locus-tag	class	description
DSJ_RS00010	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DSJ_RS00015	COG0592	DNA-directed DNA polymerase activity
DSJ_RS00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DSJ_RS00030	COG0561	phosphatase activity
DSJ_RS00035	COG0823	Involved in the tonB-independent uptake of proteins
DSJ_RS00040	COG5645	(Lipo)protein
DSJ_RS00060	COG3977	Valine--pyruvate aminotransferase
DSJ_RS00075	COG2723	6-phospho-beta-galactosidase activity
DSJ_RS00080	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DSJ_RS00085	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DSJ_RS00090	COG1609	Transcriptional regulator
DSJ_RS00095	COG1940	carbohydrate kinase activity
DSJ_RS00100	COG1484	DNA-dependent DNA replication
DSJ_RS00115	COG2818	Glycosylase
DSJ_RS00120	COG2885	chlorophyll binding
DSJ_RS00130	COG1609	Transcriptional regulator
DSJ_RS00140	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DSJ_RS00145	COG2244	polysaccharide biosynthetic process
DSJ_RS00150	COG2860	membrane
DSJ_RS00170	COG1758	RNA polymerase activity
DSJ_RS00175	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DSJ_RS00180	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DSJ_RS00185	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DSJ_RS00190	COG2233	PERMEase
DSJ_RS00195	COG2982	Protein involved in outer membrane biogenesis
DSJ_RS00200	COG0456	acetyltransferase
DSJ_RS00215	COG1011	Hydrolase
DSJ_RS00230	COG3852	Histidine kinase
DSJ_RS00245	COG3078	GTPase activator activity
DSJ_RS00260	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DSJ_RS00260	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DSJ_RS00265	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DSJ_RS00270	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DSJ_RS00275	COG3084	Protein conserved in bacteria
DSJ_RS00280	COG0746	molybdenum cofactor guanylyltransferase activity
DSJ_RS00285	COG1763	Mo-molybdopterin cofactor biosynthetic process
DSJ_RS00310	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DSJ_RS00330	COG0551	DNA topoisomerase type I activity
DSJ_RS00340	COG0758	DNA mediated transformation
DSJ_RS00350	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS00355	COG4372	Transposase
DSJ_RS00370	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DSJ_RS00375	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DSJ_RS00375	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DSJ_RS00380	COG0569	domain protein
DSJ_RS00385	COG1970	mechanosensitive ion channel activity
DSJ_RS00390	COG3036	rescue of stalled ribosome
DSJ_RS00400	COG0203	ribosomal protein L17
DSJ_RS00410	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DSJ_RS00415	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DSJ_RS00420	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DSJ_RS00425	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DSJ_RS00430	COG0201	protein transport
DSJ_RS00435	COG0200	Binds to the 23S rRNA
DSJ_RS00440	COG1841	ribosomal large subunit assembly
DSJ_RS00445	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DSJ_RS00450	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DSJ_RS00460	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DSJ_RS00465	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DSJ_RS00480	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DSJ_RS00495	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DSJ_RS00510	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DSJ_RS00515	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DSJ_RS00525	COG0088	Forms part of the polypeptide exit tunnel
DSJ_RS00535	COG0051	transcription antitermination factor activity, RNA binding
DSJ_RS00560	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DSJ_RS00565	COG0049	tRNA binding
DSJ_RS00570	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DSJ_RS00580	COG2923	Belongs to the DsrF TusC family
DSJ_RS00590	COG2964	Protein conserved in bacteria
DSJ_RS00595	COG0545	Peptidyl-prolyl cis-trans isomerase
DSJ_RS00600	COG2900	Belongs to the SlyX family
DSJ_RS00605	COG1047	Peptidyl-prolyl cis-trans
DSJ_RS00610	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
DSJ_RS00615	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DSJ_RS00615	COG0475	glutathione-regulated potassium exporter activity
DSJ_RS00620	COG2249	NAD(P)H dehydrogenase (quinone) activity
DSJ_RS00625	COG0488	(ABC) transporter
DSJ_RS00630	COG2175	clavaminate synthase activity
DSJ_RS00635	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DSJ_RS00645	COG4521	taurine ABC transporter
DSJ_RS00650	COG1609	Transcriptional regulator
DSJ_RS00660	COG0429	hydrolase of the alpha beta-hydrolase fold
DSJ_RS00670	COG3954	Phosphoribulokinase
DSJ_RS00675	COG1765	OsmC-like protein
DSJ_RS00690	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DSJ_RS00705	COG4372	Transposase
DSJ_RS00710	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS00790	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DSJ_RS00805	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS00810	COG4372	Transposase
DSJ_RS00880	COG1289	transmembrane transporter activity
DSJ_RS00895	COG4372	Transposase
DSJ_RS00900	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS00910	COG2184	nucleotidyltransferase activity
DSJ_RS00930	COG0738	Major facilitator superfamily
DSJ_RS00935	COG0402	S-adenosylhomocysteine deaminase activity
DSJ_RS00945	COG0546	phosphoglycolate phosphatase activity
DSJ_RS00950	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DSJ_RS00960	COG3266	domain, Protein
DSJ_RS00960	COG3266	domain, Protein
DSJ_RS00965	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
DSJ_RS00970	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
DSJ_RS00975	COG4796	Type ii and iii secretion system protein
DSJ_RS00985	COG4796	Type ii and iii secretion system protein
DSJ_RS01010	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DSJ_RS01015	COG0494	nUDIX hydrolase
DSJ_RS01030	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DSJ_RS01035	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DSJ_RS01040	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
DSJ_RS01060	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DSJ_RS01065	COG2183	response to ionizing radiation
DSJ_RS01070	COG0366	Alpha amylase catalytic
DSJ_RS01080	COG2267	carboxylic ester hydrolase activity
DSJ_RS01090	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
DSJ_RS01090	COG0316	Belongs to the HesB IscA family
DSJ_RS01100	COG0058	SHG alpha-glucan phosphorylase activity
DSJ_RS01105	COG1349	DNA-binding transcription factor activity
DSJ_RS01115	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DSJ_RS01120	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DSJ_RS01145	COG1523	belongs to the glycosyl hydrolase 13 family
DSJ_RS01160	COG2095	MarC family integral membrane protein
DSJ_RS01165	COG2610	gluconate transmembrane transporter activity
DSJ_RS01170	COG2610	gluconate transmembrane transporter activity
DSJ_RS01175	COG3265	gluconokinase activity
DSJ_RS01180	COG1609	Transcriptional regulator
DSJ_RS01185	COG1741	Belongs to the pirin family
DSJ_RS01195	COG1247	-acetyltransferase
DSJ_RS01210	COG0584	glycerophosphoryl diester phosphodiesterase
DSJ_RS01230	COG1653	transport
DSJ_RS01250	COG0559	Belongs to the binding-protein-dependent transport system permease family
DSJ_RS01255	COG0683	leucine binding
DSJ_RS01275	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DSJ_RS01280	COG2177	Part of the ABC transporter FtsEX involved in
DSJ_RS01285	COG2884	Cell division ATP-binding protein ftsE
DSJ_RS01290	COG0552	protein localization to endoplasmic reticulum
DSJ_RS01290	COG0552	protein localization to endoplasmic reticulum
DSJ_RS01295	COG0742	ribosomal rna small subunit methyltransferase
DSJ_RS01300	COG3776	membrane
DSJ_RS01310	COG3714	YhhN family
DSJ_RS01325	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
DSJ_RS01335	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DSJ_RS01340	COG3962	Belongs to the TPP enzyme family
DSJ_RS01345	COG0673	inositol 2-dehydrogenase activity
DSJ_RS01350	COG1082	Xylose isomerase domain protein TIM barrel
DSJ_RS01360	COG3718	enzyme involved in inositol metabolism
DSJ_RS01370	COG2233	PERMEase
DSJ_RS01375	COG0628	permease
DSJ_RS01380	COG2186	Transcriptional regulator
DSJ_RS01385	COG1312	Catalyzes the dehydration of D-mannonate
DSJ_RS01390	COG2200	EAL domain
DSJ_RS01405	COG0113	porphobilinogen synthase activity
DSJ_RS01415	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DSJ_RS01440	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
DSJ_RS01445	COG0747	negative chemotaxis
DSJ_RS01450	COG0601	transmembrane transport
DSJ_RS01455	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DSJ_RS01460	COG0444	Belongs to the ABC transporter superfamily
DSJ_RS01465	COG4608	Belongs to the ABC transporter superfamily
DSJ_RS01475	COG2081	HI0933 family
DSJ_RS01480	COG0306	phosphate transporter
DSJ_RS01495	COG0742	ribosomal rna small subunit methyltransferase
DSJ_RS01595	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
DSJ_RS01605	COG1234	tRNA 3'-trailer cleavage
DSJ_RS01610	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DSJ_RS01615	COG1940	carbohydrate kinase activity
DSJ_RS01625	COG3842	ATPase activity
DSJ_RS01650	COG0584	glycerophosphoryl diester phosphodiesterase
DSJ_RS01675	COG2814	Major facilitator Superfamily
DSJ_RS01680	COG0583	DNA-binding transcription factor activity
DSJ_RS01685	COG2862	Uncharacterized protein family, UPF0114
DSJ_RS01690	COG2205	protein histidine kinase activity
DSJ_RS01695	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
DSJ_RS01700	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
DSJ_RS01705	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
DSJ_RS01720	COG1132	(ABC) transporter
DSJ_RS01735	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
DSJ_RS01745	COG1063	alcohol dehydrogenase
DSJ_RS01750	COG1802	Transcriptional regulator
DSJ_RS01755	COG2271	Major facilitator Superfamily
DSJ_RS01770	COG0179	Fumarylacetoacetate (FAA) hydrolase
DSJ_RS01775	COG1971	Probably functions as a manganese efflux pump
DSJ_RS01790	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
DSJ_RS01795	COG1028	Short-chain dehydrogenase reductase Sdr
DSJ_RS01805	COG1295	ribonuclease BN
DSJ_RS01810	COG0477	Major facilitator Superfamily
DSJ_RS01835	COG0129	dihydroxy-acid dehydratase activity
DSJ_RS01845	COG3978	acetolactate synthase activity
DSJ_RS01870	COG3085	chromosome segregation
DSJ_RS01875	COG0583	DNA-binding transcription factor activity
DSJ_RS01910	COG0138	bifunctional purine biosynthesis protein purh
DSJ_RS01930	COG3068	Protein conserved in bacteria
DSJ_RS01940	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
DSJ_RS01945	COG2816	NAD+ diphosphatase activity
DSJ_RS01955	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
DSJ_RS01960	COG0352	thiamine-phosphate diphosphorylase activity
DSJ_RS01965	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DSJ_RS01970	COG5457	Domain of unknown function (DUF1127)
DSJ_RS01975	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DSJ_RS01980	COG0085	RNA polymerase activity
DSJ_RS01985	COG0222	ribosome binding
DSJ_RS01990	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DSJ_RS02000	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DSJ_RS02005	COG0250	Participates in transcription elongation, termination and antitermination
DSJ_RS02010	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DSJ_RS02040	COG1072	(Pantothenic acid kinase))
DSJ_RS02045	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
DSJ_RS02045	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
DSJ_RS02050	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DSJ_RS02055	COG4372	Transposase
DSJ_RS02060	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS02090	COG0477	Major facilitator Superfamily
DSJ_RS02095	COG1609	Transcriptional regulator
DSJ_RS02100	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DSJ_RS02110	COG1172	Belongs to the binding-protein-dependent transport system permease family
DSJ_RS02115	COG1129	ABC transporter
DSJ_RS02125	COG3111	PFAM Bacterial OB fold (BOF) protein
DSJ_RS02150	COG2425	protein containing a von Willebrand factor type A (vWA) domain
DSJ_RS02160	COG1522	sequence-specific DNA binding
DSJ_RS02165	COG0716	FMN binding
DSJ_RS02175	COG0357	Ribosomal RNA small subunit methyltransferase G
DSJ_RS02180	COG3312	ion transport
DSJ_RS02185	COG0356	it plays a direct role in the translocation of protons across the membrane
DSJ_RS02195	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DSJ_RS02200	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DSJ_RS02205	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DSJ_RS02210	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DSJ_RS02215	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DSJ_RS02230	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DSJ_RS02240	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DSJ_RS02245	COG0573	inorganic phosphate transmembrane transporter activity
DSJ_RS02250	COG0581	inorganic phosphate transmembrane transporter activity
DSJ_RS02255	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DSJ_RS02260	COG0704	Plays a role in the regulation of phosphate uptake
DSJ_RS02275	COG1070	Carbohydrate kinase
DSJ_RS02290	COG4213	ABC transporter substrate-binding protein
DSJ_RS02300	COG4214	carbohydrate transport
DSJ_RS02305	COG2207	Transcriptional regulator
DSJ_RS02305	COG1609	Transcriptional regulator
DSJ_RS02355	COG4372	Transposase
DSJ_RS02360	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS02445	COG1561	YicC-like family, N-terminal region
DSJ_RS02455	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DSJ_RS02460	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
DSJ_RS02470	COG1309	transcriptional regulator
DSJ_RS02480	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DSJ_RS02485	COG2003	Belongs to the UPF0758 family
DSJ_RS02500	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
DSJ_RS02515	COG1519	Transferase
DSJ_RS02525	COG0859	PFAM glycosyl transferase family 9
DSJ_RS02530	COG1216	Glycosyl transferase, family 2
DSJ_RS02545	COG0438	transferase activity, transferring glycosyl groups
DSJ_RS02555	COG4372	Transposase
DSJ_RS02560	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS02580	COG0156	8-amino-7-oxononanoate synthase activity
DSJ_RS02590	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DSJ_RS02600	COG0859	PFAM glycosyl transferase family 9
DSJ_RS02605	COG0859	PFAM glycosyl transferase family 9
DSJ_RS02610	COG0859	PFAM glycosyl transferase family 9
DSJ_RS02615	COG2861	carbohydrate metabolic process
DSJ_RS02620	COG4942	peptidase
DSJ_RS02625	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DSJ_RS02630	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DSJ_RS02635	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
DSJ_RS02640	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
DSJ_RS02650	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DSJ_RS02655	COG2205	protein histidine kinase activity
DSJ_RS02660	COG0745	RESPONSE REGULATOR receiver
DSJ_RS02665	COG3678	ATP-independent chaperone mediated protein folding
DSJ_RS02670	COG3729	General stress protein
DSJ_RS02680	COG0205	6-phosphofructokinase activity
DSJ_RS02685	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
DSJ_RS02695	COG0149	triose-phosphate isomerase activity
DSJ_RS02705	COG3152	Membrane
DSJ_RS02715	COG2814	Major facilitator Superfamily
DSJ_RS02720	COG1494	fructose-1,6-bisphosphatase
DSJ_RS02730	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DSJ_RS02740	COG3074	FtsZ-dependent cytokinesis
DSJ_RS02745	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
DSJ_RS02755	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
DSJ_RS02760	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DSJ_RS02765	COG1609	Transcriptional regulator
DSJ_RS02770	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DSJ_RS02775	COG0254	rRNA binding
DSJ_RS02780	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
DSJ_RS02785	COG0626	cystathionine gamma-synthase activity
DSJ_RS02790	COG0460	homoserine dehydrogenase
DSJ_RS02790	COG0527	aspartate kinase activity
DSJ_RS02795	COG4372	Transposase
DSJ_RS02800	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS02810	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
DSJ_RS02815	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DSJ_RS02825	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
DSJ_RS02830	COG0137	argininosuccinate synthase activity
DSJ_RS02835	COG0165	Argininosuccinate lyase
DSJ_RS02840	COG0583	DNA-binding transcription factor activity
DSJ_RS02845	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DSJ_RS02920	COG4372	Transposase
DSJ_RS02925	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS02950	COG0629	single-stranded DNA binding
DSJ_RS02955	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DSJ_RS02960	COG1064	alcohol dehydrogenase
DSJ_RS02965	COG2315	Protein conserved in bacteria
DSJ_RS02990	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DSJ_RS03000	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
DSJ_RS03005	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DSJ_RS03010	COG2224	Isocitrate lyase
DSJ_RS03055	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DSJ_RS03085	COG0527	aspartate kinase activity
DSJ_RS03110	COG3223	Belongs to the PsiE family
DSJ_RS03130	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DSJ_RS03135	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DSJ_RS03140	COG0534	Mate efflux family protein
DSJ_RS03150	COG0735	belongs to the Fur family
DSJ_RS03160	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DSJ_RS03180	COG1522	sequence-specific DNA binding
DSJ_RS03190	COG1448	Aminotransferase
DSJ_RS03210	COG2207	Transcriptional regulator
DSJ_RS03215	COG0789	Transcriptional regulator
DSJ_RS03225	COG2252	PERMEase
DSJ_RS03235	COG4372	Transposase
DSJ_RS03240	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS03250	COG0025	NhaP-type Na H and K H
DSJ_RS03255	COG0583	DNA-binding transcription factor activity
DSJ_RS03265	COG1346	cytolysis
DSJ_RS03275	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DSJ_RS03280	COG3162	membrane
DSJ_RS03290	COG1301	dicarboxylic acid transport
DSJ_RS03295	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
DSJ_RS03300	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DSJ_RS03300	COG1263	PTS System
DSJ_RS03315	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
DSJ_RS03335	COG2271	Major facilitator Superfamily
DSJ_RS03340	COG0840	transmembrane signaling receptor activity
DSJ_RS03345	COG0840	transmembrane signaling receptor activity
DSJ_RS03355	COG4372	Transposase
DSJ_RS03360	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS03375	COG1216	Glycosyl transferase, family 2
DSJ_RS03380	COG1216	Glycosyl transferase, family 2
DSJ_RS03385	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
DSJ_RS03390	COG1918	ferrous iron import across plasma membrane
DSJ_RS03425	COG3693	PFAM glycoside hydrolase, family 10
DSJ_RS03430	COG0667	Aldo Keto reductase
DSJ_RS03445	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DSJ_RS03455	COG1414	Transcriptional regulator
DSJ_RS03460	COG1129	ABC transporter
DSJ_RS03465	COG1172	Belongs to the binding-protein-dependent transport system permease family
DSJ_RS03485	COG2731	YhcH YjgK YiaL family protein
DSJ_RS03495	COG1070	Carbohydrate kinase
DSJ_RS03500	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
DSJ_RS03505	COG3623	hexulose-6-phosphate isomerase
DSJ_RS03510	COG0235	Class ii aldolase
DSJ_RS03570	COG3479	Phenolic acid decarboxylase
DSJ_RS03610	COG2223	nitrite transmembrane transporter activity
DSJ_RS03625	COG0625	glutathione transferase activity
DSJ_RS03635	COG0840	transmembrane signaling receptor activity
DSJ_RS03645	COG0473	3-isopropylmalate dehydrogenase activity
DSJ_RS03655	COG0395	ABC-type sugar transport system, permease component
DSJ_RS03660	COG1175	transmembrane transport
DSJ_RS03685	COG1940	carbohydrate kinase activity
DSJ_RS03690	COG2971	BadF BadG BcrA BcrD
DSJ_RS03705	COG4993	Dehydrogenase
DSJ_RS03710	COG2814	Major facilitator Superfamily
DSJ_RS03720	COG4977	sequence-specific DNA binding
DSJ_RS03730	COG0642	Histidine kinase
DSJ_RS03735	COG3248	Nucleoside-binding outer membrane protein
DSJ_RS03750	COG1733	regulation of RNA biosynthetic process
DSJ_RS03775	COG0402	S-adenosylhomocysteine deaminase activity
DSJ_RS03785	COG4372	Transposase
DSJ_RS03790	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS03800	COG0583	DNA-binding transcription factor activity
DSJ_RS03805	COG0667	Aldo Keto reductase
DSJ_RS03810	COG2249	NAD(P)H dehydrogenase (quinone) activity
DSJ_RS03820	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
DSJ_RS03830	COG1309	transcriptional regulator
DSJ_RS03840	COG1324	tolerance protein
DSJ_RS03845	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DSJ_RS03855	COG3030	protein affecting phage T7 exclusion by the F plasmid
DSJ_RS03860	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DSJ_RS03875	COG1509	lysine 2,3-aminomutase activity
DSJ_RS03880	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DSJ_RS03890	COG5510	response to toxic substance
DSJ_RS03900	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
DSJ_RS03905	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DSJ_RS03910	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DSJ_RS03915	COG3105	Protein conserved in bacteria
DSJ_RS03920	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
DSJ_RS03925	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DSJ_RS03930	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
DSJ_RS03935	COG0625	glutathione transferase activity
DSJ_RS03940	COG2969	positive regulation of protein catabolic process
DSJ_RS03945	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
DSJ_RS03950	COG0069	glutamate synthase activity
DSJ_RS03950	COG0070	glutamate synthase
DSJ_RS03950	COG0067	glutamate synthase
DSJ_RS03955	COG0784	Response regulator, receiver
DSJ_RS03955	COG5002	protein histidine kinase activity
DSJ_RS03955	COG2198	Histidine kinase
DSJ_RS03965	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DSJ_RS03970	COG1660	Displays ATPase and GTPase activities
DSJ_RS03980	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DSJ_RS03985	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
DSJ_RS03990	COG1137	ATPase activity
DSJ_RS03995	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
DSJ_RS04000	COG3117	lipopolysaccharide transmembrane transporter activity
DSJ_RS04005	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
DSJ_RS04010	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
DSJ_RS04010	COG0517	IMP dehydrogenase activity
DSJ_RS04015	COG0530	calcium, potassium:sodium antiporter activity
DSJ_RS04020	COG1127	ABC transporter
DSJ_RS04025	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DSJ_RS04030	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DSJ_RS04035	COG2854	intermembrane phospholipid transfer
DSJ_RS04040	COG3113	response to antibiotic
DSJ_RS04045	COG5007	Belongs to the BolA IbaG family
DSJ_RS04055	COG3423	Transcriptional regulator
DSJ_RS04060	COG0142	geranyltranstransferase activity
DSJ_RS04065	COG0261	This protein binds to 23S rRNA in the presence of protein L20
DSJ_RS04075	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DSJ_RS04080	COG2027	D-alanyl-D-alanine carboxypeptidase
DSJ_RS04090	COG1534	Rna-binding protein
DSJ_RS04095	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
DSJ_RS04105	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DSJ_RS04110	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DSJ_RS04115	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DSJ_RS04130	COG0779	Required for maturation of 30S ribosomal subunits
DSJ_RS04135	COG0195	Participates in both transcription termination and antitermination
DSJ_RS04145	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DSJ_RS04150	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DSJ_RS04155	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DSJ_RS04160	COG1185	polyribonucleotide nucleotidyltransferase activity
DSJ_RS04170	COG0513	Belongs to the DEAD box helicase family
DSJ_RS04175	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DSJ_RS04180	COG0826	peptidase U32
DSJ_RS04185	COG0826	peptidase U32
DSJ_RS04190	COG3154	lipid carrier protein
DSJ_RS04195	COG3153	acetyltransferase
DSJ_RS04205	COG3787	Belongs to the UPF0306 family
DSJ_RS04210	COG0693	protein deglycase activity
DSJ_RS04215	COG0702	epimerase
DSJ_RS04220	COG0602	queuosine metabolic process
DSJ_RS04225	COG1328	CTP reductase activity
DSJ_RS04230	COG3525	Glycosyl hydrolase, family 20, catalytic domain
DSJ_RS04240	COG1609	Transcriptional regulator
DSJ_RS04250	COG0768	penicillin binding
DSJ_RS04285	COG0251	oxidation-reduction process
DSJ_RS04290	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
DSJ_RS04295	COG0540	Belongs to the ATCase OTCase family
DSJ_RS04300	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DSJ_RS04305	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
DSJ_RS04320	COG0525	valine-tRNA ligase activity
DSJ_RS04325	COG2927	DNA polymerase III (CHI subunit)
DSJ_RS04330	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
DSJ_RS04335	COG0795	lipopolysaccharide-transporting ATPase activity
DSJ_RS04340	COG0795	lipopolysaccharide-transporting ATPase activity
DSJ_RS04365	COG1172	Belongs to the binding-protein-dependent transport system permease family
DSJ_RS04370	COG1129	ABC transporter
DSJ_RS04375	COG1609	Transcriptional regulator
DSJ_RS04395	COG2733	membrane
DSJ_RS04410	COG4533	DNA binding
DSJ_RS04435	COG0582	viral genome integration into host DNA
DSJ_RS04460	COG0477	Major facilitator Superfamily
DSJ_RS04465	COG1609	Transcriptional regulator
DSJ_RS04475	COG2814	Major facilitator Superfamily
DSJ_RS04480	COG0442	prolyl-tRNA aminoacylation
DSJ_RS04485	COG3706	GGDEF domain
DSJ_RS04515	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
DSJ_RS04520	COG0456	acetyltransferase
DSJ_RS04525	COG1011	Hydrolase
DSJ_RS04530	COG3726	membrane protein affecting hemolysin expression
DSJ_RS04535	COG0560	Phosphoserine phosphatase
DSJ_RS04570	COG3121	Chaperone
DSJ_RS04580	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS04585	COG4372	Transposase
DSJ_RS04595	COG4372	Transposase
DSJ_RS04600	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS04615	COG0741	lytic transglycosylase activity
DSJ_RS04625	COG1194	a g-specific adenine glycosylase
DSJ_RS04630	COG2211	Major facilitator Superfamily
DSJ_RS04635	COG1486	melibiose metabolic process
DSJ_RS04640	COG2169	Transcriptional regulator
DSJ_RS04650	COG3171	Protein conserved in bacteria
DSJ_RS04670	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DSJ_RS04675	COG2188	Transcriptional regulator
DSJ_RS04680	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DSJ_RS04685	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DSJ_RS04690	COG0762	integral membrane protein
DSJ_RS04695	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DSJ_RS04700	COG2805	Type II/IV secretion system protein
DSJ_RS04710	COG1678	Uncharacterized ACR, COG1678
DSJ_RS04720	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DSJ_RS04725	COG2356	endonuclease I
DSJ_RS04735	COG0840	transmembrane signaling receptor activity
DSJ_RS04740	COG2814	Major facilitator Superfamily
DSJ_RS04755	COG1166	arginine decarboxylase activity
DSJ_RS04765	COG0501	Belongs to the peptidase M48B family
DSJ_RS04770	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DSJ_RS04775	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DSJ_RS04780	COG0126	phosphoglycerate kinase activity
DSJ_RS04785	COG0191	fructose-bisphosphate aldolase activity
DSJ_RS04790	COG0668	transmembrane transport
DSJ_RS04795	COG1279	arginine transmembrane transporter activity
DSJ_RS04800	COG2968	Membrane
DSJ_RS04810	COG0583	DNA-binding transcription factor activity
DSJ_RS04820	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DSJ_RS04825	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DSJ_RS04835	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
DSJ_RS04845	COG0006	proline dipeptidase activity
DSJ_RS04850	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DSJ_RS04855	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DSJ_RS04860	COG0404	The glycine cleavage system catalyzes the degradation of glycine
DSJ_RS04875	COG1028	Short-chain dehydrogenase reductase Sdr
DSJ_RS04880	COG2723	6-phospho-beta-galactosidase activity
DSJ_RS04885	COG1737	Transcriptional regulator
DSJ_RS04890	COG1272	protein, Hemolysin III
DSJ_RS04895	COG0354	folic acid binding
DSJ_RS04900	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
DSJ_RS04910	COG0716	FMN binding
DSJ_RS04915	COG4974	Belongs to the 'phage' integrase family
DSJ_RS04920	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DSJ_RS04935	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
DSJ_RS04945	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS04950	COG4372	Transposase
DSJ_RS04965	COG2814	Major facilitator Superfamily
DSJ_RS04970	COG0583	DNA-binding transcription factor activity
DSJ_RS04980	COG0667	Aldo Keto reductase
DSJ_RS04990	COG0861	Integral membrane protein TerC family
DSJ_RS04995	COG3066	DNA modification
DSJ_RS05000	COG1051	belongs to the nudix hydrolase family
DSJ_RS05010	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DSJ_RS05015	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DSJ_RS05040	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
DSJ_RS05050	COG1074	ATP-dependent DNA helicase activity
DSJ_RS05055	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DSJ_RS05060	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
DSJ_RS05060	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
DSJ_RS05065	COG0860	N-Acetylmuramoyl-L-alanine amidase
DSJ_RS05085	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
DSJ_RS05090	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DSJ_RS05095	COG2166	iron-sulfur cluster assembly
DSJ_RS05100	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DSJ_RS05110	COG0583	DNA-binding transcription factor activity
DSJ_RS05120	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
DSJ_RS05130	COG1611	Belongs to the LOG family
DSJ_RS05135	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
DSJ_RS05135	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
DSJ_RS05145	COG3098	single-species biofilm formation
DSJ_RS05150	COG0564	pseudouridine synthase activity
DSJ_RS05155	COG0716	FMN binding
DSJ_RS05160	COG2721	sulfolactate sulfo-lyase activity
DSJ_RS05165	COG2271	Major facilitator Superfamily
DSJ_RS05170	COG4948	Mandelate Racemase Muconate Lactonizing
DSJ_RS05180	COG2084	Dehydrogenase
DSJ_RS05185	COG1929	Belongs to the glycerate kinase type-1 family
DSJ_RS05195	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DSJ_RS05200	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DSJ_RS05205	COG3956	TIGRFAM MazG family protein
DSJ_RS05210	COG0504	CTP synthase activity
DSJ_RS05215	COG0148	phosphopyruvate hydratase activity
DSJ_RS05230	COG0602	queuosine metabolic process
DSJ_RS05240	COG0720	synthase
DSJ_RS05255	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DSJ_RS05270	COG1126	abc transporter atp-binding protein
DSJ_RS05280	COG1126	abc transporter atp-binding protein
DSJ_RS05285	COG0765	amino acid transport
DSJ_RS05290	COG0765	amino acid transport
DSJ_RS05295	COG4372	Transposase
DSJ_RS05300	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS05310	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DSJ_RS05330	COG2234	aminopeptidase activity
DSJ_RS05335	COG1648	precorrin-2 dehydrogenase activity
DSJ_RS05335	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DSJ_RS05345	COG2895	sulfate adenylyltransferase (ATP) activity
DSJ_RS05360	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
DSJ_RS05375	COG0585	pseudouridine synthase activity
DSJ_RS05380	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
DSJ_RS05395	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DSJ_RS05410	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DSJ_RS05415	COG2951	lytic endotransglycosylase activity
DSJ_RS05420	COG2824	Alkylphosphonate utilization operon protein PhnA
DSJ_RS05435	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DSJ_RS05450	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
DSJ_RS05475	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DSJ_RS05480	COG1238	metal cluster binding
DSJ_RS05485	COG2918	glutathione biosynthetic process
DSJ_RS05490	COG1854	S-ribosylhomocysteine lyase activity
DSJ_RS05495	COG4536	flavin adenine dinucleotide binding
DSJ_RS05500	COG4137	Cytochrome C assembly protein
DSJ_RS05505	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DSJ_RS05510	COG0228	four-way junction DNA binding
DSJ_RS05540	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DSJ_RS05545	COG1605	Chorismate mutase
DSJ_RS05545	COG0287	Prephenate dehydrogenase
DSJ_RS05550	COG1605	Chorismate mutase
DSJ_RS05550	COG0077	Prephenate dehydratase
DSJ_RS05555	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DSJ_RS05560	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DSJ_RS05565	COG0564	pseudouridine synthase activity
DSJ_RS05575	COG0542	response to heat
DSJ_RS05615	COG0583	DNA-binding transcription factor activity
DSJ_RS05650	COG3723	Recombinational DNA repair protein, rece pathway
DSJ_RS05720	COG0582	viral genome integration into host DNA
DSJ_RS05725	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
DSJ_RS05735	COG0483	inositol monophosphate 1-phosphatase activity
DSJ_RS05750	COG1114	Component of the transport system for branched-chain amino acids
DSJ_RS05755	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DSJ_RS05765	COG5002	protein histidine kinase activity
DSJ_RS05770	COG0745	RESPONSE REGULATOR receiver
DSJ_RS05775	COG0420	3'-5' exonuclease activity
DSJ_RS05780	COG0419	ATPase involved in DNA repair
DSJ_RS05790	COG1940	carbohydrate kinase activity
DSJ_RS05795	COG2974	May be involved in recombination
DSJ_RS05800	COG3123	guanosine phosphorylase activity
DSJ_RS05810	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
DSJ_RS05815	COG3416	Protein conserved in bacteria
DSJ_RS05820	COG1671	Belongs to the UPF0178 family
DSJ_RS05825	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DSJ_RS05845	COG4372	Transposase
DSJ_RS05850	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS05870	COG2271	Major facilitator Superfamily
DSJ_RS05880	COG1528	Iron-storage protein
DSJ_RS05890	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
DSJ_RS05895	COG2823	Periplasmic or secreted lipoprotein
DSJ_RS05915	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS05920	COG4372	Transposase
DSJ_RS05945	COG3344	reverse transcriptase
DSJ_RS05970	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
DSJ_RS05990	COG1802	Transcriptional regulator
DSJ_RS05995	COG0439	Biotin carboxylase
DSJ_RS06005	COG0741	lytic transglycosylase activity
DSJ_RS06010	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
DSJ_RS06015	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
DSJ_RS06020	COG0406	alpha-ribazole phosphatase activity
DSJ_RS06025	COG3708	Transcriptional regulator
DSJ_RS06025	COG2207	Transcriptional regulator
DSJ_RS06030	COG4372	Transposase
DSJ_RS06035	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS06045	COG3045	CreA protein
DSJ_RS06050	COG0745	RESPONSE REGULATOR receiver
DSJ_RS06055	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
DSJ_RS06065	COG0527	aspartate kinase activity
DSJ_RS06065	COG0460	homoserine dehydrogenase
DSJ_RS06070	COG0083	homoserine kinase activity
DSJ_RS06080	COG3022	response to hydroperoxide
DSJ_RS06085	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DSJ_RS06090	COG0521	Mo-molybdopterin cofactor biosynthetic process
DSJ_RS06105	COG0484	heat shock protein binding
DSJ_RS06115	COG0268	Binds directly to 16S ribosomal RNA
DSJ_RS06125	COG0196	riboflavin kinase activity
DSJ_RS06130	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DSJ_RS06135	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DSJ_RS06140	COG1047	Peptidyl-prolyl cis-trans
DSJ_RS06150	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
DSJ_RS06155	COG0505	Belongs to the CarA family
DSJ_RS06160	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
DSJ_RS06175	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
DSJ_RS06185	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
DSJ_RS06190	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
DSJ_RS06195	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DSJ_RS06200	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
DSJ_RS06205	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
DSJ_RS06210	COG0564	pseudouridine synthase activity
DSJ_RS06215	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
DSJ_RS06220	COG0417	DNA replication proofreading
DSJ_RS06225	COG0586	Pfam SNARE associated Golgi protein
DSJ_RS06235	COG1178	ABC-type Fe3 transport system permease component
DSJ_RS06240	COG4143	(ABC) transporter
DSJ_RS06250	COG2814	Major facilitator Superfamily
DSJ_RS06260	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
DSJ_RS06265	COG0473	3-isopropylmalate dehydrogenase activity
DSJ_RS06270	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DSJ_RS06275	COG0028	Belongs to the TPP enzyme family
DSJ_RS06290	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS06295	COG4372	Transposase
DSJ_RS06310	COG2001	Belongs to the MraZ family
DSJ_RS06325	COG0768	penicillin binding
DSJ_RS06335	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DSJ_RS06345	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DSJ_RS06350	COG0772	Belongs to the SEDS family
DSJ_RS06365	COG1181	Belongs to the D-alanine--D-alanine ligase family
DSJ_RS06375	COG0849	cell division
DSJ_RS06380	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DSJ_RS06400	COG0494	nUDIX hydrolase
DSJ_RS06415	COG0237	dephospho-CoA kinase activity
DSJ_RS06420	COG0516	GMP reductase activity
DSJ_RS06425	COG1459	type II secretion system
DSJ_RS06430	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DSJ_RS06435	COG4969	Belongs to the N-Me-Phe pilin family
DSJ_RS06450	COG3023	N-Acetylmuramoyl-L-alanine amidase
DSJ_RS06455	COG3725	Membrane protein required for beta-lactamase induction
DSJ_RS06460	COG3940	Belongs to the glycosyl hydrolase 43 family
DSJ_RS06465	COG2211	Major facilitator Superfamily
DSJ_RS06470	COG1113	amino acid transport
DSJ_RS06475	COG2186	Transcriptional regulator
DSJ_RS06480	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
DSJ_RS06485	COG0508	dehydrogenase complex catalyzes the overall conversion of
DSJ_RS06490	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DSJ_RS06495	COG0583	DNA-binding transcription factor activity
DSJ_RS06500	COG0667	Aldo Keto reductase
DSJ_RS06510	COG3112	Uncharacterised protein family (UPF0231)
DSJ_RS06525	COG0840	transmembrane signaling receptor activity
DSJ_RS06545	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS06550	COG4372	Transposase
DSJ_RS06560	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
DSJ_RS06580	COG2132	Multicopper oxidase
DSJ_RS06595	COG0288	reversible hydration of carbon dioxide
DSJ_RS06600	COG1131	(ABC) transporter
DSJ_RS06605	COG0842	Transport permease protein
DSJ_RS06610	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
DSJ_RS06615	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
DSJ_RS06625	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DSJ_RS06630	COG0617	tRNA 3'-terminal CCA addition
DSJ_RS06640	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DSJ_RS06645	COG1489	DNA binding
DSJ_RS06650	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
DSJ_RS06655	COG1643	Atp-dependent helicase
DSJ_RS06660	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DSJ_RS06665	COG4774	siderophore transport
DSJ_RS06670	COG1120	ATPase activity
DSJ_RS06675	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DSJ_RS06690	COG0316	Belongs to the HesB IscA family
DSJ_RS06700	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DSJ_RS06705	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DSJ_RS06710	COG0232	Belongs to the dGTPase family. Type 2 subfamily
DSJ_RS06715	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DSJ_RS06720	COG3835	regulator
DSJ_RS06735	COG2171	N-acyltransferase activity
DSJ_RS06740	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
DSJ_RS06760	COG0528	UMP kinase activity
DSJ_RS06765	COG0233	cytoplasmic translational termination
DSJ_RS06770	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
DSJ_RS06775	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DSJ_RS06780	COG0575	Belongs to the CDS family
DSJ_RS06790	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DSJ_RS06805	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DSJ_RS06815	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
DSJ_RS06820	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DSJ_RS06835	COG1982	Orn Lys Arg decarboxylase major
DSJ_RS06840	COG0346	lactoylglutathione lyase activity
DSJ_RS06845	COG0037	tRNA processing
DSJ_RS06855	COG4568	rho-dependent transcription termination
DSJ_RS06865	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DSJ_RS06870	COG0442	prolyl-tRNA aminoacylation
DSJ_RS06875	COG1720	tRNA m6t6A37 methyltransferase activity
DSJ_RS06890	COG2011	ABC-type metal ion transport system permease component
DSJ_RS06895	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DSJ_RS06900	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DSJ_RS06925	COG4372	Transposase
DSJ_RS06930	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS06950	COG0477	Major facilitator Superfamily
DSJ_RS06955	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DSJ_RS06960	COG1042	CoA-binding domain protein
DSJ_RS06960	COG0045	succinate-CoA ligase (ADP-forming) activity
DSJ_RS06960	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DSJ_RS06965	COG3148	PFAM DTW domain containing protein
DSJ_RS06975	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DSJ_RS06980	COG1733	regulation of RNA biosynthetic process
DSJ_RS06985	COG1064	alcohol dehydrogenase
DSJ_RS06990	COG2814	Major facilitator Superfamily
DSJ_RS06995	COG1566	PFAM secretion protein HlyD family protein
DSJ_RS07000	COG1846	Transcriptional regulator
DSJ_RS07005	COG2814	Major facilitator Superfamily
DSJ_RS07010	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DSJ_RS07020	COG1780	Probably involved in ribonucleotide reductase function
DSJ_RS07030	COG4575	ribosome binding
DSJ_RS07040	COG0833	amino acid
DSJ_RS07045	COG2040	homocysteine
DSJ_RS07055	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DSJ_RS07065	COG0444	Belongs to the ABC transporter superfamily
DSJ_RS07070	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DSJ_RS07075	COG0601	transmembrane transport
DSJ_RS07080	COG0747	negative chemotaxis
DSJ_RS07105	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS07110	COG4372	Transposase
DSJ_RS07120	COG1120	ATPase activity
DSJ_RS07125	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DSJ_RS07135	COG0582	viral genome integration into host DNA
DSJ_RS07150	COG2867	negative regulation of translational initiation
DSJ_RS07160	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DSJ_RS07170	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DSJ_RS07175	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DSJ_RS07180	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
DSJ_RS07185	COG0513	Belongs to the DEAD box helicase family
DSJ_RS07195	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DSJ_RS07210	COG3026	antisigma factor binding
DSJ_RS07215	COG3086	response to oxidative stress
DSJ_RS07230	COG0571	ribonuclease III activity
DSJ_RS07240	COG1381	Involved in DNA repair and RecF pathway recombination
DSJ_RS07245	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
DSJ_RS07250	COG0736	holo-[acyl-carrier-protein] synthase activity
DSJ_RS07255	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DSJ_RS07320	COG4372	Transposase
DSJ_RS07325	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS07405	COG0739	heme binding
DSJ_RS07405	COG1196	nuclear chromosome segregation
DSJ_RS07405	COG0741	lytic transglycosylase activity
DSJ_RS07425	COG4372	Transposase
DSJ_RS07430	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS07455	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS07485	COG1737	Transcriptional regulator
DSJ_RS07490	COG0560	Phosphoserine phosphatase
DSJ_RS07500	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
DSJ_RS07505	COG0047	phosphoribosylformylglycinamidine synthase activity
DSJ_RS07505	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DSJ_RS07515	COG2205	protein histidine kinase activity
DSJ_RS07520	COG3170	Tfp pilus assembly protein FimV
DSJ_RS07525	COG2204	response regulator
DSJ_RS07530	COG0347	Belongs to the P(II) protein family
DSJ_RS07545	COG1017	nitric oxide dioxygenase activity
DSJ_RS07545	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DSJ_RS07550	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DSJ_RS07555	COG2814	Major facilitator Superfamily
DSJ_RS07560	COG3711	transcriptional antiterminator
DSJ_RS07570	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
DSJ_RS07580	COG0483	inositol monophosphate 1-phosphatase activity
DSJ_RS07590	COG1959	2 iron, 2 sulfur cluster binding
DSJ_RS07600	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
DSJ_RS07610	COG2897	thiosulfate sulfurtransferase activity
DSJ_RS07620	COG4953	penicillin-binding protein 1C
DSJ_RS07625	COG0105	UTP biosynthetic process
DSJ_RS07630	COG0820	rRNA (adenine-C2-)-methyltransferase activity
DSJ_RS07640	COG1426	Protein conserved in bacteria
DSJ_RS07650	COG0124	histidyl-tRNA synthetase
DSJ_RS07655	COG2976	Protein conserved in bacteria
DSJ_RS07660	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DSJ_RS07670	COG4993	Dehydrogenase
DSJ_RS07685	COG1570	exodeoxyribonuclease VII activity
DSJ_RS07690	COG0516	GMP reductase activity
DSJ_RS07690	COG0517	IMP dehydrogenase activity
DSJ_RS07740	COG2197	response regulator
DSJ_RS07750	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS07755	COG4372	Transposase
DSJ_RS07760	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DSJ_RS07770	COG1393	Belongs to the ArsC family
DSJ_RS07775	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DSJ_RS07785	COG0400	carboxylic ester hydrolase activity
DSJ_RS07790	COG1444	tRNA N-acetyltransferase activity
DSJ_RS07795	COG2321	neutral zinc metallopeptidase
DSJ_RS07800	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
DSJ_RS07805	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
DSJ_RS07810	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DSJ_RS07815	COG2716	regulation of RNA biosynthetic process
DSJ_RS07820	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DSJ_RS07825	COG0628	permease
DSJ_RS07855	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
DSJ_RS07860	COG3842	ATPase activity
DSJ_RS07870	COG1178	ABC-type Fe3 transport system permease component
DSJ_RS07880	COG1609	Transcriptional regulator
DSJ_RS07895	COG4783	chaperone-mediated protein folding
DSJ_RS07900	COG1393	Belongs to the ArsC family
DSJ_RS07905	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DSJ_RS07910	COG2233	PERMEase
DSJ_RS07920	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
DSJ_RS07925	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DSJ_RS07930	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DSJ_RS07935	COG0573	inorganic phosphate transmembrane transporter activity
DSJ_RS07940	COG0573	inorganic phosphate transmembrane transporter activity
DSJ_RS07955	COG0500	methyltransferase
DSJ_RS07975	COG3850	Histidine kinase
DSJ_RS08000	COG1940	carbohydrate kinase activity
DSJ_RS08005	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DSJ_RS08010	COG1172	Belongs to the binding-protein-dependent transport system permease family
DSJ_RS08015	COG1172	Belongs to the binding-protein-dependent transport system permease family
DSJ_RS08020	COG1129	ABC transporter
DSJ_RS08030	COG1349	DNA-binding transcription factor activity
DSJ_RS08035	COG5342	invasion associated locus B
DSJ_RS08040	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DSJ_RS08055	COG3493	citrate carrier protein
DSJ_RS08065	COG1454	alcohol dehydrogenase
DSJ_RS08070	COG2610	gluconate transmembrane transporter activity
DSJ_RS08085	COG1278	Cold shock
DSJ_RS08095	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DSJ_RS08100	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DSJ_RS08105	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
DSJ_RS08110	COG0321	lipoyl(octanoyl) transferase activity
DSJ_RS08120	COG1686	Belongs to the peptidase S11 family
DSJ_RS08125	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DSJ_RS08130	COG0772	Belongs to the SEDS family
DSJ_RS08135	COG0768	penicillin binding
DSJ_RS08140	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DSJ_RS08145	COG0799	negative regulation of ribosome biogenesis
DSJ_RS08155	COG1466	dna polymerase III delta subunit
DSJ_RS08160	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
DSJ_RS08165	COG0495	leucyl-tRNA aminoacylation
DSJ_RS08170	COG2888	peptidyl-tyrosine sulfation
DSJ_RS08180	COG0765	amino acid transport
DSJ_RS08195	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS08200	COG4372	Transposase
DSJ_RS08205	COG0815	Transfers the fatty acyl group on membrane lipoproteins
DSJ_RS08210	COG4535	Mg2 and Co2 transporter CorC
DSJ_RS08220	COG1702	phosphate starvation-inducible protein PhoH
DSJ_RS08230	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DSJ_RS08265	COG0367	asparagine synthase
DSJ_RS08270	COG0647	UMP catabolic process
DSJ_RS08275	COG1940	carbohydrate kinase activity
DSJ_RS08275	COG1846	Transcriptional regulator
DSJ_RS08280	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DSJ_RS08285	COG0363	glucosamine-6-phosphate deaminase activity
DSJ_RS08290	COG2190	(PTS) system
DSJ_RS08290	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DSJ_RS08290	COG1263	PTS System
DSJ_RS08295	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DSJ_RS08305	COG0735	belongs to the Fur family
DSJ_RS08320	COG0596	Alpha beta hydrolase
DSJ_RS08325	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
DSJ_RS08330	COG0033	Phosphoglucomutase
DSJ_RS08335	COG0745	RESPONSE REGULATOR receiver
DSJ_RS08345	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DSJ_RS08355	COG3272	Protein of unknown function (DUF1722)
DSJ_RS08365	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DSJ_RS08370	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
DSJ_RS08375	COG1984	allophanate hydrolase subunit 2
DSJ_RS08380	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
DSJ_RS08395	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
DSJ_RS08410	COG0372	Belongs to the citrate synthase family
DSJ_RS08420	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
DSJ_RS08430	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DSJ_RS08435	COG0567	Dehydrogenase, E1 component
DSJ_RS08440	COG0508	dehydrogenase complex catalyzes the overall conversion of
DSJ_RS08445	COG0045	succinate-CoA ligase (ADP-forming) activity
DSJ_RS08450	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DSJ_RS08455	COG1271	oxidase subunit
DSJ_RS08460	COG1294	oxidase, subunit
DSJ_RS08465	COG4890	Cyd operon protein YbgT
DSJ_RS08470	COG3790	cyd operon protein YbgE
DSJ_RS08475	COG0824	Thioesterase
DSJ_RS08480	COG0811	peptide transport
DSJ_RS08485	COG0848	biopolymer transport protein
DSJ_RS08490	COG3064	Membrane
DSJ_RS08500	COG2885	chlorophyll binding
DSJ_RS08505	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
DSJ_RS08530	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DSJ_RS08535	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
DSJ_RS08545	COG1230	cation diffusion facilitator family transporter
DSJ_RS08550	COG2205	protein histidine kinase activity
DSJ_RS08550	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DSJ_RS08565	COG4372	Transposase
DSJ_RS08570	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS08580	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DSJ_RS08585	COG0588	phosphoglycerate mutase activity
DSJ_RS08590	COG2017	converts alpha-aldose to the beta-anomer
DSJ_RS08600	COG1085	galactose-1-phosphate uridylyltransferase
DSJ_RS08605	COG1119	ATPase activity
DSJ_RS08610	COG2005	Transcriptional regulator
DSJ_RS08610	COG3585	molybdate ion transport
DSJ_RS08620	COG0725	ABC transporter, periplasmic molybdate-binding protein
DSJ_RS08625	COG4149	molybdate abc transporter
DSJ_RS08635	COG0561	phosphatase activity
DSJ_RS08640	COG2706	6-phosphogluconolactonase activity
DSJ_RS08645	COG1881	PFAM PEBP family protein
DSJ_RS08655	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
DSJ_RS08665	COG2226	methyltransferase
DSJ_RS08670	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
DSJ_RS08695	COG0521	Mo-molybdopterin cofactor biosynthetic process
DSJ_RS08700	COG0315	cyclic pyranopterin monophosphate synthase activity
DSJ_RS08705	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
DSJ_RS08710	COG0314	molybdopterin synthase activity
DSJ_RS08725	COG0670	Belongs to the BI1 family
DSJ_RS08735	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DSJ_RS08740	COG3568	Endonuclease Exonuclease Phosphatase
DSJ_RS08750	COG0513	Belongs to the DEAD box helicase family
DSJ_RS08755	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DSJ_RS08765	COG0306	phosphate transporter
DSJ_RS08775	COG4372	Transposase
DSJ_RS08780	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS08795	COG1376	ErfK ybiS ycfS ynhG family protein
DSJ_RS08800	COG3387	PFAM Glycoside hydrolase 15-related
DSJ_RS08805	COG1028	Short-chain dehydrogenase reductase Sdr
DSJ_RS08940	COG2369	cell adhesion
DSJ_RS08950	COG4373	Mu-like prophage FluMu protein gp28
DSJ_RS08990	COG4372	Transposase
DSJ_RS08995	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS09015	COG2986	histidine ammonia-lyase
DSJ_RS09025	COG1473	amidohydrolase
DSJ_RS09030	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DSJ_RS09055	COG0789	Transcriptional regulator
DSJ_RS09060	COG1174	glycine betaine transport
DSJ_RS09065	COG1125	glycine betaine transport
DSJ_RS09070	COG1174	glycine betaine transport
DSJ_RS09075	COG1732	Glycine betaine
DSJ_RS09080	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
DSJ_RS09100	COG0277	FAD linked oxidase domain protein
DSJ_RS09105	COG1511	domain protein
DSJ_RS09105	COG3264	Mechanosensitive ion channel
DSJ_RS09110	COG1686	Belongs to the peptidase S11 family
DSJ_RS09120	COG0586	Pfam SNARE associated Golgi protein
DSJ_RS09135	COG4382	Mu-like prophage protein Gp16
DSJ_RS09170	COG3267	Type II secretory pathway component ExeA
DSJ_RS09170	COG3409	Peptidoglycan-binding domain 1 protein
DSJ_RS09215	COG2986	histidine ammonia-lyase
DSJ_RS09235	COG1228	amidohydrolase
DSJ_RS09245	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DSJ_RS09255	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
DSJ_RS09260	COG1126	abc transporter atp-binding protein
DSJ_RS09265	COG0765	amino acid transport
DSJ_RS09270	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DSJ_RS09275	COG0783	Belongs to the Dps family
DSJ_RS09285	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
DSJ_RS09295	COG1321	iron dependent repressor
DSJ_RS09300	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DSJ_RS09305	COG1566	PFAM secretion protein HlyD family protein
DSJ_RS09310	COG2814	Major facilitator Superfamily
DSJ_RS09320	COG2916	Histone family protein nucleoid-structuring protein H-NS
DSJ_RS09325	COG0488	(ABC) transporter
DSJ_RS09330	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DSJ_RS09335	COG0303	'Molybdopterin
DSJ_RS09340	COG1446	asparaginase
DSJ_RS09345	COG4172	Belongs to the ABC transporter superfamily
DSJ_RS09380	COG2133	pyrroloquinoline quinone binding
DSJ_RS09390	COG1686	Belongs to the peptidase S11 family
DSJ_RS09395	COG0671	phosphoesterase, PA-phosphatase related
DSJ_RS09420	COG0778	Nitroreductase
DSJ_RS09435	COG4372	Transposase
DSJ_RS09440	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS09450	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DSJ_RS09455	COG3842	ATPase activity
DSJ_RS09460	COG1176	ABC-type spermidine putrescine transport system, permease component I
DSJ_RS09465	COG1177	transmembrane transport
DSJ_RS09475	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DSJ_RS09480	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DSJ_RS09485	COG4160	amino acid transport
DSJ_RS09490	COG4215	(ABC) transporter
DSJ_RS09495	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DSJ_RS09500	COG1126	abc transporter atp-binding protein
DSJ_RS09510	COG0393	Putative heavy-metal-binding
DSJ_RS09515	COG3023	N-Acetylmuramoyl-L-alanine amidase
DSJ_RS09520	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
DSJ_RS09525	COG0028	Belongs to the TPP enzyme family
DSJ_RS09530	COG2431	L-lysine efflux transmembrane transporter activity
DSJ_RS09535	COG3593	DNA synthesis involved in DNA repair
DSJ_RS09545	COG3593	DNA synthesis involved in DNA repair
DSJ_RS09550	COG1278	Cold shock
DSJ_RS09555	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
DSJ_RS09560	COG0542	response to heat
DSJ_RS09565	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DSJ_RS09570	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
DSJ_RS09575	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DSJ_RS09580	COG4988	ABC transporter
DSJ_RS09585	COG0492	ferredoxin-NADP+ reductase activity
DSJ_RS09595	COG3107	peptidoglycan biosynthetic process
DSJ_RS09595	COG1674	ftsk spoiiie
DSJ_RS09600	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
DSJ_RS09605	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DSJ_RS09610	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DSJ_RS09615	COG0477	Major facilitator Superfamily
DSJ_RS09620	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DSJ_RS09625	COG1882	Formate acetyltransferase
DSJ_RS09630	COG2116	formate transmembrane transporter activity
DSJ_RS09640	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS09645	COG4372	Transposase
DSJ_RS09650	COG1944	ATP diphosphatase activity
DSJ_RS09655	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
DSJ_RS09665	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
DSJ_RS09670	COG0539	negative regulation of cytoplasmic translation
DSJ_RS09675	COG0776	regulation of translation
DSJ_RS09690	COG1663	tetraacyldisaccharide 4'-kinase activity
DSJ_RS09695	COG3214	Protein conserved in bacteria
DSJ_RS09700	COG2835	tetraacyldisaccharide 4'-kinase activity
DSJ_RS09705	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
DSJ_RS09710	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DSJ_RS09715	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DSJ_RS09720	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
DSJ_RS09725	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
DSJ_RS09735	COG2989	Protein conserved in bacteria
DSJ_RS09740	COG3108	Peptidase M15
DSJ_RS09745	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DSJ_RS09760	COG0017	Asparaginyl-tRNA synthetase
DSJ_RS09765	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DSJ_RS09770	COG0308	aminopeptidase N
DSJ_RS09775	COG1116	anion transmembrane transporter activity
DSJ_RS09785	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DSJ_RS09790	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DSJ_RS09795	COG0431	NADPH-dependent FMN reductase
DSJ_RS09800	COG1216	Glycosyl transferase, family 2
DSJ_RS09810	COG0167	dihydroorotate dehydrogenase activity
DSJ_RS09820	COG0633	Ferredoxin
DSJ_RS09820	COG3217	Mosc domain protein beta barrel domain protein
DSJ_RS09825	COG0116	Belongs to the methyltransferase superfamily
DSJ_RS09825	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DSJ_RS09830	COG0488	(ABC) transporter
DSJ_RS09835	COG2995	paraquat-inducible protein a
DSJ_RS09840	COG3008	intermembrane lipid transfer
DSJ_RS09840	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DSJ_RS09845	COG3009	Protein conserved in bacteria
DSJ_RS09850	COG3130	regulation of translation
DSJ_RS09855	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DSJ_RS09860	COG1067	ATP-dependent peptidase activity
DSJ_RS09865	COG3120	sequence-specific DNA binding
DSJ_RS09880	COG3070	regulator of competence-specific genes
DSJ_RS09885	COG1289	transmembrane transporter activity
DSJ_RS09890	COG3304	Inner membrane component domain
DSJ_RS09895	COG0210	DNA helicase
DSJ_RS09910	COG1832	CoA-binding protein
DSJ_RS09920	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DSJ_RS09930	COG2920	part of a sulfur-relay system
DSJ_RS09935	COG0670	Belongs to the BI1 family
DSJ_RS09955	COG1012	belongs to the aldehyde dehydrogenase family
DSJ_RS09965	COG0655	NAD(P)H dehydrogenase (quinone) activity
DSJ_RS09975	COG1309	transcriptional regulator
DSJ_RS09980	COG0582	viral genome integration into host DNA
DSJ_RS09990	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DSJ_RS10095	COG1061	Type III restriction enzyme res subunit
DSJ_RS10120	COG3772	lysozyme
DSJ_RS10160	COG0582	viral genome integration into host DNA
DSJ_RS10260	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS10420	COG1309	transcriptional regulator
DSJ_RS10430	COG1113	amino acid transport
DSJ_RS10455	COG2197	response regulator
DSJ_RS10465	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DSJ_RS10485	COG4372	Transposase
DSJ_RS10490	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS10515	COG0659	secondary active sulfate transmembrane transporter activity
DSJ_RS10560	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DSJ_RS10575	COG2943	transferase activity, transferring hexosyl groups
DSJ_RS10580	COG5645	(Lipo)protein
DSJ_RS10595	COG1560	Kdo2-lipid A biosynthetic process
DSJ_RS10600	COG1054	Belongs to the UPF0176 family
DSJ_RS10610	COG3038	cytochrome b561
DSJ_RS10635	COG0418	dihydroorotase activity
DSJ_RS10645	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DSJ_RS10655	COG0673	inositol 2-dehydrogenase activity
DSJ_RS10660	COG0728	peptidoglycan biosynthetic process
DSJ_RS10665	COG0840	transmembrane signaling receptor activity
DSJ_RS10690	COG1558	bacterial-type flagellum-dependent cell motility
DSJ_RS10695	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
DSJ_RS10700	COG1749	Flagellar hook protein flgE
DSJ_RS10735	COG1256	bacterial-type flagellum assembly
DSJ_RS10745	COG4372	Transposase
DSJ_RS10750	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS10760	COG1530	ribonuclease E activity
DSJ_RS10765	COG0564	pseudouridine synthase activity
DSJ_RS10780	COG0333	Belongs to the bacterial ribosomal protein bL32 family
DSJ_RS10785	COG0416	fatty acid biosynthetic process
DSJ_RS10790	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DSJ_RS10800	COG1028	Short-chain dehydrogenase reductase Sdr
DSJ_RS10810	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DSJ_RS10815	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DSJ_RS10820	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DSJ_RS10825	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DSJ_RS10830	COG0470	DNA polymerase III
DSJ_RS10835	COG0084	hydrolase, TatD family'
DSJ_RS10840	COG1263	PTS System
DSJ_RS10840	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DSJ_RS10850	COG0537	adenosine 5'-monophosphoramidase activity
DSJ_RS10855	COG5633	Lipoprotein
DSJ_RS10860	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
DSJ_RS10880	COG1252	NADH dehydrogenase
DSJ_RS10885	COG3134	Outer membrane lipoprotein
DSJ_RS10895	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DSJ_RS10900	COG4591	ABC-type transport system involved in lipoprotein release permease component
DSJ_RS10910	COG4591	ABC-type transport system involved in lipoprotein release permease component
DSJ_RS10915	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DSJ_RS10925	COG2850	peptidyl-arginine hydroxylation
DSJ_RS10930	COG2205	protein histidine kinase activity
DSJ_RS10940	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DSJ_RS10945	COG2915	High frequency lysogenization protein hflD homolog
DSJ_RS10965	COG0538	isocitrate dehydrogenase activity
DSJ_RS10970	COG0582	viral genome integration into host DNA
DSJ_RS11050	COG1396	sequence-specific DNA binding
DSJ_RS11070	COG1484	DNA-dependent DNA replication
DSJ_RS11100	COG4725	Belongs to the MT-A70-like family
DSJ_RS11135	COG3179	chitinase
DSJ_RS11165	COG1475	DNA binding
DSJ_RS11315	COG0538	isocitrate dehydrogenase activity
DSJ_RS11350	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS11355	COG4372	Transposase
DSJ_RS11360	COG0477	Major facilitator Superfamily
DSJ_RS11390	COG0454	-acetyltransferase
DSJ_RS11400	COG1619	proteins homologs of microcin C7 resistance protein MccF
DSJ_RS11410	COG2390	Transcriptional regulator
DSJ_RS11415	COG3959	Transketolase, thiamine diphosphate binding domain
DSJ_RS11420	COG3958	Transketolase
DSJ_RS11425	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DSJ_RS11430	COG0668	transmembrane transport
DSJ_RS11435	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
DSJ_RS11440	COG2261	transglycosylase associated protein
DSJ_RS11450	COG2261	transglycosylase associated protein
DSJ_RS11465	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DSJ_RS11470	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
DSJ_RS11475	COG3381	protein complex oligomerization
DSJ_RS11485	COG0697	spore germination
DSJ_RS11490	COG0518	GMP synthase (glutamine-hydrolyzing) activity
DSJ_RS11490	COG0519	Catalyzes the synthesis of GMP from XMP
DSJ_RS11525	COG2723	6-phospho-beta-galactosidase activity
DSJ_RS11530	COG1263	PTS System
DSJ_RS11530	COG2190	(PTS) system
DSJ_RS11530	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DSJ_RS11535	COG3711	transcriptional antiterminator
DSJ_RS11550	COG0840	transmembrane signaling receptor activity
DSJ_RS11560	COG5001	Diguanylate cyclase
DSJ_RS11560	COG3300	MHYT domain
DSJ_RS11565	COG4372	Transposase
DSJ_RS11570	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS11605	COG0531	amino acid
DSJ_RS11620	COG0659	secondary active sulfate transmembrane transporter activity
DSJ_RS11645	COG0386	Belongs to the glutathione peroxidase family
DSJ_RS11660	COG1902	pentaerythritol trinitrate reductase activity
DSJ_RS11665	COG0640	Transcriptional regulator
DSJ_RS11670	COG0840	transmembrane signaling receptor activity
DSJ_RS11675	COG0582	viral genome integration into host DNA
DSJ_RS11690	COG1129	ABC transporter
DSJ_RS11695	COG1172	Belongs to the binding-protein-dependent transport system permease family
DSJ_RS11710	COG1012	belongs to the aldehyde dehydrogenase family
DSJ_RS11715	COG1012	belongs to the aldehyde dehydrogenase family
DSJ_RS11725	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DSJ_RS11735	COG0601	transmembrane transport
DSJ_RS11740	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DSJ_RS11760	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DSJ_RS11765	COG1473	amidohydrolase
DSJ_RS11775	COG1522	sequence-specific DNA binding
DSJ_RS11780	COG0028	Belongs to the TPP enzyme family
DSJ_RS11785	COG0300	oxidoreductase activity
DSJ_RS11790	COG2188	Transcriptional regulator
DSJ_RS11795	COG3624	Phosphonate C-P lyase system protein PhnG
DSJ_RS11800	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
DSJ_RS11805	COG3626	phosphonate metabolism
DSJ_RS11810	COG3627	carbon phosphorus lyase activity
DSJ_RS11815	COG4107	phosphonate C-P lyase system protein PhnK
DSJ_RS11820	COG4778	phosphonate C-P lyase system protein PhnL
DSJ_RS11830	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
DSJ_RS11835	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DSJ_RS11845	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
DSJ_RS11855	COG3639	organic phosphonate transmembrane transporter activity
DSJ_RS11860	COG0784	Response regulator, receiver
DSJ_RS11860	COG4191	Histidine kinase
DSJ_RS11865	COG1129	ABC transporter
DSJ_RS11870	COG1172	Belongs to the binding-protein-dependent transport system permease family
DSJ_RS11885	COG0191	fructose-bisphosphate aldolase activity
DSJ_RS11900	COG2252	PERMEase
DSJ_RS11915	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DSJ_RS11920	COG4372	Transposase
DSJ_RS11925	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS11940	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
DSJ_RS11950	COG4139	cobalamin transport
DSJ_RS11965	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
DSJ_RS11985	COG1418	mRNA catabolic process
DSJ_RS11995	COG0840	transmembrane signaling receptor activity
DSJ_RS12005	COG3727	T/G mismatch-specific endonuclease activity
DSJ_RS12015	COG2354	Protein conserved in bacteria
DSJ_RS12025	COG1215	transferase activity, transferring glycosyl groups
DSJ_RS12050	COG0840	transmembrane signaling receptor activity
DSJ_RS12070	COG1338	Plays a role in the flagellum-specific transport system
DSJ_RS12080	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DSJ_RS12085	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DSJ_RS12090	COG1580	Controls the rotational direction of flagella during chemotaxis
DSJ_RS12100	COG2882	bacterial-type flagellum organization
DSJ_RS12110	COG1317	bacterial-type flagellum organization
DSJ_RS12115	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
DSJ_RS12120	COG1766	The M ring may be actively involved in energy transduction
DSJ_RS12125	COG1677	Flagellar hook-basal body complex protein FliE
DSJ_RS12130	COG0582	viral genome integration into host DNA
DSJ_RS12245	COG0305	Participates in initiation and elongation during chromosome replication
DSJ_RS12325	COG3179	chitinase
DSJ_RS12355	COG5410	chromosome segregation
DSJ_RS12515	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DSJ_RS12580	COG1216	Glycosyl transferase, family 2
DSJ_RS12580	COG0438	transferase activity, transferring glycosyl groups
DSJ_RS12600	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS12605	COG4372	Transposase
DSJ_RS12635	COG1181	Belongs to the D-alanine--D-alanine ligase family
DSJ_RS12685	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DSJ_RS12690	COG0765	amino acid transport
DSJ_RS12695	COG1126	abc transporter atp-binding protein
DSJ_RS12705	COG0582	viral genome integration into host DNA
DSJ_RS12710	COG0012	GTP binding
DSJ_RS12715	COG0193	aminoacyl-tRNA hydrolase activity
DSJ_RS12730	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DSJ_RS12735	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
DSJ_RS12740	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
DSJ_RS12745	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
DSJ_RS12750	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DSJ_RS12765	COG2912	Transglutaminase-like superfamily
DSJ_RS12775	COG0387	Pfam Sodium calcium exchanger
DSJ_RS12780	COG4572	Cation transport regulator
DSJ_RS12785	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
DSJ_RS12790	COG0515	serine threonine protein kinase
DSJ_RS12820	COG1360	Flagellar Motor Protein
DSJ_RS12830	COG3707	response regulator
DSJ_RS12835	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DSJ_RS12845	COG1116	anion transmembrane transporter activity
DSJ_RS12850	COG2146	nitrite reductase [NAD(P)H] activity
DSJ_RS12850	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DSJ_RS12855	COG0243	molybdopterin cofactor binding
DSJ_RS12860	COG1648	precorrin-2 dehydrogenase activity
DSJ_RS12860	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
DSJ_RS12865	COG1349	DNA-binding transcription factor activity
DSJ_RS12870	COG1028	Short-chain dehydrogenase reductase Sdr
DSJ_RS12875	COG1879	ABC-type sugar transport system periplasmic component
DSJ_RS12885	COG1129	ABC transporter
DSJ_RS12890	COG4372	Transposase
DSJ_RS12895	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS12905	COG1172	Belongs to the binding-protein-dependent transport system permease family
DSJ_RS12920	COG3781	membrane
DSJ_RS12940	COG1012	belongs to the aldehyde dehydrogenase family
DSJ_RS12945	COG3724	N-succinylarginine dihydrolase activity
DSJ_RS12950	COG2988	succinylglutamate desuccinylase activity
DSJ_RS12955	COG3678	ATP-independent chaperone mediated protein folding
DSJ_RS12960	COG0322	excinuclease ABC activity
DSJ_RS12975	COG2814	Major facilitator Superfamily
DSJ_RS12980	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DSJ_RS12990	COG1823	symporter activity
DSJ_RS12995	COG1988	membrane-bound metal-dependent
DSJ_RS13000	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DSJ_RS13010	COG3001	Fructosamine kinase
DSJ_RS13020	COG3137	Salt-induced outer membrane protein
DSJ_RS13025	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DSJ_RS13035	COG0291	Belongs to the bacterial ribosomal protein bL35 family
DSJ_RS13055	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DSJ_RS13065	COG0776	regulation of translation
DSJ_RS13085	COG0791	NLP P60 protein
DSJ_RS13100	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
DSJ_RS13105	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DSJ_RS13110	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
DSJ_RS13115	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DSJ_RS13115	COG0574	Belongs to the PEP-utilizing enzyme family
DSJ_RS13125	COG0628	permease
DSJ_RS13130	COG0277	FAD linked oxidase domain protein
DSJ_RS13130	COG0247	lactate metabolic process
DSJ_RS13140	COG0316	Belongs to the HesB IscA family
DSJ_RS13145	COG0719	Fe-S assembly protein
DSJ_RS13150	COG0396	ATPase activity
DSJ_RS13155	COG0719	Fe-S assembly protein
DSJ_RS13165	COG2166	iron-sulfur cluster assembly
DSJ_RS13205	COG0307	riboflavin synthase, alpha
DSJ_RS13215	COG2814	Major facilitator Superfamily
DSJ_RS13220	COG0583	DNA-binding transcription factor activity
DSJ_RS13225	COG1609	Transcriptional regulator
DSJ_RS13230	COG0791	NLP P60 protein
DSJ_RS13235	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
DSJ_RS13240	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DSJ_RS13250	COG1902	pentaerythritol trinitrate reductase activity
DSJ_RS13255	COG1309	transcriptional regulator
DSJ_RS13260	COG3313	Fe-S protein
DSJ_RS13265	COG4989	oxidoreductase activity
DSJ_RS13275	COG4989	oxidoreductase activity
DSJ_RS13300	COG1566	PFAM secretion protein HlyD family protein
DSJ_RS13310	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS13315	COG4372	Transposase
DSJ_RS13320	COG1566	PFAM secretion protein HlyD family protein
DSJ_RS13330	COG1846	Transcriptional regulator
DSJ_RS13335	COG3133	Outer membrane lipoprotein
DSJ_RS13340	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
DSJ_RS13350	COG2200	EAL domain
DSJ_RS13365	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS13370	COG4372	Transposase
DSJ_RS13380	COG1028	Short-chain dehydrogenase reductase Sdr
DSJ_RS13395	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
DSJ_RS13400	COG0753	catalase activity
DSJ_RS13415	COG2351	hydroxyisourate hydrolase activity
DSJ_RS13420	COG3895	Periplasmic Protein
DSJ_RS13430	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DSJ_RS13435	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
DSJ_RS13440	COG0625	glutathione transferase activity
DSJ_RS13450	COG0504	CTP synthase activity
DSJ_RS13455	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DSJ_RS13460	COG4660	Part of a membrane complex involved in electron transport
DSJ_RS13465	COG4659	FMN binding
DSJ_RS13470	COG4658	electron transport chain
DSJ_RS13475	COG4656	Part of a membrane complex involved in electron transport
DSJ_RS13480	COG2878	Part of a membrane complex involved in electron transport
DSJ_RS13485	COG4657	Part of a membrane complex involved in electron transport
DSJ_RS13500	COG1522	sequence-specific DNA binding
DSJ_RS13505	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DSJ_RS13520	COG1278	Cold shock
DSJ_RS13525	COG3122	Protein conserved in bacteria
DSJ_RS13530	COG0564	pseudouridine synthase activity
DSJ_RS13540	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
DSJ_RS13545	COG0668	transmembrane transport
DSJ_RS13550	COG0840	transmembrane signaling receptor activity
DSJ_RS13555	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
DSJ_RS13580	COG2211	Major facilitator Superfamily
DSJ_RS13590	COG0673	inositol 2-dehydrogenase activity
DSJ_RS13625	COG3729	General stress protein
DSJ_RS13630	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DSJ_RS13640	COG2207	Transcriptional regulator
DSJ_RS13655	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DSJ_RS13655	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DSJ_RS13665	COG2160	L-arabinose isomerase activity
DSJ_RS13670	COG1069	ribulokinase activity
DSJ_RS13675	COG1879	ABC-type sugar transport system periplasmic component
DSJ_RS13680	COG1129	ABC transporter
DSJ_RS13685	COG1172	Belongs to the binding-protein-dependent transport system permease family
DSJ_RS13700	COG4372	Transposase
DSJ_RS13705	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS13715	COG0673	inositol 2-dehydrogenase activity
DSJ_RS13720	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DSJ_RS13725	COG5339	Protein conserved in bacteria
DSJ_RS13730	COG1482	cell wall glycoprotein biosynthetic process
DSJ_RS13745	COG0671	phosphoesterase, PA-phosphatase related
DSJ_RS13750	COG0390	transport system, permease component
DSJ_RS13755	COG4619	ABC transporter
DSJ_RS13770	COG4372	Transposase
DSJ_RS13775	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS13800	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DSJ_RS13810	COG4290	ribonuclease
DSJ_RS13835	COG3135	benzoate transporter
DSJ_RS13840	COG1396	sequence-specific DNA binding
DSJ_RS13845	COG1335	isochorismatase
DSJ_RS13880	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
DSJ_RS13880	COG2213	PTS system mannitol-specific
DSJ_RS13920	COG2130	NADP-dependent
DSJ_RS13970	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS13975	COG4372	Transposase
DSJ_RS14000	COG1640	4-alpha-glucanotransferase
DSJ_RS14005	COG0058	SHG alpha-glucan phosphorylase activity
DSJ_RS14015	COG2223	nitrite transmembrane transporter activity
DSJ_RS14025	COG1649	PFAM Uncharacterised BCR, COG1649
DSJ_RS14040	COG1285	pathogenesis
DSJ_RS14045	COG0791	NLP P60 protein
DSJ_RS14060	COG1028	Short-chain dehydrogenase reductase Sdr
DSJ_RS14075	COG0726	polysaccharide deacetylase
DSJ_RS14115	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
DSJ_RS14145	COG4372	Transposase
DSJ_RS14150	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS14175	COG1396	sequence-specific DNA binding
DSJ_RS14185	COG1472	Belongs to the glycosyl hydrolase 3 family
DSJ_RS14190	COG2211	Major facilitator Superfamily
DSJ_RS14205	COG1028	Short-chain dehydrogenase reductase Sdr
DSJ_RS14225	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DSJ_RS14230	COG0339	signal peptide processing
DSJ_RS14240	COG1529	Aldehyde oxidase and xanthine dehydrogenase
DSJ_RS14250	COG0402	S-adenosylhomocysteine deaminase activity
DSJ_RS14255	COG4221	oxidoreductase activity
DSJ_RS14275	COG0477	Major facilitator Superfamily
DSJ_RS14300	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
DSJ_RS14305	COG1940	carbohydrate kinase activity
DSJ_RS14310	COG0583	DNA-binding transcription factor activity
DSJ_RS14315	COG2814	Major facilitator Superfamily
DSJ_RS14325	COG3038	cytochrome b561
DSJ_RS14330	COG2814	Major facilitator Superfamily
DSJ_RS14340	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DSJ_RS14370	COG5383	Protein conserved in bacteria
DSJ_RS14380	COG0583	DNA-binding transcription factor activity
DSJ_RS14385	COG2840	Smr protein MutS2
DSJ_RS14390	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DSJ_RS14400	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
DSJ_RS14405	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
DSJ_RS14415	COG0531	amino acid
DSJ_RS14425	COG0745	RESPONSE REGULATOR receiver
DSJ_RS14430	COG2205	protein histidine kinase activity
DSJ_RS14435	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
DSJ_RS14445	COG3591	Belongs to the peptidase S1B family
DSJ_RS14450	COG1643	Atp-dependent helicase
DSJ_RS14460	COG3784	Protein of unknown function (DUF1318)
DSJ_RS14470	COG2911	Protein conserved in bacteria
DSJ_RS14475	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DSJ_RS14485	COG1285	pathogenesis
DSJ_RS14500	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS14525	COG4166	transmembrane transport
DSJ_RS14530	COG2866	Carboxypeptidase
DSJ_RS14535	COG4948	Mandelate Racemase Muconate Lactonizing
DSJ_RS14540	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DSJ_RS14550	COG3768	UPF0283 membrane protein
DSJ_RS14555	COG3106	COG3106 Predicted ATPase
DSJ_RS14565	COG1983	PspC domain protein
DSJ_RS14575	COG1842	Phage shock protein A
DSJ_RS14580	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
DSJ_RS14595	COG4168	peptide transport system, permease
DSJ_RS14605	COG4172	Belongs to the ABC transporter superfamily
DSJ_RS14610	COG4172	Belongs to the ABC transporter superfamily
DSJ_RS14615	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
DSJ_RS14620	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DSJ_RS14620	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DSJ_RS14625	COG0583	DNA-binding transcription factor activity
DSJ_RS14630	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DSJ_RS14630	COG1263	PTS System
DSJ_RS14640	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
DSJ_RS14645	COG1966	Carbon starvation protein
DSJ_RS14650	COG2879	small protein
DSJ_RS14655	COG5001	Diguanylate cyclase
DSJ_RS14660	COG1024	Enoyl-CoA hydratase
DSJ_RS14665	COG0235	Class ii aldolase
DSJ_RS14680	COG0023	Translation Initiation Factor
DSJ_RS14685	COG0284	orotidine-5'-phosphate decarboxylase activity
DSJ_RS14690	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
DSJ_RS14695	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
DSJ_RS14700	COG0671	phosphoesterase, PA-phosphatase related
DSJ_RS14740	COG0616	signal peptide processing
DSJ_RS14745	COG1028	Short-chain dehydrogenase reductase Sdr
DSJ_RS14755	COG2851	Citrate transporter
DSJ_RS14780	COG0009	L-threonylcarbamoyladenylate synthase
DSJ_RS14785	COG0613	PHP domain protein
DSJ_RS14795	COG0512	Glutamine amidotransferase of anthranilate synthase
DSJ_RS14795	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DSJ_RS14800	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DSJ_RS14810	COG0133	tryptophan synthase activity
DSJ_RS14815	COG0159	tryptophan synthase activity
DSJ_RS14825	COG3047	cAMP biosynthetic process
DSJ_RS14830	COG0727	PFAM Uncharacterised protein family (UPF0153)
DSJ_RS14840	COG2917	probably involved in intracellular septation
DSJ_RS14845	COG1607	acyl-coa hydrolase
DSJ_RS14860	COG2350	Protein conserved in bacteria
DSJ_RS14865	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DSJ_RS14870	COG3099	Belongs to the UPF0263 family
DSJ_RS14880	COG0444	Belongs to the ABC transporter superfamily
DSJ_RS14885	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DSJ_RS14890	COG0601	transmembrane transport
DSJ_RS14900	COG4166	transmembrane transport
DSJ_RS14905	COG4372	Transposase
DSJ_RS14910	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS14920	COG2095	MarC family integral membrane protein
DSJ_RS14925	COG1454	alcohol dehydrogenase
DSJ_RS14925	COG1012	belongs to the aldehyde dehydrogenase family
DSJ_RS14935	COG2916	Histone family protein nucleoid-structuring protein H-NS
DSJ_RS14950	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DSJ_RS14955	COG0745	RESPONSE REGULATOR receiver
DSJ_RS14960	COG1752	Esterase of the alpha-beta hydrolase superfamily
DSJ_RS14965	COG3012	SEC-C Motif Domain Protein
DSJ_RS14970	COG0788	formyltetrahydrofolate deformylase activity
DSJ_RS14985	COG0708	Exodeoxyribonuclease III
DSJ_RS15000	COG0778	Nitroreductase
DSJ_RS15005	COG0616	signal peptide processing
DSJ_RS15010	COG0252	asparaginase activity
DSJ_RS15015	COG1335	isochorismatase
DSJ_RS15020	COG3139	Protein of unknown function (DUF1315)
DSJ_RS15045	COG0656	L-ascorbic acid biosynthetic process
DSJ_RS15050	COG3713	MltA-interacting MipA family protein
DSJ_RS15055	COG2766	serine protein kinase
DSJ_RS15060	COG2718	Belongs to the UPF0229 family
DSJ_RS15090	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DSJ_RS15095	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DSJ_RS15100	COG2719	SpoVR family
DSJ_RS15120	COG0179	Fumarylacetoacetate (FAA) hydrolase
DSJ_RS15125	COG3100	YcgL domain-containing protein
DSJ_RS15130	COG0850	regulation of cytokinetic process
DSJ_RS15135	COG2894	cell division
DSJ_RS15140	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
DSJ_RS15150	COG0318	PFAM AMP-dependent synthetase and ligase
DSJ_RS15155	COG3065	identical protein binding
DSJ_RS15160	COG1214	PFAM Peptidase M22, glycoprotease
DSJ_RS15165	COG1199	ATP-dependent helicase activity
DSJ_RS15170	COG0251	oxidation-reduction process
DSJ_RS15180	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DSJ_RS15190	COG1760	l-serine dehydratase
DSJ_RS15195	COG2200	EAL domain
DSJ_RS15200	COG1253	flavin adenine dinucleotide binding
DSJ_RS15205	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DSJ_RS15205	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
DSJ_RS15210	COG3715	PTS system
DSJ_RS15215	COG3716	PTS system mannose fructose sorbose family IID component
DSJ_RS15225	COG2226	methyltransferase
DSJ_RS15250	COG1414	Transcriptional regulator
DSJ_RS15255	COG2814	Major facilitator Superfamily
DSJ_RS15260	COG4372	Transposase
DSJ_RS15265	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS15275	COG2814	Major facilitator Superfamily
DSJ_RS15280	COG4372	Transposase
DSJ_RS15285	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS15295	COG2814	Major facilitator Superfamily
DSJ_RS15310	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
DSJ_RS15315	COG1956	GAF domain-containing protein
DSJ_RS15320	COG2995	paraquat-inducible protein a
DSJ_RS15325	COG3008	intermembrane lipid transfer
DSJ_RS15335	COG3813	Protein conserved in bacteria
DSJ_RS15340	COG0477	Major facilitator Superfamily
DSJ_RS15345	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DSJ_RS15350	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DSJ_RS15390	COG0840	transmembrane signaling receptor activity
DSJ_RS15405	COG1276	copper resistance
DSJ_RS15410	COG2372	response to copper ion
DSJ_RS15420	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DSJ_RS15430	COG4372	Transposase
DSJ_RS15435	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS15445	COG1770	oligopeptidase
DSJ_RS15450	COG2979	Protein of unknown function (DUF533)
DSJ_RS15460	COG0800	Aldolase
DSJ_RS15465	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DSJ_RS15470	COG0469	pyruvate kinase activity
DSJ_RS15480	COG1560	Kdo2-lipid A biosynthetic process
DSJ_RS15485	COG0739	heme binding
DSJ_RS15490	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
DSJ_RS15500	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DSJ_RS15505	COG2255	four-way junction helicase activity
DSJ_RS15510	COG0632	four-way junction helicase activity
DSJ_RS15520	COG0217	transcriptional regulatory protein
DSJ_RS15530	COG0494	nUDIX hydrolase
DSJ_RS15540	COG1801	Protein of unknown function DUF72
DSJ_RS15545	COG3788	relative of glutathione S-transferase, MAPEG superfamily
DSJ_RS15555	COG0500	methyltransferase
DSJ_RS15560	COG1280	lysine exporter protein (LysE YggA)
DSJ_RS15575	COG3142	Participates in the control of copper homeostasis
DSJ_RS15580	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DSJ_RS15585	COG3102	Protein conserved in bacteria
DSJ_RS15590	COG0018	arginyl-trna synthetase
DSJ_RS15620	COG0745	RESPONSE REGULATOR receiver
DSJ_RS15630	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
DSJ_RS15635	COG0840	transmembrane signaling receptor activity
DSJ_RS15640	COG0840	transmembrane signaling receptor activity
DSJ_RS15645	COG0835	chemotaxis
DSJ_RS15690	COG0745	RESPONSE REGULATOR receiver
DSJ_RS15695	COG0642	Histidine kinase
DSJ_RS15700	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DSJ_RS15725	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DSJ_RS15740	COG0477	Major facilitator Superfamily
DSJ_RS15750	COG1702	phosphate starvation-inducible protein PhoH
DSJ_RS15770	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DSJ_RS15775	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
DSJ_RS15775	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
DSJ_RS15775	COG0506	proline dehydrogenase activity
DSJ_RS15805	COG4372	Transposase
DSJ_RS15810	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS15820	COG1280	lysine exporter protein (LysE YggA)
DSJ_RS15825	COG1309	transcriptional regulator
DSJ_RS15830	COG0277	FAD linked oxidase domain protein
DSJ_RS15865	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS15870	COG4372	Transposase
DSJ_RS15890	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
DSJ_RS15940	COG2842	Transposition protein
DSJ_RS15950	COG3423	Transcriptional regulator
DSJ_RS16000	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DSJ_RS16010	COG1609	Transcriptional regulator
DSJ_RS16015	COG2926	Belongs to the UPF0265 family
DSJ_RS16020	COG1289	transmembrane transporter activity
DSJ_RS16040	COG2925	Exonuclease
DSJ_RS16045	COG2610	gluconate transmembrane transporter activity
DSJ_RS16050	COG3622	Belongs to the hyi family
DSJ_RS16055	COG0235	Class ii aldolase
DSJ_RS16060	COG3395	kinase activity
DSJ_RS16065	COG2084	Dehydrogenase
DSJ_RS16070	COG1349	DNA-binding transcription factor activity
DSJ_RS16075	COG0531	amino acid
DSJ_RS16080	COG0174	glutamine synthetase
DSJ_RS16085	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DSJ_RS16090	COG1396	sequence-specific DNA binding
DSJ_RS16090	COG1917	Cupin 2, conserved barrel domain protein
DSJ_RS16095	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DSJ_RS16100	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DSJ_RS16105	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
DSJ_RS16115	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DSJ_RS16125	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
DSJ_RS16130	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
DSJ_RS16135	COG0107	imidazoleglycerol-phosphate synthase activity
DSJ_RS16145	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DSJ_RS16165	COG0438	transferase activity, transferring glycosyl groups
DSJ_RS16180	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DSJ_RS16190	COG0438	transferase activity, transferring glycosyl groups
DSJ_RS16190	COG0297	glycogen (starch) synthase activity
DSJ_RS16205	COG1215	transferase activity, transferring glycosyl groups
DSJ_RS16205	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
DSJ_RS16210	COG2244	polysaccharide biosynthetic process
DSJ_RS16220	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DSJ_RS16230	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DSJ_RS16235	COG1088	dTDP-glucose 4,6-dehydratase activity
DSJ_RS16250	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DSJ_RS16290	COG0463	Glycosyl transferase, family 2
DSJ_RS16290	COG1216	Glycosyl transferase, family 2
DSJ_RS16330	COG1253	flavin adenine dinucleotide binding
DSJ_RS16335	COG2982	Protein involved in outer membrane biogenesis
DSJ_RS16340	COG0717	Belongs to the dCTP deaminase family
DSJ_RS16345	COG0572	uridine kinase
DSJ_RS16355	COG5002	protein histidine kinase activity
DSJ_RS16355	COG3447	MASE1 domain protein
DSJ_RS16355	COG5001	Diguanylate cyclase
DSJ_RS16365	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DSJ_RS16375	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DSJ_RS16385	COG2205	protein histidine kinase activity
DSJ_RS16390	COG0745	RESPONSE REGULATOR receiver
DSJ_RS16395	COG0826	peptidase U32
DSJ_RS16400	COG1597	lipid kinase activity
DSJ_RS16405	COG0246	Mannitol dehydrogenase
DSJ_RS16410	COG1802	Transcriptional regulator
DSJ_RS16435	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS16440	COG4372	Transposase
DSJ_RS16455	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DSJ_RS16490	COG0450	alkyl hydroperoxide reductase
DSJ_RS16500	COG0489	protein tyrosine kinase activity
DSJ_RS16505	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DSJ_RS16505	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DSJ_RS16515	COG1380	Effector of murein hydrolase LrgA
DSJ_RS16520	COG1346	cytolysis
DSJ_RS16530	COG0281	malic enzyme
DSJ_RS16535	COG2949	membrane
DSJ_RS16560	COG2311	Membrane
DSJ_RS16570	COG0477	Major facilitator Superfamily
DSJ_RS16575	COG0583	DNA-binding transcription factor activity
DSJ_RS16590	COG1120	ATPase activity
DSJ_RS16595	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DSJ_RS16600	COG3344	reverse transcriptase
DSJ_RS16610	COG0833	amino acid
DSJ_RS16615	COG0583	DNA-binding transcription factor activity
DSJ_RS16625	COG2855	membrane
DSJ_RS16635	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
DSJ_RS16640	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DSJ_RS16640	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DSJ_RS16640	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
DSJ_RS16645	COG1105	Belongs to the carbohydrate kinase PfkB family
DSJ_RS16650	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
DSJ_RS16650	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DSJ_RS16660	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DSJ_RS16665	COG0523	cobalamin synthesis protein
DSJ_RS16670	COG0671	phosphoesterase, PA-phosphatase related
DSJ_RS16675	COG0791	NLP P60 protein
DSJ_RS16685	COG4166	transmembrane transport
DSJ_RS16690	COG4174	ABC transporter (Permease)
DSJ_RS16695	COG4239	(ABC) transporter, permease
DSJ_RS16700	COG4172	Belongs to the ABC transporter superfamily
DSJ_RS16710	COG2814	Major facilitator Superfamily
DSJ_RS16720	COG1061	Type III restriction enzyme res subunit
DSJ_RS16725	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
DSJ_RS16730	COG3081	Nucleoid-associated protein
DSJ_RS16735	COG3082	Protein of unknown function (DUF1414)
DSJ_RS16750	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DSJ_RS16915	COG1403	HNH endonuclease
DSJ_RS17000	COG2226	methyltransferase
DSJ_RS17000	COG2267	carboxylic ester hydrolase activity
DSJ_RS17020	COG0582	viral genome integration into host DNA
DSJ_RS17045	COG4372	Transposase
DSJ_RS17050	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS17110	COG0668	transmembrane transport
DSJ_RS17150	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS17155	COG4372	Transposase
DSJ_RS17180	COG2223	nitrite transmembrane transporter activity
DSJ_RS17190	COG0642	Histidine kinase
DSJ_RS17190	COG2198	Histidine kinase
DSJ_RS17210	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DSJ_RS17215	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DSJ_RS17220	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DSJ_RS17225	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DSJ_RS17230	COG0251	oxidation-reduction process
DSJ_RS17235	COG1309	transcriptional regulator
DSJ_RS17245	COG4575	ribosome binding
DSJ_RS17255	COG2153	protein acetylation
DSJ_RS17265	COG1007	ATP synthesis coupled electron transport
DSJ_RS17270	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DSJ_RS17275	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DSJ_RS17280	COG0713	ATP synthesis coupled electron transport
DSJ_RS17285	COG0839	Belongs to the complex I subunit 6 family
DSJ_RS17315	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DSJ_RS17315	COG0649	NAD binding
DSJ_RS17330	COG0583	DNA-binding transcription factor activity
DSJ_RS17335	COG0436	Aminotransferase
DSJ_RS17340	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
DSJ_RS17345	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DSJ_RS17350	COG3013	Belongs to the UPF0304 family
DSJ_RS17355	COG3092	negative regulation of chromosome organization
DSJ_RS17360	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DSJ_RS17365	COG0280	phosphate acetyltransferase
DSJ_RS17365	COG0857	belongs to the CobB CobQ family
DSJ_RS17370	COG3842	ATPase activity
DSJ_RS17380	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DSJ_RS17390	COG1176	ABC-type spermidine putrescine transport system, permease component I
DSJ_RS17400	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
DSJ_RS17405	COG0625	glutathione transferase activity
DSJ_RS17410	COG1090	epimerase
DSJ_RS17420	COG1070	Carbohydrate kinase
DSJ_RS17435	COG4598	ABC transporter
DSJ_RS17440	COG4160	amino acid transport
DSJ_RS17445	COG4215	(ABC) transporter
DSJ_RS17455	COG0163	prenyltransferase activity
DSJ_RS17460	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DSJ_RS17465	COG1286	toxin biosynthetic process
DSJ_RS17470	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
DSJ_RS17475	COG0285	dihydrofolate synthase activity
DSJ_RS17485	COG0586	Pfam SNARE associated Golgi protein
DSJ_RS17495	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DSJ_RS17550	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DSJ_RS17565	COG3101	peptidyl-lysine hydroxylation
DSJ_RS17570	COG0730	response to heat
DSJ_RS17580	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
DSJ_RS17595	COG0840	transmembrane signaling receptor activity
DSJ_RS17600	COG2062	phosphohistidine phosphatase, SixA
DSJ_RS17605	COG1024	Enoyl-CoA hydratase
DSJ_RS17605	COG1250	3-hydroxyacyl-CoA dehydrogenase
DSJ_RS17615	COG3691	Protein conserved in bacteria
DSJ_RS17620	COG2067	long-chain fatty acid transport protein
DSJ_RS17635	COG3088	subunit of a heme lyase
DSJ_RS17635	COG4235	cytochrome complex assembly
DSJ_RS17645	COG1138	Cytochrome C-type biogenesis protein
DSJ_RS17650	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
DSJ_RS17655	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DSJ_RS17660	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DSJ_RS17665	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DSJ_RS17680	COG2116	formate transmembrane transporter activity
DSJ_RS17685	COG2801	Transposase and inactivated derivatives
DSJ_RS17690	COG4372	Transposase
DSJ_RS17695	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS17730	COG5301	cellulose 1,4-beta-cellobiosidase activity
DSJ_RS17780	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DSJ_RS17785	COG3093	addiction module antidote protein HigA
DSJ_RS17915	COG3179	chitinase
DSJ_RS17925	COG0582	viral genome integration into host DNA
DSJ_RS17935	COG0582	viral genome integration into host DNA
DSJ_RS17990	COG0741	lytic transglycosylase activity
DSJ_RS18065	COG1783	phage Terminase large subunit
DSJ_RS18095	COG3179	chitinase
DSJ_RS18165	COG0305	Participates in initiation and elongation during chromosome replication
DSJ_RS18205	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DSJ_RS18215	COG0629	single-stranded DNA binding
DSJ_RS18220	COG0338	D12 class N6 adenine-specific DNA methyltransferase
DSJ_RS18235	COG0582	viral genome integration into host DNA
DSJ_RS18250	COG0582	viral genome integration into host DNA
DSJ_RS18260	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS18265	COG4372	Transposase
DSJ_RS18285	COG0582	viral genome integration into host DNA
DSJ_RS18290	COG4695	Portal protein
DSJ_RS18355	COG0584	glycerophosphoryl diester phosphodiesterase
DSJ_RS18360	COG3842	ATPase activity
DSJ_RS18365	COG3833	ABC-type maltose transport systems, permease component
DSJ_RS18405	COG2223	nitrite transmembrane transporter activity
DSJ_RS18445	COG0436	Aminotransferase
DSJ_RS18455	COG3275	phosphorelay sensor kinase activity
DSJ_RS18460	COG3279	Response regulator of the LytR AlgR family
DSJ_RS18465	COG0837	glucose binding
DSJ_RS18475	COG0667	Aldo Keto reductase
DSJ_RS18490	COG1914	H( )-stimulated, divalent metal cation uptake system
DSJ_RS18495	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DSJ_RS18520	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS18525	COG4372	Transposase
DSJ_RS18565	COG2116	formate transmembrane transporter activity
DSJ_RS18570	COG3415	Transposase
DSJ_RS18575	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DSJ_RS18610	COG0583	DNA-binding transcription factor activity
DSJ_RS18615	COG0385	Bile acid
DSJ_RS18620	COG3530	Putative quorum-sensing-regulated virulence factor
DSJ_RS18630	COG3115	cell septum assembly
DSJ_RS18635	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
DSJ_RS18660	COG2205	protein histidine kinase activity
DSJ_RS18665	COG0745	RESPONSE REGULATOR receiver
DSJ_RS18675	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
DSJ_RS18680	COG4208	sulfate ABC transporter
DSJ_RS18685	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
DSJ_RS18690	COG4150	thiosulfate binding
DSJ_RS18705	COG0456	acetyltransferase
DSJ_RS18715	COG0408	coproporphyrinogen oxidase activity
DSJ_RS18725	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DSJ_RS18730	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DSJ_RS18745	COG3493	citrate carrier protein
DSJ_RS18845	COG1061	Type III restriction enzyme res subunit
DSJ_RS18920	COG4372	Transposase
DSJ_RS18925	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS18990	COG2501	S4 domain
DSJ_RS18995	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DSJ_RS19005	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DSJ_RS19015	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DSJ_RS19020	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DSJ_RS19025	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
DSJ_RS19030	COG4181	ATPase activity
DSJ_RS19035	COG4181	ATPase activity
DSJ_RS19040	COG2755	lipolytic protein G-D-S-L family
DSJ_RS19045	COG0300	oxidoreductase activity
DSJ_RS19050	COG3118	belongs to the thioredoxin family
DSJ_RS19055	COG0330	HflC and HflK could
DSJ_RS19060	COG1585	Membrane protein implicated in regulation of membrane protease activity
DSJ_RS19075	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
DSJ_RS19145	COG4695	Portal protein
DSJ_RS19285	COG2217	Heavy metal translocating P-type atpase
DSJ_RS19290	COG3735	TraB family
DSJ_RS19295	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DSJ_RS19310	COG0737	Belongs to the 5'-nucleotidase family
DSJ_RS19315	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DSJ_RS19315	COG4651	solute:proton antiporter activity
DSJ_RS19320	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DSJ_RS19325	COG0563	adenylate kinase activity
DSJ_RS19330	COG0326	Molecular chaperone. Has ATPase activity
DSJ_RS19335	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DSJ_RS19340	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DSJ_RS19350	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DSJ_RS19355	COG2832	Protein of unknown function (DUF454)
DSJ_RS19370	COG1309	transcriptional regulator
DSJ_RS19375	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DSJ_RS19380	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DSJ_RS19385	COG0254	rRNA binding
DSJ_RS19390	COG0257	Belongs to the bacterial ribosomal protein bL36 family
DSJ_RS19395	COG0803	Belongs to the bacterial solute-binding protein 9 family
DSJ_RS19400	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DSJ_RS19405	COG1121	(ABC) transporter
DSJ_RS19435	COG3695	enzyme binding
DSJ_RS19445	COG3126	Type III secretion system lipoprotein chaperone (YscW)
DSJ_RS19450	COG1946	Acyl-CoA thioesterase
DSJ_RS19455	COG0004	ammonium transporteR
DSJ_RS19460	COG0347	Belongs to the P(II) protein family
DSJ_RS19465	COG1132	(ABC) transporter
DSJ_RS19470	COG1132	(ABC) transporter
DSJ_RS19490	COG0824	Thioesterase
DSJ_RS19495	COG1555	photosystem II stabilization
DSJ_RS19500	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DSJ_RS19505	COG0776	regulation of translation
DSJ_RS19530	COG0271	Belongs to the BolA IbaG family
DSJ_RS19535	COG3056	Lipoprotein
DSJ_RS19540	COG2223	nitrite transmembrane transporter activity
DSJ_RS19545	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DSJ_RS19550	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DSJ_RS19555	COG1845	cytochrome c oxidase, subunit III
DSJ_RS19560	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
DSJ_RS19565	COG0109	protoheme IX farnesyltransferase activity
DSJ_RS19570	COG2814	Major facilitator Superfamily
DSJ_RS19575	COG1666	GTP binding
DSJ_RS19580	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DSJ_RS19590	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DSJ_RS19590	COG0301	tRNA thio-modification
DSJ_RS19595	COG1722	exodeoxyribonuclease VII activity
DSJ_RS19600	COG0142	geranyltranstransferase activity
DSJ_RS19605	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DSJ_RS19610	COG0667	Aldo Keto reductase
DSJ_RS19620	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS19625	COG4372	Transposase
DSJ_RS19630	COG0667	Aldo Keto reductase
DSJ_RS19635	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DSJ_RS19640	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
DSJ_RS19645	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DSJ_RS19650	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
DSJ_RS19655	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DSJ_RS19655	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DSJ_RS19660	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DSJ_RS19665	COG4238	major outer membrane lipoprotein
DSJ_RS19670	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DSJ_RS19675	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DSJ_RS19680	COG1862	Preprotein translocase
DSJ_RS19685	COG0343	queuine tRNA-ribosyltransferase activity
DSJ_RS19690	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DSJ_RS19715	COG3021	interspecies interaction between organisms
DSJ_RS19720	COG0741	lytic transglycosylase activity
DSJ_RS19720	COG1388	LysM domain
DSJ_RS19725	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DSJ_RS19730	COG2226	methyltransferase
DSJ_RS19740	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DSJ_RS19750	COG1953	Uracil, thiamine, allantoin
DSJ_RS19785	COG1126	abc transporter atp-binding protein
DSJ_RS19790	COG0583	DNA-binding transcription factor activity
DSJ_RS19795	COG2072	flavoprotein involved in K transport
DSJ_RS19820	COG0583	DNA-binding transcription factor activity
DSJ_RS19860	COG0765	amino acid transport
DSJ_RS19870	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DSJ_RS19890	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
DSJ_RS19895	COG3344	reverse transcriptase
DSJ_RS19905	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
DSJ_RS19910	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DSJ_RS19915	COG0436	Aminotransferase
DSJ_RS19925	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
DSJ_RS19930	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
DSJ_RS19955	COG0121	glutamine amidotransferase
DSJ_RS19960	COG3034	peptidoglycan biosynthetic process
DSJ_RS19985	COG1172	Belongs to the binding-protein-dependent transport system permease family
DSJ_RS19990	COG1129	ABC transporter
DSJ_RS19995	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DSJ_RS20010	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS20015	COG4372	Transposase
DSJ_RS20020	COG2195	Cleaves the N-terminal amino acid of tripeptides
DSJ_RS20025	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
DSJ_RS20030	COG1073	alpha beta
DSJ_RS20040	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DSJ_RS20045	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DSJ_RS20050	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
DSJ_RS20105	COG2376	Dihydroxyacetone kinase
DSJ_RS20110	COG1461	Dihydroxyacetone kinase
DSJ_RS20115	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
DSJ_RS20115	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DSJ_RS20115	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DSJ_RS20140	COG3210	domain, Protein
DSJ_RS20175	COG0583	DNA-binding transcription factor activity
DSJ_RS20185	COG1278	Cold shock
DSJ_RS20190	COG0784	Response regulator, receiver
DSJ_RS20190	COG0835	chemotaxis
DSJ_RS20200	COG0513	Belongs to the DEAD box helicase family
DSJ_RS20210	COG0583	DNA-binding transcription factor activity
DSJ_RS20215	COG2807	transmembrane transport
DSJ_RS20225	COG2186	Transcriptional regulator
DSJ_RS20235	COG1764	response to oxidative stress
DSJ_RS20250	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DSJ_RS20260	COG3423	Transcriptional regulator
DSJ_RS20315	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS20320	COG4372	Transposase
DSJ_RS20410	COG4383	Mu-like prophage protein gp29
DSJ_RS20415	COG2369	cell adhesion
DSJ_RS20450	COG3299	homolog of phage Mu protein gp47
DSJ_RS20460	COG5301	cellulose 1,4-beta-cellobiosidase activity
DSJ_RS20495	COG1447	Phosphotransferase system cellobiose-specific component IIA
DSJ_RS20500	COG2723	6-phospho-beta-galactosidase activity
DSJ_RS20505	COG1609	Transcriptional regulator
DSJ_RS20535	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS20540	COG4372	Transposase
DSJ_RS20545	COG1609	Transcriptional regulator
DSJ_RS20555	COG1178	ABC-type Fe3 transport system permease component
DSJ_RS20560	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DSJ_RS20575	COG4297	protein containing double-stranded beta helix domain
DSJ_RS20585	COG1126	abc transporter atp-binding protein
DSJ_RS20590	COG0765	amino acid transport
DSJ_RS20605	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DSJ_RS20610	COG1473	amidohydrolase
DSJ_RS20615	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DSJ_RS20630	COG1473	amidohydrolase
DSJ_RS20685	COG0848	biopolymer transport protein
DSJ_RS20710	COG3485	protocatechuate 3,4-dioxygenase
DSJ_RS20715	COG3485	protocatechuate 3,4-dioxygenase
DSJ_RS20720	COG0583	DNA-binding transcription factor activity
DSJ_RS20725	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DSJ_RS20730	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DSJ_RS20735	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
DSJ_RS20740	COG1414	Transcriptional regulator
DSJ_RS20745	COG0626	cystathionine gamma-synthase activity
DSJ_RS20765	COG4372	Transposase
DSJ_RS20770	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS20785	COG2132	Multicopper oxidase
DSJ_RS20795	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DSJ_RS20810	COG3711	transcriptional antiterminator
DSJ_RS20815	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DSJ_RS20815	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DSJ_RS20815	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DSJ_RS20825	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DSJ_RS20825	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DSJ_RS20855	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
DSJ_RS20860	COG0187	DNA topoisomerase II activity
DSJ_RS20865	COG3150	esterase
DSJ_RS20870	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
DSJ_RS20875	COG3151	Protein conserved in bacteria
DSJ_RS20880	COG0494	nUDIX hydrolase
DSJ_RS20890	COG5463	Belongs to the UPF0441 family
DSJ_RS20895	COG0754	glutathionylspermidine amidase activity
DSJ_RS20900	COG3384	dioxygenase
DSJ_RS20905	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DSJ_RS20910	COG2960	long-chain fatty acid transporting porin activity
DSJ_RS20925	COG3025	triphosphatase activity
DSJ_RS20930	COG4991	sh3 domain protein
DSJ_RS20935	COG0617	tRNA 3'-terminal CCA addition
DSJ_RS20940	COG1968	undecaprenyl-diphosphatase activity
DSJ_RS20945	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DSJ_RS20960	COG0828	Belongs to the bacterial ribosomal protein bS21 family
DSJ_RS20965	COG0358	DNA primase activity
DSJ_RS20975	COG3663	DNA glycosylase
DSJ_RS21005	COG2337	Toxic component of a toxin-antitoxin (TA) module
DSJ_RS21035	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
DSJ_RS21045	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DSJ_RS21065	COG0840	transmembrane signaling receptor activity
DSJ_RS21070	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
DSJ_RS21075	COG0288	reversible hydration of carbon dioxide
DSJ_RS21080	COG0659	secondary active sulfate transmembrane transporter activity
DSJ_RS21085	COG2199	diguanylate cyclase activity
DSJ_RS21090	COG1181	Belongs to the D-alanine--D-alanine ligase family
DSJ_RS21105	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS21110	COG4372	Transposase
DSJ_RS21130	COG0840	transmembrane signaling receptor activity
DSJ_RS21150	COG4667	esterase of the alpha-beta hydrolase superfamily
DSJ_RS21155	COG0084	hydrolase, TatD family'
DSJ_RS21175	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
DSJ_RS21195	COG4372	Transposase
DSJ_RS21200	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS21300	COG0840	transmembrane signaling receptor activity
DSJ_RS21310	COG2203	Gaf domain
DSJ_RS21310	COG2199	diguanylate cyclase activity
DSJ_RS21320	COG3729	General stress protein
DSJ_RS21325	COG3685	Protein conserved in bacteria
DSJ_RS21330	COG3685	Protein conserved in bacteria
DSJ_RS21360	COG0702	epimerase
DSJ_RS21365	COG1733	regulation of RNA biosynthetic process
DSJ_RS21375	COG1294	oxidase, subunit
DSJ_RS21385	COG3708	Transcriptional regulator
DSJ_RS21385	COG2207	Transcriptional regulator
DSJ_RS21395	COG2375	cellular response to nickel ion
DSJ_RS21400	COG1695	Transcriptional regulator
DSJ_RS21410	COG1546	Belongs to the CinA family
DSJ_RS21415	COG0604	alcohol dehydrogenase
DSJ_RS21420	COG1982	Orn Lys Arg decarboxylase major
DSJ_RS21435	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS21440	COG4372	Transposase
DSJ_RS21460	COG3121	Chaperone
DSJ_RS21475	COG0488	(ABC) transporter
DSJ_RS21480	COG1349	DNA-binding transcription factor activity
DSJ_RS21490	COG0076	glutamate decarboxylase activity
DSJ_RS21495	COG3486	L-lysine 6-monooxygenase (NADPH) activity
DSJ_RS21510	COG1902	pentaerythritol trinitrate reductase activity
DSJ_RS21510	COG0446	pyridine nucleotide-disulphide oxidoreductase
DSJ_RS21515	COG2813	Specifically methylates the guanine in position
DSJ_RS21520	COG1451	nucleotide metabolic process
DSJ_RS21525	COG0038	chloride channel
DSJ_RS21530	COG0673	inositol 2-dehydrogenase activity
DSJ_RS21535	COG0861	Integral membrane protein TerC family
DSJ_RS21545	COG2721	sulfolactate sulfo-lyase activity
DSJ_RS21560	COG2271	Major facilitator Superfamily
DSJ_RS21570	COG0586	Pfam SNARE associated Golgi protein
DSJ_RS21580	COG1422	Protein of unknown function (DUF1090)
DSJ_RS21585	COG4575	ribosome binding
DSJ_RS21590	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
DSJ_RS21600	COG2259	Doxx family
DSJ_RS21620	COG0435	Glutathione S-transferase
DSJ_RS21630	COG4372	Transposase
DSJ_RS21635	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS21645	COG0814	amino acid
DSJ_RS21655	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
DSJ_RS21665	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DSJ_RS21670	COG3107	peptidoglycan biosynthetic process
DSJ_RS21675	COG0792	nuclease activity
DSJ_RS21685	COG2823	Periplasmic or secreted lipoprotein
DSJ_RS21690	COG1741	Belongs to the pirin family
DSJ_RS21695	COG0583	DNA-binding transcription factor activity
DSJ_RS21715	COG3964	amidohydrolase
DSJ_RS21760	COG1501	Belongs to the glycosyl hydrolase 31 family
DSJ_RS21765	COG2017	converts alpha-aldose to the beta-anomer
DSJ_RS21775	COG3684	Belongs to the aldolase LacD family
DSJ_RS21785	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DSJ_RS21790	COG1349	DNA-binding transcription factor activity
DSJ_RS21795	COG3783	Cytochrome b(562)
DSJ_RS21800	COG0312	modulator of DNA gyrase
DSJ_RS21815	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
DSJ_RS21820	COG0840	transmembrane signaling receptor activity
DSJ_RS21835	COG2707	UPF0756 membrane protein
DSJ_RS21845	COG2105	PFAM AIG2 family protein
DSJ_RS21850	COG2911	Protein conserved in bacteria
DSJ_RS21855	COG0729	surface antigen
DSJ_RS21860	COG1253	flavin adenine dinucleotide binding
DSJ_RS21870	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
DSJ_RS21885	COG0545	Peptidyl-prolyl cis-trans isomerase
DSJ_RS21890	COG3061	Opacity-associated protein A
DSJ_RS21895	COG4372	Transposase
DSJ_RS21900	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS21910	COG0359	binds to the 23S rRNA
DSJ_RS21915	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DSJ_RS21920	COG2965	DNA replication, synthesis of RNA primer
DSJ_RS21925	COG0360	Binds together with S18 to 16S ribosomal RNA
DSJ_RS21930	COG1073	alpha beta
DSJ_RS21935	COG0840	transmembrane signaling receptor activity
DSJ_RS21940	COG3650	response to hydrogen peroxide
DSJ_RS21945	COG1960	acyl-CoA dehydrogenase activity
DSJ_RS21950	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DSJ_RS21955	COG0557	exoribonuclease II activity
DSJ_RS21965	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DSJ_RS21970	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
DSJ_RS21975	COG0330	HflC and HflK could
DSJ_RS21980	COG0330	HflC and HflK could
DSJ_RS21985	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DSJ_RS21995	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DSJ_RS22000	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DSJ_RS22010	COG0802	atpase or kinase
DSJ_RS22015	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DSJ_RS22015	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DSJ_RS22020	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DSJ_RS22040	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
DSJ_RS22045	COG1162	GTPase activity
DSJ_RS22050	COG0688	phosphatidylethanolamine metabolic process
DSJ_RS22055	COG1511	domain protein
DSJ_RS22055	COG3264	Mechanosensitive ion channel
DSJ_RS22065	COG1438	arginine binding
DSJ_RS22090	COG1289	transmembrane transporter activity
DSJ_RS22095	COG1566	PFAM secretion protein HlyD family protein
DSJ_RS22105	COG0583	DNA-binding transcription factor activity
DSJ_RS22110	COG0312	modulator of DNA gyrase
DSJ_RS22115	COG3164	Protein of unknown function
DSJ_RS22120	COG1530	ribonuclease E activity
DSJ_RS22130	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
DSJ_RS22135	COG1792	Involved in formation and maintenance of cell shape
DSJ_RS22140	COG1077	Cell shape determining protein MreB Mrl
DSJ_RS22145	COG2199	diguanylate cyclase activity
DSJ_RS22145	COG2200	EAL domain
DSJ_RS22150	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DSJ_RS22160	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
DSJ_RS22165	COG0511	ligase activity, forming carbon-carbon bonds
DSJ_RS22170	COG0439	Biotin carboxylase
DSJ_RS22175	COG3924	membrane
DSJ_RS22180	COG4145	pantothenate transmembrane transporter activity
DSJ_RS22195	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
DSJ_RS22200	COG1126	abc transporter atp-binding protein
DSJ_RS22240	COG1739	Uncharacterized protein family UPF0029
DSJ_RS22245	COG0006	proline dipeptidase activity
DSJ_RS22255	COG0183	Belongs to the thiolase family
DSJ_RS22260	COG0543	2 iron, 2 sulfur cluster binding
DSJ_RS22275	COG0084	hydrolase, TatD family'
DSJ_RS22280	COG0805	protein transport
DSJ_RS22295	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
DSJ_RS22305	COG2226	methyltransferase
DSJ_RS22310	COG1322	Protein conserved in bacteria
DSJ_RS22320	COG0412	Dienelactone hydrolase
DSJ_RS22325	COG4372	Transposase
DSJ_RS22330	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS22340	COG0583	DNA-binding transcription factor activity
DSJ_RS22345	COG4807	Protein conserved in bacteria
DSJ_RS22355	COG2271	Major facilitator Superfamily
DSJ_RS22360	COG0561	phosphatase activity
DSJ_RS22365	COG4372	Transposase
DSJ_RS22370	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS22380	COG0561	phosphatase activity
DSJ_RS22385	COG2267	carboxylic ester hydrolase activity
DSJ_RS22390	COG1280	lysine exporter protein (LysE YggA)
DSJ_RS22395	COG1280	lysine exporter protein (LysE YggA)
DSJ_RS22410	COG2050	protein possibly involved in aromatic compounds catabolism
DSJ_RS22420	COG1733	regulation of RNA biosynthetic process
DSJ_RS22430	COG3180	Ammonia monooxygenase
DSJ_RS22440	COG3180	Ammonia monooxygenase
DSJ_RS22450	COG0210	DNA helicase
DSJ_RS22455	COG1011	Hydrolase
DSJ_RS22470	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
DSJ_RS22485	COG0181	hydroxymethylbilane synthase activity
DSJ_RS22495	COG2959	enzyme of heme biosynthesis
DSJ_RS22500	COG3071	HemY protein
DSJ_RS22510	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS22515	COG4372	Transposase
DSJ_RS22540	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
DSJ_RS22550	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DSJ_RS22555	COG2244	polysaccharide biosynthetic process
DSJ_RS22560	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
DSJ_RS22565	COG0456	acetyltransferase
DSJ_RS22570	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DSJ_RS22585	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DSJ_RS22590	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DSJ_RS22595	COG3118	belongs to the thioredoxin family
DSJ_RS22600	COG0513	Belongs to the DEAD box helicase family
DSJ_RS22605	COG0248	Ppx GppA phosphatase
DSJ_RS22615	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DSJ_RS22620	COG2982	Protein involved in outer membrane biogenesis
DSJ_RS22625	COG2200	EAL domain
DSJ_RS22630	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DSJ_RS22645	COG0612	Peptidase, M16
DSJ_RS22660	COG2200	EAL domain
DSJ_RS22660	COG2199	diguanylate cyclase activity
DSJ_RS22665	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
DSJ_RS22680	COG1215	transferase activity, transferring glycosyl groups
DSJ_RS22685	COG1215	transferase activity, transferring glycosyl groups
DSJ_RS22690	COG0489	protein tyrosine kinase activity
DSJ_RS22700	COG4608	Belongs to the ABC transporter superfamily
DSJ_RS22705	COG0444	Belongs to the ABC transporter superfamily
DSJ_RS22710	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DSJ_RS22715	COG0601	transmembrane transport
DSJ_RS22720	COG0747	negative chemotaxis
DSJ_RS22735	COG1764	response to oxidative stress
DSJ_RS22740	COG1846	Transcriptional regulator
DSJ_RS22760	COG0814	amino acid
DSJ_RS22765	COG2944	sequence-specific DNA binding
DSJ_RS22775	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
DSJ_RS22775	COG2213	PTS system mannitol-specific
DSJ_RS22785	COG3722	fumarate hydratase activity
DSJ_RS22795	COG2990	Protein conserved in bacteria
DSJ_RS22800	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DSJ_RS22815	COG0625	glutathione transferase activity
DSJ_RS22830	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS22835	COG4372	Transposase
DSJ_RS22840	COG0751	glycine-tRNA ligase activity
DSJ_RS22845	COG0752	glycyl-tRNA synthetase alpha subunit
DSJ_RS22850	COG3274	enterobacterial common antigen metabolic process
DSJ_RS22855	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DSJ_RS22860	COG2252	PERMEase
DSJ_RS22870	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DSJ_RS22875	COG0706	membrane insertase activity
DSJ_RS22885	COG0594	ribonuclease P activity
DSJ_RS22985	COG1192	Involved in chromosome partitioning
DSJ_RS23020	COG0484	heat shock protein binding
DSJ_RS23075	COG3774	pathogenesis
DSJ_RS23075	COG5539	protein K27-linked deubiquitination
DSJ_RS23140	COG4372	Transposase
DSJ_RS23145	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS23165	COG1525	nuclease
DSJ_RS23200	COG0484	heat shock protein binding
DSJ_RS23460	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DSJ_RS23540	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS23545	COG4372	Transposase
DSJ_RS23560	COG1192	Involved in chromosome partitioning
DSJ_RS23600	COG3344	reverse transcriptase
DSJ_RS23685	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS23710	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS23815	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS23820	COG4372	Transposase
DSJ_RS23835	COG4372	Transposase
DSJ_RS23840	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS23855	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DSJ_RS23860	COG1522	sequence-specific DNA binding
DSJ_RS23890	COG1388	LysM domain
DSJ_RS23890	COG1470	cell adhesion involved in biofilm formation
DSJ_RS23915	COG3023	N-Acetylmuramoyl-L-alanine amidase
DSJ_RS23920	COG1649	PFAM Uncharacterised BCR, COG1649
DSJ_RS23975	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS23980	COG4372	Transposase
DSJ_RS24010	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DSJ_RS24030	COG1028	Short-chain dehydrogenase reductase Sdr
DSJ_RS24080	COG3657	addiction module killer protein
DSJ_RS24105	COG3328	transposase activity
DSJ_RS24120	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
DSJ_RS24125	COG4305	rare lipoprotein A
DSJ_RS24145	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DSJ_RS24155	COG2165	general secretion pathway protein
DSJ_RS24185	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
DSJ_RS24225	COG2801	Transposase and inactivated derivatives
DSJ_RS24445	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DSJ_RS24445	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DSJ_RS24475	COG2135	peptidase activity
DSJ_RS24650	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DSJ_RS24655	COG3311	Transcriptional regulator
DSJ_RS24685	COG2801	Transposase and inactivated derivatives
DSJ_RS24715	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS24735	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS24740	COG4372	Transposase
DSJ_RS24770	COG4372	Transposase
DSJ_RS24775	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS24785	COG3344	reverse transcriptase
DSJ_RS24840	COG1192	Involved in chromosome partitioning
DSJ_RS24870	COG4372	Transposase
DSJ_RS24875	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS24890	COG3609	addiction module antidote protein, CC2985 family
DSJ_RS24955	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS24960	COG4372	Transposase
DSJ_RS25015	COG3023	N-Acetylmuramoyl-L-alanine amidase
DSJ_RS25035	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS25040	COG4372	Transposase
DSJ_RS25075	COG4372	Transposase
DSJ_RS25080	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS25135	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DSJ_RS25135	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DSJ_RS25140	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
DSJ_RS25240	COG4372	Transposase
DSJ_RS25245	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS25330	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS25335	COG4372	Transposase
DSJ_RS25355	COG3023	N-Acetylmuramoyl-L-alanine amidase
DSJ_RS25460	COG2801	Transposase and inactivated derivatives
DSJ_RS25470	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS25475	COG4372	Transposase
DSJ_RS25480	COG2801	Transposase and inactivated derivatives
DSJ_RS25570	COG2197	response regulator
DSJ_RS25600	COG1157	protein secretion by the type III secretion system
DSJ_RS25625	COG4794	Type iii secretion
DSJ_RS25635	COG4792	protein secretion
DSJ_RS25685	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
DSJ_RS25720	COG1366	Belongs to the anti-sigma-factor antagonist family
DSJ_RS25725	COG4372	Transposase
DSJ_RS25730	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS25740	COG0745	RESPONSE REGULATOR receiver
DSJ_RS25785	COG4999	Histidine kinase
DSJ_RS25785	COG3850	Histidine kinase
DSJ_RS25785	COG2205	protein histidine kinase activity
DSJ_RS25785	COG3437	response regulator, receiver
DSJ_RS25790	COG3250	beta-galactosidase activity
DSJ_RS25795	COG2233	PERMEase
DSJ_RS25800	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DSJ_RS25805	COG0778	Nitroreductase
DSJ_RS25810	COG2267	carboxylic ester hydrolase activity
DSJ_RS25815	COG0251	oxidation-reduction process
DSJ_RS25820	COG1335	isochorismatase
DSJ_RS25825	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DSJ_RS25830	COG1309	transcriptional regulator
DSJ_RS25835	COG1126	abc transporter atp-binding protein
DSJ_RS25840	COG0765	amino acid transport
DSJ_RS25845	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DSJ_RS25885	COG0431	NADPH-dependent FMN reductase
DSJ_RS25900	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DSJ_RS25905	COG2723	6-phospho-beta-galactosidase activity
DSJ_RS25925	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS25930	COG4372	Transposase
DSJ_RS25945	COG1605	Chorismate mutase
DSJ_RS25955	COG2076	Multidrug Resistance protein
DSJ_RS25960	COG2076	Multidrug Resistance protein
DSJ_RS25965	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
DSJ_RS25970	COG0726	polysaccharide deacetylase
DSJ_RS25975	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DSJ_RS25975	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DSJ_RS26015	COG2205	protein histidine kinase activity
DSJ_RS26025	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DSJ_RS26030	COG0840	transmembrane signaling receptor activity
DSJ_RS26040	COG0697	spore germination
DSJ_RS26060	COG0246	Mannitol dehydrogenase
DSJ_RS26075	COG1454	alcohol dehydrogenase
DSJ_RS26080	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DSJ_RS26100	COG1028	Short-chain dehydrogenase reductase Sdr
DSJ_RS26150	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS26155	COG4372	Transposase
DSJ_RS26160	COG0840	transmembrane signaling receptor activity
DSJ_RS26170	COG3141	response to X-ray
DSJ_RS26185	COG2916	Histone family protein nucleoid-structuring protein H-NS
DSJ_RS26205	COG3002	Belongs to the UPF0753 family
DSJ_RS26210	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DSJ_RS26215	COG0583	DNA-binding transcription factor activity
DSJ_RS26225	COG0024	Methionine aminopeptidase
DSJ_RS26230	COG3706	GGDEF domain
DSJ_RS26250	COG0561	phosphatase activity
DSJ_RS26260	COG1349	DNA-binding transcription factor activity
DSJ_RS26265	COG1609	Transcriptional regulator
DSJ_RS26270	COG1263	PTS System
DSJ_RS26270	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DSJ_RS26275	COG2723	6-phospho-beta-galactosidase activity
DSJ_RS26290	COG1349	DNA-binding transcription factor activity
DSJ_RS26295	COG2200	EAL domain
DSJ_RS26300	COG2200	EAL domain
DSJ_RS26325	COG0456	acetyltransferase
DSJ_RS26325	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DSJ_RS26330	COG1187	pseudouridine synthase activity
DSJ_RS26355	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS26395	COG1012	belongs to the aldehyde dehydrogenase family
DSJ_RS26400	COG0523	cobalamin synthesis protein
DSJ_RS26405	COG0747	negative chemotaxis
DSJ_RS26415	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DSJ_RS26420	COG1124	(ABC) transporter
DSJ_RS26430	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
DSJ_RS26455	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DSJ_RS26465	COG1280	lysine exporter protein (LysE YggA)
DSJ_RS26490	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DSJ_RS26495	COG1064	alcohol dehydrogenase
DSJ_RS26530	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
DSJ_RS26540	COG3182	Iron-regulated membrane protein
DSJ_RS26550	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DSJ_RS26555	COG2066	Belongs to the glutaminase family
DSJ_RS26585	COG2134	cdp-diacylglycerol pyrophosphatase
DSJ_RS26605	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
DSJ_RS26605	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
DSJ_RS26625	COG4565	transcriptional regulatory protein
DSJ_RS26630	COG3290	protein histidine kinase activity
DSJ_RS26645	COG4628	conserved protein (DUF2132)
DSJ_RS26650	COG0076	glutamate decarboxylase activity
DSJ_RS26655	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DSJ_RS26680	COG2203	Gaf domain
DSJ_RS26680	COG3706	GGDEF domain
DSJ_RS26680	COG4251	negative regulation of phosphorylation
DSJ_RS26680	COG5001	Diguanylate cyclase
DSJ_RS26685	COG0778	Nitroreductase
DSJ_RS26690	COG3842	ATPase activity
DSJ_RS26700	COG1175	transmembrane transport
DSJ_RS26705	COG0395	ABC-type sugar transport system, permease component
DSJ_RS26725	COG4232	protein-disulfide reductase activity
DSJ_RS26730	COG1794	racemase activity, acting on amino acids and derivatives
DSJ_RS26745	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS26750	COG4372	Transposase
DSJ_RS26770	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
DSJ_RS26795	COG1794	racemase activity, acting on amino acids and derivatives
DSJ_RS26810	COG2814	Major facilitator Superfamily
DSJ_RS26820	COG2175	clavaminate synthase activity
DSJ_RS26895	COG3436	PFAM IS66 Orf2 family protein
DSJ_RS26900	COG4372	Transposase
DSJ_RS26925	COG2807	transmembrane transport
DSJ_RS26965	COG3093	addiction module antidote protein HigA
DSJ_RS27070	COG3772	lysozyme
DSJ_RS27190	COG4386	tail sheath protein
DSJ_RS27245	COG5301	cellulose 1,4-beta-cellobiosidase activity
DSJ_RS27250	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1