAJ_RS20415 4435029 4435286 + acyl carrier protein gene gene4082 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20415 PAJ_RS20420 PAJ_3696 PAJ_RS20420 4435299 4435550 + acyl carrier protein carries the fatty acid chain in fatty acid biosynthesis gene gene4083 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20420 PAJ_RS20425 PAJ_3697 PAJ_RS20425 4435557 4436135 + DNA gyrase subunit B gene gene4084 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20425 PAJ_RS20430 PAJ_3698 PAJ_RS20430 4436135 4437496 + AMP-dependent synthetase gene gene4085 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20430 PAJ_RS20435 PAJ_RS20435 PAJ_RS20435 4437483 4437836 + hydroxymyristoyl-ACP dehydratase gene gene4086 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20435 PAJ_RS20440 PAJ_3699 PAJ_RS20440 4437827 4439518 + acyltransferase gene gene4087 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20440 PAJ_RS20445 PAJ_RS20445 PAJ_RS20445 4439522 4439944 + 4-hydroxybenzoyl-CoA thioesterase gene gene4088 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20445 PAJ_RS20450 PAJ_3700 PAJ_RS20450 4439941 4440546 + membrane protein gene gene4089 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20450 PAJ_RS20455 PAJ_3701 PAJ_RS20455 4440515 4442833 + membrane protein gene gene4090 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20455 PAJ_RS20460 PAJ_3702 PAJ_RS20460 4442950 4443486 + hypothetical protein gene gene4091 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20460 PAJ_RS20465 PAJ_3703 PAJ_RS20465 4443488 4444657 + beta-ketoacyl-[acyl-carrier-protein] synthase II FabB%3B beta-ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene4092 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20465 PAJ_RS20470 PAJ_3704 PAJ_RS20470 4444654 4445130 + 3-hydroxy-fatty acyl-ACP dehydratase gene gene4093 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20470 PAJ_RS20475 PAJ_3705 fabG fabG 4445127 4445858 + 3-ketoacyl-ACP reductase Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis gene gene4094 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20475 PAJ_RS20480 PAJ_3706 PAJ_RS20480 4445855 4447084 + beta-ketoacyl-ACP synthase II FabB%3B beta-ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP gene gene4095 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20480 PAJ_RS20485 PAJ_3707 PAJ_RS20485 4447086 4447664 + ACP synthase gene gene4096 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20485 PAJ_RS20490 PAJ_RS20490 PAJ_RS20490 4447702 4447914 - hypothetical protein gene gene4097 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20490 PAJ_RS20495 PAJ_3708 PAJ_RS20495 4448164 4449354 + hypothetical protein gene gene4098 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20495 PAJ_RS20500 PAJ_3709 PAJ_RS20500 4449471 4449911 - acetyltransferase gene gene4099 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20500 PAJ_RS20505 PAJ_3710 PAJ_RS20505 4450376 4451056 + diguanylate phosphodiesterase gene gene4100 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20505 PAJ_RS20510 PAJ_3711 PAJ_RS20510 4451564 4452529 + glycerate dehydrogenase Catalyzes the reduction of hydroxypyruvate to form D-glycerate%2C using NADH as an electron donor gene gene4101 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20510 PAJ_RS20515 PAJ_3712 PAJ_RS20515 4452555 4453364 + aldolase YneB gene gene4102 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20515 PAJ_RS20520 PAJ_3713 PAJ_RS20520 4453394 4454434 + threonine dehydrogenase gene gene4103 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20520 PAJ_RS20525 PAJ_3714 PAJ_RS20525 4454444 4455970 + xylulose kinase gene gene4104 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20525 PAJ_RS20530 PAJ_3715 PAJ_RS20530 4456047 4457375 + D-galactonate transporter gene gene4105 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20530 PAJ_RS20535 PAJ_3716 PAJ_RS20535 4457707 4458771 - AraC family transcriptional regulator gene gene4106 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20535 PAJ_RS20540 PAJ_3717 PAJ_RS20540 4458901 4459905 - homoserine kinase gene gene4107 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20540 PAJ_RS20545 PAJ_3718 PAJ_RS20545 4460147 4461511 + ethanolamine permease gene gene4108 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20545 PAJ_RS20550 PAJ_3719 PAJ_RS20550 4461575 4462915 + aspartate aminotransferase family protein gene gene4109 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20550 PAJ_RS20555 PAJ_3720 PAJ_RS20555 4463071 4465560 - hypothetical protein gene gene4110 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20555 PAJ_RS20560 PAJ_3721 PAJ_RS20560 4465590 4466669 - glycosyhydrolase gene gene4111 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20560 PAJ_RS20565 PAJ_3722 PAJ_RS20565 4467053 4467814 - 2-deoxy-D-gluconate 3-dehydrogenase catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate gene gene4112 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20565 PAJ_RS20570 PAJ_3723 PAJ_RS20570 4467870 4468706 - 5-dehydro-4-deoxy-D-glucuronate isomerase 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase%3B catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2%2C5-hexodiulosonate gene gene4113 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20570 PAJ_RS20575 PAJ_3724 PAJ_RS20575 4469127 4469723 - hypothetical protein gene gene4114 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20575 PAJ_RS20580 PAJ_3725 PAJ_RS20580 4469733 4470692 - hypothetical protein gene gene4115 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20580 PAJ_RS20585 PAJ_3726 PAJ_RS20585 4471198 4472934 + sulfonate ABC transporter permease gene gene4116 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20585 PAJ_RS20590 PAJ_3727 PAJ_RS20590 4472945 4474282 + nitrate ABC transporter ATP-binding protein gene gene4117 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20590 PAJ_RS20595 PAJ_3728 PAJ_RS20595 4474741 4478805 + hypothetical protein gene gene4118 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20595 PAJ_RS20600 PAJ_3729 PAJ_RS20600 4479029 4480282 - D-galactonate dehydratase family member RspA gene gene4119 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20600 PAJ_RS20605 PAJ_3730 PAJ_RS20605 4480607 4481374 + gluconate 5-dehydrogenase Involved in the nonphosphorylative%2C ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate gene gene4120 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20605 PAJ_RS20610 PAJ_3731 PAJ_RS20610 4481416 4482447 + L-idonate 5-dehydrogenase NAD-binding gene gene4121 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20610 PAJ_RS20615 PAJ_3732 PAJ_RS20615 4482590 4483987 + MFS transporter gene gene4122 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20615 PAJ_RS20620 PAJ_3733 PAJ_RS20620 4484087 4484797 + GntR family transcriptional regulator gene gene4123 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20620 PAJ_RS20625 PAJ_3734 PAJ_RS20625 4485073 4485741 - hypothetical protein gene gene4124 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20625 PAJ_RS20630 PAJ_3735 PAJ_RS20630 4486215 4487357 + serine hydrolase internal stop gene gene4125 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20630 PAJ_RS20635 PAJ_3736 PAJ_RS20635 4487489 4487995 + membrane protein gene gene4126 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20635 PAJ_RS20640 PAJ_3737 PAJ_RS20640 4488142 4488849 + acetyltransferase gene gene4127 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20640 PAJ_RS20645 PAJ_RS20645 PAJ_RS20645 4488872 4489318 - hypothetical protein gene gene4128 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20645 PAJ_RS20650 PAJ_3738 PAJ_RS20650 4489557 4491848 - phosphoglycerol transferase I catalyzes the transfer of phosphoglycerol to the glucan backbone gene gene4129 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20650 PAJ_RS20655 PAJ_3739 PAJ_RS20655 4492052 4493065 - hypothetical protein gene gene4130 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20655 PAJ_RS20660 PAJ_3740 PAJ_RS20660 4493572 4494522 + hypothetical protein gene gene4131 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20660 PAJ_RS20665 PAJ_3741 PAJ_RS20665 4494519 4495073 - hypothetical protein gene gene4132 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20665 PAJ_RS20670 PAJ_3742 PAJ_RS20670 4495659 4497053 + MFS transporter gene gene4133 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20670 PAJ_RS20675 PAJ_3743 PAJ_RS20675 4497100 4498155 + transcriptional regulator gene gene4134 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20675 PAJ_RS20680 PAJ_3744 PAJ_RS20680 4498136 4499122 + hydrolase gene gene4135 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20680 PAJ_RS20685 PAJ_3745 PAJ_RS20685 4499319 4500539 + sugar transporter gene gene4136 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20685 PAJ_RS20690 PAJ_3746 PAJ_RS20690 4500536 4501000 - hypothetical protein gene gene4137 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20690 PAJ_RS20695 PAJ_3747 PAJ_RS20695 4501213 4502310 - diguanylate cyclase gene gene4138 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20695 PAJ_RS20700 PAJ_3748 PAJ_RS20700 4502563 4502799 + membrane protein gene gene4139 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20700 PAJ_RS20705 PAJ_t0076 PAJ_RS20705 4502873 4502959 - tRNA-Leu tRNA gene4140 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20705 PAJ_RS20710 PAJ_t0077 PAJ_RS20710 4502988 4503074 - tRNA-Leu tRNA gene4141 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20710 PAJ_RS20715 PAJ_t0078 PAJ_RS20715 4503105 4503191 - tRNA-Leu tRNA gene4142 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20715 PAJ_RS20720 PAJ_3749 rsmC rsmC 4503354 4504385 - 16S rRNA (guanine(1207)-N(2))-methyltransferase 16S rRNA M2G1207 methyltransferase%3B one of many enzymes that modify bases of the ribosomal RNA%3B this enzyme methylates the G at position 1207 of the small ribosomal subunit gene gene4143 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20720 PAJ_RS20725 PAJ_3750 PAJ_RS20725 4504491 4504901 + DNA polymerase III subunit psi with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB gene gene4144 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20725 PAJ_RS20730 PAJ_3751 rimI rimI 4504873 4505313 + ribosomal-protein-alanine N-acetyltransferase RimI alanine acetyltransferase that specifically acetylates ribosomal protein S18 gene gene4145 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20730 PAJ_RS20735 PAJ_3752 PAJ_RS20735 4505333 4506013 + dUMP phosphatase manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily gene gene4146 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20735 PAJ_RS20740 PAJ_3753 PAJ_RS20740 4506142 4506810 - gluconolaconase gene gene4147 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20740 PAJ_RS20745 PAJ_3754 serB serB 4506918 4507895 + phosphoserine phosphatase catalyzes the formation of serine from O-phosphoserine gene gene4148 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20745 PAJ_RS20750 PAJ_3755 PAJ_RS20750 4507909 4509291 + DNA repair protein RadA Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents gene gene4149 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20750 PAJ_RS20755 PAJ_3756 PAJ_RS20755 4509384 4510622 + trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator NadR catalyzes the formation of NAD(+) from nicotinamide ribonucleotide%3B catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside%3B also has a regulatory function gene gene4150 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20755 PAJ_RS20760 PAJ_3757 PAJ_RS20760 4510951 4511883 + sensory transducer YqeI gene gene4151 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20760 PAJ_RS20765 PAJ_RS20765 PAJ_RS20765 4511880 4512329 + hypothetical protein gene gene4152 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20765 PAJ_RS20770 PAJ_3758 PAJ_RS20770 4512572 4513126 + fimbrial protein gene gene4153 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20770 PAJ_RS20775 PAJ_3759 PAJ_RS20775 4513166 4513855 + MrkB gene gene4154 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20775 PAJ_RS20780 PAJ_3760 PAJ_RS20780 4513861 4516383 + type I deoxyribonuclease HsdR gene gene4155 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20780 PAJ_RS20785 PAJ_3761 PAJ_RS20785 4516398 4517681 + hypothetical protein gene gene4156 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20785 PAJ_RS20790 PAJ_3762 PAJ_RS20790 4517647 4518438 + multidrug DMT transporter permease gene gene4157 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20790 PAJ_RS20795 PAJ_3763 PAJ_RS20795 4518484 4519485 - NADPH:quinone reductase gene gene4158 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20795 PAJ_RS20800 PAJ_3764 PAJ_RS20800 4519581 4520477 + LysR family transcriptional regulator gene gene4159 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20800 PAJ_RS20805 PAJ_3765 PAJ_RS20805 4520514 4522181 - energy-dependent translational throttle protein EttA ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence gene gene4160 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20805 PAJ_RS20810 PAJ_3766 PAJ_RS20810 4522420 4523184 - DNA-binding transcriptional repressor DeoR gene gene4161 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20810 PAJ_RS20815 PAJ_3767 PAJ_RS20815 4523570 4524487 + ribokinase gene gene4162 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20815 PAJ_RS20820 PAJ_3768 PAJ_RS20820 4524497 4525822 + L-fucose:H+ symporter permease gene gene4163 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20820 PAJ_RS20825 PAJ_3769 PAJ_RS20825 4525819 4526832 + DUF4432 domain-containing protein gene gene4164 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20825 PAJ_RS20830 PAJ_3770 PAJ_RS20830 4527490 4529043 + cytochrome c biogenesis protein CcmH gene gene4165 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20830 PAJ_RS20835 PAJ_3771 PAJ_RS20835 4529054 4530346 + alcaligin biosynthesis protein AlcA gene gene4166 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20835 PAJ_RS20840 PAJ_3772 PAJ_RS20840 4530348 4532699 + transcriptional regulator gene gene4167 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20840 PAJ_RS20845 PAJ_3773 PAJ_RS20845 4532780 4534012 + multidrug transporter MdfA gene gene4168 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20845 PAJ_RS20850 PAJ_3774 PAJ_RS20850 4534050 4536167 - ligand-gated channel protein gene gene4169 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20850 PAJ_RS20855 PAJ_3775 PAJ_RS20855 4536476 4537174 - ABC transporter ATP-binding protein gene gene4170 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20855 PAJ_RS20860 PAJ_3776 PAJ_RS20860 4537175 4537966 - ABC transporter ATP-binding protein gene gene4171 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20860 PAJ_RS20865 PAJ_3777 PAJ_RS20865 4537959 4539035 - urea ABC transporter permease subunit UrtC gene gene4172 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20865 PAJ_RS20870 PAJ_3778 PAJ_RS20870 4539035 4540600 - urea ABC transporter permease subunit UrtB gene gene4173 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20870 PAJ_RS20875 PAJ_3779 PAJ_RS20875 4540678 4541946 - urea ABC transporter substrate-binding protein gene gene4174 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20875 PAJ_RS20880 PAJ_3780 PAJ_RS20880 4541977 4542678 - GntR family transcriptional regulator gene gene4175 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20880 PAJ_RS20885 PAJ_3781 PAJ_RS20885 4542688 4546305 - urea carboxylase gene gene4176 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20885 PAJ_RS20890 PAJ_RS20890 PAJ_RS20890 4546312 4548106 - allophanate hydrolase catalyzes the hydrolysis of allophanate%3B frameshifted gene gene4177 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20890 PAJ_RS20895 PAJ_3782 PAJ_RS20895 4548377 4550296 + murein transglycosylase catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan gene gene4178 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20895 PAJ_RS20900 PAJ_3783 PAJ_RS20900 4550341 4550661 + Trp operon repressor gene gene4179 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20900 PAJ_RS20905 PAJ_3784 yjjX yjjX 4550662 4551180 - non-canonical purine NTP phosphatase pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog gene gene4180 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20905 PAJ_RS20910 PAJ_3785 PAJ_RS20910 4551241 4551888 + phosphoglycerate mutase catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate gene gene4181 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20910 PAJ_RS20915 PAJ_3786 PAJ_RS20915 4551927 4552793 - right origin-binding protein AraC family%3B binds to the right arm of the replication origin oriC gene gene4182 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20915 PAJ_RS20920 PAJ_3787 PAJ_RS20920 4552989 4553462 + catabolite regulation protein CreA gene gene4183 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20920 PAJ_RS20925 PAJ_3788 PAJ_RS20925 4553506 4554222 - DNA-binding response regulator gene gene4184 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20925 PAJ_RS20930 PAJ_3789 PAJ_RS20930 4554827 4555525 + tRNA/rRNA methyltransferase member of the SPOUT superfamily of methyltransferases gene gene4185 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20930 PAJ_RS20935 PAJ_RS20935 PAJ_RS20935 320152 322080 + methyl-accepting chemotaxis protein gene gene4186 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20935 PAJ_RS20940 PAJ_p0001 PAJ_RS20940 475 852 - 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase subunit F gene gene4187 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20940 PAJ_RS20945 PAJ_p0002 PAJ_RS20945 849 1172 - 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase subunit E with ArnE is involved in transporting 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from the cytoplasmic face to the periplasmic face of the inner membrane gene gene4188 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20945 PAJ_RS20950 PAJ_p0003 arnT arnT 1172 2833 - 4-amino-4-deoxy-L-arabinose lipid A transferase catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A gene gene4189 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20950 PAJ_RS20955 PAJ_p0004 PAJ_RS20955 2839 3732 - 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol gene gene4190 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20955 PAJ_RS20960 PAJ_p0005 PAJ_RS20960 3729 5711 - bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase Bifunctional polymyxin resistance arnA protein%3B catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose%3B active in certain mutant strains gene gene4191 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20960 PAJ_RS20965 PAJ_p0006 PAJ_RS20965 5711 6691 - undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate gene gene4192 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20965 PAJ_RS20970 PAJ_p0007 PAJ_RS20970 6692 7828 - UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose gene gene4193 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20970 PAJ_RS20975 PAJ_p0008 PAJ_RS20975 8366 8752 + aldoketomutase gene gene4194 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20975 PAJ_RS20980 PAJ_RS20980 PAJ_RS20980 8788 9096 - hypothetical protein gene gene4195 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20980 PAJ_RS20985 PAJ_p0010 PAJ_RS20985 9276 9560 + hypothetical protein gene gene4196 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20985 PAJ_RS20990 PAJ_p0011 PAJ_RS20990 9649 10437 - MltA-interacting MipA family protein gene gene4197 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20990 PAJ_RS20995 PAJ_p0012 PAJ_RS20995 10561 11253 + DNA-binding response regulator gene gene4198 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS20995 PAJ_RS21000 PAJ_p0013 PAJ_RS21000 11250 12437 + two-component sensor histidine kinase gene gene4199 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21000 PAJ_RS21005 PAJ_p0014 PAJ_RS21005 12571 13701 + efflux transporter RND family%2C MFP subunit AcrA gene gene4200 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21005 PAJ_RS21010 PAJ_p0015 PAJ_RS21010 13698 16775 + ACR family transporter gene gene4201 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21010 PAJ_RS21015 PAJ_p0016 PAJ_RS21015 16956 18614 - methyl-accepting chemotaxis citrate transducer Tsr gene gene4202 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21015 PAJ_RS21020 PAJ_p0017 PAJ_RS21020 18947 19294 + hypothetical protein gene gene4203 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21020 PAJ_RS21025 PAJ_p0018 PAJ_RS21025 19315 20220 - membrane protein gene gene4204 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21025 PAJ_RS21030 PAJ_p0019 PAJ_RS21030 20390 21274 + AraC family transcriptional regulator gene gene4205 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21030 PAJ_RS21035 PAJ_p0020 PAJ_RS21035 21441 21722 + hypothetical protein gene gene4206 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21035 PAJ_RS21040 PAJ_p0021 PAJ_RS21040 22360 23394 + esterase gene gene4207 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21040 PAJ_RS21045 PAJ_p0022 PAJ_RS21045 23436 24896 - D-mannonate oxidoreductase gene gene4208 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21045 PAJ_RS21050 PAJ_p0023 PAJ_RS21050 25639 25833 + hypothetical protein gene gene4209 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21050 PAJ_RS21055 PAJ_p0024 PAJ_RS21055 26252 27502 - tyrosine permease tryptophan transporter of high affinity gene gene4210 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21055 PAJ_RS21060 PAJ_p0025 PAJ_RS21060 27658 29028 - tyrosine phenol-lyase gene gene4211 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21060 PAJ_RS21065 PAJ_p0026 pdxA pdxA 29772 30758 - 4-hydroxythreonine-4-phosphate dehydrogenase catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) gene gene4212 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21065 PAJ_RS21070 PAJ_p0027 PAJ_RS21070 31224 32369 + alcohol dehydrogenase gene gene4213 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21070 PAJ_RS21075 PAJ_RS21075 PAJ_RS21075 32389 33273 + dihydrodipicolinate synthase family protein gene gene4214 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21075 PAJ_RS21080 PAJ_p0029 PAJ_RS21080 33350 34771 + sodium:solute symporter gene gene4215 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21080 PAJ_RS21085 PAJ_p0030 PAJ_RS21085 34773 35930 + glycosyl hydrolase gene gene4216 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21085 PAJ_RS21090 PAJ_p0031 PAJ_RS21090 35935 36405 + hypothetical protein gene gene4217 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21090 PAJ_RS21095 PAJ_p0032 PAJ_RS21095 36407 37087 + oxidoreductase gene gene4218 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21095 PAJ_RS21100 PAJ_p0033 PAJ_RS21100 37273 37674 - cupin gene gene4219 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21100 PAJ_RS21105 PAJ_p0034 metQ metQ 37923 38721 + DL-methionine transporter substrate-binding subunit frameshifted gene gene4220 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21105 PAJ_RS21110 PAJ_p0035 PAJ_RS21110 38778 39485 - hypothetical protein gene gene4221 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21110 PAJ_RS21115 PAJ_p0036 PAJ_RS21115 39921 40355 + riboflavin synthase subunit beta gene gene4222 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21115 PAJ_RS21120 PAJ_p0037 PAJ_RS21120 40437 40910 + hypothetical protein gene gene4223 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21120 PAJ_RS21125 PAJ_RS21125 PAJ_RS21125 41144 41581 - hypothetical protein gene gene4224 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21125 PAJ_RS21130 PAJ_p0039 PAJ_RS21130 41805 42578 - acetoin reductase gene gene4225 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21130 PAJ_RS21135 PAJ_p0040 PAJ_RS21135 42603 44282 - acetolactate synthase gene gene4226 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21135 PAJ_RS21140 PAJ_p0041 PAJ_RS21140 44299 45081 - alpha-acetolactate decarboxylase gene gene4227 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21140 PAJ_RS21145 PAJ_p0042 PAJ_RS21145 45186 46079 + transcriptional regulator gene gene4228 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21145 PAJ_RS21150 PAJ_p0043 PAJ_RS21150 46610 47884 + glutamate dehydrogenase gene gene4229 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21150 PAJ_RS21155 PAJ_p0045 PAJ_RS21155 47940 49871 - chemotaxis protein internal stop gene gene4230 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21155 PAJ_RS21160 PAJ_p0046 PAJ_RS21160 50031 50369 + cupin gene gene4231 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21160 PAJ_RS21165 PAJ_p0047 PAJ_RS21165 50704 51030 - hypothetical protein gene gene4232 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21165 PAJ_RS21170 PAJ_p0048 PAJ_RS21170 51167 51961 - hypothetical protein gene gene4233 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21170 PAJ_RS21175 PAJ_p0049 PAJ_RS21175 51958 52518 - non-canonical purine NTP pyrophosphatase gene gene4234 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21175 PAJ_RS21180 PAJ_RS21180 PAJ_RS21180 52732 54945 - ferric-rhodotorulic acid transporter frameshifted gene gene4235 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21180 PAJ_RS21185 PAJ_p0052 PAJ_RS21185 56123 56518 + DNA-binding protein gene gene4236 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21185 PAJ_RS21190 PAJ_p0053 PAJ_RS21190 56580 57629 - integrase gene gene4237 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21190 PAJ_RS21195 PAJ_p0055 PAJ_RS21195 58446 58739 - hypothetical protein gene gene4238 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21195 PAJ_RS21200 PAJ_p0056 PAJ_RS21200 59365 59607 + hypothetical protein gene gene4239 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21200 PAJ_RS21205 PAJ_p0057 PAJ_RS21205 59607 60392 + type I methionyl aminopeptidase gene gene4240 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21205 PAJ_RS21210 PAJ_p0058 PAJ_RS21210 60491 61549 - histidine kinase gene gene4241 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21210 PAJ_RS21215 PAJ_p0059 PAJ_RS21215 61739 62050 - hypothetical protein gene gene4242 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21215 PAJ_RS21220 PAJ_p0060 PAJ_RS21220 62221 62907 + hypothetical protein gene gene4243 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21220 PAJ_RS21225 PAJ_p0061 PAJ_RS21225 63198 64019 - sugar-phosphatase gene gene4244 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21225 PAJ_RS21230 PAJ_p0062 PAJ_RS21230 64243 65502 + hypothetical protein gene gene4245 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21230 PAJ_RS21235 PAJ_p0063 PAJ_RS21235 65539 66297 + DeoR family transcriptional regulator gene gene4246 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21235 PAJ_RS21240 PAJ_p0064 PAJ_RS21240 66303 67310 - transcriptional regulator gene gene4247 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21240 PAJ_RS21245 PAJ_p0065 PAJ_RS21245 67623 69071 + PTS cellobiose/arbutin/salicin transporter subunit IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene4248 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21245 PAJ_RS21250 PAJ_p0066 PAJ_RS21250 69101 70531 + 6-phospho-beta-glucosidase gene gene4249 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21250 PAJ_RS21255 PAJ_p0067 PAJ_RS21255 70640 72406 - histidine kinase gene gene4250 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21255 PAJ_RS21260 PAJ_p0068 PAJ_RS21260 73210 73449 + hypothetical protein gene gene4251 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21260 PAJ_RS21265 PAJ_p0069 PAJ_RS21265 73717 74487 - DeoR family transcriptional regulator gene gene4252 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21265 PAJ_RS21270 PAJ_p0070 PAJ_RS21270 74974 76167 - diguanylate phosphodiesterase gene gene4253 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21270 PAJ_RS21275 PAJ_p0071 PAJ_RS21275 76862 78658 + histidine kinase gene gene4254 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21275 PAJ_RS21280 PAJ_p0072 PAJ_RS21280 78706 79377 - hypothetical protein gene gene4255 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21280 PAJ_RS21285 PAJ_p0073 PAJ_RS21285 79638 80153 - hypothetical protein gene gene4256 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21285 PAJ_RS21290 PAJ_p0074 PAJ_RS21290 80169 81041 - 23S rRNA pseudouridine synthase F catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA gene gene4257 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21290 PAJ_RS21295 PAJ_p0075 PAJ_RS21295 81250 83226 - lipase gene gene4258 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21295 PAJ_RS21300 PAJ_p0076 PAJ_RS21300 83516 84394 - RpiR family transcriptional regulator gene gene4259 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21300 PAJ_RS21305 PAJ_p0077 PAJ_RS21305 84895 87024 + ligand-gated channel gene gene4260 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21305 PAJ_RS21310 PAJ_p0078 PAJ_RS21310 87011 88147 + periplasmic-binding protein gene gene4261 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21310 PAJ_RS21315 PAJ_p0079 PAJ_RS21315 88203 89174 - hypothetical protein gene gene4262 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21315 PAJ_RS21320 PAJ_p0080 PAJ_RS21320 89171 89770 - mobA-related protein YgfJ gene gene4263 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21320 PAJ_RS21325 PAJ_p0081 PAJ_RS21325 89773 92067 - hypothetical protein gene gene4264 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21325 PAJ_RS21330 PAJ_p0082 PAJ_RS21330 92106 93098 - hypothetical protein gene gene4265 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21330 PAJ_RS21335 PAJ_p0083 PAJ_RS21335 93095 93583 - (2Fe-2S)-binding protein gene gene4266 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21335 PAJ_RS21340 PAJ_p0084 PAJ_RS21340 93800 94627 - membrane protein gene gene4267 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21340 PAJ_RS21345 PAJ_p0085 PAJ_RS21345 94627 95487 - membrane protein gene gene4268 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21345 PAJ_RS21350 PAJ_p0086 PAJ_RS21350 95484 96305 - manganese transporter with SitACD is involved in the transport of manganese and iron gene gene4269 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21350 PAJ_RS21355 PAJ_p0087 PAJ_RS21355 96302 97210 - iron ABC transporter substrate-binding protein gene gene4270 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21355 PAJ_RS21360 PAJ_p0088 PAJ_RS21360 97536 97826 + hypothetical protein gene gene4271 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21360 PAJ_RS21365 PAJ_p0089 PAJ_RS21365 98056 98301 + hypothetical protein gene gene4272 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21365 PAJ_RS21370 PAJ_p0090 PAJ_RS21370 98471 98758 + hypothetical protein gene gene4273 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21370 PAJ_RS21375 PAJ_p0091 PAJ_RS21375 98901 99155 + regulatory protein AriR gene gene4274 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21375 PAJ_RS21380 PAJ_p0092 PAJ_RS21380 99244 99438 - hypothetical protein gene gene4275 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21380 PAJ_RS21385 PAJ_p0093 PAJ_RS21385 99808 100536 - membrane protein gene gene4276 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21385 PAJ_RS21390 PAJ_p0094 PAJ_RS21390 100872 101204 + hypothetical protein gene gene4277 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21390 PAJ_RS21395 PAJ_p0095 PAJ_RS21395 101225 101599 + enamine deaminase RidA gene gene4278 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21395 PAJ_RS21400 PAJ_p0097 PAJ_RS21400 105728 106699 - chromosome partitioning protein ParB gene gene4279 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21400 PAJ_RS21405 PAJ_p0098 PAJ_RS21405 106707 107906 - chromosome partitioning protein ParA gene gene4280 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21405 PAJ_RS21410 PAJ_p0099 PAJ_RS21410 109728 110657 - replication protein RepA gene gene4281 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21410 PAJ_RS21415 PAJ_p0100 PAJ_RS21415 111137 112507 + succinate dehydrogenase gene gene4282 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21415 PAJ_RS21420 PAJ_p0101 PAJ_RS21420 112649 113882 - hypothetical protein frameshifted gene gene4283 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21420 PAJ_RS21425 PAJ_p0102 PAJ_RS21425 114100 115626 + ABC transporter substrate-binding protein gene gene4284 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21425 PAJ_RS21430 PAJ_p0103 PAJ_RS21430 115626 116561 + ABC transporter permease gene gene4285 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21430 PAJ_RS21435 PAJ_p0104 PAJ_RS21435 116558 117337 + ABC transporter permease gene gene4286 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21435 PAJ_RS21440 PAJ_p0105 PAJ_RS21440 117334 118767 + ABC transporter ATP-binding protein gene gene4287 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21440 PAJ_RS21445 PAJ_p0106 PAJ_RS21445 118790 119338 - DNA-binding protein gene gene4288 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21445 PAJ_RS21450 PAJ_p0107 PAJ_RS21450 119439 120104 + branched-chain amino acid ABC transporter permease gene gene4289 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21450 PAJ_RS21455 PAJ_p0108 PAJ_RS21455 120101 120421 + hypothetical protein gene gene4290 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21455 PAJ_RS21460 PAJ_p0109 PAJ_RS21460 120738 121670 + glycine oxidase ThiO gene gene4291 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21460 PAJ_RS21465 PAJ_p0110 PAJ_RS21465 121667 121864 + thiamine biosynthesis protein ThiS gene gene4292 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21465 PAJ_RS21470 PAJ_p0111 PAJ_RS21470 121867 122625 + thiazole synthase gene gene4293 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21470 PAJ_RS21475 PAJ_p0112 PAJ_RS21475 122635 123597 + thiazole biosynthesis protein ThiF gene gene4294 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21475 PAJ_RS21480 PAJ_p0113 PAJ_RS21480 123611 124078 - histone acetyltransferase gene gene4295 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21480 PAJ_RS21485 PAJ_p0114 PAJ_RS21485 124128 124730 - lysine exporter protein RhtB gene gene4296 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21485 PAJ_RS21490 PAJ_p0115 PAJ_RS21490 124784 125158 - glyoxalase gene gene4297 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21490 PAJ_RS21495 PAJ_p0116 PAJ_RS21495 125225 125638 + DUF4440 domain-containing protein internal stop gene gene4298 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21495 PAJ_RS21500 PAJ_p0117 PAJ_RS21500 125701 126114 - ASCH domain-containing protein gene gene4299 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21500 PAJ_RS21505 PAJ_p0118 PAJ_RS21505 126168 126719 - hypothetical protein gene gene4300 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21505 PAJ_RS21510 PAJ_p0119 PAJ_RS21510 127115 127657 + hypothetical protein gene gene4301 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21510 PAJ_RS21515 PAJ_p0120 PAJ_RS21515 127670 128686 + alcohol dehydrogenase gene gene4302 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21515 PAJ_RS21520 PAJ_p0121 PAJ_RS21520 128799 129326 + beta-carotene hydroxylase gene gene4303 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21520 PAJ_RS21525 PAJ_p0122 PAJ_RS21525 129265 130194 - phytoene synthase gene gene4304 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21525 PAJ_RS21530 PAJ_p0123 PAJ_RS21530 130191 131669 - phytoene dehydrogenase gene gene4305 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21530 PAJ_RS21535 PAJ_p0124 PAJ_RS21535 131681 132829 - lycopene cyclase gene gene4306 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21535 PAJ_RS21540 PAJ_p0125 PAJ_RS21540 132813 134108 - zeaxanthin glucosyl transferase CrtX gene gene4307 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21540 PAJ_RS21545 PAJ_p0126 PAJ_RS21545 134118 135026 - geranylgeranyl pyrophosphate synthetase gene gene4308 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21545 PAJ_RS21550 PAJ_p0127 PAJ_RS21550 135269 135799 - hypothetical protein gene gene4309 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21550 PAJ_RS21555 PAJ_RS21555 PAJ_RS21555 135967 136185 + hypothetical protein gene gene4310 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21555 PAJ_RS21560 PAJ_RS21560 PAJ_RS21560 136245 137983 - hypothetical protein frameshifted gene gene4311 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21560 PAJ_RS21565 PAJ_p0130 PAJ_RS21565 138047 138475 - hypothetical protein gene gene4312 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21565 PAJ_RS21570 PAJ_p0131 PAJ_RS21570 138661 139603 + hydroxyacid dehydrogenase frameshifted gene gene4313 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21570 PAJ_RS21575 PAJ_p0132 PAJ_RS21575 139605 140525 - glutaminase catalyzes the formation of glutamate from glutamine gene gene4314 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21575 PAJ_RS21580 PAJ_RS21580 PAJ_RS21580 140784 142203 + ClC family H(+)/Cl(-) exchange transporter frameshifted gene gene4315 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21580 PAJ_RS21585 PAJ_p0135 PAJ_RS21585 143283 143780 + type VI secretion system-associated protein gene gene4316 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21585 PAJ_RS21590 PAJ_p0136 PAJ_RS21590 143814 145361 + type VI secretion protein EvpB gene gene4317 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21590 PAJ_RS21595 PAJ_p0137 PAJ_RS21595 145379 146719 + type VI secretion system-associated protein gene gene4318 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21595 PAJ_RS21600 PAJ_p0138 PAJ_RS21600 146716 147405 + membrane protein gene gene4319 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21600 PAJ_RS21605 PAJ_RS21605 PAJ_RS21605 147402 149126 + membrane protein gene gene4320 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21605 PAJ_RS21610 PAJ_p0140 PAJ_RS21610 149131 149622 + hemolysin Co-regulated protein Hcp gene gene4321 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21610 PAJ_RS21615 PAJ_RS21615 PAJ_RS21615 149612 149797 - hypothetical protein gene gene4322 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21615 PAJ_RS21620 PAJ_p0141 PAJ_RS21620 149796 152456 + ClpV1 family T6SS ATPase gene gene4323 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21620 PAJ_RS21625 PAJ_p0142 PAJ_RS21625 152446 154797 + type IV secretion protein Rhs gene gene4324 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21625 PAJ_RS21630 PAJ_p0143 PAJ_RS21630 154812 157043 + hypothetical protein gene gene4325 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21630 PAJ_RS21635 PAJ_p0144 PAJ_RS21635 157047 157751 + hypothetical protein gene gene4326 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21635 PAJ_RS21640 PAJ_p0145 PAJ_RS21640 157977 158258 + hypothetical protein gene gene4327 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21640 PAJ_RS21645 PAJ_p0146 PAJ_RS21645 158401 158889 + hypothetical protein gene gene4328 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21645 PAJ_RS21650 PAJ_p0147 PAJ_RS21650 159070 160278 + hypothetical protein gene gene4329 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21650 PAJ_RS21655 PAJ_RS21655 PAJ_RS21655 160275 163761 + type VI secretion protein VasK frameshifted gene gene4330 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21655 PAJ_RS21660 PAJ_p0150 PAJ_RS21660 163758 165359 + type VI secretion-associated protein gene gene4331 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21660 PAJ_RS21665 PAJ_p0151 PAJ_RS21665 165390 166667 + hypothetical protein gene gene4332 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21665 PAJ_RS21670 PAJ_RS21670 PAJ_RS21670 167202 167402 + hypothetical protein gene gene4333 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21670 PAJ_RS21675 PAJ_p0153 PAJ_RS21675 167624 168052 + hypothetical protein gene gene4334 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21675 PAJ_RS21680 PAJ_p0154 PAJ_RS21680 168276 169550 + hypothetical protein gene gene4335 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21680 PAJ_RS21685 PAJ_p0155 PAJ_RS21685 169550 169984 + hypothetical protein gene gene4336 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21685 PAJ_RS21690 PAJ_RS21690 PAJ_RS21690 170010 170246 + hypothetical protein gene gene4337 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21690 PAJ_RS21695 PAJ_p0156 PAJ_RS21695 170526 172280 + type VI secretion protein ImpG gene gene4338 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21695 PAJ_RS21700 PAJ_p0157 PAJ_RS21700 172244 173329 + hypothetical protein gene gene4339 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21700 PAJ_RS21705 PAJ_p0158 PAJ_RS21705 173307 173852 + type VI secretion protein gene gene4340 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21705 PAJ_RS21710 PAJ_p0159 PAJ_RS21710 173852 174307 + hypothetical protein gene gene4341 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21710 PAJ_RS21715 PAJ_RS21715 PAJ_RS21715 174413 174637 + hypothetical protein gene gene4342 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21715 PAJ_RS21720 PAJ_p0160 PAJ_RS21720 174634 176025 + hypothetical protein gene gene4343 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21720 PAJ_RS21725 PAJ_RS21725 PAJ_RS21725 176520 176846 + hypothetical protein gene gene4344 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21725 PAJ_RS21730 PAJ_p0162 PAJ_RS21730 176895 177431 + phosphatidylethanolamine-binding protein gene gene4345 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21730 PAJ_RS21735 PAJ_p0163 PAJ_RS21735 177492 178968 - MFS transporter frameshifted gene gene4346 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21735 PAJ_RS21740 PAJ_p0164 PAJ_RS21740 179331 180533 - MFS transporter gene gene4347 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21740 PAJ_RS21745 PAJ_RS21745 PAJ_RS21745 180807 181367 + hypothetical protein gene gene4348 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21745 PAJ_RS21750 PAJ_RS21750 PAJ_RS21750 181389 181568 + hypothetical protein gene gene4349 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21750 PAJ_RS21755 PAJ_p0166 PAJ_RS21755 181574 182360 - cytochrome C551 frameshifted gene gene4350 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21755 PAJ_RS21760 PAJ_p0168 PAJ_RS21760 182657 183559 - LysR family transcriptional regulator gene gene4351 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21760 PAJ_RS21765 PAJ_p0169 PAJ_RS21765 183659 184723 + NAD dependent epimerase/dehydratase gene gene4352 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21765 PAJ_RS21770 PAJ_p0170 PAJ_RS21770 184811 185464 + NAD-dependent dehydratase gene gene4353 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21770 PAJ_RS21775 PAJ_p0171 PAJ_RS21775 185518 187164 - fumarate hydratase catalyzes the formation of malate from fumerate gene gene4354 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21775 PAJ_RS21780 PAJ_p0172 PAJ_RS21780 187321 188829 - ABC transporter permease involved in the transport of citrate into the cell along with the export of succinate out of the cell gene gene4355 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21780 PAJ_RS21785 PAJ_p0173 PAJ_RS21785 189420 192197 + flavocytochrome c gene gene4356 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21785 PAJ_RS21790 PAJ_p0174 PAJ_RS21790 192264 193232 + thiamine biosynthesis protein ApbE gene gene4357 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21790 PAJ_RS21795 PAJ_p0175 PAJ_RS21795 193226 193945 - transcriptional regulator response regulator in two-component regulatory system with DcuS%3B phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration gene gene4358 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21795 PAJ_RS21800 PAJ_p0176 PAJ_RS21800 193942 195531 - two-component system sensor histidine kinase DcuS C4-dicarboxylate-sensing histidine kinase%3B part of two-component regulatory system with DcuR%3B regulates anaerobic fumarate respiration gene gene4359 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21800 PAJ_RS21805 PAJ_p0177 PAJ_RS21805 195842 196786 + hypothetical protein gene gene4360 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21805 PAJ_RS21810 PAJ_p0178 PAJ_RS21810 197167 198816 + malate:quinone oxidoreductase gene gene4361 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21810 PAJ_RS21815 PAJ_p0179 PAJ_RS21815 198896 199183 - hypothetical protein gene gene4362 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21815 PAJ_RS21820 PAJ_p0180 PAJ_RS21820 199404 199874 - hypothetical protein gene gene4363 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21820 PAJ_RS21825 PAJ_p0181 PAJ_RS21825 200180 201646 - 2%2C4-diaminobutyrate decarboxylase gene gene4364 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21825 PAJ_RS21830 PAJ_p0182 PAJ_RS21830 201661 203043 - aspartate aminotransferase family protein catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde gene gene4365 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21830 PAJ_RS21835 PAJ_p0183 PAJ_RS21835 203510 204094 - hypothetical protein gene gene4366 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21835 PAJ_RS21840 PAJ_p0184 PAJ_RS21840 204189 205079 + membrane protein gene gene4367 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21840 PAJ_RS21845 PAJ_p0185 lplA lplA 205167 206183 - lipoate--protein ligase A Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins gene gene4368 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21845 PAJ_RS21850 PAJ_p0186 PAJ_RS21850 206650 207153 + hypothetical protein gene gene4369 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21850 PAJ_RS21855 PAJ_p0187 PAJ_RS21855 207178 208782 + choline dehydrogenase gene gene4370 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21855 PAJ_RS21860 PAJ_p0188 PAJ_RS21860 208775 210133 + cytochrome c gene gene4371 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21860 PAJ_RS21865 PAJ_p0189 PAJ_RS21865 210360 211940 + hypothetical protein gene gene4372 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21865 PAJ_RS21870 PAJ_p0190 PAJ_RS21870 212001 212741 - NADPH-dependent oxidoreductase gene gene4373 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21870 PAJ_RS21875 PAJ_p0191 PAJ_RS21875 213060 213692 + threonine transporter gene gene4374 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21875 PAJ_RS21880 PAJ_p0192 PAJ_RS21880 213887 214444 - N-acetyltransferase GCN5 gene gene4375 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21880 PAJ_RS21885 PAJ_p0193 PAJ_RS21885 214786 216450 + methyl-accepting chemotaxis protein I Tsr gene gene4376 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21885 PAJ_RS21890 PAJ_p0195 PAJ_RS21890 216901 217834 - hypothetical protein frameshifted gene gene4377 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21890 PAJ_RS21895 PAJ_p0196 PAJ_RS21895 217834 218421 - hypothetical protein gene gene4378 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21895 PAJ_RS21900 PAJ_p0198 PAJ_RS21900 218923 220026 + ABC transporter ATP-binding protein gene gene4379 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21900 PAJ_RS21905 PAJ_p0199 PAJ_RS21905 220052 221329 + ABC transporter substrate-binding protein gene gene4380 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21905 PAJ_RS21910 PAJ_p0200 PAJ_RS21910 221340 222251 + ABC transporter permease gene gene4381 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21910 PAJ_RS21915 PAJ_p0201 PAJ_RS21915 222248 223066 + ABC transporter permease gene gene4382 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21915 PAJ_RS21920 PAJ_p0202 PAJ_RS21920 223078 223986 + hypothetical protein gene gene4383 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21920 PAJ_RS21925 PAJ_p0203 PAJ_RS21925 224267 225145 - transcriptional regulator gene gene4384 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21925 PAJ_RS21930 PAJ_p0204 PAJ_RS21930 225246 225560 + hypothetical protein gene gene4385 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21930 PAJ_RS21935 PAJ_p0205 PAJ_RS21935 225570 225977 + decarboxylase gene gene4386 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21935 PAJ_RS21940 PAJ_p0206 PAJ_RS21940 225988 226524 + DUF4865 domain-containing protein gene gene4387 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21940 PAJ_RS21945 PAJ_p0207 PAJ_RS21945 226738 227301 + peroxiredoxin gene gene4388 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21945 PAJ_RS21950 PAJ_p0208 PAJ_RS21950 227325 228560 + thiol:disulfide interchange protein DsbD gene gene4389 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21950 PAJ_RS21955 PAJ_p0209 PAJ_RS21955 228737 229429 + racemase gene gene4390 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21955 PAJ_RS21960 PAJ_p0210 PAJ_RS21960 229465 229821 - hypothetical protein gene gene4391 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21960 PAJ_RS21965 PAJ_RS21965 PAJ_RS21965 230355 230618 + hypothetical protein gene gene4392 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21965 PAJ_RS21970 PAJ_p0211 PAJ_RS21970 230956 231189 + hypothetical protein gene gene4393 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21970 PAJ_RS21975 PAJ_p0212 PAJ_RS21975 231312 231971 - membrane protein gene gene4394 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21975 PAJ_RS21980 PAJ_p0213 PAJ_RS21980 232715 233773 + lipid kinase gene gene4395 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21980 PAJ_RS21985 PAJ_p0214 PAJ_RS21985 233798 234613 + lipid kinase gene gene4396 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21985 PAJ_RS21990 PAJ_p0215 PAJ_RS21990 234610 235392 + lauroyl acyltransferase gene gene4397 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21990 PAJ_RS21995 PAJ_p0216 PAJ_RS21995 235389 236117 + urea carboxylase gene gene4398 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS21995 PAJ_RS22000 PAJ_p0217 PAJ_RS22000 236128 236763 + urea carboxylase gene gene4399 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22000 PAJ_RS22005 PAJ_p0218 PAJ_RS22005 236875 240480 + urea carboxylase gene gene4400 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22005 PAJ_RS22010 PAJ_p0219 PAJ_RS22010 240649 241794 - 6-phosphogluconolactonase gene gene4401 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22010 PAJ_RS22015 PAJ_RS22015 PAJ_RS22015 241936 242133 + hypothetical protein gene gene4402 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22015 PAJ_RS22020 PAJ_p0221 PAJ_RS22020 243535 245664 + hypothetical protein gene gene4403 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22020 PAJ_RS22025 PAJ_p0222 PAJ_RS22025 245666 246541 + RelA/SpoT protein gene gene4404 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22025 PAJ_RS22030 PAJ_p0223 PAJ_RS22030 246949 247986 + hypothetical protein gene gene4405 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22030 PAJ_RS22035 PAJ_p0224 PAJ_RS22035 248703 250367 - methyl-accepting chemotaxis protein gene gene4406 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22035 PAJ_RS22040 PAJ_p0225 PAJ_RS22040 250649 251584 - flagellin gene gene4407 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22040 PAJ_RS22045 PAJ_p0226 PAJ_RS22045 252202 253746 + methyl-accepting chemotaxis citrate transducer Tcp gene gene4408 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22045 PAJ_RS22050 PAJ_p0227 PAJ_RS22050 253739 254068 + hypothetical protein gene gene4409 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22050 PAJ_RS22055 PAJ_p0228 glnQ glnQ 254606 255352 - arginine ABC transporter ATP-binding protein similar to ATP-binding component of ABC transporters gene gene4410 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22055 PAJ_RS22060 PAJ_p0229 PAJ_RS22060 255354 256004 - amino acid ABC transporter permease gene gene4411 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22060 PAJ_RS22065 PAJ_p0230 PAJ_RS22065 256312 257028 + polar amino acid ABC transporter substrate-binding protein internal stop gene gene4412 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22065 PAJ_RS22070 PAJ_p0231 PAJ_RS22070 257074 257679 + hypothetical protein gene gene4413 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22070 PAJ_RS22075 PAJ_p0232 PAJ_RS22075 257694 259023 + D-amino-acid oxidase frameshifted gene gene4414 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22075 PAJ_RS22080 PAJ_p0233 PAJ_RS22080 259423 260313 - protein iolH gene gene4415 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22080 PAJ_RS22085 PAJ_p0234 PAJ_RS22085 260443 261612 - oxidoreductase gene gene4416 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22085 PAJ_RS22090 PAJ_p0235 PAJ_RS22090 261624 262529 - rhizopine catabolism protein MocC gene gene4417 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22090 PAJ_RS22095 PAJ_p0236 PAJ_RS22095 262744 263766 - protein GalS gene gene4418 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22095 PAJ_RS22100 PAJ_p0237 PAJ_RS22100 264165 266223 + diguanylate cyclase frameshifted gene gene4419 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22100 PAJ_RS22105 PAJ_p0238 PAJ_RS22105 266406 267323 - LysR family transcriptional regulator gene gene4420 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22105 PAJ_RS22110 PAJ_p0239 PAJ_RS22110 267798 268622 - D-aminopeptidase gene gene4421 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22110 PAJ_RS22115 PAJ_p0240 PAJ_RS22115 268619 269662 - aminopeptidase gene gene4422 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22115 PAJ_RS22120 PAJ_p0241 PAJ_RS22120 269665 270549 - glutathione ABC transporter permease GsiD with GsiABD is involved in the transport of glutathione into the cell gene gene4423 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22120 PAJ_RS22125 PAJ_p0242 PAJ_RS22125 270546 271478 - glutathione ABC transporter permease with GsiABD is involved in the transport of glutathione into the cell gene gene4424 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22125 PAJ_RS22130 PAJ_p0243 PAJ_RS22130 271562 273103 - ABC transporter substrate-binding protein gene gene4425 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22130 PAJ_RS22135 PAJ_p0244 PAJ_RS22135 273127 274992 - glutathione ABC transporter ATP-binding protein with GsiBCD is involved in glutathione import%3B GsiA contains 2 ATP-binding domains gene gene4426 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22135 PAJ_RS22140 PAJ_p0245 PAJ_RS22140 275008 275973 - dipeptide epimerase gene gene4427 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22140 PAJ_RS22145 PAJ_p0246 PAJ_RS22145 275975 276982 - hypothetical protein gene gene4428 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22145 PAJ_RS22150 PAJ_p0247 PAJ_RS22150 277280 278626 - pyrimidine utilization transport protein G gene gene4429 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22150 PAJ_RS22155 PAJ_p0248 PAJ_RS22155 278660 279214 - pyrimidine utilization flavin reductase protein F gene gene4430 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22155 PAJ_RS22160 PAJ_p0249 PAJ_RS22160 279245 279835 - nitroreductase family protein gene gene4431 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22160 PAJ_RS22165 PAJ_p0250 PAJ_RS22165 279832 280659 - pyrimidine utilization protein D gene gene4432 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22165 PAJ_RS22170 PAJ_p0251 PAJ_RS22170 280695 281081 - aminoacrylate peracid reductase gene gene4433 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22170 PAJ_RS22175 PAJ_p0252 PAJ_RS22175 281107 281856 - pyrimidine utilization protein B gene gene4434 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22175 PAJ_RS22180 PAJ_p0253 PAJ_RS22180 281856 282947 - pyrimidine monooxygenase RutA gene gene4435 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22180 PAJ_RS22185 PAJ_p0254 PAJ_RS22185 283346 284035 + TetR family transcriptional regulator gene gene4436 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22185 PAJ_RS22190 PAJ_p0255 PAJ_RS22190 284111 284806 - hypothetical protein gene gene4437 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22190 PAJ_RS22195 PAJ_RS22195 PAJ_RS22195 284960 285184 - KTSC domain-containing protein gene gene4438 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22195 PAJ_RS22200 PAJ_p0256 PAJ_RS22200 285571 286014 + hypothetical protein gene gene4439 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22200 PAJ_RS22205 PAJ_p0257 PAJ_RS22205 286011 286478 + hypothetical protein gene gene4440 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22205 PAJ_RS22210 PAJ_p0258 PAJ_RS22210 287123 288517 + flagellar filament capping protein FliD gene gene4441 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22210 PAJ_RS22215 PAJ_p0259 PAJ_RS22215 289202 290137 + flagellin gene gene4442 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22215 PAJ_RS22220 PAJ_p0260 PAJ_RS22220 290199 290771 - hypothetical protein gene gene4443 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22220 PAJ_RS22225 PAJ_p0262 PAJ_RS22225 291132 291632 + hypothetical protein gene gene4444 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22225 PAJ_RS22230 PAJ_p0263 PAJ_RS22230 291721 292512 + MBL fold metallo-hydrolase gene gene4445 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22230 PAJ_RS22235 PAJ_p0264 PAJ_RS22235 292708 293364 - hypothetical protein gene gene4446 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22235 PAJ_RS22240 PAJ_p0265 PAJ_RS22240 293364 295610 - hypothetical protein gene gene4447 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22240 PAJ_RS22245 PAJ_RS22245 PAJ_RS22245 295700 296136 - recombinase frameshifted gene gene4448 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22245 PAJ_RS22250 PAJ_p0267 PAJ_RS22250 296955 299414 + glucoamylase precursor Cga gene gene4449 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22250 PAJ_RS22255 PAJ_p0268 PAJ_RS22255 299416 300420 + 6-phosphogluconate dehydrogenase gene gene4450 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22255 PAJ_RS22260 PAJ_p0269 PAJ_RS22260 300438 301808 + glucose-6-phosphate 1-dehydrogenase gene gene4451 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22260 PAJ_RS22265 PAJ_p0270 PAJ_RS22265 301827 302522 + hypothetical protein gene gene4452 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22265 PAJ_RS22270 PAJ_p0271 PAJ_RS22270 302937 303155 + hypothetical protein gene gene4453 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22270 PAJ_RS22275 PAJ_p0272 PAJ_RS22275 303161 303642 + hypothetical protein frameshifted gene gene4454 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22275 PAJ_RS22280 PAJ_RS22280 PAJ_RS22280 304452 305756 + divalent metal cation transporter internal stop gene gene4455 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22280 PAJ_RS22285 PAJ_p0275 PAJ_RS22285 305936 306340 - acetyltransferase gene gene4456 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22285 PAJ_RS22290 PAJ_RS22290 PAJ_RS22290 306791 307009 + hypothetical protein gene gene4457 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22290 PAJ_RS22295 PAJ_p0276 PAJ_RS22295 307022 308185 + alpha-hydroxy-acid oxidizing enzyme gene gene4458 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22295 PAJ_RS22300 PAJ_p0277 PAJ_RS22300 308554 309045 - acetyltransferase gene gene4459 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22300 PAJ_RS22305 PAJ_p0278 PAJ_RS22305 309163 317745 - beta-(1%2C2)-glucan biosynthesis protein gene gene4460 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22305 PAJ_RS22310 PAJ_p0279 PAJ_RS22310 319043 319582 - chorismate mutase gene gene4461 http://www.ncbi.nlm.nih.gov/gene/?term=PAJ_RS22310